BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780435|ref|YP_003064848.1| peptidase S11,
D-alanyl-D-alanine carboxypeptidase 1 [Candidatus Liberibacter
asiaticus str. psy62]
         (336 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254448546|ref|ZP_05062006.1| penicillin-binding protein 5 [gamma proteobacterium HTCC5015]
 gi|198261929|gb|EDY86214.1| penicillin-binding protein 5 [gamma proteobacterium HTCC5015]
          Length = 401

 Score =  247 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 164/344 (47%), Gaps = 9/344 (2%)

Query: 1   MRQFLVIIAMAMLS-----NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL+ IA+   S      +   +          + L+D  TG V++E+  D    PAS
Sbjct: 23  MKHFLLAIALFATSLFSFQAVAVPIPSPPQLNANSWILMDFATGKVLSEHNADERIEPAS 82

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT+YVV+  +      ++  + +S+ A     S    + G ++ L+  LK L+++S
Sbjct: 83  ITKIMTSYVVYQAIDSGLISMSDSVPVSEKAWRMKGSRMFIEVGKSVPLEALLKGLVIQS 142

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVA+AE +  TE+ F + MN  +K LG++ +HF+N+ G     HYTTARD+AILS 
Sbjct: 143 GNDAAVALAEYVGGTEEAFAEQMNAAAKALGMTGSHFVNSTGWPHADHYTTARDIAILSH 202

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +  D+P++   +  K       K PN N  +      DG+KTG T A+G+ + ASA + 
Sbjct: 203 ALIRDYPEHYRVYAEKNYTYNSIKQPNRNALLWRDSSVDGIKTGHTEAAGYCLAASARRD 262

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPN 291
           D  LI+V++G      R++ S +LL+ GF     RK             ++ ++ N    
Sbjct: 263 DMRLISVVMGTESSGARSQYSQTLLNYGFRYYETRKLYAAGASLNAPRVWKGSIENLPIG 322

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            + ++  T       N +               K T L     K
Sbjct: 323 PASDLYVTIPRGQYKNLKPSLDGVPNPLEAPVAKGTQLGTIRVK 366


>gi|326794762|ref|YP_004312582.1| beta-lactamase [Marinomonas mediterranea MMB-1]
 gi|326545526|gb|ADZ90746.1| Beta-lactamase [Marinomonas mediterranea MMB-1]
          Length = 382

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 9/345 (2%)

Query: 1   MRQFLVIIAMAMLS------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ + I+ +               +          Y L+D  TG V+ E        PA
Sbjct: 1   MKRLIGILLVFTSLFSIEVNAAPSLIPAPPQLSASSYILMDAYTGEVLVEQNSHKELPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMTAY+    +          + +S+ A     S    ++G+ + L++ ++ +I++
Sbjct: 61  SLTKLMTAYIADYEIARGNISYDDQVRVSEAAWRMKGSRMFIREGTRVKLEDLMRGIIIQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND +VA+AE +   E  FV  MN  ++ LG+  THF N+ G     HY++A D+A+LS
Sbjct: 121 SGNDASVAVAEHIAGAEGAFVDLMNQHAQLLGMKNTHFQNSTGFPAENHYSSAYDIALLS 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                 FP+    +  K       + PN N  +      DG+KTG T A+G+ + ASA++
Sbjct: 181 RAKILQFPESYKMYAEKYFTYNDIRQPNRNKLLWRDKTVDGLKTGHTQAAGYCLAASAVR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPN 291
               LI+V++G      R   S  L++ GF     RK  +              ++ V  
Sbjct: 241 NGTRLISVVMGTSSDEARATESQKLMNYGFRYYETRKLYSAGQVVNNAHVWGGATDSVKV 300

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              +           ++                   +L   I  +
Sbjct: 301 GFTDDVLVTMPRQQADSIPATLDLAPVIEAPISAGDVLGKVIVGQ 345


>gi|87119258|ref|ZP_01075156.1| D-alanyl-D-alanine carboxypeptidase [Marinomonas sp. MED121]
 gi|86165649|gb|EAQ66916.1| D-alanyl-D-alanine carboxypeptidase [Marinomonas sp. MED121]
          Length = 408

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 9/343 (2%)

Query: 1   MRQFLVIIAMAMLSNIFP------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++  ++ A  MLS +         +          Y LLD  TG V+ E+     + PA
Sbjct: 27  MKKPFILFAALMLSLVTSVYAAPTLIPAPPQLSATSYILLDAYTGEVLVEHNSRKEYPPA 86

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMTAY+V          L   + +S+ A     S    ++G+ + L++ ++ +I++
Sbjct: 87  SLTKLMTAYIVDYERNRGNIGLEDMVRVSEKAWRMEGSRMFIREGTKVNLEDLMRGIIIQ 146

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND +VA+AE +  +E  F   MN  ++ LG++ +HF+N+ G    GHY++A D+A+LS
Sbjct: 147 SGNDASVAVAEHIAGSEGAFADLMNQHAELLGMNNSHFVNSTGYPAEGHYSSAYDLAVLS 206

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                 FP     +  K       + PN N  +      DG+KTG T A+G+ + ASA++
Sbjct: 207 RAKIIQFPDSYPMYSEKYFTYNDIRQPNRNKLLWRDKTVDGLKTGHTEAAGYCLAASAVR 266

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPN 291
               LI+V++G      R   +  LL+ GF     RK  +      +       +  V  
Sbjct: 267 NGTRLISVVMGTKSDEARANETQKLLNYGFRYYETRKLYSRGQVINESKVWGGAAETVKI 326

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              +           +      +   +         +L   + 
Sbjct: 327 GFVDDVLVTIPRRQADAIPATLEISPTIQAPISAGDILGKIVV 369


>gi|254483505|ref|ZP_05096732.1| D-alanyl-D-alanine carboxypeptidase family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214036226|gb|EEB76906.1| D-alanyl-D-alanine carboxypeptidase family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 387

 Score =  242 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 90/343 (26%), Positives = 167/343 (48%), Gaps = 14/343 (4%)

Query: 1   MRQFLVIIAMAMLSN---IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M +F + + +A+          +          Y L+D N+G ++AE   D P  PASLT
Sbjct: 1   MIRFSLALFLALSIFGAQAATIVPSPPQIAAKAYLLVDANSGEILAEKNADMPLPPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLI 112
           K+MT+YV+ + + E +  L+  +T+S+NA    P          + G  +++D+  + ++
Sbjct: 61  KMMTSYVLATEIDEGRVALSDMVTVSENAWSQNPLFAGSSLMWIEPGKEVSIDDLQRGIV 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  VA+AE L  +E  F + MN+ ++ LG+  T+++N+HG+    H TTARD+A 
Sbjct: 121 ISSGNDATVAVAEHLAGSEAVFAEMMNSHAEKLGMIDTYYVNSHGLPDPDHVTTARDLAT 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           LS  +  + P++   ++ +       K  N N  +      DG+KTG+T  +G+ +VASA
Sbjct: 181 LSKAMIIEHPEHYAVYKEREFTYNNIKQYNRNSLLAEDPTVDGLKTGYTQEAGYCLVASA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI+V+LGA     R   + SLL+ GF      +      +    +    +V  +
Sbjct: 241 ERRGMRLISVVLGASSTRARKNETRSLLNYGFRFFETSELFEANQELDKPRIWKGQVDYV 300

Query: 293 SE------EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +        V   + +  +  T ++  +D E+     +++  +
Sbjct: 301 AVGILEETVVTLPRGKKKHLATNIELNQDIEAPVAVGDQLGTV 343


>gi|152996856|ref|YP_001341691.1| Serine-type D-Ala-D-Ala carboxypeptidase [Marinomonas sp. MWYL1]
 gi|150837780|gb|ABR71756.1| Serine-type D-Ala-D-Ala carboxypeptidase [Marinomonas sp. MWYL1]
          Length = 382

 Score =  242 bits (616), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 148/345 (42%), Gaps = 11/345 (3%)

Query: 1   MRQFLVIIAMAM------LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ L  +++        +      +          Y L+D  TG ++ E+  D    PA
Sbjct: 1   MKKLLATLSLVFCFVSGSVFAAPSLIPTPPQLSASSYILMDAYTGDILVEHNADQALPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMTAY++   L      L   + IS+ A     S    ++G+ + L++ ++ +I++
Sbjct: 61  SLTKLMTAYIIEYELARGNLSLDDKVNISEKAWRMEGSRMFIREGTQVKLEDLMRGIIIQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND +VA AE +  +E  F   MN  ++ LG++ +HF+NA G     HY++A D+A L+
Sbjct: 121 SGNDASVAAAEHIAGSESAFADLMNQHAQLLGMTNSHFVNATGFPAEDHYSSAHDIAKLA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                 FP+    +  K       + PN N  +      DGMKTG T A+GF + ASA++
Sbjct: 181 RATILQFPENYSMYAEKEFTYNNIRQPNRNKLLWRDKTVDGMKTGHTEAAGFCLAASAVR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVP 290
               LI V++G      R   S  LL  GF     RK  +          +    +N   
Sbjct: 241 NGTRLITVVMGTKSDTARAIESQKLLDYGFRYYETRKLYSRGQVVNNARVWGGTQANVKV 300

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +E+V  T       +        KE          +L   +  
Sbjct: 301 GFAEDVLVTMPRQQGESIPATLDMHKE-IMAPIAVGDVLGKIVVG 344


>gi|83648479|ref|YP_436914.1| D-alanyl-D-alanine carboxypeptidase [Hahella chejuensis KCTC 2396]
 gi|83636522|gb|ABC32489.1| D-alanyl-D-alanine carboxypeptidase [Hahella chejuensis KCTC 2396]
          Length = 386

 Score =  242 bits (616), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 93/343 (27%), Positives = 152/343 (44%), Gaps = 9/343 (2%)

Query: 1   MRQFLVIIAMAMLSNIFP----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR ++       +   +      +  A       Y L+D  +G +I E   +    PASL
Sbjct: 6   MRVYIAFFLCWAVGAAWADQASLIPSAPQIAASSYILMDAESGAIIVEKNSEERLPPASL 65

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT+YV+   + +          IS  A +   S    ++G+++ L + LK +I++S 
Sbjct: 66  TKMMTSYVLDYEVDQGNVSFNDEAPISVKAWKTGGSKMFVREGTSVRLGDLLKGIIIQSG 125

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND +VA+AE L  +E  F   MN  ++ LG+S T+F NA G+    HY++A D+A L+  
Sbjct: 126 NDASVAVAEFLAGSEDAFASMMNQHAQRLGMSNTNFANATGLPSENHYSSAHDLAKLAKA 185

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           I  DFP     +  K       + PN N  +      DG+KTG T  +G+ +V+SA++  
Sbjct: 186 IINDFPNQYPLYSEKYFTYNNIRQPNRNLLLWRDKSVDGLKTGHTEEAGYCLVSSAVRDG 245

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNI 292
             LI+V++GA     R + +  LL+ GF      K  +   K    D +  +       +
Sbjct: 246 MRLISVVMGAKSEEARARETLKLLNYGFRYFETHKLYSAGQKLVDSDIWAGSADTLPLGL 305

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           S+E+  T         +     DK       E    L     K
Sbjct: 306 SKEIVVTIPRGKKDALEATVDIDKV-IKAPIEVGAELGKLTVK 347


>gi|270160121|ref|ZP_06188777.1| D-alanyl-D-alanine carboxypeptidase DacC [Legionella longbeachae
           D-4968]
 gi|289165102|ref|YP_003455240.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Legionella longbeachae NSW150]
 gi|269988460|gb|EEZ94715.1| D-alanyl-D-alanine carboxypeptidase DacC [Legionella longbeachae
           D-4968]
 gi|288858275|emb|CBJ12143.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Legionella longbeachae NSW150]
          Length = 422

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/322 (29%), Positives = 155/322 (48%), Gaps = 9/322 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A       Y L+D N+G +IAE   +    PASLTK+MT YV+ + L  ++  LT  
Sbjct: 64  TPAAPILNAKAYILIDVNSGKIIAEKNSEERLPPASLTKMMTLYVISNALHHEQIHLTDN 123

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + +S+ A +   S    K+G  + +++ LK +IV S ND  VA+AE L  TE  F   MN
Sbjct: 124 VRVSREAWKIGGSRMFIKEGQQVPVEDLLKGIIVDSGNDACVAMAEHLGGTENSFTDLMN 183

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFPQY  +++ K     G +
Sbjct: 184 QQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALIIDFPQYYEWYKQKWFTYNGIR 243

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            PN N  +      DG+KTG T  +GF +V+SA + +  L+AV+LG    ++R   S  L
Sbjct: 244 QPNRNRLLWRDNQVDGIKTGHTNDAGFCLVSSAKRDNMRLLAVVLGEPTDSSRADDSEKL 303

Query: 260 LSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEA 313
           L+ GF      +             Y+  +      ++E+  +     +    N   K  
Sbjct: 304 LNYGFRFFETHQLYKSGQSIAELPLYKGQIDKVAVGLNEDQYITIPTGQYQRLNITTKIP 363

Query: 314 KDKESHFIDFEKITLLKNKITK 335
              E      +K   + + + +
Sbjct: 364 SYLE---APIKKGDKIGDLVVQ 382


>gi|296107091|ref|YP_003618791.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila 2300/99
           Alcoy]
 gi|295648992|gb|ADG24839.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila 2300/99
           Alcoy]
          Length = 407

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 9/323 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + LK  +  L  
Sbjct: 48  TTPAAPLLNAKAYILIDVNSGKVIAEKNSEEKLPPASLTKMMTLYVISNALKSGQIHLND 107

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A +   S    K+G  +++++ LK +IV S ND  VA+AE L  +E  F   M
Sbjct: 108 LVRVSRDAWQTGGSRMFIKEGDQVSVEDLLKGIIVDSGNDACVAMAEHLGGSENAFTDIM 167

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFP+Y  +++ K     G 
Sbjct: 168 NQQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALILDFPEYYDWYKQKWFTYNGI 227

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           + PN N  +      DG+KTG T  +G+ +V+SA + +  L+AV+LG    + R   S  
Sbjct: 228 RQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSDSVRADDSEK 287

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKE 312
           LL+ GF      +             Y+         ++E+  +     +    N   K 
Sbjct: 288 LLNYGFRFFETHQLYKSGQSIAELPLYKGTSDKVAVGLTEDQFITIPAGQYERLNISTKI 347

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
           + D +      +K   + + I +
Sbjct: 348 SNDLQ---APIKKGDKVGDIIVQ 367


>gi|52841739|ref|YP_095538.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628850|gb|AAU27591.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 430

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 9/323 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + LK  +  L  
Sbjct: 71  TTPAAPLLNAKAYILIDVNSGKVIAEKNSEEKLPPASLTKMMTLYVISNALKSGQIHLND 130

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A +   S    K+G  +++++ LK +IV S ND  VA+AE L  +E  F   M
Sbjct: 131 MVRVSRDAWQTGGSRMFIKEGDQVSVEDLLKGIIVDSGNDACVAMAEHLGGSENAFTDIM 190

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFP+Y  +++ K     G 
Sbjct: 191 NQQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALILDFPEYYDWYKQKWFTYNGI 250

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           + PN N  +      DG+KTG T  +G+ +V+SA + +  L+AV+LG    + R   S  
Sbjct: 251 RQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSDSVRADDSEK 310

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKE 312
           LL+ GF      +             Y+         ++E+  +     +    N   K 
Sbjct: 311 LLNYGFRFFETHQLYKSGQSIAELPLYKGTSDKVAVGLTEDQFITIPAGQYERLNISTKI 370

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
           + D +      +K   + + I +
Sbjct: 371 SNDLQ---APIKKGDKVGDIIVQ 390


>gi|254496461|ref|ZP_05109338.1| D-alanyl-D-alanine carboxypeptidase [Legionella drancourtii LLAP12]
 gi|254354317|gb|EET12975.1| D-alanyl-D-alanine carboxypeptidase [Legionella drancourtii LLAP12]
          Length = 413

 Score =  239 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 97/322 (30%), Positives = 157/322 (48%), Gaps = 9/322 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + L  ++  LT  
Sbjct: 55  TPAAPILNAKAYILIDVNSGKVIAEKNSEERLPPASLTKMMTLYVISNALHHEQIHLTDS 114

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + +SK+A +   S    K+G  + +++ LK +IV S ND  VA+AE +  TE  F   MN
Sbjct: 115 VRVSKDAWKIGGSRMFIKEGQQVPVEDLLKGIIVDSGNDACVAMAEHIGGTENSFTDIMN 174

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFPQY  +++ K     G +
Sbjct: 175 QQAQNLGMQNSHFTDSTGLPDPNLYTTAKDLAILGRALIVDFPQYYDWYKQKWFTYNGIR 234

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            PN N  +      DG+KTG T  +GF +V+SA + +  L+AV+LG  + ++R   S  L
Sbjct: 235 QPNRNRLLWRDNQVDGLKTGHTSEAGFCLVSSAKRENMRLLAVVLGEPNDSSRADDSEKL 294

Query: 260 LSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEA 313
           L+ GF      +             Y+  +      ++E+  +     +    N   K  
Sbjct: 295 LNYGFRFFETHQLYKSGQSVTELPLYKGAVDKISIGLNEDQFITIPTGQYQRLNISTKVP 354

Query: 314 KDKESHFIDFEKITLLKNKITK 335
              E      +K   + + + +
Sbjct: 355 SFLE---APIKKGDKIGDLVVQ 373


>gi|54297421|ref|YP_123790.1| hypothetical protein lpp1466 [Legionella pneumophila str. Paris]
 gi|53751206|emb|CAH12617.1| hypothetical protein lpp1466 [Legionella pneumophila str. Paris]
          Length = 430

 Score =  239 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 9/323 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + LK  +  L  
Sbjct: 71  TTPAAPLLNAKAYILIDVNSGKVIAEKNSEEKLPPASLTKMMTLYVISNALKSGQIHLND 130

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A +   S    K+G  +++++ LK +IV S ND  VA+AE L  +E  F   M
Sbjct: 131 MVRVSRDAWQTGGSRMFIKEGDQVSVEDLLKGIIVDSGNDACVAMAEHLGGSENAFTDIM 190

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFP+Y  +++ K     G 
Sbjct: 191 NQQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALILDFPEYYDWYKQKWFTYNGI 250

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           + PN N  +      DG+KTG T  +G+ +V+SA + +  L+AV+LG    + R   S  
Sbjct: 251 RQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSDSVRADDSEK 310

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKE 312
           LL+ GF      +             Y+         ++E+  +     +    N   K 
Sbjct: 311 LLNYGFRFFETHQLYKSGQSIAELPLYKGTSDKVAVGLTEDQFITIPAGQYERLNISTKI 370

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
           + D +      +K   + + I +
Sbjct: 371 SNDLQ---APIKKGDKVGDIIVQ 390


>gi|148359042|ref|YP_001250249.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila str.
           Corby]
 gi|148280815|gb|ABQ54903.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila str.
           Corby]
          Length = 430

 Score =  239 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 9/323 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + LK  +  L  
Sbjct: 71  TTPAAPLLNAKAYILIDVNSGKVIAEKNSEEKLPPASLTKMMTLYVISNALKSGQIHLND 130

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A +   S    K+G  +++++ LK +IV S ND  VA+AE L  +E  F   M
Sbjct: 131 LVRVSRDAWQTGGSRMFIKEGDQVSVEDLLKGIIVDSGNDACVAMAEHLGGSENAFTDIM 190

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFP+Y  +++ K     G 
Sbjct: 191 NQQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALILDFPEYYDWYKQKWFTYNGI 250

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           + PN N  +      DG+KTG T  +G+ +V+SA + +  L+AV+LG    + R   S  
Sbjct: 251 RQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSDSVRADDSEK 310

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKE 312
           LL+ GF      +             Y+         ++E+  +     +    N   K 
Sbjct: 311 LLNYGFRFFETHQLYKSGQSIAELPLYKGTSDKVAVGLTEDQFITIPAGQYERLNISTKI 370

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
           + D +      +K   + + I +
Sbjct: 371 SNDLQ---APIKKGDKVGDIIVQ 390


>gi|254491459|ref|ZP_05104638.1| beta-lactamase, putative [Methylophaga thiooxidans DMS010]
 gi|224462937|gb|EEF79207.1| beta-lactamase, putative [Methylophaga thiooxydans DMS010]
          Length = 382

 Score =  239 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 89/326 (27%), Positives = 143/326 (43%), Gaps = 5/326 (1%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +        A       Y L D ++G V+AE   D    PAS+TKLMT+YVV   L    
Sbjct: 22  AGAIAPKPSAPNVAAKAYVLTDYDSGRVLAEENADERLPPASITKLMTSYVVSHELHAGN 81

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   + IS+ A     S S  +  + ++++  L+ +IV+S ND AVA+AE +  +E+ 
Sbjct: 82  IQLDDEVLISEKAWRMVGSRSFIEVNTKVSVEALLRGMIVQSGNDAAVALAEHIAGSEET 141

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F Q MN  ++ LG+  T++ NA G+    HYTTARD+A+LS  +  DFP +  ++  K  
Sbjct: 142 FAQMMNQYAQQLGMYGTNYRNATGLPDPDHYTTARDIAVLSAALIRDFPAHYEWYSEKEY 201

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N N  +      DG+KTG T  +G+ + ASA +    LI+V+LG    N R 
Sbjct: 202 TYNDITQHNRNKLLWRDNSVDGLKTGHTEEAGYCLAASAKRSGMRLISVVLGTRSENARA 261

Query: 254 KVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
           + +  L + GF      +             ++         +  ++  T      Y   
Sbjct: 262 QETQKLFNYGFRFFETHQLYQANVGVTESKVWKGKQDIVELGLPTDLSVTVPRG-QYENL 320

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
           +     ++      E    L     +
Sbjct: 321 VASTNLEQPIIAPIEVGAKLGEVEIR 346


>gi|307610210|emb|CBW99765.1| hypothetical protein LPW_15321 [Legionella pneumophila 130b]
          Length = 430

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 9/323 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + LK  +  L  
Sbjct: 71  TTPAAPLLNAKAYILIDVNSGKVIAEKNSEEKLPPASLTKMMTLYVISNALKSGQIHLND 130

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A +   S    K+G  +++++ LK +IV S ND  VA+AE L  +E  F   M
Sbjct: 131 MVRVSRDAWQTGGSRMFIKEGDQVSVEDLLKGIIVDSGNDACVAMAEHLGGSENAFTDIM 190

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFP+Y  +++ K     G 
Sbjct: 191 NQQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALILDFPEYYDWYKQKWFTYNGI 250

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           + PN N  +      DG+KTG T  +G+ +V+SA + +  L+AV+LG    + R   S  
Sbjct: 251 RQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSDSVRADDSEK 310

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKE 312
           LL+ GF      +             Y+         ++E+  +     +    N   K 
Sbjct: 311 LLNYGFRFFETHQLYKSGQSIAELPLYKGTSDKVAVGLTEDQFITIPAGQYERLNISTKI 370

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
           + D +      +K   + + I +
Sbjct: 371 SNDLQ---APIKKGDKVGDIIVQ 390


>gi|54294448|ref|YP_126863.1| hypothetical protein lpl1517 [Legionella pneumophila str. Lens]
 gi|53754280|emb|CAH15757.1| hypothetical protein lpl1517 [Legionella pneumophila str. Lens]
          Length = 430

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 95/329 (28%), Positives = 158/329 (48%), Gaps = 9/329 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           ++        A       Y L+D N+G VIAE   +    PASLTK+MT YV+ + LK  
Sbjct: 65  ITTKPFTTPAAPLLNAKAYILIDVNSGKVIAEKNSEEKLPPASLTKMMTLYVISNALKSG 124

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L   + +S++A +   S    K+G  +++++ LK +IV S ND  VA+AE L  +E 
Sbjct: 125 QIHLNDMVRVSRDAWQTGGSRMFIKEGDQVSVEDLLKGIIVDSGNDACVAMAEHLGGSEN 184

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   MN  ++NLG+  +HF ++ G+     YTTA+D+AIL   +  DFP+Y  +++ K 
Sbjct: 185 AFTDIMNQQAQNLGMKNSHFTDSTGLPDPNLYTTAKDLAILGRALILDFPEYYDWYKQKW 244

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G + PN N  +      DG+KTG T  +G+ +V+SA + +  L+AV+LG    + R
Sbjct: 245 FTYNGIRQPNRNRLLWRDSQVDGIKTGHTNDAGYCLVSSAKRNNMRLLAVVLGEPSESVR 304

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINY 306
              S  LL+ GF      +             Y+         ++E+  +     +    
Sbjct: 305 ADDSEKLLNYGFRFFETHQLYKSGQSIAELPLYKGTSDKVAVGLTEDQFITIPAGQYERL 364

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNKITK 335
           N   K + D +      +K   + + I +
Sbjct: 365 NISTKISNDLQ---APIKKGDKVGDIIVQ 390


>gi|92113673|ref|YP_573601.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chromohalobacter
           salexigens DSM 3043]
 gi|91796763|gb|ABE58902.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Chromohalobacter salexigens DSM 3043]
          Length = 359

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 83/316 (26%), Positives = 140/316 (44%), Gaps = 3/316 (0%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +  A       + L+D ++G ++ E+  D    PASLTK+MTAY+V   +          
Sbjct: 2   VPSAPELAASAWVLMDADSGKILVEHNADKELPPASLTKMMTAYIVEREIDAGNISGDDE 61

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            TIS+NA     S      GS +++DN L+ ++++S ND +VA+AE +  +E  F   MN
Sbjct: 62  ATISENAWRTGGSRMFLNPGSKVSIDNLLRGVVIQSGNDASVALAEHIAGSEDAFADLMN 121

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +  + L  THFMN  G+    HY++A D+A+++  I  D+P +   +  K       +
Sbjct: 122 QQAARMKLEHTHFMNPTGLPHEEHYSSAHDLAVIAQHIIKDYPDHYEVYSEKYFTWNDIR 181

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            PN N  +      DG+KTG T A+G+ +VASA +    L+AV++G      R + +  L
Sbjct: 182 QPNRNRLLWRDPNVDGLKTGHTEAAGYCLVASAKKDGTRLVAVVMGTDSDEARAQETQKL 241

Query: 260 LSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           LS GF     ++                  +E+     +           +    +   +
Sbjct: 242 LSYGFRFFETQRLYESGAVLNTPRIWGGEKDELRLGVADDVYLTVPRGRSDELSAQLDIR 301

Query: 317 ESHFIDFEKITLLKNK 332
           E+          L   
Sbjct: 302 ETIEAPVSAGDRLGTL 317


>gi|307544791|ref|YP_003897270.1| serine-type D-Ala-D-Ala carboxypeptidase [Halomonas elongata DSM
           2581]
 gi|307216815|emb|CBV42085.1| serine-type D-Ala-D-Ala carboxypeptidase [Halomonas elongata DSM
           2581]
          Length = 419

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 10/327 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +          + L+D  +G VIA++ PD    PASLTKLMTAY+V   L +        
Sbjct: 58  IPAPPRLAATSWILMDAGSGRVIAQHNPDERLPPASLTKLMTAYLVERELNKGNISPDDL 117

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + +S+ A     S    + G  + +   L  +I+ S ND +VA+AE L    + F   MN
Sbjct: 118 VPVSEKAWRTGGSKMFIEVGDRVPVSELLHGIIIVSGNDASVAMAEYLAGGTEPFADIMN 177

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +  LG+  THF+N  G+    HY++ARD+A+LS  I  D+P++   ++ K     G  
Sbjct: 178 QHAARLGMENTHFVNPTGLPHDNHYSSARDLALLSRHIINDYPKHYSMYRQKHFTYGGID 237

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            PN N  +      DG+KTG+T A+G+ +V+SA + D  LI+V++G      R + S  L
Sbjct: 238 QPNRNSLLWRDSSVDGLKTGWTEAAGYCLVSSAKREDMRLISVVMGTDSAEARVQESQKL 297

Query: 260 LSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEV--CTTQKEIINYNTQMKEA 313
           LS GF      +  +          +  + +     + E V     +        ++   
Sbjct: 298 LSYGFRYFETLRLYDKGAVLNTSRVWGGDKNELKIGVDENVFMTVPRDRNEELTAKLDIR 357

Query: 314 KDKESHFIDFEKITL----LKNKITKK 336
           +D  +     + +      L +++  K
Sbjct: 358 QDLTAPIAAGDTVGTMEVRLGDEVVGK 384


>gi|217968699|ref|YP_002353933.1| beta-lactamase [Thauera sp. MZ1T]
 gi|217506026|gb|ACK53037.1| Beta-lactamase [Thauera sp. MZ1T]
          Length = 375

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 160/338 (47%), Gaps = 5/338 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR  + ++      +               + L+D  TG  +AE   D    PASLTKLM
Sbjct: 1   MRFLIAVLVSLFSLSALAQTVPPPALAAKAWALVDHATGQTLAEKDADARIEPASLTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+ FS LKE        + +S  A     S    +    +++D  ++ +IV+S ND  
Sbjct: 61  TAYITFSKLKEGSLKPDQVVPVSTKAWRMEGSRMFIEPNKPVSVDELIRGVIVQSGNDAC 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  +E+ F   MN  ++ LG++ THF N+ G+     YT+ARD+A+L+  I  D
Sbjct: 121 VALAETIAGSEEAFAALMNREAQRLGMTNTHFTNSTGLPDPQLYTSARDLAVLASAIVRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+Y   + +K     G K PN N  +      DGMKTG T ++G+ +V++A +G++ L+
Sbjct: 181 FPEYYGLYSLKEFTYNGIKQPNRNRLLYMDPSVDGMKTGHTSSAGYCLVSTARRGERRLV 240

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
           +V+LGA   + R + S  LL+ G+      K  +          ++  L+      +++ 
Sbjct: 241 SVVLGAASDSVRAQESLKLLNFGYQFYETVKLYSADEALSKFRVWKGKLNELPVGFTKDF 300

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             T  +      Q+   + ++      ++   +     
Sbjct: 301 ALTVPKEAANKIQVSL-ESRQPLVAPLQRGQEVGTLTV 337


>gi|330887942|gb|EGH20603.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 401

 Score =  235 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 94/342 (27%), Positives = 158/342 (46%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++A+ +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVALIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|327482406|gb|AEA85716.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas stutzeri DSM 4166]
          Length = 385

 Score =  235 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 153/337 (45%), Gaps = 9/337 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++ +A        L  A       Y L+D  +G V+ E+  D    PASLTKLMTAY+
Sbjct: 13  LTLLTVAPTVWAAQILPSAPQLAAKSYMLMDAASGEVLVEHNGDERLPPASLTKLMTAYI 72

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
               +++ +      +T+S+ A     S    +  + +++D+ L  +I++S ND +VA+A
Sbjct: 73  ATLEIQKGQISDNDMVTVSEKAWRTGGSRMFIQVNTQVSVDDLLHGIIIQSGNDASVAMA 132

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E+ F   MN+T++ LG+S THF+NA G+    HY++A DMA L+  I  + P +
Sbjct: 133 EHIAGSEEAFADMMNSTAQRLGMSNTHFVNATGLPHPEHYSSANDMAKLARAIIYEDPAH 192

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              +  K       K PN N  +      DG+KTG T  +G+ +VASA++ +  LI+V+ 
Sbjct: 193 YAIYAQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCLVASAVRDNMRLISVVF 252

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE------EVCT 298
           G      R   +  LL+ GF     R       +    Q    +   +         +  
Sbjct: 253 GTDSEQARAAETQKLLTYGFRFFETRTFYQKGTELAEAQVWKGQQSKLKAGLAQDLTMTL 312

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            + ++      M       +     ++  ++     K
Sbjct: 313 PRGQVEKLQAVMSFN---GTLTAPIQQGDVIGKVEVK 346


>gi|146284089|ref|YP_001174242.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas stutzeri A1501]
 gi|145572294|gb|ABP81400.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas stutzeri A1501]
          Length = 385

 Score =  235 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 153/337 (45%), Gaps = 9/337 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++ +A        L  A       Y L+D  +G V+ E+  D    PASLTKLMTAY+
Sbjct: 13  LTLLTVAPTVWAAQILPSAPQLAAKSYMLMDAASGEVLVEHNGDERLPPASLTKLMTAYI 72

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
               +++ +      +T+S+ A     S    +  + +++D+ L  +I++S ND +VA+A
Sbjct: 73  ATLEIQKGQISDNDMVTVSEKAWRTGGSRMFIQVNTQVSVDDLLHGIIIQSGNDASVAMA 132

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E+ F   MN+T++ LG+S THF+NA G+    HY++A DMA L+  I  + P +
Sbjct: 133 EHIAGSEEAFADMMNSTAQRLGMSNTHFVNATGLPHPEHYSSANDMAKLARAIIYEDPAH 192

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              +  K       K PN N  +      DG+KTG T  +G+ +VASA++ +  LI+V+ 
Sbjct: 193 YAIYAQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCLVASAVRDNMRLISVVF 252

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE------EVCT 298
           G      R   +  LL+ GF     R       +    Q    +   +         +  
Sbjct: 253 GTDSEQARAAETQKLLTYGFRFFETRTFYQKGTELAEAQVWKGQQSKLKAGLAQDLTMTL 312

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            + ++      M       +     ++  ++     K
Sbjct: 313 PRGQVEKLQAVMSFN---GTLTAPIQQGDVIGKVEVK 346


>gi|94501220|ref|ZP_01307742.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacter sp. RED65]
 gi|94426647|gb|EAT11633.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacter sp. RED65]
          Length = 380

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 9/345 (2%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           MR      + +   +  +    +    +     Y L+D N+G V+ E+  D    PASLT
Sbjct: 1   MRVLIASFLFLFSTVTFSAPSIIPKPPSLAASSYILMDANSGEVLVEHNADKVLPPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KLMTA++ F  L      L   + +S  A +   S    ++G+T+ +++ L+ +I++S N
Sbjct: 61  KLMTAFIAFEELSYGNIALDEKVRVSVKAWKAEGSRMFIREGTTVPVEDLLRGIIIQSGN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D ++A+AE +  TE  F   MN  + +LG++ + F NA G+   GH+++ARDMA L+  I
Sbjct: 121 DASIAMAEHISGTESSFADIMNQYAVSLGMTNSQFKNATGLPSEGHHSSARDMATLARAI 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +  Q+   +  K  +    +  N N  +      DG+KTG T  +G+ +V+SA   D 
Sbjct: 181 IFNHKQHYPIYSEKKFKYNNIEQTNRNRLLFWNDKVDGLKTGHTEEAGYCLVSSAQDEDM 240

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNK------TDRKKINYIIKDFYQQNLSNEVPN 291
            LIAV++GA     R + S  LL+ GF           ++ +        QQ   N    
Sbjct: 241 RLIAVVMGANSERARARESNKLLTYGFRYFESHRLYESKESLQTTDVWLGQQETLNLGVK 300

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               +   + +  N + +    +  ++  ++  +   +K  +  K
Sbjct: 301 EGAYITIPRGQKGNLDVEFTIDEVIKAPVLEGMEFGRIKVSLDDK 345


>gi|90022977|ref|YP_528804.1| penicillin-binding protein 6 [Saccharophagus degradans 2-40]
 gi|89952577|gb|ABD82592.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Saccharophagus degradans 2-40]
          Length = 393

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 17/349 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           MR F+V +   +   +F     +          Y L+D +TG VI E+  D    PASLT
Sbjct: 5   MRSFVVCLLATICVPVFAAQVIVPAPPELSAKAYLLIDADTGKVIVESNADEVMEPASLT 64

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLI 112
           K+MT+Y+V   ++  +      + +S +A     S            S + + + L+ +I
Sbjct: 65  KMMTSYIVSEEIESGRLTEDALVLVSDDAWRRGGSASGSSTMFLDPRSEVRVIDLLRGVI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND ++A+A+ +   E  F   MN  ++ LG+++T+F NA G    GH TTARD+AI
Sbjct: 125 IQSGNDASIALAQHIAGDESAFADVMNQQAQLLGMNSTNFENATGWPAEGHVTTARDLAI 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L+  +  D P++   +  K  +  G   PN N  +      DGMKTG T ++G+ +VASA
Sbjct: 185 LARALVNDHPEHYALYSEKYFKYNGINQPNRNRLLFRDDSVDGMKTGHTESAGYCLVASA 244

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            Q D  LI+V+LG    + R + S  LLS GF         N          ++      
Sbjct: 245 KQDDMRLISVVLGTKSDSARTQDSQKLLSYGFRYYKTYTLYNEGEAISDARVWKGLTDKV 304

Query: 289 VPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              ++ +  V   +    +     +     E+         +L + + K
Sbjct: 305 SLTVNSDIEVTIPRGAHKSVKAVTRVDSIIEAPVAP---GQILGSLLLK 350


>gi|254427252|ref|ZP_05040959.1| D-alanyl-D-alanine carboxypeptidase family [Alcanivorax sp. DG881]
 gi|196193421|gb|EDX88380.1| D-alanyl-D-alanine carboxypeptidase family [Alcanivorax sp. DG881]
          Length = 386

 Score =  234 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 16/345 (4%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           MR    +F V    A+L       + A         +   Y L+D  +G VI E+  +  
Sbjct: 1   MRPQSFRFTVFALCALLGTALSLQAQAQMVPRAPQIEAKGYLLMDAASGQVIVEHNAEQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PASLTK+MTAY+V   L++          IS  A +   S    ++G+ + + + L+ 
Sbjct: 61  LPPASLTKMMTAYIVEEELQKGNISEKDMAPISVQAWQMGGSRMFVREGTRVPVGDLLRG 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +I++S ND +VA+AE +  +E  F   MN  +  LG+ ++HFMNA G     H+TTA+DM
Sbjct: 121 IIIQSGNDASVAMAEYIAGSEDAFADLMNQHANRLGMDSSHFMNATGWPAENHFTTAKDM 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           AIL+  I  DFP +   +  K     G    N N  +      DG+KTG T  +G+ +V+
Sbjct: 181 AILARAIVRDFPDHYDLYAKKEFTYNGITQQNRNLLLWRDPTVDGLKTGHTDEAGYCLVS 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLS 286
           SA + +  LIAV++G    + R + S  LL+ GF      K  +        D +     
Sbjct: 241 SAKKDNMRLIAVVMGTASESARARESQKLLTYGFRFFETYKAYSAGDVLDTVDVWMGKQD 300

Query: 287 NEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                ++E+  +   ++   N   ++      E+  ++ ++   L
Sbjct: 301 QLRLGLAEDLVLTIPRESHENLKAEISVTPQLEAPILEGQQYGTL 345


>gi|110834820|ref|YP_693679.1| D-alanyl-D-alanine-carboxypeptidase [Alcanivorax borkumensis SK2]
 gi|110647931|emb|CAL17407.1| D-alanyl-D-alanine-carboxypeptidase [Alcanivorax borkumensis SK2]
          Length = 386

 Score =  234 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 15/349 (4%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           MR    +F V+   A+    F  L+ A             Y L+D  +G +I E   D  
Sbjct: 1   MRPQSFRFTVLALFALFGTAFSLLAQAQMVPRAPQIDAKGYLLMDATSGQIIVERNADQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PASLTK+MTAY+  + L++          IS  A +   S    ++G+ + + + L+ 
Sbjct: 61  LPPASLTKMMTAYIAEAELQKGNISEKDMAPISVQAWQMGGSRMFVREGTRVPVGDLLRG 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +I++S ND +VA+AE +  +E  F   MN  +  LG+  +HFMNA G     H+TTA+DM
Sbjct: 121 IIIQSGNDASVAMAEYIAGSEDAFADLMNQHANRLGMDNSHFMNATGWPAENHFTTAKDM 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           AIL+  I  DFP +   +  K     G    N N  +      DG+KTG T  +G+ +V+
Sbjct: 181 AILARAIVRDFPDHYDLYAKKEFTYNGITQQNRNLLLWRDPSVDGLKTGHTDEAGYCLVS 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLS 286
           SA +    LIAV++G      R + S  LL+ GF      K  +        D +    +
Sbjct: 241 SAKKDGMRLIAVVMGTDSEGARARESQKLLTYGFRFFETYKAYSAGDVLDTVDVWMGEQN 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                ++E++  T     ++ +   E            +     +   +
Sbjct: 301 QLRLGLAEDLVLTIP-RESHESLKAEISVTPQLEAPIVEGQQYGSLTVR 348


>gi|146308809|ref|YP_001189274.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas mendocina
           ymp]
 gi|145577010|gb|ABP86542.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Pseudomonas mendocina ymp]
          Length = 386

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 88/336 (26%), Positives = 151/336 (44%), Gaps = 5/336 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL ++   +  +    +          Y L+D  +G V+ E+  D    PASLTKLMTAY
Sbjct: 13  FLGLLTAPLAWSSQQVVPAPPQLAATSYVLMDAASGQVLVESNGDQRLPPASLTKLMTAY 72

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    +   +   +  + +S+ A     S    + G  +++D+ L  +I++S ND ++AI
Sbjct: 73  IATLEINRGQIKESDMVRVSEKAWRKGGSKMFIEVGKEVSVDDLLHGIIIQSGNDASIAI 132

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E  F   MN  ++ LG+S THFMN+ G     HY++A DMA L+  I  + P 
Sbjct: 133 AEHIAGSEDAFADMMNTHAQRLGMSNTHFMNSTGWPDPEHYSSAHDMAKLARAIIYEDPA 192

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           +   ++ K     G K PN N  +      DG+KTG T  +G+ +VASA++  Q LIA +
Sbjct: 193 HYDIYKQKEFLWNGIKQPNRNLLLWRDSTVDGLKTGHTEEAGYCLVASAVRDGQRLIAAV 252

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTT 299
            G +    R      LL+ GF     R       +      ++         ++E++  T
Sbjct: 253 FGTVSEQARAAEVQKLLTYGFRFFESRTFYKKGTELAQATVWKGTTHQVKAGLAEDLTMT 312

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +      Q   + +        ++  ++     K
Sbjct: 313 LPKGQLEKLQASMSLN-PRLIAPIQQGDVIGKVEVK 347


>gi|66047588|ref|YP_237429.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63258295|gb|AAY39391.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 395

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 17  KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTK 76

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 77  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 136

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 137 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 197 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 257 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 317 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 357


>gi|104783763|ref|YP_610261.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Pseudomonas entomophila L48]
 gi|95112750|emb|CAK17478.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Pseudomonas entomophila L48]
          Length = 386

 Score =  232 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F     +          Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLPVLLLITPAAFAAEQMMPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLDIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA++E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMA+L+  I 
Sbjct: 128 ASVALSEHIAGSEDAFADMMNKTAGDLGMANSHFMNPTGLPNPEHYSSAHDMALLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 NEDPAHYAIYSQKEFYWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G     +R   +  LL+ GF     +       +      ++   +     ++ 
Sbjct: 248 LIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATNQVKAGLAN 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +      Q     +         K  ++     K
Sbjct: 308 DLTMTMPKGQLKRLQASMTMN-PQLTAPIAKGDVIGKVEVK 347


>gi|212638842|ref|YP_002315362.1| D-alanyl-D-alanine carboxypeptidase [Anoxybacillus flavithermus
           WK1]
 gi|212560322|gb|ACJ33377.1| D-alanyl-D-alanine carboxypeptidase [Anoxybacillus flavithermus
           WK1]
          Length = 387

 Score =  232 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 152/349 (43%), Gaps = 13/349 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-----TNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++F   +A+ +L      +   +       +     L++ +TG ++ E     P  PAS
Sbjct: 3   MKRFFYALAIVLLFVPIVSVHAEQPKVELATEARSAILIERDTGAILYEKNAHEPLPPAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  ++   + + K  L   +  S+ A+    S    + G  MT+D+ LK + + S
Sbjct: 63  MTKIMTMLLIMEAIDQGKLKLDERVRASEYAASMGGSQIFLEPGEEMTVDDLLKGIAIGS 122

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND +VA+AE +  +E+ FV  MN  ++ LGL  T F N  G+    HY+TA DMA+++ 
Sbjct: 123 GNDASVALAERIAGSEEAFVHLMNEKARQLGLKHTAFENTTGLPAKNHYSTAYDMAMMAK 182

Query: 176 RIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            +            +   ++    K     NTN  V  + G DG+KTG+T  + + + A+
Sbjct: 183 ELLKYDLITKYTGTYEDYLRENTDKKFWLVNTNRLVKFYPGVDGLKTGYTSEAKYCLTAT 242

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSN 287
           A +G+  +IAV+ GA     RN     +L   F +   +               +    +
Sbjct: 243 AKKGNMRVIAVVFGAPTPKARNAQITKMLDYAFSHYETKPLYKKGETITMLPVSKGKKKS 302

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                SE +    K+    +      K KE+     +K   L   + KK
Sbjct: 303 VAVVTSEPISVLLKKGEKSDAVKTTWKLKETVKAPVKKGDTLGTLVVKK 351


>gi|71736558|ref|YP_276518.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557111|gb|AAZ36322.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 395

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 17  KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTK 76

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 77  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 136

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 137 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 197 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 257 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 317 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 357


>gi|304310091|ref|YP_003809689.1| Penicillin-binding protein 5 precursor
           (D-ala-D-ala-carboxypeptidase) [gamma proteobacterium
           HdN1]
 gi|301795824|emb|CBL44023.1| Penicillin-binding protein 5 precursor
           (D-ala-D-ala-carboxypeptidase) [gamma proteobacterium
           HdN1]
          Length = 385

 Score =  232 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 83/341 (24%), Positives = 162/341 (47%), Gaps = 8/341 (2%)

Query: 4   FLVIIAMAMLSNIF-PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           F+  +  +  S      L          + L++ ++G V+ E+  D    PASLTK+MT+
Sbjct: 10  FIGALTASNASFAAETELPTPPQLAASSWILIEPSSGQVLVEHNADEQLPPASLTKMMTS 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YV    +KE  A     + +S+ A     S    + G+ + + + ++ +I++S ND +VA
Sbjct: 70  YVAADKIKEGLAGWDDEVLVSEKAWRMGGSKMFIRVGTQVKIRDLMRGIIIQSGNDASVA 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E+ F   MN T+K +G++ TH++NA G+    HYTTARD+AIL+  +  D P
Sbjct: 130 LAEHIAGSEESFADLMNQTAKRIGMTHTHYVNATGLPDPSHYTTARDLAILAQHVIFDHP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +    +  K       K PN N  +      DG+KTG T  +G+ +VASA +    L+AV
Sbjct: 190 EDYELYSEKEFLYNNIKQPNRNLLLWRDNSVDGIKTGHTKEAGYCLVASAKRDGMRLVAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCT 298
           ++       R   +  LL+ GF    + +  +        + +  +       + +++  
Sbjct: 250 VMNTNSEKARASETMKLLTYGFRFYENVRSYSAGEVLAAPEIWFGSTPTVKLGLDKDLVL 309

Query: 299 TQKEIINYNTQMK---EAKDKESHFIDFEKITLLKNKITKK 336
           T       + + +   +  + ++     +++ +++ ++  K
Sbjct: 310 TIPRGTQQDVKAELDYKPLELKAPIAKGQQLGVIRVRVKDK 350


>gi|257482223|ref|ZP_05636264.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289625781|ref|ZP_06458735.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289648433|ref|ZP_06479776.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298488990|ref|ZP_07007013.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|302185158|ref|ZP_07261831.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           syringae 642]
 gi|298156488|gb|EFH97585.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322699|gb|EFW78792.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330516|gb|EFW86495.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867177|gb|EGH01886.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330871065|gb|EGH05774.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330873695|gb|EGH07844.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330987605|gb|EGH85708.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 386

 Score =  232 bits (590), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|289675748|ref|ZP_06496638.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           syringae FF5]
 gi|330895583|gb|EGH27891.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330976833|gb|EGH76865.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 386

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKAYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|28871936|ref|NP_794555.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213968044|ref|ZP_03396190.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato T1]
 gi|301383639|ref|ZP_07232057.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato Max13]
 gi|302063161|ref|ZP_07254702.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato K40]
 gi|302131282|ref|ZP_07257272.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28855189|gb|AAO58250.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927387|gb|EEB60936.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tomato T1]
 gi|330873583|gb|EGH07732.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330963469|gb|EGH63729.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331014742|gb|EGH94798.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 386

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +    +        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPAAWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|331011314|gb|EGH91370.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 386

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|292490707|ref|YP_003526146.1| beta-lactamase [Nitrosococcus halophilus Nc4]
 gi|291579302|gb|ADE13759.1| Beta-lactamase [Nitrosococcus halophilus Nc4]
          Length = 382

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 4/336 (1%)

Query: 4   FLVIIAMAMLSNIFP-FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +L+++ M       P  +  A +     Y L D  TG V+AE   D    PAS+TKLMTA
Sbjct: 12  WLLLLFMGGTVWGQPLPIPAAPSLSAKAYILQDFATGQVLAEAQADQRVEPASITKLMTA 71

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YVVF+ LK     L   + IS+ A     S +  +  S ++++  L+ +I++S ND +VA
Sbjct: 72  YVVFAELKRGNIHLEDKVLISEKAWRTGGSRTFIEVDSRVSVETLLQGMIIQSGNDASVA 131

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  TE+ F   MN  ++ LG++ +HF+N+ G+    HY T RD+A L+  +  DFP
Sbjct: 132 LAEYVGGTEEIFATLMNQQAQALGMTGSHFVNSTGLPHENHYMTTRDIATLARALIRDFP 191

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y  ++  +          N N  +      DG KTG+T A+G+ +V+SA++    LIAV
Sbjct: 192 EYYGWYSEQEFTYNNITQYNRNVLLRRDPSVDGCKTGYTEAAGYCLVSSAMREGMRLIAV 251

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEEVCTT 299
           ++G      R + S +LL+ GF     R        +      Q  + E+     +    
Sbjct: 252 VMGTKGPKIRARESLALLNYGFRFYDTRSLYAAREPVTSARVWQGANKELSLGVADDLAV 311

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +   +       + ++       +   L   I K
Sbjct: 312 TLQRGRWQELSSSIQLQDPITAPITEGQRLGVVIVK 347


>gi|325276744|ref|ZP_08142459.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas sp. TJI-51]
 gi|324098127|gb|EGB96258.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas sp. TJI-51]
          Length = 386

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 153/341 (44%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F                Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLDIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA++E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMA+L+  I 
Sbjct: 128 ASVALSEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPDHYSSAHDMAVLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 NVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCMVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         +++
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATGQVKAGLAD 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +       +              K  ++     K
Sbjct: 308 DLTMTMPKG-QLKRLVATMTMNPQLTAPIAKGDVIGKVEVK 347


>gi|330969439|gb|EGH69505.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 386

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKAYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|330938277|gb|EGH41938.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 386

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +   ++        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPTVWAAEQMTPAAPQLAAKAYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|70732753|ref|YP_262516.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas fluorescens Pf-5]
 gi|68347052|gb|AAY94658.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas fluorescens Pf-5]
          Length = 385

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 7/340 (2%)

Query: 2   RQFLVIIAMAMLSNIFP--FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++  +++ + +    +    +          Y L+D ++G+V+ EN  D    PASLTKL
Sbjct: 8   KRLCLLVPLIITPAAWAVEAMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKL 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND 
Sbjct: 68  MTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDA 127

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VA++E +  +E  F   MN T+ +LG+S +HFMN  G+    HY++A DMA+L+  I  
Sbjct: 128 SVAVSEHIAGSEDAFADMMNKTATDLGMSNSHFMNPTGLPNPEHYSSAHDMAVLARAIIH 187

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    L
Sbjct: 188 EDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRL 247

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           IAV+ G      R   +  LL+ GF     +       +      ++         ++E+
Sbjct: 248 IAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGTELAQAQVWKGTTHQVKAGLAED 307

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  T  +            +         K  ++     K
Sbjct: 308 LTMTMPKGQLKKLAASMTMN-PQLIAPIAKGDVIGKVEVK 346


>gi|330959962|gb|EGH60222.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 386

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +    +        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPAAWAAEQMTPAAPQLAAKAYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|254281581|ref|ZP_04956549.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [gamma proteobacterium NOR51-B]
 gi|219677784|gb|EED34133.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [gamma proteobacterium NOR51-B]
          Length = 381

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 9/340 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +F++++  +        +    +     Y L+D ++G V+ E+  D    PASLTK+M
Sbjct: 1   MLRFVILMMFSTSVLASSVVPAPPSIAADGYLLMDFHSGEVLVEHNADDVLPPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKS 115
           TAY++   +   +  L+  + +S+ A    P+         + G T+T+    K +++ S
Sbjct: 61  TAYILAEEIDAGRLSLSDEVPVSRTAWSQNPTFRGSSLMWIEPGKTVTVGELEKGIVISS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VAIAE +  +E+ F   MN  ++ LG++ATH++N+HG+    H T+ARD+A L+ 
Sbjct: 121 GNDATVAIAEHIAGSEEAFAGMMNRYAEILGMTATHYVNSHGLPNSAHVTSARDLATLAA 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            I  D P+    ++            N N  +      DG+KTG+T  +G+ +VASA + 
Sbjct: 181 AIIRDHPERYKVYKQLSFTYNDITQYNRNHLLRDDPSVDGLKTGYTSVAGYGLVASAERD 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNI 292
              LI+V++G+    +R   + SLL+ GF      + +   +        + L + V   
Sbjct: 241 GMRLISVVMGSNSTRSRKAETRSLLNYGFRFYETVQPVVANVALASTRLWKGLDDAVAGG 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             E         +   ++    + E       +  ++   
Sbjct: 301 VLESSAMTIPRGSAQPEVVVTFN-EPIEAPLSRGDVIGEV 339


>gi|229592798|ref|YP_002874917.1| putative cell division-like protein [Pseudomonas fluorescens SBW25]
 gi|229364664|emb|CAY52594.1| putative cell division-related protein [Pseudomonas fluorescens
           SBW25]
          Length = 385

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 7/340 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++  ++I++ +    +    +  +       + L+D  +G+V+ E+  D    PASLTKL
Sbjct: 8   KRTCLLISLIITPAAWAVEMVPASPQLAAKSWVLMDAASGNVLVESNGDQRLPPASLTKL 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND 
Sbjct: 68  MTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDA 127

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VA+AE +  +E  F   MN T  +LG++ +HFMN  G+    HY++A DMAIL+  I  
Sbjct: 128 SVALAEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIR 187

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             P +   +  K       K PN N  +      DG+KTG T  +G+ +V+SA++  Q L
Sbjct: 188 VDPVHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGQRL 247

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           IAV+ G      R   +  LL+ GF     +       +      ++   S     ++E+
Sbjct: 248 IAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELATAPVWKGATSQVKAGLAED 307

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  T  +            +         K  ++     K
Sbjct: 308 LTLTMPKGQLKKLAASMTMN-PQLVAPIAKGDVIGKVEVK 346


>gi|237798412|ref|ZP_04586873.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021264|gb|EGI01321.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 386

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +    +        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPAAWAAEQMTPAAPQLAAKAYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFYETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|312963236|ref|ZP_07777720.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas fluorescens WH6]
 gi|311282502|gb|EFQ61099.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas fluorescens WH6]
          Length = 385

 Score =  231 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 7/340 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++  +++++ +    +    +  +       + L+D  +G+V+ EN  D    PASLTKL
Sbjct: 8   KRTCLLLSLIITPAAWAVEMVPASPQLAAKAWVLMDAASGNVLVENNGDQRLPPASLTKL 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND 
Sbjct: 68  MTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDA 127

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VA+AE +  +E  F   MN T  +LG++ +HFMN  G+    HY++A DMAIL+  I  
Sbjct: 128 SVALAEHIAGSEDAFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAIIR 187

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             P +   +  K       K PN N  +      DG+KTG T  +G+ +V+SA++  Q L
Sbjct: 188 VDPVHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCMVSSAVRDGQRL 247

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           IAV+ G      R   +  LL+ GF     +       +      ++   S     ++E+
Sbjct: 248 IAVVFGTNSEQARAAETQKLLTYGFRFFETQTFYQKGAELATAPVWKGATSQVKAGLAED 307

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  T  +            +         K  ++     K
Sbjct: 308 LTLTMPKGQLKKLAASMTMN-PQLVAPIAKGDVIGKVEVK 346


>gi|148549880|ref|YP_001269982.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida F1]
 gi|148513938|gb|ABQ80798.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida F1]
          Length = 403

 Score =  231 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F                Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 25  KRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 84

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +   + P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 85  LMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 144

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMA L+  I 
Sbjct: 145 ASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMATLARAII 204

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 205 NVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQR 264

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G     +R   +  LL+ GF     +       +      ++   S     +++
Sbjct: 265 LIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQIKAGLAD 324

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +      Q     +         K  ++     K
Sbjct: 325 DLTMTMPKGQLKRLQASMTMN-PQLTAPIAKGDVIGKVEVK 364


>gi|330953021|gb|EGH53281.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas syringae Cit 7]
          Length = 386

 Score =  231 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 156/342 (45%), Gaps = 8/342 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++ + +    +        A       Y L+D  +G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLLVPLIITPTGWAAEQMTPAAPQLAAKAYVLMDATSGNVLVENNGDQRLAPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+TIS+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLEIRRGQIGENDPVTISENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VAI+E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMAIL+  I 
Sbjct: 128 ASVAISEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMAILARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + P +   +  K     G K PN N  +      DG+KTG T  +G+ +V+SA++    
Sbjct: 188 HEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G      R   +  LL+ GF     +       +      ++         ++E
Sbjct: 248 LIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWKGTERQVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  T  +            +         K  ++     KK
Sbjct: 308 DLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKK 348


>gi|331005765|ref|ZP_08329124.1| D-alanyl-D-alanine carboxypeptidase [gamma proteobacterium
           IMCC1989]
 gi|330420402|gb|EGG94709.1| D-alanyl-D-alanine carboxypeptidase [gamma proteobacterium
           IMCC1989]
          Length = 386

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 91/340 (26%), Positives = 154/340 (45%), Gaps = 8/340 (2%)

Query: 2   RQFLVIIAMAMLSNIFP---FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           R  L I++ +++   +     +          Y L+DTNTG V+ E   D    PAS+TK
Sbjct: 6   RSVLFILSCSVVMLSYARPVIIPAPPQLAATAYFLMDTNTGRVLVEKNADMQLPPASMTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT+Y+V S ++         +TIS  A +   S    ++G+ +++ + L+ +I++S ND
Sbjct: 66  MMTSYIVSSEIERGSINPDDLVTISVKAWKKGGSKMFVREGTQVSIKDLLRGVIIQSGND 125

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+AE +  +E  F   MN  +  LG++ T F NA G    GH ++ RD+AIL   + 
Sbjct: 126 ASIALAEHIAGSEAAFADIMNQQAALLGMTNTVFKNATGWPADGHISSVRDLAILGQALI 185

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFP++   +  K     G   PN N  + T    DG+KTG T  +GF + AS+ +    
Sbjct: 186 KDFPEHYKLYSEKYFTYNGINQPNRNKLLFTDKSVDGIKTGHTEEAGFGLTASSERDGMR 245

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           L++V+ G    + R   S  LLS GF      K  +          ++         ++ 
Sbjct: 246 LVSVVTGTRSESARAAESQKLLSYGFRYYYTHKLYSKGDVVNTAVVWKGQQEEIKIGLTN 305

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           ++  T       + Q     D E       +   L N + 
Sbjct: 306 DIYLTVPRGSENDLQATVHID-EVIQAPIVQGQELGNVVV 344


>gi|15599194|ref|NP_252688.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa PAO1]
 gi|116052037|ref|YP_789120.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889720|ref|YP_002438584.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa LESB58]
 gi|254236891|ref|ZP_04930214.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa C3719]
 gi|254242683|ref|ZP_04936005.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa 2192]
 gi|296387449|ref|ZP_06876948.1| D-alanyl-D-alanine carboxypeptidase [Pseudomonas aeruginosa PAb1]
 gi|313109439|ref|ZP_07795399.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa 39016]
 gi|4887207|gb|AAD32234.1|AF147448_5 penicillin-binding protein 5 [Pseudomonas aeruginosa PAO1]
 gi|9950191|gb|AAG07386.1|AE004817_10 D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa PAO1]
 gi|115587258|gb|ABJ13273.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168822|gb|EAZ54333.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa C3719]
 gi|126196061|gb|EAZ60124.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa 2192]
 gi|218769943|emb|CAW25704.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa LESB58]
 gi|310881901|gb|EFQ40495.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa 39016]
          Length = 386

 Score =  230 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++     +  +     +          Y L+D  +G V+ EN  D    PASLTK
Sbjct: 8   KRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +      +T+S++A     S    K GS +++ + L  +I++S ND
Sbjct: 68  LMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E  F   MN T++ LGL+ +HFM+A G+    HY++ARDMA+L+  I 
Sbjct: 128 ASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPNPDHYSSARDMAVLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 YGEPSHYAIYAQKEFLWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           +IAV+ G      R   +  LL+ GF     R       +      ++ +       ++E
Sbjct: 248 MIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T         Q     +        ++  ++     K
Sbjct: 308 DLTMTLPRGQMQKLQASMVLE-PQLMAPIQQGQVIGKVEVK 347


>gi|254784818|ref|YP_003072246.1| penicillin-binding protein 6 [Teredinibacter turnerae T7901]
 gi|237684996|gb|ACR12260.1| penicillin-binding protein 6 [Teredinibacter turnerae T7901]
          Length = 390

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 90/338 (26%), Positives = 158/338 (46%), Gaps = 11/338 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +++     +     +          Y L+D +TG VI E+  D    PASLTK+MT+Y
Sbjct: 15  LFILVTPMAANASQVIIPAPPQLAATAYLLIDADTGKVIVEHNADEQLPPASLTKMMTSY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSAND 118
           +V   +   +   T  + +S +A     +         +  S + + + L+ +I++S ND
Sbjct: 75  IVSEEIYAGRLQETDLVRVSDDAWRRGGAKSGSSTMFLEARSEVPVIDMLRGVIIQSGND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+A+ +  +E+ F + MN  ++ LG++ +HF NA G    GH TTARD+AIL+  + 
Sbjct: 135 ASIALAQHIAGSEEAFAEIMNQQAQLLGMTNSHFRNATGWPAEGHLTTARDLAILAKALI 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            D P++   +  K  +  G   PN N  + T    DG+KTG T A+G+ +VASA +    
Sbjct: 195 NDHPKHYALYSEKHFKHNGISQPNRNKLLFTDNTVDGIKTGHTEAAGYCLVASAKRDGMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LI+V++GA   N R   S  LL+ GF      K  +   +      +  +    V  I  
Sbjct: 255 LISVVMGAKSENARAAESKKLLAYGFRYYQTHKLYSAGDELGSARVWGGDPKELVLTIDH 314

Query: 295 EV--CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           ++     +    N    ++   + E+     + +  LK
Sbjct: 315 DILATIPRGGAKNVKAAIETNANIEAPIAKHQPLGKLK 352


>gi|77166090|ref|YP_344615.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrosococcus oceani ATCC
           19707]
 gi|254435823|ref|ZP_05049330.1| D-alanyl-D-alanine carboxypeptidase family [Nitrosococcus oceani
           AFC27]
 gi|76884404|gb|ABA59085.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Nitrosococcus oceani ATCC 19707]
 gi|207088934|gb|EDZ66206.1| D-alanyl-D-alanine carboxypeptidase family [Nitrosococcus oceani
           AFC27]
          Length = 382

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 91/319 (28%), Positives = 151/319 (47%), Gaps = 3/319 (0%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +    +     Y L D  TG V+AE+  D    PAS+TKLMTAYVVF  LK+ +  L  
Sbjct: 28  PIPAPPSLSAKAYLLQDFATGRVLAESQADERIEPASITKLMTAYVVFKELKQGRIHLAD 87

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + IS+ A     S +  +  + + ++  +K +I++S ND +VA+AE +  TE+ F   M
Sbjct: 88  EVLISEKAWRTGGSRTFIEVNTRVPVETLIKGMIIQSGNDASVALAEHVGGTEEIFAALM 147

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG++ +HF+N+ G+    HY TARD+A L   I  DFP+Y  ++  +     G 
Sbjct: 148 NQQAQLLGMTGSHFVNSTGLPHSNHYMTARDIATLGRAIIRDFPKYYSWYSEQAFTYNGI 207

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              N N  +      DG KTG T ++G+ + +SA++    LIAV++G      R + S +
Sbjct: 208 TQYNRNLLLRRDSSVDGFKTGHTNSAGYCLASSAMRDGMRLIAVVMGTGSPKIRAQESLA 267

Query: 259 LLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           LL+ GF     R        + K    Q  + E+P    +  +   +   +       + 
Sbjct: 268 LLNYGFRFYDTRSIYAAKEAVTKVRVWQGANKELPLGLVDDLSVTLQRGRWEELSSSLRV 327

Query: 316 KESHFIDFEKITLLKNKIT 334
           + +      +   L     
Sbjct: 328 QNTITAPVTEGQNLGIVTV 346


>gi|152984820|ref|YP_001346496.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa PA7]
 gi|150959978|gb|ABR82003.1| D-ala-D-ala-carboxypeptidase [Pseudomonas aeruginosa PA7]
          Length = 386

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++     +  +     +          Y L+D  +G V+ EN  D    PASLTK
Sbjct: 8   KRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +      +T+S++A     S    K GS +++ + L  +I++S ND
Sbjct: 68  LMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E  F   MN T++ LGL+ +HFM+A G+    HY++ARDMA+L+  I 
Sbjct: 128 ASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPNPDHYSSARDMAVLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 YGEPSHYAIYAQKEFLWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           +IAV+ G      R   +  LL+ GF     R       +      ++ +       ++E
Sbjct: 248 MIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAE 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T         Q     +        ++  ++     K
Sbjct: 308 DLTMTLPRGQMQKLQASMVLE-PQLMAPIQQGQVIGKVEVK 347


>gi|26991483|ref|NP_746908.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida
           KT2440]
 gi|24986562|gb|AAN70372.1|AE016679_4 D-alanyl-D-alanine carboxypeptidase [Pseudomonas putida KT2440]
          Length = 386

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F                Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +   + P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMA L+  I 
Sbjct: 128 ASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMATLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 NVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G     +R   +  LL+ GF     +       +      ++   S     +++
Sbjct: 248 LIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQVKAGLAD 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +      Q     +         K  ++     K
Sbjct: 308 DLTMTMPKGQLKRLQASMTMN-PQLTAPIAKGDVIGKVEVK 347


>gi|300113196|ref|YP_003759771.1| beta-lactamase [Nitrosococcus watsonii C-113]
 gi|299539133|gb|ADJ27450.1| Beta-lactamase [Nitrosococcus watsonii C-113]
          Length = 389

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 3/320 (0%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +    +     Y L D  TG V+AE+  D    PAS+TKLMTAYVVF  LK+ +  L  
Sbjct: 35  PIPAPPSLSAKAYLLQDFATGRVLAEHQADERIEPASITKLMTAYVVFKELKQGRIHLAD 94

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + IS+ A     S +  +  + + ++  +K +I++S ND +VA+AE +  TE+ F   M
Sbjct: 95  EVLISEKAWRTGGSRTFIEVNTRVPVETLIKGMIIQSGNDASVALAEYVGGTEEIFAALM 154

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG++ +HF+N+ G+    HY TARD+A L   I  DFP+Y  ++  +     G 
Sbjct: 155 NQQAQLLGMTGSHFVNSTGLPHENHYMTARDIATLGRAIILDFPKYYDWYSEQAFTYNGI 214

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              N N  +      DG KTG T ++G+ + +SA++    LIAV++G      R + S +
Sbjct: 215 TQYNRNLLLRRDSSVDGFKTGHTNSAGYCLASSAMRDGMRLIAVVMGTGSPKIRMQESLA 274

Query: 259 LLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           LL+ GF     R        + K    Q  + E+P    +  +   +   +       + 
Sbjct: 275 LLNYGFRFYDTRSIYAAKEAVTKVRVWQGANKELPLGLTDDLSVTLQRGRWEELSSSVRV 334

Query: 316 KESHFIDFEKITLLKNKITK 335
           + +      +   L     +
Sbjct: 335 QNTITAPVSEGQNLGIVTVR 354


>gi|120555321|ref|YP_959672.1| Serine-type D-Ala-D-Ala carboxypeptidase [Marinobacter aquaeolei
           VT8]
 gi|120325170|gb|ABM19485.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Marinobacter aquaeolei VT8]
          Length = 391

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 9/337 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           R   ++ ++ ++S      +             + L+D  +G VI E+  +    PASLT
Sbjct: 12  RTLFLVFSLLLMSGQASAQAVLIPSPPQIAGSSWVLMDPLSGRVIMEHNSNERLPPASLT 71

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTAY+V   L E +  ++  + IS  A     S +  ++G+++++++ LK +I++S N
Sbjct: 72  KMMTAYIVERELDEGRISMSDMVPISVKAWRTEGSRTFVQEGTSVSVEDLLKGVIIQSGN 131

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  +E  FV  MN  ++ LG+  THF NA G+    H++TA D+A+L+  I
Sbjct: 132 DASVALAEFVAGSEGAFVDIMNQQAQLLGMKDTHFENATGLPSADHFSTAYDLAVLARHI 191

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             D+P+    +  K       + PN N  +      DG+KTG T  +G+ +VASA +G+ 
Sbjct: 192 IQDYPENYPLYAQKHFTYNNIRQPNRNSLLWRDDSVDGLKTGHTEEAGYCLVASAKRGET 251

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNIS 293
            LIA ++G      R +    +L+ GF      +      +      +          + 
Sbjct: 252 RLIATVMGTSSSEARAQEVQKMLNYGFRYFETERLFRAGQELMASRVWGGQADEVSVGMP 311

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           E+V  T         +     D        +    L 
Sbjct: 312 EDVYVTIPRGSREQLESVVDLDSV-IKAPIKVGDELG 347


>gi|313500782|gb|ADR62148.1| DacA [Pseudomonas putida BIRD-1]
          Length = 386

 Score =  229 bits (582), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F                Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLPVLLLITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +   + P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMA L+  I 
Sbjct: 128 ASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMATLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 NVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G     +R   +  LL+ GF     +       +      ++   S     +++
Sbjct: 248 LIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSQIKAGLAD 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +      Q     +         K  ++     K
Sbjct: 308 DLTMTMPKGQLKRLQASMTMN-PQLTAPIAKGDVIGKVEVK 347


>gi|170719804|ref|YP_001747492.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida W619]
 gi|169757807|gb|ACA71123.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida W619]
          Length = 386

 Score =  229 bits (582), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F     +          Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLPVLLMITPAAFAAEQMMPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLDIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E  F   MN T+ +LG+S +HFMN  G+    HY++A DMA L+  I 
Sbjct: 128 ASVALAEHIAGSEDAFADMMNKTAADLGMSNSHFMNPTGLPHPDHYSSAHDMATLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 NVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCMVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G     +R   +  LL+ GF     +       +      ++   S     +++
Sbjct: 248 LIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATSIVKAGLAD 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +      Q     +         K  ++     K
Sbjct: 308 DLTLTMPKGQMKRLQASMTMN-PQLTAPIAKGDVIGKVEVK 347


>gi|167035845|ref|YP_001671076.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida GB-1]
 gi|166862333|gb|ABZ00741.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas putida GB-1]
          Length = 386

 Score =  229 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 155/341 (45%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  + + + +    F                Y L+D ++G+V+ EN  D    PASLTK
Sbjct: 8   KRLCLPVLLMITPAAFAAEQMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLPPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAY+    ++  +     P+T+S+NA     S    K GS +T+ + L  +I++S ND
Sbjct: 68  LMTAYIATLDIRRGQIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA++E +  +E  F   MN T+ +LG++ +HFMN  G+    HY++A DMA L+  I 
Sbjct: 128 ASVALSEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPNPEHYSSAHDMATLARAII 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           T  P +   +  K       K PN N  +      DG+KTG T  +G+ +VASA++  Q 
Sbjct: 188 TVDPAHYAIYSQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQR 247

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LIAV+ G     +R   +  LL+ GF     +       +      ++         +++
Sbjct: 248 LIAVVFGTNSEQSRAAETQKLLTYGFRFFETQTFYQKGTELTQAPVWKGATGQIKAGLAD 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++  T  +      Q     +         K  ++     K
Sbjct: 308 DLTMTMPKGQLKRLQASMTMN-PQLTAPIAKGDVIGKVEVK 347


>gi|311109424|ref|YP_003982277.1| D-alanyl-D-alanine carboxypeptidase [Achromobacter xylosoxidans A8]
 gi|310764113|gb|ADP19562.1| D-alanyl-D-alanine carboxypeptidase DacC 2 [Achromobacter
           xylosoxidans A8]
          Length = 362

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 158/324 (48%), Gaps = 6/324 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A T     + ++D N+G  +A + PD    PASLTK+MTAYVVF+ L EK+  L  
Sbjct: 8   SAVPAPTIAAKAWIVMDVNSGQTLAASNPDMKVEPASLTKIMTAYVVFNALDEKRLTLEQ 67

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A     S    +    +T+D   + +IV+S ND +VA+AE++  +E  F   M
Sbjct: 68  TVPVSERAWRTGGSRMFIEPRKPVTVDELNQGMIVQSGNDASVALAEAVGGSEASFASLM 127

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  THFMNA G+    H T+ RD+AILS  + TD P + HY++ K       
Sbjct: 128 NQEAERLGMRNTHFMNATGLPDPQHMTSTRDLAILSSHLITDHPDHFHYYKQKSYTYNKI 187

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T ++G+ +V++A++GD+ ++ V++G     TR + S  
Sbjct: 188 TQPNRNRLLWADPSVDGMKTGHTDSAGYCLVSTAVRGDRRILVVVVGTDSEATRAEESLK 247

Query: 259 LLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEE---VCTTQKEIINYNTQMKE 312
           LL+  F N    K  +     I     +  +  V         +   + +  +     + 
Sbjct: 248 LLNWSFQNFDTVKLFDKSQPGIDARVWEGTAESVKLGPPNPVSIAVPRGKAGDLKPVAQR 307

Query: 313 AKDKESHFIDFEKITLLKNKITKK 336
                +     +++  L+  +  K
Sbjct: 308 TDPLIAPLAKGQQVGTLQFTLDGK 331


>gi|254780435|ref|YP_003064848.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040112|gb|ACT56908.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 336

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 336/336 (100%), Positives = 336/336 (100%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM
Sbjct: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA
Sbjct: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD
Sbjct: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI
Sbjct: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ
Sbjct: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK
Sbjct: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336


>gi|293602524|ref|ZP_06684970.1| D-alanyl-D-alanine carboxypeptidase DacA [Achromobacter piechaudii
           ATCC 43553]
 gi|292819286|gb|EFF78321.1| D-alanyl-D-alanine carboxypeptidase DacA [Achromobacter piechaudii
           ATCC 43553]
          Length = 394

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 6/324 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A T     + ++D N+G  +A + PD    PASLTK+MTAYVVF+ L+EK+  L  
Sbjct: 40  SAVPAPTIAAKAWIVIDVNSGQTLAASNPDMKVEPASLTKIMTAYVVFNALEEKRLTLEQ 99

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A     S    +    +T+D   + +IV+S ND +VA+AE++  +E  F   M
Sbjct: 100 TVPVSEHAWRTGGSRMFIEPRKPVTVDELNQGMIVQSGNDASVALAEAVGGSESAFAALM 159

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  THFMNA G+    H T+ RD+A LS  + TD P + HY++ K       
Sbjct: 160 NQEAERLGMKNTHFMNATGLPDPQHVTSTRDLATLSSHLITDHPDFFHYYKQKSYTYNKI 219

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T ++G+ +V++A++GD+ ++ V++G     TR + S  
Sbjct: 220 TQPNRNRLLWADPSVDGMKTGHTDSAGYCLVSTAMRGDRRILVVVVGTDSEATRAEESLK 279

Query: 259 LLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEE---VCTTQKEIINYNTQMKE 312
           LL+  F N    K  +     I     +  +  V     +   +   + +  +     + 
Sbjct: 280 LLNWSFQNFDTVKLFDKSQPGIDARVWEGTAENVKLGPPKPVSIAVPRGKAGDLKPVAQR 339

Query: 313 AKDKESHFIDFEKITLLKNKITKK 336
                +     +++  L+  +  K
Sbjct: 340 TDPLIAPLAKGQQVGTLQFTLDGK 363


>gi|302389828|ref|YP_003825649.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosediminibacter
           oceani DSM 16646]
 gi|302200456|gb|ADL08026.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosediminibacter
           oceani DSM 16646]
          Length = 390

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 10/345 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R+  ++  +  +S  F   +      K P   L+D  TG V+ E        PAS+TK+M
Sbjct: 11  RKIALLSLIFFISVNFTVYAQPLPEIKSPSAILIDAGTGTVLYEKNAHEKLEPASITKIM 70

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  V    +++ K  LT  + IS+ A +   S      G   TL+  LK + + SAND +
Sbjct: 71  TLLVALEAIEQGKVKLTDKVKISERAWKTGGSQVFLGPGEEQTLETLLKCITIASANDAS 130

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  + + FV+ MN+ +K LG++ T+F N HG+    HYTTA D+A++S  +   
Sbjct: 131 VAVAEYIGGSVEGFVKMMNDKAKALGMNNTNFTNPHGLSDPNHYTTAYDIALMSRELVKY 190

Query: 181 FP------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                    ++ Y +    E +     NTN  +G + G DG+KTGF   +G+    SA +
Sbjct: 191 PKFFEWSTVWIDYLEHTDKEREATMLANTNKLLGKYEGLDGLKTGFHAKAGYCFAGSAKR 250

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPN 291
           GD  LI+V+L +     R + +  LL  GF   +  +       + +   ++ +  EV  
Sbjct: 251 GDLRLISVVLNSPSSAERFEDTKKLLDYGFGRYSSVQVAKKNSVLKRLPVEKGVKKEVDV 310

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++ +  +   E           +  +  +    +   +   I ++
Sbjct: 311 VASDDLSILVEKGKEGAIKTRLELPDKIYAPVVRGQKVGKLIAEQ 355


>gi|77461187|ref|YP_350694.1| penicillin-binding protein 6 [Pseudomonas fluorescens Pf0-1]
 gi|77385190|gb|ABA76703.1| putative cell division-related protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 385

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 92/327 (28%), Positives = 149/327 (45%), Gaps = 5/327 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            +     +          Y L+D N+G+V+ EN  D    PASLTKLMTAY+    ++  
Sbjct: 21  AAFAAEMMPSPPQLAAKSYVLMDANSGNVLVENNGDQRLPPASLTKLMTAYIATLEIRRG 80

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +     P+T+S+NA     S    K GS +T+ + L  +I++S ND +VA+AE +  +E 
Sbjct: 81  QIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDASVAVAEHIAGSED 140

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   MN T  +LG++ THFMN  G+    HY++A DMAIL+  I  + P +   +  K 
Sbjct: 141 AFADLMNKTVADLGMTNTHFMNPTGLPNPEHYSSAHDMAILARAIIHEDPAHYAIYSQKE 200

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G K PN N  +      DG+KTG T  +G+ +V+SA++    LIAV+ G      R
Sbjct: 201 FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTNSEVAR 260

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              +  LL+ GF     +       +      ++   S     +++++  T  +      
Sbjct: 261 AAETQKLLTYGFRFFETQTFYQKGTELAQAPVWKGTTSQVKAGLAQDLTMTLPKGQLKKL 320

Query: 309 QMKEAKDKESHFIDFEKITLLKNKITK 335
                 +         K  ++     K
Sbjct: 321 AASMTMN-PQLTAPIAKGDVIGKVEVK 346


>gi|114330774|ref|YP_746996.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrosomonas eutropha
           C91]
 gi|114307788|gb|ABI59031.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Nitrosomonas eutropha C91]
          Length = 380

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 5/336 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+QF++ + + M            +     +TL D ++G  +A + P    +PASLTKLM
Sbjct: 8   MKQFILFLFLLMPVFPAWSQQPELSIAAKSFTLTDFHSGQTLASSNPHERLDPASLTKLM 67

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYVVFS LK+++  L   + +SK A     S    +    +T+D  +  +IV+S ND  
Sbjct: 68  TAYVVFSALKQERIKLDQVVPVSKKAWRMAGSRMFIEPNKPVTVDELIHGVIVQSGNDAC 127

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E   V  MN  +K LG+  THF N+ G+    HY+TA D+A+L+  I  D
Sbjct: 128 VALAELIAGSEDLLVHMMNEEAKRLGMHNTHFTNSTGLTHPDHYSTANDLALLAGAIIRD 187

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+Y   + ++     G    N N  + T    DGMKTG+T A+G+ +V SA +  + LI
Sbjct: 188 FPEYYPLYSLREYTYNGITQQNRNRLLWTDPNVDGMKTGWTEAAGYCLVTSAKRDHRRLI 247

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEV 296
           +V++G    N R+  S  LL+ GF                    ++   +      ++++
Sbjct: 248 SVVMGTASPNARSIESQRLLNYGFQFFDTAHPYKKNQPVANVQIWKGTQNKIKVGFNQDI 307

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  +           + ++      ++   +   
Sbjct: 308 YFSLPKG-KVEGVKARMEYRQPLIAPIDQGQEIGKV 342


>gi|149377633|ref|ZP_01895371.1| D-alanyl-D-alanine carboxypeptidase [Marinobacter algicola DG893]
 gi|149358106|gb|EDM46590.1| D-alanyl-D-alanine carboxypeptidase [Marinobacter algicola DG893]
          Length = 388

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 3/335 (0%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+++    ++     +  +       Y L+D  +G VI E        PASLTK+MTAY
Sbjct: 15  LLILLPAMPVAAQAVLIPSSPQIAASSYILMDPLSGRVIMEENSHERLPPASLTKMMTAY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L E +  L+  + IS NA     S +  K+G+ ++++N LK +I++S ND +VA+
Sbjct: 75  IVERELDEGRISLSDMVPISVNAWRTEGSRTFVKEGTEVSVENLLKGVIIQSGNDASVAL 134

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E  FV  MN  ++ LG++ + F NA G+    H++TA D+A+L+  I  D+P+
Sbjct: 135 AEYIAGSEGAFVDIMNQQAQILGMNESSFANATGLPAPDHFSTAYDLALLAKAIINDYPE 194

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               +  K       + PN N  +      DG+KTG T  +G+ +VASA + D  LIAV+
Sbjct: 195 NYPLYAQKHFTYNNIRQPNRNSLLWRDDSVDGLKTGHTEEAGYCLVASAKRNDTRLIAVV 254

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           +G    ++R +    +L+ GF      +       +++       S+ +     +     
Sbjct: 255 MGTDSTSSRAQEVQKMLNYGFRYYQSERLFRTGQELLEARVWGGASDSLSVGLTDDVYVT 314

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               + ++     +              L     K
Sbjct: 315 IPRGSRDSLESTVELDSVIKAPISMGDELGRVTVK 349


>gi|33591361|ref|NP_879005.1| putative penicillin-binding protein precursor [Bordetella pertussis
           Tohama I]
 gi|33599159|ref|NP_886719.1| putative penicillin-binding protein precursor [Bordetella
           bronchiseptica RB50]
 gi|33571003|emb|CAE40482.1| putative penicillin-binding protein precursor [Bordetella pertussis
           Tohama I]
 gi|33575205|emb|CAE30668.1| putative penicillin-binding protein precursor [Bordetella
           bronchiseptica RB50]
 gi|332380762|gb|AEE65609.1| putative penicillin-binding protein precursor [Bordetella pertussis
           CS]
          Length = 418

 Score =  227 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 5/318 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                 T     +  +D N+G V+A +  D    PASLTK+MTAYVVF+ L+EK+  L  
Sbjct: 64  AAVPVPTIAAKAWITVDVNSGQVLAASNADMKVEPASLTKIMTAYVVFNALQEKRLTLEQ 123

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A     S    +    +T+D   + +IV+S ND +VA+AE++  +E  F   M
Sbjct: 124 QVPVSEHAWRTGGSRMFIEPRKPVTVDELNQGMIVQSGNDASVALAEAVGGSESAFAALM 183

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  THFMN+ G+    H TTARD+A L+  + +D+P Y HY++ K       
Sbjct: 184 NQEAQRLGMRNTHFMNSTGLPDPQHVTTARDLATLAAHLISDYPDYYHYYKQKSYTYNKI 243

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T ++G+ +V++A++GD+ ++ V++GA    TR + S  
Sbjct: 244 TQPNRNRLLWADPSVDGMKTGHTDSAGYCLVSTAMRGDRRILTVLVGADSEATRAEESLK 303

Query: 259 LLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           LL+  F N    K  +     +    ++  + N        V            +    +
Sbjct: 304 LLNWSFQNFDTVKLYDQSQPGLDARVWEGKVENVKLGPPNPVWLAVPRGKAAEIKPVAQR 363

Query: 315 DKESHFIDFEKITLLKNK 332
             +       K   +   
Sbjct: 364 T-DPLVAPLTKGQQVGTL 380


>gi|258544105|ref|ZP_05704339.1| serine-type D-Ala-D-Ala carboxypeptidase [Cardiobacterium hominis
           ATCC 15826]
 gi|258520658|gb|EEV89517.1| serine-type D-Ala-D-Ala carboxypeptidase [Cardiobacterium hominis
           ATCC 15826]
          Length = 374

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 160/342 (46%), Gaps = 8/342 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R F +IIA      +F     A    +  Y L+D  +G  +     D    PAS+TKLM
Sbjct: 5   LRLFTLIIAAVYSGVVFAQ--AAPELPVKSYILMDAASGQTLVGKNADEKLPPASITKLM 62

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+V   L   K  + TPIT+S+NA +   S    +    + +++ L+ LIV+S ND A
Sbjct: 63  TAYLVVEALDSGKLTMETPITVSQNAYKQEGSRMFIEVNKQVRVEDLLQGLIVQSGNDAA 122

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE L  + + F   MN  +  LG+  TH+ N  G+    HYTTARD+AILS  I  D
Sbjct: 123 MALAEYLGGSTEGFTGMMNRKAAELGMKDTHYTNPTGLPDPQHYTTARDIAILSRHIIND 182

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            PQY HY+  K       K  N N  +      DG+KTG T  +G+ + +S  +GD   I
Sbjct: 183 HPQYYHYYGQKSYTYNKIKQDNRNRLLWRNASIDGLKTGHTKEAGYCLASSEKRGDIRFI 242

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS--NEVPNISE 294
           AV+LGA   + R   S +L + GF    +   +    K      Y+   +  N  P    
Sbjct: 243 AVVLGADKESDRYDASQALFNYGFAQFEEAVVLQAGQKLATAPVYKGKTNEVNVRPQHEV 302

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++     E       +       +   + +++  ++ +I  K
Sbjct: 303 KLLLPVGERSKAVAALDLQTPLVAPIREGQELGTIRIRIGDK 344


>gi|56477153|ref|YP_158742.1| putative penicillin-binding protein [Aromatoleum aromaticum EbN1]
 gi|56313196|emb|CAI07841.1| putative penicillin-binding protein [Aromatoleum aromaticum EbN1]
          Length = 401

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 5/336 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR F+V++   +          A T     + L+D  TG V+A   PD    PASLTKLM
Sbjct: 27  MRLFIVLLLALLAFPASAQNVPAPTLAAKSWLLMDHATGQVLAAQEPDARIEPASLTKLM 86

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+ F+ LK     L   + +S  A     S    +    +T+      +I++S ND  
Sbjct: 87  TAYLTFAALKNGTITLDQTVPVSNKAWRSEGSRMFIEPNRPVTVGELTSGMIIQSGNDAC 146

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE L  +E+ F   MN  ++ LG+  THF N+ G+     YTTARD+ +L+  I  D
Sbjct: 147 VALAELLAGSEEAFAHMMNAEAQRLGMKNTHFTNSTGLPDPQLYTTARDLGLLAAAIVRD 206

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+Y  Y+  K         PN N  +      DG+KTG T ++G+ +++SA +G + LI
Sbjct: 207 FPEYYRYYSQKEYTYNKITQPNRNRLLWLDTTVDGLKTGHTSSAGYCLISSAQRGPRRLI 266

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
           +V+LG      R + S  LL+ GF      K  +   +      ++    +       + 
Sbjct: 267 SVMLGTDSDTIRAQESLKLLNYGFQFHDTVKLYSADQELSRFQVWKGQADDVAVGFLGDF 326

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  +  +   +      ++      +K   +   
Sbjct: 327 VMSLPKGQSEKIEASLV-SQQPVIAPIQKGQPIGTL 361


>gi|107103514|ref|ZP_01367432.1| hypothetical protein PaerPA_01004584 [Pseudomonas aeruginosa PACS2]
          Length = 359

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 5/320 (1%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +          Y L+D  +G V+ EN  D    PASLTKLMTAY+    ++  +      
Sbjct: 2   VPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDL 61

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T+S++A     S    K GS +++ + L  +I++S ND +VA+AE +  +E  F   MN
Sbjct: 62  VTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMN 121

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
            T++ LGL+ +HFM+A G+    HY++ARDMA+L+  I    P +   +  K       K
Sbjct: 122 TTAQKLGLTNSHFMDATGLPNPDHYSSARDMAVLARAIIYGEPSHYAIYAQKEFLWNNIK 181

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            PN N  +      DG+KTG T  +G+ +VASA++  Q +IAV+ G      R   +  L
Sbjct: 182 QPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKL 241

Query: 260 LSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           L+ GF     R       +      ++ +       ++E++  T         Q     +
Sbjct: 242 LTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQASMVLE 301

Query: 316 KESHFIDFEKITLLKNKITK 335
                   ++  ++     K
Sbjct: 302 -PQLMAPIQQGQVIGKVEVK 320


>gi|88705586|ref|ZP_01103296.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Congregibacter litoralis KT71]
 gi|88700099|gb|EAQ97208.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Congregibacter litoralis KT71]
          Length = 372

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 89/332 (26%), Positives = 144/332 (43%), Gaps = 10/332 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M  +    +          Y L+D N+G V+ E+  D    PASLTKLMTAYV+ S ++ 
Sbjct: 1   MAVSAQNIVPAPPEVAARAYLLVDANSGAVLVESNADEQLPPASLTKLMTAYVLASEIEA 60

Query: 72  KKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
            +      +T+S+NA    P          +    +T+    + +++ S ND  VA+AE 
Sbjct: 61  GRVSRDDQVTVSRNAWSQNPVFNGSSLMWIEPRKPVTIGQLEQGVVISSGNDATVAVAEH 120

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E  F   MN  +  LGL  T+F N+HG+    H TTARD+A L+  I   FP++  
Sbjct: 121 IAGSEAAFADLMNKHAAELGLHGTYFANSHGLPHPQHLTTARDLATLAKNIIARFPEHYK 180

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            +  +       K  N N  +G     DG+KTG+T  +G+ +VASA +    LI+V++G 
Sbjct: 181 VYSQRDYTYNDIKQYNRNKLLGEDPSVDGLKTGYTREAGYGLVASAERNGMRLISVVMGT 240

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKD-FYQQNLSNEVPNISEEVCTTQKE 302
                R + + SLL+ GF        +     + K   ++         I+++V  T   
Sbjct: 241 ESTRARARETRSLLNYGFRFYETDVMVAGAEELEKPRVWKGVADYVSVGIADDVVMTLPR 300

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               N   +     +           L     
Sbjct: 301 GKRNNLVRELVLM-DPISAPLAVGDALGELTL 331


>gi|33594884|ref|NP_882527.1| putative penicillin-binding protein precursor [Bordetella
           parapertussis 12822]
 gi|33564960|emb|CAE39907.1| putative penicillin-binding protein precursor [Bordetella
           parapertussis]
          Length = 418

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 154/318 (48%), Gaps = 5/318 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                 T     +  +D N+G V+A +  D    PASLTK+MTAYVVF+ L+EK+  L  
Sbjct: 64  AAVPVPTIAAKAWITVDVNSGQVLAASNADMKVEPASLTKIMTAYVVFNALQEKRLTLEQ 123

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A     S    +    +T+D   + +IV+S ND +VA+AE++  +E  F   M
Sbjct: 124 QVPVSEHAWRTGGSRMFIEPRKPVTVDELNQGMIVQSGNDASVALAEAVGGSESAFAALM 183

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  THFMN+ G+    H TTARD+A L+  + +D+P Y HY++ K       
Sbjct: 184 NQEAQRLGMRNTHFMNSTGLPDPQHVTTARDLATLAVHLLSDYPDYYHYYKQKSYTYNKI 243

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T ++G+ +V++A++GD+ ++ V++GA    TR + S  
Sbjct: 244 TQPNRNRLLWADPSVDGMKTGHTDSAGYCLVSTAMRGDRRILTVLVGADSEATRAEESLK 303

Query: 259 LLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           LL+  F N    K  +     +    ++  + N        V            +    +
Sbjct: 304 LLNWSFQNFDTVKLYDQSQPGLDARVWEGKVENVKLGPPNPVWLAVPRGKAAEIKPVAQR 363

Query: 315 DKESHFIDFEKITLLKNK 332
             +       K   +   
Sbjct: 364 T-DPLVAPLTKGQQVGTL 380


>gi|114319338|ref|YP_741021.1| penicillin-binding protein 6 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225732|gb|ABI55531.1| penicillin-binding protein 6 [Alkalilimnicola ehrlichii MLHE-1]
          Length = 381

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 9/323 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A +     + L+D  +G V+AEN  D   +PASL K+MTAYVVFS L+E    L  
Sbjct: 27  PTPAAPSVGAAAHVLMDARSGQVLAENNADEARDPASLVKMMTAYVVFSELREGNIDLDE 86

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T+S+ A   P S    + G  + + + ++ +I++S ND  VA+AE +   E+ F Q M
Sbjct: 87  LVTVSERAWRTPGSRMFIEPGDNVRVGDLIRGVIIQSGNDACVALAEHIAGDEQTFAQVM 146

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N+ ++ LG+  T+F NA G+      TTARD A+L+  I  DFP+Y  ++  +       
Sbjct: 147 NSYAEQLGMENTYFANATGLPDEAMKTTARDTALLARAIVRDFPEYYGWYSERSFTWNDI 206

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  N N  +      DG+KTG T A+G+N+ ASA +    LI+V+LG      R   + S
Sbjct: 207 RQSNRNRLLWRDSSVDGLKTGHTSAAGYNLAASAEREGTRLISVVLGTASEQARADQTQS 266

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKE 312
           LL+ GF      +  +   +      ++ ++ +    I++E  V   +++  N   ++  
Sbjct: 267 LLNYGFRFFETHRLYDEGEELTRTRVWKGDMEDLGVGIADELYVTIPRRQYENLEARL-- 324

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
            +  E      E    +   I +
Sbjct: 325 -RLDEPLIAPIEAGQPVGRLIIR 346


>gi|330811926|ref|YP_004356388.1| cell division-related protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380034|gb|AEA71384.1| putative cell division-related protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 385

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 5/327 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            +     +          + L+D ++G V+ EN  D    PASLTKLMTAY+    ++  
Sbjct: 21  AAFAVEMMPAPPQLAAKSFVLMDASSGEVLVENNGDQRLPPASLTKLMTAYIATLEIRRG 80

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +     P+T+S+NA     S    K GS +T+ + L  +I++S ND +VA++E +  +E 
Sbjct: 81  QIGENDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGIIIQSGNDASVALSEHIAGSED 140

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   MN T  +LG++ +HFMN  G+    HY++A DMA+L+  I  + P +   +  K 
Sbjct: 141 AFADMMNKTVADLGMTNSHFMNPTGLPNPEHYSSAHDMALLARAIIHEDPAHYAIYSQKE 200

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G K PN N  +      DG+KTG T  +G+ +V+SA++    LIAV+ G      R
Sbjct: 201 FFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSAVRDGMRLIAVVFGTSSEVAR 260

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              +  LL+ GF     +       +      ++   +     +++++  T  +      
Sbjct: 261 AAETQKLLTYGFRFFETQTFYQKGTELAQAQVWKGTTNQVKAGLAQDLTMTLPKGQLKKL 320

Query: 309 QMKEAKDKESHFIDFEKITLLKNKITK 335
                 +         K  ++     K
Sbjct: 321 AASMTMN-PQLTAPIAKGDVIGKVEVK 346


>gi|187476650|ref|YP_784673.1| penicillin-binding protein [Bordetella avium 197N]
 gi|115421236|emb|CAJ47741.1| penicillin-binding protein [Bordetella avium 197N]
          Length = 419

 Score =  226 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 6/324 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A T     +  +D N+G V+A + PD    PASLTK+MTAYVVF+ L EK+  L  
Sbjct: 65  AAVPAPTIAARAWIAIDVNSGQVLAASNPDQKVEPASLTKVMTAYVVFNALDEKRLTLDQ 124

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A     S    +    +T+D  ++ +IV+S ND +VA+AE++  +E  F   M
Sbjct: 125 QVPVSQHAWRTGGSRMFIEPRKPVTVDELIQGMIVQSGNDASVALAEAVGGSETAFAALM 184

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  THFMNA G+    H TT RD+A L+  + +D P+Y HY++ KG      
Sbjct: 185 NEQAERLGMKGTHFMNATGLPDPQHITTVRDLATLATHLVSDHPEYYHYYKQKGFTYNKI 244

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T ++G+ ++++A++GD+ ++ V++GA    TR + S  
Sbjct: 245 TQPNRNRLLWADPSVDGMKTGHTDSAGYCLISTALRGDRRVLTVLVGADSEATRAEESLK 304

Query: 259 LLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEE---VCTTQKEIINYNTQMKE 312
           LL+  F N    K  +     +     +  +  V         +   + +        + 
Sbjct: 305 LLNWSFQNFDTVKLYDKSQPGLDARVWEGKAENVKLGPPNPVWLAVPRGKGNEIKPIAQR 364

Query: 313 AKDKESHFIDFEKITLLKNKITKK 336
                +     +++  L+  +  K
Sbjct: 365 TDPLVAPLAKGQQVGTLEFTLDGK 388


>gi|302390892|ref|YP_003826712.1| serine-type D-Ala-D-Ala carboxypeptidase [Acetohalobium arabaticum
           DSM 5501]
 gi|302202969|gb|ADL11647.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetohalobium arabaticum
           DSM 5501]
          Length = 386

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 6/339 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++I+ ++ L  +   +  A   +     L++  TG V+          PAS+TK+MT  
Sbjct: 10  IVIILVLSSLLVVASPVLAAFDIEAESAILMEAETGQVLFTKNVTEELPPASITKIMTLL 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    +   +  L   +  S+ AS    S         M ++  L+ + + SAND  VA+
Sbjct: 70  LAMEAIDSGQMNLDDTVIASEFASSMGGSQIYLAPKEKMKVETLLESIAIASANDACVAL 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDF 181
            E +  + + F++ MN  +  LGL  T+F+N+ G+      HY++ARD+AI+S  +    
Sbjct: 130 GEHIAGSYQNFIKMMNERASELGLKDTNFINSTGLPTDDGAHYSSARDIAIMSRELINKH 189

Query: 182 PQYMHYFQIKGLEI--KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           P+ + +  I   +I        NTN  +  + GADG+KTG+T  +G+ + A+A +    L
Sbjct: 190 PKVLDWTSIWIDKIRNGEFTLYNTNDLINYYPGADGLKTGWTDKAGYCLAATAKRDGMRL 249

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I+V++       R + SA LL+ GF     +K +         +    E   +  E    
Sbjct: 250 ISVVMKTDSEEARMEESAKLLNYGFSRFDLKKVVKQGEDVGKIEVKEGEELEVKVETAED 309

Query: 300 QKEIINYNTQM--KEAKDKESHFIDFEKITLLKNKITKK 336
            K ++  N +   +E + ++      EK  ++   I K+
Sbjct: 310 LKLVLKSNAEDLEREIELEKEVTAPIEKGEIVGKLIIKQ 348


>gi|154253549|ref|YP_001414373.1| Serine-type D-Ala-D-Ala carboxypeptidase [Parvibaculum
           lavamentivorans DS-1]
 gi|154157499|gb|ABS64716.1| Serine-type D-Ala-D-Ala carboxypeptidase [Parvibaculum
           lavamentivorans DS-1]
          Length = 384

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 91/347 (26%), Positives = 156/347 (44%), Gaps = 15/347 (4%)

Query: 1   MRQFL----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M +F+      +++A+ +   P  + A      Y  L+D  +G ++     D   +PAS+
Sbjct: 1   MNRFISATAFALSLALTAVALPRGAFAFETAAEYAVLMDYESGSILWGKNADEQMHPASM 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLL 111
           +KLMT  ++F  +++    L     +S+NA          S       + + +   L+ +
Sbjct: 61  SKLMTLDMLFGAIRDGSVSLDDEFKVSENAWRKGGAASGSSTMFADLNTVVPVHAILRGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV+S ND  +A AE+L  +E  F + +    K +GL+ ++F N+ G     H  TA D+A
Sbjct: 121 IVQSGNDACIATAEALSGSESAFAEALTERGKAIGLTNSNFTNSTGWPDEDHLMTAHDLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
           +L+  I  +FP++   F+       G K  N N A+      DG+KTG T ASG+ +VAS
Sbjct: 181 VLARHIIMEFPEFYPIFKETDFTWNGIKQGNRNPALYLDPSVDGLKTGHTEASGYGLVAS 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNE 288
           A +GDQ LI V+ G      R   S  LL  GF +    K              Q    E
Sbjct: 241 AKRGDQRLILVLNGLPSERARADESVRLLDWGFRSFKHYKLFTAGTPVENAPVWQGTYGE 300

Query: 289 VPNISE---EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           VP +S+   +V  + ++  N    +       +     ++I  ++ +
Sbjct: 301 VPLVSQTDIDVILSTEQRRNMKVSVLYDTPVAAPVAAGQRIGTIRIE 347


>gi|82703112|ref|YP_412678.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrosospira multiformis
           ATCC 25196]
 gi|82411177|gb|ABB75286.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Nitrosospira multiformis ATCC 25196]
          Length = 404

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNI------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           MR+ L I    +   +      F       +     Y L D  +G V+         +PA
Sbjct: 26  MRRLLPISLCLLALPLAAQQPQFHAPPQTLSVAAKSYILADLQSGQVLVSKNAHERVDPA 85

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMTAYVVF+ L +K+  LT  + +S  A     S    +    +T+D  ++ +IV+
Sbjct: 86  SLTKLMTAYVVFAALYQKRVTLTQAVPVSTRAWRAQGSRMFIEPKKPVTVDELMRGMIVQ 145

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND ++A+AE++  +E+ F Q MN  +  +G+  T F N+ G+    HYTTA D+A+L+
Sbjct: 146 SGNDASIALAEAVSGSEEAFAQAMNKEAARMGMKNTRFANSTGLPDPDHYTTAYDLALLA 205

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I  DFP+Y   + +K          N N  +      DGMKTG T A+G+ ++ SA +
Sbjct: 206 TAIIRDFPEYYPLYSLKEYTYNKITQANRNRLLWLDPNVDGMKTGHTDAAGYCLITSARR 265

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVP 290
           G + L+AV++G    + R   S  LL+ GF      +        +    ++ N      
Sbjct: 266 GQRRLVAVVMGTASESARAMESQRLLNYGFQFYDTVRLYPGEQEVVAIPLWKGNQDKLRT 325

Query: 291 NISEEV--CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               +V     + +      +M+  +   +     +K+  +K  +  K
Sbjct: 326 GFGNDVYFSLPRHQTDKLKARMEYKQPLLAPVAAGQKVGTVKFMLEGK 373


>gi|78485976|ref|YP_391901.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thiomicrospira crunogena
           XCL-2]
 gi|78364262|gb|ABB42227.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Thiomicrospira crunogena XCL-2]
          Length = 396

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 164/350 (46%), Gaps = 21/350 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL---------------SIAETNKLPYYTLLDTNTGHVIAEN 45
           M + L +        +                     A       Y L+D N+G +IA N
Sbjct: 1   MIKILGLFFTLFAIALPSAAKTVQSQPVAPIPHVVPSAPKTAAEAYILIDFNSGKIIASN 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
           +P+    PASLTK+MT YVV + L      L   +TIS  A + P S    + G  +++ 
Sbjct: 61  HPEMRVEPASLTKIMTGYVVINELANGNIHLDDMVTISPKAWKMPGSKMFIEVGKKVSVK 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           N +K ++++S ND +VA+AE +  +E+ F + MN  + +LG+  TH+MNA G+    HYT
Sbjct: 121 NLIKGMVIQSGNDASVALAEHIAGSEEVFAELMNKYAASLGMDGTHYMNATGLPNPDHYT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           TA+D++IL+  + T FP+   ++  K     G    N N  +      DG+KTG T ++G
Sbjct: 181 TAQDLSILARALITKFPEEYKWYAQKKFTFNGITQYNRNKLLWQDPSVDGLKTGHTESAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFY 281
           + +VASA + D  LI+V+LG     TR + S  LL+ GF      K  +   +      +
Sbjct: 241 YCLVASAKRDDMRLISVVLGTDGAKTRIQESQKLLNYGFRFFETHKLYDNGQRLNDARIW 300

Query: 282 QQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +    +    ++++  V   + +  N   +     +  +   + + +  L
Sbjct: 301 EGQKDSVGLGLTDDLYVTIPRGQYKNLKIESSIQPEIIAPIAEQKPLGKL 350


>gi|89092035|ref|ZP_01164990.1| D-ala-D-ala-carboxypeptidase [Oceanospirillum sp. MED92]
 gi|89083770|gb|EAR62987.1| D-ala-D-ala-carboxypeptidase [Oceanospirillum sp. MED92]
          Length = 387

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/333 (28%), Positives = 149/333 (44%), Gaps = 9/333 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++ +    +  +   +          Y ++D +TG VIA    D P+ PASLTK+MTAY
Sbjct: 14  LVLTLFAIQVHAVARLIPAEPQIAATAYLVMDADTGKVIASKNADKPFAPASLTKMMTAY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++   L +    L   + IS+ A     S    ++G+ + L + +K +I++S ND +VA+
Sbjct: 74  ILEYELSKGNVGLEDLVLISEKAWRTQGSRMFIREGTQVRLGDLMKGIIIQSGNDASVAV 133

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E  F   MN  +  LG+  T+F+NA G+   GH ++A D+A L+  I  DFP 
Sbjct: 134 AEHIAGSEPAFADLMNQHADLLGMKNTNFLNATGLPADGHESSAADLATLAKAIINDFPD 193

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               +  K       + PN N  +      DGMKTG+T A+G+ +VASA +    LI+V+
Sbjct: 194 LYSIYSEKYFTYNDIRQPNRNKLLWRDKTVDGMKTGYTDAAGYCLVASAKRDGMRLISVV 253

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISE--EVC 297
           LG  D   R + S  LLS  F      K     +       +          I+E   V 
Sbjct: 254 LGTKDEEARARESQKLLSYAFRYYRTHKLYESGVMLNTTKVWSGVQDQLKIGINESLSVT 313

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             + +       M   +         EK   L 
Sbjct: 314 IPRGQADKLQATMDVDR---VIKAPIEKGQELG 343


>gi|307823377|ref|ZP_07653606.1| Beta-lactamase [Methylobacter tundripaludum SV96]
 gi|307735362|gb|EFO06210.1| Beta-lactamase [Methylobacter tundripaludum SV96]
          Length = 389

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 165/343 (48%), Gaps = 13/343 (3%)

Query: 2   RQFLVIIAMAMLSNIFPF--------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +   V++  ++L                 A T     Y L++ +TG V+AEN  D    P
Sbjct: 5   KNLPVLLFFSLLIATTAANAEDAEITTPAAPTIAASGYILMNYDTGKVLAENNADVKLAP 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTK+M+ YVVF  +      L   +TIS+ A E P S    + G+ + +++ LK +I+
Sbjct: 65  ASLTKIMSVYVVFREISNGHLHLNDLVTISQKAWETPGSRMFIEVGNQVKVEDLLKGVII 124

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND +VA+AE +   E  F   MN  ++ LG+  +HF +++G+    HYTTARD+AIL
Sbjct: 125 QSGNDASVALAEHIAGDETTFADMMNQHAERLGMKNSHFQDSNGLPIDNHYTTARDLAIL 184

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +  +FP Y  +F  K          N N  +      DG+KTGFT A+G+ +VASA+
Sbjct: 185 SQALIKEFPDYYRWFSQKEFTFNNIVQHNRNQLLSRDETVDGIKTGFTDAAGYCLVASAL 244

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEV 289
           + D  LI+V++GA   N R   + +LL+ GF      K             ++ +  N  
Sbjct: 245 RNDMRLISVVMGASSPNARANENQNLLNYGFRFFEAHKLYQGKTSLAEARVWKGDTKNLQ 304

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             ++E++  T       + +     DK       ++ T L   
Sbjct: 305 LGLAEDLYATIPRGHYNDLKAVINIDK-KITAPVKEGTKLGTV 346


>gi|317401414|gb|EFV82047.1| penicillin-binding protein [Achromobacter xylosoxidans C54]
          Length = 356

 Score =  224 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 159/324 (49%), Gaps = 6/324 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A T     + ++D N+G  +A + PD    PASLTK+MTAYVVF+ L+EK+  L  
Sbjct: 2   SAVPAPTIAAKAWIVIDVNSGQTLAASNPDMKVEPASLTKIMTAYVVFNALEEKRLTLEQ 61

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A     S    +    +T+D   + +IV+S ND +VA+AE++  +E  F   M
Sbjct: 62  TVPVSEHAWRTGGSRMFIEPRKPVTVDELNQGMIVQSGNDASVALAEAVGGSEAAFATLM 121

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  THFMNA G+    H T+ RD+A LS  + TD PQ+ HY++ K       
Sbjct: 122 NQEAERLGMRNTHFMNATGLPDPQHMTSTRDLATLSAHLITDHPQFFHYYKQKSFTYNKI 181

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T ++G+ +V++A++GD+ ++ V++G     TR + S  
Sbjct: 182 TQPNRNRLLWADPSVDGMKTGHTDSAGYCLVSTAVRGDRRILVVVVGTDSEATRAEESLK 241

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNTQMKE 312
           LL+  F N    K  +        +       N+         +   + +  +     + 
Sbjct: 242 LLNWSFQNFDTVKLFDKSQPGIDARVWEGTAENVKLGPPNPVSIAVPRGKAGDLKPVAQR 301

Query: 313 AKDKESHFIDFEKITLLKNKITKK 336
                +     +++  L+  +  K
Sbjct: 302 TDPLIAPLTKSQQVGTLQFTLDGK 325


>gi|158320620|ref|YP_001513127.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus oremlandii
           OhILAs]
 gi|158140819|gb|ABW19131.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus oremlandii
           OhILAs]
          Length = 386

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 8/343 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M    +II++A+ + I    +           L+D NTG V+ E        PAS+TK+M
Sbjct: 8   MICLSLIISLALSTAIVNGDTAPFDINAKSAILIDANTGTVLYEKNIHEKLPPASVTKIM 67

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +V   +   K  L   +T+S+ AS+   +    + G   T++  +K + ++SAND +
Sbjct: 68  TMLLVMEAIDSNKITLNDKVTVSERASKMGGTQLYLEPGEVKTVEELMKGVAIRSANDAS 127

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SW 175
           +A+ E +  TE+ FVQ MN  +K LG++ T F+N +G+   GH TTA D+AI+       
Sbjct: 128 LALGEHIAGTEELFVQEMNRRAKELGMNNTTFVNTNGLPAEGHVTTAYDIAIMSRELLKH 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           +    +        + G     +   NTN  + ++ GA+G+KTG+T  +   + ASA +G
Sbjct: 188 KSIHKWLTTWMDTVVVGKRQSEQSLVNTNRLINSYQGANGIKTGYTTEALHCLSASATRG 247

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNI 292
             + I+VIL A     R   +A LL  GF N    + +     +      +    E+  +
Sbjct: 248 GTTFISVILAAPSSQVRFNEAAKLLDYGFANYNTVEVVKKDGFVGNISLNKGKKAEIELV 307

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +++      +        KE    E      +K   +   I K
Sbjct: 308 AKDNLNVLVKKGEEAKVHKEIVLPEFINAPIKKGDTVGEIIVK 350


>gi|311693499|gb|ADP96372.1| serine-type D-Ala-D-Ala carboxypeptidase [marine bacterium HP15]
          Length = 374

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 5/330 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L++       +    +          Y L+D  +G +I E        PASLTK+MTAY+
Sbjct: 2   LMLALTGKAMSQSVLIPSPPQIAGSSYVLMDPKSGRIIMEENSHERLPPASLTKMMTAYI 61

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           V   L E +  ++  + IS NA +   S +  ++G+ +++++ L+ +I++S ND +VA+A
Sbjct: 62  VERELDEGRIAMSDMVPISVNAWKTEGSRTFVREGTQVSVEDLLRGVIIQSGNDASVALA 121

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E  FV  MN  ++ LG+  T+F+NA G+    H++TA D+A+L+  I  D+P+ 
Sbjct: 122 EFVAGSEGAFVDIMNQQAQLLGMKDTNFVNATGLPSPEHFSTAYDLAMLARAIINDYPEN 181

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              +  K       + PN N  +      DG+KTG T  +G+ +VASA + D   IAV++
Sbjct: 182 YPLYAEKHFTYNNIRQPNRNSLLWRDDSVDGLKTGHTEEAGYCLVASAKRNDTRFIAVVM 241

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQ 300
           G      R +    +L+ GF      +      +      +          ++E+V  T 
Sbjct: 242 GTNSSEARAQEIQKMLNYGFRYYESERLFRSGQELIEARVWGGQADQLSVGMTEDVYVTI 301

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 + +     D        +    L 
Sbjct: 302 PRGSRNDLESTVDLDSV-IKAPIKVGDELG 330


>gi|319944900|ref|ZP_08019162.1| D-alanyl-D-alanine carboxypeptidase DacA [Lautropia mirabilis ATCC
           51599]
 gi|319741470|gb|EFV93895.1| D-alanyl-D-alanine carboxypeptidase DacA [Lautropia mirabilis ATCC
           51599]
          Length = 411

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 98/358 (27%), Positives = 167/358 (46%), Gaps = 24/358 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +RQ L  + +A    +   ++              + L D +T  V+    PD    PAS
Sbjct: 21  LRQRLSALMLATSLGLAAPVAMAQSLPPPDIGGRSWFLFDVSTNTVLYSQAPDERVEPAS 80

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTKLMTAYVVF  L++    + T   +S+ A +   S          T++  L  LI++S
Sbjct: 81  LTKLMTAYVVFEALRDGTLNMDTRPPVSQAAYKAIGSRMFVDPRKPATVEELLHGLIIQS 140

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND A+ +AE++  +E+ F Q MN  ++ +G+  +HF+NA G+    HY+TARDMA+L+ 
Sbjct: 141 GNDAAIILAEAVSGSEEAFAQQMNAEARRIGMKNSHFVNASGLPAPEHYSTARDMALLAT 200

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           RI  +FP Y   +  K     G + PN N  +      DGMKTG T A+G+ +VASA + 
Sbjct: 201 RIIKEFPDYYRMYSEKEYTFNGVRQPNRNRLLYIDPSVDGMKTGHTDAAGYCLVASAHRE 260

Query: 236 D------------QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII-----K 278
                        + +++V++GA    TR   S  LL+ GF N    +            
Sbjct: 261 QRNAADPNGSPFSRRILSVLMGATTDATRATESQKLLNYGFQNFEALQLYRKNQPVGQHP 320

Query: 279 DFYQQNLSNEVPNISEEVCT--TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             ++   +      +++V     + +I N   +++  +   +     ++I  L+ ++ 
Sbjct: 321 PVWKGQQATVAAGFADDVLITAPRSQIANIKGEIERTEPLVAPIHAGQRIGTLRIRLG 378


>gi|330505013|ref|YP_004381882.1| serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas mendocina
           NK-01]
 gi|328919299|gb|AEB60130.1| serine-type D-Ala-D-Ala carboxypeptidase [Pseudomonas mendocina
           NK-01]
          Length = 391

 Score =  223 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 10/340 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++A  +       +  A       Y L+D  +G+V+ EN  D    PASLTKLMTAY+
Sbjct: 14  LTLLAAPLAMANQQVVPAAPQLAAKSYVLMDAASGNVLVENNADQRLPPASLTKLMTAYI 73

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
               ++  K      +TIS++A          S       S  T+D+ L  +I++S ND 
Sbjct: 74  ATLEIRNGKIGEQDLVTISEHAWRTGGAASGGSTMFLPLNSQATVDDLLHGIIIQSGNDA 133

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++AIAE +  +E  F   MN T++ LG+  +HFMNA G+    HY++A DMAIL+  I  
Sbjct: 134 SIAIAEYIAGSEDAFADMMNATAERLGMKNSHFMNATGLPHPEHYSSAHDMAILARAIIN 193

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +  ++   +  K       K PN N  +      DG+KTG T  +G+ +VASA++    +
Sbjct: 194 EDAEHYAIYSQKEFLWNNIKQPNRNLLLWRDRTVDGLKTGHTSEAGYCLVASAVRDGARM 253

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           I  + G      R   +  LL+ GF     R       +      ++   +     ++E+
Sbjct: 254 ITSVFGTDSEQARAAETQKLLTYGFRFFESRTFYQKGTELAQATVWKGATNQVKAGLAED 313

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  T  +      Q     +        ++  ++     K
Sbjct: 314 LTMTMPKGQLEKLQASMTLN-PQLIAPIQQGDVIGKVEVK 352


>gi|291541617|emb|CBL14727.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus bromii L2-63]
          Length = 382

 Score =  223 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 169/349 (48%), Gaps = 13/349 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +R+  V I +  +  + PF+        A++   P   L++++TG V+ E  P      A
Sbjct: 2   LRKAFVSITLCAVFLLLPFVGLKVNALSADSISAPSAVLMESSTGKVLFEKNPHEQRPCA 61

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT  +VF  +   K  L   IT S++A+    S+   +KG TM+ D+ +K  +V 
Sbjct: 62  SVTKIMTLLLVFEAVDSGKLSLDDEITASEHAAGMGGSDIWLEKGETMSADDMIKATVVV 121

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND AVA+AE +   E  FV+ MN+ +K LG++ T F N +G+ + GH T+A D+A++S
Sbjct: 122 SANDAAVALAEHISGGEDAFVEKMNSRAKELGMNDTVFKNCNGLDEEGHITSAYDVALMS 181

Query: 175 WR-IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
               K +         +  L     +  NTN  + T+ G  G+KTG T  +G  + A+A 
Sbjct: 182 RELTKHEKIFDYTSIWLDNLRGGKTQIVNTNKLLKTYNGITGLKTGTTNDAGCCMSATAT 241

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVP 290
           +GD SLI+V+LG      R   +A+LL  GF N + ++                +++ V 
Sbjct: 242 RGDVSLISVVLGCKTGKERFADAAALLDYGFANVSVKELTLPEDMPKSIEVNGGMTDSVK 301

Query: 291 ---NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               +S ++   +       T++      ++      KI  L   +  K
Sbjct: 302 LECKVSSKIVVDKGSGAKITTEIDLPDKIDAPVEKNRKIGTLTYLVNSK 350


>gi|209964479|ref|YP_002297394.1| D-alanyl-D-alanine carboxypeptidase [Rhodospirillum centenum SW]
 gi|209957945|gb|ACI98581.1| D-alanyl-D-alanine carboxypeptidase [Rhodospirillum centenum SW]
          Length = 403

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 86/335 (25%), Positives = 156/335 (46%), Gaps = 5/335 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R+   I  + ++  I P  +           L+DT+TG V+ E   D     +S++K+MT
Sbjct: 29  RRLAAIAVLTLVGTILPAQAATIDTIAREAILIDTSTGTVLFEKNADERTPTSSMSKVMT 88

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+VF  ++  +  L   + +S+NA     S    + G+++ +++ ++ +I++S ND  +
Sbjct: 89  MYMVFDRIRSGRLSLDDTLPVSENAWRMQGSKMWVELGNSIRVEDLIRGVIIQSGNDACI 148

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +AE L  +E  F   M   +  +G++A++FMNA G     HY+TARD+A L+ R+  DF
Sbjct: 149 VLAEGLSGSEPAFAADMTRKAHEMGMTASNFMNASGWPDPDHYSTARDLATLAQRLIKDF 208

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P+++HY+  K     G K  N N  +   +G DG+KTG T ++G+ ++A+  +  + L+ 
Sbjct: 209 PEFLHYYSEKEFTYHGIKQGNRNPLLYRNMGVDGLKTGHTESAGYGLIATGERDGRRLVL 268

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVC 297
           V+ G  +   R   SA LL  G+   T                +          + +E+ 
Sbjct: 269 VVNGLPNMQARADESARLLEWGWREFTSVALFKAGEMIDTLPVWLGAAETVPAVLDQELK 328

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            T       N ++    D         K T +   
Sbjct: 329 ITLTRAQQRNLKVTLLSD-GPVAAPVPKGTRIGTL 362


>gi|30249456|ref|NP_841526.1| D-alanyl-D-alanine carboxypeptidase [Nitrosomonas europaea ATCC
           19718]
 gi|30138819|emb|CAD85396.1| D-alanyl-D-alanine carboxypeptidase 1 (S11) family [Nitrosomonas
           europaea ATCC 19718]
          Length = 385

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 90/342 (26%), Positives = 157/342 (45%), Gaps = 6/342 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+QF+  + +    +               + L+D ++   +A + P    +PASLTKLM
Sbjct: 13  MKQFIFSLFLLATISPAWSQQPELAVAAKSFILIDFHSSQTLASSNPHERLDPASLTKLM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYVVFS L++++  +   + +S  +     S    +    +T+D  +  +IV+S ND  
Sbjct: 73  TAYVVFSALQQERIKIDQVVPVSNRSWRMVGSRMFIEPNKQVTVDELIHGVIVQSGNDAC 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E  FV  MN  +K LG+  THF N+ G+    HY+TA D+A+L+  I  D
Sbjct: 133 VALAELIAGSEDLFVHMMNEEAKRLGMHNTHFTNSTGLTHSDHYSTAHDLALLAAAIIRD 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    + ++     G    N N  + T    DGMKTG+T A+G+ +V SA +  + LI
Sbjct: 193 FPERYPLYSLREYTYNGITQQNRNRLLWTDPNVDGMKTGWTEAAGYCLVTSAKRDQRRLI 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE------ 294
           +V++G    N R+  S  LL+ GF                  Q        +        
Sbjct: 253 SVVMGTASPNARSIESQRLLNYGFQFFDTAHPYKKDQPVANVQIWKGAQNKLKVGFDRDI 312

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                + ++     +M+  +   +      ++ ++K  +  +
Sbjct: 313 YFSLPKGKVEGLKARMEYRQPLIAPIDRGREVGMVKFILDGQ 354


>gi|311030730|ref|ZP_07708820.1| D-alanyl-D-alanine carboxypeptidase [Bacillus sp. m3-13]
          Length = 387

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 15/351 (4%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++F+  IIA+A   + F  +  AE              L++ +TG V+ E        P
Sbjct: 1   MKKFITAIIAIAFTFSAFSPVVGAEEKSVQLTENARSAILIERDTGQVLYEKNGHEKLPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MT  ++   + + +      I  S+ A+    S    + G  MT D  L+ + +
Sbjct: 61  ASMTKIMTMLLIMEAIDKGELTWDEKIRTSEYAASMGGSQIFLEPGEEMTTDEMLRGIAI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND +VA+AE +  +E  FV  MN  +K LGL  T F N  G+    HY+TA DMA++
Sbjct: 121 ASGNDASVAMAERIAGSEAAFVDRMNAKAKELGLENTLFQNPTGLPAKNHYSTANDMAVM 180

Query: 174 SWRIKTDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           +  +        +  Q     +    K     NTN  V  + G DG+KTGFT  + + + 
Sbjct: 181 AKELLKFEGITKYTGQYEDYLRQDSEKKFWLVNTNKLVRFYPGVDGVKTGFTQEAKYCLT 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNL 285
           A+A + +  +IAV+ GA     RN    ++L   F                  +  + + 
Sbjct: 241 ATAKKDNMRVIAVVFGAPTPKDRNAQITNMLDFAFSQYKTHPMYERNVAVGRVEISKGSQ 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  SE +    K+  N +   K     E+     +K   +   + KK
Sbjct: 301 KEVDAVTSEPISVLTKKGENTDDVEKIITVDENVKAPVKKGDKVGKIVLKK 351


>gi|9971925|gb|AAG10487.1|AF279106_49 predicted penicillin-binding protein 6 precursor [uncultured marine
           gamma proteobacterium EBAC31A08]
          Length = 385

 Score =  222 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 7/336 (2%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ L  +++ ++      F+  +    L  Y L++ NT  VIAE   D    PAS+TK+
Sbjct: 1   MKKLLFTLLSTSIFIQAQSFVPDSPELDLKSYILIEPNTNTVIAEFNSDLEIEPASMTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT+YVV   +      L   + IS+ A     S +  + G  +T+ + LK ++++S ND 
Sbjct: 61  MTSYVVADQIANGLISLDDEVLISEKAWRMQGSKTFIEAGKKVTVSDLLKGIMIQSGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VAIAE    TE+ FV  MN+ + +L ++ T F N+ G+    H+++A+D+A L+     
Sbjct: 121 SVAIAEYAGGTERGFVDLMNSYAASLEMNNTIFQNSTGLPDENHFSSAKDLANLTANYIN 180

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FP+    ++ K       K  N N  +     ADG+KTG T A+G+ +V SA +G   L
Sbjct: 181 KFPEEYALYKQKQFTFNNIKQLNRNKLLWRDDSADGVKTGHTEAAGYCLVGSAKRGGMRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY------IIKDFYQQNLSNEVPNIS 293
           I V+ G+   N R   S  LL  GF   T +K ++       I     Q+ +        
Sbjct: 241 ITVVAGSKSDNDRFLSSQRLLEYGFRFFTTQKMLSAEKEYQNITVWGGQEKILGVGVLED 300

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +   +    N  T  K   + ++  +  +K+  L
Sbjct: 301 ISITLPRTSFKNVETVYKVNNNIQAPIVVGQKVGTL 336


>gi|288942562|ref|YP_003444802.1| beta-lactamase [Allochromatium vinosum DSM 180]
 gi|288897934|gb|ADC63770.1| Beta-lactamase [Allochromatium vinosum DSM 180]
          Length = 380

 Score =  222 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 90/324 (27%), Positives = 146/324 (45%), Gaps = 3/324 (0%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                        +   Y L+D +TG  +AE   D    PASLTK+MTAY VF  L  ++
Sbjct: 22  VGAQTTTPAPPELEAKGYLLVDFHTGKTLAELNADERLEPASLTKIMTAYTVFRELASER 81

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             LT  + +S+ A     S    + G  ++L++ LK +I++S ND +VA+AE +    + 
Sbjct: 82  IKLTDQVLVSEKAWRTGGSKMFIEVGKHVSLEDLLKGMIIQSGNDASVALAEYVSGNVES 141

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG++ +HF N +G+     YTTARDMA ++  +  +FP+Y  ++  +  
Sbjct: 142 FANLMNAHAKRLGMTNSHFTNPNGLPDPELYTTARDMARVAVALIREFPEYYAWYSNQEF 201

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
              G    N N  +     ADG+KTG+T A+G+ +V SA + D  LI+V++G      R 
Sbjct: 202 TYNGITQANRNPLLKRDPTADGIKTGYTKAAGYCLVGSAKRDDMRLISVVMGTPSPRARA 261

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           + S +LL+ GF      K                  + +P   E           Y+   
Sbjct: 262 EASLALLNYGFRTYESHKLYPVGQPIENLRVWYGEQDTLPVGPERDVVATIPRGQYDKLS 321

Query: 311 KEAKDKESHFIDFEKITLLKNKIT 334
              +          +   L + + 
Sbjct: 322 ARIEKTSDMNAPIAQGDQLGDVVV 345


>gi|226942990|ref|YP_002798063.1| D-Alanyl-D-Alanine carboxypeptidase [Azotobacter vinelandii DJ]
 gi|226717917|gb|ACO77088.1| D-Alanyl-D-Alanine carboxypeptidase [Azotobacter vinelandii DJ]
          Length = 404

 Score =  222 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 5/318 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +          Y L+D  +G V+ E+  +    PASLTKLMTAY+    +K  +   + 
Sbjct: 46  AIPAPPQLASTAYLLMDAASGQVLIESNGEQRLPPASLTKLMTAYIATLEIKRGQIKESD 105

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T+S+ A     S    + G+ +++ + L  +I++S ND +VA+AE +  +E  F   M
Sbjct: 106 LVTVSERAWRTGGSRMFIQVGTQVSVSDLLHGIIIQSGNDSSVALAEHIAGSEDAFADMM 165

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N T++ LGLS THFMNA G+    HY++A DMA L+  I  D P +   +  K       
Sbjct: 166 NATAQRLGLSNTHFMNATGLPHAEHYSSAHDMARLARAIIYDDPAHYAIYAQKEFFWNNI 225

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           K PN N  +      DG+KTG T  +G+ +VASA++  Q LIAV+ G      R   +  
Sbjct: 226 KQPNRNLLLWRDKTVDGLKTGHTEEAGYCLVASAVRDGQRLIAVVFGTKSEQARAAETQK 285

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           LL+ GF     +      ++      ++   +     ++E++  T             + 
Sbjct: 286 LLTYGFRFFETQTFFQKNVELARSPVWKGASNEVRIGLAEDLTLTMPRG-QLKQLTTTSA 344

Query: 315 DKESHFIDFEKITLLKNK 332
            +       ++  ++   
Sbjct: 345 FEPQLIAPIQQGAVVGKV 362


>gi|160872568|ref|ZP_02062700.1| penicillin-binding protein 6 (D-alanyl-D-alaninecarboxypeptidase
           fraction C) (DD-peptidase) (DD-carboxypeptidase) (PBP-6)
           [Rickettsiella grylli]
 gi|159121367|gb|EDP46705.1| penicillin-binding protein 6 (D-alanyl-D-alaninecarboxypeptidase
           fraction C) (DD-peptidase) (DD-carboxypeptidase) (PBP-6)
           [Rickettsiella grylli]
          Length = 397

 Score =  221 bits (563), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 147/317 (46%), Gaps = 5/317 (1%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            F  IA       Y L+D  +G ++A    D    PASLTK+MT+YVV   L++ +  LT
Sbjct: 40  TFTPIAPNVNAKAYLLMDAYSGKILASKNIDEHLAPASLTKMMTSYVVSMALQQGRIHLT 99

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             + IS+ A +   S    K G  +++ + ++ +IV S ND  VA+AE +  +++ FV  
Sbjct: 100 DLVPISEAAWKTGGSKMFVKVGDKVSVQDLMQGMIVDSGNDACVAMAEYIAGSQESFVNL 159

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  LG+  THF++  G+    HYTTARDM+IL+  +  DFP+   ++  K     G
Sbjct: 160 MNQQAARLGMKNTHFVDVDGLPDPNHYTTARDMSILARALILDFPEDYKWYSQKWFSYNG 219

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            K PN N  +      DG+KTG T  +GF + AS  +    LI +++GA     R + S 
Sbjct: 220 IKQPNRNRLLWRNPDVDGIKTGHTNEAGFCLAASGQKNGLRLITIVMGAPSDEVRAQDSQ 279

Query: 258 SLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            LL+ GF     RK  N          +    S      + ++  T          M   
Sbjct: 280 KLLTYGFRFFESRKLYNAGENLATTKVWFGERSKIEAGFATDLYVTLPLGFT-KKPMMTM 338

Query: 314 KDKESHFIDFEKITLLK 330
             +       +K  ++ 
Sbjct: 339 VFRPHLKAPLKKGEIIG 355


>gi|149181665|ref|ZP_01860158.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus sp. SG-1]
 gi|148850643|gb|EDL64800.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus sp. SG-1]
          Length = 387

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/351 (23%), Positives = 151/351 (43%), Gaps = 16/351 (4%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIAETNK------LPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR+ +  I+ + ++++ F   + AE  K           L++ +TG V+ +        P
Sbjct: 1   MRRIISAILMLVLITSAFAPFASAEEKKTELAAGAKSAILIERDTGTVLYDKNSHEKLPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MT  ++   L + +      +  S+ A+    S    + G  MT+   L  + +
Sbjct: 61  ASMTKIMTMILIMEALDKGQIKWEDEVRTSEYAASMGGSQIFLEPGEVMTVKEMLLGISI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND +VA+AE +  +E+ FV+ MNN  K+LGL  T+F N  G+    HY++A DMA++
Sbjct: 121 GSANDASVAMAEHIAGSEEGFVEKMNNKVKDLGLKDTNFKNPTGLPASEHYSSAHDMAMM 180

Query: 174 SWRIKTDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           +  +        +        +    K     NTN  V  + G DG+KTGFT  + + + 
Sbjct: 181 AKELLKYQEITKYTGTYESYLREDTDKKFWLVNTNKLVRFYPGVDGLKTGFTNEAKYCLT 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNL 285
           A+A + +  +IAV+ G      RN   + +    F     +            +  +   
Sbjct: 241 ATAKKDNMRVIAVVFGEPTPKDRNAEISKMFDYAFSQYQTQPLFEKGASVGKAEISKGKA 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +E +    K+    +   K+ K +       +K   +   + +K
Sbjct: 301 KEVEAMTNEPISLLAKKGEKLDGIEKKVKLQ-KLKAPVKKGDTIGKLVVEK 350


>gi|256004001|ref|ZP_05428987.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 2360]
 gi|255992129|gb|EEU02225.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 2360]
 gi|316940572|gb|ADU74606.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 1313]
          Length = 404

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 5/317 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +   Y L+D  TG ++ EN        AS+TK+M+  +V   +   K  +   +T S
Sbjct: 49  FELQAKSYVLMDAETGQILLENRSHERLPIASITKIMSMLLVMEAIDSGKINMDDIVTAS 108

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A+    S +  + G   T+ +ALK +   S+ND+ V++AE +  +E+ FV  MN  +K
Sbjct: 109 EYAASMGGSQAYIEPGEQYTVRDALKAVATHSSNDVTVSLAELVAGSEQVFVVLMNEKAK 168

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKKYP 201
            LG++ T+F++  G+   GHY+TA D+A++S  +    P+ + +  I          +  
Sbjct: 169 ELGMNNTNFLDCTGLTDEGHYSTAYDVALMSRELIVKHPKILEFTSIWMDTFRNGEFQLV 228

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           NTN  V  + G DG+KTGFT A+G  + A+A + D  LI+V+LG  D NTR   +  LL 
Sbjct: 229 NTNKLVHFYEGCDGLKTGFTRAAGHCLSATAKRNDMRLISVVLGEPDSNTRFAETRKLLD 288

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE---EVCTTQKEIINYNTQMKEAKDKES 318
            GF N   ++           +     +P I     +         +    ++E + K S
Sbjct: 289 YGFANYESKQVNKKGEVVNEIEVKRALIPKIKALYGDDVKLLFARSDKGKVVREVRLKSS 348

Query: 319 HFIDFEKITLLKNKITK 335
                 K   +   + K
Sbjct: 349 LTAPVAKGEKVGEVVYK 365


>gi|317128503|ref|YP_004094785.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cellulosilyticus
           DSM 2522]
 gi|315473451|gb|ADU30054.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cellulosilyticus
           DSM 2522]
          Length = 387

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 17/351 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK------LPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++  +++ + +        ++AE +            L++ +TG V+ E        PA
Sbjct: 1   MKKSFIVLLLGLYMFSSAGSALAEESTVDLADDATSAILIERDTGQVLYEKNSGEKLPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT  ++   +   K      +  S+ A+    S    + G  MT++  +K + + 
Sbjct: 61  SMTKVMTMLLIMEAIDSGKITWDEKVRTSERAASMGGSQIFLEPGEEMTVEEMMKGIAIA 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL- 173
           S ND +VA+AE L  +E++FVQ MN+ +K LGL  THF+N++G+    HY++A D+A++ 
Sbjct: 121 SGNDASVAMAEHLAGSEEQFVQMMNDKAKKLGLKNTHFVNSNGLPAENHYSSAEDLALMA 180

Query: 174 ----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +   T +      + ++          NTN  V  + G DG+KTGFT  + + + 
Sbjct: 181 KALLKYEEITKYTSLYEDY-LRQDTDDEFWLVNTNKLVKFYPGVDGLKTGFTNEAKYCLT 239

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNL 285
           ASA +    +IAV++GA     RN+    +L   +     +++ +        +  + + 
Sbjct: 240 ASANKNGMRIIAVVMGAPTPKDRNRQVTEMLDYAYSQYELQRRYDRGQVLGEAEVSKGST 299

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   E V    K+  N     +  +  E      +K   +     +K
Sbjct: 300 KTVPALAKENVSLLMKKGENVEGITERLEINE-IPAPVKKGDTIGTLYVEK 349


>gi|329893664|ref|ZP_08269798.1| D-alanyl-D-alanine carboxypeptidase [gamma proteobacterium
           IMCC3088]
 gi|328923591|gb|EGG30903.1| D-alanyl-D-alanine carboxypeptidase [gamma proteobacterium
           IMCC3088]
          Length = 389

 Score =  221 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 152/341 (44%), Gaps = 12/341 (3%)

Query: 1   MRQFLVIIAM--AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L   A     +S     +          + L+D  TG+VIAE+  +    PASLTK
Sbjct: 1   MQKLLATAAALGFSVSVSAAIIPAPPEVAARAHYLIDATTGYVIAESNANEQLPPASLTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIV 113
           LMT+YV+   ++  +      + IS+NA    P          + G  +++ +  K +++
Sbjct: 61  LMTSYVLSYEIERGRVAFDDKVLISENAWAQNPIFKGSSLMWLEPGMEVSISDLEKGIVI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND  VAIAE L   E  F   MN  ++ LG++ ++F N+HG+    H TTA D+A+L
Sbjct: 121 SSGNDATVAIAEHLAGNETAFADMMNTHAQRLGMNDSYFENSHGLPSPNHLTTAHDLALL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I  DFP +   +  +       K  N N  +G     DG+KTG+T  +G+ +V+SA 
Sbjct: 181 AKAIIQDFPTHYQIYAERDYTFNNIKQYNRNTLLGEDPSVDGLKTGYTSEAGYGLVSSAK 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEV 289
           +GD  LI+V+LG     TR   + SLL+ GF      + +         + +        
Sbjct: 241 RGDMRLISVVLGTSSAKTRASETRSLLNYGFRYFETAELLPAEREMEKPEVWMGLADYLS 300

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             + + +  T       N       + E      ++   + 
Sbjct: 301 VGVVDAITLTLPRGERRNVAQVVTLN-EPLSAPIKRGDEVG 340


>gi|152976485|ref|YP_001376002.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152025237|gb|ABS23007.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 392

 Score =  221 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 92/356 (25%), Positives = 152/356 (42%), Gaps = 20/356 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKL------------PYYTLLDTNTGHVIAENYPD 48
           M++   I+   ML      +S A++ K                 +++ +TG V+ E  P+
Sbjct: 1   MKRVFGILVCCMLLLSHTSVSFAKSEKAIEETKPKLAEQASSAIVIEQDTGKVLFEKNPN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
               PAS+TK+MT  ++   +++ K  L   +  S++A+    S    + G  MT++  L
Sbjct: 61  EKLPPASMTKIMTMLLIMEQVEKGKLKLEDKVRTSEHAASMGGSQIFLEPGEEMTVNEML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K + + S ND +VA+AE +  +E+ FV  MN  +K LGL  THF N  G+    HY+TA 
Sbjct: 121 KGIAIASGNDASVAVAEHIAGSEEGFVNMMNKRAKELGLKNTHFQNPTGLPAKNHYSTAI 180

Query: 169 DM----AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           DM      L            +   ++    K     NTN  V  + G DG+KTGFT  +
Sbjct: 181 DMAIIAKELMKYPLIRKYTGKYEDYLRENTDKKFWLVNTNKLVRFYPGVDGVKTGFTTEA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DF 280
            + + ASA +    +I+V++GA     RN     LL   F   T +K      K      
Sbjct: 241 KYCLTASAEKNGMRVISVVMGAPTSKERNSQVTKLLDYAFGQYTTKKLYKRGEKIQTVQV 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +          ++ V    K+  + +   KE   ++      +K   L   +  K
Sbjct: 301 GKGKKEKVDLVAADNVSLLMKKGEDMDKIKKEIIAEKKVKAPIKKGDALGTLVITK 356


>gi|125973197|ref|YP_001037107.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|281417396|ref|ZP_06248416.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           JW20]
 gi|125713422|gb|ABN51914.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|281408798|gb|EFB39056.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           JW20]
          Length = 404

 Score =  221 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 5/317 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +   Y L+D  TG ++ EN        AS+TK+M+  +V   +   K  +   +T S
Sbjct: 49  FELQAKSYVLMDAETGQILLENRSHERLPIASITKIMSMLLVMEAIDSGKINMDDIVTAS 108

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A+    S +  + G   T+ +ALK +   S+ND+ V++AE +  +E+ FV  MN  +K
Sbjct: 109 EYAASMGGSQAYIEPGEQYTVRDALKAVATHSSNDVTVSLAELVAGSEQVFVVLMNEKAK 168

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKKYP 201
            LG++ T+F++  G+   GHY+TA D+A++S  +    P+ + +  I          +  
Sbjct: 169 ELGMNNTNFLDCTGLTDEGHYSTAYDVALMSRELIVKHPKILEFTSIWMDTFRNGEFQLV 228

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           NTN  V  + G DG+KTGFT A+G  + A+A + D  LI+V+LG  D NTR   +  LL 
Sbjct: 229 NTNKLVHFYEGCDGLKTGFTRAAGHCLSATAKRNDMRLISVVLGEPDSNTRFAETRKLLD 288

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE---EVCTTQKEIINYNTQMKEAKDKES 318
            GF N   ++           +     +P I     +         +    ++E + K  
Sbjct: 289 YGFANYESKQVNKKGEVVNEIEVKRALIPKIKALYGDDVKLLFARSDKGKVVREVRLKSF 348

Query: 319 HFIDFEKITLLKNKITK 335
                 K   +   + K
Sbjct: 349 LTAPVAKGEKVGEVVYK 365


>gi|226939903|ref|YP_002794976.1| DacC [Laribacter hongkongensis HLHK9]
 gi|226714829|gb|ACO73967.1| DacC [Laribacter hongkongensis HLHK9]
          Length = 382

 Score =  221 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 158/347 (45%), Gaps = 14/347 (4%)

Query: 1   MRQFLVI-IAMAMLSNI--------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +   ++ A+L             F+  A       Y + D  +G  +A   P+   
Sbjct: 1   MKKLIAASLSTALLFTSSWALAEGTAGFVPPAPDIAGKAYIVNDFYSGQTLASRDPNTRI 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PASLTKLMTAY+ F  +KE +      +  S+ A     S       + +++++ ++ +
Sbjct: 61  EPASLTKLMTAYLTFKAIKEGRLKGEQMLQPSEKAWRTEGSRMFLDLRTPVSVNDLMRGM 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV+S ND  V +AE++  +E+ F Q MN  +K LG++ ++F N+ G+     Y T RD+ 
Sbjct: 121 IVQSGNDACVTLAEAIGGSEEVFAQMMNREAKRLGMTGSNFTNSTGLPDPNLYMTVRDLG 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
           ILS  +  D+P++   + +K       K PN N  +      DG+KTG T ++GFN+V+S
Sbjct: 181 ILSGALIHDYPEFYPIYSMKEFTYNKIKQPNRNLLLYRDPSVDGLKTGHTASAGFNLVSS 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSN 287
           A + D+ +I+V++G      R   S+ LL+ G       +             Y+ + ++
Sbjct: 241 AKRDDRRVISVVVGTTSPEARAVESSKLLNYGLQFFDTPRLYQANQSVSTLRVYKGDAND 300

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                +++V  T  +      ++     +       ++   +     
Sbjct: 301 VNVGFADDVYVTVPKGAASRIKVSMTSTQP-LIAPVKQGQAVGKLTL 346


>gi|239827603|ref|YP_002950227.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. WCH70]
 gi|239807896|gb|ACS24961.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. WCH70]
          Length = 393

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 85/357 (23%), Positives = 148/357 (41%), Gaps = 21/357 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-------------AETNKLPYYTLLDTNTGHVIAENYP 47
           M++  + + +     I P  +                 N      L++ +TG V+ E   
Sbjct: 1   MKKLFIRLFLFASIFILPISANIHAEENKTNTRGIQLANDAKSAILIERDTGTVLYEKNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                PAS+TK+MT  ++   + + +      +  S+ A+    S    + G  MT+D  
Sbjct: 61  HKKLPPASMTKIMTMLLIMEAIDKGELSYKEKVRASEYAASMGGSQIFLEPGEEMTVDEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L+ + + S ND +VA+AE +  +E+ FV+ MN  +K LGL  T F N+ G+   GHY++A
Sbjct: 121 LRGIAIGSGNDASVAMAERIAGSEEAFVEMMNKKAKELGLKNTSFQNSTGLPAEGHYSSA 180

Query: 168 RDMAILSWRIKTDFPQYMHY----FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            DMA+++  +        +       ++    K     NTN  V  + G DG+KTGFT  
Sbjct: 181 YDMAMMARELLKYEDITKYTGIYEDYLRENTDKKFWLVNTNRLVKFYPGVDGLKTGFTNE 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           + + + A+A +    +IAV+ GA     RN     +L   F                  +
Sbjct: 241 AKYCLTATAKKNGMRVIAVVFGASTPKDRNAQITKMLDYAFSQYKTHPVYKRNEIIAHVN 300

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +          SE +    K+  + +   K  + KE+     +K   L   I K+
Sbjct: 301 VSKGKKKAIALVTSEPISVLTKKGQSIDQIEKVIQTKENVKAPIKKGDELGVLILKQ 357


>gi|163859128|ref|YP_001633426.1| secreted serine-type D-Ala-D-Ala carboxypeptidase [Bordetella
           petrii DSM 12804]
 gi|163262856|emb|CAP45159.1| secreted serine-type D-Ala-D-Ala carboxypeptidase [Bordetella
           petrii]
          Length = 414

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 3/317 (0%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A T     +  +D ++G V+A   PD    PASLTK+MTAYVVF+ LKEK+  L  
Sbjct: 60  SSVPAPTIAARAWITIDASSGQVLAAANPDMQIEPASLTKIMTAYVVFNALKEKRITLEQ 119

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S++A     S    +    +T+D  ++ +IV+S ND +VA+AE++  +E  F   M
Sbjct: 120 QVPVSEHAWRTGGSRMFIEPRKPVTVDELIQGMIVQSGNDASVALAEAVGGSESAFAALM 179

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LGL  THFMNA G+    H TT  D+A+LS  +  D P Y HY++ K       
Sbjct: 180 NQEAERLGLKRTHFMNATGLPDPQHVTTVADLAVLSAALINDHPDYYHYYKQKEFTYNKI 239

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +      DGMKTG T A+G+ +V++A++GD+ ++ V+ GA    TR + S  
Sbjct: 240 TQPNRNRLLWADPSVDGMKTGHTDAAGYCLVSTALRGDRRVLTVLAGADSEATRAEESLK 299

Query: 259 LLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           LL+  F N    +        +     +     V        +              A+ 
Sbjct: 300 LLNWSFQNFDTVQLYGKSQPGLDVRVWEGTVETVKLGPPHPVSLTVPRGKAGDIKPVAQH 359

Query: 316 KESHFIDFEKITLLKNK 332
            +       K   +   
Sbjct: 360 TDPLVAPLSKGQQVGTL 376


>gi|53802656|ref|YP_112644.1| D-alanyl-D-alanine carboxypeptidase [Methylococcus capsulatus str.
           Bath]
 gi|53756417|gb|AAU90708.1| D-alanyl-D-alanine carboxypeptidase [Methylococcus capsulatus str.
           Bath]
          Length = 392

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 147/318 (46%), Gaps = 3/318 (0%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P +          Y L D  +G V+AE   D    PASLTK+MTAY++F  L +    L 
Sbjct: 33  PLIPAPPELPAKAYLLQDFYSGRVLAERNADERLEPASLTKVMTAYILFRELAQGHVKLE 92

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +T+S+ A     S    + G+ ++++N LK +IV+S ND +VA+AE +   E  F Q 
Sbjct: 93  DMVTVSEKAWRTEGSRMFAQVGAQISVENLLKGMIVQSGNDASVALAEHVAGDEAVFAQL 152

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  ++ LG++ THF N+ G+    HYTTARD+A L+  +  +FPQY  +  IK      
Sbjct: 153 MNQNAERLGMTNTHFKNSMGLPDPDHYTTARDLATLTRAMIKEFPQYYPWHAIKEFVFND 212

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            K  N N  +      DG+KTG T  +G+ ++ SA++    +++V+LG      R   + 
Sbjct: 213 IKQVNRNRLLWRDPSVDGVKTGHTEGAGYCLITSAVRDGDRMVSVVLGTKSDTDRANANQ 272

Query: 258 SLLSMGFYNKTDRKKIN---YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           +LL+ GF     +        + K    +    EVP   +E          +       +
Sbjct: 273 ALLNYGFRFFETKPVHKGGEELAKARIWKGEQTEVPVGVDEDLYATFPRGQFQNLKTAME 332

Query: 315 DKESHFIDFEKITLLKNK 332
                     K   L + 
Sbjct: 333 VDADAMAPVRKGDRLGSI 350


>gi|88800720|ref|ZP_01116279.1| D-alanyl-D-alanine carboxypeptidase [Reinekea sp. MED297]
 gi|88776584|gb|EAR07800.1| D-alanyl-D-alanine carboxypeptidase [Reinekea sp. MED297]
          Length = 394

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 7/337 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            +I   A  +   P +  A       Y L+D  TG V+  +       PASLTKLMT+Y+
Sbjct: 17  FLIGITATCALAEPIIPAAPQLAATSYILMDAETGQVLVAHNEHEQMPPASLTKLMTSYI 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
               + E +  LT    +SK A + P S    + G  +T+++ L+ +I+ S ND +VA+A
Sbjct: 77  AEREILEGRLELTDETLVSKKAWQMPGSRMFIEVGDLVTIEDLLRGVIIVSGNDASVALA 136

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---QHGHYTTARDMAILSWRIKTDF 181
           E +  TE  F Q MN  ++NLG+  THF NA G+       HY++A D+A+LS  +  D 
Sbjct: 137 EHIAGTEDLFAQLMNKYAENLGMINTHFSNASGLPPENGQEHYSSAYDLALLSQALIYDN 196

Query: 182 PQYMHYFQIKGLEIKGKK-YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            ++   +  +  +       PN N  +GT    DG+KTG T  +G+ + ASA +    LI
Sbjct: 197 AEFYPLYAERSFKYGPVSAQPNRNRLLGTNPDVDGLKTGHTEEAGYCLAASAERDGMRLI 256

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVC 297
           +V++G    + R + +  LL+ GF      +                 + E+     +  
Sbjct: 257 SVVMGTRSEDARAQETQKLLTYGFRFFRTAEVHQGGESLHTMRIWGGATKELSLGLTDDL 316

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                    +    E                L   I 
Sbjct: 317 KLTIARGAEDMIRTELSIDSVIKAPVAAGDALGELIV 353


>gi|119896472|ref|YP_931685.1| D-alanyl-D-alanine carboxypeptidase [Azoarcus sp. BH72]
 gi|119668885|emb|CAL92798.1| probable D-alanyl-D-alanine carboxypeptidase [Azoarcus sp. BH72]
          Length = 376

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 96/337 (28%), Positives = 155/337 (45%), Gaps = 6/337 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR    ++              A       + L+D NTG V+A N PD    PASLTKLM
Sbjct: 1   MRFVFALLLSLFSLLAAAQSIPAPALAAKAWVLVDHNTGQVLAANDPDARIEPASLTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+ FS LK     L  P+ +S+ A     S    +    +T+   ++ +IV+S ND  
Sbjct: 61  TAYLTFSALKAGTIALDQPVPVSERAWRQEGSRMFIEPQKPVTVQELIRGVIVQSGNDAC 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  TE+ F   MN  ++ LG+S THF N+ G+     YTTA+D+A+L+  I  D
Sbjct: 121 VALAELIAGTEEAFAAMMNREAQRLGMSNTHFTNSTGLPDPQLYTTAKDLALLASAIIRD 180

Query: 181 FPQYM-HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           FP Y    + +K         PN N  +      DGMKTG T ++G+ +++SA++G + L
Sbjct: 181 FPDYYASLYSLKEYRYNNITQPNRNRLLWMDSTVDGMKTGHTSSAGYCLISSALRGPRRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           ++V+LGA     R + S  LL+ GF      K  +          ++   +      + +
Sbjct: 241 VSVVLGAESDTVRAQESLKLLNFGFQFFDTVKLYSADQALSQFRVWKGQANEVAAGFTSD 300

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              +  +    +      + ++      +K   +   
Sbjct: 301 FVISLPKG-QADKITATLESRQPVLAPLQKGQEIGTL 336


>gi|229543944|ref|ZP_04433003.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus coagulans 36D1]
 gi|229325083|gb|EEN90759.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus coagulans 36D1]
          Length = 387

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 88/351 (25%), Positives = 149/351 (42%), Gaps = 15/351 (4%)

Query: 1   MRQFLVIIAMAMLSN-------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++ + ++   ML+                   +     L++  TG V+          P
Sbjct: 1   MKKIIGLVTCFMLAAGVLVPEAFAAEKKNELAPEAKSAILIEQATGEVLYSKNSHEELPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MT  ++   L + +  +   +  S+ A+    S    + G  MT++  LK + +
Sbjct: 61  ASMTKIMTMLLIMEALDKGEIKMDEKVRTSEYAASMGGSQIFLEPGEEMTVEQMLKGIAI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AVA+AE +  +E+ FV  MN  +K LGL  THF N  G+   GHY++A DMAI+
Sbjct: 121 GSANDAAVAMAERIGGSEEAFVDKMNERAKALGLKNTHFENVTGLPVKGHYSSAYDMAIM 180

Query: 174 SWRIKTDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           + ++           +     +    K     NTN  V  + G DG+KTGFT  + F + 
Sbjct: 181 AKQLLKHHGITHFTGKYEDYLREGSDKKFWLVNTNKLVRHYPGVDGLKTGFTNEAKFCLT 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
           A+A +    +IAV+ GA     RN   + +L   F   T                 + ++
Sbjct: 241 ATAKKNGMRVIAVVFGAPSTKVRNAQVSKMLDYAFSQYTSHPLYKKGAALDQVKVSKGSM 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +     SE V    K+ +  +   K  K K++     +K   +      +
Sbjct: 301 RHVRAVTSEPVSVLTKKGVKLSNLKKTVKLKKNVQAPVQKGDEIGTLTISQ 351


>gi|126665209|ref|ZP_01736192.1| D-alanyl-D-alanine carboxypeptidase [Marinobacter sp. ELB17]
 gi|126630579|gb|EBA01194.1| D-alanyl-D-alanine carboxypeptidase [Marinobacter sp. ELB17]
          Length = 392

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 89/333 (26%), Positives = 152/333 (45%), Gaps = 6/333 (1%)

Query: 4   FLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           F+  + + +  N       +          Y L++  +G VI EN       PASLTK+M
Sbjct: 16  FVYTLLLVVAGNALAQTVLIPAPPQIAGSSYVLMEPKSGQVIMENNSSERLPPASLTKMM 75

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+V   L E +  +   + IS  A +   S +  ++G+++T+++ L+ ++++S ND +
Sbjct: 76  TAYIVERELDEGRIAMGDMVPISVTAWQTGGSRTFVREGTSVTVEDLLRGVVIQSGNDAS 135

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E  FV  MN  +  LG++ T+F NA G+    HY+TA+D+A+L+     D
Sbjct: 136 VALAEFVAGSEGAFVDIMNQQADLLGMTNTNFENATGLPSPNHYSTAQDLALLAQATIND 195

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P+    +  K       + PN N  +      DG+KTG T  +G+ +VASA + D   I
Sbjct: 196 YPETYPIYAEKHFTFNNIRQPNRNSLLWRDNSVDGLKTGHTEEAGYCLVASAKRDDTRFI 255

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVC 297
           AV++GA    +R++    +L+ GF      +  +     IK       +N +P    E  
Sbjct: 256 AVVMGARSAESRSQEVQKMLNYGFRYYQSERLFSAGQELIKSPVWGGAANTLPVGVFEDV 315

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    N                     L 
Sbjct: 316 YVTISRGARNQLESVIDLDSVVKAPVSAGDELG 348


>gi|260597233|ref|YP_003209804.1| D-alanyl-D-alanine carboxypeptidase fraction C [Cronobacter
           turicensis z3032]
 gi|260216410|emb|CBA29490.1| D-alanyl-D-alanine carboxypeptidase dacC [Cronobacter turicensis
           z3032]
          Length = 403

 Score =  219 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 97/339 (28%), Positives = 155/339 (45%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            ++++++      P   +A       + L+D ++G V+AE   D   +PASLTKLMT+YV
Sbjct: 19  FLLMSLSTAHAADPIAPVAPDVDARAWILMDYHSGKVLAEGNADEKLDPASLTKLMTSYV 78

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  L   +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 79  VGQALKAGKIHLDDKVTVGKDAWATGNPALRGSSLMFLKPGDQVSVADLNKGVIIQSGND 138

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++AIA+ +  ++  FV  MN  +K LGL++T F   HG+   G ++TARDMA+L   + 
Sbjct: 139 ASIAIADYVAGSQDAFVGLMNGYAKRLGLTSTTFKTVHGLDAPGQFSTARDMALLGKALI 198

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     + +  DGMKTG T  +G+N+VASA QGD 
Sbjct: 199 HDVPDEYAIHKEKEFTFNKIRQPNRNRLLWSSSMNVDGMKTGTTAGAGYNLVASATQGDM 258

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNIS 293
            LI+V+LGA     R + S  LL+ GF        I        +  +  + S       
Sbjct: 259 RLISVVLGAKTDGIRFRESEKLLTWGFRFFETVTPIKPDAAFVNQRVWFGDSSEVKLGAG 318

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E    T  +    N +              ++  ++   
Sbjct: 319 EAGSVTIPKGQLKNLKATYTLTSPQLTAPLKQGQVVGTI 357


>gi|213648937|ref|ZP_03378990.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 387

 Score =  219 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|228909907|ref|ZP_04073728.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis IBL 200]
 gi|228849742|gb|EEM94575.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis IBL 200]
          Length = 396

 Score =  219 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAQKNGMRVISVVMGAPTSKERNNEVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|15614098|ref|NP_242401.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus halodurans C-125]
 gi|10174152|dbj|BAB05254.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus halodurans C-125]
          Length = 387

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 85/351 (24%), Positives = 158/351 (45%), Gaps = 15/351 (4%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNK------LPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR  L  I+++ ++  +   + +A   +           +++ +TG V+ E   D    P
Sbjct: 1   MRVILSSIVSVCLVVGMIAPVGLAAEKQPNLAKEASSAIVIERDTGQVLFEKNSDEKLPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MT  ++   +   K      +  S+NA+    S    + G  M++ + +K + +
Sbjct: 61  ASMTKIMTLLLIMEAIDSGKITYDDMVRTSENAASMGGSQVFLEPGEEMSVRDMIKAIAI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND +VA+AE L  TE++FV  MN  ++ LGL  T+F+N +G+ +  HYT+A D+A++
Sbjct: 121 ASGNDASVAMAEHLAGTEEEFVGMMNEKARQLGLKNTNFVNTNGLPEKDHYTSAYDLAMI 180

Query: 174 SWRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           S  +            +   ++    K     NTN  V  + G DG+KTGFT  + + + 
Sbjct: 181 SKELLKYEDITEFTSVYEDYLRKGTDKEFWLVNTNRLVKFYPGVDGLKTGFTKEAKYCLT 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
           A+A++    +I V++GA     RN     +L   F      +           +  + N 
Sbjct: 241 ATAVKNGMRVITVVMGAPTPKERNSQITEMLDFAFSQYQTHQVYERDTYMMDLNVRKGNK 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +     SE V    K+  + +   +  + KES      K  ++     ++
Sbjct: 301 KSVPIFTSESVSLVTKKGESIDNVTERVEWKESLLAPVHKGDVVGTLYLER 351


>gi|213428063|ref|ZP_03360813.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
          Length = 402

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|323493053|ref|ZP_08098187.1| D-alanyl-D-alanine carboxypeptidase [Vibrio brasiliensis LMG 20546]
 gi|323312701|gb|EGA65831.1| D-alanyl-D-alanine carboxypeptidase [Vibrio brasiliensis LMG 20546]
          Length = 398

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 100/340 (29%), Positives = 145/340 (42%), Gaps = 10/340 (2%)

Query: 4   FLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            L  ++++  +   P +           Y LLD +TG V+ E   D   NPASLTKLMTA
Sbjct: 21  LLSTLSLSFGAFAAPTIIPDPPALGAKGYILLDYHTGTVLVEKNADKKLNPASLTKLMTA 80

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV    +K     L   + IS+NA        S    + G+ + L +  + LIV+S ND 
Sbjct: 81  YVAGQEVKSGNISLDDQVRISRNAWAKNFPDSSKMFIEVGTDVELMDLYRGLIVQSGNDA 140

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VAIAE +  +E  FV  MN+ S+ LGL  T + N HG+   G Y+T  D+A LS  I  
Sbjct: 141 SVAIAEHVAGSEDAFVSLMNSWSQKLGLENTAYTNPHGLDSQGLYSTPHDIARLSQAIIR 200

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +        G    N N       L  DGMKTG+T  +G+++  SA  GD  
Sbjct: 201 DLPDIYPLYSETAFTYNGITQYNRNGLLRDRSLNVDGMKTGYTSGAGYSLATSATNGDMR 260

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           L++V++G+    +R   S  LLS GF                    +   +      I E
Sbjct: 261 LVSVVMGSSSTKSRESESKQLLSYGFRFFDTVSPTKVTDTLAEAKVWMGTVDAVPVGIEE 320

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            V  T  +      + +  +         EK   +   I 
Sbjct: 321 PVLITLPKGDAKKLKAEI-EYAGELEAPIEKGQPVGQVIY 359


>gi|224825266|ref|ZP_03698371.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lutiella nitroferrum
           2002]
 gi|224602187|gb|EEG08365.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lutiella nitroferrum
           2002]
          Length = 380

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 89/344 (25%), Positives = 155/344 (45%), Gaps = 11/344 (3%)

Query: 1   MRQFLVIIAMA------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   ++  A      +     PF+          Y L+D  +G V+A + PD    PA
Sbjct: 1   MKKLTSLLVAAAVALPSVSFANAPFVPPVPEIAGKAYYLVDFYSGQVVASSDPDKRIAPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMT Y+ +  +KEK+  L   +T+S        S         +++D+ +K + V+
Sbjct: 61  SLTKLMTGYLTYKAIKEKRLTLDQKLTVSHKGWTTGGSRMFLDPKIPVSVDDLIKGMDVQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  V +AE++  +E+ F Q M   ++ LG++ T F NA G+    HYTT  D+ IL+
Sbjct: 121 SGNDACVTLAEAIAGSEEAFGQMMTAEARRLGMNNTQFRNATGLPNPEHYTTVHDLGILA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I  ++P++   + +K     G   PN N  +      DGMKTGFT  +G+N+VAS+ +
Sbjct: 181 SAIIREYPEFYKTYSLKSFTYNGISQPNRNLLLYRDPNVDGMKTGFTDDAGYNMVASSRR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVP 290
             + +I+V++G      R   S+ LL+ G       K             Y+ +      
Sbjct: 241 DGRRVISVVVGTASPEARAVESSKLLNYGLQFFDTPKLYAASKPVSEIPVYKGDAKKLPI 300

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             + +V TT  +  +   +      +       +   ++   + 
Sbjct: 301 GFASDVYTTVLKGQSAQLKADLTTSQPVI-APIKAGQVVGKLVV 343


>gi|281416991|ref|ZP_06248011.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           JW20]
 gi|281408393|gb|EFB38651.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           JW20]
          Length = 384

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 91/342 (26%), Positives = 146/342 (42%), Gaps = 14/342 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             VI    M+  +  F      +      L++ +TG V+ E   D P  PAS+TK+MT  
Sbjct: 13  LAVITFFVMMFQVTAF--AQFESSAQSAILIEASTGQVLYEKNADVPMPPASITKIMTLL 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  L++        + IS+ A     S      G        +  + V SAND  VA+
Sbjct: 71  LGFEALEKGLVKWDDEVIISEKAWRMEGSKMFLLVGDKAKFGEIMTGISVVSANDGCVAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE L  +E+ FVQ MN  +K LGL+ T+F N++G+   GH  +ARD++ L+  +  ++P+
Sbjct: 131 AEHLYGSEEAFVQVMNTRAKELGLTNTNFANSNGLPAEGHVMSARDISTLARYLIQNYPK 190

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            +             +  N N  +G F GADG+KTG+T  +G+ IV +A Q  Q +I V+
Sbjct: 191 ILELESTTEYTYNNIRQFNRNPLLGVFPGADGLKTGWTEEAGYCIVGTAQQNGQRMIGVV 250

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTT 299
           L       R+K    LL+ GF N       N        +       +    +  ++ T 
Sbjct: 251 LKTSSEKERSKAIQELLNYGFKNFKQVTVKNAGEIVDSIEVKNGKKLSVSLKLDSDISTV 310

Query: 300 QKEIINYNTQMKEAKDKESHFIDF--------EKITLLKNKI 333
                  + Q+  +K  E               ++ L    I
Sbjct: 311 IPVGRENDLQIVTSKKAEFLNAPVSLDIPAGTVEVQLDGKTI 352


>gi|312793772|ref|YP_004026695.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180912|gb|ADQ41082.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 386

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 19/350 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-------------IAETNKLPYYTLLDTNTGHVIAENYP 47
           MR+ +  + + ++      ++              +         L+D +TG ++ E   
Sbjct: 1   MRKTITFLIVFLMLFGNSHIACKKVFGESLQTQTPSLEISAKSAILVDFDTGRILYEKNS 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
               +PAS+TK+MT  ++   +++ +  L+  +  S+NAS    S    K+   MT++  
Sbjct: 61  HEKLSPASITKIMTMILICEAIEKGRIKLSDRVVASQNASSLGGSQVYLKENEEMTVEEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + SAND  VA+AE +  + ++FV  MN  +K LG+  T+F+N +G+    HYT+A
Sbjct: 121 LKSIAIASANDACVALAEHIAGSVQEFVYMMNKKAKELGMLDTNFVNPYGLDAENHYTSA 180

Query: 168 RDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            D+AI+S  +      +      +  +        NTN  V  + G  G+KTG T  + F
Sbjct: 181 YDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNTNKLVRFYRGCTGVKTGSTDKAKF 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQ 282
            + ASA++    LIAVI+GA D  TR   +  LL  GF N +     +            
Sbjct: 241 CVSASALRNGLHLIAVIMGAPDSKTRFNEATKLLDWGFANFSMYSPYSKGYCFGKVKIKN 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                    +S +V    K+      + K A  ++      +    +   
Sbjct: 301 GIEKEVEAILSTDVKLLVKKGDESTVESKVALPQQ-ISAPVKAGQKIGKL 349


>gi|152981033|ref|YP_001354938.1| D-alanyl-D-alanine carboxypeptidase [Janthinobacterium sp.
           Marseille]
 gi|151281110|gb|ABR89520.1| D-alanyl-D-alanine carboxypeptidase (peptidase family s11)
           [Janthinobacterium sp. Marseille]
          Length = 382

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 13/344 (3%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L  IA  +LS  + F     + T     + LLD  +  V+A N PD    PASLTK
Sbjct: 1   MKKLLAAIAATVLSLSSAFAQSVPSPTINAKSWLLLDATSNQVLASNEPDMRIEPASLTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSA 116
           LMTAYV F+ +++KK  L   ITIS NA +  P  S    +    + +++ L  LIV+S 
Sbjct: 61  LMTAYVAFTAIQDKKLDLNQMITISTNAWKVDPSSSKMFIEPRVPVKVNDLLYGLIVQSG 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND AVAIAE++  TE  FV  MN  ++ +G+ +THF N HG+    +Y+TARD+++L+  
Sbjct: 121 NDAAVAIAEAVAGTEDAFVALMNREAERMGMKSTHFANPHGLPSASNYSTARDLSVLASH 180

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-- 234
           +  D P++   +  K       K PN N  +      DGMKTG+T  +G+ ++++A +  
Sbjct: 181 LINDHPEFYKIYSTKEYTYNNIKQPNRNRLLWLDPTVDGMKTGYTQGAGYCLISTAKRPN 240

Query: 235 --GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNE 288
             G++ LI+V+LG +    R + S  LL+ GF N    K           + ++   ++ 
Sbjct: 241 GTGERRLISVVLGTISDQARAQESQKLLNWGFLNFDTVKLYAKNEPIATPNVWKGTQNSI 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +V  T  + +    +   A+ K+      +K + +   
Sbjct: 301 KIGFTRDVYITVPKGVANTMKPVLAR-KDPLVAPIDKNSQVGTI 343


>gi|75762410|ref|ZP_00742280.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218899237|ref|YP_002447648.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           G9842]
 gi|228967109|ref|ZP_04128145.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar sotto str. T04001]
 gi|74490103|gb|EAO53449.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218543204|gb|ACK95598.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           G9842]
 gi|228792478|gb|EEM40044.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 396

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAQKNGMRVISVVMGAPTSKERNNEVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   I    S+ V    K+  + +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKIDLVASDNVSLLMKKGESMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|34498549|ref|NP_902764.1| D-ala-D-ala-carboxypeptidase [Chromobacterium violaceum ATCC 12472]
 gi|34104404|gb|AAQ60762.1| D-ala-D-ala-carboxypeptidase [Chromobacterium violaceum ATCC 12472]
          Length = 381

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 91/344 (26%), Positives = 150/344 (43%), Gaps = 11/344 (3%)

Query: 1   MRQFLVIIAMAMLSNIF------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++    +  + L+          F+          Y LLD N+  V+A   PD    PA
Sbjct: 1   MKKLTTALVASALALPSLGFANTAFVPPTPEIAGKAYYLLDYNSQQVLAARDPDARIEPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMTAY+ F  LKEK+  L   +T+S+   +   S           +D+ +K +IV+
Sbjct: 61  SLTKLMTAYLTFKALKEKRLSLEQTLTVSQRGWKTEGSRMFLDPKVPAKVDDLIKGMIVQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  V +AE++  +E  F Q M   +  LG+  T F NA G+   GHYTT  D+ IL+
Sbjct: 121 SGNDACVTLAEAIAGSEDVFGQLMTQQALKLGMKNTQFKNATGLPHEGHYTTVHDLGILA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  D+P++   + +K       K PN N  +      DGMKTG+T ++G+N+V S+ +
Sbjct: 181 AALIRDYPEFYPIYSMKSFTYNNIKQPNRNLLLYRDPNVDGMKTGYTDSAGYNMVTSSHR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVP 290
             + +I+V++G      R   S+ LL+ G       K      +      Y+ +      
Sbjct: 241 DGRRVISVVVGTASPEARAVESSKLLNYGLQFFDTPKLYAANTRVSDVSVYKGSEKIVPV 300

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               +V  T  +      +      +       +   ++     
Sbjct: 301 GFGSDVFATVAKGQAAKLKADMTTMQP-LIAPIKAGQVVGKLTV 343


>gi|218230756|ref|YP_002368880.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           B4264]
 gi|218158713|gb|ACK58705.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           B4264]
          Length = 396

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGGALGTLVIKK 360


>gi|90416209|ref|ZP_01224141.1| D-ala-D-ala-carboxypeptidase [marine gamma proteobacterium
           HTCC2207]
 gi|90331934|gb|EAS47148.1| D-ala-D-ala-carboxypeptidase [marine gamma proteobacterium
           HTCC2207]
          Length = 391

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 153/349 (43%), Gaps = 18/349 (5%)

Query: 1   MRQFLVIIAMAMLSN-------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++++LV  A  +LS            +          Y L+D NTGH++ EN  D P  P
Sbjct: 2   LKKYLVSFAAIVLSLQGLSAVQAQQLIPAPPELAAKAYILIDANTGHILVENNADMPLPP 61

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKGSTMTLDNAL 108
           ASL K+MT Y+V + +   +      + IS NA      +   S       + +++ + +
Sbjct: 62  ASLVKMMTTYIVSNEIAAGRMSKDETVLISDNAWEKGGAKTDGSTMFLNPRTRVSVSDLM 121

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + +I++S ND ++A+AE +   E  F   MN+ +  LG+ +T ++N+ G+   G  +TAR
Sbjct: 122 RGVIIQSGNDASIALAEHISGDEAAFADVMNHQASLLGMDSTQYLNSTGLPYEGMVSTAR 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           D+++L+  I  D P++   +  K  +      PN N  +      DG+KTG T A+G+ +
Sbjct: 182 DLSLLARAIIQDHPEHYSIYSEKYFKYNNINQPNRNRLLWRDSSVDGLKTGHTNAAGYCL 241

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII-----KDFYQQ 283
           V+SA + D  LI+V++GA     R + +  LLS GF +   +   +           +  
Sbjct: 242 VSSAKRRDMRLISVVMGADSDKARARETQKLLSYGFRHYDTKTIYSAGDILKENAKVWYG 301

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                   I+E V  T               D E           L   
Sbjct: 302 EEGFLNLTIAENVTLTLPRGAQKELSANILVD-EQIKAPIAAGQELGRL 349


>gi|269467932|gb|EEZ79667.1| D-alanyl-D-alanine carboxypeptidase [uncultured SUP05 cluster
           bacterium]
          Length = 379

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/340 (30%), Positives = 158/340 (46%), Gaps = 6/340 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++ + ++A+A         +       A +     Y +LD N+G VIA + P     PAS
Sbjct: 8   KKLIKLLAIATSVVTLNTQAAIFITPKAPSISASSYIVLDYNSGKVIASHKPHDKRAPAS 67

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTKLMTAYVVF  +K+ +A L   + ISK A +   S S  + G T+ L   LK +I++S
Sbjct: 68  LTKLMTAYVVFQLIKDGRASLEDDVRISKKAWKTMGSKSFVEVGKTIKLKILLKGMIIQS 127

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVA+AE +  TE  F  +MN  +  LG++ T F NA G+     +TTA DMA L+ 
Sbjct: 128 GNDAAVALAEHIAGTEGTFTAYMNQYAAELGMNNTRFENASGLDYKDQHTTASDMAKLAS 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
               DFP++  ++  K       K  N N  + +    DG+KTGFT  + +N+VASA + 
Sbjct: 188 ATIRDFPEFYPWYSEKEFTYHDIKQRNRNKLLWSDNTVDGLKTGFTEKAQYNLVASANRM 247

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
              LI+V+LG+    +R   +  +L  GF     R       K     +  +E+    + 
Sbjct: 248 GMRLISVVLGSSSGESRTAQTQKVLDYGFRFFETRIIDKINQKIPIANSTKDEIKVSLKN 307

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                     Y    +  K   +      K   +   + K
Sbjct: 308 STNVTLPRGQYKLSQQAIKLNANLSAPINKGDSVGYLVIK 347


>gi|323227523|gb|EGA11683.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
          Length = 402

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKPEVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|297529521|ref|YP_003670796.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. C56-T3]
 gi|297252773|gb|ADI26219.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. C56-T3]
          Length = 391

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
            ++     L++ +TG V+ E     P  PAS+TK+MT  +V   + E K      +  S+
Sbjct: 36  ADEAKSAILIERDTGKVLYEKNAHEPLPPASMTKIMTMLLVMEAIDEGKLSYDEKVRASE 95

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G  MT+D  L+ + + SAND +VA+AE +  +E+ FV+ MN  +K 
Sbjct: 96  YAASMGGSQIFLEPGEEMTVDELLRGIAIGSANDASVAMAEQIAGSEEAFVEMMNEKAKQ 155

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI----KGLEIKGKKY 200
           LGL  THF NA G+    HY++A DMA+++  +        +  +     +    K    
Sbjct: 156 LGLKNTHFANATGLPAEHHYSSAYDMAMMARELLKYEDITKYTSKYEDYLRENTDKKFWL 215

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTG+T  + + + A+A +    +IAV+ GA    +RN     +L
Sbjct: 216 VNTNRLVKFYPGVDGLKTGYTAEAKYCLTATAKKNGMRVIAVVFGAPTPKSRNAQITKML 275

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              F                  +  +   S+     SE V    K+  +     K  K K
Sbjct: 276 DYAFSQYRTHPVYKRNETVARVNISKGKRSSVEAVTSEPVSVLTKKGQSVEQIEKVIKVK 335

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++      K   L   I K+
Sbjct: 336 DNVKAPVRKGGELGVLILKQ 355


>gi|30022162|ref|NP_833793.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29897719|gb|AAP10994.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 396

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDGVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|206971113|ref|ZP_03232064.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           AH1134]
 gi|228960342|ref|ZP_04121995.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229129356|ref|ZP_04258327.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-Cer4]
 gi|229152278|ref|ZP_04280471.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus m1550]
 gi|296504570|ref|YP_003666270.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|206733885|gb|EDZ51056.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           AH1134]
 gi|228631240|gb|EEK87876.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus m1550]
 gi|228653961|gb|EEL09828.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-Cer4]
 gi|228799366|gb|EEM46330.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|296325622|gb|ADH08550.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 396

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|228954361|ref|ZP_04116387.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228805293|gb|EEM51886.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 396

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRIISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|67906493|gb|AAY82600.1| predicted penicillin-binding protein 6 precursor [uncultured
           bacterium MedeBAC35C06]
          Length = 380

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 7/338 (2%)

Query: 1   MRQFLVI--IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L +      +      F++ A    L  Y L++  TG VIAE   D    PAS+TK
Sbjct: 1   MKKLLTLLLFTSCLELYSQSFVAPAPKLDLKAYILIEPQTGTVIAEYNSDLHVEPASMTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT YVV   +      L   + IS+ A     S    + G  +++++ LK +I++S ND
Sbjct: 61  IMTGYVVADQIGNDLINLNDSVLISERAWRMGGSKMFIEAGKRVSVEDLLKGVIIQSGND 120

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE    TE+ FV  MN  +++LG++ T F+N+ G+   GHY++A+D+A L+    
Sbjct: 121 ASVALAEYSGGTEEGFVDLMNAYAQSLGMNNTTFLNSTGLPAEGHYSSAKDLAYLTSNFI 180

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             FP+    ++ K  E    K  N N  +     +DG+KTG T ++G+ +V SA +G   
Sbjct: 181 NKFPEIYSLYKEKSFEFNSIKQLNRNKLLWRDDSSDGVKTGHTESAGYCLVGSAKRGGMR 240

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           LI V+ G+     R   +  LL  GF   + ++ +           +    S     ++ 
Sbjct: 241 LITVVAGSSSDKKRFDDTQRLLEYGFRFFSTQEVLKKDQVYKTVKVWGGQKSEAGLGVAA 300

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T   +   + Q+     K +     +K  ++ + 
Sbjct: 301 NQILTLPRVDFKDLQINYI-YKNNIQAPIKKGDVIGSI 337


>gi|134096155|ref|YP_001101230.1| D-alanyl-D-alanine carboxypeptidase [Herminiimonas arsenicoxydans]
 gi|133740058|emb|CAL63109.1| Putative penicillin-binding (D-alanyl-d-alanine carboxypeptidase)
           transmembrane protein [Herminiimonas arsenicoxydans]
          Length = 382

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 98/344 (28%), Positives = 173/344 (50%), Gaps = 13/344 (3%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++    +A+A+LS    F  +  A T     + LLD  +  ++A N  D    PASLTK
Sbjct: 1   MKKLFAALAVAVLSLSTAFAQVVPAPTIAAKSWLLLDATSNQILASNEADVRIEPASLTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS--NSTFKKGSTMTLDNALKLLIVKSA 116
           LMTAYV FS +++K+  L   IT+S NA +  P       +    +++++ L  LIV+S 
Sbjct: 61  LMTAYVAFSAIQDKRIALNQMITVSTNAWKVDPESSKMFIEPRVPVSVNDLLYGLIVQSG 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND AVA+AE++  TE  F   MN  ++ +G+ +T F N HG+    +Y+TARD+A+L+  
Sbjct: 121 NDAAVALAEAVAGTEDAFAALMNREAERMGMKSTRFANPHGLPSPNNYSTARDLAVLATH 180

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-- 234
           + +D P++   +  K       K  N N  +      DGMKTG+T  +G+ ++++A +  
Sbjct: 181 LVSDHPEFYKIYSTKDFTYNKIKQSNRNRLLWLDPTVDGMKTGYTQNAGYCLISTAKRPN 240

Query: 235 --GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNE 288
              ++ LI+V++G      R + S  LL+ GF N    K  +  +     + ++ + +  
Sbjct: 241 GANERRLISVVIGTASDQARAQESQKLLNWGFQNFDAVKLYSKDVAIDTPNVWKGSQNKI 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +V  T  + +    +   A+ K+      +K + +   
Sbjct: 301 KIGFTRDVFVTVPKGMAGKIKPVLAR-KDPLVAPIDKNSPVGTV 343


>gi|217961569|ref|YP_002340139.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           AH187]
 gi|222097526|ref|YP_002531583.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|217065681|gb|ACJ79931.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           AH187]
 gi|221241584|gb|ACM14294.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
          Length = 396

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|228941227|ref|ZP_04103780.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228974159|ref|ZP_04134729.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228980751|ref|ZP_04141056.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis Bt407]
 gi|228778920|gb|EEM27182.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis Bt407]
 gi|228785499|gb|EEM33508.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228818386|gb|EEM64458.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|326941850|gb|AEA17746.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 396

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|330445965|ref|ZP_08309617.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490156|dbj|GAA04114.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 391

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/356 (26%), Positives = 156/356 (43%), Gaps = 20/356 (5%)

Query: 1   MRQFLVIIAM----------AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++   + ++                   +  A T     Y L+D NTG V+ E   +  
Sbjct: 1   MKKTSPLFSLVGVTALCTVSFSALAAPSVIPDAPTLSAKGYVLMDYNTGQVLVEKNANEK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNA 107
            NPASLTKLMT+YV    +K+        + IS+NA        S    + GS + L + 
Sbjct: 61  LNPASLTKLMTSYVAGQEMKQGNISKDDVVVISRNAWARNFPDSSKMFIEVGSEVPLMDL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            + LI++S ND +VAIAE +  +E+ FV  MN+ +K LG++++HF N HG+     YTT 
Sbjct: 121 FRGLIIQSGNDASVAIAEHVAGSEQAFVGLMNSWAKKLGMNSSHFANPHGLDHGDLYTTP 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGF 226
            D+A+L   +  D P     +  K          N N       +  DGMKTG+T  +G+
Sbjct: 181 YDIALLGQALIRDLPNIYPLYSEKSFTYNNITQRNRNGLLHDKSMNVDGMKTGYTSGAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD------F 280
           ++ +SA +GD  LIAV++G      R   S +LL+ GF             K       F
Sbjct: 241 SLTSSATEGDMRLIAVVMGTKSTKIRESESKALLNYGFRFFETVVPHKAGDKIISERVWF 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +       + S  V  ++ +       ++   + ++     E++  +   +  K
Sbjct: 301 GNKENVELGVDKSSYVTLSRNDTKKLTASVELNGELDAPIAKGEEVGKVLYLVDGK 356


>gi|56420846|ref|YP_148164.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus kaustophilus
           HTA426]
 gi|261417853|ref|YP_003251535.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC61]
 gi|319767335|ref|YP_004132836.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC52]
 gi|56380688|dbj|BAD76596.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Geobacillus kaustophilus HTA426]
 gi|261374310|gb|ACX77053.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC61]
 gi|317112201|gb|ADU94693.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC52]
          Length = 391

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
            ++     L++ +TG V+ E     P  PAS+TK+MT  +V   + E K      +  S+
Sbjct: 36  ADEAKSAILIERDTGKVLYEKNAHEPLPPASMTKIMTMLLVMEAIDEGKLSYDEKVRASE 95

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G  MT+D  L+ + + SAND +VA+AE +  +E+ FV+ MN  +K 
Sbjct: 96  YAASMGGSQIFLEPGEEMTVDELLRGIAIGSANDASVAMAEQIAGSEEAFVEMMNEKAKQ 155

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI----KGLEIKGKKY 200
           LGL  THF NA G+    HY++A DMA+++  +        +  +     +    K    
Sbjct: 156 LGLKNTHFANATGLPAEHHYSSAYDMAMMARELLKYEDITKYTSKYEDYLRENTDKKFWL 215

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTG+T  + + + A+A +    +IAV+ GA    +RN     +L
Sbjct: 216 VNTNRLVKFYPGVDGLKTGYTAEAKYCLTATAKKNGMRVIAVVFGAPTPKSRNAQITKML 275

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              F                  +  +   S+     SE V    K+  +     K  K K
Sbjct: 276 DYAFSQYRTHPVYKRNETVARVNISKGKRSSVEAVTSEPVSVLTKKGQSVEQIEKVIKVK 335

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++      K   L   I K+
Sbjct: 336 DNVKAPVRKGDELGVLILKQ 355


>gi|261367341|ref|ZP_05980224.1| serine-type D-Ala-D-Ala carboxypeptidase [Subdoligranulum variabile
           DSM 15176]
 gi|282570101|gb|EFB75636.1| serine-type D-Ala-D-Ala carboxypeptidase [Subdoligranulum variabile
           DSM 15176]
          Length = 405

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 8/323 (2%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
            I P  +           L+D ++G V+ E   D     AS+TK+MT  + F  L+ +K 
Sbjct: 42  TITPAGTSEFDVPCEAAILVDEDSGTVLYEKNADEQRPIASITKVMTLLLTFQALESRKI 101

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   + +S++A     S    + G  MTL++ LK + V SAND AVA+AE +  +E  F
Sbjct: 102 SLEDNVPVSEHAYSMGGSQIWLEPGEQMTLNDMLKAICVSSANDAAVAVAEFVGGSEPAF 161

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN T+  LG+++THF NA G+ Q GH ++ARD+AI+S  +     +   Y  I    
Sbjct: 162 VQMMNETAAQLGMTSTHFENACGLDQEGHLSSARDVAIMSREMLLHHTEVRDYCSIWTDT 221

Query: 195 --IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                 +  NTN  + ++ G  G+KTG T  +G  I ASA +    LIAV+LG+     R
Sbjct: 222 LRNGATQLVNTNKLLKSYNGITGLKTGTTSKAGVCISASAERNGLRLIAVVLGSASGKER 281

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK------EIINY 306
            + + +LL  GF N  +                      ++ E  T QK      +  N 
Sbjct: 282 FQAATALLDYGFANFENITAELPDDAPQTIPVTRGTADAVALEYDTPQKCLVPKGQGENL 341

Query: 307 NTQMKEAKDKESHFIDFEKITLL 329
             +++  +  ++      ++  +
Sbjct: 342 RIEVELPQTLQAPVKAGSQVGTV 364


>gi|125972794|ref|YP_001036704.1| penicillin-binding protein 6 [Clostridium thermocellum ATCC 27405]
 gi|256004983|ref|ZP_05429955.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 2360]
 gi|125713019|gb|ABN51511.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Clostridium thermocellum ATCC 27405]
 gi|255991052|gb|EEU01162.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 2360]
 gi|316940970|gb|ADU75004.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 1313]
          Length = 384

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/342 (26%), Positives = 146/342 (42%), Gaps = 14/342 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             VI    M+  +  F      +      L++ +TG V+ E   D P  PAS+TK+MT  
Sbjct: 13  LAVITFFVMMFQVKAF--AQFESSAQSAILIEASTGQVLYEKNADVPMPPASITKIMTLL 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  L++        + IS+ A     S      G        +  + V SAND  VA+
Sbjct: 71  LGFEALEKGLVKWDDEVIISEKAWRMEGSKMFLLVGDKAKFGEIMTGISVVSANDGCVAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE L  +E+ FVQ MN  +K LGL+ T+F N++G+   GH  +ARD++ L+  +  ++P+
Sbjct: 131 AEHLYGSEEAFVQVMNTRAKELGLTNTNFANSNGLPAEGHVMSARDISTLARYLIQNYPK 190

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            +             +  N N  +G F GADG+KTG+T  +G+ IV +A Q  Q +I V+
Sbjct: 191 ILELESTTEYTYNNIRQFNRNPLLGVFPGADGLKTGWTEEAGYCIVGTAQQNGQRMIGVV 250

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTT 299
           L       R+K    LL+ GF N       N        +       +    +  ++ T 
Sbjct: 251 LKTSSEKERSKAIQELLNYGFKNFKQVTVKNAGEIVDSIEVKNGKKLSVSLKLDSDISTV 310

Query: 300 QKEIINYNTQMKEAKDKESHFIDF--------EKITLLKNKI 333
                  + Q+  +K  E               ++ L    I
Sbjct: 311 IPVGRENDLQIVTSKKAEFLNAPVSLDIPAGTVEVQLDGKTI 352


>gi|161503974|ref|YP_001571086.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865321|gb|ABX21944.1| hypothetical protein SARI_02067 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 400

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/340 (27%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+Y
Sbjct: 15  LVLLFLFASSVKAEEQTIAPPDVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAN 117
           VV   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S N
Sbjct: 75  VVGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGN 134

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +
Sbjct: 135 DACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKAL 194

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD
Sbjct: 195 IHDVPDEYALHKEKEFTFNNIRQPNRNRLLWSTNLQVDGMKTGTTSGAGYNLVASATQGD 254

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
             LI+V+LGA     R   S  LL+ GF        I      + +  +  +        
Sbjct: 255 MRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDQREVNLGA 314

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +    T       N +     ++       +K  ++   
Sbjct: 315 GDAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQIVGTI 354


>gi|229146650|ref|ZP_04275017.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-ST24]
 gi|228636820|gb|EEK93283.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-ST24]
          Length = 396

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGKKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|324327983|gb|ADY23243.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 396

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 96/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQDKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   I    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKIDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|238893899|ref|YP_002918633.1| D-alanyl-D-alanine carboxypeptidase fraction C [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238546215|dbj|BAH62566.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 428

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  +A        L  A +     + L+D  +G V++E   D   +PASLTK+MT+YVV
Sbjct: 45  LLFLVAPAVQAAEQLPDAPSINARAWILMDYASGKVLSEGNADEKLDPASLTKIMTSYVV 104

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K  LT  +T+ ++A           S    K G  +++++  K +I++S ND 
Sbjct: 105 GQAIKAGKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGMQVSVEDLNKGVIIQSGNDA 164

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++AIA+ +  ++  FV  MN  +K +GL+ T FM  HG+   G ++TARDMA+L+  +  
Sbjct: 165 SIAIADYVAGSQDAFVSLMNGYAKKMGLTNTTFMTVHGLDAPGQFSTARDMALLTKAMIH 224

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L ADG+KTG T  +G+N+V+SA QGD  
Sbjct: 225 DVPEEYAVHKEKEFTFNKIRQPNRNRLLWSSNLNADGVKTGTTAGAGYNLVSSATQGDMR 284

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LIAV+LG      R   S  LL+ GF        I      + +  +  + +       E
Sbjct: 285 LIAVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDSNEAKLGAGE 344

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T  +    N +     ++       EK  ++   
Sbjct: 345 AGSITLPKGQLKNLKASYTLNQPQLTAPLEKGQVVGTI 382


>gi|188025727|ref|ZP_02959597.2| hypothetical protein PROSTU_01468 [Providencia stuartii ATCC 25827]
 gi|188020262|gb|EDU58302.1| hypothetical protein PROSTU_01468 [Providencia stuartii ATCC 25827]
          Length = 402

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 86/329 (26%), Positives = 144/329 (43%), Gaps = 11/329 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K 
Sbjct: 32  FPNSPVPAVPEIDAEAYILIDYNSGKVLAEKNADQRRDPASLTKMMTSYVIGQAIKSGKI 91

Query: 75  MLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                +T++++A                K G  +++    + + ++S ND  VA+A+ + 
Sbjct: 92  GAEDIVTVNEDAWATGNPIFKGSSLMFLKPGDRVSVSQLTRGINLQSGNDACVAMADYVA 151

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
             +  F+Q MN     LGL  THF   HG+   G Y++ARDMA+L   +  D P     +
Sbjct: 152 GDQANFIQLMNGYVSKLGLQNTHFQTVHGLDAEGQYSSARDMALLGQALIRDVPDEYAIY 211

Query: 189 QIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           + K       +  N N       L  DG+KTG T A+G+N+VASA +G   LI+V++G  
Sbjct: 212 KEKEFTFNNIRQTNRNGLLWDKSLSVDGIKTGHTNAAGYNLVASATEGQMRLISVVMGGK 271

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEI 303
               R+  S  LL+ GF      K +   +    +  +  + +N    ++E++  T    
Sbjct: 272 SMKGRDAESKKLLTYGFRFYETVKPLQAGVEFASEPVWFGDENNVKLGVTEDLFLTIPRG 331

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + +              +K   +   
Sbjct: 332 RLKDLKASYDISTSELEAPLKKGQAVGTI 360


>gi|42783191|ref|NP_980438.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10987]
 gi|229174752|ref|ZP_04302276.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus MM3]
 gi|42739119|gb|AAS43046.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10987]
 gi|228608742|gb|EEK66040.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus MM3]
          Length = 396

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|30264153|ref|NP_846530.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. Ames]
 gi|47529591|ref|YP_020940.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49186984|ref|YP_030236.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Sterne]
 gi|49478519|ref|YP_038135.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141418|ref|YP_085412.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|165871194|ref|ZP_02215844.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0488]
 gi|167633524|ref|ZP_02391848.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0442]
 gi|167639446|ref|ZP_02397717.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0193]
 gi|170687106|ref|ZP_02878324.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0465]
 gi|170705633|ref|ZP_02896096.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0389]
 gi|177652667|ref|ZP_02935083.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0174]
 gi|190566126|ref|ZP_03019045.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           Tsiankovskii-I]
 gi|196034968|ref|ZP_03102375.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus W]
 gi|196038612|ref|ZP_03105920.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           NVH0597-99]
 gi|196045795|ref|ZP_03113024.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           03BB108]
 gi|218905213|ref|YP_002453047.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           AH820]
 gi|225866062|ref|YP_002751440.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           03BB102]
 gi|227816855|ref|YP_002816864.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. CDC 684]
 gi|228916716|ref|ZP_04080281.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229602274|ref|YP_002868377.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0248]
 gi|254683845|ref|ZP_05147705.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721680|ref|ZP_05183469.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. A1055]
 gi|254736192|ref|ZP_05193898.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Western North America USA6153]
 gi|254744081|ref|ZP_05201764.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. Kruger
           B]
 gi|254754139|ref|ZP_05206174.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Vollum]
 gi|254758171|ref|ZP_05210198.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Australia 94]
 gi|301055572|ref|YP_003793783.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis CI]
 gi|30258798|gb|AAP28016.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. Ames]
 gi|47504739|gb|AAT33415.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49180911|gb|AAT56287.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Sterne]
 gi|49330075|gb|AAT60721.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51974887|gb|AAU16437.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|164713113|gb|EDR18640.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0488]
 gi|167512505|gb|EDR87880.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0193]
 gi|167530930|gb|EDR93617.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0442]
 gi|170129173|gb|EDS98037.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0389]
 gi|170668723|gb|EDT19468.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0465]
 gi|172082002|gb|EDT67070.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0174]
 gi|190563045|gb|EDV17011.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992507|gb|EDX56468.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus W]
 gi|196023235|gb|EDX61913.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           03BB108]
 gi|196030335|gb|EDX68934.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           NVH0597-99]
 gi|218534801|gb|ACK87199.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           AH820]
 gi|225785916|gb|ACO26133.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus cereus
           03BB102]
 gi|227005442|gb|ACP15185.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. CDC 684]
 gi|228842903|gb|EEM87986.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229266682|gb|ACQ48319.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Bacillus anthracis
           str. A0248]
 gi|300377741|gb|ADK06645.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 396

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQDKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|163941818|ref|YP_001646702.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163864015|gb|ABY45074.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 396

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 155/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  L   +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLNDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLRENTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-- 278
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 279 --DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +          S+ V    K+  N +   +E   ++      +K   L   + K+
Sbjct: 301 TVQVGKGKEEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKR 360


>gi|302879284|ref|YP_003847848.1| Beta-lactamase [Gallionella capsiferriformans ES-2]
 gi|302582073|gb|ADL56084.1| Beta-lactamase [Gallionella capsiferriformans ES-2]
          Length = 381

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 155/345 (44%), Gaps = 9/345 (2%)

Query: 1   MRQFLVIIAMAMLSNIFP-FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+ FL    + +    +              Y L D ++  ++          PASLTKL
Sbjct: 1   MKSFLFFAGLLLSFTSYALQQPEPPVLASKSYLLYDFSSNQILVNQNGHARLEPASLTKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSAN 117
           MTAY+ FS +K+ K  L   +T+  +A       S    K G ++T+D  L  LIV+S N
Sbjct: 61  MTAYLTFSAIKQDKLKLDQTLTVPVDAPRNSSGESRMLLKPGQSVTVDELLHGLIVQSGN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D A  +A  +  +E  FV+ MN  ++ +G+  THF+N  G+    HY++A DMAIL+  +
Sbjct: 121 DAANTLAVQISGSEATFVEQMNKEAQRMGMKNTHFVNPVGMPNAQHYSSAYDMAILAAAL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             D+P++   F ++          N N  +     ADG+KTG T  +GF +V SA +  +
Sbjct: 181 IRDYPEHYPLFGLRDYTFNNVTQANRNRLLWLDPYADGLKTGHTETAGFCLVGSAKRDKR 240

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNIS 293
            LI+V+LGA   N R   S  LL+ GF +    +             ++   S+      
Sbjct: 241 RLISVVLGADSDNQRASESQKLLNYGFQSFDAVRLYQNSQPVTKVRVWKGTESHLDLGFR 300

Query: 294 EEV--CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +++     +         ++  +   +     +++ +LK  +  K
Sbjct: 301 QDIFLTIPKGSFAQLKATLETHQPILAPITSGQQMGVLKLSLNGK 345


>gi|119713334|gb|ABL97398.1| D-alanyl-D-alanine carboxypeptidase [uncultured marine bacterium
           EB80_02D08]
          Length = 385

 Score =  217 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/336 (28%), Positives = 161/336 (47%), Gaps = 7/336 (2%)

Query: 1   MRQFLVII-AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ L I+ +++ +     F+  A    +  Y L++ NT  +IAE   +    PAS+TK+
Sbjct: 1   MKKILFILLSISTIGESQSFVPDAPELDVKSYILIEPNTNTIIAEYNSESEIEPASMTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT+YVV   +      L   + IS+ A     S +  + G  +T+ + LK ++++S ND 
Sbjct: 61  MTSYVVADQISNGLISLDDEVLISEKAWRMKGSKTFIEAGKKVTVSDLLKGIMIQSGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VAIAE    TE+ FV  MN+ + +LG++ T F NA G+    H+++A+D+A L+     
Sbjct: 121 SVAIAEYAGGTERGFVDLMNSYASSLGMNNTIFQNATGLPDENHFSSAKDLANLTSNYIN 180

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FP+    ++ K       K  N N  +      DG+KTG T A+G+ +V SA +G   L
Sbjct: 181 KFPEEYALYKQKEFTFNNIKQLNRNKLLWRDDSTDGVKTGHTEAAGYCLVGSAKRGGMRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNISEE 295
           I V+ G+   N R   S  LL  GF   T +K +     Y     +     +    + E+
Sbjct: 241 ITVVAGSKSDNDRFLSSQRLLEYGFRFYTTQKMLIAEKEYQTITIWGGEEKSLGVGVLED 300

Query: 296 VCTTQKEI--INYNTQMKEAKDKESHFIDFEKITLL 329
           +  T       +  T  K   + ++     +K+  L
Sbjct: 301 ISITLPRTSFKDVKTIYKVNNNIQAPIKIGQKVGTL 336


>gi|262041066|ref|ZP_06014285.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259041624|gb|EEW42676.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 400

 Score =  217 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  +A        L  A +     + L+D  +G V++E   D   +PASLTK+MT+YVV
Sbjct: 17  LLFLVAPAVQAAEQLPDAPSIDARAWILMDYASGKVLSEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K  LT  +T+ ++A           S    K G  +++++  K +I++S ND 
Sbjct: 77  GQAIKAGKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGMQVSVEDLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++AIA+ +  ++  FV  MN  +K +GL+ T FM  HG+   G ++TARDMA+L+  +  
Sbjct: 137 SIAIADYVAGSQDAFVSLMNGYAKKMGLTNTTFMTVHGLDAPGQFSTARDMALLTKAMIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L ADG+KTG T  +G+N+V+SA QGD  
Sbjct: 197 DVPEEYAVHKEKEFTFNKIRQPNRNRLLWSSNLNADGVKTGTTAGAGYNLVSSATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LIAV+LG      R   S  LL+ GF        I      + +  +  + +       E
Sbjct: 257 LIAVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDSNEAKLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T  +    N +     ++       EK  ++   
Sbjct: 317 VGSITLPKGQLKNLKASYTLNQPQLTAPLEKGQVVGTI 354


>gi|47568129|ref|ZP_00238833.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
 gi|47555119|gb|EAL13466.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
          Length = 396

 Score =  217 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQEKTEETTPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|83593039|ref|YP_426791.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodospirillum rubrum
           ATCC 11170]
 gi|83575953|gb|ABC22504.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodospirillum rubrum
           ATCC 11170]
          Length = 388

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 86/334 (25%), Positives = 145/334 (43%), Gaps = 8/334 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +     +    + A   K  +  ++D +T  V+ +   D P  P+S++KLMTAY++F  
Sbjct: 11  FVLAAGLLTAMPAQAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFER 70

Query: 69  LKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           LK     L    ++S+NA          S      G+ + + + ++ +I++S ND  V +
Sbjct: 71  LKSGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVV 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE+L   E  F   MN  +K LGL+ +HF+NA G+    HY TA D+ +L+  I  DFP+
Sbjct: 131 AENLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPE 190

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           +   +        G    N N  +   +GADG+KTG T  +GF + ASA+Q  + L+ VI
Sbjct: 191 FYEIYGETKFTYNGIVQHNRNPLLYMNMGADGLKTGHTNIAGFGLTASAVQDGRRLLMVI 250

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCTTQ 300
            G      R++ +  L+S GF N      +                  VP +S       
Sbjct: 251 NGLQSNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDLKIT 310

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                    + +A  +       +    +   + 
Sbjct: 311 LPRAARRDMVAKAVFETPIPAPIQAGDRIATLVL 344


>gi|146329552|ref|YP_001209791.1| D-alanyl-D-alanine carboxypeptidase [Dichelobacter nodosus
           VCS1703A]
 gi|146233022|gb|ABQ14000.1| D-alanyl-D-alanine carboxypeptidase [Dichelobacter nodosus
           VCS1703A]
          Length = 375

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 4/335 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +    + + +L              +  Y L+D  +G ++AE   D    PAS+TKLMTA
Sbjct: 5   KKCCFVTVFLLFFGVRAEVPPPDLPVKSYLLMDAQSGQILAERAADERLPPASITKLMTA 64

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YV F+ LK  K  LT  +TIS NA     S    +  S +++++ L+ +IV+S ND +VA
Sbjct: 65  YVTFNALKTGKIHLTDLVTISANARAQNGSRMFVEVNSQVSVNDLLQGMIVQSGNDASVA 124

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  T   FV  MN T+K L L  TH+ N  G+    H++TA D+A L+  +  DFP
Sbjct: 125 LAEYIGGTVAGFVHMMNATAKQLDLQKTHYQNPTGMPDEQHFSTAHDIARLAQALIRDFP 184

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++ H++Q K       K PN N  +      DG+KTG+T A+G+ + AS  +GD  LI V
Sbjct: 185 EFYHFYQQKEFTWNNIKQPNRNRLLWRNQNVDGLKTGYTDAAGYCLAASEKRGDWRLIGV 244

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTT 299
           +LGA     R   + +LL+ GF N T    +     +++    + L  EVP ++E     
Sbjct: 245 VLGAEKEAQRYDAAENLLNFGFANYTQVTALRAEQVLLRGKVYKGLEAEVPIVAERTVHL 304

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               +     +      ++      K   +     
Sbjct: 305 LL-PVTAQNAISAHVALDTLIAPITKGQKVGTITV 338


>gi|296537403|ref|ZP_06899250.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseomonas cervicalis
           ATCC 49957]
 gi|296262269|gb|EFH09047.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseomonas cervicalis
           ATCC 49957]
          Length = 375

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 83/325 (25%), Positives = 151/325 (46%), Gaps = 6/325 (1%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+ ++                 L+D +TG V+ E   D    P+S++KLMT YVVF  LK
Sbjct: 12  AVPTSPASTPLGPLDTSARQALLMDADTGAVLLEKSADERMPPSSMSKLMTMYVVFDLLK 71

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           + +  L   + +S+ A     S    + GS ++++N  + +I++S ND  + +AE +  +
Sbjct: 72  QGRLRLDQTLPVSERAWRMGGSKMFVELGSAVSVENLARGVIIQSGNDACIVLAEGISGS 131

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E++F + +N  ++ LGL+ + F NA G     H  TARD+A L+  +  DFPQY  ++  
Sbjct: 132 EQQFAELLNEYARKLGLNDSTFRNATGWPDPEHRMTARDLATLARHLINDFPQYFAFYSE 191

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           +  +  G    N N  +G   GADG+KTG T  +G+ +  +  +GD+ LI V+ G     
Sbjct: 192 RSFQWNGINQENRNPLLGRVPGADGLKTGHTEDAGYGLTGTVKRGDRRLILVVNGLTSMR 251

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEE---VCTTQKEII 304
            R + S  L+  GF    +         +          + VP +  +   +   ++   
Sbjct: 252 ARGEESERLMEWGFREFENVVLFRAADTVEAAPVYLGEQSTVPLVGGKDMVLTLPRQWRR 311

Query: 305 NYNTQMKEAKDKESHFIDFEKITLL 329
           N   +++      +     +++  L
Sbjct: 312 NLTVKLRYNGPIPAPIAKGQEVGQL 336


>gi|168240742|ref|ZP_02665674.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194447475|ref|YP_002044893.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194405779|gb|ACF65998.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205340371|gb|EDZ27135.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 400

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 150/339 (44%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D ++G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYSSGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|152969428|ref|YP_001334537.1| D-alanyl-D-alanine carboxypeptidase fraction C [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|330008401|ref|ZP_08306219.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella sp. MS 92-3]
 gi|150954277|gb|ABR76307.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|328535160|gb|EGF61663.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella sp. MS 92-3]
          Length = 400

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  +A        L  A +     + L+D  +G V++E   D   +PASLTK+MT+YVV
Sbjct: 17  LLFLVAPAVQAAEQLPDAPSIDARAWILMDYASGKVLSEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K  LT  +T+ ++A           S    K G  +++++  K +I++S ND 
Sbjct: 77  GQAIKAGKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGMQVSVEDLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++AIA+ +  ++  FV  MN  +K +GL+ T FM  HG+   G ++TARDMA+L+  +  
Sbjct: 137 SIAIADYVAGSQDAFVSLMNGYAKKMGLTNTTFMTVHGLDAPGQFSTARDMALLTKAMIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L ADG+KTG T  +G+N+V+SA QGD  
Sbjct: 197 DVPEEYAVHKEKEFTFNKIRQPNRNRLLWSSNLNADGVKTGTTAGAGYNLVSSATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LIAV+LG      R   S  LL+ GF        I      + +  +  + +       E
Sbjct: 257 LIAVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDSNEAKLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T  +    N +     ++       EK  ++   
Sbjct: 317 AGSITLPKGQLKNLKASYTLNQPQLTAPLEKGQVVGTI 354


>gi|229186322|ref|ZP_04313487.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BGSC 6E1]
 gi|228597116|gb|EEK54771.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BGSC 6E1]
          Length = 396

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 1   MKRVFGILVCFMLLLSGTSVSFAQSEKMKQDKTEETAPKLAEQASSAIVIEQDTGKVLFD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 61  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 121 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 180

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 181 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 241 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 300

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 301 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 360


>gi|238913835|ref|ZP_04657672.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 400

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|65321470|ref|ZP_00394429.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
 gi|118479279|ref|YP_896430.1| D-alanyl-D-alanine carboxypeptidase DacF [Bacillus thuringiensis
           str. Al Hakam]
 gi|118418504|gb|ABK86923.1| D-Ala-D-Ala carboxypeptidase DacF, Serine peptidase, MEROPS family
           S11 [Bacillus thuringiensis str. Al Hakam]
          Length = 398

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 24/360 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M++   I+   ML      +S A++ K                     +++ +TG V+ +
Sbjct: 3   MKRVFGILVCFMLLLSGTSVSFAQSEKTKQDKTEETTPKLAEQASSAIVIEQDTGKVLFD 62

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P+    PAS+TK+MT  ++   +++ K  LT  +  S++A+    S    + G  MT+
Sbjct: 63  KNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHAASMGGSQIFLEPGEEMTV 122

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY
Sbjct: 123 NEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHY 182

Query: 165 TTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           +TA DMAI+                +   ++    K     NTN  V  + G DG+KTGF
Sbjct: 183 STANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWLVNTNKLVRFYPGVDGVKTGF 242

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + + + ASA +    +I+V++GA     RN     LL   F     +K      K  
Sbjct: 243 TTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLLDYAFGQYMTKKLYTRGEKIK 302

Query: 281 YQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             Q    +   +    S+ V    K+  N +   +E   ++      +K   L   + KK
Sbjct: 303 TVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKKVKAPIKKGDALGTLVIKK 362


>gi|163795501|ref|ZP_02189467.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium BAL199]
 gi|159179100|gb|EDP63633.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium BAL199]
          Length = 385

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 86/336 (25%), Positives = 141/336 (41%), Gaps = 10/336 (2%)

Query: 2   RQFLVII-AMAMLSNIFPFL------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R++L  +  +A+L    P +        A         L+D +TG V+ E        PA
Sbjct: 3   RRYLSFVGFLAVLVTTVPLILGGARPVAALDTSAREAILMDYDTGQVLFEKNSTELMPPA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT ++ F  LK+ +  +T  I IS+NA     S    + GS + L + L  +IV+
Sbjct: 63  SMTKIMTVFLAFERLKDGRLKMTDEIPISENAWRKGGSKMFVEVGSRVVLSDLLMGIIVQ 122

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  +A+AE++  +E+ F + M   ++ +GL  + F N+ G     H  TA D+A+L+
Sbjct: 123 SGNDATIALAEAISGSEEAFGELMTTRAREIGLERSVFRNSTGWPDPEHRMTAHDLAVLA 182

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                 FP Y   F          K  N N  +   +G DG+KTG T  +G+ +  SA +
Sbjct: 183 AETIRRFPDYYSLFSETSFTYNKIKQGNRNPLLYKAMGVDGLKTGHTENAGYGLTVSAKR 242

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPN 291
           GD+ LI V+ G      R+  S  L+  GF    +       +             +VP 
Sbjct: 243 GDRRLILVVNGLSSVRERSDESERLIEWGFREFENLTFAKKGVPVETAEVWLGDRPKVPL 302

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           +S+       +           +             
Sbjct: 303 VSDRDIVVAVKRAARKEMTVTVEYSGPIPAPIVAGQ 338


>gi|90578587|ref|ZP_01234397.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio angustum S14]
 gi|90439420|gb|EAS64601.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio angustum S14]
          Length = 391

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 98/351 (27%), Positives = 155/351 (44%), Gaps = 17/351 (4%)

Query: 1   MRQFLVIIAM----------AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++   + ++                   +  A T     Y L+D NTG V+ E   +  
Sbjct: 1   MKKTSPLFSLVGVTALCTVSFSSLAAPSVIPDAPTLSAKGYVLMDYNTGQVLVEKNANEK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNA 107
            NPASLTKLMT+YV    +K+        + IS+NA        S    + GS + L + 
Sbjct: 61  LNPASLTKLMTSYVAGQEIKQGNISKDDIVVISRNAWARNFPDSSKMFIEVGSEVPLMDL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            + LI++S ND +VA+AE +  +E+ FV  MN+ +K LG+++THF N HG+     YTT 
Sbjct: 121 FRGLIIQSGNDASVALAEHVAGSEQAFVGLMNSWAKKLGMNSTHFANPHGLDHSDLYTTP 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGF 226
            D+A+L   +  D P     +  K          N N       +  DGMKTG+T  +G+
Sbjct: 181 YDIALLGQALIRDLPSIYPLYSEKSFTYNNITQRNRNGLLYDKSMNVDGMKTGYTSGAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           ++ +SA +GD  LIAV++G     TR   S +LL+ GF             K   ++   
Sbjct: 241 SLTSSATEGDMRLIAVVMGTKSTKTRESESKALLNYGFRFFETVVPHKAGDKILSERVWF 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLKNKIT 334
               N+   V ++    ++ N   K     E         EK  ++   + 
Sbjct: 301 GNKENVELGVDSSSYVTLSRNDTKKLTASVELNGELDAPIEKGEVVGKVLY 351


>gi|288958656|ref|YP_003448997.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
 gi|288910964|dbj|BAI72453.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
          Length = 396

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 3/324 (0%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
               P  +           L+D  +  V+ E   D    P+S++K+MTAY+VF  +K  +
Sbjct: 33  FTAVPVQAATIDTIAKQAILVDLTSNTVLFEKNADERMAPSSMSKIMTAYMVFEAIKAGR 92

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L + + +S+ A     S    +  + + +D+ LK +IV+S ND  + +AE L  +E+ 
Sbjct: 93  LTLESTLPVSERAWRMQGSKMFVELHNNIKVDDLLKGMIVQSGNDACIVLAEGLAGSEQS 152

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F +     +K LGL +++F+NA G     HY TARD+AIL+ R+  DFP++  Y  I+  
Sbjct: 153 FAEQATKRAKELGLKSSNFVNATGWPDPNHYMTARDLAILAERLIKDFPEFYKYDSIREF 212

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           +  G    N N  +   +  DG+KTG T A G+ + AS  +  + L+ V+ G      R 
Sbjct: 213 KYHGITQGNRNPLLYRNMNVDGLKTGHTDAGGYGLTASGERDGRRLLLVVNGLPSMQARA 272

Query: 254 KVSASLLSMGFYNKTDRKKIN---YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             SA L+  GF              I +    Q   + VP    +  +      +     
Sbjct: 273 DESARLIEWGFREFASYTLYKGGETIEQVPVWQGEQDMVPVTVPQNLSVTMARTDRPGMK 332

Query: 311 KEAKDKESHFIDFEKITLLKNKIT 334
                        +K   +   + 
Sbjct: 333 VSLVSSAPVAAPLKKGDPVGKLVI 356


>gi|194735164|ref|YP_002113956.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195874051|ref|ZP_02700341.2| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197250312|ref|YP_002145817.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197300887|ref|ZP_02661864.2| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|198246085|ref|YP_002214828.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205357020|ref|ZP_02344188.2| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205358377|ref|ZP_02655826.2| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205359776|ref|ZP_02831975.2| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194710666|gb|ACF89887.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195630952|gb|EDX49538.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197214015|gb|ACH51412.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197290207|gb|EDY29564.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197940601|gb|ACH77934.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205324544|gb|EDZ12383.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205334736|gb|EDZ21500.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205343236|gb|EDZ30000.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
          Length = 426

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 42  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 101

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 102 VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 161

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 162 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 221

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 222 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 281

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 282 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAG 341

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 342 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 380


>gi|16759773|ref|NP_455390.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29142454|ref|NP_805796.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56414047|ref|YP_151122.1| D-alanyl-D-alanine carboxypeptidase subunit C [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179427|ref|YP_215844.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161614874|ref|YP_001588839.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|168263619|ref|ZP_02685592.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|194445951|ref|YP_002040103.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194470485|ref|ZP_03076469.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197262228|ref|ZP_03162302.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197362970|ref|YP_002142607.1| D-alanyl-D-alanine carboxypeptidase subunit C [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|200391099|ref|ZP_03217710.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205352115|ref|YP_002225916.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|207856297|ref|YP_002242948.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213583237|ref|ZP_03365063.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213612370|ref|ZP_03370196.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|224582675|ref|YP_002636473.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289827182|ref|ZP_06545924.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25297768|pir||AD0604 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16502066|emb|CAD05302.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138084|gb|AAO69645.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56128304|gb|AAV77810.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127060|gb|AAX64763.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364238|gb|ABX68006.1| hypothetical protein SPAB_02628 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404614|gb|ACF64836.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194456849|gb|EDX45688.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197094447|emb|CAR59963.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197240483|gb|EDY23103.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199603544|gb|EDZ02090.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205271896|emb|CAR36737.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205347698|gb|EDZ34329.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708100|emb|CAR32392.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224467202|gb|ACN45032.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320085138|emb|CBY94925.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322713895|gb|EFZ05466.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|326622581|gb|EGE28926.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627157|gb|EGE33500.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 400

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|204930006|ref|ZP_03221027.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204321000|gb|EDZ06201.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
          Length = 400

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKPEVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|89076565|ref|ZP_01162873.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium sp.
           SKA34]
 gi|89047757|gb|EAR53356.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium sp.
           SKA34]
          Length = 391

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/351 (27%), Positives = 154/351 (43%), Gaps = 17/351 (4%)

Query: 1   MRQFLVIIAM----------AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++   + ++                   +  A T     Y L+D NTG V+ E   +  
Sbjct: 1   MKKTSPLFSLVGVTALCTVSFSSLAAPSVIPDAPTLSAKGYVLMDYNTGQVLVEKNANEK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNA 107
            NPASLTKLMT+YV    +K+        + IS+NA        S    + GS + L + 
Sbjct: 61  LNPASLTKLMTSYVAGQEIKQGNISKDDIVVISRNAWARNFPDSSKMFIEVGSEVPLMDL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            + LI++S ND +VA+AE +  +E+ FV  MN+ +K LG+++THF N HG+     YTT 
Sbjct: 121 FRGLIIQSGNDASVALAEHVAGSEQAFVGLMNSWAKKLGMNSTHFANPHGLDHSDLYTTP 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGF 226
            D+A+L   +  D P     +  K          N N       +  DGMKTG+T  +G+
Sbjct: 181 YDIALLGQALIRDLPSIYPLYSEKSFTYNNITQRNRNGLLYDKSMNVDGMKTGYTSGAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           ++ +SA +GD  LIAV++G     TR   S +LL+ GF             K   ++   
Sbjct: 241 SLTSSATEGDMRLIAVVMGTKSTKTRESESKALLNYGFRFFETVVPHKAGDKILSERVWF 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLKNKIT 334
               N+   V ++    ++ N   K     E          K  ++   + 
Sbjct: 301 GNKENVELGVDSSSYVTLSRNDTKKLTASVELNGELDAPITKGDVVGKVLY 351


>gi|312127393|ref|YP_003992267.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777412|gb|ADQ06898.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 386

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 139/313 (44%), Gaps = 6/313 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D +TG ++ E        PAS+TK+MT  ++   +++ +  L+  +  S+
Sbjct: 38  EISAKSAILVDFDTGKILYEKNSHEKLPPASITKIMTMILICEAIEKGRIKLSDRVIASQ 97

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NAS    S    K+   MT++  LK + + SAND  VA+AE +  + ++FV  MN  +K 
Sbjct: 98  NASSLGGSQIYLKENEEMTVEELLKSIAIASANDACVALAEHIAGSVQEFVYMMNKKAKE 157

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNT 203
           LG+  T+F+N +G+    HYT+A D+AI+S  +      +      +  +        NT
Sbjct: 158 LGMLDTNFVNPYGLDAENHYTSAYDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNT 217

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  V  + G  G+KTG T  + F + ASA++    LIAVI+GA D  TR   +  LL  G
Sbjct: 218 NKLVRFYRGCTGVKTGSTDKAKFCVSASALRNGLHLIAVIMGAPDSKTRFNEATKLLDWG 277

Query: 264 FYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           F N +     +                     +S +V    K+      + K    ++  
Sbjct: 278 FANFSMYSPYSKGYCFGKVKVKNGIEKEVEAILSTDVKLLVKKGDESTVESKVTLPQQ-I 336

Query: 320 FIDFEKITLLKNK 332
               +    +   
Sbjct: 337 SAPVKTGQKIGKL 349


>gi|222529548|ref|YP_002573430.1| serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456395|gb|ACM60657.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 386

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 87/350 (24%), Positives = 148/350 (42%), Gaps = 19/350 (5%)

Query: 1   MRQFLVIIAMAMLSN-------------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYP 47
           MR+ + I  +  L                    + +         L+D +TG ++ E   
Sbjct: 1   MRKAITISILIFLLFGNSHIGCKKVFGESLQTQTPSLEISAKSAILVDFDTGKILYEKNS 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                PAS+TK+MT  ++   +++ K  L+  +  S+NAS    S    K+   MT++  
Sbjct: 61  HEKLPPASITKIMTMILICEAIEKGKIKLSDKVVASQNASSLGGSQVYLKENEEMTVEEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + SAND  VA+AE +  + ++FV  MN  +K LG+  T+F+N +G+    HYT+A
Sbjct: 121 LKSIAIASANDACVALAEHIAGSVQEFVYMMNKKAKELGMFDTNFVNPYGLDAENHYTSA 180

Query: 168 RDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            D+AI+S  +      +      +  +        NTN  V  + G  G+KTG T  + F
Sbjct: 181 YDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNTNKLVRFYRGCTGVKTGSTDKAKF 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQ 282
            + ASA++    LIAVI+GA D  TR   +  +L  GF N +     +            
Sbjct: 241 CVSASALRNGLHLIAVIMGAPDSKTRFNDATKVLDWGFANFSMYSPYSKGYCFGKVKVKN 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                    +S +V    K+      + K    ++      +    +   
Sbjct: 301 GIEKEVEAILSTDVKLIVKKGDESTVESKVTLPQQ-ISAPVKTGQKIGKL 349


>gi|56460065|ref|YP_155346.1| D-alanyl-D-alanine carboxypeptidase [Idiomarina loihiensis L2TR]
 gi|56179075|gb|AAV81797.1| D-alanyl-D-alanine carboxypeptidase [Idiomarina loihiensis L2TR]
          Length = 385

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 150/349 (42%), Gaps = 15/349 (4%)

Query: 1   MRQF------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++       + ++  +        +  A +     Y L+D  TG V+AEN       PA
Sbjct: 1   MKKICHLFTAVTLLFSSASFAAQSLVPDAPSVNAKAYILIDHTTGKVLAENNSRESLPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLL 111
           SLTK+MT+Y++   +   +      +T+S+NA        S    + G  +++    + +
Sbjct: 61  SLTKMMTSYIIGKEMLAGRISEKDIVTVSENAWAKNFPESSKMFIEVGKEVSVKELNRGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           I+ S ND  VA+AE +  +E  F   MNN ++ +G+  +HF N+HG+     Y +ARDMA
Sbjct: 121 IISSGNDACVAMAEHIAGSEDAFAGLMNNYAEQIGMKDSHFANSHGLPDSEQYVSARDMA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
            L+  +  + P     +  K       K  N N       L  DG+KTG T  +G+++V+
Sbjct: 181 TLASALINETPDEYKLYSEKSFTYNNIKQYNRNSLLWDRSLNVDGIKTGHTNEAGYSLVS 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLS 286
           SA++    LIAV++G      R   S  LL+ GF      K  +       +  +  +L 
Sbjct: 241 SAVEDGTRLIAVVMGTNSEQARKVESKKLLNYGFRYFETVKAYSAGESFISQRIWGGDLD 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                ISE+V  T  +      +     D E       K   +     +
Sbjct: 301 EVELGISEDVVITLPKGQRDKLKANFELD-EQLQAPLSKGQHVGTVYLQ 348


>gi|295694696|ref|YP_003587934.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus tusciae DSM
           2912]
 gi|295410298|gb|ADG04790.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus tusciae DSM
           2912]
          Length = 405

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 148/325 (45%), Gaps = 7/325 (2%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                         P   L+D  TG ++ E   D    PAS+TK+MT Y+ F  + + KA
Sbjct: 33  AAGVAWPAPPHLTAPSAVLMDAATGQILYEKGADDKRYPASMTKMMTLYLTFEAIHDGKA 92

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   + IS+NA     S          TL + +  + V SAND AVAIAE +  +  +F
Sbjct: 93  HLDDIVPISQNAYNTGGSEVYLDPREKFTLKDMITFVAVHSANDAAVAIAEYVGGSVGQF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V+ MN  ++ LGL+ THF+N  G+    HYTTA DMAIL+  + T +P+ + Y +I  + 
Sbjct: 153 VKRMNEKAQELGLTQTHFVNPDGLHDPNHYTTAMDMAILARDLITKYPEVLDYTKIHDMW 212

Query: 195 IKGKKYPN--TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
           I+   +    TN  +G + G DG+KTGFT  +G+ + A+A QG   LI+VI+   D  +R
Sbjct: 213 IRNHTFNVSATNNLLGKYPGMDGLKTGFTDQAGYCLTATAQQGGVRLISVIMKDPDDQSR 272

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIK-----DFYQQNLSNEVPNISEEVCTTQKEIINYN 307
            K + +LL  GF N T    +          +     + +        +     E    +
Sbjct: 273 QKDTTALLDYGFKNFTPLSLLKPGDPLDVKAEVPDGVIESLPVTTQVPLAPLVPEGTKAD 332

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
             ++  +          +   +   
Sbjct: 333 DLVRTVQWTPGLKAPVAQGQQVGTV 357


>gi|325982907|ref|YP_004295309.1| beta-lactamase [Nitrosomonas sp. AL212]
 gi|325532426|gb|ADZ27147.1| Beta-lactamase [Nitrosomonas sp. AL212]
          Length = 373

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 156/342 (45%), Gaps = 6/342 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+   V++   +  +               + L D  TG V+A         PASLTKLM
Sbjct: 1   MKLLFVLLLTCLTVSSASAQQQEIPVAAKAFMLSDYQTGQVLAGQNVHERIEPASLTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYVVFS LK+ +  L     +S++A     S    +    +T+D  ++ +IV+S ND  
Sbjct: 61  TAYVVFSALKQGQLALNQTAVVSESAWRMIGSRMFIEPNKQVTVDELIRGMIVQSGNDAC 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE++  +E  FV  MN  +K LG+  THF N  G+   GHYTTA D+ +L+  I  D
Sbjct: 121 IALAETVAGSEANFVIIMNKEAKRLGMQNTHFTNTTGLPDPGHYTTAHDLTLLATAIIRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP +   + +K         PN N  +      DGMKTG+T A+G+ ++ SAI+  + LI
Sbjct: 181 FPDFYPLYSLKEYTYNNITQPNRNRLLWIDPHVDGMKTGWTKAAGYCLITSAIRDKRRLI 240

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
           +VI+GA   N R+  S  LL+ GF                    ++   +        +V
Sbjct: 241 SVIIGAKSANARSIESQRLLNYGFQFYDTLHLYKKNDSLATIHLWKGTQNELKAGFDRDV 300

Query: 297 --CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                + +       M+  +   +     +++  +K  +  K
Sbjct: 301 FFTLPKGQADKLKATMEYKQPLIAPIQLGQEVGTVKFTLDDK 342


>gi|312877868|ref|ZP_07737815.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795372|gb|EFR11754.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 386

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 85/350 (24%), Positives = 151/350 (43%), Gaps = 19/350 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-------------IAETNKLPYYTLLDTNTGHVIAENYP 47
           MR+ +  + + ++      ++              +         L+D +TG ++ E   
Sbjct: 1   MRKAITFLIVFLMLFGNSHIACKKVFGESLQTQTPSLEISAKSAILVDFDTGRILYEKNS 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
               +PAS+TK+MT  ++   +++ +  L+  +  S+NAS    S    K+   MT++  
Sbjct: 61  HEKLSPASITKIMTMILICEAIEKGRIKLSDRVVASQNASSLGGSQVYLKENEEMTVEEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + SAND  VA+AE +  + ++FV  MN  +K LG+  T+F+N +G+    HYT+A
Sbjct: 121 LKSIAIASANDACVALAEHIAGSVQEFVYMMNKKAKELGMLDTNFVNPYGLDAENHYTSA 180

Query: 168 RDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            D+AI+S  +      +      +  +        NTN  V  + G  G+KTG T  + F
Sbjct: 181 YDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNTNKLVRFYRGCTGVKTGSTDKAKF 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQ 282
            + ASA++    LIAVI+GA D  TR   +  LL  GF N +     +            
Sbjct: 241 CVSASALRNGLHLIAVIMGAPDSKTRFNEATKLLDWGFANFSMYSPYSKGYCFGKVKIKN 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                    +  +V    K+      + K A  ++      +    +   
Sbjct: 301 GIEKEVEAILCTDVKLLVKKGDESAVESKVALPQQ-ISAPVKAGQKIGKL 349


>gi|119504244|ref|ZP_01626324.1| D-alanyl-D-alanine carboxypeptidase [marine gamma proteobacterium
           HTCC2080]
 gi|119459752|gb|EAW40847.1| D-alanyl-D-alanine carboxypeptidase [marine gamma proteobacterium
           HTCC2080]
          Length = 386

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 86/331 (25%), Positives = 142/331 (42%), Gaps = 11/331 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           +  +     +          Y L+D  TG V+ E+  D    PASLTKLMT+Y++   + 
Sbjct: 15  SASATAVTLVPAPPGINADAYLLMDFATGEVLVEHNIDTRLPPASLTKLMTSYILAEEVD 74

Query: 71  EKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
             +  L   +T+S+NA    P          + G ++T+    + + + S ND  VAIAE
Sbjct: 75  AGRLSLDDEVTVSRNAWSQNPKFRGSSLMWIEPGKSVTVGELEQGIAISSGNDATVAIAE 134

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +E+ FV  MN  ++ L L+ATHF N HG+    H TTARD+  L+     D P   
Sbjct: 135 HIAGSEEAFVALMNRYAEELALTATHFENTHGLPNSDHLTTARDLGSLAIATIRDHPDRY 194

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             ++ +          N N  +      DG+KTG+T  +G+ +VASA +    LI+V+LG
Sbjct: 195 RVYRQQSYTYNDITQYNRNHLLREDPSVDGLKTGYTSVAGYGLVASAEREGMRLISVVLG 254

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           +    +R   + SLL+ GF    + + +    +      ++ N       + E V     
Sbjct: 255 SNSTRSRKAETRSLLNYGFRFYQNLEVVTGATSLGRTRVWKGNAEAIDGGLLESVTVIVP 314

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                   +    D         K  ++   
Sbjct: 315 RTQAAAEVIATFDD--PLQAPINKGDVVGQL 343


>gi|16764225|ref|NP_459840.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|167992114|ref|ZP_02573212.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|16419371|gb|AAL19799.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|205329616|gb|EDZ16380.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261246119|emb|CBG23922.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992623|gb|ACY87508.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157447|emb|CBW16936.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6
           precursor) [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911888|dbj|BAJ35862.1| D-alanyl-D-alanine carboxypeptidase DacC [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321226445|gb|EFX51496.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323129170|gb|ADX16600.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332987795|gb|AEF06778.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 400

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKHEVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|206576649|ref|YP_002239512.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           342]
 gi|290510585|ref|ZP_06549955.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella sp. 1_1_55]
 gi|206565707|gb|ACI07483.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           342]
 gi|289777301|gb|EFD85299.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella sp. 1_1_55]
          Length = 400

 Score =  215 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  +A        L  A +     + L+D  +G V++E   D   +PASLTK+MT+YVV
Sbjct: 17  LLFLVAPAVQAAEQLPDAPSIDARAWILMDYASGKVLSEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K  LT  +T+ ++A           S    K G  +++++  K +I++S ND 
Sbjct: 77  GQAIKAGKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGMQVSVEDLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++AIA+ +  ++  FV  MN  +K +GL+ T FM  HG+   G ++TARDMA+L+  +  
Sbjct: 137 SIAIADYVAGSQDAFVSLMNGYAKKMGLTNTTFMTVHGLDAPGQFSTARDMALLTKAMIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L ADG+KTG T  +G+N+V+SA QGD  
Sbjct: 197 DVPEEYAVHKEKEFTFNKIRQPNRNRLLWSTNLNADGVKTGTTAGAGYNLVSSATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LIAV+LG      R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LIAVVLGTKTDRIRFNESEKLLTWGFRFYETVTPIKPDATFVTQRVWFGDSSEAKLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T  +    N +     ++       EK  ++   
Sbjct: 317 AGSITLPKGQLKNLKASYTLNQPQLTAPLEKGQVVGTI 354


>gi|332799334|ref|YP_004460833.1| Serine-type D-Ala-D-Ala carboxypeptidase [Tepidanaerobacter sp.
           Re1]
 gi|332697069|gb|AEE91526.1| Serine-type D-Ala-D-Ala carboxypeptidase [Tepidanaerobacter sp.
           Re1]
          Length = 388

 Score =  215 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 162/349 (46%), Gaps = 15/349 (4%)

Query: 2   RQF--LVIIAMAMLSNIFPFLSIAE--TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++   +++I + ML  I   ++ A     K P   L+D  TG ++ E        PAS+T
Sbjct: 6   KKISCILLITLLMLFIIISPVAAAPQLDIKSPSAILMDAGTGTILFEKNSHEKMEPASIT 65

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  + F  L+  K  L+  + IS+ A     S      G   TL+  LK +++ SAN
Sbjct: 66  KIMTMIIAFEALESGKVSLSDIVRISERAWGTGGSQVFLAPGEEQTLETLLKCIVIASAN 125

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D ++A+AE +  + + FV+ MN+ +K LG+S T+F+N HG+    HYTTA D+A++S  +
Sbjct: 126 DASMAVAEHIGGSVEGFVKLMNDKAKQLGMSNTNFVNPHGLSSPEHYTTAHDIALMSREL 185

Query: 178 KTDF------PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                       ++ Y +    +       NTN  +G + G DG+KTGF   +G     +
Sbjct: 186 VKYPLFFNWSTIWIDYLEHTDKKRDATMLANTNKLLGKYEGLDGLKTGFHNKAGHCFAGT 245

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSN 287
           A +GD  LI+V+L A   + R + +  LL  GF +    K +       I    + +L N
Sbjct: 246 ARRGDFRLISVVLNADTSSQRFEDTVKLLDYGFGHFDSIKVVEKGSIQKILPVEKGHLEN 305

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               + E+V    ++        K     +      +K   +   + ++
Sbjct: 306 VNVIVPEDVSLLIEKGKEGEINTKV-DVPDKLCAPLKKDHAVGTLLIEQ 353


>gi|254478674|ref|ZP_05092045.1| D-alanyl-D-alanine carboxypeptidase family [Carboxydibrachium
           pacificum DSM 12653]
 gi|214035361|gb|EEB76064.1| D-alanyl-D-alanine carboxypeptidase family [Carboxydibrachium
           pacificum DSM 12653]
          Length = 377

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 94/336 (27%), Positives = 148/336 (44%), Gaps = 4/336 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +  + + ++         +     K     L++  TG ++ E     P  PAS+TK+M
Sbjct: 1   MSKKFLALLISTFLLFNTAYADVMNLKAKSAILMEAETGEILYEKDIHKPLPPASVTKVM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + SAND +
Sbjct: 61  TLLLAIEAIDSGKIKVTDKVVTSKHAFDMGGTQIYLEVGEEMTVDDLMKAIAMNSANDAS 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  TE+ FV+ MN  +K LG   T F NA G+ + GH TT  D+A++S  +   
Sbjct: 121 VALAEYIAGTEENFVEMMNKRAKELGAKNTTFKNATGLPEEGHLTTVYDIAMISRELVKH 180

Query: 181 FPQY-MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
              +     +I  L        NTN  +  + G DG+KTG T  + + + A+A +GD  L
Sbjct: 181 PSIFKYLTNKIDSLRNGKFSLINTNKLLWRYQGVDGIKTGSTSEALYCMAATAKRGDTRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEV 296
           IAV+ GA D  TR   +A LL  GF N    K  +      K    +     V  IS + 
Sbjct: 241 IAVVFGAPDSETRFNETAKLLDYGFANFETVKVASKGEVLGKIKVLKGNKEMVEGISLKD 300

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +        KE + K        K   L   
Sbjct: 301 EYVVVKKGEGKNIKKEVELKNFLTAPVSKNNPLGVL 336


>gi|312110348|ref|YP_003988664.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y4.1MC1]
 gi|311215449|gb|ADP74053.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y4.1MC1]
          Length = 393

 Score =  215 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 88/357 (24%), Positives = 152/357 (42%), Gaps = 21/357 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-------------IAETNKLPYYTLLDTNTGHVIAENYP 47
           M++ L+ + +     +F   S             I   ++     L++ +TG V+ E   
Sbjct: 1   MKKLLIRLLLFASIFLFTISSYVHAEEKKSTARGIELASEARSAILIERDTGAVLYEKNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +    PAS+TK+MT  ++   + + +      +  S+ A+    S    + G  MT+D  
Sbjct: 61  NEKLPPASMTKIMTMLLIMEAIDKGELSYKEKVRASEYAASMGGSQIFLEPGEEMTVDEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L+ + + S ND +VA+AE +  +E+ FV+ MN  +K LGL  T F NA G+   GHY++A
Sbjct: 121 LRGIAIGSGNDASVALAERIAGSEEAFVEMMNKKAKELGLKNTSFQNATGLPAKGHYSSA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            DMAI++  +        +  +     +    K     NTN  V  + G DG+KTGFT  
Sbjct: 181 HDMAIMARELLKYEDITKYTSKYEDYLRENTDKKFWLVNTNRLVKFYPGVDGLKTGFTSE 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----D 279
           + + + A+A +    +IAV+ GA     RN     +L   F        +         +
Sbjct: 241 AKYCLTATAKKNGMRVIAVVFGAPTPKERNAQITRMLDYAFSQYKTHPVLKRNEVVAHAN 300

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +          SE +    K+  + N   K  K  ++     +K   L   I K+
Sbjct: 301 VSKGKKKTVALVTSEPISVLTKKGQSVNKMEKVIKVNKNAKAPIKKGDELGVLILKQ 357


>gi|157146509|ref|YP_001453828.1| D-alanyl-D-alanine carboxypeptidase fraction C [Citrobacter koseri
           ATCC BAA-895]
 gi|157083714|gb|ABV13392.1| hypothetical protein CKO_02270 [Citrobacter koseri ATCC BAA-895]
          Length = 413

 Score =  215 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++   A         +   +     + L+D ++G V+AE   D   +PASLTK+MT+YVV
Sbjct: 30  LLFLFAPTLQAAEQTTAPPSVDARAWILMDYSSGKVLAEGNADEKLDPASLTKIMTSYVV 89

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 90  GQALKAGKIQLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVSDLNKGVIIQSGNDA 149

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 150 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 209

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 210 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 269

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LG      R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 270 LISVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 329

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 330 AGSVTIPRGQLKNLKASFTLTEPQLTAPLKKGQVVGTI 367


>gi|329905874|ref|ZP_08274257.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547445|gb|EGF32266.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 403

 Score =  215 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 103/355 (29%), Positives = 171/355 (48%), Gaps = 19/355 (5%)

Query: 1   MRQFLVIIAMAMLSN-------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+ F+  +A  ++S               A       + LLDT +G V+A   P     P
Sbjct: 18  MKIFIAALAATVISLSSVFVQPASAQTMPAPIVAAKSWLLLDTTSGQVLASQDPTMRIEP 77

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLL 111
           ASLTK+MTAYV F  +KEK+  L   + +S  A +  P  S       + +++D+ L  L
Sbjct: 78  ASLTKIMTAYVTFQAIKEKRLDLAQMVNVSVRAWKVDPSSSKMFIDPATPVSVDDLLHGL 137

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +V+S ND AVA+AE++  TE+ FV  MN  +K +GL+ T F N HG+    +Y+TA+D++
Sbjct: 138 MVQSGNDAAVALAEAVAGTEEAFVVLMNREAKRMGLTNTQFGNPHGLPSQSNYSTAQDLS 197

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L+  + TD+P++     +K         PN N  +      DGMKTG T A+G+ I+AS
Sbjct: 198 KLAAAVITDYPEFYKIDSVKSFTYNKITQPNRNRLLWLDPSVDGMKTGHTEAAGYCIIAS 257

Query: 232 AIQ----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQ 283
           A +    G++ LI+V+LGA    +R + S  LL+ GF N    K             ++ 
Sbjct: 258 AKRPNGSGERRLISVVLGANSDQSRTQESQKLLNWGFQNFDTVKLYGKGQPVETPPVWKG 317

Query: 284 NLSNEVPNISEEVCTTQKEII--NYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +        ++++  T  + +       ++      +      K+ ++K  +  K
Sbjct: 318 SEKTIKIGFTQDIYVTVAKGVAAKMKPVLERKDPLVAPIAANSKVGMMKMMVDGK 372


>gi|237730821|ref|ZP_04561302.1| D-alanyl-D-alanine carboxypeptidase fraction C [Citrobacter sp.
           30_2]
 gi|226906360|gb|EEH92278.1| D-alanyl-D-alanine carboxypeptidase fraction C [Citrobacter sp.
           30_2]
          Length = 407

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++I +A         +   +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  LLILLAPTVQAAEQPTAPPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  L   +T+ K+A                K G  + + +  K +I++S ND 
Sbjct: 84  GQALKAGKINLNDMVTVGKDAWATGNPALRGSSVMFLKPGDQVAVSDLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAAGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSTNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 GGSVTIPRGQLKNLKASFTLTEPQLTAPLKKGQVVGTI 361


>gi|288936359|ref|YP_003440418.1| beta-lactamase [Klebsiella variicola At-22]
 gi|288891068|gb|ADC59386.1| Beta-lactamase [Klebsiella variicola At-22]
          Length = 403

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 158/338 (46%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  +A        L  A +     + L+D  +G V++E   D   +PASLTK+MT+YVV
Sbjct: 20  LLFLIAPAVQAAEQLPDAPSIDARAWILMDYASGKVLSEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K  LT  +T+ ++A           S    K G  +++++  K +I++S ND 
Sbjct: 80  GQAIKAGKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGMQVSVEDLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++AIA+ +   +  FV  MN  +K +GL+ T FM  HG+   G ++TARDMA+L+  +  
Sbjct: 140 SIAIADYVAGNQDAFVSLMNGYAKKMGLTNTTFMTVHGLDAPGQFSTARDMALLTKAMIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L ADG+KTG T  +G+N+V+SA QGD  
Sbjct: 200 DVPEEYAVHKEKEFTFNKIRQPNRNRLLWSTNLNADGVKTGTTAGAGYNLVSSATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LIAV+LG      R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LIAVVLGTKTDRIRFNESEKLLTWGFRFYETVTPIKPDATFVTQRVWFGDSSEAKLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T  +    N +     ++       EK  ++   
Sbjct: 320 AGSITLPKGQLKNLKASYTLNQPQLTAPLEKGQVVGTI 357


>gi|146296751|ref|YP_001180522.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410327|gb|ABP67331.1| D-Ala-D-Ala carboxypeptidase DacF, Serine peptidase, MEROPS family
           S11 [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 384

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 17/346 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ L ++ ++   +   F+           + +         L+D +TG V+ E     
Sbjct: 1   MKRILTLLILSFFLSSLNFIRAFCQTQNNELTNSPELSAMSAILVDFDTGRVLFEKNSHE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS+TK+MT  ++   +++ K  L+  +  S+NA+    S    K+   MT++  LK
Sbjct: 61  KLPPASITKIMTMILICEAIEKGKLKLSDKVIASQNAASLGGSQVYLKENEEMTVEELLK 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            + + SAND  VA+AE L  + + FV  MN  +K LG+  T+F+N +G+   GHYT+A D
Sbjct: 121 SIAIASANDACVALAEHLAGSVQGFVYMMNQKAKELGMLDTNFVNPYGLDAEGHYTSAYD 180

Query: 170 MAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +A++S  +      +      +  +        NTN  V  + G  G+KTG T  + F I
Sbjct: 181 VAVMSRELLKHKLVRNYLTTWVDTVRDGKFGLTNTNKLVRFYRGCTGVKTGSTDKAKFCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQN 284
            ASA +    LIAVI+ A D  TR   +  LL  GF N                      
Sbjct: 241 SASAQRNALHLIAVIMAAPDSKTRFNEAVRLLDWGFANFAMYAPYAKDFSFGKVRVRNGL 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                  +  +V    K+    + + K    KE      +   ++ 
Sbjct: 301 KKEVSAVLERDVKLLVKKGDENSIETKTILPKE-IPAPVKLGQVVG 345


>gi|192360123|ref|YP_001981301.1| D-alanyl-D-alanine carboxypeptidase family [Cellvibrio japonicus
           Ueda107]
 gi|190686288|gb|ACE83966.1| D-alanyl-D-alanine carboxypeptidase family [Cellvibrio japonicus
           Ueda107]
          Length = 405

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 5/321 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +  A       Y L+D  TG +IAE   +    PASLTK+M++Y++   L++ +    T
Sbjct: 47  AIPQAPQLAATGYILVDATTGSIIAEFNAEQKLPPASLTKMMSSYLIVDELEKGRYQEQT 106

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + IS  A +   S    K+G+ + L + L+ +I++S ND  VA+AE     E  FV  M
Sbjct: 107 LVPISVKAWQMGGSRMFVKEGTQVPLIDLLRGVIIQSGNDATVALAEYHSGNEDAFVDRM 166

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +  LG+  THF N+ G    GH TTA+D+AIL+  I  D P Y      K       
Sbjct: 167 NQKAAELGMVNTHFENSSGWPAEGHLTTAKDLAILARAIINDHPIYYPLHAEKYFVYNDI 226

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  N N  +      DG+KTG T  +G+ +VAS+ + +  LIAV++G  +   R   +  
Sbjct: 227 RQRNRNELLFRDETVDGLKTGHTEEAGYCLVASSKRENTRLIAVVMGTANEKARAAETQK 286

Query: 259 LLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           LL+ GF             +      +          ++  +  T  +      Q K   
Sbjct: 287 LLAYGFRYFQTTTLYQAGQELSKQRVWAGKTDEVTLGLANAITLTLPKGREQGLQAKMHV 346

Query: 315 DKESHFIDFEKITLLKNKITK 335
           + E+     +    L N   +
Sbjct: 347 N-ETIKAPLQVGQELGNLTIE 366


>gi|20807763|ref|NP_622934.1| D-alanyl-D-alanine carboxypeptidase [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516318|gb|AAM24538.1| D-alanyl-D-alanine carboxypeptidase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 377

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/336 (27%), Positives = 148/336 (44%), Gaps = 4/336 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +  + + ++         +     K     L++  TG ++ E     P  PAS+TK+M
Sbjct: 1   MSKKFLALLISTFLLFNTAYADVMNLKAKSAILMEAETGEILYEKDIHKPLPPASVTKVM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + SAND +
Sbjct: 61  TLLLAIEAIDSGKIKVTDKVVTSKHAFDMGGTQIYLEVGEEMTVDDLMKAIAMNSANDAS 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  TE+ FV+ MN  +K LG   T F NA G+ + GH TT  D+A++S  +   
Sbjct: 121 VALAEYIAGTEENFVEMMNKRAKELGAKNTTFKNATGLPEEGHLTTVYDIAMISRELVKH 180

Query: 181 FPQY-MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
              +     +I  L        NTN  +  + G DG+KTG T  + + + A+A +GD  L
Sbjct: 181 PSIFKYLTNKIDSLRNGKFSLINTNKLLWRYKGVDGIKTGSTSEALYCMAATAKRGDTRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEV 296
           IAV+ GA D  TR   +A LL  GF N    K  +      K    +     V  IS + 
Sbjct: 241 IAVVFGAPDSETRFNETAKLLDYGFANFETVKVASKGEVLGKIKVLKGNKEMVEGISLKD 300

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +        KE + K        K   L   
Sbjct: 301 EYVVVKKGEGKNIKKEVELKNFLTAPVSKNNPLGVL 336


>gi|119946648|ref|YP_944328.1| Serine-type D-Ala-D-Ala carboxypeptidase [Psychromonas ingrahamii
           37]
 gi|119865252|gb|ABM04729.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Psychromonas ingrahamii 37]
          Length = 406

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 13/344 (3%)

Query: 1   MRQF-LVIIAMAMLSNIFP---FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++  L++ A+    N+F        A       Y L+D N+G V++EN  D   NPASL
Sbjct: 16  MKKISLLVTALIFSFNLFANPTITPSAPEIGAKGYLLIDFNSGKVLSENNSDVRLNPASL 75

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TK+MT+Y++   +K         +TIS+ A        S    + G  +++ +  + +I+
Sbjct: 76  TKMMTSYIIGQEIKSGNLSPDDKVTISEKAWSKNFPESSKMFIEVGKEVSVADLNRGIII 135

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E  F   MN+ +  LG++ T F N+HG+   GHYTT  DMAIL
Sbjct: 136 QSGNDACVAMAEYIAGSEGAFADLMNSWAAQLGMNNTQFKNSHGLTAEGHYTTPHDMAIL 195

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASA 232
           +  +  D P     +  K  +  G   PN N       L  DG+KTG T  +G+++++SA
Sbjct: 196 AQALINDVPDEYLIYSEKSFKFNGIDQPNRNALLWDKSLDVDGIKTGHTNEAGYSLISSA 255

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP-- 290
            +    LI+V++G    + R   S  LL+ GF         N   +   ++      P  
Sbjct: 256 TKDGMRLISVVMGTRSTSARLTESKKLLNWGFRFFETLTPYNAGDQLANERIWMGSQPMI 315

Query: 291 --NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + ++   T       N       + E      +K  ++   
Sbjct: 316 RLGVKDDTPITLPRGEAKNLTANFIIENE-LRAPIQKGDVVGKV 358


>gi|322616338|gb|EFY13247.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619588|gb|EFY16463.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622716|gb|EFY19561.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628628|gb|EFY25415.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631565|gb|EFY28321.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637092|gb|EFY33795.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641708|gb|EFY38344.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644498|gb|EFY41038.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648431|gb|EFY44883.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654166|gb|EFY50489.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658081|gb|EFY54348.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663555|gb|EFY59757.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670291|gb|EFY66431.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671527|gb|EFY67649.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676883|gb|EFY72950.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682808|gb|EFY78827.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686487|gb|EFY82469.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323196059|gb|EFZ81222.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196794|gb|EFZ81938.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204806|gb|EFZ89801.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208966|gb|EFZ93903.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323209715|gb|EFZ94642.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215197|gb|EFZ99942.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222423|gb|EGA06799.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323229875|gb|EGA13998.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233100|gb|EGA17196.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240835|gb|EGA24877.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243152|gb|EGA27172.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248693|gb|EGA32621.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251695|gb|EGA35562.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257509|gb|EGA41197.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261490|gb|EGA45071.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267921|gb|EGA51400.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272012|gb|EGA55427.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 400

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDM 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I      + +  +  +         
Sbjct: 256 RLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKPEVNLGAG 315

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    T       N +     ++       +K  ++   
Sbjct: 316 DAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|257092335|ref|YP_003165976.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044859|gb|ACV34047.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 378

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/325 (27%), Positives = 154/325 (47%), Gaps = 6/325 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +      L          + L++  +G  +A   PD   +PASLTKLMTAY+ F+ LK+ 
Sbjct: 17  VVASAQQLPTPPALAAKSWLLIEAASGQELAAQAPDQRLDPASLTKLMTAYLSFAALKQG 76

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              +  P+ +S+ A +   S    + G+ + +++ LK +IV+S ND  VA+AE++   E+
Sbjct: 77  TLKVDQPVPVSQKAWKTGGSRMFIQVGTQVKVEDLLKGMIVQSGNDACVALAEAIAGDEE 136

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQIK 191
            F Q MN  ++ LG+  + F N+ G+    HYTTARD+A L+  +  DFP     Y+ +K
Sbjct: 137 NFAQMMNREAQRLGMKGSSFRNSSGLPDPQHYTTARDLATLAGALIRDFPDEYAKYYSLK 196

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                    PN N  +      DG+KTG T A+G+ +V+SA +G + L++V+LGA   + 
Sbjct: 197 EFRYNNITQPNRNRLLWIDPTVDGLKTGHTEAAGYCLVSSAKRGPRRLLSVVLGAPSDSV 256

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + S  LL+ GF      +      +      ++   S+       ++     +     
Sbjct: 257 RAQESLKLLNYGFQFYDAVQVYAKNEEVSTLKVWKGTASSVKLGFVNDLVIAVPKGFGPK 316

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            + +    ++       +  +L   
Sbjct: 317 IRTELV-SQQPLIAPVAQGQVLGTL 340


>gi|119713206|gb|ABL97274.1| D-alanyl-D-alanine carboxypeptidase [uncultured marine bacterium
           EB0_50A10]
          Length = 384

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 5/336 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L+ + +  +     F+  A    L  Y L++ NT  VIAE   D    PAS+TK+M
Sbjct: 1   MKKLLIPLLLTNILYAQSFVPDAPELDLKSYILIEPNTNTVIAEFNSDSEIEPASMTKIM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T+YVV   +      L   + IS+ A     S    + G  +++ + LK +I++S ND +
Sbjct: 61  TSYVVADQIANDLISLDDQVLISEKAWRMEGSKMFIEAGKKVSVSDLLKGIIIQSGNDAS 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE    TE+ FV  MN  +  L ++ T F N+ G+    H+++A+D+A L+      
Sbjct: 121 VAIAEYAGGTERGFVDLMNAYAGALSMNNTIFKNSTGLPDENHFSSAKDLATLTSDFIKK 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP     +  K       K  N N  +     +DG+KTG T A+G+ +V SA +G+  LI
Sbjct: 181 FPDIYSLYNEKQFTFNNIKQLNRNKLLWRDDSSDGVKTGHTEAAGYCLVGSAKRGNMRLI 240

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
            V+ G+   N R   S  LL  GF     +K +N   +    + +     +    + E++
Sbjct: 241 TVVAGSDSDNNRFLASQRLLEYGFRFFATQKVLNANQEYKNINIWGGLEKSLSLGVLEDI 300

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             T       +  +       +     E    +   
Sbjct: 301 SITLPRTSFKDLTINYN-YINNIQAPIEIGQTIGTL 335


>gi|294637039|ref|ZP_06715354.1| D-alanyl-D-alanine carboxypeptidase DacA [Edwardsiella tarda ATCC
           23685]
 gi|291089736|gb|EFE22297.1| D-alanyl-D-alanine carboxypeptidase DacA [Edwardsiella tarda ATCC
           23685]
          Length = 399

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 85/335 (25%), Positives = 139/335 (41%), Gaps = 11/335 (3%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              +   +              Y LLD ++G V+ E   D   +PASLTK+M +YV+   
Sbjct: 19  LTLVALPLLAAEPAPPQINAKAYILLDYDSGRVLTEGNADQRLDPASLTKIMASYVIGQA 78

Query: 69  LKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVA 122
           LK  K      + + K+A                K G  + +    + ++++S ND ++A
Sbjct: 79  LKSGKIAPGDMVVVGKDAWATGNPVLRGSSLMFLKPGDRVPVSELNRGVVIQSGNDASIA 138

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A+ +  ++  FV  MN   ++ GL  THF   HG+   G Y++ARDMA++S  +  D P
Sbjct: 139 LADHVAGSQDAFVNLMNKYVESWGLKNTHFRTVHGLDSAGQYSSARDMALISQHLIADVP 198

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                 + K       +  N N     T L  DG+KTGFT  +G N+VASA  G   LI+
Sbjct: 199 DEYQLNKEKEFTFNNIRQTNRNRLLWDTSLNVDGVKTGFTNGAGHNLVASATDGPMRLIS 258

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVC 297
           V+LGA     R + S  LL+ GF        I        +  +    S     + +   
Sbjct: 259 VVLGAPSDRVRFEESKKLLTWGFRFYETVTPIKIGQPFTTQKVWYGERSEVALGVDKSAA 318

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            T       + +      + +     +K  ++   
Sbjct: 319 VTIPRGQMKDLKASYTLTQPTLEAPLKKGQVVGTI 353


>gi|268590223|ref|ZP_06124444.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rettgeri DSM
           1131]
 gi|291314506|gb|EFE54959.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rettgeri DSM
           1131]
          Length = 401

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++     S       +A       + L+D N+G ++A   PD   +PASLTK+MT+YV
Sbjct: 17  LSLLVAVSTSAYAAQTPVAPQVDAKAFVLMDYNSGKILASGNPDERLDPASLTKIMTSYV 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           +   +   K      +T+ ++A                K    +++ +  K ++++S ND
Sbjct: 77  IGQAVNAGKITPQDMVTVGEDAWATGNPVLKGSSLMFLKPKDRVSVLDLNKGIVIQSGND 136

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+A+ +  ++  FV  MN   + +GL  THF   HG+   G Y+TARDMA+L+  + 
Sbjct: 137 ASIALADYVAGSQDSFVSLMNQYVQKIGLKNTHFKTVHGLDSEGQYSTARDMALLTQAMI 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N       L  DG+KTG T  +G N+VASA +GD 
Sbjct: 197 RDVPDEYALHKEKEFTFNKIRQPNRNRLLWNQNLKVDGVKTGHTSGAGHNLVASATEGDM 256

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I        +  +  + S     ++
Sbjct: 257 RLISVVLGAPSDRVRFSESEKLLTWGFRFFETVTPIKADATLKKQRVWFGDTSEVDLGVA 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++V  T  +    N ++      +S      K   +   
Sbjct: 317 DDVSITIPKGQLQNLKVDIQLTNDSLEAPLAKNQAVGTI 355


>gi|228922828|ref|ZP_04086126.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228836883|gb|EEM82226.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 385

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 90/320 (28%), Positives = 147/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MTL+  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTLNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAQKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F   T +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYTTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|225182115|ref|ZP_03735543.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167202|gb|EEG76025.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 382

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 82/343 (23%), Positives = 151/343 (44%), Gaps = 10/343 (2%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++  + I+ + +L         +  ++     L++ ++G  + E   D P  PAS TK+
Sbjct: 1   MKKSIVAILLITLLLTTGSVYGESFDSRADVAVLMEASSGQFLYEKNADTPLPPASTTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS--EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           MT  + F  L+           +S+NA   E   S         +++ + +  + + SAN
Sbjct: 61  MTLLLAFEALERGDIDWDDTTIVSRNAWSAEVVGSRMFLDLDQEVSIRDLIYGISIVSAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+AE L  +E+ FVQ MN  ++ LG++ T F N  G+   GH  +ARD+AILS  +
Sbjct: 121 DGTVALAEHLSGSEEAFVQQMNQRAQELGMTNTVFRNTSGLPADGHVMSARDIAILSREL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGD 236
             + P  +                N N     +F GA+G+KTG+T  S FN+  +A++  
Sbjct: 181 IVNHPGILDIETQPEFTFNDIHQYNWNRRFLSSFEGANGLKTGWTDESRFNLAGAALRDG 240

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN----EVPNI 292
           + LI+V++GA   + R   ++ LL+ GF   + +                         +
Sbjct: 241 RQLISVVMGAESESERVAATSELLNHGFNQFSPQTIAQKGEVVAEVAVKDGRQQVVPVTV 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +EV     +    + ++  A+  E+     E+  +    + +
Sbjct: 301 PQEVEVAVPQGRENDIELVVAE--ETLTAPVEEGAVAGQLLVQ 341


>gi|167037532|ref|YP_001665110.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115947|ref|YP_004186106.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166856366|gb|ABY94774.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929038|gb|ADV79723.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 381

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 159/350 (45%), Gaps = 15/350 (4%)

Query: 2   RQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ L ++   +L+  F       +     K     L++ NTG ++ E     P  PAS+T
Sbjct: 3   KRLLTLLVSVILAISFVLNGTVYADTLNLKSKSAILMEANTGQILYEKDSHKPLPPASVT 62

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + SAN
Sbjct: 63  KVMTLLLAIEAIDSGKIKITDKVVTSKHAFDMGGTQIYLEVGEEMTVDDLMKAIAMNSAN 122

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  TE+ FV+ MN  +K LG   T F NA G+ + GH T+  D+A++S  +
Sbjct: 123 DASVALAEYIAGTEENFVEMMNKRAKELGAKNTTFKNATGLPEEGHLTSVYDIAMISREL 182

Query: 178 K-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              +        ++  L        NTN  +  + G DG+KTG T  + + + A+A +GD
Sbjct: 183 VKHESIFKYLTNKLDSLRNGKFSLINTNKLLWRYKGVDGIKTGSTSEALYCMAATAKRGD 242

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNI- 292
             LIAV+ GA D  TR   +A LL  GF N    K  +           +     V  + 
Sbjct: 243 TRLIAVVFGAPDSETRFSEAAKLLDYGFANYESVKVASKGQSFGNVKVLKGKREAVSVVC 302

Query: 293 --SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN----KITKK 336
              E +   + E  N  T+++      +       I  +K     K+ KK
Sbjct: 303 RDDEYILIKKGEGKNIKTEVELKNAVLAPLAKEVPIGTVKITQDGKVIKK 352


>gi|16128807|ref|NP_415360.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89107690|ref|AP_001470.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli str. K-12
           substr. W3110]
 gi|157160319|ref|YP_001457637.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           HS]
 gi|170020804|ref|YP_001725758.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           ATCC 8739]
 gi|170080498|ref|YP_001729818.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188494572|ref|ZP_03001842.1| penicillin-binding protein 6 [Escherichia coli 53638]
 gi|238900098|ref|YP_002925894.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli BW2952]
 gi|253774159|ref|YP_003036990.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160916|ref|YP_003044024.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli B
           str. REL606]
 gi|256023565|ref|ZP_05437430.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia sp.
           4_1_40B]
 gi|297518732|ref|ZP_06937118.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           OP50]
 gi|312970918|ref|ZP_07785097.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1827-70]
 gi|2506804|sp|P08506|DACC_ECOLI RecName: Full=D-alanyl-D-alanine carboxypeptidase dacC;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 6; Short=PBP-6; Flags:
           Precursor
 gi|1651381|dbj|BAA35542.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli str. K12
           substr. W3110]
 gi|1787062|gb|AAC73926.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli str. K-12 substr. MG1655]
 gi|157065999|gb|ABV05254.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli HS]
 gi|169755732|gb|ACA78431.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli ATCC
           8739]
 gi|169888333|gb|ACB02040.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|188489771|gb|EDU64874.1| penicillin-binding protein 6 [Escherichia coli 53638]
 gi|238860730|gb|ACR62728.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli BW2952]
 gi|242376630|emb|CAQ31340.1| penicillin-binding protein 6 [Escherichia coli BL21(DE3)]
 gi|253325203|gb|ACT29805.1| Beta-lactamase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972817|gb|ACT38488.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli B str. REL606]
 gi|253977037|gb|ACT42707.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli BL21(DE3)]
 gi|309701117|emb|CBJ00415.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Escherichia coli ETEC H10407]
 gi|310336679|gb|EFQ01846.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1827-70]
 gi|315619844|gb|EFV00363.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 3431]
 gi|332342172|gb|AEE55506.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli UMNK88]
          Length = 400

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|295399047|ref|ZP_06809029.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978513|gb|EFG54109.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 393

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 21/357 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-------------IAETNKLPYYTLLDTNTGHVIAENYP 47
           M++ L+ + +     +F   S             I   N+     L++ +TG V+ E   
Sbjct: 1   MKKQLIRLLLFASVFLFTISSYVHAEEKKSTARGIELANEARSAILIERDTGAVLYEKNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +    PAS+TK+MT  ++   + + +      +  S+ A+    S    + G  MT+D  
Sbjct: 61  NEKLPPASMTKIMTMLLIMEAIDKGELSYKEKVRASEYAASMGGSQIFLEPGEEMTVDEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L+ + + S ND +VA+AE +  +E+ FV+ MN  +K LGL  T F NA G+   GHY++A
Sbjct: 121 LRGIAIGSGNDASVALAERIAGSEEAFVEMMNKKAKELGLKNTSFQNATGLPAKGHYSSA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            DMAI++  +        +  +     +    K     NTN  V  + G DG+KTGFT  
Sbjct: 181 HDMAIMARELLKYEDITKYTSKYEDYLRENTDKKFWLVNTNRLVKFYPGVDGLKTGFTSE 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----D 279
           + + + A+A +    +IAV+ GA     RN     +L   F        +         +
Sbjct: 241 AKYCLTATAKKNGMRVIAVVFGAPTPKERNAQITRMLDYAFSQYKTHPVLKRNEVVAHAN 300

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +          SE +    K+  + N   K  K  ++     +K   L   I K+
Sbjct: 301 VSKGKKKTVALVTSEPISVLTKKGQSVNKIEKVIKVNKNAKAPIKKGDELGVLILKQ 357


>gi|291616858|ref|YP_003519600.1| DacC [Pantoea ananatis LMG 20103]
 gi|291151888|gb|ADD76472.1| DacC [Pantoea ananatis LMG 20103]
 gi|327393284|dbj|BAK10706.1| penicillin-binding protein 6 precursor DacC [Pantoea ananatis
           AJ13355]
          Length = 400

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 148/337 (43%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +A ++        A       + L+D  +G V+ E+  D   +PASLTK+MT+YVV 
Sbjct: 18  LLLVAPMAVFAEQAPAAPQIDAKAWILIDYASGKVLTESNADQRLDPASLTKMMTSYVVG 77

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+ ++A                K G  + +    K ++++S ND  
Sbjct: 78  QAIKSGKIKPDDMVTVGQDAWATGNPKLRGSSLMFLKPGDRIPVHELNKGIVIQSGNDAC 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  F+  MNN  K LGL  THFM  HG+   G Y+TARDMA++   +  D
Sbjct: 138 IALADYVAGSQDSFIGLMNNYVKALGLKNTHFMTVHGLDADGQYSTARDMALIGQALIRD 197

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+     + K       +  N N     + L  DG+KTG T  +G N+VASA +GD  L
Sbjct: 198 VPEEYALNKEKEFTFNNIRQMNRNRLLWSSNLKVDGIKTGHTSGAGNNLVASATEGDMRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE 295
           I+V+LG      R + S  LL+ GF        I        +  +    +     + ++
Sbjct: 258 ISVVLGTASDAIRFRESEKLLTWGFRFFETVTPIKAGAPFAQQRVWFGEHNQVNLGVEKD 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +   +          +K  ++   
Sbjct: 318 AALTIPKGQMKNLKASYSLTSPQLEAPLKKNQVVGTI 354


>gi|242239720|ref|YP_002987901.1| beta-lactamase [Dickeya dadantii Ech703]
 gi|242131777|gb|ACS86079.1| Beta-lactamase [Dickeya dadantii Ech703]
          Length = 401

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 152/337 (45%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            + +   S+     S         + L+D  +G V+AE   D   +PASLTK+MT+YVV 
Sbjct: 19  FLTLFSPSSYAEQPSAPPQIDAKAFILMDATSGRVLAELNADERLDPASLTKIMTSYVVG 78

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+  +A      +         K G  + + +  K ++++S ND +
Sbjct: 79  QAIKAGKIKPDDRVTVGSDAWANGNPSLRGSSLMFLKPGDQILVSDLNKGMVIQSGNDAS 138

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  +++ F+  MN  + +LGLS +HF+  HG+   G Y+TARDM+ L+  +  D
Sbjct: 139 IALADYVAGSQQAFISLMNQYAASLGLSNSHFLTVHGLDTPGQYSTARDMSRLTQALIRD 198

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P        K         PN N       L  DG+KTGFT  +G+N+V+SA++G   L
Sbjct: 199 LPDEYALHSEKAFTFNKINQPNRNRLLWSATLRVDGVKTGFTHGAGYNLVSSAVEGGTRL 258

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE 295
           IAV+LG+     R + S  LL+ GF        +        +  +    +     ++++
Sbjct: 259 IAVVLGSSSDAIRFRESEKLLAWGFRFFETVTVVRTDEPFTTQRVWFGVENRVRLGVTQD 318

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +     +        ++  ++ + 
Sbjct: 319 AAVTVPKGQVKNVKANFTLNARPLQAPLKQGQVVGSL 355


>gi|324112725|gb|EGC06701.1| D-alanyl-D-alanine carboxypeptidase [Escherichia fergusonii B253]
 gi|325496781|gb|EGC94640.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia
           fergusonii ECD227]
          Length = 403

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 153/338 (45%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++   A           A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  LLFLFAPTVQAAEQAIDAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ ++A                K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+LS  +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLSKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DG+KTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLHVDGLKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVSQRVWFGDKSEVKLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +     ++       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 357


>gi|170768996|ref|ZP_02903449.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia albertii
           TW07627]
 gi|170122068|gb|EDS90999.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia albertii
           TW07627]
          Length = 403

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  LLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +TI K+A                K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTIGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 GGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|229086646|ref|ZP_04218815.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-44]
 gi|228696728|gb|EEL49544.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-44]
          Length = 386

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ E  P+    PAS+TK+MT  ++   +++ K  L   +  S+
Sbjct: 31  AEQASSAIVIEQDTGKVLFEKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLEDKVRASE 90

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 91  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 150

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DM+I+                +   ++    K    
Sbjct: 151 LGLKNTHFQNPTGLPAKDHYSTAYDMSIMAKELMKYPLIRKYTGKYEDYLRENTEKKFWL 210

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 211 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 270

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPN----ISEEVCTTQKEIINYNTQMKEAKDK 316
              F   T +K      K    +    +        S+ V    K+  N +   +E   +
Sbjct: 271 DYAFGQYTTKKMYKRGEKIQTVKVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEIITE 330

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 331 KKVKAPIKKGDALGTLVIKK 350


>gi|138895883|ref|YP_001126336.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248772|ref|ZP_03147472.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. G11MC16]
 gi|134267396|gb|ABO67591.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211648|gb|EDY06407.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. G11MC16]
          Length = 391

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 89/320 (27%), Positives = 143/320 (44%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
            ++     L++ +TG V+ E  P     PAS+TK+MT  ++   + E K      +  S+
Sbjct: 36  ADEAKSAILIERDTGKVLYEKNPHEKLPPASMTKIMTMLLIMEAIDEGKLSYDEKVRTSE 95

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G  MT+D  L+ + + SAND +VA+AE +  +E+ FV+ MN  +K 
Sbjct: 96  YAASMGGSQIFLEPGEEMTVDELLRAIAIGSANDASVAMAERIAGSEEAFVEMMNEKAKE 155

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI----KGLEIKGKKY 200
           LGL  T F N  G+   GHY++A DMAI++  +        +  +     +    K    
Sbjct: 156 LGLKETKFANTTGLPAEGHYSSAYDMAIMARELLKYEGITKYTSKYEDYLRENTDKKFWL 215

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  +G+ + A+A +    +IAV+ GA    +RN     +L
Sbjct: 216 VNTNRLVKFYPGVDGLKTGFTSEAGYCLTATAKKNGMRVIAVVFGAPTPKSRNAQITKML 275

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              F++                D  +    +     SE V    K+  +     K  K K
Sbjct: 276 DYAFHHYQAHPVYKRNETVARVDVSKGKQKSVAAVTSEPVSVLTKKGQSVEQIEKVVKVK 335

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +       K   L   I K+
Sbjct: 336 DGVKAPVRKGDELGVLILKQ 355


>gi|124265504|ref|YP_001019508.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylibium
           petroleiphilum PM1]
 gi|124258279|gb|ABM93273.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylibium
           petroleiphilum PM1]
          Length = 384

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 160/347 (46%), Gaps = 17/347 (4%)

Query: 1   MRQFLVIIAMAMLS----NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++  V++     +                    Y L D  T  V+A   PD P  PASL
Sbjct: 1   MKRLFVLLFAVATALTGVAAQAQAVQPPEIAARSYLLFDVTTNQVLAAKDPDSPIEPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLM+AY+VF  LK+KK  LT  + +S+ A        S S     S +T+D+ LK  IV
Sbjct: 61  TKLMSAYLVFQALKDKKLTLTQTLPVSERAWRTGMTGASRSFLPLNSQVTVDDLLKGEIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  V +AE +  + ++FV  MN  ++  GL AT F N  G+   GH +TARD+A++
Sbjct: 121 QSGNDATVVLAEGVGGSLEQFVAMMNRQAQAFGLKATTFKNPEGLPAAGHTSTARDLAVI 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           + R+  DFP+Y+ Y  ++       K PN N  +      DG+KTGFT A+G+ ++ +A 
Sbjct: 181 ATRLVQDFPEYLRYSVMREFTFNKIKQPNRNLLLYRDPTVDGLKTGFTDAAGYCMITTAK 240

Query: 234 QG----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLS 286
           +      + LI+V+LGA    +R   S  LL+ G+      K       ++     +  S
Sbjct: 241 RDFPNGPRRLISVVLGAASMESRANESQKLLNWGYTAFDAVKLFDANQAVVSPPIWKGSS 300

Query: 287 NEVPNISE---EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +     S     V   + +     T +       +     + +  +K
Sbjct: 301 STAKLGSAAAVYVSVPKGDGDKLKTDISRTDPLVAPLAKGQVVGSIK 347


>gi|326391736|ref|ZP_08213259.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325992236|gb|EGD50705.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 381

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 11/346 (3%)

Query: 2   RQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ L ++   +L+  F       +     K     L++ NTG ++ E     P  PAS+T
Sbjct: 3   KRLLTLLVSVILAISFVLNGTVYADTLNLKSKSAILIEANTGQILYEKDSHKPLPPASVT 62

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + SAN
Sbjct: 63  KVMTLLLAIEAIDSGKIKITDKVVTSKHAFDMGGTQIYLEVGEEMTVDDLMKAIAMNSAN 122

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  TE+ FV+ MN  +K LG   T F NA G+ + GH T+  D+A++S  +
Sbjct: 123 DASVALAEYIAGTEENFVEMMNKRAKELGAKNTTFKNATGLPEEGHLTSVYDIAMISREL 182

Query: 178 K-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              +        ++  L        NTN  +  + GADG+KTG T  + + + A+A +GD
Sbjct: 183 VKHESIFKYLTNKLDSLRNGKFSLINTNKLLWRYKGADGIKTGSTSEALYCMAATAKRGD 242

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS--- 293
             LIAV+ GA D  TR   +A LL  GF N    K  +        +    +   +S   
Sbjct: 243 TRLIAVVFGAPDSETRFSEAAKLLDYGFANYESVKVASKGQSFGNVKVFKGKKQAVSVVC 302

Query: 294 ---EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              E +   + E  N  T+++      +       I  +K     K
Sbjct: 303 RDDEYILIKKGEGKNIKTEVELKNAVLAPLAKEVPIGTVKITQDGK 348


>gi|218548358|ref|YP_002382149.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia
           fergusonii ATCC 35469]
 gi|218355899|emb|CAQ88514.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia fergusonii ATCC 35469]
          Length = 400

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 153/338 (45%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++   A           A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  LLFLFAPTVQAAEQAIDAPSVDARAWVLMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ ++A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGRDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+LS  +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLSKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DG+KTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLHVDGLKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVSQRVWFGDKSEVKLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +     ++       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 354


>gi|300929353|ref|ZP_07144826.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           187-1]
 gi|300947071|ref|ZP_07161292.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           116-1]
 gi|300957042|ref|ZP_07169288.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           175-1]
 gi|301646276|ref|ZP_07246167.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           146-1]
 gi|331641359|ref|ZP_08342494.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli H736]
 gi|300316182|gb|EFJ65966.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           175-1]
 gi|300453310|gb|EFK16930.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           116-1]
 gi|300462699|gb|EFK26192.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           187-1]
 gi|301075479|gb|EFK90285.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           146-1]
 gi|323938194|gb|EGB34454.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1520]
 gi|323942711|gb|EGB38876.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E482]
 gi|323962952|gb|EGB58524.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H489]
 gi|331038157|gb|EGI10377.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli H736]
          Length = 407

 Score =  214 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 361


>gi|183598299|ref|ZP_02959792.1| hypothetical protein PROSTU_01686 [Providencia stuartii ATCC 25827]
 gi|188020471|gb|EDU58511.1| hypothetical protein PROSTU_01686 [Providencia stuartii ATCC 25827]
          Length = 401

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 22/353 (6%)

Query: 2   RQFLVI----------IAMAML-SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           ++F  +          + +A+          +A       + L+D ++G ++A   PD  
Sbjct: 3   KKFFTLKARYLGTGLGLLVAVSHFAYAAGTPVAPQVDAKAFVLMDYDSGKILASGNPDER 62

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTL 104
            +PASLTK+MT+YVV   +K  K      +T+  +A                K    +++
Sbjct: 63  LDPASLTKMMTSYVVGQAIKAGKITPQDMVTVGVDAWATGNPVLKGSSLMFLKPKDRVSV 122

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
            +  K ++++S ND ++A+A+ +  ++  FV  MN   K LGL  THF   HG+   G Y
Sbjct: 123 LDLNKGVVIQSGNDASIALADYVAGSQDSFVSLMNEYVKQLGLKNTHFKTVHGLDSEGQY 182

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCA 223
           +TARDMAIL+  +  D P      + K       + PN N       L  DG+KTG T  
Sbjct: 183 STARDMAILAQAMIRDVPDEYALHKEKEFTFNKIRQPNRNRLLWSQNLNVDGVKTGHTSG 242

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKD 279
           +G N+VASA  G   LI+V+LGA     R   S  LL+ GF        I        + 
Sbjct: 243 AGHNLVASATDGPMRLISVVLGAPSDRVRFSESEKLLTWGFRFFETVTPIKADQTLQTQR 302

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  + S     + ++   T  +    N ++       S      K   +   
Sbjct: 303 VWFGDKSEVALGVEKDTAITIPKGQLQNLKVSYTLTNPSIEAPLAKNQAVGTV 355


>gi|304559487|gb|ADM42151.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda FL6-60]
          Length = 399

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/344 (25%), Positives = 145/344 (42%), Gaps = 12/344 (3%)

Query: 1   MRQFLVIIAMAMLSN-IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+  +  ++++++  +              Y LLD ++G V+ E   D   +PASLTK+
Sbjct: 10  IRRLTLGASLSLVALPLLAADPAPPQINAKAYILLDYDSGRVLTEGNADERLDPASLTKI 69

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIV 113
           M +YV+   LK  K      + + K+A           S    K G  + +    + +++
Sbjct: 70  MASYVIGQALKSGKIAPGDMVVVGKDAWATGNPLLRGSSLMFLKPGDRVPVAELNRGVVI 129

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND ++A+A+ +  ++  FV  MN      GL  THF   HG+   G Y++ARDMA++
Sbjct: 130 QSGNDASIALADHVAGSQDAFVNLMNQYVGAWGLKNTHFRTVHGLDSEGQYSSARDMALI 189

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASA 232
           S R+  D P      + K       +  N N     + L  DG+KTGFT  +G N+VASA
Sbjct: 190 SQRLIADVPDEYQLNKEKEFTFNKIRQINRNRLLWDSSLNVDGVKTGFTGGAGHNLVASA 249

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNE 288
             G   LI+V+LGA     R   S  LL+ GF        I        +  +    S  
Sbjct: 250 TDGPMRLISVVLGAPTDRIRFDESKKLLTWGFRFYETVTPIKVGQPFTTQKVWYGERSEV 309

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + +    T       + +      +       +K   +   
Sbjct: 310 PLGVDKSAAVTIPRGQMKDLKASYTLTQSQLEAPLKKGQAVGTI 353


>gi|269139610|ref|YP_003296311.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda EIB202]
 gi|267985272|gb|ACY85101.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda EIB202]
          Length = 411

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 87/344 (25%), Positives = 145/344 (42%), Gaps = 12/344 (3%)

Query: 1   MRQFLVIIAMAMLSN-IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+  +  ++++++  +              Y LLD ++G V+ E   D   +PASLTK+
Sbjct: 22  IRRLTLGASLSLVALPLLAADPAPPQINAKAYILLDYDSGRVLTEGNADERLDPASLTKI 81

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIV 113
           M +YV+   LK  K      + + K+A           S    K G  + +    + +++
Sbjct: 82  MASYVIGQALKSGKIAPGDMVVVGKDAWATGNPLLRGSSLMFLKPGDRVPVAELNRGVVI 141

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND ++A+A+ +  ++  FV  MN      GL  THF   HG+   G Y++ARDMA++
Sbjct: 142 QSGNDASIALADHVAGSQDAFVNLMNQYVGAWGLKNTHFRTVHGLDSEGQYSSARDMALI 201

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASA 232
           S R+  D P      + K       +  N N     + L  DG+KTGFT  +G N+VASA
Sbjct: 202 SQRLIADVPDEYQLNKEKEFTFNKIRQINRNRLLWDSSLNVDGVKTGFTGGAGHNLVASA 261

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNE 288
             G   LI+V+LGA     R   S  LL+ GF        I        +  +    S  
Sbjct: 262 TDGPMRLISVVLGAPTDRIRFDESKKLLTWGFRFYETVTPIKVGQPFTTQKVWYGERSEV 321

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + +    T       + +      +       +K   +   
Sbjct: 322 PLGVDKSAAVTIPRGQMKDLKASYTLTQSQLEAPLKKGQAVGTI 365


>gi|323976776|gb|EGB71864.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TW10509]
          Length = 407

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQHVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 361


>gi|260450014|gb|ACX40436.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli DH1]
          Length = 400

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRFRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|291085651|ref|ZP_06353607.2| D-alanyl-D-alanine carboxypeptidase DacA [Citrobacter youngae ATCC
           29220]
 gi|291070535|gb|EFE08644.1| D-alanyl-D-alanine carboxypeptidase DacA [Citrobacter youngae ATCC
           29220]
          Length = 413

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++I +A         +   +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 30  LLILLAPTVQAAEQPTAPPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 89

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  L   +T+ K+A           S    K G  + + +  K +I++S ND 
Sbjct: 90  GQALKAGKINLNDMVTVGKDAWATGNPALRGSSVMFLKPGDQVAVSDLNKGVIIQSGNDA 149

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 150 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAAGQFSTARDMALLGKALIH 209

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 210 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSTNLNVDGMKTGTTAGAGYNLVASATQGDMR 269

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 270 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 329

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 330 AGSVTIPRGQLKNLKASFTLTEPQLTAPLKKGQVVGTI 367


>gi|256021090|ref|ZP_05434955.1| D-alanyl-D-alanine carboxypeptidase fraction C [Shigella sp. D9]
          Length = 400

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 150/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL  T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLINTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|194438401|ref|ZP_03070491.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli 101-1]
 gi|301027029|ref|ZP_07190410.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           196-1]
 gi|307137467|ref|ZP_07496823.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           H736]
 gi|194422625|gb|EDX38622.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli 101-1]
 gi|299879457|gb|EFI87668.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           196-1]
          Length = 403

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|15800591|ref|NP_286605.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 EDL933]
 gi|15830173|ref|NP_308946.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. Sakai]
 gi|110641041|ref|YP_668771.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           536]
 gi|157157612|ref|YP_001462035.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           E24377A]
 gi|195936884|ref|ZP_03082266.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. EC4024]
 gi|209918088|ref|YP_002292172.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           SE11]
 gi|215485925|ref|YP_002328356.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218553425|ref|YP_002386338.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           IAI1]
 gi|218688622|ref|YP_002396834.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           ED1a]
 gi|218694313|ref|YP_002401980.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           55989]
 gi|218699214|ref|YP_002406843.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           IAI39]
 gi|218704263|ref|YP_002411782.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           UMN026]
 gi|254792035|ref|YP_003076872.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. TW14359]
 gi|260843090|ref|YP_003220868.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli O103:H2
           str. 12009]
 gi|260854131|ref|YP_003228022.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli O26:H11
           str. 11368]
 gi|260867013|ref|YP_003233415.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli O111:H-
           str. 11128]
 gi|261225489|ref|ZP_05939770.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|293433137|ref|ZP_06661565.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           B088]
 gi|306812759|ref|ZP_07446952.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           NC101]
 gi|307314524|ref|ZP_07594127.1| Beta-lactamase [Escherichia coli W]
 gi|312969138|ref|ZP_07783345.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 2362-75]
 gi|12513851|gb|AAG55215.1|AE005265_5 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6
           [Escherichia coli O157:H7 str. EDL933]
 gi|13360378|dbj|BAB34342.1| D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6
           [Escherichia coli O157:H7 str. Sakai]
 gi|110342633|gb|ABG68870.1| penicillin-binding protein 6 precursor [Escherichia coli 536]
 gi|157079642|gb|ABV19350.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E24377A]
 gi|209775538|gb|ACI86081.1| D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6
           [Escherichia coli]
 gi|209775540|gb|ACI86082.1| D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6
           [Escherichia coli]
 gi|209775542|gb|ACI86083.1| D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6
           [Escherichia coli]
 gi|209775544|gb|ACI86084.1| D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6
           [Escherichia coli]
 gi|209775546|gb|ACI86085.1| D-alanyl-D-alanine carboxypeptidase penicillin-binding protein 6
           [Escherichia coli]
 gi|209911347|dbj|BAG76421.1| penicillin-binding protein 6 [Escherichia coli SE11]
 gi|215263997|emb|CAS08338.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218351045|emb|CAU96749.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli 55989]
 gi|218360193|emb|CAQ97743.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli IAI1]
 gi|218369200|emb|CAR16955.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli IAI39]
 gi|218426186|emb|CAR07008.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli ED1a]
 gi|218431360|emb|CAR12238.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli UMN026]
 gi|222032568|emb|CAP75307.1| Penicillin-binding protein 6 [Escherichia coli LF82]
 gi|254591435|gb|ACT70796.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli O157:H7 str. TW14359]
 gi|257752780|dbj|BAI24282.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli O26:H11
           str. 11368]
 gi|257758237|dbj|BAI29734.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli O103:H2
           str. 12009]
 gi|257763369|dbj|BAI34864.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli O111:H-
           str. 11128]
 gi|281177974|dbj|BAI54304.1| penicillin-binding protein 6 [Escherichia coli SE15]
 gi|284920692|emb|CBG33755.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Escherichia coli 042]
 gi|291323956|gb|EFE63378.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           B088]
 gi|305853522|gb|EFM53961.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           NC101]
 gi|306905947|gb|EFN36469.1| Beta-lactamase [Escherichia coli W]
 gi|307552682|gb|ADN45457.1| penicillin-binding protein 6 precursor [Escherichia coli ABU 83972]
 gi|312286540|gb|EFR14453.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 2362-75]
 gi|312945356|gb|ADR26183.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315060077|gb|ADT74404.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli W]
 gi|320637705|gb|EFX07497.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. G5101]
 gi|320642829|gb|EFX12030.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H- str. 493-89]
 gi|320648286|gb|EFX16941.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H- str. H 2687]
 gi|320654123|gb|EFX22191.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320659747|gb|EFX27303.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664217|gb|EFX31368.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323155789|gb|EFZ41958.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli EPECa14]
 gi|323159661|gb|EFZ45640.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli E128010]
 gi|323165770|gb|EFZ51556.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella sonnei 53G]
 gi|323172242|gb|EFZ57880.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli LT-68]
 gi|323175540|gb|EFZ61135.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1180]
 gi|323185244|gb|EFZ70609.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1357]
 gi|323191008|gb|EFZ76275.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli RN587/1]
 gi|323379365|gb|ADX51633.1| Beta-lactamase [Escherichia coli KO11]
 gi|327253626|gb|EGE65255.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli STEC_7v]
          Length = 400

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|332970912|gb|EGK09888.1| D-alanyl-D-alanine carboxypeptidase DacA [Psychrobacter sp.
           1501(2011)]
          Length = 412

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 89/339 (26%), Positives = 150/339 (44%), Gaps = 7/339 (2%)

Query: 2   RQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + FL+    +A+ S                Y L+D +TG ++AE   D P  PASLTK+M
Sbjct: 34  KSFLLGSSILAVSSASLAATVPPPEMDNTAYILMDYDTGAILAEKNADQPLPPASLTKMM 93

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T++++   L   +     P+ +S+NA        S        + ++ + L+ +I++S N
Sbjct: 94  TSHIIEKKLMSGELKEDEPVIMSENAWCRGTSDQSCMYVPVHKSASVIDMLRGIIIQSGN 153

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D + A+AE +  +E+ F Q MN  +K LG++ T+F+NA G+    H+ +ARD+AIL+  I
Sbjct: 154 DASKAMAEHIAGSEQAFAQLMNAEAKELGMTNTNFVNATGMPDENHHASARDLAILARAI 213

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                 Y   +  K          N N  + T    DG+KTG T A+G+ + AS+++ D 
Sbjct: 214 IKQGGDYYKIYSEKEFTYNNITQGNRNALLRTDPTVDGLKTGHTDAAGYCLAASSLRNDM 273

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISE 294
            LI+VI+G+     R   S  LL+ GF + + +        +          NEV   + 
Sbjct: 274 RLISVIMGSKSMQARADQSRELLNWGFGHFSTKVVAPANQFVDTVPVYFGEKNEVKVATG 333

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           E           +         +       K   +   I
Sbjct: 334 ETLKVLVAKTQSDKVSTVINMSDDIQAPIAKGQEVGRMI 372


>gi|285017609|ref|YP_003375320.1| D-alanyl-D-alanine carboxypeptidase [Xanthomonas albilineans GPE
           PC73]
 gi|283472827|emb|CBA15332.1| probable d-alanyl-d-alanine carboxypeptidase protein [Xanthomonas
           albilineans]
          Length = 402

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 11/328 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
               +      + L+D  +G V+A         PAS+TK+MT+YVV + LK+ K      
Sbjct: 42  PPAPKPAVSKSWVLMDYASGQVLAGENEHLRVAPASITKVMTSYVVAAELKQGKIKRDDQ 101

Query: 80  ITISKNASE-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           + +S+ A          S S F    T  L++  K + V+S ND A+A+AE    +E+ F
Sbjct: 102 VMLSERAWREGGAGTDGSYSGFPVNQTARLEDMEKGMAVQSGNDAAIALAEHTAGSEEAF 161

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
              MNN +  +G++ +HF+NAHG+   GHYTTA D+A+L   +  D+P+   Y +I+   
Sbjct: 162 ANLMNNYAAKIGMTGSHFVNAHGLSAEGHYTTAYDLALLGRAMVRDYPETYAYNKIREFR 221

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +     PN N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R +
Sbjct: 222 VGDITQPNRNLLLWRDPSVDGIKTGHTSEAGYCLLSSAQRGDQRLIAVVMGDSSEKQRAE 281

Query: 255 VSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTTQKEIINYNT 308
            S +LL+ GF      +      +      ++      +  +++   V   +        
Sbjct: 282 DSLALLNWGFRFFETHRLYEPGKQVAQQRVWKGTEKQVLLGVAQPLLVSVPRGRYNELKP 341

Query: 309 QMKEAKDKESHFIDFEKITLLKNKITKK 336
            +   K   +     + I  ++  +  K
Sbjct: 342 SIDVPKTLTAPIKQGQAIGTVRVTLDGK 369


>gi|308174134|ref|YP_003920839.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307606998|emb|CBI43369.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552733|gb|AEB23225.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
           TA208]
 gi|328912469|gb|AEB64065.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus amyloliquefaciens LL3]
          Length = 389

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---------KLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +  + + +L       + A+ +         +     L++ +TG ++         
Sbjct: 1   MKRLISTLLIGILLTASAPSAFAKPDGKHTSELAHEAKSAVLIERDTGSILYNKNSRERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L +    ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDKGNIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E+ FV  MN  +K LGL  T F N  G+ + GHY++A DMA
Sbjct: 121 AIASGNDASVAMAEYIAGSEEDFVSRMNKKAKELGLKDTSFKNPTGLPEKGHYSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
            ++  +            +   ++    K     NTN  +  + G DG+KTGFT  + + 
Sbjct: 181 KMAKELLKYDKITQFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGFTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQ 283
           + A+A +G+  +IAV+ GA     RN     +L   F                     + 
Sbjct: 241 LTATAKKGNMRVIAVVFGASTPKERNAQVTKMLDYAFSQFKTHPLYKRNQIVGSVKVKKG 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                    SE +    K+  N +   KE K   +     +K  +L + + KK
Sbjct: 301 KQKLIKLTTSEPISLLAKKGENMDKVKKEVKINSNVTAPVKKGEVLGSLVLKK 353


>gi|289578311|ref|YP_003476938.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           italicus Ab9]
 gi|289528024|gb|ADD02376.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           italicus Ab9]
          Length = 381

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 92/346 (26%), Positives = 155/346 (44%), Gaps = 11/346 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ L ++   +++  F   + A       K     L++ NTG ++ E     P  PAS+T
Sbjct: 3   KKILTLLVSVIIAISFILDATAYADTLNLKAKSAILMEANTGQILYEKDSHKPLPPASVT 62

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    +   K  ++  +  SK+A +   +    + G  MT+D+ +K + + SAN
Sbjct: 63  KVMTLLLAIEAIDSGKIKISDKVVTSKHAFDMGGTQIYLEIGEEMTVDDLMKAIAMNSAN 122

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  TE+ FV+ MN  +K LG   T F NA G+   GH T+  D+A++S  +
Sbjct: 123 DASVALAEYIAGTEENFVEIMNKRAKELGAKNTTFKNATGLPDEGHLTSVYDIAMISREL 182

Query: 178 K-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              +        ++  L        NTN  +  + G DG+KTG T  + + + A+A + D
Sbjct: 183 VKHESIFKYLTNKLDSLRNGKFSLINTNKLLWRYKGVDGIKTGSTSEALYCMAATAKRAD 242

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNI- 292
             LIAV+ GA D  TR   +A LL  GF N    K  +           +     V  + 
Sbjct: 243 TRLIAVVFGAPDSETRFSETAKLLDYGFANYESVKIASKGQSFGNVKVLKGKKETVSGVC 302

Query: 293 --SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              E +   + E  N  T+++      +       I  +K     K
Sbjct: 303 HDDEYILIKKGEGKNIKTEVELKNAVLAPLAKEVPIGTVKITQDGK 348


>gi|300916310|ref|ZP_07133057.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           115-1]
 gi|300416399|gb|EFJ99709.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           115-1]
          Length = 407

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDIVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 361


>gi|288555970|ref|YP_003427905.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudofirmus OF4]
 gi|288547130|gb|ADC51013.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudofirmus OF4]
          Length = 386

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 153/351 (43%), Gaps = 15/351 (4%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR+ L  ++A+ ++  +   +  A               +++ +TG V+ E        P
Sbjct: 1   MRKVLSTLLAIVLVCTLAAPMGYAAEKQASLAENASSAIVIERDTGEVLFEKNSHDQLPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MT  ++   + E        I  S+NA+    S    + G  MT+ + LK + V
Sbjct: 61  ASMTKIMTMLLIMEAIDEGSLSYDDKIRTSENAASMGGSQVFLEPGEEMTVTDMLKAIAV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND +VA+AE L  TE++FV  MN+ +K LGL  T+FMN++G+    HYTTA D+A++
Sbjct: 121 ASGNDASVAMAEHLGGTEEEFVSMMNDKAKELGLENTNFMNSNGLPAENHYTTAYDLAMI 180

Query: 174 SWRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           S  +            +   ++          NTN  V  + G DG+KTGFT  + + + 
Sbjct: 181 SKELLKYEDITKFTGIYEDYLRQDSENKFWLVNTNKLVKFYPGVDGLKTGFTREAMYCLT 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
           A+A + D  +I+VI+GA     RN     +L   F      K              + + 
Sbjct: 241 ATAQKNDMRVISVIMGAPTPKERNAQITEMLDYSFSQFKTHKLYERDHILAEVKVSKGDK 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +      SE V    K+  + +   +  +  +       K   +     ++
Sbjct: 301 NQIPVQTSESVSILTKKGESIDDVTERMEIDQQLHAPLAKGDTVGTLYIER 351


>gi|323705320|ref|ZP_08116895.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535222|gb|EGB24998.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 384

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 10/339 (2%)

Query: 2   RQFLVIIAMAMLSNIF---PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +  L  +   ++ ++       +     K     L+D NTG V+ E        PAS+TK
Sbjct: 4   KTLLFTLIFVLICSVLLENFAYADNFNLKSKSAILMDANTGKVLYEKNSHEELPPASVTK 63

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +V   L   K   T  +  S++A +   +    + G  MT+D+ LK + + SAND
Sbjct: 64  VMTMLLVIEALDSGKIKTTDKVVTSEHAYDMGGTQIYLEVGEEMTVDDLLKSVAMNSAND 123

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +E+KFV+ MN  +K LG   T+F NA G+ + GHYT+  DMA++S  + 
Sbjct: 124 ASVALAEYISGSEEKFVEEMNKRAKELGAKNTNFKNASGLPEDGHYTSVYDMALISRELV 183

Query: 179 -TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                      +I  +        NTN  +  + GADG+KTG T  + + + A+A +GD 
Sbjct: 184 KHKNVFKYLTDKIDSVRNGKFSLANTNKLLWNYQGADGIKTGSTSEALYCLSATAKRGDT 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPN 291
             IAV+ GA D  TR K ++ LL  GF N   +K +              QQ+  N +  
Sbjct: 244 RFIAVVFGAPDSATRFKEASKLLDYGFANFETKKVVEAGKVYGNIKVLKGQQDYVNAISQ 303

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             E +   + E  N    +   K  ++      +I  +K
Sbjct: 304 NDEYILLKKGESKNIKQIVSLNKYVDAPVKAGSEIGTVK 342


>gi|261855867|ref|YP_003263150.1| beta-lactamase [Halothiobacillus neapolitanus c2]
 gi|261836336|gb|ACX96103.1| Beta-lactamase [Halothiobacillus neapolitanus c2]
          Length = 425

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 141/324 (43%), Gaps = 4/324 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +   +  A       Y LLD NTG +I +   D P  PAS+TKLMT+Y+VFS LK     
Sbjct: 67  VAMPVPGAPVLSARSYVLLDANTGQIIVQKNADEPVPPASITKLMTSYLVFSALKSGNIH 126

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +   +TISK A E   S    + G  +++ N L  +IV+S ND A A+AE +   E+ FV
Sbjct: 127 MDDMVTISKKAWEMQGSKMFIEVGKQVSVKNLLMGMIVQSGNDAATALAEYVGGNEQSFV 186

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQIKGLE 194
             MN T+K LG++ TH+ +  G    GH  +ARD++ L   +   FP Y   +F+ K   
Sbjct: 187 SLMNATAKKLGMTKTHYEDPTGWPADGHVMSARDISTLFNALVKHFPNYYHEFFRQKVFT 246

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
             G K  N    +      DG KTG T  +GF +  S  Q    LIAV+LG    + RN 
Sbjct: 247 WNGIKQYNREKLLFRDNWVDGGKTGHTEEAGFCLATSGQQNGMRLIAVVLGTESDDARNN 306

Query: 255 VSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            + +LL+ GF    +         +      +  +++VP   ++                
Sbjct: 307 EAEALLNYGFRFYENVPVRQAKQVLATPDVFKGAADQVPVGLDKDLVVLVTKDQAKNLSV 366

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
                            +     K
Sbjct: 367 SMTINPKLIAPLAVDQPVGKLEVK 390


>gi|268590416|ref|ZP_06124637.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rettgeri DSM
           1131]
 gi|291314330|gb|EFE54783.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rettgeri DSM
           1131]
          Length = 403

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 144/330 (43%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +     +  A       Y L+D N+G V+AE+  D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  TFPNTSIPAAPAIDAEAYILIDYNSGKVLAESNADQRRDPASLTKMMTSYVIGQAIKSGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+  +A                K G  +++    + + ++S ND  VA+A+ +
Sbjct: 92  IGENDIVTVGNDAWATGNPVFKGSSLMFLKPGDRVSVSQLTRGINLQSGNDACVAMADYI 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
              +  FVQ MN     LGL  THF   HG+   G Y++ARDMA++   +  D P+    
Sbjct: 152 AGDQANFVQLMNGYVNKLGLKNTHFQTVHGLDAEGQYSSARDMALIGQALVRDVPEEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N       L  DG+KTG T A+G+N+VASA +GD  LI+V++G 
Sbjct: 212 YKEKEFTFNNIRQTNRNGLLWDKSLTVDGIKTGHTNAAGYNLVASATEGDMRLISVVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKE 302
                R+  S  LL+ GF      K +   +       +  + +     ++E++  T   
Sbjct: 272 KSSKGRDAESKKLLTYGFRFYETVKPLQANVDFASVPVWFGDENEVKLGVTEDLYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +               K   +   
Sbjct: 332 GRLKDLKASYELTTTELEAPLTKGQQVGTI 361


>gi|331682347|ref|ZP_08382966.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli H299]
 gi|331079978|gb|EGI51157.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli H299]
          Length = 403

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|331656861|ref|ZP_08357823.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli TA206]
 gi|331055109|gb|EGI27118.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli TA206]
          Length = 392

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 153/342 (44%), Gaps = 11/342 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R    +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT
Sbjct: 5   RVLHFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMT 64

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKS 115
           +YVV   LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S
Sbjct: 65  SYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQS 124

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L  
Sbjct: 125 GNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGK 184

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA Q
Sbjct: 185 ALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQ 244

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVP 290
           GD  LI+V+LGA     R   S  LL+ GF        I      + +  +  + S    
Sbjct: 245 GDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNL 304

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              E    T       N +      +       +K  ++   
Sbjct: 305 GAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 346


>gi|304316784|ref|YP_003851929.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778286|gb|ADL68845.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 381

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 160/341 (46%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFP----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++ +  I +  L           +     K     L+D +TG V+ E        PAS+
Sbjct: 2   LKKIISFILIFTLIYTIITEDIAYADNFDLKSKSAILMDASTGKVLYEKNSHEELPPASV 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT  +V   L   K   T  +  S++A +   +    + G  MT+D+ LK + + SA
Sbjct: 62  TKVMTMLLVMEALDSGKIKTTDKVVTSEHAFDMGGTQIYLEVGEEMTVDDLLKSVAMNSA 121

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND +VA+AE +  +E+KFV+ MN  +K LG   T+F NA G+ +  HYT+  D+A++S  
Sbjct: 122 NDASVALAEYISGSEEKFVEEMNKRAKELGAKNTNFKNASGLPEKDHYTSVYDIALISRE 181

Query: 177 IK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           +            +I  +        NTN  +  + GADG+KTG T  + + + A+A +G
Sbjct: 182 LVKHKGIFKYLTDKIDSVRNGKFSLANTNKLLWRYQGADGIKTGSTSEALYCLSATAKRG 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI------IKDFYQQNLSNEV 289
           D   IAVI GA D NTR K ++ LL  GF N   +K +              +Q+  N V
Sbjct: 242 DTRFIAVIFGAPDSNTRFKEASKLLDYGFANFETKKVVEAGKIYGTVKVLKGEQDYINAV 301

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            N  E V   + E  N   ++   K  E+      KI  +K
Sbjct: 302 ANTDEYVLLKKGEAKNIKQEIIINKYVEAPIKVGAKIGTIK 342


>gi|119477453|ref|ZP_01617644.1| D-alanyl-D-alanine carboxypeptidase [marine gamma proteobacterium
           HTCC2143]
 gi|119449379|gb|EAW30618.1| D-alanyl-D-alanine carboxypeptidase [marine gamma proteobacterium
           HTCC2143]
          Length = 384

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 92/348 (26%), Positives = 148/348 (42%), Gaps = 15/348 (4%)

Query: 1   MRQFLVIIAMAMLS----NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M ++L+I++    +         +    +     Y L+D ++G VI E   D    PASL
Sbjct: 1   MHKYLIIVSSLFFAHWVAAAPAVIPAPPSIAASGYILIDADSGRVITEKNADEKLPPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLL 111
           TKLMT+YV+   L E     T  +TIS+NA    P+         + G  + L +  K +
Sbjct: 61  TKLMTSYVLSYELAEGNVANTDMVTISENAWAQNPTFAGSSLMWIEVGKQVNLKDLHKGV 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S ND +VA+AE L  +E  F   MN  +  LG++ +HF+NAHG+    HY TARD+A
Sbjct: 121 VISSGNDASVAVAEHLAGSESAFADVMNQHAALLGMTGSHFVNAHGLPDPEHYMTARDLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
           ILS      +P+    +             N N  +      DG+KTG T  +GF +V+S
Sbjct: 181 ILSK-AILKYPEEYALYSQPDYTYNNITQTNRNRLLWKDDSVDGLKTGHTEEAGFCLVSS 239

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSN 287
           A +    LI+V++GA  ++ R   S  LLS GF      +  +          +     +
Sbjct: 240 AKRNGMRLISVVMGAKSQSAREVESQKLLSYGFRYFETHQLYSTGDALTATKIWAGAGDS 299

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +  ++  T      +          E               + +
Sbjct: 300 LSLGVERDIHLTIPRG-KHKDIEAVMDLAEFIKAPVSAGNEYGELVIR 346


>gi|194367218|ref|YP_002029828.1| Serine-type D-Ala-D-Ala carboxypeptidase [Stenotrophomonas
           maltophilia R551-3]
 gi|194350022|gb|ACF53145.1| Serine-type D-Ala-D-Ala carboxypeptidase [Stenotrophomonas
           maltophilia R551-3]
          Length = 406

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A    +    PAS+TK+MT+YV+ + +K  K      + +S+ A 
Sbjct: 54  SKAWVLMDYATGQVLAGENINEQLAPASITKVMTSYVIAAEVKNGKVRPDDQVMMSERAW 113

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 114 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 173

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  +HF+NAHG+   GH+++A D+A+L   +  D+P+   Y +IK  ++   K PN
Sbjct: 174 AKIGMKNSHFVNAHGLTAPGHHSSAYDLALLGRAMVRDYPETYAYNKIKEFQVGNIKQPN 233

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ L+AV+LG      R   S +LL+ 
Sbjct: 234 RNLLLWRDGSVDGIKTGHTSEAGYCLMSSAQRGDQRLVAVVLGGQSEKQRADDSLALLNW 293

Query: 263 GFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF      +             ++         +++   V   +    +    +   K  
Sbjct: 294 GFRFFETHRLYEPGKAVAEHKVWKGTTDKVQLGVAQPMLVSVPRGRYNDLKPSIDVPKTL 353

Query: 317 ESHFIDFEKITLLKNKITKK 336
           E+ F   ++I  +K  +  K
Sbjct: 354 EAPFTAGQQIGTVKVMLDGK 373


>gi|197284323|ref|YP_002150195.1| D-alanyl-D-alanine carboxypeptidase fraction A [Proteus mirabilis
           HI4320]
 gi|227358533|ref|ZP_03842858.1| D-alanyl-D-alanine carboxypeptidase fraction A [Proteus mirabilis
           ATCC 29906]
 gi|194681810|emb|CAR41057.1| putative penicillin-binding protein [Proteus mirabilis HI4320]
 gi|227161244|gb|EEI46318.1| D-alanyl-D-alanine carboxypeptidase fraction A [Proteus mirabilis
           ATCC 29906]
          Length = 403

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 88/349 (25%), Positives = 147/349 (42%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMAMLS-------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R F     +  +S        +   +      +   Y L+D N+G V+AE   D   +PA
Sbjct: 13  RLFSATFILLAISHHAIADDTLKTMIPAVPNIEAESYILIDYNSGKVLAEKNADVRRDPA 72

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTK+MT+YV+   ++  K      + I + A                K G  +T+    
Sbjct: 73  SLTKMMTSYVIGQAIRAGKISNNDIVPIGEEAWATGNPVFRGSSLMFLKPGDKVTVSQLT 132

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + + ++S ND  VA+A  +  ++  FV  MN+  K LGL  T F   HG+   G Y++AR
Sbjct: 133 RGINLQSGNDACVAMASYVAGSQDTFVTMMNDYVKRLGLQNTQFQTVHGLDAPGQYSSAR 192

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           DMA++   +  D P+    ++ K       +  N N     T L  DG+KTG T A+G+N
Sbjct: 193 DMALIGAALIRDVPEEYAIYKEKEFTYNNIRQTNRNGLLWDTSLNVDGIKTGHTEAAGYN 252

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQ 283
           +VASA +G+  LI+ ++G      R+  S  LL+ GF      K +        +  +  
Sbjct: 253 LVASATEGNMRLISAVMGGHSSKGRDAESKKLLTWGFRFFETVKPLQVGKEFAAEPIWYG 312

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +       + ++V  T       + +     D         K  ++   
Sbjct: 313 DTDKVQLGVDKDVYLTIPRGRLKDLKASYVLDNVELHAPVSKNQVVGTI 361


>gi|229111549|ref|ZP_04241100.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock1-15]
 gi|228671931|gb|EEL27224.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock1-15]
          Length = 385

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEEVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|218557743|ref|YP_002390656.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           S88]
 gi|218364512|emb|CAR02194.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli S88]
 gi|294493575|gb|ADE92331.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli IHE3034]
 gi|307627752|gb|ADN72056.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           UM146]
          Length = 400

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLMEPQLTAPLKKGQVVGTI 354


>gi|71905933|ref|YP_283520.1| penicillin-binding protein 6 [Dechloromonas aromatica RCB]
 gi|71845554|gb|AAZ45050.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Dechloromonas aromatica RCB]
          Length = 391

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 8/343 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF-LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +   +++++          L +        + LL+  +  V+     D    PASLTKLM
Sbjct: 18  KTAFILLSIVTAGQAMAQQLPVPPALAAKSWLLLEVGSNQVLTAEKSDERLEPASLTKLM 77

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+ F+ +++K   L+  + +S+ A     S    +  + + +++ +K +IV+S ND  
Sbjct: 78  TAYLTFAAIRQKTIGLSQTLPVSEKAWRTGGSKMFVRVDTQVPVEDLIKGMIVQSGNDAC 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           V +AE +  +E+ F Q MN  ++ LG++ +HF+N+ G+    HYTTARD+++L+  +  D
Sbjct: 138 VTLAEGIAGSEENFAQMMNREAQRLGMTNSHFINSTGLPDPQHYTTARDLSLLASALIRD 197

Query: 181 FPQYM-HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           FP+    Y+ +K         PN N  +      DG+KTG T A+G+ +++SA++  + L
Sbjct: 198 FPEDYKKYYSMKEFRYNNITQPNRNRLLFIDPTVDGVKTGHTEAAGYCLISSALRDKRRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE----- 294
           ++V+LG    + R   S  LL+ GF +                +        +       
Sbjct: 258 LSVVLGTTSDSARATESQKLLNWGFISYDSVALFAKDQAVATLRVWKGAQSEVKAGFTSD 317

Query: 295 -EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +   +       +         +     +KI  LK  I  K
Sbjct: 318 LGIAVPKGYADKVKSDFIAEPRLIAPVEAGQKIGTLKVSIDGK 360


>gi|332282314|ref|ZP_08394727.1| penicillin-binding protein 6 [Shigella sp. D9]
 gi|332104666|gb|EGJ08012.1| penicillin-binding protein 6 [Shigella sp. D9]
          Length = 407

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL  T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLINTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 361


>gi|315135488|dbj|BAJ42647.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           DH1]
          Length = 403

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRFRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|261251421|ref|ZP_05943995.1| D-alanyl-D-alanine carboxypeptidase [Vibrio orientalis CIP 102891]
 gi|260938294|gb|EEX94282.1| D-alanyl-D-alanine carboxypeptidase [Vibrio orientalis CIP 102891]
          Length = 388

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/340 (28%), Positives = 145/340 (42%), Gaps = 10/340 (2%)

Query: 4   FLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            L  I+++      P +           Y L+D +TG V+ +   +   NPASLTKLMTA
Sbjct: 11  LLSTISLSFGVTAAPTIIPDPPALGAKGYILMDYHTGEVLVQKNSEKKLNPASLTKLMTA 70

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV    +      L   + IS+NA        S    + G+ + L +  + LIV+S ND 
Sbjct: 71  YVAGQEVNSGNIALDDQVRISRNAWAKNFPDSSKMFIEVGTDVQLMDLYRGLIVQSGNDA 130

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VAIAE +  +E  FV  MN+ S+ LGL+ T + N HG+   G Y+T  D+A+LS  I  
Sbjct: 131 SVAIAEHVAGSEDAFVSLMNSWSQKLGLANTSYTNPHGLDSDGLYSTPYDIALLSQAIIR 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +        G    N N       L  DGMKTG+T  +G+++  SA  GD  
Sbjct: 191 DLPDIYPLYSETAYTYNGITQYNRNGLLRDRSLNVDGMKTGYTSGAGYSLATSATSGDMR 250

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           LI+V++G+    +R   S  LLS GF                    +     +    + E
Sbjct: 251 LISVVMGSSSAKSRESESKQLLSYGFRFFDTIAPTKPTDTLAEARVWMGETDHVAAGVDE 310

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            V  T  +    N  + E +          K   +   I 
Sbjct: 311 TVLLTLPKGD-ANKLIAEVEFTGELTAPIRKGDPIGKVIY 349


>gi|167628449|ref|YP_001678948.1| d-alanyl-d-alanine carboxypeptidase [Heliobacterium modesticaldum
           Ice1]
 gi|167591189|gb|ABZ82937.1| d-alanyl-d-alanine carboxypeptidase [Heliobacterium modesticaldum
           Ice1]
          Length = 386

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 82/337 (24%), Positives = 142/337 (42%), Gaps = 7/337 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +V   +A L  +  + +     +     L+D  TG ++ E        PAS+TKLMT  V
Sbjct: 12  MVFFFLASLIPVQAWAAPPLETQADSAVLMDPTTGAILFEKNSHKRVAPASVTKLMTLLV 71

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  +++ KA L   +  S+ A E   S    + G  M + + L  + V SAND  VA+A
Sbjct: 72  AFEAIEQGKASLDDKVVTSQRAFEMGGSQIYLEPGEEMVMRDLLISIAVHSANDACVAVA 131

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  + + +V  MN  +++LGL  THFMN HG+    HYT+A DMA+++          
Sbjct: 132 EHISGSYEAYVDDMNKKAQSLGLKDTHFMNPHGLPVDNHYTSAHDMAVIAREALKHPTLM 191

Query: 185 M----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                 + +I+    K  +  N N  +  + G DG KTG+T  + + +V++  + +  LI
Sbjct: 192 QFVAIKHHKIRESSSKPMQLDNHNRLLWWYPGTDGFKTGWTSEAKYCLVSTVERDNLRLI 251

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVC 297
           A + G  +     K S  L + GF   T +          +    +     V  +++   
Sbjct: 252 ASVFGVPEIRGHFKESMKLYNYGFSRYTFKSVAKPGEPLGEVAVGKGRKERVQVVAQGKP 311

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               E           + +        +   L + + 
Sbjct: 312 GLIVERGKEKGIESRVELEPYATAPIAQGQKLGDLVI 348


>gi|212709668|ref|ZP_03317796.1| hypothetical protein PROVALCAL_00715 [Providencia alcalifaciens DSM
           30120]
 gi|212687479|gb|EEB47007.1| hypothetical protein PROVALCAL_00715 [Providencia alcalifaciens DSM
           30120]
          Length = 401

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 151/339 (44%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L +  +   S       +A       + L+D N+G ++A + PD   +PASLTK+MT+YV
Sbjct: 17  LSLFVVMSASVYAAQTPVAPQVDAKAFVLMDYNSGKILASSNPDERLDPASLTKIMTSYV 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           V   +K  K      +T+S+ A                K    +++ +  K ++++S ND
Sbjct: 77  VGQAVKAGKITPQDMVTVSEAAWATGNPILKGSSLMFLKPKDRVSVLDLNKGVVIQSGND 136

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+AE +  +++ FV  MN   + +GL+ THF   HG+   G Y+TARDMA+L+  + 
Sbjct: 137 ASIALAEHVAGSQESFVDLMNGYVQKIGLTNTHFKTVHGLDSDGQYSTARDMAVLAQALI 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N       L  DG+KTG T  +G N+VASA  G  
Sbjct: 197 RDVPDEYVLHKEKEFTFNNIRQPNRNRLLWSQNLKVDGVKTGHTSGAGHNLVASATDGPM 256

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I        +  +  ++S     + 
Sbjct: 257 RLISVVLGAPSDRVRFAESEKLLTWGFRFFETVTPIKGDAVLQKQRVWFGDISEVPLGVE 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +V  T  +    N ++    D +S          +   
Sbjct: 317 NDVAVTIPKGQLQNLKVDIKLDNDSLEAPLALNQKVGTI 355


>gi|312622222|ref|YP_004023835.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202689|gb|ADQ46016.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 386

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 6/313 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D +TG ++ E        PAS+TK+MT  ++   +++ K  L+  +  S+
Sbjct: 38  EISAKSAILVDFDTGKILYEKNSHEKLPPASITKIMTMILICEAIEKGKIKLSDKVVASQ 97

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NAS    S    K+   MT++  LK + + SAND  VA+AE +  + ++FV  MN  +K 
Sbjct: 98  NASSLGGSQVYLKENEEMTVEELLKSIAIASANDACVALAEHIAGSVQEFVYMMNKKAKE 157

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNT 203
            G+  T+F+N +G+    HYT+A D+AI+S  +      +      +  +        NT
Sbjct: 158 FGMLDTNFVNPYGLDAENHYTSAYDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNT 217

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  V  + G  G+KTG T  + F + ASA++    LIAVI+GA D  TR   +  LL  G
Sbjct: 218 NKLVRFYRGCTGVKTGSTDKAKFCVSASALRNGLHLIAVIMGAPDSKTRFNEATKLLDWG 277

Query: 264 FYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           F N +     +                     +S +V    K+      + K A  ++  
Sbjct: 278 FANFSMYSPYSKGYCFGKVKVKNGIEKEVEAVLSTDVKLIVKKGDESTVESKVALPQQ-I 336

Query: 320 FIDFEKITLLKNK 332
               +    +   
Sbjct: 337 SAPVKTGQKIGKL 349


>gi|238920432|ref|YP_002933947.1| D-alanyl-D-alanine carboxypeptidase DacC [Edwardsiella ictaluri
           93-146]
 gi|238870001|gb|ACR69712.1| D-alanyl-D-alanine carboxypeptidase DacC [Edwardsiella ictaluri
           93-146]
          Length = 450

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 86/344 (25%), Positives = 144/344 (41%), Gaps = 12/344 (3%)

Query: 1   MRQFLVIIAMAMLSNIF-PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+  +  ++++++                 Y LLD ++G V+ E   D   +PASLTK+
Sbjct: 61  IRRLTLGASLSLVALPLQAADPAPPQVNAKAYILLDYDSGRVLTEGNADERLDPASLTKI 120

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIV 113
           M +YV+   LK  K      + + K+A           S    K G  + +    + +++
Sbjct: 121 MASYVIGQALKSGKIAPGDMVVVGKDAWATGNPLLRGSSLMFLKPGDRVPVAELNRGVVI 180

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND ++A+A+ +  ++  FV  MN      GL  THF   HG+   G Y++ARDMA++
Sbjct: 181 QSGNDASIALADHVAGSQDTFVNLMNQYVSAWGLKNTHFQTVHGLDSEGQYSSARDMALI 240

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASA 232
           S R+  D P      + K       +  N N     + L  DG+KTGFT  +G N+VASA
Sbjct: 241 SQRLIADVPDEYQLNKEKEFTFNKIRQINRNRLLWDSSLNVDGVKTGFTSGAGHNLVASA 300

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNE 288
           I G   LI+V+LGA     R   S  LL+ GF        +        +  +       
Sbjct: 301 IDGPMRLISVVLGAPTDRVRFDESKKLLTWGFRFYETVTPLKVGQPFTTQKVWYGERREV 360

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + +    T       + +      +       +K   +   
Sbjct: 361 PLGVDKSASVTIPRGQMKDLKASYTLTQSQLEAPLKKGQAVGTI 404


>gi|26246814|ref|NP_752854.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           CFT073]
 gi|227884197|ref|ZP_04002002.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           83972]
 gi|261258542|ref|ZP_05951075.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293409214|ref|ZP_06652790.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           B354]
 gi|300817100|ref|ZP_07097319.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           107-1]
 gi|300823980|ref|ZP_07104102.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           119-7]
 gi|300895754|ref|ZP_07114347.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           198-1]
 gi|300907171|ref|ZP_07124834.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 84-1]
 gi|300924447|ref|ZP_07140417.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           182-1]
 gi|300939883|ref|ZP_07154518.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 21-1]
 gi|300991867|ref|ZP_07179692.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           200-1]
 gi|300993443|ref|ZP_07180385.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 45-1]
 gi|301020649|ref|ZP_07184722.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 69-1]
 gi|301051233|ref|ZP_07198062.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           185-1]
 gi|301303598|ref|ZP_07209720.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           124-1]
 gi|301325847|ref|ZP_07219280.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 78-1]
 gi|309795413|ref|ZP_07689831.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           145-7]
 gi|331646058|ref|ZP_08347161.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli M605]
 gi|331651852|ref|ZP_08352871.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli M718]
 gi|331676578|ref|ZP_08377274.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli H591]
 gi|26107214|gb|AAN79397.1|AE016758_1 Penicillin-binding protein 6 precursor [Escherichia coli CFT073]
 gi|227838949|gb|EEJ49415.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           83972]
 gi|291469682|gb|EFF12166.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           B354]
 gi|300297140|gb|EFJ53525.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           185-1]
 gi|300305477|gb|EFJ59997.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           200-1]
 gi|300360328|gb|EFJ76198.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           198-1]
 gi|300398577|gb|EFJ82115.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 69-1]
 gi|300401046|gb|EFJ84584.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 84-1]
 gi|300406557|gb|EFJ90095.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 45-1]
 gi|300419332|gb|EFK02643.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           182-1]
 gi|300455265|gb|EFK18758.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 21-1]
 gi|300523491|gb|EFK44560.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           119-7]
 gi|300530452|gb|EFK51514.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           107-1]
 gi|300841097|gb|EFK68857.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           124-1]
 gi|300847361|gb|EFK75121.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 78-1]
 gi|308121063|gb|EFO58325.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           145-7]
 gi|315257828|gb|EFU37796.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 85-1]
 gi|315292514|gb|EFU51866.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           153-1]
 gi|315299413|gb|EFU58665.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 16-3]
 gi|323947137|gb|EGB43148.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H120]
 gi|323967274|gb|EGB62697.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli M863]
 gi|323969597|gb|EGB64885.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TA007]
 gi|324009727|gb|EGB78946.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 57-2]
 gi|324013062|gb|EGB82281.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 60-1]
 gi|324015963|gb|EGB85182.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           117-3]
 gi|324116152|gb|EGC10075.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1167]
 gi|331044810|gb|EGI16937.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli M605]
 gi|331050130|gb|EGI22188.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli M718]
 gi|331075267|gb|EGI46565.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli H591]
          Length = 407

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 361


>gi|261343559|ref|ZP_05971204.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rustigianii
           DSM 4541]
 gi|282568708|gb|EFB74243.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rustigianii
           DSM 4541]
          Length = 403

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +     +  A T     Y L+D N+G V+AE+  D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  AFPNTSIPAAPTIDAEAYILIDYNSGKVLAESNADQRRDPASLTKMMTSYVIGQAIKSGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ ++A                K G  +++    + + ++S ND  VA+A+ +
Sbjct: 92  IGANDMVTVGEDAWATGNPIFKGSSLMFLKPGDRVSVSQLTRGINLQSGNDACVAMADHV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
              +  FV  MNN    LGL  THF   HG+   G Y++ARDMA++   +  D P+    
Sbjct: 152 AGDQSSFVNLMNNYVSKLGLQNTHFQTVHGLDAEGQYSSARDMALIGQALIRDVPEEYEI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N       L  DG+KTG T A+G+N+VASA  GD  LI+V++G 
Sbjct: 212 YKEKEFTFNNIRQTNRNGLLWDKSLAVDGIKTGHTDAAGYNLVASAKDGDMRLISVVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKE 302
                R+  S  LL+ GF      K +   ++      +  + S     + +++  T   
Sbjct: 272 KSSKGRDAESKKLLTYGFRFYETVKPLQAGVEFATTPVWFGDDSEVKLGVVDDLYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +              +K   +   
Sbjct: 332 GRLKDLKASYELTSTEIEAPLKKGQQVGVI 361


>gi|307265140|ref|ZP_07546699.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306919762|gb|EFN49977.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 381

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 11/346 (3%)

Query: 2   RQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ L ++   +L+  F       +     K     L++ NTG ++ E    +P  PAS+T
Sbjct: 3   KRLLTLLVSVILAISFVLNGTVYADTLNLKSKSAILIEANTGQILYEKDSHNPLPPASVT 62

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + SAN
Sbjct: 63  KVMTLLLAIEAIDSGKIKITDKVVTSKHAFDMGGTQIYLEVGEEMTVDDLMKAIAMNSAN 122

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  TE+ FV+ MN  +K LG   T F NA G+ + GH T+  D+A++S  +
Sbjct: 123 DASVALAEYIAGTEENFVEMMNKRAKELGAKNTTFKNATGLPEEGHLTSVYDIAMISREL 182

Query: 178 K-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              +        ++  L        NTN  +  + GADG+KTG T  + + + A+A +GD
Sbjct: 183 VKHESIFKYLTNKLDSLRNGKFSLINTNKLLWRYKGADGIKTGSTSEALYCMAATAKRGD 242

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS--- 293
             LIAV+ GA D  TR   +A LL  GF N    K  +        +    +   +S   
Sbjct: 243 TRLIAVVFGAPDSETRFSEAAKLLDYGFANYESVKVASKGQSFGNVKVFKGKKQAVSVVC 302

Query: 294 ---EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              E +   + E  N  T+++      +       I  +K     K
Sbjct: 303 RDDEYILIKKGEGKNIKTEVELKNAVLAPLAKEVPIGTVKITQDGK 348


>gi|320177827|gb|EFW52813.1| D-alanyl-D-alanine carboxypeptidase [Shigella boydii ATCC 9905]
 gi|332088903|gb|EGI94015.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella boydii 5216-82]
          Length = 400

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDARATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DG+KTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGIKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|320186097|gb|EFW60841.1| D-alanyl-D-alanine carboxypeptidase [Shigella flexneri CDC 796-83]
          Length = 403

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKDVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|228902586|ref|ZP_04066737.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis IBL 4222]
 gi|228857027|gb|EEN01536.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis IBL 4222]
          Length = 385

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAQKNGMRVISVVMGAPTSKERNNEVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   I    S+ V    K+  + +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKIDLVASDNVSLLMKKGESMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|147677558|ref|YP_001211773.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
 gi|146273655|dbj|BAF59404.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
          Length = 392

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 85/322 (26%), Positives = 140/322 (43%), Gaps = 6/322 (1%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +  A         LL+  TG +I E  P      AS+TKLMT  +    + E K  LT  
Sbjct: 39  VPAALETTAESAILLEPATGKIIYEKEPHKRLPMASVTKLMTLLLAVEAVDEGKFKLTDR 98

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +  S+NA E   S    + G  M+L + L  + ++SAND +VA+AE +  +E+ FVQ MN
Sbjct: 99  VVASENAWEMGGSQIYLEPGEEMSLWDLLLAIGLQSANDASVAVAEHIAGSEEAFVQAMN 158

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGLEIKGK 198
             +++LGL+ T+F+N HG+    HYT+A DMA++          + +   +   L     
Sbjct: 159 EKARSLGLNNTNFVNCHGLTADNHYTSAHDMAMILKEGLKSPLFRKISAMKEYELRGGAF 218

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           K  NTN  +  + GAD  KTG+T A+ + + +SA +    LI V+LG  +  +  + S  
Sbjct: 219 KLWNTNKLLWWYDGADAGKTGWTEAAKYCLASSAERDGLRLICVVLGTPEPQSHFRESTK 278

Query: 259 LLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           L   GF                     +    +     +E+V     +  +        +
Sbjct: 279 LFDYGFARYKAVNLAPAGEVAGTVRVGKGKAGSVKALTAEKVAVVVPKGED-KGFESRVE 337

Query: 315 DKESHFIDFEKITLLKNKITKK 336
                    +K   + + +  K
Sbjct: 338 LPGYIEAPVQKGQEIGSYVVTK 359


>gi|170681795|ref|YP_001742946.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           SMS-3-5]
 gi|187776239|ref|ZP_02801387.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188024947|ref|ZP_02775045.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4113]
 gi|189010000|ref|ZP_02804398.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189402327|ref|ZP_02781640.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189402936|ref|ZP_02792356.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189404286|ref|ZP_02788318.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4501]
 gi|189404921|ref|ZP_02812067.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC869]
 gi|189405883|ref|ZP_02824886.2| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC508]
 gi|191166209|ref|ZP_03028043.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B7A]
 gi|191173711|ref|ZP_03035234.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli F11]
 gi|193064478|ref|ZP_03045559.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E22]
 gi|193069405|ref|ZP_03050360.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E110019]
 gi|194428152|ref|ZP_03060695.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B171]
 gi|208814959|ref|ZP_03256138.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208822498|ref|ZP_03262817.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209400303|ref|YP_002269508.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217324128|ref|ZP_03440212.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. TW14588]
 gi|291281838|ref|YP_003498656.1| Penicillin-binding protein 6 [Escherichia coli O55:H7 str. CB9615]
 gi|293404143|ref|ZP_06648137.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           FVEC1412]
 gi|293414116|ref|ZP_06656765.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           B185]
 gi|298379925|ref|ZP_06989530.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           FVEC1302]
 gi|331662200|ref|ZP_08363123.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli TA143]
 gi|331667211|ref|ZP_08368076.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli TA271]
 gi|170519513|gb|ACB17691.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli SMS-3-5]
 gi|187768212|gb|EDU32056.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188015679|gb|EDU53801.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4113]
 gi|189002710|gb|EDU71696.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189356271|gb|EDU74690.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189363476|gb|EDU81895.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189366544|gb|EDU84960.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4501]
 gi|189373161|gb|EDU91577.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC869]
 gi|189377784|gb|EDU96200.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC508]
 gi|190903818|gb|EDV63533.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B7A]
 gi|190905961|gb|EDV65577.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli F11]
 gi|192928940|gb|EDV82553.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E22]
 gi|192957358|gb|EDV87806.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E110019]
 gi|194413712|gb|EDX29991.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B171]
 gi|208731607|gb|EDZ80295.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208737983|gb|EDZ85666.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209161703|gb|ACI39136.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217320349|gb|EEC28773.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. TW14588]
 gi|290761711|gb|ADD55672.1| Penicillin-binding protein 6 [Escherichia coli O55:H7 str. CB9615]
 gi|291428729|gb|EFF01754.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           FVEC1412]
 gi|291434174|gb|EFF07147.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           B185]
 gi|298279623|gb|EFI21131.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           FVEC1302]
 gi|320192682|gb|EFW67323.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320196666|gb|EFW71289.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli WV_060327]
 gi|320199030|gb|EFW73627.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli EC4100B]
 gi|326338272|gb|EGD62101.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           1125]
 gi|326346249|gb|EGD69987.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           1044]
 gi|330910581|gb|EGH39091.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli AA86]
 gi|331060622|gb|EGI32586.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli TA143]
 gi|331065567|gb|EGI37460.1| D-alanyl-D-alanine carboxypeptidase DacC (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6)
           (PBP-6) [Escherichia coli TA271]
          Length = 403

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|229075784|ref|ZP_04208761.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock4-18]
 gi|229098546|ref|ZP_04229487.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-29]
 gi|229117572|ref|ZP_04246944.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock1-3]
 gi|228665892|gb|EEL21362.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock1-3]
 gi|228684868|gb|EEL38805.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-29]
 gi|228707336|gb|EEL59532.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock4-18]
          Length = 385

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 146/325 (44%), Gaps = 8/325 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +     +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  L   
Sbjct: 25  TAPKLAEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLNDK 84

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +  S++A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN
Sbjct: 85  VRASEHAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMN 144

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEI 195
             +K+LGL  THF N  G+    HY+TA DMAI+                +   ++    
Sbjct: 145 KKAKDLGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTD 204

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           K     NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN  
Sbjct: 205 KKFWLVNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQ 264

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMK 311
              LL   F     +K      K    Q    +   +    S+ V    K+  N +   +
Sbjct: 265 VTKLLDYAFGQYMTKKMYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQ 324

Query: 312 EAKDKESHFIDFEKITLLKNKITKK 336
           E   ++      +K   L   + KK
Sbjct: 325 EVIAEKKVKAPIKKGDALGTLVIKK 349


>gi|332091086|gb|EGI96176.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella dysenteriae
           155-74]
          Length = 400

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDARATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DG+KTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGIKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|156934665|ref|YP_001438581.1| D-alanyl-D-alanine carboxypeptidase fraction C [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156532919|gb|ABU77745.1| hypothetical protein ESA_02500 [Cronobacter sakazakii ATCC BAA-894]
          Length = 410

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 154/339 (45%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            ++I+++      P    A       + L+D ++G V+AE   D   +PASLTKLMT+YV
Sbjct: 26  FLLISLSTAHAADPIAPAAPDVDARAWILMDYHSGKVLAEGNADEKLDPASLTKLMTSYV 85

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  L   +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 86  VGQALKAGKIHLDDKVTVGKDAWATGNPALRGSSLMFLKPGDQVSVADLNKGVIIQSGND 145

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++AIA+ +  ++  FV  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 146 ASIAIADYVAGSQDAFVSLMNGYAKRLGLTNTTFKTVHGLDAPGQFSTARDMALLGKALI 205

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     + +  DGMKTG T  +G+N+VASA QGD 
Sbjct: 206 HDVPDEYAIHKEKEFTFNKIRQPNRNRLLWSSSMNVDGMKTGTTAGAGYNLVASATQGDM 265

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNIS 293
            LI+V+LGA     R + S  LL+ GF        I        +  +  + S       
Sbjct: 266 RLISVVLGAKTDGIRFRESEKLLTWGFRFFETVTPIKPDAAFVNQRVWFGDSSEVKLGAG 325

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E    T  +    N +     +        ++  ++   
Sbjct: 326 EAGSVTIPKGQLKNLKATYTLNSPQLTAPLKQGQVVGTI 364


>gi|297544591|ref|YP_003676893.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296842366|gb|ADH60882.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 381

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 155/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIF-----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M + ++ + ++M+  I         +     K     L++ NTG ++ E     P  PAS
Sbjct: 1   MSKKILTLLVSMIIAISFILDVTVYADTLNLKAKSAILMEANTGQILYEKDSHKPLPPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + S
Sbjct: 61  VTKVMTLLLAIEAIDSGKIKITDKVVTSKHAFDMGGTQIYLEIGEEMTVDDLMKAIAMNS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND +VA+AE +  TE+ FV+ MN  +K LG   T F NA G+   GH T+  D+A++S 
Sbjct: 121 ANDASVALAEYIAGTEENFVEIMNKRAKELGAKNTTFKNATGLPDEGHLTSVYDIAMISR 180

Query: 176 RIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +   +        ++  L        NTN  +  + G DG+KTG T  + + + A+A +
Sbjct: 181 ELVKHESIFKYLTNKLDSLRNGKFSLINTNKLLWRYKGVDGIKTGSTSEALYCMAATAKR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPN 291
            D  LIAV+ GA D  TR   +A LL  GF N    K  +           +     V  
Sbjct: 241 ADTRLIAVVFGAPDSETRFSETAKLLDYGFANYESVKIASKGQSFGNVKVLKGKKETVSG 300

Query: 292 I---SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +    E +   + E  N  T+++      +       I  +K     K
Sbjct: 301 VCHDDEYILIKKGEGKNIKTEVELKNAVLAPLAKEVPIGTVKITQDGK 348


>gi|91209873|ref|YP_539859.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           UTI89]
 gi|117623019|ref|YP_851932.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           APEC O1]
 gi|237707198|ref|ZP_04537679.1| penicillin-binding protein 6 [Escherichia sp. 3_2_53FAA]
 gi|91071447|gb|ABE06328.1| penicillin-binding protein 6 precursor [Escherichia coli UTI89]
 gi|115512143|gb|ABJ00218.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a)
           [Escherichia coli APEC O1]
 gi|226898408|gb|EEH84667.1| penicillin-binding protein 6 [Escherichia sp. 3_2_53FAA]
 gi|315287329|gb|EFU46740.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           110-3]
 gi|323953500|gb|EGB49366.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H252]
 gi|323958128|gb|EGB53837.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H263]
          Length = 407

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 98/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 324 AGSVTIPRGQLKNLKASYTLMEPQLTAPLKKGQVVGTI 361


>gi|89899727|ref|YP_522198.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodoferax ferrireducens
           T118]
 gi|89344464|gb|ABD68667.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Rhodoferax ferrireducens T118]
          Length = 414

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 4/325 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+                + L+D ++G V+A   PD P  PASLTK+MT+Y+V   L+  
Sbjct: 52  LAAQTTLAGSPPALPAKAWLLMDFDSGEVLASANPDEPLPPASLTKMMTSYLVEQALRSG 111

Query: 73  KAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K   T  +++S+NA        S       S  T+ + L+ +I++S ND + AIAE +  
Sbjct: 112 KLKQTDLVSVSQNAWCRGSSTESCMYLPLNSQATVIDILRGIIIQSGNDASKAIAEHMAG 171

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E+ F + MN  +  LG++ THF+N  G+    H ++ARD+AIL+  I  D   Y   + 
Sbjct: 172 SEEGFAKLMNAEALRLGMTHTHFVNPTGLPDPAHKSSARDLAILARAIIHDSVDYYPIYA 231

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +  +  G K  N N  + T    DG+KTG T  +G+ +V S+ +    LI VIL     
Sbjct: 232 EREFKYNGIKQGNRNALLYTDPTVDGLKTGHTEDAGYCLVTSSKRNGMRLITVILNTHSA 291

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             R   + +LL  GF +      I         +    +   ++  +       +    Q
Sbjct: 292 QARADETRTLLGWGFSSFEKATPIQPNTVVTTAKVSFGKADTVAAGLGAPWMLTVPRGQQ 351

Query: 310 MKE-AKDKESHFIDFEKITLLKNKI 333
           ++   + K        K +++   +
Sbjct: 352 VQTSVELKSGLEAPVTKGSVIGKVV 376


>gi|89895051|ref|YP_518538.1| hypothetical protein DSY2305 [Desulfitobacterium hafniense Y51]
 gi|219669462|ref|YP_002459897.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
 gi|89334499|dbj|BAE84094.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539722|gb|ACL21461.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
          Length = 380

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 145/341 (42%), Gaps = 12/341 (3%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+     F + + +  L+            +     L+D  +G ++ E        PAS
Sbjct: 1   MRKTLSWVFALALFIGNLAVPHQAYGAVLETEAASAILMDAKSGQILFEKEIHKELPPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TKLMT  V    ++  +  LT  +T S+ AS    S    + G T +L+  L  + V S
Sbjct: 61  VTKLMTLLVAAEAVESGRVSLTDKVTASEGASSLGGSQIYLEPGETFSLEEMLISIAVGS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND   A+ E +  T + FV+ MN  +K +G + THF+NA+G+   GHYT+A D+A++  
Sbjct: 121 ANDACYAVGEHISGTHEAFVEEMNKKAKEIGANHTHFVNAYGLPAQGHYTSAYDLALMGR 180

Query: 176 RIKTDF-PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                   + +   +   L     K  NTN  +  + GADG KTG+T  + + + ++  +
Sbjct: 181 EALKYPLVRKLTNMKEYDLRGGKFKLWNTNKLLWWYEGADGFKTGWTSEANYCLASTVER 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN------E 288
               LIAV++G          S  L + GF N   ++      K    +           
Sbjct: 241 DGLRLIAVVMGVPQVRGHFTESMKLYNYGFANYAYKEYAPVGQKQGVIKVRKGMEEDLVA 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   +  V   +    N   + K   D E+     +K+  +
Sbjct: 301 VTEKALGVTVPKGSDKNIWAETKLNPDVEAPVKAGQKVGEI 341


>gi|260773924|ref|ZP_05882839.1| D-alanyl-D-alanine carboxypeptidase [Vibrio metschnikovii CIP
           69.14]
 gi|260610885|gb|EEX36089.1| D-alanyl-D-alanine carboxypeptidase [Vibrio metschnikovii CIP
           69.14]
          Length = 388

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 144/351 (41%), Gaps = 17/351 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+    I+  A   +  P +                  Y L+D +TG V+ E+   +  N
Sbjct: 1   MKNIKSIVVSATCLSFIPLVSDATPIVVPNPPQLSAKGYVLMDYHTGTVLVEHNAHNKLN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALK 109
           PASLTKLMT+YV    +K         + IS+ A        S    + G+ + + +  +
Sbjct: 61  PASLTKLMTSYVAGQEMKRGNISPDDQVVISQRAWARNFPDSSKMFIEVGTKVNMMDLYR 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            LIV+S ND +VAIAE +  +E  FV  MN+ +  LGL+ T F N HG+   G Y+T  D
Sbjct: 121 GLIVQSGNDASVAIAEHVAGSENAFVDLMNSWAATLGLTNTAFTNPHGLDSSGLYSTPYD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNI 228
           +A L+  I  D P+    +        G    N N       +  DGMKTGFT  +GF++
Sbjct: 181 IAKLAQAIIRDLPEIYPLYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGFTSGAGFSL 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQN 284
             SA  G+  LI+V++G+     R   S  LLS GF                    +   
Sbjct: 241 TTSATNGNMRLISVVMGSNSAKGREADSKQLLSYGFRFFETIAPHQAGEPIEQARVWMGK 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                  ++E    T  +            +K       +K  ++   I +
Sbjct: 301 KDQLPVGVAETTYLTVVKGELPKLSGLIEMNK-DLQAPIQKGDIVGKVIYQ 350


>gi|254516725|ref|ZP_05128784.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [gamma proteobacterium NOR5-3]
 gi|219675148|gb|EED31515.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [gamma proteobacterium NOR5-3]
          Length = 379

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 10/337 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +   +  S     +          Y L+D N+G V+ E+  D    PASLTKLMTA+V+ 
Sbjct: 3   LATFSGASTAQNIVPAPPAVAARAYLLVDANSGAVLVESNADEQLPPASLTKLMTAFVLA 62

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAV 121
           S +   +      +T+S+NA    P          +    +T+    + +++ S ND  V
Sbjct: 63  SEIDAGRLSRDDQVTVSRNAWSQNPVFNGSSLMWIEPRMPVTIGQLEQGIVISSGNDATV 122

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  +E  F   MN  +  LG+  ++F N+HG+    H  TARD+A L+  I T F
Sbjct: 123 AVAEHIAGSETAFADLMNKHAAELGMHGSYFANSHGLPHPQHLMTARDLATLAKAIITRF 182

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P++   +  +       +  N N  +G     DG+KTG+T  +G+ +VASA +    LI+
Sbjct: 183 PEHYKVYSQREYTYNDIRQYNRNKLLGEDPSVDGLKTGYTREAGYGLVASAERNGMRLIS 242

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKD-FYQQNLSNEVPNISEEVC 297
           V++G      R + + SLL+ GF        +     + K   ++         I+++V 
Sbjct: 243 VVMGTESTRARARETRSLLNYGFRFYETDVMVAGAEELEKPRVWKGQADYVSVGIADDVV 302

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            T       +   +     +       +   +     
Sbjct: 303 LTLPRGKRNSLVTELVLM-DPISAPLAQGDAVGELTL 338


>gi|312135356|ref|YP_004002694.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           owensensis OL]
 gi|311775407|gb|ADQ04894.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           owensensis OL]
          Length = 384

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 6/313 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D +TG ++ E        PAS+TK+MT  ++   +++ +  L+  +  S+
Sbjct: 36  EISAKSAILVDFDTGKILYEKNSHEKLPPASITKIMTMILICEAIEKGRIKLSDKVIASQ 95

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NAS    S    K+   MT++  LK + + SAND  VA+AE +  + ++FV  MN  +K 
Sbjct: 96  NASSLGGSQIYLKENEEMTVEELLKSIAIASANDACVALAEHIAGSVQEFVYIMNKKAKE 155

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNT 203
           LG+  T+F+N +G+    HYT+A D+AI+S  +      +      +  +        NT
Sbjct: 156 LGMLDTNFVNPYGLDAENHYTSAYDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNT 215

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  V  + G  G+KTG T  + F + ASA++    LIAVI+GA D  TR   +  LL  G
Sbjct: 216 NKLVRFYKGCTGVKTGSTDKAKFCVSASALRNGLHLIAVIMGAPDSKTRFNDAVKLLDWG 275

Query: 264 FYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           F N +     +                     +S ++    K+      + K    ++  
Sbjct: 276 FANFSMYSPYSKGFCFGKVKVRNGIEKEVEVILSTDIKLLVKKGDESTVESKVTLPQQ-I 334

Query: 320 FIDFEKITLLKNK 332
               +    +   
Sbjct: 335 SAPVKTGQKIGRL 347


>gi|229104683|ref|ZP_04235345.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-28]
 gi|228678747|gb|EEL32962.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-28]
          Length = 385

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 146/325 (44%), Gaps = 8/325 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +     +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  L   
Sbjct: 25  TAPKLAEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLNDK 84

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +  S++A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN
Sbjct: 85  VRASEHAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMN 144

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEI 195
             +K+LGL  THF N  G+    HY+TA DMAI+                +   ++    
Sbjct: 145 KKAKDLGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTD 204

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           K     NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN  
Sbjct: 205 KKFWLVNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQ 264

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMK 311
              LL   F     +K      K    Q    +   +    S+ V    K+  N +   +
Sbjct: 265 VTKLLDYAFGQYMTKKMYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQ 324

Query: 312 EAKDKESHFIDFEKITLLKNKITKK 336
           E   ++      +K   L   + KK
Sbjct: 325 EVIAEKKVKAPIKKGDALGTLVIKK 349


>gi|29654563|ref|NP_820255.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           RSA 493]
 gi|154706869|ref|YP_001424698.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           Dugway 5J108-111]
 gi|161830325|ref|YP_001597113.1| D-alanyl-D-alanine carboxypeptidase [Coxiella burnetii RSA 331]
 gi|29541831|gb|AAO90769.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           RSA 493]
 gi|154356155|gb|ABS77617.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762192|gb|ABX77834.1| D-alanyl-D-alanine carboxypeptidase [Coxiella burnetii RSA 331]
          Length = 418

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 4/312 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
              +  Y L+D ++G VIA+        PASLTKLMT YV F  LK  +  L     +S 
Sbjct: 62  NLDVKGYVLMDADSGIVIAQKNMTQRLQPASLTKLMTLYVTFQALKSAQIHLDDKAKVSV 121

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K+G+ + ++  ++ +IV S ND  V +A+ +  TE  F Q MN T+  
Sbjct: 122 KAWRTGGSRMFLKEGAEVPVNLLIQGIIVASGNDACVTMAQYIGGTEPSFAQMMNQTAAR 181

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  +H++++ G+ +  HY+T  DMA+L+  I  DFP+Y HYF  K L     K PN N
Sbjct: 182 LGMKNSHYVDSTGLPRPDHYSTPYDMAVLTRAIINDFPEYYHYFSQKWLTYNNIKQPNRN 241

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +     ADG+KTG T  +G+ ++ASA + +  LI+V++GA   + R   S +LL+ GF
Sbjct: 242 RLLWRDGSADGLKTGHTEEAGYCLIASAKRNNMRLISVVMGAPTDSERADDSEALLNYGF 301

Query: 265 YNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                R+  +       K  +     +    +++ +  T     + N +   +   +   
Sbjct: 302 RFYQTRQLFDANTSITKKRIWMGKRKHAEFGLTQPLYVTLPVGEDKNLKATMSFAIQHLQ 361

Query: 321 IDFEKITLLKNK 332
               K       
Sbjct: 362 APILKGQSYGEI 373


>gi|229192288|ref|ZP_04319253.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus ATCC 10876]
 gi|228591238|gb|EEK49092.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus ATCC 10876]
          Length = 385

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 146/318 (45%), Gaps = 8/318 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S++A
Sbjct: 32  QASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASEHA 91

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+LG
Sbjct: 92  ASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKDLG 151

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           L  THF N  G+    HY+TA DMAI+                +   ++    K     N
Sbjct: 152 LKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWLVN 211

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL  
Sbjct: 212 TNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRIISVVMGAPTSKERNNQVTKLLDY 271

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKES 318
            F     +K      K    Q    +   +    S+ V    K+  N +   +E   ++ 
Sbjct: 272 AFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAEKK 331

Query: 319 HFIDFEKITLLKNKITKK 336
                +K   L   + KK
Sbjct: 332 VKAPIKKGDALGTLVIKK 349


>gi|308048532|ref|YP_003912098.1| penicillin-binding protein 6 [Ferrimonas balearica DSM 9799]
 gi|307630722|gb|ADN75024.1| penicillin-binding protein 6 [Ferrimonas balearica DSM 9799]
          Length = 387

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 102/336 (30%), Positives = 147/336 (43%), Gaps = 13/336 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++  A ++     +  A T     Y L+D  TG V+AEN       PASLTK+MT+YV+ 
Sbjct: 14  VLMSASVTAAPSVIPNAPTVAAGSYVLMDFKTGRVLAENNAYEQRAPASLTKMMTSYVLG 73

Query: 67  SFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             L       T  + IS NA        S    + G  + L +  + ++V+S ND  VAI
Sbjct: 74  QELNRGNVRETDMVKISNNAWAKNFPGSSVMWIEVGKEVNLMDLYRGMVVQSGNDACVAI 133

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  TE  +   MN  S  LG++ THF NAHG+      TTA DMAIL   I  D PQ
Sbjct: 134 AEHVAGTESAYTDLMNAWSGQLGMADTHFANAHGLDATDQVTTAYDMAILGRAIIRDIPQ 193

Query: 184 YMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           Y   + +K     G +  N N       L  DGMKTG T  +G+N+V+SA +GD  LIAV
Sbjct: 194 YYPLYSLKEFTFNGIRQHNRNGLLWDRSLNVDGMKTGHTNGAGYNLVSSATKGDMRLIAV 253

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEV 296
           ++GA    +R   S  LL+ GF             +   Q+    +   +         V
Sbjct: 254 VMGAKSPQSREAESKKLLNYGFRFFETVTPYKAGDEFTSQKIWYGDKSEVRLGVLEDTPV 313

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + +  N        +  E       +  ++   
Sbjct: 314 TIYRGQSDNLKAN---FELSEELKAPLSRGDVVGTV 346


>gi|167040194|ref|YP_001663179.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X514]
 gi|256752060|ref|ZP_05492928.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300914278|ref|ZP_07131594.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X561]
 gi|307724486|ref|YP_003904237.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X513]
 gi|166854434|gb|ABY92843.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X514]
 gi|256749070|gb|EEU62106.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889213|gb|EFK84359.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X561]
 gi|307581547|gb|ADN54946.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X513]
          Length = 381

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 97/350 (27%), Positives = 160/350 (45%), Gaps = 15/350 (4%)

Query: 2   RQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ L ++   +L+  F       +     K     L++TNTG ++ E     P  PAS+T
Sbjct: 3   KRLLTLLVSVILAISFVLNGTVYADTLNLKSKSAILIETNTGQILYEKDSHKPLPPASVT 62

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    +   K  +T  +  SK+A +   +    + G  MT+D+ +K + + SAN
Sbjct: 63  KVMTLLLAIEAIDSGKIKITDKVVTSKHAFDMGGTQIYLEVGEEMTVDDLMKAIAMNSAN 122

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  TE+ FV+ MN  +K LG   T F NA G+ + GH T+  D+A++S  +
Sbjct: 123 DASVALAEYIAGTEENFVEMMNKRAKELGAKNTTFKNATGLPEEGHLTSVYDIAMISREL 182

Query: 178 K-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              +        ++  L        NTN  +  + G DG+KTG T  + + + A+A +GD
Sbjct: 183 VKHESIFKYLTNKLDSLRNGKFSLINTNKLLWRYKGVDGIKTGSTSEALYCMAATAKRGD 242

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNI- 292
             LIAV+ GA D  TR   +A LL  GF N    K  +           +     V  + 
Sbjct: 243 TRLIAVVFGAPDSETRFSEAAKLLDYGFANYESVKVASKGQSFGNVKVLKGKREAVSVVC 302

Query: 293 --SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN----KITKK 336
              E +   + E  N  T+++      +       I  +K     K+ KK
Sbjct: 303 RDDEYILIKKGEGKNIKTEVELKNAVLAPLAKEVPIGTVKITQDGKVIKK 352


>gi|229019288|ref|ZP_04176114.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH1273]
 gi|229025532|ref|ZP_04181942.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH1272]
 gi|228735814|gb|EEL86399.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH1272]
 gi|228741973|gb|EEL92147.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH1273]
          Length = 385

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K       +          S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKEEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|229031719|ref|ZP_04187712.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH1271]
 gi|229071580|ref|ZP_04204798.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus F65185]
 gi|229081333|ref|ZP_04213836.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock4-2]
 gi|229180356|ref|ZP_04307699.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus 172560W]
 gi|228603103|gb|EEK60581.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus 172560W]
 gi|228701955|gb|EEL54438.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock4-2]
 gi|228711516|gb|EEL63473.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus F65185]
 gi|228729603|gb|EEL80590.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH1271]
          Length = 385

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|187730201|ref|YP_001880973.1| D-alanyl-D-alanine carboxypeptidase fraction C [Shigella boydii CDC
           3083-94]
 gi|187427193|gb|ACD06467.1| serine-type D-Ala-D-Ala carboxypeptidase [Shigella boydii CDC
           3083-94]
          Length = 400

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSELNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|164685962|ref|ZP_01946170.2| D-alanyl-D-alanine carboxypeptidase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212218675|ref|YP_002305462.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           CbuK_Q154]
 gi|164601484|gb|EAX33225.2| D-alanyl-D-alanine carboxypeptidase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212012937|gb|ACJ20317.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           CbuK_Q154]
          Length = 418

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 149/312 (47%), Gaps = 4/312 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
              +  Y L+D ++G VIA+        PASLTKLMT YV F  LK  +  L     +S 
Sbjct: 62  NLDVKGYVLMDADSGIVIAQKNMTQRLQPASLTKLMTLYVTFQALKSAQIHLDDKAKVSV 121

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K+G+ + ++  ++ +IV S ND  V +A+ +  TE  F Q MN T+  
Sbjct: 122 KAWRTGGSRMFLKEGAEVPVNLLIQGIIVASGNDACVTMAQYIGGTEPSFAQMMNQTAAR 181

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  +H++++ G+ +  HY+T  DMA L+  I  DFP+Y HYF  K L     K PN N
Sbjct: 182 LGMKNSHYVDSTGLPRPDHYSTPYDMAALTRAIINDFPEYYHYFSQKWLTYNNIKQPNRN 241

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +     ADG+KTG T  +G+ ++ASA + +  LI+V++GA   + R   S +LL+ GF
Sbjct: 242 RLLWRDGSADGLKTGHTEEAGYCLIASAKRNNMRLISVVMGAPTDSERADDSEALLNYGF 301

Query: 265 YNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                R+  +       K  +     +    +++ +  T     + N +   +   +   
Sbjct: 302 RFYQTRQLFDANTSITKKRIWMGKRKHAEFGLTQPLYVTLPVGEDKNLKATMSFAIQHLQ 361

Query: 321 IDFEKITLLKNK 332
               K       
Sbjct: 362 APILKGQSYGEI 373


>gi|82776165|ref|YP_402512.1| D-alanyl-D-alanine carboxypeptidase fraction C [Shigella
           dysenteriae Sd197]
 gi|81240313|gb|ABB61023.1| D-alanyl-D-alanine carboxypeptidase [Shigella dysenteriae Sd197]
          Length = 400

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWVTGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       +
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLAWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGK 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|304397023|ref|ZP_07378902.1| Beta-lactamase [Pantoea sp. aB]
 gi|304355172|gb|EFM19540.1| Beta-lactamase [Pantoea sp. aB]
          Length = 420

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +A +S        A       + L+D  +G V+ E+  D   +PASLTK+MT+YVV 
Sbjct: 38  LLILAPISVFAEQAPAAPGIDAKAWILIDYASGKVLTESSADQRLDPASLTKMMTSYVVG 97

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+ ++A                K G  + +    K ++++S ND  
Sbjct: 98  QAIKAGKIKPDDLVTVGQDAWATGNPKLRGSSLMFLKPGDRIPVHELNKGIVIQSGNDAC 157

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  F+  MNN  K LGL  THFM  HG+   G Y+TARDMA+++  +  D
Sbjct: 158 IALADYVAGSQDSFIGLMNNYVKALGLQNTHFMTVHGLDAEGQYSTARDMALIAQALIRD 217

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+     + K       +  N N     T L  DG+KTG T  +G N+VASA +GD  L
Sbjct: 218 VPEEYALNKEKEFTFNNIRQINRNRLLWSTNLKVDGVKTGHTSGAGNNLVASATEGDMRL 277

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE 295
           I+V+LG      R + S  LL+ GF        I        +  +  + S     ++++
Sbjct: 278 ISVVLGTASDAIRFRESEKLLTWGFRFFETVTPIKADAPFAQQRVWFGDKSQVNLGVAKD 337

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +     +        +K  ++   
Sbjct: 338 AALTIPKGQMKNLKASFKLNAPQLEAPLKKNQVVGTI 374


>gi|332527505|ref|ZP_08403557.1| serine-type D-Ala-D-Ala carboxypeptidase [Rubrivivax
           benzoatilyticus JA2]
 gi|332111912|gb|EGJ11890.1| serine-type D-Ala-D-Ala carboxypeptidase [Rubrivivax
           benzoatilyticus JA2]
          Length = 381

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 13/343 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L +     ++       +        Y L+D +   V+AE   D P +PASLTKLM
Sbjct: 1   MKRLLSLALAFFVAGAHAQAPVPPEVAARQYILIDVSANQVLAERDADTPADPASLTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITIS---KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           +AY+VF+ +++ K  L   + +S    +  +Y  S           +D  L+ +IV+S N
Sbjct: 61  SAYLVFNAVRDGKLALDQRVPVSTRAWDERKYGGSLMFIDTRMQPRVDELLRGMIVQSGN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+AE++  T + FV  MN  ++  GL  T F N  G+ + GH TT R++A ++ RI
Sbjct: 121 DATVALAEAVGGTVENFVAMMNKQAQAWGLKNTQFRNPSGLTEAGHKTTPREIAYIATRI 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-- 235
             D PQ+   +  +       +  N N  +G     DGMKTG+T A+G+ +VASA +   
Sbjct: 181 IQDHPQFYPIYSERAFAFNNIRQDNRNLLLGRDPSVDGMKTGYTEAAGYCLVASAQRDMP 240

Query: 236 --DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEV 289
              + L++V++G      R   S  LL+ G+      +  +          ++ N S   
Sbjct: 241 NGKRRLLSVVMGTASMQARANESQKLLNWGYAAWDAIRLFDAGKAVATVPVWKGNKSEAR 300

Query: 290 PNI--SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                +  V   + E     T ++      +     +++  LK
Sbjct: 301 LGAPGAIFVAVPRGEGDKLKTSIQRTDPLVAPLQQGQRVGTLK 343


>gi|154686590|ref|YP_001421751.1| DacF [Bacillus amyloliquefaciens FZB42]
 gi|63146679|emb|CAG28930.1| penicillin binding protein [Bacillus amyloliquefaciens FZB42]
 gi|154352441|gb|ABS74520.1| DacF [Bacillus amyloliquefaciens FZB42]
          Length = 389

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 151/353 (42%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---------KLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +  + + +L       + A+ +         +     L++ +TG ++         
Sbjct: 1   MKRLISTLLIGILLTASAPSAFAKPDGKHTSELAHEAKSAVLIERDTGSILYNKNSRERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L + K  ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDKGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E+ FV  MN  +K LGL  T F N  G+ +  HY++A DMA
Sbjct: 121 AIASGNDASVAMAEYIAGSEEDFVSRMNKKAKELGLKDTSFKNPTGLPEKDHYSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
            ++  +            +   ++    K     NTN  +  + G DG+KTGFT  + + 
Sbjct: 181 KMAKELLKYDKITQFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGFTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQ 283
           + A+A +G+  +IAV+ GA     RN     +L   F                     + 
Sbjct: 241 LTATAKKGNMRVIAVVFGASTPKERNAQVTKMLDYAFSQFKTHPLYKRDQIVGTVKVKKG 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                    SE +    K+  N +   KE K   +     +K  +L + + KK
Sbjct: 301 KQKLIKLTTSEPISLLAKKGENMDKVKKEVKINGNVTAPVKKGEVLGSLVLKK 353


>gi|229140812|ref|ZP_04269357.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-ST26]
 gi|228642602|gb|EEK98888.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-ST26]
          Length = 385

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|190575883|ref|YP_001973728.1| putative penicillin-binding protein [Stenotrophomonas maltophilia
           K279a]
 gi|190013805|emb|CAQ47442.1| putative penicillin-binding protein precursor [Stenotrophomonas
           maltophilia K279a]
          Length = 404

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 90/320 (28%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YV+ + +K  K      + +S+ A 
Sbjct: 52  SKAWVLMDYATGQVLAGENIHEQLAPASITKVMTSYVIAAEVKNGKVRADDQVMMSERAW 111

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 112 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 171

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  +HF+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K PN
Sbjct: 172 AKIGMKDSHFVNAHGLTAEGHHSTAYDLALLGRAMVRDYPETYAYNKIKEFQVGNIKQPN 231

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV+LG      R   S +LL+ 
Sbjct: 232 RNLLLWRDGSVDGIKTGHTSEAGYCLMSSAQRGDQRLIAVVLGGASEKQRADDSLALLNW 291

Query: 263 GFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF      +             ++         +++   V   +    +    +   K  
Sbjct: 292 GFRFFETHRLYEPGKAVAEHKVWKGTTDKVQLGVAQPMLVSVPRGRYNDLKPSIDVPKTL 351

Query: 317 ESHFIDFEKITLLKNKITKK 336
           E+ F   ++I  +K  +  K
Sbjct: 352 EAPFTAGQQIGTVKVTLDGK 371


>gi|197284564|ref|YP_002150436.1| penicillin-binding protein [Proteus mirabilis HI4320]
 gi|194682051|emb|CAR41559.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
           [Proteus mirabilis HI4320]
          Length = 400

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +           +    +   Y L+D N+G ++A   P+   +PASLTK+M++YVV 
Sbjct: 18  LLLIISSPTFAVNNPVPPQIEAKSYVLMDYNSGKILASEKPEERLDPASLTKIMSSYVVG 77

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +KE +      + + +NA                K G  + + +  + ++++S ND +
Sbjct: 78  QAIKEGRMSPDDIVIVGRNAWATGNPVLKGSSLMFLKPGDRVKVIDLNRGMVIQSGNDAS 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE +  +++ FV  MN  + NLGL  THF   HG+   G YTTA+DMA+L+  +  D
Sbjct: 138 IALAEHVAGSQETFVDLMNTYAANLGLKNTHFKTVHGLDSEGQYTTAQDMALLTAAMIRD 197

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P      + K       + PN N       +  DG+KTG T  +G+N+V+SA +G+  L
Sbjct: 198 VPSEYDIHKEKEFTFNNIRQPNRNRLLWNKNMNVDGVKTGHTNGAGYNLVSSATEGNMRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE 295
           IAV+LGA     R   S  LL  GF        +        +  +  +       ++++
Sbjct: 258 IAVVLGAPSDKVRFAESERLLGWGFRFFETVTPVKENVPLTTQKVWYGDKGEVALGVAKD 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +               +  ++   
Sbjct: 318 ASITIPKGELKNLKASFTLTNPELEAPLTQNQVVGTV 354


>gi|229198199|ref|ZP_04324908.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus m1293]
 gi|228585359|gb|EEK43468.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus m1293]
          Length = 385

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|41218|emb|CAA29775.1| unnamed protein product [Escherichia coli K-12]
          Length = 400

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNEDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 354


>gi|54310018|ref|YP_131038.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum SS9]
 gi|46914457|emb|CAG21236.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum SS9]
          Length = 391

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 19/350 (5%)

Query: 1   MRQ----FLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++    F  IIA A++       +I              Y L+D N+G +IAEN  D  
Sbjct: 1   MKKSAATFQTIIASALMLTSASAAAIPTVVPEAPQIAAKAYILMDYNSGKIIAENNSDEK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNA 107
            +PASLTK++T+YV+   +K     L   +++S NA        S    + G  +T+   
Sbjct: 61  LHPASLTKMLTSYVIGQEIKSGNISLDDKVSVSNNAWAKNFPGSSKMFLEPGKLVTVQEL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            K +I++S ND   A+AE +  +   FV+ MN  +K +G+ ++HF+N HG+    H++TA
Sbjct: 121 NKGIIIQSGNDACTAMAEHIAGSTGSFVELMNAWAKRIGMESSHFVNVHGLDNDDHFSTA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGF 226
            DMA L+  +  D P     ++ K     G    N N       L  DGMKTG T  +G+
Sbjct: 181 HDMATLAQAVIRDVPDEYAIYKEKSFTYNGITQYNRNGLLWDKSLNVDGMKTGHTDQAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQ 282
           ++VASA +G   LI+V++G    N R   S  LL+ GF               + +  + 
Sbjct: 241 SLVASAYEGKMRLISVVMGTKSANARKAESKKLLNYGFRFFETVTPHKANETFVTEKVWM 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            ++      ++E+   T       + +     +KE       K  ++   
Sbjct: 301 GDIDQVNLGVTEDTFVTLPRGQTKDLKASFVLEKE-LKAPIAKGDVVGKL 349


>gi|308186205|ref|YP_003930336.1| D-alanyl-D-alanine carboxypeptidase [Pantoea vagans C9-1]
 gi|308056715|gb|ADO08887.1| D-alanyl-D-alanine carboxypeptidase [Pantoea vagans C9-1]
          Length = 400

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +A +S        A       + L+D  +G V+ E+  D   +PASLTK+MT+YVV 
Sbjct: 18  LLILAPISVFAEQAPAAPGIDAKAWILIDYASGKVLTESSADQRLDPASLTKMMTSYVVG 77

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+ ++A                K G  + +    K ++++S ND  
Sbjct: 78  QAIKAGKIKPDDLVTVGQDAWATGNPKLRGSSLMFLKPGDRIPVHELNKGIVIQSGNDAC 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  F+  MNN  K LGL  THFM  HG+   G Y+TARDMA+++  +  D
Sbjct: 138 IALADYVAGSQDSFIGLMNNYVKALGLQNTHFMTVHGLDAEGQYSTARDMALIAQALIRD 197

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+     + K       +  N N     T L  DG+KTG T  +G N+VASA +GD  L
Sbjct: 198 VPEEYALNKEKEFTFNKIRQINRNRLLWSTNLKVDGVKTGHTSGAGNNLVASATEGDMRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE 295
           I+V+LG      R + S  LL+ GF        I        +  +  + S     ++++
Sbjct: 258 ISVVLGTASDAIRFRESEKLLTWGFRFFETVTPIKADAPFAQQRVWFGDKSQVNLGVAKD 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +     +        +K  ++   
Sbjct: 318 AALTIPKGQMKNLKASFKLNAPQLEAPLKKNQVVGTI 354


>gi|212212357|ref|YP_002303293.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           CbuG_Q212]
 gi|212010767|gb|ACJ18148.1| D-alanyl-D-alanine serine-type carboxypeptidase [Coxiella burnetii
           CbuG_Q212]
          Length = 418

 Score =  212 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 4/312 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
              +  Y L+D ++G VIA+        PASLTKLMT YV F  LK  +  L     +S 
Sbjct: 62  NLDVKGYVLMDADSGIVIAQKNMTQRLQPASLTKLMTLYVTFQALKSAQIHLDDKAKVSI 121

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K+G+ + ++  ++ +IV S ND  V +A+ +  TE  F Q MN T+  
Sbjct: 122 KAWRTGGSRMFLKEGAEVPVNLLIQGIIVASGNDACVTMAQYIGGTEPSFAQMMNQTAAR 181

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  +H++++ G+ +  HY+T  DMA+L+  I  DFP+Y HYF  K L     K PN N
Sbjct: 182 LGMKNSHYVDSTGLPRPDHYSTPYDMAVLTRAIINDFPEYYHYFSQKWLTYNNIKQPNRN 241

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +     ADG+KTG T  +G+ ++ASA + +  LI+V++GA   + R   S +LL+ GF
Sbjct: 242 RLLWRDGSADGLKTGHTEEAGYCLIASAKRNNMRLISVVMGAPTDSERADDSEALLNYGF 301

Query: 265 YNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                R+  +       K  +     +    +++ +  T     + N +   +   +   
Sbjct: 302 RFYQTRQLFDANTSITKKRIWMGKRKHAEFGLTQPLYVTLPVGEDKNLKATMSFAIQHLQ 361

Query: 321 IDFEKITLLKNK 332
               K       
Sbjct: 362 APILKGQSYGEI 373


>gi|194433152|ref|ZP_03065434.1| serine-type D-Ala-D-Ala carboxypeptidase [Shigella dysenteriae
           1012]
 gi|194418649|gb|EDX34736.1| serine-type D-Ala-D-Ala carboxypeptidase [Shigella dysenteriae
           1012]
          Length = 403

 Score =  212 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 96/338 (28%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 20  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 80  GQALKADKIKLTDMVTVGKDARATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 139

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 140 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 199

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DG+KTG T  +G+N+VASA QGD  
Sbjct: 200 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGIKTGTTAGAGYNLVASATQGDMR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 260 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 319

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 320 AGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI 357


>gi|157692847|ref|YP_001487309.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
 gi|157681605|gb|ABV62749.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
          Length = 400

 Score =  212 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 93/357 (26%), Positives = 156/357 (43%), Gaps = 22/357 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE--------------TNKLPYYTLLDTNTGHVIAENYP 47
           R    +  + +L ++    +IA+               ++     L++ +TG V+     
Sbjct: 8   RHICALFTLMILISMVSPSAIAKEKIEKPEEKQTSELAHEAKSAILIERDTGKVLYNKNS 67

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D    PAS+TK+MT  ++   + + K  +T  +  S +A+    S    + G  MT+   
Sbjct: 68  DEKLAPASMTKIMTMLLIMEAIDQGKLKMTDKVRTSDHAASMGGSQIFLEPGEEMTVKEM 127

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + S ND +VA+AE +  +E++FV+ MN  +K LGL++T F N  G+ +  HY+TA
Sbjct: 128 LKGIAIASGNDASVAMAEHIAGSEEQFVEQMNKKAKELGLTSTVFQNPTGLPEKDHYSTA 187

Query: 168 RDMAILSWRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            DMA ++  +            +   ++    K     NTN  +  + G DG+KTGFT  
Sbjct: 188 HDMAKMAKELLKYEQITKFTGVYEDYLRQNTDKKFWLVNTNRLIKFYPGVDGLKTGFTGE 247

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           + + + ASA +G+  +IAV+ GA     RN     +L   F   T              +
Sbjct: 248 AKYCLTASAKKGNMRVIAVVFGASTPKDRNAQVVKMLDYAFSQYTTHPLYKRGQDVAEIK 307

Query: 284 NLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   I    SE +    K+  N +   KE K  +     F K T L   + KK
Sbjct: 308 VSKGTKKKIQLVTSEPISLLTKKGENVDQIKKEIKLSQDVTAPFSKGTELGTIVLKK 364


>gi|229061749|ref|ZP_04199082.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH603]
 gi|229168820|ref|ZP_04296539.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH621]
 gi|228614668|gb|EEK71774.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH621]
 gi|228717495|gb|EEL69159.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH603]
          Length = 385

 Score =  212 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 144/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K       +          S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKEEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + K+
Sbjct: 330 KKVKAPIKKGDALGTLVIKR 349


>gi|229013286|ref|ZP_04170427.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus mycoides DSM 2048]
 gi|229134885|ref|ZP_04263692.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-ST196]
 gi|228648560|gb|EEL04588.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus BDRD-ST196]
 gi|228748053|gb|EEL97917.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus mycoides DSM 2048]
          Length = 385

 Score =  212 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 85/320 (26%), Positives = 143/320 (44%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  L   +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLNDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMAKELMKYPLIRKYTGKYEDYLRENTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K       +          S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKEEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + K+
Sbjct: 330 KKVKAPIKKGDALGTLVIKR 349


>gi|229093134|ref|ZP_04224256.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-42]
 gi|228690283|gb|EEL44076.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus Rock3-42]
          Length = 385

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|302871646|ref|YP_003840282.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574505|gb|ADL42296.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 386

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 83/313 (26%), Positives = 139/313 (44%), Gaps = 6/313 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D +TG ++ E        PAS+TK+MT  ++   +++ +  L+  +  S+
Sbjct: 38  EISAKSAILVDFDTGKILYEKNSHEKLPPASITKIMTMILICEAIEKGRIKLSDKVVASQ 97

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NAS    S    K+   MT++  LK + + SAND  VA+AE +  + ++FV  MN  +K 
Sbjct: 98  NASSLGGSQVYLKENEEMTVEELLKSIAIASANDACVALAEHIAGSVQEFVYMMNKKAKE 157

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNT 203
           LG+  T+F+N +G+    HYT+A D+AI+S  +      +      +  +        NT
Sbjct: 158 LGMLDTNFVNPYGLDAENHYTSAYDVAIMSRELLKHKIIRKYLTTWVDTIREGKFGLTNT 217

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  V  + G  G+KTG T  + F I ASA++    LIAVI+GA D  TR   +  +L  G
Sbjct: 218 NKLVRFYRGCTGVKTGSTDKAKFCISASALRNGLHLIAVIMGAPDSKTRFNDATKVLDWG 277

Query: 264 FYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           F N +     +                     +S +V    K+      + K    ++  
Sbjct: 278 FANFSMYSPYSKGFCFGKVKVKNGIEKEVEVILSTDVKLLVKKGDESTVESKVTLPQQ-I 336

Query: 320 FIDFEKITLLKNK 332
               +    +   
Sbjct: 337 SAPVKTGQKIGKL 349


>gi|121997803|ref|YP_001002590.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halorhodospira halophila
           SL1]
 gi|121589208|gb|ABM61788.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Halorhodospira halophila SL1]
          Length = 392

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 24/357 (6%)

Query: 1   MRQFLV------IIAMAMLSNIFP------------FLSIAETNKLPYYTLLDTNTGHVI 42
           MR+ L+      ++ + ++                       +   P + L+D ++G+++
Sbjct: 2   MRRTLLRVLVPALLTVGLIPMAMADERWGTPIVESVPTPSPPSVGAPSHLLVDMHSGYIL 61

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
           A   P+  W PASL K+MTAYVVF  L      L   +T+S+ A     S    + G+ +
Sbjct: 62  AHRDPEESWEPASLAKIMTAYVVFEELASGHIGLEDKVTVSEKAWRSSGSRMFLEVGTEV 121

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+   L+ LIV+S ND AVA+AE +   E+ F Q MN  +  LG+  TH+ NA G+    
Sbjct: 122 TVAELLQGLIVQSGNDAAVALAEHVAGDEETFAQVMNQYASRLGMDNTHYTNATGMPHEQ 181

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             TTA+D A L+  +  DFP++  ++  +  E  G    N N  +      DG+KTG+T 
Sbjct: 182 MRTTAQDTARLARAMIDDFPEFYDWYSQRSFEYAGINQHNRNRLLWRDETVDGLKTGYTS 241

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           ++G+N+V SA +G   LI+V+LG    + R + S  LL+ GF      +  +   +    
Sbjct: 242 SAGYNLVTSAERGGMRLISVVLGTESEDARAQQSLQLLNYGFRFFETHRLYSAGEQLTEA 301

Query: 283 QNLSNEVPNI------SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           +    E  ++      +  V   ++E  N +  +       +      K+  LK ++
Sbjct: 302 RAWMGEGDSVALGIPDNLYVTIPRQEYDNLSASVSVDGQIRAPVEAGAKLGTLKIEL 358


>gi|228929125|ref|ZP_04092152.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228935397|ref|ZP_04098215.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228947796|ref|ZP_04110083.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229123599|ref|ZP_04252794.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus 95/8201]
 gi|229157660|ref|ZP_04285735.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus ATCC 4342]
 gi|228625617|gb|EEK82369.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus ATCC 4342]
 gi|228659734|gb|EEL15379.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus 95/8201]
 gi|228811783|gb|EEM58117.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228824149|gb|EEM69963.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228830415|gb|EEM76025.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
          Length = 385

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|85713001|ref|ZP_01044039.1| D-alanyl-D-alanine carboxypeptidase [Idiomarina baltica OS145]
 gi|85693170|gb|EAQ31130.1| D-alanyl-D-alanine carboxypeptidase [Idiomarina baltica OS145]
          Length = 388

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 9/339 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           LV +    +++    +          Y L+D  TG V+AE   D    PASLTK+MT+Y+
Sbjct: 14  LVAVFSFGVASAQSLVPNPPQVNAKAYILIDHKTGKVLAEGNADESLPPASLTKMMTSYI 73

Query: 65  VFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           +   ++  +   +  +TIS+NA        S    + G+ +++ +    +I+ S ND  V
Sbjct: 74  IGKEIQAGRISNSDMVTISENAWAKNFPESSKMFIEVGTEVSVSDLNHGIIISSGNDACV 133

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  +E  F   MN  ++ +G++++HF N+HG+     Y +ARDM+ L+  +  + 
Sbjct: 134 AMAEYIAGSEGAFADLMNTYAQEVGMTSSHFANSHGLPDPEQYVSARDMSKLASALINET 193

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+    +  K       K  N N       +  DG+KTG T  +G+++V SA+ GD  LI
Sbjct: 194 PEEYKIYSQKSYTYNNIKQYNRNALLWDRSMNVDGIKTGHTSEAGYSLVTSAVDGDTRLI 253

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEV 296
           +V++G      R   S  LL+ GF                 +  +  +       ISE+V
Sbjct: 254 SVVIGTGSEQARKIESKKLLNYGFRYYETVTAYEAGESFVSQRIWGGDKDQVELGISEDV 313

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             T         +     ++E      +K   +     +
Sbjct: 314 VITLPRGQRDKLKANFELNQE-LEAPLQKGEHVGTVYLQ 351


>gi|227356744|ref|ZP_03841129.1| D-alanyl-D-alanine carboxypeptidase [Proteus mirabilis ATCC 29906]
 gi|227163034|gb|EEI47969.1| D-alanyl-D-alanine carboxypeptidase [Proteus mirabilis ATCC 29906]
          Length = 400

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +           +    +   Y L+D N+G ++A   P+   +PASLTK+M++YVV 
Sbjct: 18  LLLIISSPTFAVNNPVPPQIEAKSYVLMDYNSGKILASEKPEERLDPASLTKIMSSYVVG 77

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +KE +      + + +NA                K G  + + +  + ++++S ND +
Sbjct: 78  QAIKEGRMSPDDIVIVGRNAWATGNPVLKGSSLMFLKPGDRVKVIDLNRGMVIQSGNDAS 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE +  +++ FV  MN  + NLGL  THF   HG+   G YTTA+DMA+L+  +  D
Sbjct: 138 IALAEHVAGSQETFVDLMNTYAANLGLKNTHFKTVHGLDSEGQYTTAQDMALLTAAMIRD 197

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P      + K       + PN N       +  DG+KTG T  +G+N+V+SA +G+  L
Sbjct: 198 VPSEYDIHKEKEFTFNNIRQPNRNRLLWNKNMNVDGVKTGHTNGAGYNLVSSATEGNMRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE 295
           IAV+LGA     R   S  LL  GF        +        +  +  +       ++++
Sbjct: 258 IAVVLGAPSDKVRFAESERLLGWGFRFFETVTPVKENVPLTTQKVWYGDKGEVALGVAKD 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +               +  ++   
Sbjct: 318 ASITIPKGELKNLKASFTLTNPELEAPLTQNQIVGTV 354


>gi|254521328|ref|ZP_05133383.1| D-alanyl-D-alanine carboxypeptidase [Stenotrophomonas sp. SKA14]
 gi|219718919|gb|EED37444.1| D-alanyl-D-alanine carboxypeptidase [Stenotrophomonas sp. SKA14]
          Length = 406

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 89/320 (27%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YV+ + +K  K      + +S+ A 
Sbjct: 54  SKAWVLMDYATGQVLAGENVHEQLAPASITKVMTSYVIAAEVKNGKVRADDQVMMSERAW 113

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 114 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 173

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  +HF+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K PN
Sbjct: 174 AKIGMKDSHFVNAHGLTAQGHHSTAYDLALLGRAMVRDYPETYAYNKIKEFQVGNIKQPN 233

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV+LG      R   S +LL+ 
Sbjct: 234 RNLLLWRDGSVDGIKTGHTSEAGYCLMSSAQRGDQRLIAVVLGGASEKQRADDSLALLNW 293

Query: 263 GFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF      +             ++         +++   V   +    +    +   K  
Sbjct: 294 GFRFFETHRLYEPGKAVAEHKVWKGTTDKVQLGVAQPMLVSVPRGRYNDLKPSIDVPKTL 353

Query: 317 ESHFIDFEKITLLKNKITKK 336
           E+ F   +++  +K  +  K
Sbjct: 354 EAPFTAGQQVGTVKVTLDGK 373


>gi|165918943|ref|ZP_02219029.1| D-alanyl-D-alanine carboxypeptidase [Coxiella burnetii RSA 334]
 gi|165917340|gb|EDR35944.1| D-alanyl-D-alanine carboxypeptidase [Coxiella burnetii RSA 334]
          Length = 384

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 4/312 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
              +  Y L+D ++G VIA+        PASLTKLMT YV F  LK  +  L     +S 
Sbjct: 28  NLDVKGYVLMDADSGIVIAQKNMTQRLQPASLTKLMTLYVTFQALKSAQIHLDDKAKVSV 87

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K+G+ + ++  ++ +IV S ND  V +A+ +  TE  F Q MN T+  
Sbjct: 88  KAWRTGGSRMFLKEGAEVPVNLLIQGIIVASGNDACVTMAQYIGGTEPSFAQMMNQTAAR 147

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  +H++++ G+ +  HY+T  DMA+L+  I  DFP+Y HYF  K L     K PN N
Sbjct: 148 LGMKNSHYVDSTGLPRPDHYSTPYDMAVLTRAIINDFPEYYHYFSQKWLTYNNIKQPNRN 207

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +     ADG+KTG T  +G+ ++ASA + +  LI+V++GA   + R   S +LL+ GF
Sbjct: 208 RLLWRDGSADGLKTGHTEEAGYCLIASAKRNNMRLISVVMGAPTDSERADDSEALLNYGF 267

Query: 265 YNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                R+  +       K  +     +    +++ +  T     + N + + +   +   
Sbjct: 268 RFYQTRQLFDANTSITKKRIWMGKRKHAEFGLTQPLYVTLPVGEDKNLKARMSFAIQHLQ 327

Query: 321 IDFEKITLLKNK 332
               K       
Sbjct: 328 APILKGQSYGEI 339


>gi|229047768|ref|ZP_04193348.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH676]
 gi|228723560|gb|EEL74925.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus AH676]
          Length = 377

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 22  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEEVEKGKLKLTDKVRASE 81

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 82  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 141

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 142 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 201

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 202 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 261

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 262 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 321

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 322 KKVKAPIKKGDALGTLVIKK 341


>gi|153833629|ref|ZP_01986296.1| penicillin-binding protein 5 [Vibrio harveyi HY01]
 gi|156977638|ref|YP_001448544.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi ATCC BAA-1116]
 gi|148870027|gb|EDL68982.1| penicillin-binding protein 5 [Vibrio harveyi HY01]
 gi|156529232|gb|ABU74317.1| hypothetical protein VIBHAR_06426 [Vibrio harveyi ATCC BAA-1116]
          Length = 389

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 145/333 (43%), Gaps = 9/333 (2%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A        +  A       Y L+D +TG V+ E   D   NPASLTKLMTAYV    +K
Sbjct: 20  AFSFAAPTVVPNAPELSSRGYVLMDYHTGTVLVERDADKRLNPASLTKLMTAYVAGQEVK 79

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                L   + IS+NA        S    + G++++L +  + LIV+S ND +VAIAE +
Sbjct: 80  SGNISLDDEVVISRNAWAKNFPDSSKMFIEVGTSVSLSDLYRGLIVQSGNDASVAIAEHV 139

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  FV  MN+ +  LGLS + F N HG+   G Y+T RD+A L   I  D P     
Sbjct: 140 AGSEAGFVGLMNSWANQLGLSNSAFTNPHGLDSDGLYSTPRDIATLGRAIIRDLPDIYPL 199

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +        G    N N       +  DGMKTG+T  +G+++  SA  GD  L+AV++GA
Sbjct: 200 YSETSFTYNGITQYNRNGLLRDRSMSVDGMKTGYTSGAGYSLATSATNGDMRLVAVVMGA 259

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKE 302
              + R   S  LLS GF             +      +  N       +  ++  T  +
Sbjct: 260 KSPSVRESESKQLLSYGFRFFDTVVPTQAGKEVATARVWMGNQDELKVGVDRDIYLTLPK 319

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               N    E +         ++  ++   + K
Sbjct: 320 GD-VNKLEAEVEYNGDLMAPIQQNQVVGKVLYK 351


>gi|228987267|ref|ZP_04147388.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|228772496|gb|EEM20941.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 385

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMAKELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKLYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|253990345|ref|YP_003041701.1| penicillin-binding protein 6 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781795|emb|CAQ84958.1| penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidas
           fraction c) (dd-pept (dd-carboxypeptidase) (pbp-6)idase)
           [Photorhabdus asymbiotica]
          Length = 400

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 14/345 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    ++A+ +++N   + S      +     Y L+D ++G ++A N PD   +PASLTK
Sbjct: 10  KCVTAVLAVILVANTHAYASDEPLVPSVDAKAYVLMDYDSGKILASNNPDERLDPASLTK 69

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLI 112
           +MT+YV+   +K  K      +T+ K+A                K G  + + +  + ++
Sbjct: 70  IMTSYVIGQAIKAGKITPEDVVTVGKDAWATGNPVLKGSSLMFLKPGDQVKVIDLNRGIV 129

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND ++A+A+ +  ++  FV  MNN  K+LGL+ THF   HG+   G ++TARDMA+
Sbjct: 130 IQSGNDASIALADYVAGSQDTFVSLMNNYVKSLGLTNTHFQTVHGLDAEGQFSTARDMAV 189

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVAS 231
           LS  +  D P      + K       + PN N       +  DG+KTG+T  +G+N+VAS
Sbjct: 190 LSQAMIRDVPDEYVLHKEKAFTFNKIQQPNRNRLLWNKSINVDGVKTGYTSGAGYNLVAS 249

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSN 287
           A +G   LI+V+LGA     R   S  LLS GF        I      + +  +  + S+
Sbjct: 250 ATEGPMRLISVVLGAPSDRVRFAESEKLLSWGFRFYETVTPIKASESFVSEKVWYGDRSD 309

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            V  + ++   T       N +     ++        K  ++   
Sbjct: 310 VVLGVEKDAAITIPRGQLKNLKASYTLNQTPLEAPLAKNQVVGVI 354


>gi|91776847|ref|YP_546603.1| penicillin-binding protein 6 [Methylobacillus flagellatus KT]
 gi|91710834|gb|ABE50762.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Methylobacillus flagellatus KT]
          Length = 385

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/331 (27%), Positives = 151/331 (45%), Gaps = 6/331 (1%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
                ML      +    T  +  Y L D N+  VIAE   +    PASLTK+MTAY+ F
Sbjct: 18  AFTANMLMAHAADIPQPPTLAVKSYQLYDFNSERVIAEQDGNSRVEPASLTKIMTAYLAF 77

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             +K     LT  + +S  A +   S    +    +T+D  L  +I++S ND ++A+AE 
Sbjct: 78  KAIKNGHLTLTQTLPVSVKAWKVEGSKMFIEPNKPVTVDELLHGMIIQSGNDASIALAEG 137

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E+ F + MN  +  LG+  TH++NA G+    HYTTA D+A+L+  +  DFP +  
Sbjct: 138 IAGSEEGFAELMNKEAARLGMKGTHYVNATGLPDPQHYTTAHDLALLAAALIRDFPDHYK 197

Query: 187 Y-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             + +K         PN N  +      DGMKTG T ++G+ +V SA +GD  +I+V+LG
Sbjct: 198 RLYSMKEYTYNKISQPNRNRLLWLDPYVDGMKTGHTKSAGYCLVTSAKRGDTRMISVVLG 257

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQK 301
           A     R   S  LL+ GF     +       +      ++   ++ V  +++ V  T  
Sbjct: 258 APSDAARATESQKLLNYGFQFYESKLVYKRGAEVSSLKVWKGAENSVVATVAKNVSITLP 317

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +      + K    ++           +   
Sbjct: 318 KGEYARVKAKVV-SQQPLIAPVSAGQQVGKI 347


>gi|283784604|ref|YP_003364469.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Citrobacter rodentium ICC168]
 gi|282948058|emb|CBG87622.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Citrobacter rodentium ICC168]
          Length = 400

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++   A           A   +   + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  LLFLFAPAVMAAEQTIAAPAVEARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +TI K+A           S    K G  + + +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTIGKDAWATGNPALRGSSVMFLKPGDRVAVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G Y+TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFRTVHGLDAPGQYSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + +  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNINVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R   S  LL+ GF        I      + +  +  + S       E
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFYETVTPIKPDATFVTQRVWFGDKSEVNLGAGE 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T       N +      +       +K  ++   
Sbjct: 317 AGSVTIPRGQLKNLKASFTLSEPQLTAPLKKGQVVGTI 354


>gi|229163014|ref|ZP_04290970.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus R309803]
 gi|228620420|gb|EEK77290.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus cereus R309803]
          Length = 385

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ +  P+    PAS+TK+MT  ++   +++ K  LT  +  S+
Sbjct: 30  AEQASSAIVIEQDTGKVLFDKNPNEKLPPASMTKIMTMLLIMEQVEKGKLKLTDKVRASE 89

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 90  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DMAI+                +   ++    K    
Sbjct: 150 LGLKNTHFQNPTGLPAKDHYSTANDMAIMARELMKYPLIRKYTGKYEDYLREDTDKKFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 210 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 269

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F     +K      K    Q    +   +    S+ V    K+  N +   +E   +
Sbjct: 270 DYAFGQYMTKKMYTRGEKIKTVQVGKGKKEKVDLVASDNVSLLMKKGENMDKVKQEVIAE 329

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 330 KKVKAPIKKGDALGTLVIKK 349


>gi|313202207|ref|YP_004040865.1| beta-lactamase [Methylovorus sp. MP688]
 gi|312441523|gb|ADQ85629.1| Beta-lactamase [Methylovorus sp. MP688]
          Length = 378

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 92/336 (27%), Positives = 148/336 (44%), Gaps = 6/336 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R F ++ A+  L+     +    +  +  Y L D N+   IA+   D    PASLTKLMT
Sbjct: 6   RIFTLVAAVCSLTVQAAEIPPPPSLAVKSYVLRDFNSQSTIAQQAGDERVEPASLTKLMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AY+ F  +K     LT  + IS  A +   S    +    +T+D  L  +I++S ND ++
Sbjct: 66  AYLSFKAVKNGHLQLTQTLPISIKAWKVEGSKMFVEPNRPVTVDELLHGMIIQSGNDASI 125

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  TE+ F   MN  +  LG+  THFMNA G+    HYTTA D+++L+  +  DF
Sbjct: 126 ALAEGIAITEEAFADLMNKEAARLGMKNTHFMNATGLPDPQHYTTAYDLSLLASALIRDF 185

Query: 182 PQYMHY-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+     +  K         PN N  +      DGMKTG T  +G+ +++SA +G+  LI
Sbjct: 186 PEDYKRLYSQKQYSYNNITQPNRNRLLWLDPYVDGMKTGHTKTAGYCLISSAKRGETRLI 245

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
           +V+LG    + R   S  LL+ GF                    ++   +     +  ++
Sbjct: 246 SVVLGTPSDSARATESQKLLNYGFQFYESHLVYKRGQPINQLKVWKGQDNLVAATVPTDL 305

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             T  +      + K    +            +   
Sbjct: 306 SITLPKGEYARVKAKVTSRQP-LIAPISAGQDVGTI 340


>gi|269961828|ref|ZP_06176185.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi 1DA3]
 gi|269833406|gb|EEZ87508.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi 1DA3]
          Length = 389

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 145/333 (43%), Gaps = 9/333 (2%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A        +  A       Y L+D +TG V+ E   D   NPASLTKLMTAYV    +K
Sbjct: 20  AFSFAAPTVVPNAPELSSRGYVLMDYHTGTVLVERDADKRLNPASLTKLMTAYVAGQEVK 79

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                L   + IS+NA        S    + G++++L +  + LIV+S ND +VAIAE +
Sbjct: 80  SGNISLDDEVVISRNAWAKNFPDSSKMFIEVGTSVSLSDLYRGLIVQSGNDASVAIAEHV 139

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  FV  MN+ +  LGLS + F N HG+   G Y+T RD+A L   I  D P     
Sbjct: 140 AGSEAGFVGLMNSWANQLGLSNSAFTNPHGLDSDGLYSTPRDIATLGRAIIRDLPDIYPL 199

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +        G    N N       +  DGMKTG+T  +G+++  SA  GD  L+AV++GA
Sbjct: 200 YSETSFTYNGITQYNRNGLLRDRSMSVDGMKTGYTSGAGYSLATSATNGDMRLVAVVMGA 259

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKE 302
              + R   S  LLS GF             +      +  N       +  ++  T  +
Sbjct: 260 KSPSVRESESKQLLSYGFRFFDTVVPTQAGKEVATARVWMGNQDELKVGVDRDIYLTLPK 319

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               N    E +         ++  ++   + K
Sbjct: 320 GD-VNKLEAEVEYNGDLMAPIQQDQVVGKVLYK 351


>gi|300313593|ref|YP_003777685.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding)
           transmembrane protein [Herbaspirillum seropedicae SmR1]
 gi|300076378|gb|ADJ65777.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding)
           transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 384

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 170/354 (48%), Gaps = 19/354 (5%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ L      +++++ L           T     + LLD +   VIA + PD    PAS
Sbjct: 1   MKKLLAALAATVLSISTL-TASAQSLPPPTVAAKSWLLLDASANQVIASSDPDTRVEPAS 59

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIV 113
           LTKLMTAY+ F+ L++K+  L   +++S NA +  P  S    +    +++DN L  LI 
Sbjct: 60  LTKLMTAYLAFAALRDKRLSLEQEVSVSVNAWKVDPSSSKMFIEPNKPVSIDNLLYGLIS 119

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND AVA+AE++  TE  FVQ MN  ++  GL+ THF N HG+     YTTARD++IL
Sbjct: 120 VSGNDAAVAVAEAVSGTEDAFVQLMNREAQRQGLTNTHFSNPHGLPSPDTYTTARDLSIL 179

Query: 174 SWRIKTDFPQYMH-YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
              +  DFP+Y   Y+ +K         PN N  +      DGMKTG T ++G++++ SA
Sbjct: 180 CRNLINDFPEYYKRYYSVKKFTYNNITQPNRNRLLWLDPTVDGMKTGHTSSAGYSLITSA 239

Query: 233 IQ----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQN 284
            +    G++ LI+V++G +    R + S  LL+ GF N    K           D ++ +
Sbjct: 240 HRPVPNGERRLISVVIGTVSDQVRTQESQKLLNWGFQNFDAVKLYAKGQPVDTPDVWKGS 299

Query: 285 LSNEVPNISEEV--CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                     +V     +       T++       +   +  K+  LK  I  K
Sbjct: 300 QGKIKVGFKNDVYITIPKGTADKVKTKLDRNDPLIAPIAEGAKVGTLKVTIDDK 353


>gi|295706485|ref|YP_003599560.1| D-alanine-D-alanine carboxypetidase [Bacillus megaterium DSM 319]
 gi|294804144|gb|ADF41210.1| D-alanine-D-alanine carboxypetidase [Bacillus megaterium DSM 319]
          Length = 388

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 12/346 (3%)

Query: 3   QFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + LV+I +  L       +        +      L++ +TG ++ E   +    PAS+TK
Sbjct: 7   KLLVVIFLFPLMTQPVLAAEKKNSELADSARSAILIERDTGKILYEKNSNQELPPASMTK 66

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  ++   L + K  L   +  S+ A+    S    + G  MT+++ LK + + S ND
Sbjct: 67  IMTMILIMEALDKGKITLKDKVRASEYAASMGGSQIFLEPGEEMTVNDLLKGIAIGSGND 126

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+AE L  +E+KFV  MN  +K LGL+ T F N  G+    HY+TA DMA++   + 
Sbjct: 127 ASMAMAEHLAGSEEKFVAKMNQKAKELGLTHTKFQNPTGLPVENHYSTAHDMAMMGRELL 186

Query: 179 TDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                  +  +     +    K     NTN  V  + G DG+KTGFT  + + + A+A +
Sbjct: 187 KYEKIINYTSKYEAYLRTDTDKKFWLVNTNRLVKFYPGVDGLKTGFTGQAKYCLTATAKK 246

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVP 290
           G+  ++AV+ GA     RN     +L   F   T +            D  + +      
Sbjct: 247 GNMRVLAVVFGASTPKDRNNQVTKMLDYAFSQYTTKPLYKKGDVITKIDVNKGSEDQVTA 306

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             SE +    K+         E K  E      +K   +     KK
Sbjct: 307 VTSEPISVLLKKGNAAKDVKTEVKMNEKLNAPIQKGDKIGTLTIKK 352


>gi|118602482|ref|YP_903697.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567421|gb|ABL02226.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 375

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/337 (28%), Positives = 166/337 (49%), Gaps = 2/337 (0%)

Query: 1   MRQFLVIIAMAMLSN--IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  +++I+  +L+   +      A       Y+++D N+G VIA +       PASLTK
Sbjct: 7   IKPLVILISSLVLNTQAVIFITPKAPKISTAAYSIVDYNSGKVIASSKQHDKRAPASLTK 66

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAYVVF F+ + +  L   + ISK A +   S S  + G ++ L+  LK +I++S ND
Sbjct: 67  LMTAYVVFQFINDGRISLEDEVRISKKAWKTGGSKSFVEVGKSIKLETLLKGMIIQSGND 126

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            AVA+AE +  TE  F  +MN  ++ LG++ + F NA G+     YTTA D+ +L+    
Sbjct: 127 SAVALAEHIAGTESTFTTYMNEYARQLGMNNSWFENASGLPNDNQYTTAADITLLAIATI 186

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFP++  ++  K     G K  N N  + +    DG+KTGFT  +G+N+VASA +    
Sbjct: 187 RDFPKFYQWYSQKEFTYHGIKQRNRNKLLWSDHTVDGLKTGFTKKAGYNLVASAKRAGMR 246

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           LI+V+LG+   N R   +  +L  GF     +   +   +        + +   + +V +
Sbjct: 247 LISVVLGSSSVNARTSQTQKILDYGFRFFETQTIKDIKKEVPIASATKDTLKVGTSKVGS 306

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                  +    +  +   +     +K  ++   + +
Sbjct: 307 FTLVRGQFKLSDQVIQLDTALSAPIKKGDIVGKLLIQ 343


>gi|293606885|ref|ZP_06689233.1| D-alanyl-D-alanine carboxypeptidase DacA [Achromobacter piechaudii
           ATCC 43553]
 gi|292814737|gb|EFF73870.1| D-alanyl-D-alanine carboxypeptidase DacA [Achromobacter piechaudii
           ATCC 43553]
          Length = 386

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 160/349 (45%), Gaps = 13/349 (3%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++    +++A A LS+               + LLD  +G VIA +       PASLTK
Sbjct: 3   MKKLAASLLVATACLSSAMAQSMPQPELSAKAWLLLDETSGQVIASHAATTRIEPASLTK 62

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSA 116
           +MTAYVVF  L +K+      + IS  A + P   S    + GS +T+D+ L+ L+++S 
Sbjct: 63  IMTAYVVFDALSKKELSANQTVVISTRAWKVPAGSSKMFLEPGSKVTVDDLLRGLMIQSG 122

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+A+AE++  + + FV  MN+T+  LGL ATHF + HG+   G Y+TA D+++L+ R
Sbjct: 123 NDAAIALAEAVSGSVEAFVARMNDTAARLGLHATHFASPHGLPDPGTYSTASDLSVLATR 182

Query: 177 IKTDFPQYMH-YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ- 234
              D+PQ    Y   K         PN N  +      DG+KTG T ++G+ IVA+A + 
Sbjct: 183 FIRDYPQLYKTYDSAKQFTFNKITQPNRNRLLWLDPSVDGLKTGHTDSAGYCIVATARRP 242

Query: 235 ---GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSN 287
                + LI V++G      R + S  LL  GF      K           + ++    +
Sbjct: 243 NGSDQRRLITVVVGTASDKLRTQESRQLLEWGFQGFNTIKLYARGQAVATPEVWKGASDS 302

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                + +   T              +   +     + +  L+  +  K
Sbjct: 303 LKAGFARDAYVTVPAGAKVEPVWTPQQPLVAPIAAQDTVGALRVLVDGK 351


>gi|294501138|ref|YP_003564838.1| D-alanine-D-alanine carboxypetidase [Bacillus megaterium QM B1551]
 gi|294351075|gb|ADE71404.1| D-alanine-D-alanine carboxypetidase [Bacillus megaterium QM B1551]
          Length = 388

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 12/346 (3%)

Query: 3   QFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + LV+I +  L       +        +      L++ +TG ++ E   +    PAS+TK
Sbjct: 7   KLLVVIFLFPLMTQPVLAAEKKNSELADSARSAILIERDTGKILYEKNSNQELPPASMTK 66

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  ++   L + K  L   +  S+ A+    S    + G  MT+++ LK + + S ND
Sbjct: 67  IMTMILIMEALDKGKITLKDKVRASEYAASMGGSQIFLEPGEEMTVNDLLKGIAIGSGND 126

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+AE L  +E+KFV  MN  +K LGL+ T F N  G+    HY+TA DMA++   + 
Sbjct: 127 ASMAMAEYLAGSEEKFVAKMNQKAKELGLTHTQFQNPTGLPVENHYSTAHDMAMMGRELL 186

Query: 179 TDFPQYMHYFQI----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                  +  +     +    K     NTN  V  + G DG+KTGFT  + + + A+A +
Sbjct: 187 KYEKIINYTSKYEAYLRTDTDKKFWLVNTNRLVKFYPGVDGLKTGFTGQAKYCLTATAKK 246

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVP 290
           G+  ++AV+ GA     RN     +L   F   T +            D  + +      
Sbjct: 247 GNMRVLAVVFGASTPKDRNNQVTKMLDYAFSQYTTKPLYKKGDVITKIDVNKGSEDQVTA 306

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             SE +    K+         E K  E      +K   +     KK
Sbjct: 307 VTSEPISVLLKKGNAAKDVKTEVKMNEKLNAPIQKGDKIGTLTIKK 352


>gi|260777151|ref|ZP_05886045.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606817|gb|EEX33091.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 388

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 151/347 (43%), Gaps = 18/347 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF--------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++  ++ A    S    F        +    T     Y L+D NTG V+ E   +   N
Sbjct: 1   MKKTFLLKAALFSSIAVTFNAIAAPTIIPEPPTLGAKGYVLIDYNTGQVLVEKNANTKLN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALK 109
           PASLTKLMTAYV    +K     L   + ISKNA        S    + G+T+ L +  +
Sbjct: 61  PASLTKLMTAYVAGQEVKAGNITLDDQVVISKNAWAKNFPDSSKMFIEVGTTVPLMDLYR 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            LIV+S ND +VAIAE +  +E  FV  MN+ ++ LGL  T + N HG+  +G Y+T  D
Sbjct: 121 GLIVQSGNDASVAIAEYVAGSEGAFVNLMNSWAEKLGLENTAYTNPHGLDSNGLYSTPMD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNI 228
           +A L   I  D P     +        G    N N       +  DGMKTG+T  +G+++
Sbjct: 181 IAKLGQAIIRDLPDIYPLYSETSYTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYSL 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
             SA  GD  LIAV++GA    +R   S  LLS GF                  +    E
Sbjct: 241 TTSATSGDMRLIAVVMGASSTKSRESESKQLLSYGFRFFETVSPTKAGDTVTEAKVWMGE 300

Query: 289 VPNISEEV------CTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
              +S  V         +        +++  ++  +   + EK+  +
Sbjct: 301 QDQLSVGVNEDIYMTLPKGNAAKLTAEVEFDRELVAPITEGEKVGTI 347


>gi|303238776|ref|ZP_07325308.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetivibrio
           cellulolyticus CD2]
 gi|302593655|gb|EFL63371.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetivibrio
           cellulolyticus CD2]
          Length = 384

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 5/340 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+   V + +A+ + + P    AE  +      L++ +TG V+ E   +    PAS+TK+
Sbjct: 7   MKFLSVFLLIAIFTTMHPLNIYAEFESTAGSAILIEASTGQVLYEKNSEVSMPPASITKV 66

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT  + F  + +  A  T  +++S+ A +   S    + GS ++  + +  + + SAND 
Sbjct: 67  MTLLLGFEAISKGTAKWTDLVSVSEKAWKMEGSKMFLQVGSKVSYRDIIMGISIDSANDG 126

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+AE LC +E  FV  MN  +K +GL  + F N  G+ Q GH  TA+D+ ILS  +  
Sbjct: 127 CIALAEYLCGSENAFVSAMNEKAKEIGLKNSTFKNCTGLPQEGHRLTAKDIVILSRYLIQ 186

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           ++P+ +             +  N N  +G + GADG+KTG+T  +G+ + A+A Q    L
Sbjct: 187 NYPEILEIESKTEFTFNDIRQFNRNPLLGVYEGADGLKTGWTEEAGYCLAATAKQNGIRL 246

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKT--DRKKINYIIK--DFYQQNLSNEVPNISEE 295
           IAV+L   D   R      LL+ GF N    D KK   I+   +      ++    +  +
Sbjct: 247 IAVVLNTKDEKERQIAGQELLTYGFKNFKFLDYKKSGDIVDNINIENGKKTSTPLKLDND 306

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +          + +   +K+ +S                K
Sbjct: 307 IKVLIPISREKDLKTVISKNSQSLIAPINAGVSAGKLEVK 346


>gi|251789994|ref|YP_003004715.1| beta-lactamase [Dickeya zeae Ech1591]
 gi|247538615|gb|ACT07236.1| Beta-lactamase [Dickeya zeae Ech1591]
          Length = 402

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +                    + L+D+ +G V+AE+  D   +PASLTK+M++YV+ 
Sbjct: 20  VLMVVSSGLRAEQTPPPPQIDAKAFILIDSASGRVLAESNADTRLDPASLTKIMSSYVIG 79

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+ K+A      +         K G  +++ +  K ++++S ND +
Sbjct: 80  QAIKVGKIKPEDKVTVGKDAWATGNPSLRGSSLMFLKPGDQISVSDLNKGMVIQSGNDAS 139

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  FV  MN  + NLGL+ THF+  HG+   G Y+TARDMA L+  +  D
Sbjct: 140 IALADYVAGSQDAFVSLMNQYALNLGLTNTHFLTVHGLDTPGQYSTARDMARLTQALIRD 199

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P        K       + PN N       L  DG+KTG+T  +G ++VASA+ GD  L
Sbjct: 200 VPSEYALHSEKEFTFNNIRQPNRNRLLWSGNLRVDGVKTGYTDGAGHSLVASAVDGDMRL 259

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           I+V+LGA     R + S  LL+ GF        +           +  +       ++++
Sbjct: 260 ISVVLGAPSDAVRFRESEKLLTWGFRFFETATLVRSDTPFTTHRVWFGSEKQARLGVAQD 319

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N ++     +       +K  ++   
Sbjct: 320 AALTVPKGQTKNLKVSFTLAQPQLKAPLKKGQVVGTI 356


>gi|290473971|ref|YP_003466845.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Xenorhabdus bovienii SS-2004]
 gi|289173278|emb|CBJ80053.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Xenorhabdus bovienii SS-2004]
          Length = 401

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/346 (27%), Positives = 154/346 (44%), Gaps = 14/346 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ F V + +  L  +  +      A       Y L+D  +G ++A + PD   +PASLT
Sbjct: 10  IKSFTVGLGIFWLMGVNTYAMDEPAAPEIDAKSYILMDYASGKILASHNPDERLDPASLT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+MT+YVV   +K  K      +T+ K+A                K G  + + +  + +
Sbjct: 70  KVMTSYVVGQSIKSGKISTEDQVTVGKDAWATGNPALKGSSLMFLKPGDRVKVIDLNRGI 129

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MN  SK LGL  THF   HG+   G Y+TARDMA
Sbjct: 130 VIQSGNDASIALADYVAGSQDAFVDLMNKYSKTLGLENTHFKTVHGLDAAGQYSTARDMA 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  +  D P+     + K       + PN N       +  DG+KTG T  +G+N+VA
Sbjct: 190 LLSQAMIRDVPEEYALNKEKEFTFNNIRQPNRNRLLWNQNMNVDGVKTGHTSGAGYNLVA 249

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLS 286
           SA +G   LI+V+LGA     R   S  +LS GF        +      + +  +    S
Sbjct: 250 SAAEGSMRLISVVLGAPSDRMRFSDSEKILSWGFRFYEASTPLKASDTLVTERVWFGTRS 309

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                + ++   T       N +      + S      K  ++   
Sbjct: 310 EVALGVEKDTAVTVPRGQANNLKASFTLTQTSLEAPLAKNQVVGTV 355


>gi|254000240|ref|YP_003052303.1| beta-lactamase [Methylovorus sp. SIP3-4]
 gi|253986919|gb|ACT51776.1| Beta-lactamase [Methylovorus sp. SIP3-4]
          Length = 378

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 147/336 (43%), Gaps = 6/336 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R F ++  +  L+     +    +  +  Y L D N+   IA+   D    PASLTKLMT
Sbjct: 6   RIFTLVATVCSLTVQAAEIPPPPSLAVKSYVLRDFNSQSTIAQQAGDERVEPASLTKLMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AY+ F  +K     LT  + IS  A +   S    +    +T+D  L  +I++S ND ++
Sbjct: 66  AYLSFKAVKNGHLQLTQTLPISIKAWKVEGSKMFVEPNRPVTVDELLHGMIIQSGNDASI 125

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  TE+ F   MN  +  LG+  THFMNA G+    HYTTA D+++L+  +  DF
Sbjct: 126 ALAEGIAITEEAFADLMNKEAARLGMKNTHFMNATGLPDPQHYTTAYDLSLLASALIRDF 185

Query: 182 PQYMHY-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+     +  K         PN N  +      DGMKTG T  +G+ +++SA +G+  LI
Sbjct: 186 PEDYKRLYSQKQYSYNNITQPNRNRLLWLDPYVDGMKTGHTKTAGYCLISSAKRGETRLI 245

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
           +V+LG    + R   S  LL+ GF                    ++   +     +  ++
Sbjct: 246 SVVLGTPSDSARATESQKLLNYGFQFYESHLVYKRGQPINQLKVWKGQDNLVAATVPTDL 305

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             T  +      + K    +            +   
Sbjct: 306 SITLPKGEYARVKAKVTSRQP-LIAPISAGQDVGTI 340


>gi|228998860|ref|ZP_04158445.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus mycoides Rock3-17]
 gi|228760876|gb|EEM09837.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus mycoides Rock3-17]
          Length = 386

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ E  P+    PAS+TK+MT  ++   +++ K  L   +  S+
Sbjct: 31  AEEASSAIVIEQDTGKVLFEKSPNEKLPPASMTKIMTMLLIMEQVEKGKLKLEDKVRASE 90

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 91  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 150

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DM+I+                +   ++    K    
Sbjct: 151 LGLKNTHFQNPTGLPAKDHYSTAYDMSIMAKELMKYPLIRKYTGKYEDYLRENTEKKFWL 210

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 211 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 270

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F   T +K      K    +    +   +    S+ V    K+  N +   +E   +
Sbjct: 271 DYAFGQYTTKKLYKRGEKIQTVKVGKGKKEKVDLVSSDNVSLLMKKGENMDKVKQEVIAE 330

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 331 KKVKAPIKKGDALGTLVIKK 350


>gi|21241435|ref|NP_641017.1| penicillin-binding protein 6 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106773|gb|AAM35553.1| penicillin-binding protein 6 [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 401

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSTAYDLALLGRAMVRDYPETYAYNKIKEFQVGTIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDSSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|78046281|ref|YP_362456.1| D-alanyl-D-alanine carboxypeptidase precursor [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|289667540|ref|ZP_06488615.1| D-alanyl-D-alanine carboxypeptidase precursor [Xanthomonas
           campestris pv. musacearum NCPPB4381]
 gi|78034711|emb|CAJ22356.1| D-alanyl-D-alanine carboxypeptidase precursor [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 401

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSTAYDLALLGRAMVRDYPETYAYNKIKEFQVGTIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDSSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|323498490|ref|ZP_08103483.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sinaloensis DSM 21326]
 gi|323316379|gb|EGA69397.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sinaloensis DSM 21326]
          Length = 385

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 94/347 (27%), Positives = 145/347 (41%), Gaps = 14/347 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+    + +    +   F +              Y L+D +TG V+ E   D   NPAS
Sbjct: 1   MRKPFFAVTLLTSVSFAGFAAPTIVPDPPVIGAKGYILMDYHTGAVLVEKNADSQLNPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMTAYV    +      L   +TIS+ A        S    + G+ + L +  + LI
Sbjct: 61  LTKLMTAYVAGQEVANGNIGLDDQVTISERAWAKNFPDSSKMFIEVGTQVALSDLYRGLI 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ +  LGL  + F N HG+     Y+T RD+A 
Sbjct: 121 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAAKLGLENSAFSNPHGLDSDALYSTPRDIAT 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           LS  I  D P     +  +     G    N N       L  DGMKTG+T  +G+++  S
Sbjct: 181 LSQAIIRDLPTIYPLYSERAFTYNGITQYNRNGLLRDRSLHVDGMKTGYTSGAGYSLATS 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSN 287
           A  G+  LI+V++G+    +R   S  LLS GF                    +     +
Sbjct: 241 ATNGNMRLISVVMGSSSTKSRESESKQLLSYGFRFFDTIAPAEAGETLSEVKVWMGQQDS 300

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               I+     T  +  +   + +   +         K  ++ + + 
Sbjct: 301 LPVGIATNSYLTLSKGDSDKLKAEIETN-GDLTAPIAKGAIVGSVVY 346


>gi|294627617|ref|ZP_06706199.1| penicillin-binding protein 6 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292597969|gb|EFF42124.1| penicillin-binding protein 6 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 401

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSTAYDLAMLGRAMVRDYPETYAYNKIKEFQVGNIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDSSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|209886488|ref|YP_002290345.1| serine-type D-Ala-D-Ala carboxypeptidase [Oligotropha
           carboxidovorans OM5]
 gi|209874684|gb|ACI94480.1| serine-type D-Ala-D-Ala carboxypeptidase [Oligotropha
           carboxidovorans OM5]
          Length = 492

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 112/322 (34%), Positives = 176/322 (54%), Gaps = 5/322 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R +L+ IA A+  +++   +     +   Y L+D ++G V+       PW PASLTK+MT
Sbjct: 13  RIWLIAIAAALSLSLWARPA-----QAEAYLLIDASSGKVLQATNATQPWYPASLTKIMT 67

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AYV  S +K+ +  L T +T+S NA    PS   F  G+ +T+DNALK+++VKSAND+AV
Sbjct: 68  AYVTLSAVKQGRINLDTLLTVSPNALSQAPSKMGFPAGTQVTVDNALKMMMVKSANDMAV 127

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +AE +  +   F   MN T++ LG++ TH++N +G+      ++ARD+ ILS     D 
Sbjct: 128 VLAEGVGGSVDGFSALMNETARQLGMTQTHYVNPNGLPDDRQISSARDLGILSRAFYRDL 187

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P+Y +Y  + G++   +   N N  +G + GADG+KTGF CASGFN+VASA + D+ LIA
Sbjct: 188 PEYQYYAHLPGIKFGRRITHNFNKLIGRYPGADGLKTGFICASGFNLVASATRNDRHLIA 247

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V+LGA     R   +A LL  GF           +        +    PN+ ++VC   +
Sbjct: 248 VVLGASSSAQRTVKAAQLLEKGFNGSKLAWLKPSLGTVEQLPPVDALPPNLRDQVCGPHR 307

Query: 302 EIINYNTQMKEAKDKESHFIDF 323
           +      +  + +    +  D 
Sbjct: 308 KRPAAEDEDDDIEITLDNQSDV 329


>gi|221134237|ref|ZP_03560542.1| D-alanyl-D-alanine carboxypeptidase [Glaciecola sp. HTCC2999]
          Length = 385

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 158/343 (46%), Gaps = 12/343 (3%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++ L+    I  + ++     +  A +     Y LLD NTG VIAE   D    PASLT
Sbjct: 1   MQKLLIVWSFICFSFVAQAVVIIPPAPSVAAKGYILLDANTGDVIAEQNADMQLAPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVK 114
           K+MT YV+   L+     LT  + IS+NA        S    + G+ +++ + +  ++V+
Sbjct: 61  KIMTMYVIGQELQAGNIALTDEVIISENAWAKNFPDSSKMFIEVGTRVSVSDLMHGIVVQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  VA+AE +  +E+ F   MN  +  LG++AT+F+NAHG+    H+T+ RDMA+LS
Sbjct: 121 SGNDACVAMAEHIAGSEEAFASMMNAHAAKLGMTATNFVNAHGLHDSQHFTSPRDMAVLS 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAI 233
             +  D P+    +  K       +  N N  +    L  DG+KTG T  +G++++ SA 
Sbjct: 181 RALIKDNPEEYELYSKKEFTYNNIRQYNRNSLLWDKALSVDGIKTGHTSDAGYSLITSAT 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEV 289
           QGD  L++V++G      R   +  LL  GF                    Y  +     
Sbjct: 241 QGDMRLVSVVMGTDSERARKVENKKLLRYGFRFFESISPYQAGHSFVAHRIYMGDRKTID 300

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             I+++V  T       N +     D+       +K  ++   
Sbjct: 301 LGITQDVSLTIPRGQAKNLKANYIIDR-HLEAPLKKGEVVGVL 342


>gi|228992815|ref|ZP_04152740.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus pseudomycoides DSM 12442]
 gi|228766864|gb|EEM15502.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus pseudomycoides DSM 12442]
          Length = 386

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 8/320 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     +++ +TG V+ E  P+    PAS+TK+MT  ++   +++ K  L   +  S+
Sbjct: 31  AEEASSAIVIEQDTGKVLFEKSPNEKLPPASMTKIMTMLLIMEQVEKGKLKLEDKVRASE 90

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S    + G  MT++  LK + + S ND +VA+AE +  +E+ FV  MN  +K+
Sbjct: 91  HAASMGGSQIFLEPGEEMTVNEMLKGIAIASGNDASVAVAEHIAGSEEGFVNMMNKKAKD 150

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LGL  THF N  G+    HY+TA DM+I+                +   ++    K    
Sbjct: 151 LGLKNTHFQNPTGLPAKDHYSTAYDMSIMAKELMKYPLIRKYTGKYEDYLRENTEKKFWL 210

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  V  + G DG+KTGFT  + + + ASA +    +I+V++GA     RN     LL
Sbjct: 211 VNTNKLVRFYPGVDGVKTGFTTEAKYCLTASAEKNGMRVISVVMGAPTSKERNNQVTKLL 270

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDK 316
              F   T +K      K    +    +   +    S+ V    K+  N +   +E   +
Sbjct: 271 DYAFGQYTTKKLYKRGEKIQTVKVGKGKKEKVDLVSSDNVSLLMKKGENMDKVKQEVIAE 330

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K   L   + KK
Sbjct: 331 KKVKAPIKKGDALGTLVIKK 350


>gi|113460464|ref|YP_718526.1| penicillin-binding protein [Haemophilus somnus 129PT]
 gi|112822507|gb|ABI24596.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Haemophilus somnus 129PT]
          Length = 388

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 14/349 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++  + +   ++S             +       Y L+D ++G V+A   PD   +PAS
Sbjct: 1   MKKTKIALMSGLISLPALSQDIQYGIASPELSAQSYILMDYHSGAVLAAFNPDQRQHPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLI 112
           LTK+MT+YVV   +K+ K  LT  +TI ++A        S         +++ +  + ++
Sbjct: 61  LTKMMTSYVVGDAIKQGKISLTDTVTIDESAWGKNFPGSSKMFLNLNQQVSVADLNRGIV 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  VAIAE +  +E+ F++ MN      GL  T+FM  HG+     Y++ARDMAI
Sbjct: 121 IVSGNDACVAIAEHIAGSERNFIELMNKYVAKFGLKNTNFMTVHGLDDDNQYSSARDMAI 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           +   I  D P+    +  K       K  N N       +  DGMKTG T  +G+N+VAS
Sbjct: 181 IGRHIIHDLPEEYKIYAEKEFTFNKIKQHNRNGLLWDKSIKVDGMKTGHTNKAGYNLVAS 240

Query: 232 A-IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLS 286
           A    +  LI+V++G      R   S  LL  GF N    K +      + +  Y  N S
Sbjct: 241 AVNNNNMRLISVVMGVATHKGREIESKKLLQWGFANFETFKSLQANQSIVEEKVYYGNTS 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                + E+   T  +    + + +   +++       K  ++   I +
Sbjct: 301 KVQLGVLEDAYITLPKGRQNDVKTRYELNQKMLTAPLAKGQIVGKIIYQ 349


>gi|166710542|ref|ZP_02241749.1| D-alanyl-D-alanine carboxypeptidase precursor [Xanthomonas oryzae
           pv. oryzicola BLS256]
          Length = 401

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P    Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLTAEGHHSTAYDLAMLGRAMVRDYPDTYAYNKIKEFQVGSIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDSSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|238897881|ref|YP_002923560.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465638|gb|ACQ67412.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 384

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L  +A +    +   + +    K   Y L+D N+G ++AE   D    PASLTK+MT+YV
Sbjct: 3   LTTLAYSDSILLSNLIPVPPEIKAVSYILMDYNSGKILAEKNADEHRMPASLTKMMTSYV 62

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           +   +K +K  +   +T+ K+A                K G  +++    + + ++S ND
Sbjct: 63  IGQAIKSEKIGVNDIVTVGKDAVSTGNPEFKGSSLMFLKPGDQVSVAQLTRGITLQSGND 122

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             VA+A  +  ++  FV  MN  ++ +GL  THF N HG+   G YT+ARDMA++   + 
Sbjct: 123 ACVAMANYVAGSQDSFVHLMNAYAQEMGLKNTHFKNVHGLDSEGQYTSARDMALMGRALI 182

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P     ++ K       +  N N       L  DG+KTG T A+G+N+VASA QG  
Sbjct: 183 HDVPDEYAIYKEKEFTFNQIRQLNRNGLLWDKSLNVDGIKTGHTNAAGYNLVASATQGPM 242

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNIS 293
            LI+V+LG      R   S  LLS GF      + +        +  +  +++     + 
Sbjct: 243 RLISVVLGGRTFKEREAESKKLLSWGFRFFETVEPLKAGDVFASRPVWFGDVNTAQLGVD 302

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           + +  T  +    + ++    ++       +K  ++ + 
Sbjct: 303 KNIYLTLPKDQGKHLKLSFVLNQSELRAPLKKNQIVGSI 341


>gi|332993383|gb|AEF03438.1| D-alanyl-D-alanine carboxypeptidase [Alteromonas sp. SN2]
          Length = 394

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 94/336 (27%), Positives = 156/336 (46%), Gaps = 10/336 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F++  A+ + +N       A +     + L D  TGHVIA    D    PASLTK+MT Y
Sbjct: 17  FMLFSALVLSANAAVVTPPAPSVAAEGFLLTDFETGHVIASKNADMQLAPASLTKIMTIY 76

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           V+   L+     L+  +TIS+NA        S    + G+ +++ + L+ ++V+S ND  
Sbjct: 77  VIGKELQAGNISLSDEVTISENAWAKKFPDSSKMFIEVGTQVSVSDLLRGIVVQSGNDAC 136

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  ++  F   MN  ++ +G+++++F+NAHG+    HYTT RDMA+LS  +  +
Sbjct: 137 VAMAEHVAGSQAAFASMMNAHAQAIGMTSSNFVNAHGLHDPDHYTTPRDMAVLSRALIAE 196

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    +  K     G K  N N       L  DG+KTG T  +G++++ SA QGD  L
Sbjct: 197 TPEMYKIYSEKEFTFNGIKQYNRNSLLWDKSLNVDGIKTGHTSDAGYSLITSASQGDMRL 256

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF------YQQNLSNEVPNIS 293
           I+V++G      R   +  LL  GF         +              +   +   N S
Sbjct: 257 ISVVMGTDSERARKVENKKLLKYGFRFYETLTPYHAGDSFVAHRIYMGDRETVDLGINQS 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +   + +  N     +  K  E+     + +  L
Sbjct: 317 TPITIPRGQAANLEANFELDKKLEAPLAKGQVVGTL 352


>gi|289663962|ref|ZP_06485543.1| D-alanyl-D-alanine carboxypeptidase precursor [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 371

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 19  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 78

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 79  REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 138

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 139 AKIGMKDSYFVNAHGLSAEGHHSTAYDLAMLGRAMVRDYPETYAYNKIKEFQVGSIKQSN 198

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 199 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDSSEEQRATDSLALLNW 258

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 259 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 318

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 319 QAPIKQGQQVGTVKVSLDGK 338


>gi|24372747|ref|NP_716789.1| D-alanyl-D-alanine carboxypeptidase [Shewanella oneidensis MR-1]
 gi|24346818|gb|AAN54234.1|AE015560_7 D-alanyl-D-alanine carboxypeptidase [Shewanella oneidensis MR-1]
          Length = 390

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 156/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I ++++       +    A T     Y L+D  +G +IAE       NPASLTK
Sbjct: 8   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISKNA        S    + G T+ + +  + +I++S
Sbjct: 68  MMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQS 127

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ SK LG+  ++F N+HG+    H TTA DMA+L  
Sbjct: 128 GNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSENHKTTAYDMALLGA 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 188 ALIRDVPEEYRIYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 247

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G      R   S  LL+ GF                 QQ    +   +  
Sbjct: 248 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDL 307

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++    +     +  K  ++     E +  L  ++  K
Sbjct: 308 GVATDTPITVSRGRAKDLKANFELTKPLDAPLKKGETVGRLYFQLDGK 355


>gi|319651421|ref|ZP_08005550.1| DacF protein [Bacillus sp. 2_A_57_CT2]
 gi|317396952|gb|EFV77661.1| DacF protein [Bacillus sp. 2_A_57_CT2]
          Length = 387

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 148/352 (42%), Gaps = 17/352 (4%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIAETNKL------PYYTLLDTNTGHVIAENYPDHPWNP 53
           M++ + ++ + +L + IF     A  +            L++ +TG ++ E        P
Sbjct: 1   MKRLVSLMLITLLMATIFVPSGFARESSADLADNVKSAILIERDTGSILYEKNSGEQLPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MT  ++   + E K      I  S+ A+    S    + G  MT    L+ + +
Sbjct: 61  ASMTKVMTMLLIMEAIDEGKLSWDEKIRTSEYAASMGGSQIFLEPGEEMTTKQMLQGIAI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND +VA+AE +  +E+ FV+ MNN +K LGL  T+F N  G+    HY+TA DMAI+
Sbjct: 121 GSGNDASVAMAERIAGSEEAFVEMMNNKAKELGLKNTNFQNPTGLSAKEHYSTAHDMAIM 180

Query: 174 -----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
                 +   TDF      + ++    K     NTN  V  + G DG+KTGFT  + + +
Sbjct: 181 AKELLKYEKITDFTGTYEAY-LREDTDKKFWLVNTNRLVRFYPGVDGLKTGFTSEAKYCL 239

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQN 284
            A+A +    +IAV+ GA     RN     +L   F                     +  
Sbjct: 240 TATAEKDGMRVIAVVFGAPTSKERNAQVTKMLDYAFSQYKTHPMYERNHVLGKVAVSKGE 299

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   SE +    K+  +     ++    ++     +K   +     KK
Sbjct: 300 KKMVEALTSEPISLLTKKGESIEEIEQKVTLNKNIKAPVQKGDQIGTLTLKK 351


>gi|261343387|ref|ZP_05971032.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rustigianii
           DSM 4541]
 gi|282568528|gb|EFB74063.1| D-alanyl-D-alanine carboxypeptidase DacA [Providencia rustigianii
           DSM 4541]
          Length = 401

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 92/339 (27%), Positives = 155/339 (45%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++ +   S       +A       + L+D ++G ++A ++PD   +PASLTK+MT+YV
Sbjct: 17  LSMLVVMSSSAYAAQTPVAPQIDAKAFVLMDYDSGKILASSHPDERLDPASLTKIMTSYV 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           V   +K  K      +T+S+ A                K    +++ +  K ++++S ND
Sbjct: 77  VGQAVKAGKITPQDMVTVSEAAWATGNPVLKGSSLMFLKPKDQVSVLDLNKGIVIQSGND 136

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            ++A+AE +  +++ FV  MN+  + +GL+ THF   HG+   G Y+TARDMA+L+  + 
Sbjct: 137 ASIALAEYVAGSQESFVDLMNSYVQKIGLTNTHFKTVHGLDSEGQYSTARDMAVLAQALI 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N       L  DG+KTG T  +G N+VASA  G  
Sbjct: 197 RDVPDEYILHKEKEFTFNNIRQPNRNRLLWSQNLKVDGVKTGHTSGAGHNLVASATDGPM 256

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNIS 293
            LI+V+LGA     R   S  LL+ GF        I        +  +  ++S     + 
Sbjct: 257 RLISVVLGAPSDKVRFSESEKLLTWGFRFFETVTPIKGDAVLQKQRVWFGDISEVPLGVE 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++V  T  +    N ++    D +S          +   
Sbjct: 317 KDVAVTIPKGQLQNLKVDIKLDSDSLEAPLALNQKVGTI 355


>gi|150390291|ref|YP_001320340.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
 gi|149950153|gb|ABR48681.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
          Length = 387

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/347 (25%), Positives = 152/347 (43%), Gaps = 16/347 (4%)

Query: 2   RQFL------VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++FL      +I+   +  N    L+     +     L+D  TG V+ E        PAS
Sbjct: 4   KKFLKLMSGCLILMTVLALNTTTLLAQPFELQSKAGILIDAATGEVLYEKNIHESLPPAS 63

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  +    L   +  L   + +S+ AS    +    + G   T++  +K + ++S
Sbjct: 64  VTKIMTMLLTMEALDTNRITLNDKVVVSERASSMGGTQLYLEPGEVKTVEELMKGIAIRS 123

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND  VAI E +  +E  FVQ MN  +K LG+  T F+N +G+   GH T+  D+A++S 
Sbjct: 124 ANDACVAIGEHISGSEDAFVQKMNERAKELGMKNTTFINTNGLPAEGHVTSVYDIALMSK 183

Query: 176 RIKTDFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
            +   +P    +       +        ++  NTN  + T+ GA G+KTGFT A+   + 
Sbjct: 184 ELL-KYPDVQKWLTTWMDTVVVGKRESTQELVNTNRLIRTYKGATGLKTGFTQAALHCLS 242

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLS 286
           ASA +G+ + IAV+L A     R   +A LL  GF N    +     +       Q+   
Sbjct: 243 ASATRGNNTFIAVVLAAPTSQVRFSEAAQLLDFGFANYNTIEIAERDVFIGNINIQKGQE 302

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           + V  +++E      +    +   KE    +       K   +   I
Sbjct: 303 SIVRGVAKEDLKVLVKKGEEDQVQKEVILPQFANAPVLKGDKMGEVI 349


>gi|163857632|ref|YP_001631930.1| penicillin-binding protein precursor [Bordetella petrii DSM 12804]
 gi|163261360|emb|CAP43662.1| penicillin-binding protein precursor [Bordetella petrii]
          Length = 371

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 11/336 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M S       +A       + LLD  +G  +A    D    PASLTK+MTAY+VF  L++
Sbjct: 1   MASLASAQAQVAPPVTAKAWMLLDATSGQEMASFNADTRVEPASLTKVMTAYLVFQALRD 60

Query: 72  KKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
            +      +T+S  A +  P  S    + G  +++++ L  L+V+S ND A+ +AE++  
Sbjct: 61  GRLSTQQLVTVSTRAWKVAPGSSKMFLEPGKRVSVNDLLFGLLVQSGNDAAIVLAEAVSG 120

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH-YF 188
           + + FVQ MN  +  +GL  THF + HG+   G Y+TARD+A+L+ R+  D+P     Y 
Sbjct: 121 SVEAFVQRMNQQAAQMGLRDTHFASPHGLPDPGTYSTARDLALLARRLVRDYPDLYKTYD 180

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD----QSLIAVIL 244
             +         PN N  +      DG+KTG T A+G+ ++ASA + D    + LI+V++
Sbjct: 181 SARTFTYNNISQPNRNRLLWLDPSVDGLKTGHTDAAGYCLIASAERPDGQSRRRLISVVM 240

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQ 300
           G      R + S  LL+ GF N    K             ++         ++ +   T 
Sbjct: 241 GTASDKLRTEESRVLLNWGFQNFKTIKLYAKGQAVESPQVWKGERDTVRIGVANDAYITA 300

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                    +   +   +     +++  L+  +  K
Sbjct: 301 PVSAEVKPVVTRRQPLVAPIAAQDQVGSLQVLVDGK 336


>gi|291550443|emb|CBL26705.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus torques L2-14]
          Length = 390

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 154/346 (44%), Gaps = 16/346 (4%)

Query: 1   MRQFLVIIAMAMLSN---IFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   +I + +       FP     +       P   L++ +TG V+ E   D    PA
Sbjct: 6   MKKGFTVILLGVFLLYRIAFPTTVVHAEEVEISAPSGILMEMSTGTVLFEKDADTARPPA 65

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT  ++F  L+     L   ++ S+ A+    S    + G   T+   LK + V 
Sbjct: 66  SVTKIMTMLLIFDALENGTISLDDEVSTSEYAASMGGSQVFLEPGEMQTVGTLLKCISVA 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND  V ++E +C  E++FV+ MN  +K LG+  T+F+N +G+   GH  +ARD+A++S
Sbjct: 126 SANDACVTMSECICGNEQEFVKQMNERAKGLGMKHTNFVNCNGLDADGHEMSARDIALMS 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADGMKTGFTCASGF 226
             + T +PQ   Y  +    I              NTN  +  +  A G+KTG T  + F
Sbjct: 186 RELMTRYPQIKDYCTVWMENITHTTARGSSEFGLTNTNKLIRQYEYATGLKTGSTGKAKF 245

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
            + A+A +    LIAVI+GA D  +R K + +LL+ GF            + +   +   
Sbjct: 246 CVSATASKNGVDLIAVIMGAEDSKSRFKDAVTLLNYGFGKCQIYNAKEQKLPEVLVKGGK 305

Query: 287 NEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +   I  E        E  + +   +  +  +      +K   + 
Sbjct: 306 EDHLKIQYEEGFTYVDTEGSDLSKVEEVTEIPDEVKAPVKKGDTVG 351


>gi|127513867|ref|YP_001095064.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella loihica PV-4]
 gi|126639162|gb|ABO24805.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella loihica PV-4]
          Length = 390

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 91/347 (26%), Positives = 157/347 (45%), Gaps = 12/347 (3%)

Query: 2   RQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +  L++ ++++ +          A       + L+D N+G +IAE       NPASLTK+
Sbjct: 9   KTLLLVSSLSITAANAAPVVTPDAPKVAAKAFILMDYNSGQIIAEENAYESLNPASLTKM 68

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MT+YV+   +K         +TISKNA        S    + G  ++++   + +I++S 
Sbjct: 69  MTSYVIGHEIKVGNISPQDKVTISKNAWSKNFPDSSKMFIEVGKQVSVEELNRGIIIQSG 128

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H TTA DMA+L   
Sbjct: 129 NDACVAMAEHIAGTEDGFVDLMNSWAKQLGMRDSYFENSHGLDSENHKTTAYDMALLGAA 188

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           +  D P+    +  K     G K  N N       L  DG+KTG T  +G+N+V SA + 
Sbjct: 189 LIRDVPEEYRVYSEKSFTYNGIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYNLVTSATKD 248

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPN 291
              L++V+LG    + R   S  LL+ GF                 +  +  +  +    
Sbjct: 249 GMRLVSVVLGTASESARKAESKKLLNYGFRFFETITPYKAGDSFVTQKIWYGDRESVDLG 308

Query: 292 ISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +  +  +  ++ +  N     +  K+  +     E +  +  ++  K
Sbjct: 309 VLTDTPITISRGQAKNLEANYELNKELTAPIAKGETVGRIYFQLNGK 355


>gi|262403437|ref|ZP_06079995.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC586]
 gi|262349941|gb|EEY99076.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC586]
          Length = 389

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 97/344 (28%), Positives = 151/344 (43%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVKFSMACMAFVPTLGFSALSVIPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + GS + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHAQDQVRISNNAWAKKFPDSSKMFIEVGSYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSESAFVSLMNSWAQQLGMNNSSFANPHGLDNPNLYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGQAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  GD  LI+V++G+     R   S  LLS GF              I          NE
Sbjct: 245 ATSGDMRLISVVMGSKSTKIREAESKQLLSYGFRFFETVSPHQKETVIQHQRIWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K  E+     + +  +
Sbjct: 305 VALGSADTIYLTLPRSDVKKLNAVIQLDKTLEAPIAKGDPVGAI 348


>gi|239996931|ref|ZP_04717455.1| D-alanyl-D-alanine carboxypeptidase [Alteromonas macleodii ATCC
           27126]
          Length = 394

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 151/342 (44%), Gaps = 13/342 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FLVI  +   +N       A +     + L D  TGHVIA    D    PASLTK+MT Y
Sbjct: 17  FLVIGTLLHTANAAVVTPPAPSVAAEGFLLTDFETGHVIASKNADMQLAPASLTKIMTIY 76

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           V+   L+     L   +TIS+NA        S    + G+ +++ + L+ ++V+S ND  
Sbjct: 77  VIGKELQAGNISLDDEVTISENAWAKKFPDSSKMFIEVGTQVSVRDLLRGIVVQSGNDAC 136

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E  F   MN  + +LG+S +H++NAHG+    HYTT RDMAILS  +  +
Sbjct: 137 VAMAEHVAGSESAFASMMNAHTASLGMSGSHWVNAHGLHDPDHYTTPRDMAILSRALIAE 196

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    +  K     G K  N N       L  DG+KTG T  +G++++ SA QG   L
Sbjct: 197 TPEMYKIYSEKEFTYNGIKQYNRNSLLWDKSLNVDGIKTGHTSDAGYSLITSAEQGGMRL 256

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEV---PNIS 293
           I+V++G      R   +  LL  GF               +           V    N S
Sbjct: 257 ISVVMGTDSERARKVENKKLLKYGFRFYETLTPYQAGHSFVAHRIYMGDRETVDLGINQS 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +   + +  N     +     E+      K  ++     +
Sbjct: 317 TPITIPRGQAANLEANFELDDKLEAPLA---KGQVVGKLYLQ 355


>gi|154502522|ref|ZP_02039582.1| hypothetical protein RUMGNA_00335 [Ruminococcus gnavus ATCC 29149]
 gi|153796918|gb|EDN79338.1| hypothetical protein RUMGNA_00335 [Ruminococcus gnavus ATCC 29149]
          Length = 401

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 157/366 (42%), Gaps = 31/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS--------------------IAETNKLPYYTLLDTNTGH 40
           M++ L ++  A+LS     +                          + P   L++ +TG 
Sbjct: 1   MKRVLAVLLSAVLSLSVAVVPGIQTLAEEPDAAQKTEGQQEAEVEVQAPSAVLMEASTGA 60

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           V+ E   D    PAS+TK+MT  ++F  L++ K  L   ++ S+ A+    S    + G 
Sbjct: 61  VLYEKDADTRRAPASVTKIMTMLLIFDALEDGKIALEDEVSTSEYAASMGGSQVFLEPGE 120

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
           T ++D  LK + V SAND   A+AE +  +E+ FV+ MN  +  LG+  T F N +G+  
Sbjct: 121 TQSVDTMLKCISVASANDACTAMAEYIAGSEEAFVKMMNERAAGLGMKNTTFQNCNGLDT 180

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLG 212
            GH TTARD+A++S  +   +P+   Y  I    I              NTN  V  +  
Sbjct: 181 EGHLTTARDIALMSRELIEKYPKIHDYCMIWMDTITHTTKKGTSEFGLSNTNKLVRQYPY 240

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           A G+KTG T  + F + A+A +    LIAVIL   +   R + +  LL+ GF      + 
Sbjct: 241 ATGLKTGSTDEAKFCVSATAEKDGMELIAVILSGENSKQRFQDATKLLNYGFGKCQVYED 300

Query: 273 INYII-KDFYQQNLSNEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +    K    Q    E      ++          N     K+A+ K+S     +K   +
Sbjct: 301 NDPPKLKPIEVQGGVKEQILCEYADTFRYLDTSGANLAGVTKKAQMKQSVKAPVKKGQKV 360

Query: 330 KNKITK 335
              + +
Sbjct: 361 GELVYE 366


>gi|300722494|ref|YP_003711784.1| D-alanyl-D-alanine carboxypeptidase [Xenorhabdus nematophila ATCC
           19061]
 gi|297629001|emb|CBJ89586.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Xenorhabdus nematophila ATCC 19061]
          Length = 402

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 156/346 (45%), Gaps = 14/346 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ F V +++  LS++  +              Y L+D  +G ++A N  D   +PASLT
Sbjct: 11  IKSFAVGLSVFWLSSVNVYAMDEPAVPEIDARAYVLMDYYSGKILASNNADERLDPASLT 70

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+MT+YV+   +K  K      +TI K+A                K G  + + +  + +
Sbjct: 71  KMMTSYVIGLAVKSGKISTEDWVTIGKDAWATGNPVLKGSSLMFLKPGDRVKVIDLNRGI 130

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MN  SK LGL+ THF   HG+   G Y+TA DMA
Sbjct: 131 VIQSGNDASIALADYVAGSQDSFVDLMNQYSKTLGLTNTHFKTVHGLDAAGQYSTAHDMA 190

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  +  D P+     + K       + PN N       +  DG+KTG T  +GFN+VA
Sbjct: 191 LLSQAMIRDVPEEYALNKEKEFTFNNIRQPNRNRLLWNKNMNVDGVKTGHTSGAGFNLVA 250

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLS 286
           SA +G   LI+V+LGA     R   S  LLS GF      K +        +  +    S
Sbjct: 251 SATEGPMRLISVVLGAPSDRMRFSDSEKLLSWGFRFYESAKPLKASDTLMTEKVWYGTHS 310

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             V  + ++           N +     ++ S      K  ++   
Sbjct: 311 EAVLGVEKDTSVVVPRGQAGNLKASFTLNQASLEAPLTKNQVVGTV 356


>gi|284009241|emb|CBA76342.1| penicillin-binding protein [Arsenophonus nasoniae]
          Length = 418

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 92/349 (26%), Positives = 155/349 (44%), Gaps = 20/349 (5%)

Query: 4   FLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
            ++I ++   S +F           +  A       Y L+D  +G V+AE   D   +PA
Sbjct: 28  LILITSLIFSSTLFANSNNAMQINVIPSAPNIDAEAYILIDYYSGKVLAERNADQRRDPA 87

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTK+MT+Y++   +K  K  +   +TI +NA                K G  +++   +
Sbjct: 88  SLTKMMTSYIIGQTIKAGKISMNDIVTIDENAWATGNPVFKGSSLMFLKPGDRVSVSQLI 147

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + + ++S ND  VA+AE +   E  FV+ MN+  + LGL  THF+  HG+   G Y++AR
Sbjct: 148 RGINLQSGNDACVAMAEYVAGDEASFVKLMNDNVQRLGLKNTHFLTVHGLDADGQYSSAR 207

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           DMA++   +  D P+    ++ K       +  N N       L  DG+KTG T A+G+N
Sbjct: 208 DMALIGQALIRDVPEEYAIYKEKEFTFNKIRQLNRNGLLWDKSLNVDGIKTGHTSAAGYN 267

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQ 283
           +VASA +G+  LI+VILG      R+  S  LL+ GF      K +   ++      +  
Sbjct: 268 LVASATEGNMRLISVILGGHSSKGRDAESKKLLTWGFRFFETVKPLQGGMEFASQPVWFA 327

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           N       I +++          + +     +         K  ++   
Sbjct: 328 NTDQVKLGIEKDLYLIIPRGRMKDLKASYTLNNTELQAPLAKNQIVGTI 376


>gi|288549405|ref|ZP_06390668.1| hypothetical protein ENTCAN_05367 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318989|gb|EFC57927.1| D-alanyl-D-alanine carboxypeptidase DacA [Enterobacter cancerogenus
           ATCC 35316]
          Length = 408

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 147/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+ +    L         A       + L+D  +G V+AE   D   +PASLTKLMT+YV
Sbjct: 24  LLFLFAPTLYAAEQAAPEAPPVDARAWILMDYASGKVLAEGNADEKLDPASLTKLMTSYV 83

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  L   +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 84  VGQALKAGKIKLDDMVTVGKDAWATGNPALRGSSVMFLKPGDRVSVSDLNKGVIIQSGND 143

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  ++  F+  MN  ++ LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 144 ACIALADYVAGSQDSFIGLMNGYAQRLGLTNTTFKTVHGLDAPGQFSTARDMALLGKALI 203

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P+     + K       + PN N     + +  DGMKTG T  +G+N+VASA QGD 
Sbjct: 204 HDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNVNVDGMKTGTTAGAGYNLVASATQGDM 263

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LG      R   S  LL+ GF        I      I +  +  +  +      
Sbjct: 264 RLISVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFISQRVWFGDKRDVNLGAG 323

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E    T       N +              +K  ++   
Sbjct: 324 EAGSVTIPHGQLKNLKASYTLTDPQLTAPLKKGQVVGTI 362


>gi|90414079|ref|ZP_01222062.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum 3TCK]
 gi|90324874|gb|EAS41402.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum 3TCK]
          Length = 391

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 90/323 (27%), Positives = 149/323 (46%), Gaps = 9/323 (2%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
             +  A       Y L+D N+G +IAEN  D   +PASLTK++T+YV+   +K     L 
Sbjct: 28  TVVPEAPQIAAKAYILMDYNSGKIIAENNSDERLHPASLTKMLTSYVIGQEIKSGNISLD 87

Query: 78  TPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             +++S NA        S    + G  +T+    K +I++S ND   A+AE +  +   F
Sbjct: 88  DKVSVSNNAWAKNFPGSSKMFLEPGKLVTVQELNKGIIIQSGNDACTAMAEHIAGSTDSF 147

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V+ MN  +K +G+ ++HF+N HG+    H++TA DMA L+  +  D P     ++ K   
Sbjct: 148 VELMNAWAKRIGMESSHFVNVHGLDNDDHFSTAHDMATLAQAVIRDVPDEYAIYKEKSFT 207

Query: 195 IKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
             G    N N       L  DGMKTG T  +G+++VASA +G+  LI+V++G    N R 
Sbjct: 208 YNGITQYNRNGLLWDKSLNVDGMKTGHTDQAGYSLVASAYEGEMRLISVVMGTKSANARK 267

Query: 254 KVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF               + +  +  ++      ++E+   T       + +
Sbjct: 268 AESKKLLNYGFRFFETVTPHKANETFVTEKVWMGDIDQVNLGVTEDTFVTLPRGQTKDLK 327

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                +KE       K  ++   
Sbjct: 328 ASFVLEKE-LKAPIAKGDIVGKL 349


>gi|88860565|ref|ZP_01135203.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Pseudoalteromonas tunicata D2]
 gi|88817763|gb|EAR27580.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Pseudoalteromonas tunicata D2]
          Length = 387

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 151/338 (44%), Gaps = 9/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  + + S     +          Y L+D  TG VIAE  PD    PASLTK+MT+YV+
Sbjct: 15  LVCTVGIFSASAQIMPAPPQVNAKGYFLVDFTTGKVIAEGAPDERLAPASLTKMMTSYVI 74

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K K       +T+S+ A        S    + G  ++++   + +I++S ND  VA
Sbjct: 75  GLEIKNKNISPNDLVTVSEKAWSKNFPDSSKMFIEVGKKISVEELNRGIIIQSGNDACVA 134

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  F   MN  ++ LG++ THF+N+HG+    H+TT RDMA L   +  D P
Sbjct: 135 MAEHIAGSESAFADLMNAHAEKLGMTNTHFINSHGLDTDEHFTTPRDMATLGGALIRDVP 194

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +  K     G K  N N       L  DG+KTG T  +G+++V SA +GD  L+A
Sbjct: 195 DEYAIYSEKSFTFNGIKQYNRNSLLWDESLDVDGIKTGHTSEAGYSLVTSATKGDMRLVA 254

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVC 297
           V++G      R   S  LL+ GF                 +  +  N       I ++  
Sbjct: 255 VVMGTESDRARRAESKKLLNYGFRFYETITPYKAGDTFAKQRVWMGNKEEVALGILQDTP 314

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            T +   + N +     DK +      K T++     +
Sbjct: 315 ITIQRGQSKNLKANFKLDK-TLEAPIAKGTVVGTLFLQ 351


>gi|113969331|ref|YP_733124.1| penicillin-binding protein 6 [Shewanella sp. MR-4]
 gi|117919440|ref|YP_868632.1| penicillin-binding protein 6 [Shewanella sp. ANA-3]
 gi|113884015|gb|ABI38067.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella sp. MR-4]
 gi|117611772|gb|ABK47226.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella sp. ANA-3]
          Length = 391

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I ++++       +    A T     Y L+D  +G +IAE       NPASLTK
Sbjct: 9   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISKNA        S    + G T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H +TA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENSHGLDSENHKSTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDVPEEYRVYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G      R   S  LL+ GF                 QQ    +   +  
Sbjct: 249 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDL 308

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++    +     +  K  ++     E +  L  ++  K
Sbjct: 309 GVATDTPITISRGRAKDLKANFELTKPLDAPLKKGETVGRLYFQLDGK 356


>gi|311107988|ref|YP_003980841.1| D-alanyl-D-alanine carboxypeptidase [Achromobacter xylosoxidans A8]
 gi|310762677|gb|ADP18126.1| D-alanyl-D-alanine carboxypeptidase DacC 1 [Achromobacter
           xylosoxidans A8]
          Length = 386

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 98/349 (28%), Positives = 158/349 (45%), Gaps = 13/349 (3%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++    +I+A A +S        A       + LLD  +G VIA +       PASLTK
Sbjct: 3   MKKLAASLIVAAACMSGAMAQTVPAPALSAKAWLLLDETSGQVIASHAATTRIEPASLTK 62

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSA 116
           +MTAYVVF  L +K+   T  +T+S  A + P   S    + GS +++D+ L+ L+++S 
Sbjct: 63  IMTAYVVFEALSKKELSATQLVTVSTRAWKVPAGSSKMFLEPGSKVSVDDLLRGLMIQSG 122

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+A+AE++  + + FV  MN+T+  LGL AT F + HG+     Y+TA D++IL+ R
Sbjct: 123 NDAAIALAEAVSGSVEAFVARMNDTAARLGLHATRFASPHGLPDPETYSTASDLSILATR 182

Query: 177 IKTDFPQYMH-YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ- 234
              D+PQ    Y   K         PN N  +      DG+KTG T ++G+ IVA+A + 
Sbjct: 183 FIRDYPQLYKTYDSAKQFTFNKITQPNRNRLLWLDPSVDGLKTGHTESAGYCIVATAQRP 242

Query: 235 ---GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSN 287
                + LI V++G      R + S  LL  GF      K           + ++    +
Sbjct: 243 NGADQRRLITVVVGTASDKLRTQESRELLEWGFQGFNTIKLYARGQAVATPEVWKGEQDS 302

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                + +   T                  +       +  ++  +  K
Sbjct: 303 LKAGFARDAYVTVPAGAKVEPVWTPQDPLIAPIAAQSAVGAVRVLVDGK 351


>gi|167772329|ref|ZP_02444382.1| hypothetical protein ANACOL_03706 [Anaerotruncus colihominis DSM
           17241]
 gi|167665432|gb|EDS09562.1| hypothetical protein ANACOL_03706 [Anaerotruncus colihominis DSM
           17241]
          Length = 391

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 92/313 (29%), Positives = 144/313 (46%), Gaps = 3/313 (0%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L++ +TG V+ E   D    PAS+TK+MT  +V   L   +  L   +T S+
Sbjct: 42  SLPARSAILIEQSTGRVLFEKNADEQLPPASITKVMTLLLVMEALDSGQIALGDMVTCSE 101

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A     S   FK G  +++D+ LK   + SAND +VA+AE +  +E+ FV  MN  +  
Sbjct: 102 HAQSMGGSQIWFKAGEQLSVDDLLKAAAISSANDASVALAEHVAGSEEAFVALMNEKAAQ 161

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWR-IKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           LG++ THF+NA G+   GH TTARD+A +S   +            +  L     +  NT
Sbjct: 162 LGMTNTHFVNATGLDADGHLTTARDIAAMSRALLAYPKITEYSGTWMSELRGGATQLVNT 221

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  V  + G  G+KTG T  +G  + ASA +G  SLIAV LG+     R   +  LL  G
Sbjct: 222 NKLVRFYDGCTGLKTGTTDGAGSCLSASATRGGLSLIAVTLGSPTSAERFSAARGLLDYG 281

Query: 264 FYNKTDRKK--INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
           F N T  +   +  +     +  ++ +V  +SE          + +   ++         
Sbjct: 282 FANYTRVELPPLEELAPVPVRGGVAPQVGVLSETPGYVIVRTADKDAVKQDVTLLPDVQA 341

Query: 322 DFEKITLLKNKIT 334
             E   LL   + 
Sbjct: 342 PVETGQLLGRVVV 354


>gi|58583579|ref|YP_202595.1| penicillin-binding protein 6 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625391|ref|YP_452763.1| penicillin-binding protein 6 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575165|ref|YP_001912094.1| penicillin-binding protein 6 [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428173|gb|AAW77210.1| penicillin-binding protein 6 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369331|dbj|BAE70489.1| penicillin-binding protein 6 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519617|gb|ACD57562.1| penicillin-binding protein 6 [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 401

 Score =  209 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN  +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNTYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH+++A D+A+L   +  D+P    Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSSAYDLAMLGRAMVRDYPDTYAYNKIKEFQVGSIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA + DQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRDDQRLIAVVMGDSSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|332289415|ref|YP_004420267.1| D-alanyl-D-alanine carboxypeptidase fraction A [Gallibacterium
           anatis UMN179]
 gi|330432311|gb|AEC17370.1| D-alanyl-D-alanine carboxypeptidase fraction A [Gallibacterium
           anatis UMN179]
          Length = 394

 Score =  209 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 89/348 (25%), Positives = 149/348 (42%), Gaps = 13/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +++      +   S    F                Y L+D N+G V+A   PD    PAS
Sbjct: 8   LKKLAFAGLLGFSSISVAFAEGLYDIAPPQINAQTYILMDYNSGAVLAALNPDQKHYPAS 67

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLI 112
           LTK+MT+YV+   LKE +   T  +TI + +        S         +++ +  + +I
Sbjct: 68  LTKMMTSYVIGQALKEGRIHNTDMVTIDEESWGKNFPGSSKMFLNVNQQVSVADLNRGII 127

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  VA+A+ L  ++  F+  MN      GL  THF   HG+     Y+T+RDMA+
Sbjct: 128 IASGNDACVAMAKYLAGSQANFINMMNQYVDQFGLKNTHFETVHGLDHENQYSTSRDMAL 187

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           +  RI  D P+  H +  K       K PN N       L  DG+KTG T  +G+N+VAS
Sbjct: 188 IGARIIRDLPEEYHIYAEKEFTFNNIKQPNRNGLLWDKNLTVDGLKTGHTDEAGYNLVAS 247

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSN 287
           A+  +  LI+V++G      R   S  LL  GF N  + K +        +  Y      
Sbjct: 248 AVNNNMRLISVVMGVNSFKGREIESKKLLQWGFANFENVKPLAANQVVSEQPVYYGKEGK 307

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                  +V     +  +   + +   +++      ++  ++ + + +
Sbjct: 308 IKLGTLSDVYLVIPKGKSQAVKARYQLNQKFLEAPLKQGQVVGSIVYQ 355


>gi|325929151|ref|ZP_08190294.1| penicillin-binding protein 6 [Xanthomonas perforans 91-118]
 gi|325540470|gb|EGD12069.1| penicillin-binding protein 6 [Xanthomonas perforans 91-118]
          Length = 401

 Score =  209 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSTAYDLALLGRAMVRDYPETYAYNKIKEFQVGTIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDSAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDSSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|225374869|ref|ZP_03752090.1| hypothetical protein ROSEINA2194_00492 [Roseburia inulinivorans DSM
           16841]
 gi|225213252|gb|EEG95606.1| hypothetical protein ROSEINA2194_00492 [Roseburia inulinivorans DSM
           16841]
          Length = 421

 Score =  209 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 11/333 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           S      S       P   L++ +TG ++ E        PAS+TK+MT  ++F  ++  +
Sbjct: 54  STPAADSSDVLNLSAPSVLLMEASTGTILYEKNSHTVLRPASITKIMTLILIFDAIESGQ 113

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   +T+S+ A+    S    +   T T+D  +K + + SAND  VA+AE +C +E  
Sbjct: 114 ISLEDTVTVSEYAASMGGSQVFLEPNETQTVDTMIKCISIASANDACVAMAEFICGSEAA 173

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV+ MN  +K LG++ T F+N  G+   GH T+A D+A++S  + T +PQ   Y  I   
Sbjct: 174 FVEKMNERAKGLGMNDTTFVNCCGLDVDGHMTSAYDVALMSRELTTKYPQIHDYSTIWMD 233

Query: 194 EIKGKK--------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            I              NTN  +  +  A G+KTG T  + + + A+A++    LIAV++ 
Sbjct: 234 TITHVTRRGSEEFGLTNTNKLIRQYQYATGLKTGSTSLAKYCVSATAVKDGMELIAVVMA 293

Query: 246 ALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           A D   R   +A+LL+ GF      +D            +                   +
Sbjct: 294 APDFKIRFADAATLLNYGFSKCRIYSDENTDTLAALPLKKGISDEVSLCYRSPFQYVVTD 353

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             + +   KE +  ES         ++   + K
Sbjct: 354 GSDLSGITKELELPESVEAPVASGDVIGRAVYK 386


>gi|261825019|pdb|3IT9|A Chain A, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Apo State
 gi|261825020|pdb|3IT9|B Chain B, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Apo State
 gi|261825021|pdb|3IT9|C Chain C, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Apo State
 gi|261825022|pdb|3IT9|D Chain D, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Apo State
 gi|261825023|pdb|3ITA|A Chain A, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Acyl-Enzyme Complex With Ampicillin
 gi|261825024|pdb|3ITA|B Chain B, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Acyl-Enzyme Complex With Ampicillin
 gi|261825025|pdb|3ITA|C Chain C, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Acyl-Enzyme Complex With Ampicillin
 gi|261825026|pdb|3ITA|D Chain D, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Acyl-Enzyme Complex With Ampicillin
 gi|261825027|pdb|3ITB|A Chain A, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Complex With A Substrate Fragment
 gi|261825028|pdb|3ITB|B Chain B, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Complex With A Substrate Fragment
 gi|261825029|pdb|3ITB|C Chain C, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Complex With A Substrate Fragment
 gi|261825030|pdb|3ITB|D Chain D, Crystal Structure Of Penicillin-Binding Protein 6 (Pbp6)
           From E. Coli In Complex With A Substrate Fragment
          Length = 352

 Score =  209 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 148/325 (45%), Gaps = 11/325 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV   LK  K  LT 
Sbjct: 4   QTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTD 63

Query: 79  PITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +T+ K+A                K G  +++ +  K +I++S ND  +A+A+ +  +++
Sbjct: 64  MVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQE 123

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  D P+     + K 
Sbjct: 124 SFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKE 183

Query: 193 LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 + PN N     + L  DGMKTG T  +G+N+VASA QGD  LI+V+LGA     
Sbjct: 184 FTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI 243

Query: 252 RNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R   S  LL+ GF        I      + +  +  + S       E    T       N
Sbjct: 244 RFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKN 303

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +      +       +K  ++   
Sbjct: 304 LKASYTLTEPQLTAPLKKGQVVGTI 328


>gi|258623181|ref|ZP_05718190.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM573]
 gi|258625506|ref|ZP_05720398.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM603]
 gi|258582212|gb|EEW07069.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM603]
 gi|258584479|gb|EEW09219.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM573]
          Length = 413

 Score =  209 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 143/346 (41%), Gaps = 14/346 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FL  ++MA       +  +               Y L+D +TG ++ E       NPAS
Sbjct: 29  KFLFRLSMACMAFVPTLGFSALTITPEPPQLAANGYVLIDYHTGKILVERNAHQKLNPAS 88

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMTAYV    +K         + IS NA        S    + GS + L +  + LI
Sbjct: 89  LTKLMTAYVAGQEMKRGNIHAEDQVRISNNAWAKKFPDSSKMFIEVGSYVNLMDLYRGLI 148

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 149 VQSGNDASVAIAEHVAGSESAFVSLMNSWAQQLGMNNSSFANPHGLDDSNLYSTPYDIAL 208

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P     +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 209 LGQAIIRDLPDIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 268

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+     R   S  LLS GF              I          NE
Sbjct: 269 ATSGEMRLISVVMGSKSVKIREAESKQLLSYGFRFFETVSPHQKESVIQSQRIWYGDKNE 328

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           V   S +         +        +  ++      K  ++   + 
Sbjct: 329 VALGSADTVYLTLPRNDVKKLNAVIQLDKTLEAPVAKGDVVGAILY 374


>gi|262164351|ref|ZP_06032089.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM223]
 gi|262026731|gb|EEY45398.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM223]
          Length = 389

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 93/346 (26%), Positives = 142/346 (41%), Gaps = 14/346 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FL   +MA       +  +               Y L+D +TG ++ E       NPAS
Sbjct: 5   KFLFRFSMACMAFVPTLGFSALTITPEPPQLAANGYVLIDYHTGKILVERNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMTAYV    +K         + IS NA        S    + GS + L +  + LI
Sbjct: 65  LTKLMTAYVAGQEMKRGNIHAEDQVRISNNAWAKKFPDSSKMFIEVGSYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSESAFVSLMNSWAQQLGMNNSSFANPHGLDDSNLYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P     +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGQAIIRDLPDIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+     R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKIREAESKQLLSYGFRFFETVSPHQKESVIQSQRIWYGDKNE 304

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           V   S +         +        +  ++      K  ++   + 
Sbjct: 305 VALGSADTVYLTLPRNDVKKLNAVIQLDKTLEAPVAKGDVVGAILY 350


>gi|121591022|ref|ZP_01678339.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 2740-80]
 gi|121547132|gb|EAX57264.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 2740-80]
          Length = 386

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDVVGTLYYQ 353


>gi|146310988|ref|YP_001176062.1| D-alanyl-D-alanine carboxypeptidase fraction C [Enterobacter sp.
           638]
 gi|145317864|gb|ABP60011.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Enterobacter sp. 638]
          Length = 400

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 96/339 (28%), Positives = 147/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+ +    L         A       + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 17  LLFLFSPTLYAAEQAAPEAPPVDARAWILMDYASGKVLAEGNADEQLDPASLTKIMTSYV 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  L   +TI K+A                K G  +++ +  K +I++S ND
Sbjct: 77  VGQALKAGKIKLDDMVTIGKDAWATGNPALRGSSVMFLKPGDQVSVSDLNKGVIIQSGND 136

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  ++  F+  MN  ++ LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 137 ACIALADYVAGSQDSFIGLMNGYAQRLGLTKTTFKTVHGLDAPGQFSTARDMALLGKALI 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P+     + K       + PN N     + +  DGMKTG T  +G+N+VASA QGD 
Sbjct: 197 HDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNVNVDGMKTGTTAGAGYNLVASATQGDM 256

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LG      R   S  LL+ GF        I      I +  +  + S       
Sbjct: 257 RLISVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFISQRVWFGDKSEVNLGAG 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E    T       N +              +K  ++   
Sbjct: 317 EAGSVTIPRGQLKNLKASYTLTDPQLTAPLKKGQVVGTI 355


>gi|114046558|ref|YP_737108.1| penicillin-binding protein 6 [Shewanella sp. MR-7]
 gi|113888000|gb|ABI42051.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella sp. MR-7]
          Length = 391

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I ++++       +    A T     Y L+D  +G +IAE       NPASLTK
Sbjct: 9   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISKNA        S    + G T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSPDDDVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H +TA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENSHGLDAENHKSTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDVPEEYRVYSEKYYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G      R   S  LL+ GF                 QQ    +   +  
Sbjct: 249 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDL 308

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++    +     +  K  ++     E +  L  ++  K
Sbjct: 309 GVATDTPITISRGRAKDLKANFELTKPLDAPLKKGETVGRLYFQLDGK 356


>gi|291613195|ref|YP_003523352.1| beta-lactamase [Sideroxydans lithotrophicus ES-1]
 gi|291583307|gb|ADE10965.1| Beta-lactamase [Sideroxydans lithotrophicus ES-1]
          Length = 419

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 11/342 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPF----LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ L+ +   + +  F       S         Y L D  +G  + E   +    PA L
Sbjct: 41  MKRALIFLFALLPTLAFSQEQEQSSSPPILAANSYALYDYTSGQFLVEQNANAHIPPAQL 100

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP--PSNSTFKKGSTMTLDNALKLLIVK 114
           TKLMTAYVVFS +K+ K  LT  +  S  A+             G  ++++  L+ LIV+
Sbjct: 101 TKLMTAYVVFSAIKQGKLSLTRKLLPSAYATRMQNDEPRMYLTAGKEVSVEELLRGLIVQ 160

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND A  +AE+L   E      MNN ++ LGL  THF+NA G     HY++A D+A+++
Sbjct: 161 SANDAARVLAETLANHEMALADAMNNEAQQLGLKDTHFVNATGTPDAQHYSSAHDLALIA 220

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  DFP+Y H +  +  +  G    N N  +      DG+ TG   +  F +VASA +
Sbjct: 221 AALVRDFPEYYHIYSQREYQYNGINQFNRNRLLWMDPFVDGLATGNNESEEFYMVASAKR 280

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVP 290
            ++ LI+V++G      R+  S  LL+ GF +    +          K  ++        
Sbjct: 281 DERRLISVVIGTATEKLRSSESQRLLNYGFQDFEAIRLYAKDQLVSSKYVWKGTAKEVEI 340

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               +   T  +    +      + K+      ++   +   
Sbjct: 341 GFRADRYITIPKGRR-DALKATLETKQPILAPIDRGQQIGTL 381


>gi|258621965|ref|ZP_05716994.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM573]
 gi|258585718|gb|EEW10438.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM573]
          Length = 391

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFLV--------IIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ ++         +++ + S  F     +  A       Y L+D ++G V+AE   + 
Sbjct: 1   MKKSILKSVLASSVTLSITLSSTAFASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFIEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  +E  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGSEDAFVDLMNAWASSLGMKDSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +KE      +K  ++     +
Sbjct: 301 MGDKDTVALGVDKDTYVTLPRGQAKDLTASFVLEKE-LKAPLKKGDVVGTLYYQ 353


>gi|332982023|ref|YP_004463464.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mahella australiensis
           50-1 BON]
 gi|332699701|gb|AEE96642.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mahella australiensis
           50-1 BON]
          Length = 394

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 158/354 (44%), Gaps = 21/354 (5%)

Query: 3   QFLVIIAMAMLSNIF----------------PFLSIAETNKLPYYTLLDTNTGHVIAENY 46
            F+V + +A+L+  F                P        +     L+D  TG ++ E  
Sbjct: 9   IFIVSLCLALLNGAFIGNIAAAHEPNEQDEQPASEDPLKLQSKSAVLMDAATGQLLYEKN 68

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
                  AS+TK+MT  ++   L   +   T  + +SK+A+    S    ++G  MT+D 
Sbjct: 69  AHEKLPIASITKIMTMDLIMEALDSGRIKPTDVVRVSKDAASLGGSQIWLEEGEEMTVDE 128

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            +K + V SAND A A+AE +  T++ FV+ MN  +K+LG++ T+F N HG+    HY++
Sbjct: 129 MMKAIAVNSANDAAAAMAEYIAGTQENFVKMMNEKAKSLGMNDTNFANVHGLDDDNHYSS 188

Query: 167 ARDMAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           A D+A++S  +   D         +  L        NTN  + T+ GADG+KTG T  + 
Sbjct: 189 AYDVALMSRELAKHDGIFKYTSIWMDTLRDGETNLANTNKLIRTY-GADGLKTGSTDKAK 247

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQ 282
           + I A+A + D  LIAVILG      R   +A LL  GF   T  + +            
Sbjct: 248 YCISATAKKDDMRLIAVILGGPTSQVRFDEAAKLLDYGFNTFTINRIVKKGEIIRNIRVT 307

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +  S++V  I+ +  +   +  +  +  K  +  E+      +   +      K
Sbjct: 308 RGKSDQVNGIAADDLSVLTKKTDTASIEKRIELPETIEAPVVESQKIGKLTALK 361


>gi|291484778|dbj|BAI85853.1| penicillin-binding protein [Bacillus subtilis subsp. natto BEST195]
          Length = 389

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 90/353 (25%), Positives = 158/353 (44%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + + ++   F   + A+          ++     L++ +TG V+     +   
Sbjct: 1   MKRLLSTLLIGIMLLTFAPSAFAKQDGKRTSELAHEAKSAVLIERDTGKVLYNKNSNERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L + K  ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDKGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FV+ MN  +K LGL  T F N  G+ + GHY++A DMA
Sbjct: 121 AIASGNDASVAMAEFISGSEEEFVKKMNKKAKELGLKNTSFKNPTGLTEEGHYSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           I++  +            +   ++    K     NTN  +  + G DG+KTG+T  + + 
Sbjct: 181 IMAKELLKYESITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGYTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           + ASA +G+   IAV+ GA     RN     +L   F                  +    
Sbjct: 241 LTASAKKGNMRAIAVVFGASTPKERNAQVTKMLDFAFSQYETHPLYKRNQTVAKVKVKKG 300

Query: 288 EVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   I    SE +    K+  + N   KE K K++     +K   L   + KK
Sbjct: 301 KQKLIELTTSEPISILTKKGEDMNDVKKEIKMKDNISAPIQKGQELGTLVLKK 353


>gi|288934486|ref|YP_003438545.1| beta-lactamase [Klebsiella variicola At-22]
 gi|290508688|ref|ZP_06548059.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella sp. 1_1_55]
 gi|288889195|gb|ADC57513.1| Beta-lactamase [Klebsiella variicola At-22]
 gi|289778082|gb|EFD86079.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella sp. 1_1_55]
          Length = 387

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 144/350 (41%), Gaps = 18/350 (5%)

Query: 1   MR-QFLVIIAMAMLSNI------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+ +  + +++   S        FP        +   + L+D  TG V+         NP
Sbjct: 1   MKGRLFIAVSLLASSVSCAFAVDFPATVAPPAIQAGSWVLMDYTTGQVLTAGNEHQQRNP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTKLMT YVV   +   +      +T+ K+A                K G  +++ + 
Sbjct: 61  ASLTKLMTGYVVDRAIDSHRITFDDIVTVGKDAWAKGNPVFDGSSLMFLKPGDRVSVRDL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            + LIV S ND  VA+A+ +   + +FV  MN   + L L  THF   HG+   G +++A
Sbjct: 121 SRGLIVDSGNDACVALADYVAGGQPQFVALMNQYVEKLHLQDTHFETVHGLDAPGQHSSA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGF 226
            D+A+LS  I    P   H +  K L   G    N N       +  DG+KTG T  +GF
Sbjct: 181 YDLAVLSRAIIHGEPDVYHMYSQKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGF 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQ 282
           N++ASA+ G + LIAV++GA     R + +A LL  G  N    + +    K      + 
Sbjct: 241 NLIASAVDGQRRLIAVVMGADSPKGREQQAAKLLHWGQQNFDTVQVLQKGQKVGTERIWY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +         ++      +      + K   DK+           +   
Sbjct: 301 GDKEQIKLGTDQDFWLALPKAEVSRIKAKYVLDKKDLEAPIAANQRVGEI 350


>gi|325915034|ref|ZP_08177363.1| penicillin-binding protein 6 [Xanthomonas vesicatoria ATCC 35937]
 gi|325538732|gb|EGD10399.1| penicillin-binding protein 6 [Xanthomonas vesicatoria ATCC 35937]
          Length = 401

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKNSYFVNAHGLSAEGHHSTAYDLAMLGRAMVRDYPETYAYNKIKEFQVGSIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDTSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+ AK+ 
Sbjct: 289 GFRFFETHGLYAPGKVVTKQKVWKGAQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVAKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           E+     +++  +K  +  K
Sbjct: 349 EAPIKKGQQVGTVKVSLDGK 368


>gi|261212803|ref|ZP_05927087.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC341]
 gi|260837868|gb|EEX64545.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC341]
          Length = 378

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 139/337 (41%), Gaps = 9/337 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +     +  +    +          Y L+D +TG V+ E+      NPASLTKLMT+YV 
Sbjct: 4   MAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVA 63

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K         + IS NA        S    + G+ + L +  + LIV+S ND +VA
Sbjct: 64  GQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVA 123

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           IAE +  +E  FV  MN+ +  LG++ + F N HG+     Y+T  D+A+L   I  D P
Sbjct: 124 IAEHVAGSEGAFVSLMNSWALQLGMNNSSFANPHGLDNPNLYSTPYDIALLGQAIIRDLP 183

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +    +        G    N N       +  DGMKTG+T  +G+++ +SA  G+  LI+
Sbjct: 184 EIYTLYSEPSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLIS 243

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVC 297
           V++GA     R   S  LLS GF                    +  N +       E V 
Sbjct: 244 VVMGAKSVKIREAESKQLLSYGFRFFETVSPHQKDSVVQSQRIWYGNKNEVALGSKETVY 303

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            T               DK +      K  L+ + + 
Sbjct: 304 LTLPRNDVKKLNAVIELDK-TLEAPINKGDLVGSILY 339


>gi|119775724|ref|YP_928464.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella amazonensis
           SB2B]
 gi|119768224|gb|ABM00795.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella amazonensis SB2B]
          Length = 392

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 159/343 (46%), Gaps = 10/343 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L I++ +  +     +  A +     Y L+D +TG +IAE +     NPASLTK+MT+Y
Sbjct: 15  LLAIMSASAFAAPPTVVPDAPSVAAKAYVLMDYHTGQIIAEEHAYEQLNPASLTKMMTSY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           V+   +K         +TI+KNA        S    + G T+   +  + +I++S ND  
Sbjct: 75  VIGHEMKVGNISPEDDVTITKNAWSKNFPDSSKMFIEVGKTVKAADLNRGIIIQSGNDAC 134

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  TE  FV  MN+ +K LG++ ++F N+HG+    H TTA DMAIL   +  D
Sbjct: 135 VAMAEHIAGTEDAFVDMMNSWAKQLGMTDSYFENSHGLDSDNHKTTAYDMAILGAALIRD 194

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    +  K     G K  N N       +  DG+KTG T  +G+N+VASA Q D  L
Sbjct: 195 VPEEYRIYSEKEFTFNGIKQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVASATQDDMRL 254

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           I+V++GA    +R   S  LLS GF                 +  +  +  +    ++ +
Sbjct: 255 ISVVMGASSEASRKAESKKLLSYGFRFFETVTPYKAGDSFVNQQIWYGDRESVDLGVATD 314

Query: 296 --VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +   + +        +  K  E+     E +  +  ++  K
Sbjct: 315 TPLTIRRGKGKELQANFELTKPLEAPLAKGEVVGRVYFQLDGK 357


>gi|90415028|ref|ZP_01222988.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum 3TCK]
 gi|90323842|gb|EAS40448.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum 3TCK]
          Length = 393

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/335 (26%), Positives = 156/335 (46%), Gaps = 11/335 (3%)

Query: 6   VIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           V +++++ +   P +   A       Y L+D NTG V+ E   +   NPASLTKLMT+YV
Sbjct: 17  VFLSLSLPALAVPTVVPDAPVLGAKGYVLMDYNTGRVLVEKNANVKLNPASLTKLMTSYV 76

Query: 65  VFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
               +K         + IS+NA        S    + G+ +++ +  + LI++S ND +V
Sbjct: 77  AGQEMKRGNISQDDIVVISRNAWARNFSDSSKMFIEVGTEVSMMDLYRGLIIQSGNDASV 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AIAE +  ++  FV  MN+ +KNLG++ + F NAHG+     Y+T  D+A+L   +  D 
Sbjct: 137 AIAEHVAGSQDAFVGLMNSWAKNLGMNNSQFANAHGLDNPNLYSTPYDIALLGQALIKDL 196

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P     +  +          N N  +G      DGMKTG+T  +G+++ +SA QG+  LI
Sbjct: 197 PDLYPLYSERSFTYNNITQRNRNGLLGDKSINVDGMKTGYTGGAGYSLASSATQGNMRLI 256

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE- 295
           +V++G+    +R   S  LL+ GF   +         +      +  N       +  + 
Sbjct: 257 SVVMGSSSTKSREAESKQLLNYGFRFFSTISPHKKGQEVLSERIWMGNSDTISLGVENDT 316

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            V  ++ +       ++  KD  +     + +  +
Sbjct: 317 YVTLSRNDAKKVTANIELTKDLMAPLAIGDNVGSI 351


>gi|119470843|ref|ZP_01613454.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Alteromonadales bacterium TW-7]
 gi|119446070|gb|EAW27349.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Alteromonadales bacterium TW-7]
          Length = 390

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 10/334 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++ + A+ S     +          Y L+D  TG VIAE   D    PASLTK+MT+YV+
Sbjct: 18  LVCSAAVFSASAQIIPAPPQVNAKGYFLVDFTTGKVIAEGEADTKLAPASLTKMMTSYVI 77

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            + +K      T  +TIS+ A        S    + G  +++D     +I++S ND  VA
Sbjct: 78  GTEIKVGNIAPTDMVTISEKAWAKNFPESSKMFIEVGKQISVDELNHGIIIQSGNDACVA 137

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           ++E +  +E  F   MN  +  LG++ +HF+N+HG+    HYTT RDMA LS  +  D P
Sbjct: 138 MSEHIAGSESAFADLMNAHAAKLGMTNSHFINSHGLDTDEHYTTPRDMATLSAALIRDVP 197

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +    ++ K     G K  N N       L  DG+KTG T  +G+++V SA +    LIA
Sbjct: 198 EEYAIYKEKSYTYNGIKQYNRNSLLWDESLDVDGIKTGHTSEAGYSLVTSATKNGMRLIA 257

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE-- 295
           V++G      R   S  LL+ GF                 +  +  N  N    I E+  
Sbjct: 258 VVMGTSSERARKVESKKLLNYGFRFFETITPYKAGDSFAEQRIWMGNKENVSLGILEDTP 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +   + +  N     +     E+      K+  L
Sbjct: 318 ITIPRGQHKNLKANFELDNTLEAPLAKGTKVGTL 351


>gi|258511715|ref|YP_003185149.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478441|gb|ACV58760.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 414

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 75/328 (22%), Positives = 141/328 (42%), Gaps = 6/328 (1%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P  S+    +     L+D  TG V+           AS+TK+MT  ++F  +   K
Sbjct: 47  TQSAPAASVDLAKQARSAVLMDFATGKVLYAKNAHERLPMASITKIMTLLLIFEAIDSGK 106

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
              T  +  S+ A+    S    + G TMT+ + +K + + SAND  VA+AE L  +E+ 
Sbjct: 107 LKWTDRVQASERAASMGGSQIFLEPGETMTVRDLVKGIAIASANDACVAMAEHLDGSEEA 166

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQ 189
           FV  MN  +K LG++ THF N +G+    HY++A D+A++S  +           ++   
Sbjct: 167 FVARMNQRAKELGMTDTHFANCNGLPAPNHYSSAHDIAVMSRALLMHPEITAFTSVYSDY 226

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           ++          NTN  V  + G DG+KTG+T  + + + A+A +    +IAV++G    
Sbjct: 227 LRKDTDHPLWLVNTNKLVRFYDGVDGLKTGYTQEAKYCLSATAKRDGFRVIAVVMGEPKP 286

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             RN   A++L+  F +    +                    +          +   +++
Sbjct: 287 TVRNAEIAAMLNYAFAHYKSVQVYPRGHVVGQVAVKRGTRDRVEAVTAEPVAFVTERSSK 346

Query: 310 MKEAKDKE--SHFIDFEKITLLKNKITK 335
                + +  +      +  ++ + + K
Sbjct: 347 TAYTTEIQWMTLKAPVSRGQVVGHVLVK 374


>gi|153873396|ref|ZP_02001993.1| D-alanyl-D-alanine carboxypeptidase [Beggiatoa sp. PS]
 gi|152070138|gb|EDN68007.1| D-alanyl-D-alanine carboxypeptidase [Beggiatoa sp. PS]
          Length = 393

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 11/333 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+     +          Y L D  +G V+ E   D    PASLTKLMTAY+VF  LK  
Sbjct: 18  LTLASLLVPSPPPIAARAYILQDFYSGKVLMEKKADERLEPASLTKLMTAYLVFQKLKIG 77

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K  LT P+ IS+ A +   S      G+ + +D  LK +I++S ND +VA+AE +  TE+
Sbjct: 78  KIKLTDPVKISQKAWKMGGSRMYLDPGTFVPVDLLLKGMIIQSGNDASVALAELIGGTEQ 137

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   MN  ++ LGL  TH++N+ G+    HY+TARD A ++  +  DFP Y  ++    
Sbjct: 138 AFATLMNEQAQRLGLKNTHYVNSTGLPDEQHYSTARDSATIAQALIYDFPSYYRWYSGSE 197

Query: 193 LEIKGKKYPNTNWAVGTFL-----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                    N N  +           DGMKTG+T A+G+ +VASAI+ +  LI+V+LG  
Sbjct: 198 FTYNNITQTNRNRLLRRKPPLKGMKVDGMKTGYTDAAGYCLVASAIRKNMRLISVVLGTK 257

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQK 301
           +   R +VS  +L  GF           +    I+  +  N +     +S    +   + 
Sbjct: 258 NEKARTEVSERMLDYGFRFFRTYPLYKALQPLDIQRVWYGNTTQLPLGLSRPLYITVPKG 317

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +    N      K   +  +  +    LK ++ 
Sbjct: 318 QYGQLNATAHIDKYIMAPVMAGKSYGSLKIRLG 350


>gi|332286510|ref|YP_004418421.1| putative penicillin-binding protein precursor [Pusillimonas sp.
           T7-7]
 gi|330430463|gb|AEC21797.1| putative penicillin-binding protein precursor [Pusillimonas sp.
           T7-7]
          Length = 418

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 155/327 (47%), Gaps = 6/327 (1%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + A+ +        A       +  LD N+G +IA    D P  PASLTKLM+AYVVF  
Sbjct: 54  STAVTTVGELATVPAPALTARAWMTLDVNSGQIIAAQNLDEPVEPASLTKLMSAYVVFDA 113

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           L+  +  L   + +S+ A +   S    K  S +++D+ L+ +IV+S ND  VA+AE++ 
Sbjct: 114 LENNRLSLEQKVPVSEKAWKTEGSRMFIKVNSQVSVDDLLQGVIVQSGNDATVALAEAVA 173

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +E  FV  MN  +   GL  THF N+ G+    H TTARD+  L+  + TDFPQY+HY+
Sbjct: 174 GSEDAFVTIMNEEAARQGLRDTHFENSTGLPGPTHLTTARDLGTLAKNLVTDFPQYLHYY 233

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             K       K  N N  + +    DG+KTG T ++G+ +V +A++  + +++VI+GA  
Sbjct: 234 SQKEFTYNNIKQNNRNRLLWSDPTVDGLKTGHTQSAGYCLVTTALRDGRRVVSVIVGAAS 293

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE------VCTTQKE 302
              R + S  LL+  F N    K  +        +    EV  +         V   + +
Sbjct: 294 DAARTENSLKLLNWSFQNFDTIKLYDNTKPAVTARVWEGEVETVGLGSTTPTWVTVPRDK 353

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLL 329
                   +  +   +      K+  +
Sbjct: 354 AEQIKPVAQYTQPLIAPLKAGVKVGKV 380


>gi|312144315|ref|YP_003995761.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halanaerobium sp.
           'sapolanicus']
 gi|311904966|gb|ADQ15407.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halanaerobium sp.
           'sapolanicus']
          Length = 375

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 6/341 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +  + I+   M+ ++      A    +    L++  TG V+     D    PAS+TK+M 
Sbjct: 4   KHIVFILIFTMVFSLAGTYVSAFDVDMESAILMEAETGQVLFSKNADRKLPPASMTKIMP 63

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +    L+E    L   +TIS+ A+    S       + + L+  LK + + S ND +V
Sbjct: 64  LLIAMEKLEEGAISLDDKVTISRYAASMGGSQIFLAANTQVELEKLLKAVTIASGNDASV 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AI E +  T   F+  MN  ++ LG+  T+F N+ G+    +Y+TARD+AI+S  +    
Sbjct: 124 AIGEYIAGTYSNFIAMMNRRAEELGMENTNFSNSTGLPDPDNYSTARDIAIMSRELAKYP 183

Query: 182 PQYMHYFQIKGL---EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                            +     NTN  +  +   DG+KTG T  +GF + A+A +GD  
Sbjct: 184 LVLQWGSIWTENIQLPGREAMLVNTNRLINVYPSMDGLKTGHTREAGFCLSATAQKGDTR 243

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEE 295
           LI+V++       R   +  LL  GF   + R+      +       Q+ +       EE
Sbjct: 244 LISVVMQGDTLEQREDTTIRLLDYGFNAFSKREVATEGDQIQNIPVSQSANQVAAGEIEE 303

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 +  +     +E + +E+      K   +   I  +
Sbjct: 304 SFYVMVQKGSERDITQEIEIEENLEAPLLKGDRIGRLIIYR 344


>gi|157370876|ref|YP_001478865.1| D-alanyl-D-alanine carboxypeptidase [Serratia proteamaculans 568]
 gi|157322640|gb|ABV41737.1| Serine-type D-Ala-D-Ala carboxypeptidase [Serratia proteamaculans
           568]
          Length = 389

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 149/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS---------IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ ++ +   +L  +    +                  Y L+D  TG V+A+   D   
Sbjct: 1   MKRSVLAVITGILLPLAVQAADAPLNFPLNTPPAIDAASYVLMDYTTGQVLAQENADQRR 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           NPASLTKLMT  V+   L + K  L   +T+ K+A                K G  +T+ 
Sbjct: 61  NPASLTKLMTGLVIDHALDQHKIGLDDVVTVGKDAWAQGNPVFKGSSLMFLKPGDRVTVR 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           +  + +I+ S ND  VA+A+ +  ++  FV+ MN  S  LGL  THF   HG+   G +T
Sbjct: 121 DLSRGIIIDSGNDACVAMADYVAGSQAAFVKLMNEKSAQLGLQNTHFETVHGLDAPGQFT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           TA D+A++S  I    P   H +  K L   G    N N       L  DG+KTG T ++
Sbjct: 181 TAGDLAVISRAIIMSEPAEYHMYSEKSLTWNGITQQNRNGLLWDKNLRVDGLKTGHTESA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDF 280
           GFNI+ASA +GD+ LIAV++G      R + +  LL+ G  +       +       +  
Sbjct: 241 GFNIIASATEGDRRLIAVVMGGKSPKGREEQARKLLTWGLRDFVTLHLFSAGQSLGQEKV 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +         ++   +  +      + +   +         +   +   
Sbjct: 301 WYGDRHEVAVGSQQDQYLSLPKSEADKLKAQYVINTPRLDAPLTQGQSVGEI 352


>gi|119384875|ref|YP_915931.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paracoccus denitrificans
           PD1222]
 gi|119374642|gb|ABL70235.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paracoccus denitrificans
           PD1222]
          Length = 385

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 148/343 (43%), Gaps = 11/343 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR     I   ++    P  + A         + D  TG V+ E   D P  PAS++KLM
Sbjct: 1   MRALTFRIFALLMVLALP--ARAFDTNARAAWVYDVATGTVLMEKNADEPLPPASMSKLM 58

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  ++F  L + +  + T   +S  A +   S    +     T+++ +  +I+ S ND  
Sbjct: 59  TLNMLFEALHDGRVAMDTTFPVSTKAWQMGGSKMFVEPADRPTVEDLIHGIIINSGNDAC 118

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           V +AE L  TE+ F + MN  ++ LG++ +HF+N+ G     H  +  D+ +L+ R+ T+
Sbjct: 119 VVVAEGLAGTEEAFARLMNERARQLGMANSHFVNSSGWPDPQHRMSMHDLGLLATRLITE 178

Query: 181 FPQYMHYFQIKGLEIKGKKYP---NTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQ 234
           FP+    F +     KG+      N N  +    G   ADG+KTG T  +G+ +V SA+Q
Sbjct: 179 FPELYKNFALTEYNYKGRVPSNAGNRNPLLRLGTGDWKADGLKTGHTQEAGYGLVGSAVQ 238

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPN 291
           GD+ ++ VI G      R + +  +++  +   T R  I     +I+          V  
Sbjct: 239 GDRRIVFVITGLSSEKARAEEAEQIVNWAYRQFTMRTIIPKDEIVIQAPVWLGDKGRVGL 298

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            + +         + +    EA  K        K   L   I 
Sbjct: 299 TTRDGVRVLIPAGSQSGVKAEAVFKGPIEAPITKGDQLGELIV 341


>gi|52786237|ref|YP_092066.1| DacF [Bacillus licheniformis ATCC 14580]
 gi|163119526|ref|YP_079656.2| penicilin binding protein [Bacillus licheniformis ATCC 14580]
 gi|52348739|gb|AAU41373.1| DacF [Bacillus licheniformis ATCC 14580]
 gi|145903033|gb|AAU24018.2| penicilin binding protein (putative D-alanyl-D-alanine
           carboxypeptidase) [Bacillus licheniformis ATCC 14580]
          Length = 390

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK---------LPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + +  +  +    ++A+ +               L++ +TG V+ +       
Sbjct: 1   MKRHLSKLLIFTIILMTAPSALAKESAKKPSELADDAKSAVLIERDTGKVMYDKNSREKL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L E K  +   +  S+ A+    S    + G  MT+++ LK +
Sbjct: 61  PPASMTKVMTMLLIMEALDEGKIKMKDKVRTSEYAASMGGSQIFLEPGEEMTVEDMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FV+ MN  +  LGL  T F N  G+ + GHY+TA DMA
Sbjct: 121 AIGSGNDASVAMAEHIAGSEEEFVKRMNEKAAELGLKDTSFQNTTGLPEEGHYSTAYDMA 180

Query: 172 ILSWRIKTDFPQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +++  +            +   ++    K     NTN  +  + G DG+KTGFT  + + 
Sbjct: 181 LMAKELLKYENITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGFTNEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNL 285
           + ASA +G+  +IAV+ GA     RN     +L   F           N II D      
Sbjct: 241 LTASAKKGNMRVIAVVFGASTPKERNAQITKMLDFAFSQYETHPMYKRNEIISDLKVNKG 300

Query: 286 SNEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +  N+  SE +    K+  N  +  KE K KE      +K T L   + KK
Sbjct: 301 REQKINLVTSEPISLLTKKGENIESVKKEIKQKEDIQAPVKKGTELGTLVLKK 353


>gi|295695956|ref|YP_003589194.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus tusciae DSM
           2912]
 gi|295411558|gb|ADG06050.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus tusciae DSM
           2912]
          Length = 425

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 9/327 (2%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              S           L+D  TG V+ E        PAS+TK+MT  +    L+  +  L+
Sbjct: 62  AETSPKLAEHAVSAVLMDAATGTVLMEKNSHEKLPPASITKIMTMLLTVEALERGQVQLS 121

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +  S+ A+    S    + G  MTLD+ +K + V SAND +VA+AE L  +E +FV  
Sbjct: 122 DRVRTSERAASMGGSQIFLEPGEEMTLDDMMKGIAVASANDASVAVAEYLAGSEAEFVSL 181

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGL 193
           MN  ++ LG+  THF+N +G+   GHYT+A D+AI+S  +           ++   ++  
Sbjct: 182 MNRRAEELGMRDTHFVNCNGLPAEGHYTSAYDIAIMSRELLKHPQVLRWTSLYEDYLRKN 241

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
             +     NTN  V  + G DG+KTGFT ++ + + A+A +GD  +IAV++G      RN
Sbjct: 242 TDRPFWLVNTNKLVRFYPGVDGLKTGFTESARYCLSATAKKGDFRVIAVVMGEPTSKQRN 301

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
                +L   F      K              + +       + + V    +   +    
Sbjct: 302 AEVTQMLDWAFGQYQFVKLYGPGDPVGQVRLDKGDPEKAPVTVRQSVGVLLRRGESKEGI 361

Query: 310 MKEAKDKESHFIDFEKITLLKNKITKK 336
              A+         +K  L+   +  +
Sbjct: 362 RARAEVSPG-TAPKKKGALVGKVVVYR 387


>gi|229525558|ref|ZP_04414963.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae bv. albensis
           VL426]
 gi|229339139|gb|EEO04156.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae bv. albensis
           VL426]
          Length = 391

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDVVGTLYYQ 353


>gi|325844944|ref|ZP_08168309.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
 gi|325488994|gb|EGC91383.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
          Length = 389

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/349 (22%), Positives = 142/349 (40%), Gaps = 15/349 (4%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M+        L   + + L +     +           L++  TG ++ E  P     PA
Sbjct: 1   MKIRKVLISLLTCFSFSCLVHSKIVSADELVTDGKAAILIEAETGEILYEKNPHEQLAPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+M+ Y++   +          I +S+NA+ Y  S    K G  M + +  K + + 
Sbjct: 61  SMTKMMSMYLILESIHNGALQWDEVIRVSENAASYGGSQIYLKPGEKMIVRDLFKSIAIA 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND   A+AE +  +E+ FV+ MN  +K LG++ T F N  G+   GH TT  DM+I++
Sbjct: 121 SANDSVTALAERVAGSEEAFVELMNQKAKELGMNNTVFKNPTGLTAAGHVTTPYDMSIIA 180

Query: 175 WRIKTDFPQYMHY-----FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
             +  D+P+   +       I+          NTN  +    G DG+KTGFT  +G+ + 
Sbjct: 181 RHLLQDYPEITEFSGLYEDYIRQDTESPFWLVNTNRLIKYVDGVDGLKTGFTQEAGYCLT 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNL 285
           A+A +    +IAV++GA     RN+    L+   +       K+   +            
Sbjct: 241 ATAQRNGMRVIAVVMGASKSEIRNQEVTRLIEYAYEQYELVPKLESGLVVSSGHHLLAKT 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +      +++   +K+              E   +  +    +     
Sbjct: 301 RDFDIVTGDQITILKKKTDGEGETNYTVTLNEEIILPIQPGDEVGTLTY 349


>gi|121728034|ref|ZP_01681072.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V52]
 gi|147675663|ref|YP_001216421.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O395]
 gi|229512959|ref|ZP_04402425.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TMA 21]
 gi|229523260|ref|ZP_04412667.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TM 11079-80]
 gi|229529956|ref|ZP_04419346.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 12129(1)]
 gi|254225715|ref|ZP_04919321.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V51]
 gi|254285618|ref|ZP_04960582.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae AM-19226]
 gi|121629663|gb|EAX62083.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V52]
 gi|125621723|gb|EAZ50051.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V51]
 gi|146317546|gb|ABQ22085.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O395]
 gi|150424480|gb|EDN16417.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae AM-19226]
 gi|227012764|gb|ACP08974.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O395]
 gi|229333730|gb|EEN99216.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 12129(1)]
 gi|229339623|gb|EEO04638.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TM 11079-80]
 gi|229349852|gb|EEO14806.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TMA 21]
 gi|327483673|gb|AEA78080.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae LMA3894-4]
          Length = 391

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDVVGTLYYQ 353


>gi|28901151|ref|NP_800806.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260362712|ref|ZP_05775581.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus K5030]
 gi|260879998|ref|ZP_05892353.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AN-5034]
 gi|260894673|ref|ZP_05903169.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus Peru-466]
 gi|28809664|dbj|BAC62639.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086579|gb|EFO36274.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus Peru-466]
 gi|308091747|gb|EFO41442.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AN-5034]
 gi|308112412|gb|EFO49952.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus K5030]
          Length = 389

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/355 (27%), Positives = 147/355 (41%), Gaps = 19/355 (5%)

Query: 1   MRQFLVIIAMAM---------LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           MR+  +     +                +  A       Y L+D +TG V+ E   D   
Sbjct: 1   MRKITLFNTTFLTGLVTFSHFAFAAPTVVPNAPELSSRGYVLMDYHTGKVLVERDADKRL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNAL 108
           NPASLTKLMTAYV    +      L   + IS+NA        S    +  +++ L +  
Sbjct: 61  NPASLTKLMTAYVAGQEVNAGNISLDDQVVISRNAWAKNFPDSSKMFIEVNTSVPLSDLY 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + L+V+S ND +VAIAE +  +E  FV  MN+ +  LGL+ + F N HG+   G Y+T  
Sbjct: 121 RGLVVQSGNDASVAIAEHVAGSEAGFVSLMNSWASQLGLTNSSFTNPHGLDSDGLYSTPH 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A L   I  D P     +        G    N N       +  DGMKTG+T  +G++
Sbjct: 181 DIAKLGQAIIRDLPDIYPMYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYS 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           +  SA  GD  LIAV++GA  ++ R   S  LLS GF                    +  
Sbjct: 241 LATSATNGDMRLIAVVMGAKSQSVRESESKQLLSYGFRFYDTLMPTAAGTDIANARVWMG 300

Query: 284 NLSNEVPNISEEVCTTQKEII--NYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   ++ +V  T  +        +++   D  +     + +  L  K+  K
Sbjct: 301 QKDELKVGVNRDVYLTLPKGDVNKLKAEVEYNGDLLAPIAQDQVVGTLLYKVDGK 355


>gi|227112044|ref|ZP_03825700.1| penicillin-binding protein 6 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 401

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   +       L          Y L+D ++G V+AE+  D   +PASLTK+M +YV+
Sbjct: 18  VLLVGLVPFTYAEQLPAVPQIDAKAYILIDHHSGKVLAESNADERLDPASLTKIMASYVI 77

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K   T  +T+ K+A                K G  + +    K ++++S ND 
Sbjct: 78  GQAIKSGKIRPTDEVTVGKDAWATGNPALRGSSLMFLKPGDRIPVSELNKGIVIQSGNDA 137

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++A+A+ +  ++  FV  MNN +K L L+ T+F   HG+   G Y+TARDMA+L   +  
Sbjct: 138 SIALADYVAGSQDAFVSLMNNYAKALNLTNTNFRTVHGLDAPGQYSTARDMALLGQALIR 197

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L  DG+KTG T  +G N+VASA +G+  
Sbjct: 198 DVPEEYALHKEKEFTFNNIRQPNRNRLLWSTNLNVDGVKTGHTSGAGHNLVASATEGNMR 257

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R + S  LL+ GF        I        +  +          +++
Sbjct: 258 LISVVLGAQTDAIRFRESEKLLTWGFRFFETVTPIKTDAPFTTQRVWFGTEKEARLGVAQ 317

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +   T  +    N +     ++        K  ++   
Sbjct: 318 DAALTIPKGQMKNLKASFTLNQPQLSAPLTKNQVVGTI 355


>gi|93005488|ref|YP_579925.1| Serine-type D-Ala-D-Ala carboxypeptidase [Psychrobacter
           cryohalolentis K5]
 gi|92393166|gb|ABE74441.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Psychrobacter cryohalolentis K5]
          Length = 388

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 156/343 (45%), Gaps = 9/343 (2%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           Q +V ++++M + +              Y L+D NTG ++A+   +    PASLTK+MT+
Sbjct: 12  QLVVGVSISMGAVMASAAIQPPEMANTAYVLMDYNTGEILAQKNANQALPPASLTKMMTS 71

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDI 119
           Y++   L       T  + +S +A     S           + ++ + L+ +I++S ND 
Sbjct: 72  YIIEQRLASGDLKETDQVLMSPSAWCRGSSSQSCMYVPVNKSASVIDMLRGIIIQSGNDA 131

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           + A+AE +  +E  F   MN  ++ +G+  THF+N+ G+   GH  +A D+A LS  I  
Sbjct: 132 SKAMAEHIAGSEASFAILMNEQAQKIGMKNTHFVNSTGMPDEGHQASALDLAKLSRAIIK 191

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +   Y   +  K     G    N N  + T    DG+KTG T A+G+ + AS+ +    L
Sbjct: 192 NSGDYYSIYSEKEFTYNGITQGNRNALLATDPTVDGLKTGHTDAAGYCLAASSNREGMRL 251

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNIS 293
           I+VI+G   +  R   S  LL+ GF + T        + ++ +   F +          +
Sbjct: 252 ISVIMGTESQQARADQSRELLNWGFGHFTTVTQAPAGQFVSKVPVWFGEAKEIEVATGDN 311

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            ++ TT+ +     T +   +  E+     ++I  +   I  K
Sbjct: 312 LQILTTKTQKNKITTVVDIPESLEAPIKKGQEIGKMMAVIDGK 354


>gi|116748745|ref|YP_845432.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697809|gb|ABK16997.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Syntrophobacter fumaroxidans MPOB]
          Length = 422

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/314 (25%), Positives = 140/314 (44%), Gaps = 6/314 (1%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      L++ +TG ++ E   D    PAS TK+ + Y+VF  L++ +  L   I 
Sbjct: 31  SPGQVNAKSAILMEVSTGAILFEQNADEVIEPASFTKIASLYLVFEALRQGRIHLNDEIW 90

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           IS+ A     S      G+ + L+  LK + V S ND  VA AE +  + + FV+ MN  
Sbjct: 91  ISEAAWRTGGSKMFVGVGTKVPLEELLKGIAVVSGNDACVAAAEHVSGSAETFVEAMNRK 150

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LG++ + F+N HG+   G  TTARDMAIL       FP+ + Y  ++          
Sbjct: 151 TRELGMTHSRFLNPHGLPVEGQTTTARDMAILDSAYLRQFPESLQYHSMREYTYNNIVQY 210

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           N N  +      DG+KTG+  A+G+++ A+A +    L+AV++GA     R + +  LL+
Sbjct: 211 NRNHLLLKDPSVDGLKTGYVAAAGYHLAATAKRDGMRLLAVVMGAGTPAVREREALKLLN 270

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNE------VPNISEEVCTTQKEIINYNTQMKEAKD 315
            GF   T  +           +    +       P  +     +Q +      +++   +
Sbjct: 271 YGFRYYTLVQPFPQGQPVTTVKVWKGQRDQLGLYPQEAAGFLVSQAQKAQLRWEIQAPAE 330

Query: 316 KESHFIDFEKITLL 329
             +     +K+  +
Sbjct: 331 ITAPVQAGQKVGEV 344


>gi|212712937|ref|ZP_03321065.1| hypothetical protein PROVALCAL_04035 [Providencia alcalifaciens DSM
           30120]
 gi|212684415|gb|EEB43943.1| hypothetical protein PROVALCAL_04035 [Providencia alcalifaciens DSM
           30120]
          Length = 409

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 86/330 (26%), Positives = 142/330 (43%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +     +          Y L+D N+G V+AE+  D   +PASLTK+MT+YV+   +K  K
Sbjct: 38  AFPNTSIPAVPDIDAAAYILIDYNSGKVLAESNADQRRDPASLTKMMTSYVIGQAIKSGK 97

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+  +A                K G  +++    + + ++S ND  VA+A+ +
Sbjct: 98  IGANDMVTVGDDAWATGNPIFKGSSLMFLKPGDRVSVSQLTRGINLQSGNDACVAMADYV 157

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
              +  FV  MN     LGL  THF   HG+   G Y++ARDMA++   +  D P+    
Sbjct: 158 AGDQANFVNLMNTYVTKLGLQNTHFQTVHGLDAAGQYSSARDMALIGQALIRDVPEEYEI 217

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N       L  DG+KTG T A+G+N+VASA  GD  LI+V++G 
Sbjct: 218 YKEKEFTFNNIRQTNRNGLLWDKSLAVDGIKTGHTDAAGYNLVASAKDGDMRLISVVMGG 277

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKE 302
                R+  S  LL+ GF      K +   ++      +  + S     + E++  T   
Sbjct: 278 KSSKGRDAESKKLLTYGFRFYETVKPLQADVEFATAPVWFGDDSEVKLGVVEDLYLTIPR 337

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +              +K   +   
Sbjct: 338 GRLKDLKASYELTTTEIEAPLKKGQQVGTI 367


>gi|315127074|ref|YP_004069077.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Pseudoalteromonas sp. SM9913]
 gi|315015588|gb|ADT68926.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Pseudoalteromonas sp. SM9913]
          Length = 386

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/334 (28%), Positives = 149/334 (44%), Gaps = 10/334 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++ + A+ S     +          Y L+D  TG VIAE   D    PASLTK+MT+YV+
Sbjct: 15  LVCSAAVFSATAQIIPAPPQVNAKGYFLVDFTTGKVIAEGEADTKLAPASLTKMMTSYVI 74

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            + +       T  +T+S+ A        S    + G  +++D+    +I++S ND  VA
Sbjct: 75  GTEINAGNIAPTDMVTVSEKAWAKNFPESSKMFIEVGKQVSVDDLNHGIIIQSGNDACVA 134

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  F   MN  ++ +G++ THF+N+HG+    HYTT RDMA L   +  D P
Sbjct: 135 MAEHIAGSESAFADLMNAHAEKIGMTNTHFVNSHGLDTDAHYTTPRDMATLGAALIRDVP 194

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                ++ K     G K  N N       L  DG+KTG T  +G+++V SA + D  LIA
Sbjct: 195 DEYALYKQKSFTFNGIKQYNRNSLLWDESLDVDGIKTGHTSEAGYSLVTSATKNDMRLIA 254

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE-- 295
           V++G      R   S  LL+ GF                 +  +  N  N    I E+  
Sbjct: 255 VVMGTSSERARKVESKKLLNYGFRFFETITPYKAGDSFAEQRVWMGNKENVSLGILEDTP 314

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +   + +  N     +     E+      K+  L
Sbjct: 315 ITIPRGQHKNLKANFELDDTLEAPLAKGTKVGTL 348


>gi|332654526|ref|ZP_08420269.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcaceae bacterium
           D16]
 gi|332516490|gb|EGJ46096.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcaceae bacterium
           D16]
          Length = 383

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSN-----IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++   ++   +L                    P   L++  TG ++ E        PAS
Sbjct: 1   MKRIGSLVLAVLLLTGTASAQEAAAQSPLELSAPSAVLVEKETGTILYEKEAKRQMEPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  ++   L   +      +T+S  A+    S    K+G  MT+   +K + V S
Sbjct: 61  VTKVMTLLLIMEALDSGRISREDVVTVSARAAGMGGSQVYLKEGEQMTVGELIKCITVVS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE L  +E  FVQ MN  ++ LG+  T+F+N  G+   GH TTA D+A++S 
Sbjct: 121 GNDATVAMAEYLAGSESAFVQQMNQRAQKLGMEDTNFVNCTGLPASGHVTTAYDIALMSR 180

Query: 176 RIKTDFP--QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            +  + P  +      +  +        NTN  V  + GA G+KTG T ++ + + A+A 
Sbjct: 181 ELILNHPGIREYTTIWMDSIRDGAFGLTNTNRLVRFYEGATGLKTGSTDSALYCMSATAE 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVP 290
           +    LIAV++ A     R + + ++L  GF   T  +                +    P
Sbjct: 241 RDGMELIAVVMAAPTAADRFEDAKAMLDYGFGAYTLMQVYPESPLAPIPVLLGTVGQIQP 300

Query: 291 NISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +  E  V   + E  +  T++  A+D E+     +K+  L+  +  +
Sbjct: 301 ELERECRVLVRKGEEGSVTTKLTLAQDLEAPVEAGQKVGELEILVNGE 348


>gi|288962599|ref|YP_003452893.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
 gi|288914865|dbj|BAI76349.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
          Length = 451

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 7/338 (2%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +R+   ++ +  A+LS                  L+D ++G V+ +        P+S+TK
Sbjct: 77  IRRLAGILSLVAAVLSATPAMALSQPDTAARQAYLVDLSSGAVLLDKNGAERMAPSSMTK 136

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MTAY+ +  L   +  L T   IS+ A +   S    K GST+ +++ L+ L++ S ND
Sbjct: 137 MMTAYLTYDALVHGRTTLDTSFPISQTAWKMGGSRMFLKLGSTVRVEDLLRGLLIDSGND 196

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            AVA+AE L  +E  F   MN  ++ LG++ +HFMNA G    GHYTTARD+AIL+ R+ 
Sbjct: 197 AAVALAEGLAGSESAFAGLMNAKARELGMADSHFMNASGWPDPGHYTTARDLAILATRLI 256

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFPQ+ HY   +     G +  N N  +   +  DG+KTG T   G+ + AS  +  + 
Sbjct: 257 RDFPQFYHYESERNFTWNGIRQGNRNPLLYHPVSVDGIKTGHTEVGGYGLTASGERNGRR 316

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISE 294
           L+ V+ G     +RN     LL   + +      +           +     +    +++
Sbjct: 317 LVLVVNGLPSPQSRNDEPTRLLDWAWNSFKLYPLLRKGELVEQAPVWMGAEDSVPVTVAD 376

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +V  T       +  +      E       +  ++   
Sbjct: 377 DVTVTMAPADRNSLHVVAT-LAEPLPSPVRRGDVVGRL 413


>gi|143439|gb|AAA22704.1| DD-carboxypeptidase [Bacillus subtilis]
          Length = 389

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + + ++   F   + A+          ++     L++ +TG V+     +   
Sbjct: 1   MKRLLSTLLIGIMLLTFAPSAFAKQDGKRTSELAHEAKSAVLIERDTGKVLYNKNSNERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L + K  ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDKGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FV+ MN  +K LGL  T F N  G+ + GHY++A DMA
Sbjct: 121 AIASGNDASVAMAEFISGSEEEFVKKMNKKAKELGLKNTSFKNPTGLTEEGHYSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           I++  +            +   ++    K     NTN  +  + G DG+KTG+T  + + 
Sbjct: 181 IMAKELLKYESITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGYTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           + ASA +G+   IAV+ GA     RN     +L   F                  +    
Sbjct: 241 LTASAKKGNMRAIAVVFGASTPKERNAQVTKMLDFAFSQYETHPLYKRNQTVAKVKVKKG 300

Query: 288 EVP----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +        SE +    K+  + N   KE K K++     +K   L   + KK
Sbjct: 301 KQKFIELTTSEPISILTKKGEDMNDVKKEIKMKDNISAPIQKGQELGTLVLKK 353


>gi|296103221|ref|YP_003613367.1| D-alanyl-D-alanine carboxypeptidase fraction C [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057680|gb|ADF62418.1| D-alanyl-D-alanine carboxypeptidase fraction C [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 404

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 96/339 (28%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+ + +  L         A       + L+D ++G V+AE   D   +PASLTK+MT+YV
Sbjct: 20  LLFLFVPTLYAAEQAAPEAPPVDARAWILMDYSSGKVLAEGNADEKLDPASLTKIMTSYV 79

Query: 65  VFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  L   +TI K+A           S    K G  +++ +  K +I++S ND
Sbjct: 80  VGQALKAGKIKLDDMVTIGKDAWATGNPALRGSSVMFLKPGDQVSVSDLNKGVIIQSGND 139

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  ++  F+  MN  ++ LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 140 ACIALADYVAGSQDSFIGLMNGYAQKLGLTNTTFKTVHGLDAPGQFSTARDMALLGKALI 199

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P      + K       + PN N     + +  DGMKTG T  +G+N+VASA QGD 
Sbjct: 200 HDVPDEYAIHKEKEFTFNKIRQPNRNRLLWSSNVNVDGMKTGTTAGAGYNLVASATQGDM 259

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI+V+LG      R   S  LL+ GF        I      + +  +  + S       
Sbjct: 260 RLISVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVSQRVWFGDKSEVNLGAG 319

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E    T       N +              +K  ++   
Sbjct: 320 EAGSVTIPRGQLKNLKASYTLTDPQLTAPLKKGQVVGTI 358


>gi|45644640|gb|AAS73028.1| D-alanyl-D-alanine carboxypeptidase [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 382

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/339 (27%), Positives = 155/339 (45%), Gaps = 8/339 (2%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+  L+  + ++ +     F+  A    L  Y L+D  T  VIA++  D    PAS+TK+
Sbjct: 1   MKNLLLFTLLVSNIILGQSFVPNAPELNLKGYILIDPTTNTVIAQSNSDGLIEPASMTKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAYVV   ++     +   + IS+ A +   S    + G  +++ + LK +I++S ND 
Sbjct: 61  MTAYVVADQIQNDLISIDDEVLISEKAWKMGGSKMFIEVGKRVSILDLLKGIIIQSGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVAIAE +  TE  FV  MN  + +LG++ T F+N+ G+    H TTA D+AIL+    T
Sbjct: 121 AVAIAEYVGGTEDGFVDLMNAYAASLGMNNTSFINSTGLPDVNHLTTAEDLAILTSNFIT 180

Query: 180 DFPQYMHYFQIKGLEIKGK--KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            FP+    F+ K  E  G      N N  +     +DG+KTG T ++G+ ++ SA +G+ 
Sbjct: 181 KFPEIYALFKEKEFEYGGISGNKYNRNKLLWRDETSDGVKTGHTSSAGYCLIGSAKRGNM 240

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNIS 293
            LI V+ G+   N     +  LL  GF      K  +   +      +          + 
Sbjct: 241 RLITVVAGSDSANNSFSDTQRLLEYGFRFYATEKYFDVGTEYASAKVWGGKNDTISLGVK 300

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            ++  T       + ++     K +      K   +   
Sbjct: 301 NDISITLPRTKFKDVKVNYV-VKNNVQAPINKGDKIGTL 338


>gi|258625415|ref|ZP_05720309.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM603]
 gi|258582326|gb|EEW07181.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM603]
          Length = 391

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFLV--------IIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ ++         +++ + S  F     +  A       Y L+D ++G V+AE   + 
Sbjct: 1   MKKSILKSVLASSVTLSITLSSTTFASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFIEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  +E  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGSEDAFVDLMNAWASSLGMKDSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +KE      +K  ++     +
Sbjct: 301 MGDKDTVALGVDKDTYVTLPRGQAKDLTASFVLEKE-LKAPLKKGDVVGTLYYQ 353


>gi|206579571|ref|YP_002237570.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           342]
 gi|206568629|gb|ACI10405.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           342]
          Length = 389

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/346 (26%), Positives = 145/346 (41%), Gaps = 19/346 (5%)

Query: 6   VIIAMAMLSNI--------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           + IA+++L++         FP        +   + L+D  TG V+         NPASLT
Sbjct: 7   LFIAVSLLASSVSCAFAVDFPATVAPPAIQAGSWVLMDYTTGQVLTAGNEHQQRNPASLT 66

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   +   +      +T+ K+A                K G  +++ +  + L
Sbjct: 67  KLMTGYVVDRAIDSHRITFDDIVTVGKDAWAKGNPVFDGSSLMFLKPGDRVSVRDLSRGL 126

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV S ND  VA+A+ +   + +FV  MN   + L L  THF   HG+   G +++A D+A
Sbjct: 127 IVDSGNDACVALADYVAGGQPQFVALMNQYVEKLHLRDTHFETVHGLDAPGQHSSAYDLA 186

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  I    P   H +  K L   G    N N       +  DG+KTG T  +GFN++A
Sbjct: 187 VLSRAIIHGEPDVYHMYSQKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIA 246

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLS 286
           SA+ G + LIAV++GA     R + +A LL  G  N    + +    K      +  +  
Sbjct: 247 SAVDGQRRLIAVVMGADSPKGREQQAAKLLHWGQQNFDTVQVLQKGQKVGTERIWYGDKE 306

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                  ++      +      + K   DK+           +   
Sbjct: 307 QIKLGTDQDFWLALPKAEVSRIKAKYVLDKKDLEAPIAANQRVGEI 352


>gi|167625150|ref|YP_001675444.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355172|gb|ABZ77785.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella halifaxensis
           HAW-EB4]
          Length = 390

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 155/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L   ++A LS          A T     Y L+D NTG +IAE       NPASLTK
Sbjct: 8   LKTLLFATSVAALSVQAAPVVTPNAPTVAAKAYVLMDYNTGQIIAEENAYESLNPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K      T  +TISK A        S    + G  +T++   K +I++S
Sbjct: 68  MMTSYVIGHEIKVGNVSPTDEVTISKKAWSKNFPDSSKMFIEVGKKVTVEELNKGIIIQS 127

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H +TA DMAIL  
Sbjct: 128 GNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMQDSYFENSHGLDSDNHKSTAYDMAILGA 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            I  D P     ++ K     G K  N N       L  DG+KTG T  +G+N+V SA +
Sbjct: 188 AIIRDVPDEYAVYKEKSFTYNGIKQYNRNGLLWDKSLSVDGIKTGHTSGAGYNLVTSATK 247

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G      R   S  LL+ GF                 Q+    +   I  
Sbjct: 248 DGMRLISVVMGTKSEAARKAESKKLLNYGFRFFETVTPYKAGDTFVTQKIWYGDRETIDL 307

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++ +  N     +  K+ ++     E +  +  ++  K
Sbjct: 308 GVVTDTPITISRGQAKNLQANFELTKELKAPIAKGETVGRVYFQLNGK 355


>gi|300722312|ref|YP_003711597.1| D-alanyl-D-alanine carboxypeptidase [Xenorhabdus nematophila ATCC
           19061]
 gi|297628814|emb|CBJ89392.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Xenorhabdus nematophila ATCC 19061]
          Length = 402

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF--------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++   + IA+A   + F          +          Y L+D N+G ++AE   D   +
Sbjct: 10  IKSVTLGIALAASVSAFANTDDNFKTMIPGVPELDSEAYILIDYNSGKILAEKNADVRRD 69

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTK+MT+YV+   +K  K      +T+ K+A                K G  +++  
Sbjct: 70  PASLTKMMTSYVIGQAIKSGKIGPNDIVTVGKDAWATGNPIFKGSSLMFLKPGDQVSVAM 129

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + + ++S ND  VA+A+ +  ++  FV  MN   ++LGL  THF   HG+  +G Y++
Sbjct: 130 LSRGINLQSGNDACVAMADYVAGSQDAFVSLMNKYVQSLGLQNTHFQTVHGLDANGQYSS 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           ARDMA++   +  D P     ++ K       + PN N       L  DG+KTG T  +G
Sbjct: 190 ARDMALIGQALIRDVPDEYAIYKEKEFTYNNIRQPNRNGLLWDKSLNVDGIKTGHTSGAG 249

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  LI+ ++G+     R   S  LL+ GF        +        +  +
Sbjct: 250 YNLVSSATEGNMRLISAVMGSPTFKGREGDSKKLLTWGFRFFETVSPLQVGKEFASEPIW 309

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +       + ++V  T       + +     +         K  ++   
Sbjct: 310 FGDTDKVQLGVDKDVYLTIPRGRLKDLKASYVLNNTELHAPLVKNQVVGTI 360


>gi|262173532|ref|ZP_06041209.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus MB-451]
 gi|261890890|gb|EEY36877.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus MB-451]
          Length = 378

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/336 (26%), Positives = 138/336 (41%), Gaps = 7/336 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +     +  +               Y L+D +TG ++ E       NPASLTKLMTAYV 
Sbjct: 4   MAFVPTLGFSALTITPEPPQLAANGYVLIDYHTGKILVERNAHQKLNPASLTKLMTAYVA 63

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K         + IS NA        S    + GS + L +  + LIV+S ND +VA
Sbjct: 64  GQEMKRGNIHAEDQVRISNNAWAKKFPDSSKMFIEVGSYVNLMDLYRGLIVQSGNDASVA 123

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           IAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+L   I  D P
Sbjct: 124 IAEHVAGSESAFVSLMNSWAQQLGMNNSSFANPHGLDNSNLYSTPYDIALLGQAIIRDLP 183

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +    +        G    N N       +  DGMKTG+T  +G+++ +SA  G+  LI+
Sbjct: 184 EIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLIS 243

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCT 298
           V++G+     R   S  LLS GF              I          NEV   S +   
Sbjct: 244 VVMGSKSVKIREAESKQLLSYGFRFFETVSPHQKETVIQSQRIWYGDKNEVALGSADTVY 303

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                 +        +  ++      K  ++   + 
Sbjct: 304 LTLPRNDVKKLNAVIQLDKTLEAPVAKGDVVGAILY 339


>gi|321311824|ref|YP_004204111.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis BSn5]
 gi|320018098|gb|ADV93084.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis BSn5]
          Length = 389

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + + ++   F   + A+          ++     L++ +TG V+     +   
Sbjct: 1   MKRLLSTLLIGIMLLTFAPSAFAKQDGKRTSELAHEAKSAVLIERDTGKVLYNKNSNERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L + K  ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDKGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FVQ MN  +K LGL  T F N  G+ + GHY++A DMA
Sbjct: 121 AIASGNDASVAMAEFISGSEEEFVQKMNKKAKELGLKNTSFKNPTGLTEEGHYSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           I++  +            +   ++    K     NTN  +  + G DG+KTG+T  + + 
Sbjct: 181 IMAKELLKYESITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGYTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           + ASA +G+   IAV+ GA     RN     +L   F                  +    
Sbjct: 241 LTASAKKGNMRAIAVVFGASTPKERNAQVTKMLDFAFSQYETHPLYKRNQTVAKVKVKKG 300

Query: 288 EVP----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +        SE +    K+  + N   KE K K++     +K   L   + KK
Sbjct: 301 KQKFIELTTSEPISILTKKGEDMNDVKKEIKMKDNISAPIQKGQELGTLVLKK 353


>gi|16079405|ref|NP_390229.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310266|ref|ZP_03592113.1| penicilin binding protein (putative D-alanyl-D-alanine
           carboxypeptidase) [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221314589|ref|ZP_03596394.1| penicilin binding protein (putative D-alanyl-D-alanine
           carboxypeptidase) [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221319512|ref|ZP_03600806.1| penicilin binding protein (putative D-alanyl-D-alanine
           carboxypeptidase) [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221323788|ref|ZP_03605082.1| penicilin binding protein (putative D-alanyl-D-alanine
           carboxypeptidase) [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|34395963|sp|P38422|DACF_BACSU RecName: Full=D-alanyl-D-alanine carboxypeptidase dacF;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein dacF; Short=PBP; Flags:
           Precursor
 gi|1303997|dbj|BAA12652.1| DacF [Bacillus subtilis]
 gi|2634783|emb|CAB14280.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 389

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + + ++   F   + A+          ++     L++ +TG V+     +   
Sbjct: 1   MKRLLSTLLIGIMLLTFAPSAFAKQDGKRTSELAHEAKSAVLIERDTGKVLYNKNSNERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L + K  ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDKGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FV+ MN  +K LGL  T F N  G+ + GHY++A DMA
Sbjct: 121 AIASGNDASVAMAEFISGSEEEFVKKMNKKAKELGLKNTSFKNPTGLTEEGHYSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           I++  +            +   ++    K     NTN  +  + G DG+KTG+T  + + 
Sbjct: 181 IMAKELLKYESITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGYTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           + ASA +G+   IAV+ GA     RN     +L   F                  +    
Sbjct: 241 LTASAKKGNMRAIAVVFGASTPKERNAQVTKMLDFAFSQYETHPLYKRNQTVAKVKVKKG 300

Query: 288 EVP----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +        SE +    K+  + N   KE K K++     +K   L   + KK
Sbjct: 301 KQKFIELTTSEPISILTKKGEDMNDVKKEIKMKDNISAPIQKGQELGTLVLKK 353


>gi|315646365|ref|ZP_07899483.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus vortex
           V453]
 gi|315278008|gb|EFU41328.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus vortex
           V453]
          Length = 396

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 24/358 (6%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAE------------TNKLPYYTLLDTNTGHVIAE 44
           M++ L+    ++ + + S   P  +                       LLD +TG +I E
Sbjct: 1   MKKALIAGFLVLFVGLSSTAVPSYAEENSKTGEGSSQEELAPSARSAILLDADTGTIIYE 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                   PAS+TK+MT  +    +   +   T  +  S+ A+    S    + G  MT+
Sbjct: 61  KNSHDKLPPASITKIMTMLLTMEAIDAGRLQWTDKVRTSEYAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           D  LK + + S ND +VA+AE L  +E+ FV+ MN+ +  LG+  THF+N +G+    HY
Sbjct: 121 DEMLKGIAMASGNDASVAMAEKLAGSEQGFVKMMNDKAAELGMKDTHFVNCNGLPAENHY 180

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGTFLGADGMKTGF 220
           T+A D+A++S  +        +    +        K     NTN  V  + GADG+KTG+
Sbjct: 181 TSAHDIAVMSRELLKYEQITKYTGSYQDYLRKDSQKPFWLVNTNKLVRFYTGADGLKTGY 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + F + A+A +     +AV++GA D  TRN   + +    F   T            
Sbjct: 241 TSEAKFCLSATAKRDGLRAVAVVMGAPDTKTRNNEVSRMFDYAFAQYTMHSIYKPGEVLG 300

Query: 281 YQQNLSNEVPNIS----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             +     VP +S     +     K+ +       E +  ++         ++   + 
Sbjct: 301 IVKVQKGNVPELSIQADRDYSVLVKKGVKDPDIRHEIQMDQNVKAPVSAGQVIGKLLV 358


>gi|227329429|ref|ZP_03833453.1| penicillin-binding protein 6 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 401

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   +       L          Y L+D ++G V+AE+  D   +PASLTK+M +YV+
Sbjct: 18  VLLVGLVPFTYAEQLPAVPQIDAKAYILIDHHSGKVLAESNADERLDPASLTKIMASYVI 77

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDI 119
              +K  K   T  +T+ K+A                K G  + +    K ++++S ND 
Sbjct: 78  GQAIKSGKIRPTDEVTVGKDAWATGNPALRGSSLMFLKPGDRIPVSELNKGIVIQSGNDA 137

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++A+A+ +  ++  FV  MNN +K L L+ T+F+  HG+   G Y+TARDMA+L   +  
Sbjct: 138 SIALADYVAGSQDAFVSLMNNYAKALNLTNTNFLTVHGLDAPGQYSTARDMALLGQALIR 197

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L  DG+KTG T  +G N+VASA +G+  
Sbjct: 198 DVPEEYALHKEKEFTFNNIRQPNRNRLLWSTNLNVDGVKTGHTNGAGHNLVASATEGNMR 257

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA     R + S  LL+ GF        I        +  +          +++
Sbjct: 258 LISVVLGAQTDAIRFRESEKLLTWGFRFFETVTPIKTDAPFTTQRVWFGTEKEARLGVAQ 317

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +   T  +    N +     ++        K  ++   
Sbjct: 318 DAALTIPKGQMKNLKASFTLNQPQLSAPLTKNQVVGTI 355


>gi|153213833|ref|ZP_01949039.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 1587]
 gi|229510878|ref|ZP_04400357.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|229517999|ref|ZP_04407443.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC9]
 gi|229608471|ref|YP_002879119.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MJ-1236]
 gi|254848079|ref|ZP_05237429.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MO10]
 gi|124115667|gb|EAY34487.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 1587]
 gi|229344714|gb|EEO09688.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC9]
 gi|229350843|gb|EEO15784.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|229371126|gb|ACQ61549.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MJ-1236]
 gi|254843784|gb|EET22198.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MO10]
          Length = 391

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDIVGTLYYQ 353


>gi|296133162|ref|YP_003640409.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermincola sp. JR]
 gi|296031740|gb|ADG82508.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermincola potens JR]
          Length = 389

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/351 (24%), Positives = 148/351 (42%), Gaps = 18/351 (5%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +++ + + +   M++ +FP    A                L+D  TG V+ E   D    
Sbjct: 5   LKKLIGLFLLTTMITILFPTQGFAAPEQQPLLETTAESAILIDAVTGKVLFEKAADVERP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  V    L + K  L+  +  S+NAS    S    +    +++   L  + 
Sbjct: 65  PASVTKVMTLLVALEQLAKGKISLSDKVVTSENASGMGGSQVYLEPNEELSMREMLISIA 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V SAND  VA+AE +  + + +V+ MN+ +K LGL  THF NA+G+   GHYT+ARD+A+
Sbjct: 125 VGSANDACVAVAEHIAGSHEAYVKMMNDKAKELGLKHTHFANAYGLPAEGHYTSARDLAV 184

Query: 173 LSWRIKTDF-PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
           +            +   +   L        NTN  +  + G DG KTG+T  + + + ++
Sbjct: 185 MMREALKYPLFSKLTSIKRYDLRGGEFVLWNTNKLLWWYDGCDGGKTGWTSEAKYCLAST 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK------TDRKKINYIIKDFYQQNL 285
             +    LIAV++   +  +  + S  L + GF            KK+  I     Q + 
Sbjct: 245 CKRNGLRLIAVVMATPEPRSHFRESMRLYNYGFARYEAANIAEQGKKLGKIRVSKGQWDW 304

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            + V      +   + E  +   ++             +K   +      K
Sbjct: 305 VDAVTASDVAIVVPKGEKKSVTYKL---DLLPYVKAPVKKGQKVGQVTVMK 352


>gi|329929847|ref|ZP_08283523.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
 gi|328935825|gb|EGG32286.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
          Length = 396

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/356 (25%), Positives = 151/356 (42%), Gaps = 24/356 (6%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNK--------------LPYYTLLDTNTGHVIAE 44
           M++ L+   + +A+  +     S AE N                    LLD +TG +I E
Sbjct: 1   MKKALIAGFLVLAVGLSSAAVPSYAEENSKPGGGSSQEELAPSARSAILLDADTGTIIYE 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                   PAS+TK+MT  +    + E +  LT  +  S+ A+    S    + G  MT+
Sbjct: 61  KNSHDKLPPASITKVMTMLLTMEAIDEGQLKLTDKVRTSEYAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           D  LK + + S ND +VA+AE +  +E+ FV+ MN  +  LG+  THF+N +G+    HY
Sbjct: 121 DEMLKGIAMASGNDASVAMAEKIAGSEEGFVKMMNEKAAELGMKDTHFVNCNGLPAENHY 180

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGTFLGADGMKTGF 220
           T+A D+A++S  +        +    +        K     NTN  V  + GADG+KTG+
Sbjct: 181 TSAHDIAVMSRELLKYDQITKYTGAYQDYLRKDSEKPFWLVNTNKLVRFYTGADGLKTGY 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + F + A+A +     +AV++GA D  TRN   + +    F   T            
Sbjct: 241 TSEAKFCLSATAKRDGLRAVAVVMGAPDTKTRNNEVSRMFDYAFSQYTMHSIYKPGEVLG 300

Query: 281 YQQNLSNEVPNIS----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +     VP IS    ++     K+ +       E +   +         ++   
Sbjct: 301 IVKVQKGNVPEISIQAEKDYSVLVKKGVKNPDIRHEIQLDPNVKAPVAAGQVIGKL 356


>gi|153838852|ref|ZP_01991519.1| penicillin-binding protein 5 [Vibrio parahaemolyticus AQ3810]
 gi|260900530|ref|ZP_05908925.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AQ4037]
 gi|149747680|gb|EDM58590.1| penicillin-binding protein 5 [Vibrio parahaemolyticus AQ3810]
 gi|308107023|gb|EFO44563.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AQ4037]
          Length = 389

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 96/355 (27%), Positives = 148/355 (41%), Gaps = 19/355 (5%)

Query: 1   MRQFLVIIAMAM---------LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           MR+  +     +                +  A       Y L+D +TG V+ E   D   
Sbjct: 1   MRKITLFNTTFLTGLATFSHFAFAAPTVVPNAPELSSRGYVLMDYHTGKVLVERDADKRL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNAL 108
           NPASLTKLMTAYV    +      L   + IS+NA        S    +  ++++L +  
Sbjct: 61  NPASLTKLMTAYVAGQEVNAGNISLDDQVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLY 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + L+V+S ND +VAIAE +  +E  FV  MN+ +  LGL+ + F N HG+   G Y+T  
Sbjct: 121 RGLVVQSGNDASVAIAEHVAGSEAGFVSLMNSWASQLGLTNSSFTNPHGLDSDGLYSTPH 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A L   I  D P     +        G    N N       +  DGMKTG+T  +G++
Sbjct: 181 DIAKLGQAIIRDLPDIYPMYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYS 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           +  SA  GD  LIAV++GA  ++ R   S  LLS GF                    +  
Sbjct: 241 LATSATNGDMRLIAVVMGAKSQSVRESESKQLLSYGFRFYDTLMPTAAGTDIANARVWMG 300

Query: 284 NLSNEVPNISEEVCTTQKEII--NYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   ++ +V  T  +        +++   D  +     + +  L  K+  K
Sbjct: 301 QKDELKVGVNRDVYLTLPKGDVNKLKAEVEYNGDLLAPIAQDQVVGTLLYKVDGK 355


>gi|212636662|ref|YP_002313187.1| D-alanyl-D-alanine carboxypeptidase [Shewanella piezotolerans WP3]
 gi|212558146|gb|ACJ30600.1| D-alanyl-D-alanine carboxypeptidase [Shewanella piezotolerans WP3]
          Length = 421

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+  ++A  S          A T     Y LLD NTG +IAEN      NPASLTK
Sbjct: 39  IKTLLLATSVAAFSAQAAPVVTPNAPTVAAKAYVLLDYNTGQIIAENNAYESLNPASLTK 98

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K      +  +TISKNA        S    + G T++++   K +I++S
Sbjct: 99  MMTSYVIGHEIKVGNVSPSDEVTISKNAWSKNFPDSSKMFIEVGKTVSVEELNKGIIIQS 158

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H TTA DMAIL  
Sbjct: 159 GNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMQDSYFENSHGLDSDNHKTTAYDMAILGA 218

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            I  D P+    ++ K     G K  N N       L  DG+KTG T  +G+N+V SA +
Sbjct: 219 AIIRDVPEEYAVYKEKSFTYNGIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYNLVTSATK 278

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVP 290
               LI+V++G      R   S  LL+ GF                 +  +  +      
Sbjct: 279 DGMRLISVVMGTKSETARKAESKKLLNYGFRFFETVTPYQAGDSFVTQKIWYGDRETIDL 338

Query: 291 NISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            ++ +  +  ++ +  N     +  K+ ++     E +  +  ++  K
Sbjct: 339 GVTTDTPITISRGQAKNLQANFELTKELKAPIAKGETVGRIYFQLNGK 386


>gi|271500864|ref|YP_003333889.1| beta-lactamase [Dickeya dadantii Ech586]
 gi|270344419|gb|ACZ77184.1| Beta-lactamase [Dickeya dadantii Ech586]
          Length = 402

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/337 (25%), Positives = 150/337 (44%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           I+           +          + L+D  +G V+AE+  D   +PASLTK+M++YV+ 
Sbjct: 20  ILMAVSPVLQAEQMPPPPQIDAKAFILIDYGSGRVLAESNADTRLDPASLTKIMSSYVIG 79

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+ K+A                K G  +++ +  K ++++S ND +
Sbjct: 80  QAIKVGKITPEDKVTVGKDAWAGGNPTLRGSSLMFLKPGDQISVSDLNKGIVIQSGNDAS 139

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  FV  MN  +  LGL+ THF+  HG+   G Y+TARDMA L+  +  D
Sbjct: 140 IALADYVAGSQNAFVSLMNQYAATLGLTNTHFLTVHGLDTPGQYSTARDMARLTQALIRD 199

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P        K       + PN N     + L  DG+KTG+T  +G ++VASA+ GD  L
Sbjct: 200 VPSEYALHSEKEFTFNNIRQPNRNRLLWSSNLRVDGVKTGYTDGAGHSLVASAVDGDMRL 259

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE 295
           I+V+LGA     R + S  LL+ GF        I        +  +  +       ++++
Sbjct: 260 ISVVLGAPSDTIRFRESEKLLTWGFRFFETATLIRSDTPFTTQRVWLGSEKQVRLGVAQD 319

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T  +    N +      +       +K  ++   
Sbjct: 320 AAMTVLKGQAKNLKASFTLAQRQLQAPLKKGQVVGTI 356


>gi|319645178|ref|ZP_07999411.1| DacF protein [Bacillus sp. BT1B_CT2]
 gi|317392987|gb|EFV73781.1| DacF protein [Bacillus sp. BT1B_CT2]
          Length = 395

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK---------LPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + +  +  +    ++A+ +               L++ +TG V+ +       
Sbjct: 6   MKRHLSKLLIFTIILMTAPSALAKESAKKPSELADDAKSAVLIERDTGKVMYDKNSREKL 65

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L E K  +   +  S+ A+    S    + G  MT+++ LK +
Sbjct: 66  PPASMTKVMTMLLIMEALDEGKIKMKDKVRTSEYAASMGGSQIFLEPGEEMTVEDMLKGI 125

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FV+ MN  +  LGL  T F N  G+ + GHY+TA DMA
Sbjct: 126 AIGSGNDASVAMAEHIAGSEEEFVKRMNEKAAELGLKDTSFQNTTGLPEEGHYSTAYDMA 185

Query: 172 ILSWRIKTDFPQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +++  +            +   ++    K     NTN  +  + G DG+KTGFT  + + 
Sbjct: 186 LMAKELLKYENITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGFTNEAKYC 245

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNL 285
           + ASA +G+  +IAV+ GA     RN     +L   F           N II D      
Sbjct: 246 LTASAKKGNMRVIAVVFGASTPKERNAQITKMLDFAFSQYETHPMYKRNEIISDLKVNKG 305

Query: 286 SNEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             +  N+  SE +    K+  N  +  KE K KE      +K T L   + KK
Sbjct: 306 REQKINLVTSEPISLLTKKGENIESVKKEIKQKEDIQAPVKKGTELGTLVLKK 358


>gi|294666894|ref|ZP_06732125.1| penicillin-binding protein 6 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603342|gb|EFF46762.1| penicillin-binding protein 6 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 401

 Score =  207 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSTAYDLAMLGRAMVRDYPETYAYNKIKEFQVGNIKQSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ LIAV++G      R   S +LL+ 
Sbjct: 229 RNRLLWRAPAVDGIKTGHTSEAGYCLLSSAKRGDQRLIAVVMGDNSEEQRATDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+  K+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVPKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 349 QAPIKQGQQVGTVKVSLDGK 368


>gi|293375491|ref|ZP_06621770.1| putative D-alanyl-D-alanine carboxypeptidase [Turicibacter
           sanguinis PC909]
 gi|292645891|gb|EFF63922.1| putative D-alanyl-D-alanine carboxypeptidase [Turicibacter
           sanguinis PC909]
          Length = 389

 Score =  207 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 9/340 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L   + + L +     +           L++  TG ++ E  P     PAS+TK+M+ Y
Sbjct: 10  LLTCFSFSCLVHSKIVSADELVTDGKAAILIEAETGEILYEKNPHEQLAPASMTKMMSMY 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++   +          I +S+NA+ Y  S    K G  M + +  K + + SAND   A+
Sbjct: 70  LILESIHNGALQWDEVIRVSENAASYGGSQIYLKPGEKMIVRDLFKSIAIASANDSVTAL 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E+ FV+ MN  +K LG++ T F N  G+   GH TT  DM+I++  +  D+P+
Sbjct: 130 AERVAGSEEAFVELMNQKAKELGMNNTVFKNPTGLTAAGHVTTPYDMSIIARHLLQDYPE 189

Query: 184 YMHY-----FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              +       I+          NTN  +    G DG+KTGFT  +G+ + A+A +    
Sbjct: 190 ITEFSGLYEDYIRQDTESPFWLVNTNKLIKYVDGVDGLKTGFTQEAGYCLTATAQRNGMR 249

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           +IAV++GA     RN+    L+   +       K+   +             +      +
Sbjct: 250 VIAVVMGASKSEIRNQEVTRLIEYAYEQYELVPKLESGLVVSSGHHLLAKTRDFDIVTGD 309

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           ++   +K+              E   +  +    +     
Sbjct: 310 QITILKKKTDGEGETNYTVTLNEEIILPIQPGDEVGTLTY 349


>gi|157962970|ref|YP_001503004.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella pealeana ATCC
           700345]
 gi|157847970|gb|ABV88469.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella pealeana ATCC
           700345]
          Length = 390

 Score =  207 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 156/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L   ++A LS          A T     Y L+D NTG +IAE       NPASLTK
Sbjct: 8   LKTLLFATSVAALSAHAAPVVTPNAPTVAAKAYVLMDYNTGQIIAEENAYESLNPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K      +  +TISK A        S    + G  +T+++  K +I++S
Sbjct: 68  MMTSYVIGHEIKVGNVSPSDEVTISKKAWSKNFPDSSKMFIEVGKKVTVEDLNKGIIIQS 127

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H +TA DMAIL  
Sbjct: 128 GNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMQDSYFENSHGLDSDNHKSTAYDMAILGA 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            I  D P+    ++ K     G K  N N       L  DG+KTG T  +GFN+V SA +
Sbjct: 188 AIIRDVPEEYAVYKEKSFTYNGIKQYNRNGLLWDKSLSVDGIKTGHTSGAGFNLVTSATK 247

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G      R   S  LL+ GF                 Q+    +   I  
Sbjct: 248 DGMRLISVVMGTKSEAARKAESKKLLNYGFRFFETVTPYKAGDTFVTQKIWYGDRETIDL 307

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++ +  N     +  K+  +     E +  +  ++  K
Sbjct: 308 GVVTDTPITISRGQAKNLQANFELTKELNAPIAKGETVGRVYFQLNGK 355


>gi|163737219|ref|ZP_02144637.1| Serine-type D-Ala-D-Ala carboxypeptidase [Phaeobacter gallaeciensis
           BS107]
 gi|161389823|gb|EDQ14174.1| Serine-type D-Ala-D-Ala carboxypeptidase [Phaeobacter gallaeciensis
           BS107]
          Length = 529

 Score =  207 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 157/316 (49%), Gaps = 5/316 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++I ++M++   P    A         ++D  TG V+     D   +PASLTK+MT Y+ 
Sbjct: 29  LVIFLSMVATAPPGAMAAP----YAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIA 84

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  ++  +  L T + IS+NA+   PS    K G  +     ++   VKSAND A AI E
Sbjct: 85  FEAVRNGEISLDTKVKISRNAASEQPSKLGLKTGQRIAFRYLIRAAAVKSANDAATAIGE 144

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           +L  +E  F + M  T+K LG+S T F NAHG+ Q GH +TARDM  L   +  D+P+Y 
Sbjct: 145 TLAGSEAAFARRMTRTAKALGMSRTTFKNAHGLTQKGHMSTARDMTTLGRHLLYDYPEYY 204

Query: 186 HYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           + F  +  +   +K PNTN   +  + GADG+KTG+T A+GFN+VASA +G++ +IA + 
Sbjct: 205 NLFSRRSTDAGVRKVPNTNRRLLAAYRGADGIKTGYTRAAGFNLVASAERGNERVIATVF 264

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G     +RN   A LL +GF     R K+    +  YQ N        S    T      
Sbjct: 265 GGKSSTSRNAKVAELLDLGFRRAPSRAKLRRPARPPYQGNRGLGTQLASAGDSTPNGAAG 324

Query: 305 NYNTQMKEAKDKESHF 320
                    K      
Sbjct: 325 KTIRVSGLVKTSLRPK 340


>gi|270262090|ref|ZP_06190362.1| D-alanyl-D-alanine carboxypeptidase [Serratia odorifera 4Rx13]
 gi|270043966|gb|EFA17058.1| D-alanyl-D-alanine carboxypeptidase [Serratia odorifera 4Rx13]
          Length = 389

 Score =  207 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 100/353 (28%), Positives = 158/353 (44%), Gaps = 23/353 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS---------IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ ++ +   +L  +    +                  Y L+D  TG V+AEN  D   
Sbjct: 1   MKRSVLSVMTGVLLPLAVQAADAPLSFPLNTPPAIDAASYVLMDYTTGQVLAENNADERR 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           NPASLTKLMT  V+   L + K  L   +T+ K+A                K G  +T+ 
Sbjct: 61  NPASLTKLMTGLVIDHALDQHKIGLDDVVTVGKDAWAQGNPVFKGSSLMFLKPGDRVTVR 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           +  + +I+ S ND  VA+A+ +  ++  FV+ MN  S  LGL  THF   HG+   G +T
Sbjct: 121 DLSRGIIIDSGNDACVAMADYVAGSQAAFVKLMNEKSTQLGLQNTHFETVHGLDAPGQFT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           TA D+A++S  I    P   H +  K L   G    N N       L  DG+KTG T ++
Sbjct: 181 TAGDLAVISRAIIMSEPAEYHMYSEKSLSWNGITQQNRNGLLWDKNLRVDGLKTGHTASA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFY 281
           GFNI+ASA +GD+ LIAV++G      R   +  LL+ G  +       +      ++  
Sbjct: 241 GFNIIASATEGDRRLIAVVMGGKSAKGREDQARKLLTWGLRDFATVHLFSAGQTLGQEKV 300

Query: 282 QQNLSNEVPNISEE---VCTTQKEIINYNTQ-MKEAKDKESHFIDFEKITLLK 330
                + VP  SE+   +   ++E      Q + +    E+     + I  ++
Sbjct: 301 WYGDRHLVPVGSEQDQYLSLPKREADKLKAQYVIKPSRLEAPLAQGQPIGEIR 353


>gi|148244582|ref|YP_001219276.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326409|dbj|BAF61552.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 375

 Score =  207 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/336 (30%), Positives = 163/336 (48%), Gaps = 3/336 (0%)

Query: 3   QFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +FL I+  +   NI   +     A       Y+++D N+G VIA N   +   PASLTKL
Sbjct: 8   KFLTILICSFTLNIQAAIFITPKAPEISAVAYSIVDYNSGKVIASNKQHYKRAPASLTKL 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAYV+F  +   +  L   + ISK A +   S S  + G TM L+  LK +I++S ND 
Sbjct: 68  MTAYVIFQLISNDRIKLEDEVRISKKAWKTGGSKSFVEVGKTMKLETLLKGMIIQSGNDS 127

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVA+AE +   E  F  +MN  ++ LG++ + F NA G+  +  YTTA D+ +L+  I  
Sbjct: 128 AVALAEHIAGDESTFTTYMNKYARKLGMNNSQFRNASGLPDNNQYTTAADIVLLATAIIK 187

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           DFPQ+  ++  K     G K  N N  +      DG+KTGFT  +G+N+VASA +    L
Sbjct: 188 DFPQFYLWYSEKEFTYHGIKQYNRNKLLWNDHTVDGLKTGFTKKAGYNLVASAKRLGMRL 247

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I+V+LG+   N R   +  +L  GF     +   N   +     +  N +   + ++ + 
Sbjct: 248 ISVVLGSSSVNDRTSQTQKILDYGFRFFETKTIRNIKKELPIANSTKNMLKVGTSKIISF 307

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 +    +  +   +      K  ++   + +
Sbjct: 308 TLARGQFKFSDQVIQLDTALSAPINKGDVVGKLLIQ 343


>gi|117924769|ref|YP_865386.1| penicillin-binding protein 6 [Magnetococcus sp. MC-1]
 gi|117608525|gb|ABK43980.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Magnetococcus sp. MC-1]
          Length = 386

 Score =  207 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 82/335 (24%), Positives = 148/335 (44%), Gaps = 5/335 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++   +  +      +    +     + D ++G ++ +   D P  PASLTK+MT Y+
Sbjct: 17  LALMVTILAGSQAWAEGLPFHVRAKAAIMGDIDSGAILFDQNSDMPLPPASLTKVMTLYL 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           ++  L++    L T + +S+NA +   S +  K G  + +++ ++ + V+S ND  V +A
Sbjct: 77  LYEALQKGDITLETSMPVSRNAWQREGSKTFVKVGDKIRVEDLIRGIAVQSGNDACVVVA 136

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +EK F   MN  +  LG+ A+HF NA G+   GH ++ARD  IL+  +   FP+Y
Sbjct: 137 EYLGGSEKGFADMMNAKAAALGMEASHFANASGLPAPGHQSSARDFFILTAALMKHFPEY 196

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            HY Q K     G +  N N  +       G+KTG T  +G+ ++A   +  Q L +V++
Sbjct: 197 AHYVQQKEYTFNGIRQVNRNHLLWKDKYITGLKTGHTSEAGYCLIAVREKDGQRLCSVVM 256

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQ 300
           G+     R + S  LL  G  +                  ++ +       I   +  T 
Sbjct: 257 GSSSTEVREEESMRLLHYGNRSFETVNLFEAGATVRTLRVWKGSQKEVDGVIYNPMRITV 316

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +      +     + E       +   L + + K
Sbjct: 317 PKRQRGALEAGIVFN-EPLVAPVRQGQALGSLVVK 350


>gi|296332281|ref|ZP_06874743.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674982|ref|YP_003866654.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150595|gb|EFG91482.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413226|gb|ADM38345.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 389

 Score =  207 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L  + + ++   F   + A+          ++     L++ +TG V+     +   
Sbjct: 1   MKRLLSTLLIGIMLLTFAPSAFAKQDGKGTSELAHEAKSAVLIERDTGKVLYNKNSNERL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L E K  ++  +  S++A+    S    + G  MT+   LK +
Sbjct: 61  APASMTKIMTMLLIMEALDEGKIKMSDKVRTSEHAASMGGSQIFLEPGEEMTVKEMLKGI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND +VA+AE +  +E++FV+ MN  ++ LGL  T F N  G+ + GH+++A DMA
Sbjct: 121 AIASGNDASVAMAEFISGSEEEFVKKMNKKARELGLKNTSFKNPTGLTEEGHFSSAYDMA 180

Query: 172 ILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           I++  +            +   ++    K     NTN  +  + G DG+KTG+T  + + 
Sbjct: 181 IMAKELLKYESITKFTGTYEDYLRENTDKKFWLVNTNRLIKFYPGVDGVKTGYTGEAKYC 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           + ASA +G+   IAV+ GA     RN     +L   F                  +    
Sbjct: 241 LTASAKKGNMRAIAVVFGASTPKDRNAQVTKMLDFAFSQYETHPLYKRNEIVAKVKVKKG 300

Query: 288 EVP----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +        SE +    K+  +     KE K  ++     +K   L   + KK
Sbjct: 301 KQKFIELTTSEPISILTKKGEDMKNVKKEIKLNDNVSAPVQKGQELGTLVLKK 353


>gi|163740370|ref|ZP_02147764.1| D-alanyl-D-alanine carboxypeptidase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161386228|gb|EDQ10603.1| D-alanyl-D-alanine carboxypeptidase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 550

 Score =  207 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 107/316 (33%), Positives = 157/316 (49%), Gaps = 5/316 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++I ++M++   P    A         ++D  TG V+     D   +PASLTK+MT Y+ 
Sbjct: 50  LVIFLSMVATAPPGAMAAP----YAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIA 105

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  ++  +  L T + IS+NA+   PS    K G  +     ++   VKSAND A AI E
Sbjct: 106 FEAVRNGEISLDTKVKISRNAASEQPSKLGLKTGQRIAFRYLIRAAAVKSANDAATAIGE 165

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           +L  +E  F + M  T+K LG+S T F NAHG+ Q GH +TARDM  L   +  D+P+Y 
Sbjct: 166 TLAGSEAAFARRMTRTAKALGMSRTTFKNAHGLTQKGHMSTARDMTTLGRHLLYDYPEYY 225

Query: 186 HYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           + F  +  +   +K PNTN   +  + GADG+KTG+T A+GFN+VASA +G++ +IA + 
Sbjct: 226 NLFSRRSADAGVRKVPNTNRRLLAAYRGADGIKTGYTRAAGFNLVASAERGNERVIATVF 285

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G     +RN   A LL +GF     R K+    +  YQ N        S    T      
Sbjct: 286 GGKSSTSRNAKVAELLDLGFRRAPSRAKLRRPARPPYQGNRGLGTQLASAGDSTPNGAAG 345

Query: 305 NYNTQMKEAKDKESHF 320
                    K      
Sbjct: 346 KTIRVSGLVKTSLRPK 361


>gi|153215272|ref|ZP_01949916.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 1587]
 gi|124114811|gb|EAY33631.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 1587]
          Length = 389

 Score =  207 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 147/345 (42%), Gaps = 16/345 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHTDDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSN 287
           A  G+  LI+V++G+    +R   S  LLS GF                    +  + + 
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNE 304

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++ V  T               DK +      K  ++ + 
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDK-TLEAPIAKGDVVGSI 348


>gi|219871407|ref|YP_002475782.1| D-alanyl-D-alanine carboxypeptidase fraction A/penicillin-binding
           protein 5 [Haemophilus parasuis SH0165]
 gi|219691611|gb|ACL32834.1| D-alanyl-D-alanine carboxypeptidase fraction A/penicillin-binding
           protein 5 [Haemophilus parasuis SH0165]
          Length = 393

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 95/322 (29%), Positives = 145/322 (45%), Gaps = 8/322 (2%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            A       Y L+D N+G V+A   PD    PASLTK+MT+YVV   LK  K   +  +T
Sbjct: 33  AAPQLNAQTYILMDYNSGAVLASLNPDQRQAPASLTKMMTSYVVGEALKTGKIKNSDLVT 92

Query: 82  ISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +++N+        S         +++++  K +IV S ND  VAIAE +  +E+ F+  M
Sbjct: 93  VTENSWGQKFPGSSKMFLNVNQQVSVEDLNKGIIVVSGNDACVAIAEHISGSEQTFIDSM 152

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   +  GL  THF   HG+     Y++ARDMAI+   I  D P+    +  K       
Sbjct: 153 NKFVQKFGLKNTHFATVHGLDHPEQYSSARDMAIIGAHIIRDLPEEYKIYSEKEFTYNKI 212

Query: 199 KYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
             PN N       +  DGMKTG T  +G+N+VASA   +  LI+V++G      R   S 
Sbjct: 213 TQPNRNGLLWDKSINVDGMKTGHTDQAGYNLVASAYNSNTRLISVVMGVPTYKGREVESK 272

Query: 258 SLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            LL  GF N    K ++       +  Y  +LS       ++   T  +      + +  
Sbjct: 273 KLLQWGFANFETVKPLSAGQSVLEQAVYYGDLSKAQLGTLQDSYITVPKGKTAELKARYT 332

Query: 314 KDKESHFIDFEKITLLKNKITK 335
            +K +      K  ++   I +
Sbjct: 333 LEKTNLEAPLVKGQVVGKVIYQ 354


>gi|325920074|ref|ZP_08182046.1| penicillin-binding protein 6 [Xanthomonas gardneri ATCC 19865]
 gi|325549444|gb|EGD20326.1| penicillin-binding protein 6 [Xanthomonas gardneri ATCC 19865]
          Length = 401

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 155/320 (48%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 49  SKSWILMDYATGQVLAGENIHQQLAPASITKVMTSYVVAAEIKNGKVKRDDQVMMSERAW 108

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 109 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 168

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH++TA D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 169 AKIGMKDSYFVNAHGLSAEGHHSTAYDLAMLGRAMVRDYPETYAYNKIKEFQVGTIKQNN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ L+AV++G      R   S +LL+ 
Sbjct: 229 RNLLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLVAVVMGDSSERQRADDSLALLNW 288

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           GF                 +  ++         +++   V   +    +    M+ AK+ 
Sbjct: 289 GFRFFETHSLYAPGKVVTKQKVWKGQQDEVQLGVAQPLLVSLQRGRYNDLKPSMEVAKNL 348

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     ++I  +K  +  K
Sbjct: 349 QAPIKKGQQIGTVKVSLDGK 368


>gi|254251303|ref|ZP_04944621.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia dolosa
           AUO158]
 gi|124893912|gb|EAY67792.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia dolosa
           AUO158]
          Length = 460

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 15/338 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK
Sbjct: 89  ATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKK 148

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 149 ISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 208

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN+ ++ LG+ +THF + +G+    HYTTA D+A LS  +  DFPQY   F  K
Sbjct: 209 AQFVTMMNDEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEK 268

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
             +    +  N N  +      DG+KTG T A+G+ +++SA +         + L+AV++
Sbjct: 269 EFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLISSAKRAIPGTADAQRRLVAVMM 328

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +     +  +  V  
Sbjct: 329 GEPKESDRTQDSMKMLNYGYSAFDAVRLFKAGQAIATPRIYKGKDNTVQVGVKSDQWVTV 388

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +        ++       +     +++  +K     K
Sbjct: 389 PRGLGDKVKPEVDVNAPLIAPLAQGQQVGTVKVVADGK 426


>gi|21232885|ref|NP_638802.1| penicillin-binding protein 6 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767044|ref|YP_241806.1| penicillin-binding protein 6 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990136|ref|YP_001902146.1| exported serine-type D-Ala-D-Ala carboxypeptidase [Xanthomonas
           campestris pv. campestris str. B100]
 gi|21114716|gb|AAM42726.1| penicillin-binding protein 6 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66572376|gb|AAY47786.1| penicillin-binding protein 6 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167731896|emb|CAP50080.1| exported serine-type D-Ala-D-Ala carboxypeptidase [Xanthomonas
           campestris pv. campestris]
          Length = 403

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 11/320 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + L+D  TG V+A         PAS+TK+MT+YVV + +K  K      + +S+ A 
Sbjct: 51  SKSWILMDYATGQVLAGENIHQELAPASITKVMTSYVVAAEIKNGKISRDDQVMMSERAW 110

Query: 88  E-----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                    S S F    T  L++  K + ++S ND A+A+AE +  +E+ F   MN+ +
Sbjct: 111 REGGAGTDGSYSGFPVNQTARLEDMEKGMAIQSGNDAAIALAEHVAGSEEAFASLMNSYA 170

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +G+  ++F+NAHG+   GH+++A D+A+L   +  D+P+   Y +IK  ++   K  N
Sbjct: 171 AKIGMKNSYFVNAHGLSAEGHHSSAYDLAMLGRAMVRDYPETYAYNKIKEFQVGTIKQNN 230

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +      DG+KTG T  +G+ +++SA +GDQ L+AV++G      R   S +LL+ 
Sbjct: 231 RNLLLWRDPAVDGIKTGHTSEAGYCLLSSAKRGDQRLVAVVMGDTSERQRADDSLALLNW 290

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEAKDK 316
           GF                 Q+    E   +   V         +    +    M+ AK+ 
Sbjct: 291 GFRFFETHSLYAPGKVVTKQKVWKGEQDEVQLGVAQPLLVSLQRGRYKDLKPSMEVAKNL 350

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +++  +K  +  K
Sbjct: 351 QAPIKKGQQVGTVKVSLEGK 370


>gi|295675328|ref|YP_003603852.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp.
           CCGE1002]
 gi|295435171|gb|ADG14341.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp.
           CCGE1002]
          Length = 409

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++   ++++               + L+D  +  V+A    D    PASLTKLMTAY+V
Sbjct: 30  LVLPATLVASTAFAQVPPPGVNARSWVLVDATSNQVLASANADERVEPASLTKLMTAYLV 89

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L  KK  +   I  S+         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 90  FEALDTKKITMDQSIEPSEAVRRVRNDESRMFIEALKPVTVHDLVYGMIVQSGNDAAIAL 149

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+AILS R+  D+P 
Sbjct: 150 AELVGGSEAQFVDMMNKEAQKLGMKNTHFADVNGMPDPQHYTTAGDLAILSARLIRDYPD 209

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 210 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRPLPGTTDAS 269

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+ +  +    +
Sbjct: 270 RRLVSVMMGETKEHDRVQDSLKMLNYGYTAYDTTRLYKANQVVATPRVYKGSQDSVQVGV 329

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q++      +   + ++I   K
Sbjct: 330 KSDQYITLPKGAGDKAKPQIELNDPLIAPIANGQQIGTAK 369


>gi|296160368|ref|ZP_06843185.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. Ch1-1]
 gi|295889349|gb|EFG69150.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. Ch1-1]
          Length = 410

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++   + ++               + L+D  +  V+A    D    PASLTKLMTAY+V
Sbjct: 31  IVLPATLAASTAFAQVPPPAVNARSWVLVDATSNQVLASGNADERVEPASLTKLMTAYLV 90

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L+ KK  +   +  S+         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 91  FEALQTKKINMDQTVMPSEAVRRVRTDESRMFIEANKPVTVHDLVYGMIVQSGNDAAIAL 150

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+AILS R+  DFP 
Sbjct: 151 AELVGGSESQFVNMMNTEAQRLGMKHTHFADVNGMPDPQHYTTAGDLAILSARLIRDFPD 210

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 211 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGTTDAS 270

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+         +
Sbjct: 271 RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVRLYKANQVVGTPRVYKGAQDTVQIGV 330

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q+++     +   + +++  +K
Sbjct: 331 KSDQYITVPKGMGDKVKPQIEQIDPLIAPLANGQQVGTVK 370


>gi|152971007|ref|YP_001336116.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895589|ref|YP_002920324.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330000619|ref|ZP_08303760.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella sp. MS 92-3]
 gi|150955856|gb|ABR77886.1| DD-carboxypeptidase, penicillin-binding protein 6b [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547906|dbj|BAH64257.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|328537943|gb|EGF64124.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella sp. MS 92-3]
          Length = 389

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 145/346 (41%), Gaps = 19/346 (5%)

Query: 6   VIIAMAMLSNI--------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           + IA+++L++          P      + +   + L+D  TG V+         NPASLT
Sbjct: 7   LFIAVSLLASSVSCAFAVDLPATVAPPSIQAGSWVLMDYTTGQVLTAGNEHQQRNPASLT 66

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   +   +      +T+ K+A                K G  +++ +  + L
Sbjct: 67  KLMTGYVVDRAIDSHRITFDDIVTVGKDAWAKGNPVFDGSSLMFLKPGDRVSVRDLSRGL 126

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV S ND  VA+A+ +   + +FV  MN   + L L  THF   HG+   G +++A D+A
Sbjct: 127 IVDSGNDACVALADYVAGGQPQFVALMNQYVEKLHLRDTHFETVHGLDAPGQHSSAYDLA 186

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  I    P   H +  K L   G    N N       +  DG+KTG T  +GFN++A
Sbjct: 187 VLSRAIIHGEPDVYHMYSQKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIA 246

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLS 286
           SA+ G + LIAV++GA     R + +A LL  G  N    + +    K      +  +  
Sbjct: 247 SAVDGQRRLIAVVMGADSPKGREQQAAKLLHWGQQNFDTVQVLQKGQKVGTERIWYGDKE 306

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                  ++      +      + K   DK+           +   
Sbjct: 307 QIKLGTDQDFWLALPKAEVSRIKAKYVLDKKDLEAPIAANQRVGEI 352


>gi|47779364|gb|AAT38593.1| predicted penicillin-binding protein 6 precursor [uncultured gamma
           proteobacterium eBACHOT4E07]
          Length = 382

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 158/338 (46%), Gaps = 6/338 (1%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+Q FL ++ ++ +     F+  A    L  Y L++ +T  VIAE+       PAS+TK+
Sbjct: 1   MKQIFLFLLCVSNIVVGQSFVPNAPELNLKSYMLIEPDTNTVIAESNASGLIEPASMTKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAYVV   +K     L   + IS+ A     S    + G  +++ + LK +I++S ND 
Sbjct: 61  MTAYVVADQIKNDLISLDDSVLISEKAWRMGGSKMFIEVGKRVSILDLLKGIIIQSGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VAIAE +  TE  FV  MN+ +  LG++ T F+N+ G+   GH T+ARD+A L+    T
Sbjct: 121 SVAIAEYVGGTEAGFVDLMNSYAGALGMADTTFINSTGLPNEGHLTSARDLATLTSNFMT 180

Query: 180 DFPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           +FP     F+ K  E  G      N N  +     +DG+KTG T ++G+ ++ SA +G+ 
Sbjct: 181 NFPDIYALFKEKEFEYGGITGNKYNRNKLLWRDESSDGVKTGHTSSAGYCLIGSAKRGNM 240

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISE 294
            LI V+ G+   N     +  LL  GF     +K  +   +          ++ +     
Sbjct: 241 RLITVVAGSDTANNSFSDTQRLLEYGFRFYATQKYFDADKEYTTAKVWGGKNDNISLGVV 300

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E  +      ++         K +     ++   L   
Sbjct: 301 EDISITLPRTSFKNVKVNFNVKNNVQAPIKRGDKLGTL 338


>gi|319427343|gb|ADV55417.1| Beta-lactamase [Shewanella putrefaciens 200]
          Length = 391

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 153/342 (44%), Gaps = 11/342 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I ++++       +    A T     Y L+D  +G +IAE+      NPASLTK
Sbjct: 9   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAESNAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISKNA        S    + G T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSPEDDVTISKNAWSKNFSDSSKMFIEVGKTVKVADLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ SK LG+  ++F N+HG+    H TTA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSDNHKTTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDVPEEYRVYSEKFYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVP 290
               LI+V++G      R   S  LL+ GF                 +  +  + S    
Sbjct: 249 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETITPYKAGDNFTTQQIWYGDKSTVDL 308

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            ++ +   T       + +      K       +K   +   
Sbjct: 309 GVATDTPITVSRGRAKDLKANFELTKP-LDAPLKKGETVGRL 349


>gi|297180556|gb|ADI16768.1| d-alanyl-d-alanine carboxypeptidase [uncultured gamma
           proteobacterium HF0010_11B23]
          Length = 368

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 7/329 (2%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           M +   +   +       +  Y L + NT  V+     D P  PASLTKLMT+YVV  ++
Sbjct: 1   MVLSFIVSAAIPNPPDLGVGSYVLYEPNTKKVLVSFNADEPVQPASLTKLMTSYVVADYI 60

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE    L     IS  A +   S    ++G+ + + + +K +I++S ND +VA+AE +  
Sbjct: 61  KEDFIRLDDTPKISIKAWKTEGSRMFIREGTKVAVSDLIKGMIIQSGNDASVALAEHVAG 120

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E+ F   MN  +  LG+  + F NA G+    + T+A D+A+L+  +  +FP++   + 
Sbjct: 121 SEENFAYLMNEYASQLGMQNSSFNNASGLPDPLNVTSAYDLALLTSALINNFPEHYKLYS 180

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            K     G K PN N  +      DG KTG+   +G+ +V SA++GD  L+AV+LG+ D 
Sbjct: 181 EKSYTYAGIKQPNRNRLLWRSDIFDGAKTGYHSQAGYCLVGSAMRGDMRLVAVVLGSEDD 240

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTT--QKEI 303
             R    ++L+  GF + T  K  + +              N    ++E++  T  + + 
Sbjct: 241 K-RFNDVSALMDYGFRHFTTEKLFSKLETYKELKVIAGVKENVPVGLTEDIILTLQKNKR 299

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNK 332
            + + ++  +    +     EK   LK  
Sbjct: 300 DDLSFELSLSSQVLAPINAMEKAGTLKVI 328


>gi|153826135|ref|ZP_01978802.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MZO-2]
 gi|149740158|gb|EDM54317.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MZO-2]
          Length = 391

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ +    F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSGTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDIVGTLYYQ 353


>gi|328471030|gb|EGF41941.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus 10329]
          Length = 389

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 98/352 (27%), Positives = 147/352 (41%), Gaps = 18/352 (5%)

Query: 1   MRQ-------FLVIIAMA--MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           MR+       FL  +A            +  A       Y L+D +TG V+ E   D   
Sbjct: 1   MRKNTLFNTTFLTSLATFSHFAFAAPTVVPNAPELSSRGYVLMDYHTGKVLVERDADKRL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNAL 108
           NPASLTKLMTAYV    +      L   + IS+NA        S    +  ++++L +  
Sbjct: 61  NPASLTKLMTAYVAGQEVNAGNISLDDQVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLY 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + L+V+S ND +VAIAE +  +E  FV  MN+ +  LGL+ + F N HG+   G Y+T  
Sbjct: 121 RGLVVQSGNDASVAIAEHVAGSEAGFVSLMNSWASQLGLTNSSFTNPHGLDSDGLYSTPH 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A L   I  D P     +        G    N N       +  DGMKTG+T  +G++
Sbjct: 181 DIAKLGQAIIRDLPDIYPMYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYS 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           +  SA  GD  LIAV++GA  ++ R   S  LLS GF                    +  
Sbjct: 241 LATSATNGDMRLIAVVMGAKSQSVRESESKQLLSYGFRFYDTLMPTAAGTDIANARVWMG 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                   ++ +V  T  +    N    E +          +  ++   + K
Sbjct: 301 QKDELKVGVNRDVYLTLPKSD-VNKLKAEVEYSGDLLAPIAQDQVVGKVLYK 351


>gi|297581327|ref|ZP_06943251.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC385]
 gi|297534643|gb|EFH73480.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC385]
          Length = 391

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      ++  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKRGDVVGTLYYQ 353


>gi|56963557|ref|YP_175288.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
 gi|56909800|dbj|BAD64327.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
          Length = 388

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 82/351 (23%), Positives = 154/351 (43%), Gaps = 17/351 (4%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++   + ++   +L       + A+               L++ +TG V+ E   D+  
Sbjct: 1   MKRKWNVSMLLFVLLFAYAGEAAFAKEKELPQLAENAASAILIERDTGEVLFEKDSDNML 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   ++E        +T+S+NA+    S    + G  M++D+ LK +
Sbjct: 61  PPASMTKIMTMLLIMEAIEEGTIKYEDMVTVSENAASMGGSQVFLEPGEEMSVDDLLKAI 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            + S ND AVA+AE +  TE++FV+ MN  +  LGL  T F N +G+ +  HY++A D+A
Sbjct: 121 AIASGNDAAVAMAEHIGGTEQEFVKMMNAKAAELGLENTQFQNPNGLPEADHYSSAHDLA 180

Query: 172 ILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +++  +           ++   ++    K     NTN  V  + G DG+KTGFT  + + 
Sbjct: 181 VMAKELLKYENITSYTGIYEDYLRKGTDKEFWLVNTNKLVKFYPGVDGLKTGFTQEAKYG 240

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQ 283
           + A+A +    +IAV++GA     RN    ++L   + + +  +              + 
Sbjct: 241 LTATAEKNGMRVIAVVMGAKTPKERNATITNMLDYSYSHYSTERLHERGDLIGEVPVIKG 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              +      E V    K+         + +  E+      K   +   I 
Sbjct: 301 KDRHVQAITPEPVSLLLKKGTKLEEIETKIELFENVEAPVTKGDAVGQLII 351


>gi|240950037|ref|ZP_04754345.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           minor NM305]
 gi|240295515|gb|EER46258.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           minor NM305]
          Length = 392

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 164/353 (46%), Gaps = 18/353 (5%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L+    + AMA+ S  +  ++      A       Y L+D N+G V+A   PD   
Sbjct: 1   MKKTLLKSVSLCAMALSSFAYADVNTDFGISAPQLNAQTYILMDYNSGAVLASLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MTAYVV   +K+ K   +  +T+++N+                + +++ + +
Sbjct: 61  YPASLTKMMTAYVVGDAIKQGKVRNSDMVTVTENSWAQKFPGSSLMFLDLNTQVSVGDLM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K LI+ S ND AVA+AE    +++ F+  MN  ++  GL  T+F   HG+     +++AR
Sbjct: 121 KGLIIVSGNDAAVALAEHTSGSQQAFIDQMNKYAQQFGLKNTYFTTVHGLDDPNQFSSAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   +  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGTHVIRDQPEEYKIYAEKEFQYNIKKPQPNRNGLLWDKTMNVDGMKTGHTDKAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQ 282
           N+VASA   +  LI+V++G      R   S  LL  GF N    K +        +  Y 
Sbjct: 241 NLVASATNSNTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKSLPAGQAIKEESVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            + +       ++   T  +  + + + +   D +S      K  ++   I +
Sbjct: 301 GDANKVQLGSVQDSFITIPKGKSADLKARYELDTKSLEAPLAKGQVVGKVIYQ 353


>gi|146312224|ref|YP_001177298.1| D-alanyl-D-alanine carboxypeptidase [Enterobacter sp. 638]
 gi|145319100|gb|ABP61247.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Enterobacter sp. 638]
          Length = 394

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAM-------AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  + +++       A+ ++   F       +   + L+D  TG ++         NPA
Sbjct: 9   RRLFIALSLLASSVTPALAADPLDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQQRNPA 68

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K G  +++ +  
Sbjct: 69  SLTKLMTGYVVDRAIDSHRITPDDMVTVGRDAWAKGNPVFDGSSLMFLKAGERVSVRDLS 128

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN   + LGL  THF   HG+   G +++A 
Sbjct: 129 RGLIVDSGNDACVALADYVAGGQPQFVNMMNEYVQKLGLRDTHFETVHGLDAPGQHSSAY 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P + H +  K L   G    N N       L  DG+KTG T  +GFN
Sbjct: 189 DLAVLSRAIIHGEPDFYHMYSEKSLTWNGVTQQNRNGLLWDKNLKVDGLKTGHTSGAGFN 248

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAVI+G      R   +  LL  G  N    + ++   K      +  
Sbjct: 249 LIASAVDGQRRLIAVIMGGESPKGREDQARKLLHWGQQNFDTVQILHNGKKVGTERIWYG 308

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +      ++      +    N + K   DK+           +   
Sbjct: 309 DKEHISLGTDQDFWLALPKAEVANIKAKYVLDKKELEAPIAAHQRVGEI 357


>gi|323702537|ref|ZP_08114200.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532511|gb|EGB22387.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 405

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 78/320 (24%), Positives = 128/320 (40%), Gaps = 4/320 (1%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       L+D N+G V+ +  PD     AS+TKLMT  ++     + K  LT  +
Sbjct: 50  PAQLNTTAESAILMDYNSGQVLFQKDPDTRRPMASVTKLMTMLLICEAEAQGKIKLTDKV 109

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             S++A     S    + G  +T+   L  +   SAND +VA+AE +  +E+ FV  MN 
Sbjct: 110 VASEHACSMGGSQIFLEPGEQLTIKEMLISIATGSANDASVAMAEQIAGSEEAFVAMMNE 169

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGLEIKGKK 199
            ++ +GL  THF N  G+    HYT+ARDMA +          + +       L     K
Sbjct: 170 KAQAMGLKNTHFSNPTGLPVENHYTSARDMAKVLRECLRYPVFREVSKIYEYDLRGGEFK 229

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             NTN  +  + G D  KTG+T  + F + ASA +    LI+V+LG     T  + +  +
Sbjct: 230 LWNTNKLLKWYPGTDAGKTGWTNEAKFCLAASAKRDGLRLISVVLGCPMPKTHFQETMKI 289

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK---EIINYNTQMKEAKDK 316
            + GF                  +    ++  +                  T   +    
Sbjct: 290 FNYGFARYKAVNLAEEGQVIKVIKVDKGDLEKVKVITQAPVGLVVAKGQEKTVQGQINLP 349

Query: 317 ESHFIDFEKITLLKNKITKK 336
           +      +K  ++ N +  K
Sbjct: 350 DKLKAPVKKGQVVGNYVVTK 369


>gi|261405987|ref|YP_003242228.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp.
           Y412MC10]
 gi|261282450|gb|ACX64421.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp.
           Y412MC10]
          Length = 396

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 90/356 (25%), Positives = 150/356 (42%), Gaps = 24/356 (6%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNK--------------LPYYTLLDTNTGHVIAE 44
           M++ L+   + +A+  +     S AE N                    LLD +TG +I E
Sbjct: 1   MKKALIAGFLVLAVGLSSAAVPSYAEENSKPGGGSSQEELAPSARSAILLDADTGTIIYE 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                   PAS+TK+MT  +    + E +   T  +  S+ A+    S    + G  MT+
Sbjct: 61  KNSHDKLPPASITKVMTMLLTMEAIDEGQLKWTDKVRTSEYAASMGGSQIFLEPGEEMTV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           D  LK + + S ND +VA+AE +  +E+ FV+ MN  +  LG+  THF+N +G+    HY
Sbjct: 121 DEMLKGIAMASGNDASVAMAEKIAGSEEGFVKMMNEKAAELGMKDTHFVNCNGLPAENHY 180

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGTFLGADGMKTGF 220
           T+A D+A++S  +        +    +        K     NTN  V  + GADG+KTG+
Sbjct: 181 TSAHDIAVMSRELLKYDQITKYTGAYQDYLRKDSEKPFWLVNTNKLVRFYTGADGLKTGY 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + F + A+A +     +AV++GA D  TRN   + +    F   T            
Sbjct: 241 TSEAKFCLSATAKRDGLRAVAVVMGAPDTKTRNNEVSRMFDYAFSQYTMHSIYKPGEVLG 300

Query: 281 YQQNLSNEVPNIS----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +     VP IS    ++     K+ +       E +   +         ++   
Sbjct: 301 IVKVQKGNVPEISIQAEKDYSVLVKKGVKNPDIRHEIQLDPNLKAPVAAGQVIGKL 356


>gi|170728041|ref|YP_001762067.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella woodyi ATCC
           51908]
 gi|169813388|gb|ACA87972.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella woodyi ATCC
           51908]
          Length = 390

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 12/348 (3%)

Query: 1   MRQFLVI--IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  ++   +A + +         A T     + L+D NTG VIAE       NPASLTK
Sbjct: 8   LKSLILATSLASSFVFAAPVVTPNAPTVAAKAFVLMDYNTGQVIAEENAYESLNPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISK A        S    + G  +T+D+    +I++S
Sbjct: 68  MMTSYVIGHEIKVGNISPNDQVTISKKAWSKNFPDSSKMFIEVGKQVTVDDLNHGIIIQS 127

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F N+HG+    H TTA DMAIL  
Sbjct: 128 GNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMQDSYFENSHGLDSENHKTTAYDMAILGA 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    ++ K     G K  N N       +  DG+KTG T  +G+N+V SA +
Sbjct: 188 ALIRDVPEEYVLYKKKSFTYNGIKQYNRNGLLWDKSMHVDGIKTGHTSGAGYNLVTSATK 247

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVP 290
               L+AV++G      R   S  +L+ GF                 +  +  +  +   
Sbjct: 248 DGMRLVAVVMGTKSEAARKAESKKILNYGFRFFETITPYKAGDSFVTQKIWYGDKESVDL 307

Query: 291 NISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            ++ +  +   + +  N     +  K+  +     E +  +  ++  K
Sbjct: 308 GVTTDTPITINRGQAKNLKANFELTKELTAPLAKGETVGRIYFQLNGK 355


>gi|256821559|ref|YP_003145522.1| Serine-type D-Ala-D-Ala carboxypeptidase [Kangiella koreensis DSM
           16069]
 gi|256795098|gb|ACV25754.1| Serine-type D-Ala-D-Ala carboxypeptidase [Kangiella koreensis DSM
           16069]
          Length = 389

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 86/350 (24%), Positives = 150/350 (42%), Gaps = 17/350 (4%)

Query: 2   RQFLVIIAMAMLSNIFPF------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +   ++++   +                       Y L+D +TG +I EN  D    PAS
Sbjct: 6   KTLKILLSAGFILAFVANVANAAIQPGKPNVDARSYLLMDYDTGQIIMENNADQKLPPAS 65

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKL 110
           LTK+MT+Y++   L +    +   + +S+NA          S    +    + +++  + 
Sbjct: 66  LTKMMTSYIIGDELHKGNLSMDDKVLVSENAWAQNPKLKGGSLMFIEVNKYVRVEDLYRG 125

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +I++S ND ++A+AE +  TE  F   MN  +  LG+  THF N+ G    GH TTARD+
Sbjct: 126 IIIQSGNDASIAMAEHIAGTEGAFADLMNQYAAKLGMKDTHFENSTGWPAEGHVTTARDL 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIV 229
           AIL+  +  DFP+    +  +     G K  N N  +G   L  DG+KTG T  +G+ +V
Sbjct: 186 AILARALIRDFPEDYKLYAEREFTYNGIKQANRNGLLGDPTLNVDGLKTGHTEEAGYCLV 245

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
           +SA + D  LI+V++G      R   +  LL+ GF   T+ K             ++   
Sbjct: 246 SSAEKEDMRLISVVMGTDSEAERAAETRKLLNFGFRFYTNIKPFKAGQSLRTARVWKGAE 305

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 ++++   T  +      Q      +        +  ++     K
Sbjct: 306 EEVKVGLAQDAGLTLLKSQKDQIQANYT-IQSQLMAPIRRGQVVGEVFFK 354


>gi|153817207|ref|ZP_01969874.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae NCTC 8457]
 gi|227081121|ref|YP_002809672.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae M66-2]
 gi|229505452|ref|ZP_04394962.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae BX 330286]
 gi|298498936|ref|ZP_07008743.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MAK 757]
 gi|126512241|gb|EAZ74835.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae NCTC 8457]
 gi|227009009|gb|ACP05221.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae M66-2]
 gi|229357675|gb|EEO22592.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae BX 330286]
 gi|297543269|gb|EFH79319.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MAK 757]
          Length = 391

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETMAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDVVGTLYYQ 353


>gi|253997624|ref|YP_003049688.1| beta-lactamase [Methylotenera mobilis JLW8]
 gi|253984303|gb|ACT49161.1| Beta-lactamase [Methylotenera mobilis JLW8]
          Length = 392

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 91/331 (27%), Positives = 149/331 (45%), Gaps = 4/331 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            +      +       ++   +  +  Y L D N G+VIA+N       PASLTK+MTAY
Sbjct: 22  LVATSFTNLAHAGAAQIAPPPSLAVKAYLLKDFNNGYVIAQNNASMRVEPASLTKIMTAY 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  +K     L   + +S++A +   S    +     T+D  L  +I+ S ND ++ +
Sbjct: 82  LAFKAVKNGHLQLNQTLPVSEHAWKTEGSKMFIEPNKPATVDELLHGMIIVSGNDASITL 141

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E  F Q MN  ++ LG+  TH+MNA G+    HYTTA D+A L+  +  DFP+
Sbjct: 142 AEGIASSEPLFAQMMNKEAERLGMKNTHYMNATGLPDPQHYTTAEDLATLAMALIRDFPE 201

Query: 184 YMHY-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                + +K       K PN N  +      DGMKTG T ++G+ ++++A + +   I+V
Sbjct: 202 EYKRLYSVKEYAYNNIKQPNRNRLLWLDPNVDGMKTGHTESAGYCLISTAKRDNTRYISV 261

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           ILGA     R   S  LL+ GF         K+   + K    +   NE+ + +      
Sbjct: 262 ILGAPTDTARATESQKLLNYGFQFFDSALVYKQNKPVSKLKVWKGEVNEINSTTANDLYL 321

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 Y      A   +      +K  ++ 
Sbjct: 322 TLPKGEYANVKAIASSTQPLIAPIKKGQVIG 352


>gi|163801380|ref|ZP_02195279.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. AND4]
 gi|159174869|gb|EDP59669.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. AND4]
          Length = 388

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 13/347 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +R     + + + S+  P L+         +   Y L+D  +G +IAE        PASL
Sbjct: 4   LRTRFTFVCLLLASSCLPALAVVTPNPPQLQAKGYVLMDFQSGAIIAEQNARAGLAPASL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    +    +T+ N ++ +I+
Sbjct: 64  TKLMTAYVVGQEIKSGRLQWDDKVTVSENAWSAKFPDSSKMFIQPNDEITIANLMRGVII 123

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E  FV  MN  +  L L+ T+F+N+HG+   G  T+  DMA L
Sbjct: 124 QSGNDACVALAEHVAGSEGAFVSLMNGWADKLSLNDTYFVNSHGLDSEGIQTSPNDMATL 183

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASA 232
              I  D P+    +  K  +       N N       +  DG KTG+T  +G+++V+SA
Sbjct: 184 MQAIINDVPEVYALYSEKVFKWNKITQYNRNKLLWDKSMDVDGGKTGYTSNAGYSLVSSA 243

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNE 288
            QG   LI+V++G   + +R   S +LLS GF     ++             ++ ++S  
Sbjct: 244 KQGKMRLISVVMGTPSKQSRITQSKNLLSYGFRFYGTKQVAKQGEVQASAKVWKGDVSKI 303

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       K  ++   + K
Sbjct: 304 DLGFAQDAYLTLPRSLTAGLDKSAVVN-EPLIAPIAKGDVVGKVVWK 349


>gi|229522951|ref|ZP_04412365.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TM 11079-80]
 gi|229527763|ref|ZP_04417154.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 12129(1)]
 gi|229334125|gb|EEN99610.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 12129(1)]
 gi|229340168|gb|EEO05176.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TM 11079-80]
          Length = 389

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 93/345 (26%), Positives = 147/345 (42%), Gaps = 16/345 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSN 287
           A  G+  LI+V++G+    +R   S  LLS GF                    +  N + 
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGNKNE 304

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++ V  T               DK +      K  ++ + 
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDK-NLEAPIAKGDVVGSI 348


>gi|54309028|ref|YP_130048.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum SS9]
 gi|46913460|emb|CAG20246.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum SS9]
          Length = 404

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 11/342 (3%)

Query: 6   VIIAMAMLSNIFPF-LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
             +++++ +   P  +  A       Y L+D NTG V+ E   +   NPASLTKLMT+YV
Sbjct: 28  FFLSLSLPALAVPTVIPDAPVLGAKGYVLMDYNTGRVLVEKNANVKLNPASLTKLMTSYV 87

Query: 65  VFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
               +K         + IS+NA        S    + G+ +++ +  + LI++S ND +V
Sbjct: 88  AGQEMKRGNISQDDIVVISRNAWARNFSDSSKMFIEVGTEVSMMDLYRGLIIQSGNDASV 147

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AIAE +  ++  FV  MN+ +KNLG++ + F NAHG+     Y+T  D+A+L   +  D 
Sbjct: 148 AIAEHVAGSQDAFVGLMNSWAKNLGMNNSQFANAHGLDNPNLYSTPYDIALLGQALIKDL 207

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P     +  +          N N  +G      DGMKTG+T  +G+++ +SA QG+  LI
Sbjct: 208 PDLYPLYSERSFTYNNITQRNRNGLLGDKSINVDGMKTGYTSGAGYSLASSATQGNMRLI 267

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE- 295
           +V++G+    +R   S  LL+ GF   +         +      +  N       +  + 
Sbjct: 268 SVVMGSSSTKSREAESKQLLNYGFRFFSTISPHKKGQEVLNERIWMGNSDTISLGVESDT 327

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            V  ++ +       +K   D  +     + +  +  ++  K
Sbjct: 328 YVTLSRNDAKKVTANVKLTHDLMAPIAIGDNVGSIFYQVDGK 369


>gi|188534313|ref|YP_001908110.1| D-alanyl-D-alanine carboxypeptidase [Erwinia tasmaniensis Et1/99]
 gi|188029355|emb|CAO97232.1| D-alanyl-D-alanine carboxypeptidase [Erwinia tasmaniensis Et1/99]
          Length = 402

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ + +         +A       + L+D ++G V+AE+  D   +PASLTK+M++YV+ 
Sbjct: 20  LLLLTVSCAWAQDAPVAPQLDAKAWFLMDFHSGKVLAESNADLRLDPASLTKMMSSYVIG 79

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             LK  K      +T+  +A                K G  + +    K ++++S ND +
Sbjct: 80  QALKAGKIGKDDLVTVGNDAWATGNPVLKGSSLMFLKPGDRIAVSELNKGIVIQSGNDAS 139

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  FV  MNN  + LGL  THF   HG+   G ++TARDMA++   +  D
Sbjct: 140 IALADYVAGSQDAFVGLMNNYVQTLGLKNTHFKTVHGLDADGQFSTARDMALIGQALIRD 199

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P      + K       +  N N     + L  DG+KTG T  +G N+VASA++GD+ +
Sbjct: 200 VPDEYALHKEKEFTFNNIRQHNRNRLLWSSNLQVDGIKTGHTSGAGNNLVASAVEGDRRM 259

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           I+V+LGA     R + S  LL+ G  N      I        +  +  +       ++++
Sbjct: 260 ISVVLGAATDAVRFRESEKLLTWGLRNFETVTPIKAGKAFATQRVWYGDRKEVSLGVAQD 319

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T         +      +        K  ++   
Sbjct: 320 AAITLPHGQFKGLKASFTLSQPQLTAPLVKNQVVGTI 356


>gi|297579619|ref|ZP_06941546.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC385]
 gi|297535265|gb|EFH74099.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC385]
          Length = 389

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 147/345 (42%), Gaps = 16/345 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSN 287
           A  G+  LI+V++G+    +R   S  LLS GF                    +  + + 
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++ V  T               DK +      K  ++ + 
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDK-TLEAPIAKGDVVGSI 348


>gi|153829019|ref|ZP_01981686.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 623-39]
 gi|148875448|gb|EDL73583.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 623-39]
          Length = 389

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|71065253|ref|YP_263980.1| penicillin-binding protein 6 [Psychrobacter arcticus 273-4]
 gi|71038238|gb|AAZ18546.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Psychrobacter arcticus 273-4]
          Length = 388

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 159/343 (46%), Gaps = 9/343 (2%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           Q +V ++++M + +              Y L+D NTG ++A+   +    PASLTK+MT+
Sbjct: 12  QLVVGVSISMSAVMASAAIQQPEMANTAYVLMDYNTGEILAQKNANQALPPASLTKMMTS 71

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDI 119
           Y++   L       T  + +S NA     +           + ++ + L+ +I++S ND 
Sbjct: 72  YIIEQRLASGDLKETDQVLMSPNAWCRGSNSQSCMYVPVNKSASVIDMLRGIIIQSGNDA 131

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           + A+AE +  +E  F   MN  ++ +G+  THF+N+ G+ + GH  +A D+A LS  I  
Sbjct: 132 SKAMAEHIAGSEASFAILMNEQAQKIGMKNTHFVNSTGMPEEGHQASALDLAKLSRAIIK 191

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +   Y   +  K     G    N N  + T    DG+KTG T A+G+ + AS+ +    L
Sbjct: 192 NSGDYYRIYSEKEFTYNGITQGNRNALLATDPTVDGLKTGHTDAAGYCLAASSNREGMRL 251

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNIS 293
           I+VI+G   +  R   S  LL+ GF + T        + ++ +   F +      V   +
Sbjct: 252 ISVIMGTESQQARADQSRELLNWGFGHFTTVTQAPAGQFVSKVPVWFGEAKEIEVVTADN 311

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            ++ TT+ +    +T +   +  E+     ++I  +   I  K
Sbjct: 312 LQILTTKTQKNKISTVIDIPESLEAPIKKGQEIGKMMAVIDGK 354


>gi|15601038|ref|NP_232668.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O1 biovar
           eltor str. N16961]
 gi|121587136|ref|ZP_01676912.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 2740-80]
 gi|121728082|ref|ZP_01681119.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V52]
 gi|147671927|ref|YP_001215796.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O395]
 gi|153823905|ref|ZP_01976572.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|227811892|ref|YP_002811902.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae M66-2]
 gi|229506574|ref|ZP_04396083.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae BX 330286]
 gi|229510630|ref|ZP_04400110.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|229517239|ref|ZP_04406684.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC9]
 gi|229606053|ref|YP_002876757.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MJ-1236]
 gi|254850532|ref|ZP_05239882.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MO10]
 gi|298500115|ref|ZP_07009921.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MAK 757]
 gi|9657668|gb|AAF96181.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548672|gb|EAX58722.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae 2740-80]
 gi|121629630|gb|EAX62051.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V52]
 gi|126518573|gb|EAZ75796.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|146314310|gb|ABQ18850.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O395]
 gi|227011034|gb|ACP07245.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae M66-2]
 gi|227014938|gb|ACP11147.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O395]
 gi|229345275|gb|EEO10248.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC9]
 gi|229353075|gb|EEO18015.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|229356925|gb|EEO21843.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae BX 330286]
 gi|229372539|gb|ACQ62961.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MJ-1236]
 gi|254846237|gb|EET24651.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MO10]
 gi|297542096|gb|EFH78147.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MAK 757]
          Length = 389

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 93/344 (27%), Positives = 147/344 (42%), Gaps = 14/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNE 304

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           V   S +         +        +  ++      K  ++ + 
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSI 348


>gi|51892953|ref|YP_075644.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51856642|dbj|BAD40800.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 403

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 97/326 (29%), Positives = 149/326 (45%), Gaps = 17/326 (5%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                + P   L++  +G VI +       NPAS+TK+MT  V F  +++ K  L  P+T
Sbjct: 42  EPVKIESPSAILMEPLSGRVIYQKNAHERRNPASVTKIMTLIVAFDAIRDGKVSLKDPVT 101

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           IS+ A   P +      G T +L+  L  + V SAND AVA+AE +  +   FV  MN  
Sbjct: 102 ISEEAKRQPGTTIFADVGETFSLEELLLSVAVGSANDAAVAVAEHVAGSVDAFVALMNKK 161

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-- 199
           +K LG++ T FMN  G+   GHY+TA D+A++S      +P+ +    I G E+      
Sbjct: 162 AKELGMNDTQFMNPTGLSAEGHYSTAYDIALMSRHAVLHYPELVKLTAIYGAELNVPWRK 221

Query: 200 ------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N N  +  + GADG+KTG+T A+G+ + A+A+Q +  +IAV++GA     RN
Sbjct: 222 NGPKFQLWNNNKLLTWYPGADGLKTGWTQAAGYCLAATAVQNNTRMIAVVMGAESAKQRN 281

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE------VCTTQKEIINYN 307
              A LL  GF N T  +      K    +     V  I         V   +       
Sbjct: 282 IEVARLLDYGFANYTAVEIAPADKKFGPVRVARGAVAAIEPVPRAAFGVSVPKGSQDKVK 341

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKI 333
            +++  K         EK   +   +
Sbjct: 342 WEVRLPKQ---VAAPLEKGQAVGEIV 364


>gi|320158294|ref|YP_004190672.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus MO6-24/O]
 gi|319933606|gb|ADV88469.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus MO6-24/O]
          Length = 387

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 146/350 (41%), Gaps = 16/350 (4%)

Query: 1   MRQFLVIIAMAMLS-------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+  + + +    S            +          Y L+D ++G V+     D   NP
Sbjct: 1   MKSIVSLTSALCASVMALSAHAAPTVIPDPPALGAKGYVLMDYHSGEVLVAKNADTQLNP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKL 110
           ASLTKLMTAYV    +       +  + IS+NA        S    + G++++L++  + 
Sbjct: 61  ASLTKLMTAYVAGQEMNRGNIRFSDQVVISRNAWAKNFPDSSKMFIEVGTSVSLEDLYRG 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           LI++S ND +VAIAE +  ++  FV  MN+ +  LGL  + F N HG+   G Y+T RD+
Sbjct: 121 LIIQSGNDASVAIAEHVAGSQDAFVSLMNSWADKLGLQNSAFTNPHGLDSTGLYSTPRDI 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIV 229
           A L   I  D P     +        G    N N  +       DGMKTGFT  +G+++ 
Sbjct: 181 AKLGQAIIRDLPSVYPMYSETSFTYNGITQYNRNGLLRDRSIAVDGMKTGFTSGAGYSLA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
            SA  G+  LI+V++G+   ++R   S  LLS GF                    +    
Sbjct: 241 TSATSGNMRLISVVMGSNSTSSREAESKQLLSYGFRFFDTVSPTKANQPLADTRIWMGEK 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +     + E++  T  +      Q +             +  ++   I K
Sbjct: 301 NQLSVGLKEDIFLTLPKGDTKKLQAELI-YLPDLSAPILRDQVVGQVIYK 349


>gi|299769239|ref|YP_003731265.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter sp. DR1]
 gi|298699327|gb|ADI89892.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter sp. DR1]
          Length = 382

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 145/337 (43%), Gaps = 8/337 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGLPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSRYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEV 296
           +VI G    N R   + +LLS GF N                  +          ++E  
Sbjct: 247 SVIFGTDSVNERANQTRTLLSWGFANFETANIQPANQVLAKAKVWFGKEDEVQIGLAENF 306

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             T  +    N    +   + +     +K  ++   +
Sbjct: 307 SVTMPKG-KANGIKTQLVVQPNLNAPLQKGQVVGKLV 342


>gi|300716035|ref|YP_003740838.1| D-alanyl-D-alanine carboxypeptidase [Erwinia billingiae Eb661]
 gi|299061871|emb|CAX58987.1| D-alanyl-D-alanine carboxypeptidase [Erwinia billingiae Eb661]
          Length = 400

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 11/331 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S        A       + L+D N+G V+AE++ D   +PASLTK+M +YVV   +K  
Sbjct: 24  FSTRAEEAPAAPQIDAKAWILMDYNSGKVLAESHADDRLDPASLTKMMASYVVGQAIKAG 83

Query: 73  KAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           K      +T+ K+A                K G  + +    K +I++S ND ++A+A+ 
Sbjct: 84  KITNDDMVTVGKDAWATGNPILQGSSLMFLKPGDRIPVSELNKGIIIQSGNDASIALADY 143

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  ++  FV  MNN  + LGL  THF   HG+   G Y+TARDMA++   +  D PQ   
Sbjct: 144 VAGSQDSFVSLMNNYVQALGLKNTHFKTVHGLDSDGQYSTARDMALIGQALIRDVPQEYA 203

Query: 187 YFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             + K          N N     + L  DG+KTG T  +G N+VASA+ GDQ LI+V+LG
Sbjct: 204 LHKEKEFTFNRIHQQNRNRLLWSSNLQVDGIKTGHTAGAGNNLVASAVSGDQRLISVVLG 263

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQK 301
           +    TR + S  LL+ GF        I           +          ++ +   T  
Sbjct: 264 SPTDATRFRESEKLLTWGFRFYDTVTPIKADKPFSTQRVWYGEKKEVNLGVASDASVTVP 323

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    N +      +       +K  ++ N 
Sbjct: 324 KGQLKNLKASFTLSQPQLTAPLKKNQVVGNI 354


>gi|254284899|ref|ZP_04959865.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae AM-19226]
 gi|150424902|gb|EDN16679.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae AM-19226]
          Length = 389

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   +  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAMIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|149925918|ref|ZP_01914181.1| Serine-type D-Ala-D-Ala carboxypeptidase [Limnobacter sp. MED105]
 gi|149825206|gb|EDM84417.1| Serine-type D-Ala-D-Ala carboxypeptidase [Limnobacter sp. MED105]
          Length = 397

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 96/330 (29%), Positives = 151/330 (45%), Gaps = 11/330 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            +     +          Y LLD  TG  +AE       +PASLTKLMTAY+ F+ L+ K
Sbjct: 30  AAAQSSVMPPPPEIGAKGYMLLDLTTGQTLAEFNSRERLDPASLTKLMTAYMAFAALESK 89

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  +   + +S  A +   S    +    +T++  L  +IV+S ND + AIAE L   E 
Sbjct: 90  QIRMDQQVPVSPYAWKAEGSRMFIEPNKPVTVEELLYGVIVQSGNDASRAIAELLAGDEN 149

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQIK 191
            F   MN  +K LGL+ T+F N+ G+    HYTTARD+ IL+ RI TDFP+Y    +  K
Sbjct: 150 NFATLMNQQAKRLGLTDTNFKNSTGLPDPQHYTTARDLGILAKRIITDFPEYYKKMYSTK 209

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----DQSLIAVILGA 246
                G + PN N  +      DGMKTG T ++G+ +V+SA +      D+ L++V+LG 
Sbjct: 210 EYTYNGIRQPNRNRLLWIDPSVDGMKTGHTESAGYCLVSSANRTLPNGVDRRLLSVVLGT 269

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKE 302
                R + S  L++ G+      K  +        + Y+         +++++      
Sbjct: 270 TSDQARTQESLKLMNYGYQMFETVKLYSAKQAISTSEVYKGQAKEVKLGVNKDLLINVPR 329

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +    +    K K +        T L   
Sbjct: 330 GMAKQLKATVEK-KGTLIAPIPAGTELGKL 358


>gi|327485477|gb|AEA79883.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae LMA3894-4]
          Length = 389

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDKVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|254225957|ref|ZP_04919558.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V51]
 gi|125621491|gb|EAZ49824.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae V51]
          Length = 389

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    L          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVLPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|209521266|ref|ZP_03269986.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. H160]
 gi|209498308|gb|EDZ98443.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. H160]
          Length = 409

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 86/340 (25%), Positives = 154/340 (45%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++   ++++               + L+D  +  V+A    D    PASLTKLMTAY+V
Sbjct: 30  LVLPATLVASSAFAQVPPPGVNARSWVLVDATSNQVLASANADERVEPASLTKLMTAYLV 89

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L  KK  +   I  S+         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 90  FEALDTKKITMDQSIEPSEAVRRVRNDESRMFIEALKPVTVHDLVYGMIVQSGNDAAIAL 149

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+AILS R+  D+P 
Sbjct: 150 AELVGGSEAQFVDMMNKEAQRLGMKHTHFADVNGMPDPQHYTTAGDLAILSARLIRDYPD 209

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 210 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRPMPGATDAS 269

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+    +    +
Sbjct: 270 RRLVSVMMGETKEHDRVQDSLKMLNYGYTAYDTTRLYKANQVVATPRVYKGAQDSVQVGV 329

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q++      +   + +++   K
Sbjct: 330 KGDQYITLPKGAGDKAKPQIELNDPLVAPIANGQQVGTAK 369


>gi|187922505|ref|YP_001894147.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia phytofirmans
           PsJN]
 gi|187713699|gb|ACD14923.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia phytofirmans
           PsJN]
          Length = 409

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   ++++               + L+D  +  V+A   PD    PASLTKLMTAY+V
Sbjct: 30  VVLPATLVASTAFAQVPPPAVNARSWVLVDATSNQVLASGNPDERVEPASLTKLMTAYLV 89

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L+ KK  +   +  S+         S    +    +T+ + +  +I++S ND A+A+
Sbjct: 90  FEALQTKKINMDQTVMPSEAVRRVRTDESRMFIEANKPVTVHDLVYGMIIQSGNDAAIAL 149

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MNN ++ LG+  THF + +G+    HYTTA D+A+LS R+  DFP 
Sbjct: 150 AELVGGSESQFVNMMNNEAQKLGMKNTHFADVNGMPDPQHYTTAGDLAVLSARLIRDFPD 209

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 210 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGATDAS 269

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+         +
Sbjct: 270 RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVRLYKANQVVGTPRVYKGAQDTVQIGV 329

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q+++     +   + +++   K
Sbjct: 330 KSDQYITVPKGMGDKVKPQIEQIDPLIAPIANGQQVGTAK 369


>gi|229514750|ref|ZP_04404211.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TMA 21]
 gi|229348730|gb|EEO13688.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TMA 21]
          Length = 389

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|167759038|ref|ZP_02431165.1| hypothetical protein CLOSCI_01385 [Clostridium scindens ATCC 35704]
 gi|167663445|gb|EDS07575.1| hypothetical protein CLOSCI_01385 [Clostridium scindens ATCC 35704]
          Length = 435

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 142/321 (44%), Gaps = 11/321 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                  P   L++ +TG +I E   D    PAS+TK+MT  ++F  L   K  L   ++
Sbjct: 76  AGPQVGAPSAILMEASTGQIIYEKDADEQRPPASVTKIMTLLLIFDALDSGKISLKDEVS 135

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S+ A+    S    + G T T+D  +K + V SAND  VA+AE +C  E++FV+ MN  
Sbjct: 136 TSEYAASMGGSQVFLEPGETQTVDTMIKCIAVASANDACVAMAEYICGNEEEFVKQMNQR 195

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-- 199
           +K LG+  THF+N +G+   GH TTARD+A++S  + T +PQ   Y  I    I      
Sbjct: 196 AKGLGMENTHFVNCNGLDTDGHLTTARDIALMSRELITTYPQIHDYSMIWMENITHTTKK 255

Query: 200 ------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   NTN  V  +  A G+KTG T  + + + A+A +    LIAVI+ A D   R 
Sbjct: 256 GTTEFGLTNTNKLVRQYEYATGLKTGSTDKAKYCVSATAKKDGMELIAVIMAAPDHKQRF 315

Query: 254 KVSASLLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             + +LL+ GF       + K  +       +                      +  T  
Sbjct: 316 TDATTLLNYGFGKCNKYEEEKAKSIQPAKVSRGVAETVKVRQKTPFAYVDITGADLKTIE 375

Query: 311 KEAKDKESHFIDFEKITLLKN 331
           ++    +      +K   +  
Sbjct: 376 RKEALNKKIKAPVKKGDKVGK 396


>gi|153803461|ref|ZP_01958047.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MZO-3]
 gi|124121011|gb|EAY39754.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae MZO-3]
          Length = 389

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDKVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLXSS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|126175479|ref|YP_001051628.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS155]
 gi|125998684|gb|ABN62759.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella baltica OS155]
          Length = 391

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 12/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I + ++       +    A +     + L+D N+G +IAE+      NPASLTK
Sbjct: 9   IKTLLLISSASLPVYAAQPIITPDAPSVAAKAFVLMDYNSGQIIAESNAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K     +   +TISKNA        S    + G+T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSVDDDVTISKNAWSKNFSDSSKMFIEVGTTVKVGDLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F NAHG+    H +TA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENAHGLDAENHKSTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P   H +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDEPDEYHIYSEKFYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G    + R   S  LL+ GF                 QQ    +   +  
Sbjct: 249 DGMRLISVVMGTQSESARKAESKKLLTYGFRFFETVTPYKAGDSFITQQIWYGDKSTVDL 308

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                  +  ++    +     +  K  ++     E +  L
Sbjct: 309 GVATDTPITISRGRGKDLKANFELTKPLDAPLKKGETVGRL 349


>gi|120597860|ref|YP_962434.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella sp. W3-18-1]
 gi|146293967|ref|YP_001184391.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella putrefaciens
           CN-32]
 gi|120557953|gb|ABM23880.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella sp. W3-18-1]
 gi|145565657|gb|ABP76592.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella putrefaciens
           CN-32]
          Length = 391

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 11/342 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I ++++       +    A T     Y L+D  +G +IAE+      NPASLTK
Sbjct: 9   IKTLLLISSVSLPVYAAQPIVTPDAPTVAAKAYVLMDYYSGQIIAESNAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISKNA        S    + G T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSPEDDVTISKNAWSKNFSDSSKMFIEVGKTVKVADLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ SK LG+  ++F N+HG+    H TTA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWSKQLGMRDSYFENSHGLDSDNHKTTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDVPEEYRVYSEKFYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVP 290
               LI+V++G      R   S  LL+ GF                 +  +  + S    
Sbjct: 249 DGMRLISVVMGTQSEAARKAESKKLLTYGFRFFETITPYKAGDNFTTQQIWYGDKSTVDL 308

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            ++ +   T       + +      K+      +K   +   
Sbjct: 309 GVATDTPITVSRGRAKDLKANFELTKQ-LDAPLKKGETVGRL 349


>gi|83858300|ref|ZP_00951822.1| penicillin binding protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853123|gb|EAP90975.1| penicillin binding protein [Oceanicaulis alexandrii HTCC2633]
          Length = 399

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/342 (25%), Positives = 145/342 (42%), Gaps = 11/342 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR+ L ++A+  +S     ++  A   +  +  +LD  +G V+     + P  PAS++KL
Sbjct: 19  MRRLLCLLALITVSLSPSAMAQSAFDTRASHAVILDYESGDVLFSKNGEEPMPPASMSKL 78

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVK 114
           MTA +VF  L++ +  L T + +S+NA          S       S   + + ++ +IV+
Sbjct: 79  MTALMVFEALEDGRFTLDTSLPVSENAWRRGGAASGSSTMFLDVNSRAEVGDLIRGIIVQ 138

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  + +AE+L  TE+ F Q M   +  LGL +  F NA G     H  +A D+A L+
Sbjct: 139 SGNDACIVVAEALGGTEENFAQMMTERAHELGLESASFANATGWPDPDHRISALDLARLA 198

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I   +PQY   +        G +  N N  +G F GADG+KTG T  SG+ +VASA +
Sbjct: 199 RHIIETYPQYYDIYSETEFTYNGIRQYNRNPLLGVFDGADGLKTGHTEESGYGLVASAER 258

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVP 290
             +  I V  G      R   S  L+   F   +    +         + Y         
Sbjct: 259 DGERRIVVFNGMDSNRARADESERLMRAAFSEFSTVDLVEAGEVLGDAEVYLGVAPRVEL 318

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +E +          +    E   +       ++  ++   
Sbjct: 319 RAAENLSFGLHRRDR-DGVTAELVYQAPLHAPVQEGDIVGQL 359


>gi|255655303|ref|ZP_05400712.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile QCD-23m63]
 gi|296451287|ref|ZP_06893027.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium difficile
           NAP08]
 gi|296880361|ref|ZP_06904324.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium difficile
           NAP07]
 gi|296259893|gb|EFH06748.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium difficile
           NAP08]
 gi|296428602|gb|EFH14486.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium difficile
           NAP07]
          Length = 387

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 91/350 (26%), Positives = 153/350 (43%), Gaps = 18/350 (5%)

Query: 1   MRQFL-VIIAMAMLSNIFPFL---------SIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++     +A+ +      F          +           L+D  +G ++ E      
Sbjct: 1   MKKLASTALAILLAFTPLSFSFANNKENADANQLNISSKSAILMDVGSGQILYEKDAHKK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS+TK+MT  ++   L      L   + +S+ AS    S    + G T  +D  LK 
Sbjct: 61  LPPASVTKVMTMLLIVEALDSGDIKLDDEVQVSETASSMGGSQIFLEPGETQKVDTLLKG 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + V SAND  VA+AE L  + + FV  MN  +K L ++ THF N +G+    HYT+A D+
Sbjct: 121 IAVASANDACVAMAEHLAGSVEGFVDRMNAKAKELNMNDTHFANTNGLPVANHYTSAHDI 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASG 225
           A++S  +        +        + GKK       NTN  +  + GA G+KTGFT  + 
Sbjct: 181 ALMSRELLKHEMISKYLTTWMDKVVVGKKQVTVGLANTNKLIKHYQGATGVKTGFTQEAK 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--- 282
           + + ASA +G+  L+A  LGA     R   ++SLL+ GF N    K  +           
Sbjct: 241 YCLSASAKRGNTHLVAATLGAETSPERFNDASSLLNYGFANYESVKLCSKGDNIATLTLD 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +   N+V  +++E      +  +     K+ +  ++  +  +K T+L   
Sbjct: 301 KADENKVKLVAKEDLNALIKKGSSKEFEKKIEIVKNPKMPIKKGTVLGKI 350


>gi|91781628|ref|YP_556834.1| penicillin-binding protein 6 [Burkholderia xenovorans LB400]
 gi|91685582|gb|ABE28782.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Burkholderia xenovorans LB400]
          Length = 418

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   + ++               + L+D  +  V+A    D    PASLTKLMTAY+V
Sbjct: 39  VVLPATLAASTAFAQVPPPAVNARSWVLVDATSNQVLASGNADERVEPASLTKLMTAYLV 98

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L+ KK  +   +  S+         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 99  FEALQTKKINMDQTVMPSEAVRRVRTDESRMFIEANKPVTVHDLVYGMIVQSGNDAAIAL 158

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+AILS R+  DFP 
Sbjct: 159 AELVGGSESQFVNMMNTEAQRLGMKHTHFADVNGMPDPQHYTTAGDLAILSARLIRDFPD 218

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 219 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGTTDAS 278

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+         +
Sbjct: 279 RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVRLYKANQVVGTPRVYKGAQDTVQIGV 338

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q+++     +   + +++  +K
Sbjct: 339 KSDQYITVPKGMGDKVKPQIEQIDPLIAPLANGQQVGTVK 378


>gi|153001830|ref|YP_001367511.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS185]
 gi|160876563|ref|YP_001555879.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS195]
 gi|151366448|gb|ABS09448.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS185]
 gi|160862085|gb|ABX50619.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS195]
          Length = 391

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 12/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I + ++       +    A +     + L+D N+G +IAE+      NPASLTK
Sbjct: 9   IKTLLLISSASLPVYAAQPIITPDAPSVAAKAFVLMDYNSGQIIAESNAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K     +   +TISKNA        S    + G+T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSVDDDVTISKNAWSKNFSDSSKMFIEVGTTVKVGDLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F NAHG+    H +TA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENAHGLDAENHKSTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P   H +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDVPDEYHIYSEKFYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G    + R   S  LL+ GF                 QQ    +   +  
Sbjct: 249 DGMRLISVVMGTQSESARKAESKKLLTYGFRFFETVTPYKAGDSFITQQIWYGDKSTVDL 308

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                  +  ++    +     +  K  ++     E +  L
Sbjct: 309 GVATDTPITISRGRGKDLKANFELTKPLDAPLKKGETVGRL 349


>gi|302392458|ref|YP_003828278.1| serine-type D-Ala-D-Ala carboxypeptidase [Acetohalobium arabaticum
           DSM 5501]
 gi|302204535|gb|ADL13213.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetohalobium arabaticum
           DSM 5501]
          Length = 397

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 152/343 (44%), Gaps = 14/343 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL+ ++ ++  +           +     L++  +G VI E        PAS+TK MT  
Sbjct: 13  FLLCLSFSLTLSAEELPDPEFDLEAKSAVLMEAKSGKVIYEKNAHEELPPASITKTMTLL 72

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    + E KA L   +T S+ A+    S    + G  M L+  +K + + SAND  VA+
Sbjct: 73  LTMEAIDEGKANLDEAVTTSEYAAGMGGSQIWLEPGEEMKLEEMIKAIAIVSANDACVAV 132

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-----QHGHYTTARDMAILSWRIK 178
           AE L  TE+ FV  MN  +  LGL  THF+N +G+      + G+YT+A D+ ++S  + 
Sbjct: 133 AEHLYGTEEVFVNAMNEKADELGLDDTHFVNTNGLPVEDSDKRGNYTSAHDVGVMSRELV 192

Query: 179 TDFPQ--YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           T +PQ        I  L        NTN  V  + GADG+KTG T  +GF +VA+A +  
Sbjct: 193 TKYPQVLDYTKIWIDHLRDGDSFLRNTNNLVRFYKGADGLKTGHTSQAGFGVVATAERKG 252

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI-----IKDFYQQNLSNEVPN 291
              IAV++     +TR K +  LLS GF        I          + Y+         
Sbjct: 253 LRFIAVVMKEETSDTRFKEAGELLSYGFSIYRSVPVIQKGEVAIDEVEIYKGKNPKVKAV 312

Query: 292 ISEEVCTTQKEII--NYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +++     +    N   Q+   +D  +     EKI  L+  
Sbjct: 313 ARKDLTAAVIKGNEGNLKRQILVKEDLTAPLKRGEKIGELRVL 355


>gi|307728308|ref|YP_003905532.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp.
           CCGE1003]
 gi|307582843|gb|ADN56241.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp.
           CCGE1003]
          Length = 409

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   ++S+               + L+D  +  V+A   PD    PASLTKLMTAY+V
Sbjct: 30  VVLPATLVSSAAFAQVPPPAVNARSWVLVDATSNQVLASGNPDERVEPASLTKLMTAYLV 89

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L+ KK  +   +T  +         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 90  FEALQTKKITMDQTVTPGEAVRRVRTDESRMFIEANKPVTVHDLVYGMIVQSGNDAAIAL 149

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG++ THF + +G+    HYTTA D+A+LS R+  DFP 
Sbjct: 150 AELVGGSEAQFVNMMNTEAQRLGMTHTHFADVNGMPDPQHYTTAGDLAVLSARLIRDFPD 209

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 210 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGTPDAS 269

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+ +       +
Sbjct: 270 RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVRLYKASQVVGTPRVYKGSQDTVQIGV 329

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q+++     +   + +++   K
Sbjct: 330 KSDQYITVPKGMADKVKPQIEQIDPLIAPIANGQQVGTAK 369


>gi|262040030|ref|ZP_06013292.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259042607|gb|EEW43616.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 389

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 145/346 (41%), Gaps = 19/346 (5%)

Query: 6   VIIAMAMLSNI--------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           + IA+++L++          P      + +   + L+D  TG V+         NPASLT
Sbjct: 7   LFIAVSLLASSVSCAFAVDLPATVAPPSIQAGSWVLMDYTTGQVLTAGNEHQQRNPASLT 66

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   +   +      +T+ K+A                K G  +++ +  + L
Sbjct: 67  KLMTGYVVDRAIDSHRITFDDIVTMGKDAWAKGNPVFDGSSLMFLKPGDRVSVRDLSRGL 126

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV S ND  VA+A+ +   + +FV  MN   + L L  THF   HG+   G +++A D+A
Sbjct: 127 IVDSGNDACVALADYVAGGQPQFVALMNQYVEKLHLRDTHFETVHGLDAPGQHSSAYDLA 186

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  I    P   H +  K L   G    N N       +  DG+KTG T  +GFN++A
Sbjct: 187 VLSRAIIHGEPDVYHMYSQKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIA 246

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLS 286
           SA+ G + LIAV++GA     R + +A LL  G  N    + +    K      +  +  
Sbjct: 247 SAVDGQRRLIAVVMGADSPKGREQQAAKLLHWGQQNFDTVQVLQKGQKVGTERIWYGDKE 306

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                  ++      +      + K   DK+           +   
Sbjct: 307 QIKLGTDQDFWLALPKAEVSRIKAKYVLDKKDLEAPIAANQRVGEI 352


>gi|217972275|ref|YP_002357026.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS223]
 gi|217497410|gb|ACK45603.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella baltica OS223]
          Length = 391

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 12/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I + ++       +    A +     + L+D N+G +IAE+      NPASLTK
Sbjct: 9   IKTLLLISSASLPVYAAQPIITPDAPSVAAKAFVLMDYNSGQIIAESNAYESLNPASLTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K     +   +TISKNA        S    + G+T+ + +  + +I++S
Sbjct: 69  MMTSYVIGQEIKAGNVSVDDDVTISKNAWSKNFSDSSKMFIEVGTTVKVGDLNRGIIIQS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F NAHG+    H +TA DMA+L  
Sbjct: 129 GNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENAHGLDAENHKSTAYDMALLGA 188

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQ 234
            +  D P   H +  K     G K  N N  +       DG+KTG T  +G+N+VASA +
Sbjct: 189 ALIRDVPDEYHIYSEKFYTFNGIKQYNRNGLLWDNSMDVDGIKTGHTSGAGYNLVASATK 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G    + R   S  LL+ GF                 QQ    +   +  
Sbjct: 249 DGMRLISVVMGTQSESARKAESKKLLTYGFRFFETVTPYKAGDSFITQQIWYGDKSTVDL 308

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                  +  ++    +     +  K  ++     E +  L
Sbjct: 309 GVATDTPITISRGRGKDLKANFELTKPLDAPLKKGETVGRL 349


>gi|323940908|gb|EGB37096.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E482]
          Length = 388

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF       +   + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIQAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAERLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISSHQRVGEI 351


>gi|85058899|ref|YP_454601.1| D-alanyl-D-alanine carboxypeptidase [Sodalis glossinidius str.
           'morsitans']
 gi|84779419|dbj|BAE74196.1| D-alanyl-D-alanine carboxypeptidase [Sodalis glossinidius str.
           'morsitans']
          Length = 396

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 92/325 (28%), Positives = 146/325 (44%), Gaps = 11/325 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       Y L+D  +G V+AE   D   +PASLTK+M++YV+   +K  K   T 
Sbjct: 30  APPAAPEINARAYILMDYQSGKVLAEANADQRLDPASLTKIMSSYVIGQAMKAGKIHPTD 89

Query: 79  PITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +TI K+A                K G  +T+D+  K ++++S ND ++A+A+ +  ++ 
Sbjct: 90  KVTIGKDAWATGNPVLRGSSLMFLKPGEQVTVDDLNKGIVIQSGNDASIALADHVAGSQD 149

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  +N  ++ LGL  THF+  HG+   G Y+TARDMAILS  +  + P      + K 
Sbjct: 150 AFVSLINQYAQALGLKNTHFLTVHGLDAEGQYSTARDMAILSQALIRNVPDEYALHKEKE 209

Query: 193 LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 K PN N       L  DG+KTG+T  +G N+VASA      LI+V+LGA     
Sbjct: 210 FTYNKIKQPNRNRLLWSGNLTVDGVKTGYTSGAGHNLVASATDNGMRLISVVLGAPTDGI 269

Query: 252 RNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + S  LL+ GF        +        +  +  + S     ++++   T  +    N
Sbjct: 270 RFRESEKLLTWGFRFYETVMPVPKDRPFTQQRVWFGDRSQVNLGVAQDAAITLSKGQLKN 329

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +               K  ++   
Sbjct: 330 MKASFTLSSPHLEAPLAKDQVVGTI 354


>gi|195941235|ref|ZP_03086617.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           O157:H7 str. EC4024]
          Length = 363

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 91/319 (28%), Positives = 142/319 (44%), Gaps = 11/319 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + L+D  +G V+AE   D   +PASLTK+MT+YVV   LK  K  L   +T+ K
Sbjct: 1   PVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLDDMVTVGK 60

Query: 85  NASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +A                K G  +++ +  K +I++S ND  +A+A+ +  ++  F+  M
Sbjct: 61  DAWATGNPALRGSSVMFLKPGDQVSVSDLNKGVIIQSGNDACIALADYVAGSQDSFIGLM 120

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LGL+ T F   HG+   G ++TARDMA+L   +  D P      + K       
Sbjct: 121 NGYAQKLGLTNTTFKTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNI 180

Query: 199 KYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           + PN N     + +  DGMKTG T  +G+N+VASA QGD  LI+V+LG      R   S 
Sbjct: 181 RQPNRNRLLWSSNVNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGTKTDRIRFNESE 240

Query: 258 SLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            LL+ GF        I      + +  +  + S       E    T       N +    
Sbjct: 241 KLLTWGFRFFETVTPIKPDATFVSQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYT 300

Query: 314 KDKESHFIDFEKITLLKNK 332
             +       +K  ++   
Sbjct: 301 LTEPQLTAPLKKGQVVGTI 319


>gi|163852334|ref|YP_001640377.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           extorquens PA1]
 gi|163663939|gb|ABY31306.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           extorquens PA1]
          Length = 418

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   ++   +  P  +        +  L+D ++G V+ E   D P++PAS+ KLMTA +
Sbjct: 16  MLAAIVSAFLHPAPARAQTFQTAAAHAILIDADSGSVLFEKAADEPFSPASMAKLMTAEI 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  +KE +  + T  T++++A     +     +   +  S + L + L+ LIV+S ND 
Sbjct: 76  VFRAIKEGRLSMDTEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ IAE++  TE  F   MN  +K +GL+ + F NA G        TARDMA ++  +  
Sbjct: 136 AITIAENMAGTEDAFAGMMNQRAKEIGLTRSTFRNATGYSAPDQKVTARDMARIAQHLID 195

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            +P++   +  +       K  N N  +   +GADG+KTG+   SG+ +  SA+Q  Q L
Sbjct: 196 TYPEFYKIYSEREFTWNKIKQQNRNPLLTLDIGADGLKTGYLEESGYALTGSAVQNGQRL 255

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEE- 295
           I V+ G      R   +  ++  GF     R+       + +          VP ++ + 
Sbjct: 256 IMVVSGLKTARDRAAEARKMMEWGFRAFEPRQVFAANETVAEVSVFGGEKGSVPVVANKP 315

Query: 296 --VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +   +        ++       +      ++  L+
Sbjct: 316 VRLLLPRGTSDRVTAKVVYQGPLVAPVAQGREVGRLR 352


>gi|15640963|ref|NP_230594.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|9655406|gb|AAF94109.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
          Length = 391

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 156/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +    P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRXVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDIVGTLYYQ 353


>gi|85706300|ref|ZP_01037394.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius sp. 217]
 gi|85669073|gb|EAQ23940.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius sp. 217]
          Length = 387

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 86/335 (25%), Positives = 145/335 (43%), Gaps = 10/335 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           IA A+L         A         ++D  TG V+ +   D    PAS++KLMT YV F 
Sbjct: 7   IAAALLCLGVALPVQAFETSAKAAFVMDVTTGTVLLDKNADTALPPASMSKLMTLYVAFE 66

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            ++  +  L   + +S++A  Y  S         + +++ L+ +IV S ND    IAE+L
Sbjct: 67  AVRSGRLTLDERLPVSEHAMSYGGSTMFLDTTDRVRVEDLLRGIIVLSGNDACAVIAEAL 126

Query: 128 CKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
                E  F + M   ++ +G++ + F NA G    GH  + RD+A+L+  I  DFP + 
Sbjct: 127 SPDGTEAGFARFMTQRAQQMGMTNSMFRNASGWPAEGHVMSVRDLALLARHIIEDFPDFY 186

Query: 186 HYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             F                N N  +G  +GADG+KTG T  +GF +  SAIQGD+ +I V
Sbjct: 187 KMFAETEFRFDGRAPSNINNRNPLLGLGIGADGLKTGHTEQAGFGLTGSAIQGDRRVIFV 246

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCT 298
           I G      R + S ++++  F     +  +    +    D +    ++    ++E+V T
Sbjct: 247 ISGLATTQDRARESEAIVNWAFRQFAQKSVLTAGDEVARADVWMGETTSVGLTVAEDVST 306

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
               +     + +             K  +L   +
Sbjct: 307 LLPVLDGGELKGEVV-YTGPVRAPVAKGDVLAELV 340


>gi|299132249|ref|ZP_07025444.1| Serine-type D-Ala-D-Ala carboxypeptidase [Afipia sp. 1NLS2]
 gi|298592386|gb|EFI52586.1| Serine-type D-Ala-D-Ala carboxypeptidase [Afipia sp. 1NLS2]
          Length = 475

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 110/313 (35%), Positives = 173/313 (55%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +  ++  F   + A       Y L+D N+G V+       PW PASLTK+MTAYV  + +
Sbjct: 3   LIAIAAAFSLHASATPAHAEAYLLIDANSGKVLQAENATQPWYPASLTKIMTAYVTLTAV 62

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K+ +  L T +T+S NA    PS   F  G+T+T+DNALK+++VKSAND+AV +AE +  
Sbjct: 63  KQGRISLDTLLTVSPNAVAQAPSKMGFPAGTTVTVDNALKMMMVKSANDMAVVLAEGVGG 122

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           + + F   MN T++ LG++ +HF+N +G+    H ++ARD+ IL+     D P+Y ++  
Sbjct: 123 SIEGFAGMMNETARQLGMTQSHFVNPNGLPDDAHISSARDIGILARAFYRDLPEYEYFAH 182

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           + G++   +   N N  +G + GADGMKTGF CASGFN+VASA + D+ LIAV+LGA   
Sbjct: 183 LPGIKFGRRVTMNFNKLIGRYPGADGMKTGFICASGFNLVASATRNDKHLIAVVLGAPSS 242

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             R   +A LL  GF +         +        +    PN+ ++VC   ++      +
Sbjct: 243 AQRTIKAAQLLEKGFNHSKLAWLKPSLGTVEQLPPIDAAPPNLRDQVCGPHRKRPAAEDE 302

Query: 310 MKEAKDKESHFID 322
             + +    +  D
Sbjct: 303 DDDVEITLDNKSD 315


>gi|167856207|ref|ZP_02478943.1| D-alanyl-D-alanine carboxypeptidase fraction A [Haemophilus
           parasuis 29755]
 gi|167852662|gb|EDS23940.1| D-alanyl-D-alanine carboxypeptidase fraction A [Haemophilus
           parasuis 29755]
          Length = 393

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 95/322 (29%), Positives = 145/322 (45%), Gaps = 8/322 (2%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            A       Y L+D N+G V+A   PD    PASLTK+MT+YVV   LK  K   +  +T
Sbjct: 33  AAPQLNAQTYILMDYNSGAVLASLNPDQHQAPASLTKMMTSYVVGEALKTGKIKNSDLVT 92

Query: 82  ISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +++N+        S         +++++  K +IV S ND  VAIAE +  +E+ F+  M
Sbjct: 93  VTENSWGQKFPGSSKMFLNVNQQVSVEDLNKGIIVVSGNDACVAIAEHISGSEQTFIDSM 152

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   +  GL  THF   HG+     Y++ARDMAI+   I  D P+    +  K       
Sbjct: 153 NKFVQKFGLKNTHFATVHGLDHPEQYSSARDMAIIGAHIIRDLPEEYKIYSEKEFTYNKI 212

Query: 199 KYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
             PN N       +  DGMKTG T  +G+N+VASA   +  LI+V++G      R   S 
Sbjct: 213 TQPNRNGLLWDKSINVDGMKTGHTDQAGYNLVASAYNSNTRLISVVMGVPTYKGREVESK 272

Query: 258 SLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            LL  GF N    K ++       +  Y  +LS       ++   T  +      + +  
Sbjct: 273 KLLQWGFANFETVKPLSAGQSVLEQAVYYGDLSKAQLGTLQDSYITVPKGKTAELKARYT 332

Query: 314 KDKESHFIDFEKITLLKNKITK 335
            +K +      K  ++   I +
Sbjct: 333 LEKTNLEAPLVKGQVVGKVIYQ 354


>gi|260774871|ref|ZP_05883772.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609126|gb|EEX35284.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 392

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 95/355 (26%), Positives = 152/355 (42%), Gaps = 21/355 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFL------------SIAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++  +I ++   S                    A       Y L+D N+G ++AE   +
Sbjct: 1   MKKTTLIKSVFASSIALSATFASSSFATPIVVPDAPQIAAKGYVLMDYNSGKILAEKEMN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLD 105
              +PASLTK+MT+YV+   L+     L   +TISKNA        S    + G+T+ ++
Sbjct: 61  TKLSPASLTKMMTSYVIGQELERGNISLQDDVTISKNAWAKNFPDSSKMFIEVGTTVKVE 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + +IV+S ND  VA+AE +  +E  FV  MN  +  LG+  THF N HG+     Y+
Sbjct: 121 ELNRGIIVQSGNDACVAMAEHIAGSEDAFVDLMNAWADTLGMKDTHFANVHGLDNPNLYS 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           T  DMA+L   +  D P     +  K     G    N N       +  DG+KTG T  +
Sbjct: 181 TPYDMALLGQALIRDVPDEYRIYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDF 280
           G+++V+SA +G   L+AV++G  + N R   S  LLS GF                 +  
Sbjct: 241 GYSLVSSATEGKMRLVAVVMGTKNANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKI 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  +       + ++   T       N Q     +KE      +K  ++     +
Sbjct: 301 WMGDKDTVALGLDQDTYVTLPRGQAKNLQASFVLEKE-LEAPIKKGDVVGKLYYQ 354


>gi|153820129|ref|ZP_01972796.1| penicillin-binding protein 6 [Vibrio cholerae NCTC 8457]
 gi|255745929|ref|ZP_05419876.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholera CIRS 101]
 gi|262163513|ref|ZP_06031259.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae INDRE 91/1]
 gi|262168229|ref|ZP_06035927.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC27]
 gi|126509329|gb|EAZ71923.1| penicillin-binding protein 6 [Vibrio cholerae NCTC 8457]
 gi|255735683|gb|EET91081.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholera CIRS 101]
 gi|262023472|gb|EEY42175.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC27]
 gi|262028080|gb|EEY46739.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae INDRE 91/1]
          Length = 378

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 88/334 (26%), Positives = 141/334 (42%), Gaps = 7/334 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +     +  +    +          Y L+D +TG V+ E+      NPASLTKLMT+YV 
Sbjct: 4   MAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVA 63

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K         + IS NA        S    + G+ + L +  + LIV+S ND +VA
Sbjct: 64  GQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVA 123

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           IAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+L   I  D P
Sbjct: 124 IAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLP 183

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +    +        G    N N       +  DGMKTG+T  +G+++ +SA  G+  LI+
Sbjct: 184 EIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLIS 243

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCT 298
           V++G+    +R   S  LLS GF              I          NEV   S +   
Sbjct: 244 VVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNEVALGSADTVY 303

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 +        +  ++      K  ++ + 
Sbjct: 304 LTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSI 337


>gi|218289604|ref|ZP_03493824.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240254|gb|EED07437.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 414

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 76/328 (23%), Positives = 139/328 (42%), Gaps = 6/328 (1%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P  S+    +     L+D  TG V+           AS+TK+MT  ++F  +   K
Sbjct: 47  TQPAPASSVDLAKQARSAVLMDFATGKVLYAKNAHERLPMASITKIMTLLLIFEAIDSGK 106

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
              T  +  S+ A+    S    + G TMT+ + +K + + SAND  VA+AE L  +E+ 
Sbjct: 107 LKWTDRVQASERAASMGGSQIFLEPGETMTVRDLVKGIAIASANDACVAMAEHLDGSEEA 166

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY----MHYFQ 189
           FV  MN  +K LG++ THF N +G+    HY++A D+AI+S  +           ++   
Sbjct: 167 FVARMNQRAKELGMTDTHFANCNGLPAPNHYSSAHDIAIMSRALLMHPEVTAFTSVYSDY 226

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           ++          NTN  V  + G DG+KTG+T  + + + A+A +    +IAV++G    
Sbjct: 227 LRKDTDHPLWLVNTNKLVRFYDGVDGLKTGYTQEAKYCLSATAKRDGFRVIAVVMGEPKP 286

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             RN   A +L+  F +                         +          +   +++
Sbjct: 287 TVRNAEIAGMLNYAFAHYKAVNVYPRGHVVGEVAVKRGTRDRVEAVTAEPVAFVTERSSK 346

Query: 310 MKEAKDKE--SHFIDFEKITLLKNKITK 335
                + +  +      +  ++ + + K
Sbjct: 347 GTYTTEIQWMTLKAPVSRGQVVGHVLVK 374


>gi|90581616|ref|ZP_01237407.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio angustum S14]
 gi|90437199|gb|EAS62399.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio angustum S14]
          Length = 391

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 9/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            ++A A ++     +  A       Y L+D N+G ++A +       PASLTK+MT+YV+
Sbjct: 16  TLLASATVAASPAVVPEAPQIAAKGYILVDYNSGKILAGHNEYEKLAPASLTKMMTSYVI 75

Query: 66  FSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K         + ISKNA        S    + G ++ + +  + +IV S ND  VA
Sbjct: 76  GQEIKNGNISPDDTVVISKNAWAKNFPGSSKMFLEVGKSVKVSDLNRGIIVDSGNDACVA 135

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +++ FV  MN  +KNLG+ +THF N HG+ +   YTT  D++IL+  +  D P
Sbjct: 136 MAEHVAGSQESFVDLMNGWAKNLGMKSTHFANVHGLDRPDLYTTPYDLSILARSLIRDLP 195

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +  K     G    N N       +  DG+KTG T  +G+++V++A +G+  LI+
Sbjct: 196 NEFKIYAEKSFTYNGITQYNRNGLLWDKSMHVDGLKTGHTDNAGYSLVSTATEGNMRLIS 255

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVC 297
           V++G   +N R   S  LL+ GF                 +  +  +       ++E   
Sbjct: 256 VVMGTASKNARLAESKKLLNFGFRFYETLSPNKKDQTIETEKVWMGDTDTVNLGVAENTY 315

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            T       + +      KE       K  ++     +
Sbjct: 316 VTLPRSQAKDLKASFVLTKE-LKAPITKGEVVGKLTYR 352


>gi|53729243|ref|ZP_00133773.2| COG1686: D-alanyl-D-alanine carboxypeptidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209060|ref|YP_001054285.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           pleuropneumoniae L20]
 gi|165977032|ref|YP_001652625.1| penicillin-binding protein 5 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|190150927|ref|YP_001969452.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250838|ref|ZP_07337032.1| penicillin-binding protein 5 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253460|ref|ZP_07339602.1| penicillin-binding protein 5 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248643|ref|ZP_07530657.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307250875|ref|ZP_07532803.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307253259|ref|ZP_07535133.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307257674|ref|ZP_07539433.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307264281|ref|ZP_07545870.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097852|gb|ABN74680.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165877133|gb|ABY70181.1| penicillin-binding protein 5 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189916058|gb|ACE62310.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647704|gb|EFL77918.1| penicillin-binding protein 5 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302650351|gb|EFL80513.1| penicillin-binding protein 5 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854854|gb|EFM87043.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306857125|gb|EFM89253.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859246|gb|EFM91285.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306863849|gb|EFM95773.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306870345|gb|EFN02100.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 392

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 93/353 (26%), Positives = 157/353 (44%), Gaps = 18/353 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFPFL-------SIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L+  +   A+  + F            A       Y L+D N+G+V+A   PD   
Sbjct: 1   MKRTLLKSVSLCALAVSQFATADANVDFGISAPQLNAQTYILMDYNSGNVLASLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MT+YVV   LK+ K   +  +T+++N+                + +++ + +
Sbjct: 61  YPASLTKMMTSYVVGDALKQGKVKNSDMVTVTENSWAQKFPGSSLMFLDLNTQVSVADLM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LI+ S ND AVA+AE    +++ F+  MN   +  GL  T+F   HG+     Y++AR
Sbjct: 121 RGLIIVSGNDAAVALAEHTSGSQQAFIDQMNKFGQQFGLKNTNFTTVHGLDDPNQYSSAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   +  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGVHVIRDQPEEYKIYAEKEFKYNIKKAQPNRNGLLWDKTINVDGMKTGHTSQAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQ 282
           N+VASA   +  LI+V++G      R   S  LL  GF N    K +        +  Y 
Sbjct: 241 NLVASATNNNTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKSLQAGQAVSEQSVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                      ++   T  +      + +   ++++      K  ++   I +
Sbjct: 301 GEADKVQLGSIQDSFVTVPKGKASELKARYELERKNLEAPLAKGQVIGKVIYQ 353


>gi|307130748|ref|YP_003882764.1| D-alanyl-D-alanine carboxypeptidase [Dickeya dadantii 3937]
 gi|306528277|gb|ADM98207.1| D-alanyl-D-alanine carboxypeptidase [Dickeya dadantii 3937]
          Length = 399

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 88/344 (25%), Positives = 151/344 (43%), Gaps = 16/344 (4%)

Query: 5   LVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +V+ A   L  + P             +   + L+D  +G V+AE+  D   +PASLTK+
Sbjct: 10  VVVAAATALMTVSPGLRAEQTPPPPQIEAKAFILIDYASGRVLAESNADARLDPASLTKI 69

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIV 113
           M++YV+   +K  K      +T+ K+A                K G  + +    K +++
Sbjct: 70  MSSYVIGQAIKVGKITPEDKVTVGKDAWATGNPALRGSSLMFLKPGDQIPVSELNKGMVI 129

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND ++A+A+ +  ++  FV  MN  +  LGL+ THF+  HG+   G Y+TARDMA L
Sbjct: 130 QSGNDASIALADYVAGSQDAFVSLMNQYAATLGLANTHFLTVHGLDTPGQYSTARDMARL 189

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASA 232
           +  +  D P        K       + PN N       L  DG+KTG+T  +G ++VASA
Sbjct: 190 TQALIRDVPGEYALHSEKEFTFNNIRQPNRNRLLWSGNLRVDGVKTGYTGGAGHSLVASA 249

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNE 288
           +  D  LI+V+LGA     R + S  LL+ GF        +        +  +       
Sbjct: 250 VDSDMRLISVVLGAPSDAVRFRESEKLLTWGFRFFETVTPVRSDAPFTTQRVWFGTEKQV 309

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +++++   T  +    N +      +       +K  ++   
Sbjct: 310 RLSVAQDAALTAPKGQMKNLKASFTLAQPQLKAPLKKGQVVGTI 353


>gi|153830932|ref|ZP_01983599.1| penicillin-binding protein 5 [Vibrio cholerae 623-39]
 gi|148873587|gb|EDL71722.1| penicillin-binding protein 5 [Vibrio cholerae 623-39]
          Length = 354

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             D+A+L   +  D P+    +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA +G+  L+AV++G  + N R   S  LLS GF                 +  +
Sbjct: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +       + ++   T       +       +K+      +K  ++     +
Sbjct: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDVVGTLYYQ 353


>gi|257465150|ref|ZP_05629521.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           minor 202]
 gi|257450810|gb|EEV24853.1| D-alanyl-D-alanine carboxypeptidase fraction A [Actinobacillus
           minor 202]
          Length = 392

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 98/353 (27%), Positives = 161/353 (45%), Gaps = 18/353 (5%)

Query: 1   MRQFLV----IIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L+    + AMA+ S  +      F   A       Y L+D N+G V+A   PD   
Sbjct: 1   MKKTLLKSVSLCAMALSSFAYADVNTDFGISAPQLNAQTYILMDYNSGAVLASLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MTAYVV   +K+ K   +  +T+++N+                + +++ + +
Sbjct: 61  YPASLTKMMTAYVVGDAIKQGKVRNSDMVTVTENSWAQKFPGSSLMFLDLNTQVSVGDLM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K LI+ S ND AVA+AE    +++ F+  MN  ++  GL  T+F   HG+     +++A 
Sbjct: 121 KGLIIVSGNDAAVALAEHTSGSQQAFIDQMNKYAQQFGLKNTYFTTVHGLDDPNQFSSAH 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   +  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGAHVIRDQPEEYKIYAEKEFKYNIKKPQPNRNGLLWDKTMNVDGMKTGHTDKAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQ 282
           N+VASA   +  LI+V++G      R   S  LL  GF N    K +        +  Y 
Sbjct: 241 NLVASATNANTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKSLPAGQAIKEESVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            N +       ++   T  +    + + +   D +S      K  ++   I +
Sbjct: 301 GNANKVQLGSVQDSFITIPKGKAADLKARYELDSKSLEAPLAKGQVVGKVIYQ 353


>gi|307246518|ref|ZP_07528590.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307255504|ref|ZP_07537310.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259955|ref|ZP_07541668.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262081|ref|ZP_07543735.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306852581|gb|EFM84814.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306861546|gb|EFM93534.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865983|gb|EFM97858.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868260|gb|EFN00083.1| D-alanyl-D-alanine carboxypeptidase dacA [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 392

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 93/353 (26%), Positives = 157/353 (44%), Gaps = 18/353 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFPFL-------SIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L+  +   A+  + F            A       Y L+D N+G+V+A   PD   
Sbjct: 1   MKRTLLKSVSLCALAVSQFAIADANVDFGISAPQLNAQTYILMDYNSGNVLASLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MT+YVV   LK+ K   +  +T+++N+                + +++ + +
Sbjct: 61  YPASLTKMMTSYVVGDALKQGKVKNSDMVTVTENSWAQKFPGSSLMFLDLNTQVSVADLM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LI+ S ND AVA+AE    +++ F+  MN   +  GL  T+F   HG+     Y++AR
Sbjct: 121 RGLIIVSGNDAAVALAEHTSGSQQAFIDQMNKFGQQFGLKNTNFTTVHGLDDPNQYSSAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   +  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGVHVIRDQPEEYKIYAEKEFKYNIKKAQPNRNGLLWDKTINVDGMKTGHTSQAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQ 282
           N+VASA   +  LI+V++G      R   S  LL  GF N    K +        +  Y 
Sbjct: 241 NLVASATNNNTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKSLQAGQAVSEQSVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                      ++   T  +      + +   ++++      K  ++   I +
Sbjct: 301 GEADKVQLGSIQDSFVTVPKGKASELKARYELERKNLEAPLAKGQVIGKVIYQ 353


>gi|326424426|ref|NP_763548.2| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus CMCP6]
 gi|319999816|gb|AAO08538.2| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus CMCP6]
          Length = 391

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 146/350 (41%), Gaps = 16/350 (4%)

Query: 1   MRQFLVIIAMAMLS-------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+  + + +    S            +          Y L+D ++G V+     D   NP
Sbjct: 5   MKSIVSLTSALCASVMAFSAHAAPTVIPDPPALGAKGYVLMDYHSGEVLVAKNADTQLNP 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKL 110
           ASLTKLMTAYV    +       +  + IS+NA        S    + G++++L++  + 
Sbjct: 65  ASLTKLMTAYVAGQEMNRGNIRFSDQVVISRNAWAKNFPDSSKMFIEVGTSVSLEDLYRG 124

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           LI++S ND +VAIAE +  ++  FV  MN+ +  LGL  + F N HG+   G Y+T RD+
Sbjct: 125 LIIQSGNDASVAIAEHVAGSQDAFVSLMNSWADKLGLQNSAFTNPHGLDSTGLYSTPRDI 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIV 229
           A L   I  D P     +        G    N N  +       DGMKTGFT  +G+++ 
Sbjct: 185 AKLGQAIIRDLPSVYPMYSETSFTYNGITQYNRNGLLRDRSIAVDGMKTGFTSGAGYSLA 244

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
            SA  G+  LI+V++G+   ++R   S  LLS GF                    +    
Sbjct: 245 TSATSGNMRLISVVMGSNSTSSREAESKQLLSYGFRFFDTVSPTKANQPLADTRIWMGEK 304

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +     + E++  T  +      Q +             +  ++   I K
Sbjct: 305 NQLSVGLKEDIFLTLPKGDTKKLQAELI-YLPDLSAPILRDQVVGQVIYK 353


>gi|304410306|ref|ZP_07391925.1| Beta-lactamase [Shewanella baltica OS183]
 gi|307301983|ref|ZP_07581741.1| Beta-lactamase [Shewanella baltica BA175]
 gi|304351715|gb|EFM16114.1| Beta-lactamase [Shewanella baltica OS183]
 gi|306914021|gb|EFN44442.1| Beta-lactamase [Shewanella baltica BA175]
 gi|315268757|gb|ADT95610.1| Beta-lactamase [Shewanella baltica OS678]
          Length = 425

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 12/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  L+I + ++       +    A +     + L+D N+G +IAE+      NPASLTK
Sbjct: 43  IKTLLLISSASLPVYAAQPIITPDAPSVAAKAFVLMDYNSGQIIAESNAYESLNPASLTK 102

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K     +   +TISKNA        S    + G+T+ + +  + +I++S
Sbjct: 103 MMTSYVIGQEIKAGNVSVDDDVTISKNAWSKNFSDSSKMFIEVGTTVKVGDLNRGIIIQS 162

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  ++F NAHG+    H +TA DMA+L  
Sbjct: 163 GNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENAHGLDAENHKSTAYDMALLGA 222

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQ 234
            +  D P   H +  K     G K  N N  +    +  DG+KTG T  +G+N+VASA +
Sbjct: 223 ALIRDVPDEYHIYSEKFYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATK 282

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               LI+V++G    + R   S  LL+ GF                 QQ    +   +  
Sbjct: 283 DGMRLISVVMGTQSESARKAESKKLLTYGFRFFETVTPYKAGDSFITQQIWYGDKSTVDL 342

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                  +  ++    +     +  K  ++     E +  L
Sbjct: 343 GVATDTPITISRGRGKDLKANFELTKPLDAPLKKGETVGRL 383


>gi|284007887|emb|CBA73817.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
           [Arsenophonus nasoniae]
          Length = 402

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+ I +  ++       +     +  Y L+D ++G V+  N PD   +PASLTK+MT+YV
Sbjct: 18  LLFIFVFPINVYADGPQVTPQLDVKAYVLMDYHSGKVLTANNPDERLDPASLTKIMTSYV 77

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAND 118
           V   +K  K  +   +T+ ++A                K G  +++ +  + ++++S ND
Sbjct: 78  VGQAIKAGKISVNDLVTVGEDAWATGNPVLHGSSLMFLKPGDRVSVLDLNRGIVIQSGND 137

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  ++  FV  MN    +LGL  THF   HG+   G ++TA DMAIL+  + 
Sbjct: 138 ACIALADYVAGSQTVFVDLMNQYVTSLGLKNTHFKTVHGLDSEGQFSTAHDMAILTQALI 197

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            D P        K       K  N N       L  DG+KTG T  +G+N++ SA  G  
Sbjct: 198 RDVPDEYLLHGEKVFTYNKIKQFNRNRLLWSKNLQVDGVKTGHTSGAGYNLITSATNGPM 257

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LIAV+LGA     R   S  LL+ GF   T    I        +  +  N S  +    
Sbjct: 258 RLIAVVLGAGSDRIRFTESEKLLNWGFRFFTTVIPITADKPFTTEKVWYGNRSTVLLGTE 317

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++   T  +    + +   + + +       K  ++   
Sbjct: 318 KDAAITIPKGREQDLKTTYSLNSDYLKAPLRKNQVVGTI 356


>gi|240139670|ref|YP_002964147.1| putative penicillin binding protein,
           beta-lactamase/transpeptidase-like superfamily
           [Methylobacterium extorquens AM1]
 gi|240009644|gb|ACS40870.1| putative penicillin binding protein,
           beta-lactamase/transpeptidase-like superfamily
           [Methylobacterium extorquens AM1]
          Length = 403

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   ++   +  P  +        +  L+D ++G V+ E   D P++PAS+ KLMTA +
Sbjct: 1   MLAAIVSAFLHPAPARAQTFQTAAAHAILIDADSGSVLFEKAADEPFSPASMAKLMTAEI 60

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  +KE +  + T  T++++A     +     +   +  S + L + L+ LIV+S ND 
Sbjct: 61  VFRAIKEGRLSMDTEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ IAE++  TE  F   MN  +K +GL+ + F NA G        TARDMA ++  +  
Sbjct: 121 AITIAENMAGTEDAFAGMMNQRAKEIGLTRSTFRNATGYSAPDQKVTARDMARIAQYLID 180

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            +P++   +  +       K  N N  +   +GADG+KTG+   SG+ +  SA+Q  Q L
Sbjct: 181 TYPEFYKIYSEREFTWNKIKQQNRNPLLTLDIGADGLKTGYLEESGYALTGSAVQNGQRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEE- 295
           I V+ G      R   +  ++  GF     R+       + +          VP ++ + 
Sbjct: 241 IMVVSGLKTARDRAAEARKMMEWGFRAFEPRQVFAANETVAEVSVFGGEKGSVPVVANKP 300

Query: 296 --VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +   +        ++       +      ++  L+
Sbjct: 301 VRLLLPRGTSDRVTAKVVYQGPLVAPVAQGREVGRLR 337


>gi|262395893|ref|YP_003287746.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. Ex25]
 gi|262339487|gb|ACY53281.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. Ex25]
          Length = 389

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 93/333 (27%), Positives = 141/333 (42%), Gaps = 9/333 (2%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++       +  A       Y L+D +TG V+ E       NPASLTKLMTAYV    + 
Sbjct: 20  SLAYAAPTVVPNAPELSSRGYVLMDFHTGKVLVERDAHKRLNPASLTKLMTAYVAGQEIN 79

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                L   + IS+NA        S    +  ++++L +  + L+V+S ND +VAIAE +
Sbjct: 80  AGNITLDDEVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLYRGLVVQSGNDASVAIAEHV 139

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  FV  MN+ +  L L+ T F N HG+   G Y+T  D+A L   I  D P     
Sbjct: 140 AGSESGFVSLMNSWAAKLELNNTAFTNPHGLDSDGLYSTPYDIAKLGQAIIRDLPDIYPL 199

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +        G    N N       +  DGMKTG+T  +G+++  SA QGD  LIAV++GA
Sbjct: 200 YSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYSLATSATQGDMRLIAVVMGA 259

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKE 302
              N R   S  LLS GF             +      +          ++ +V  T  +
Sbjct: 260 KSENIRESESKQLLSYGFRFYDTVMPTEAGTEVANARVWMGEQDELKVGVANDVYLTLPK 319

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 Q +  +          +  ++   + K
Sbjct: 320 GDVKKLQAEV-EYNGDLVAPISQQQVVGKVLYK 351


>gi|114566158|ref|YP_753312.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114337093|gb|ABI67941.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 381

 Score =  205 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 87/339 (25%), Positives = 142/339 (41%), Gaps = 6/339 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
             ++ + + +++      +     K   Y L+D ++G V+          PAS+TKLMT 
Sbjct: 9   WLVLWVMVFIIAAPTRLEAEVVEVKAESYVLMDADSGKVLLAKNEHKQLAPASMTKLMTL 68

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +    L+E K  L   +  S+NA +   S    + G  M+ ++ L  + V SAND  VA
Sbjct: 69  ILAMEALEEGKVTLKDKVVTSENAWKMGGSQIYLEPGEQMSYEDMLIAIAVGSANDACVA 128

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE L  T + FV  MN+ +K LGL  THF+N++G+    HYT+A DMA++         
Sbjct: 129 VAEHLEGTHQNFVDKMNHKAKMLGLKNTHFINSYGLSAPKHYTSAYDMAVIGREALAHPK 188

Query: 183 Q-YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                  +   L     K  NTN  +  + GADG KTG+T  + + +  +A +    LI+
Sbjct: 189 ILEYSSIKEYDLRQGEFKLFNTNKLLWWYQGADGFKTGWTDEAKYCLAGTAKRDGLRLIS 248

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVC 297
           V++ + +++   + S  LL+ GF     +  I            +           EEV 
Sbjct: 249 VVMASPEKHGNFRDSMQLLNYGFARYAFKSLIGQGKSCGIVKIGKGIEEQVEVLAEEEVG 308

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            T  +        K             K   L      K
Sbjct: 309 CTVIKGEEKKINSKT-SLLPYVDAPVSKGQKLGEISLYK 346


>gi|218676325|ref|YP_002395144.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio splendidus
           LGP32]
 gi|218324593|emb|CAV26124.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio splendidus
           LGP32]
          Length = 394

 Score =  205 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 149/352 (42%), Gaps = 23/352 (6%)

Query: 1   MRQF----LVIIAMAMLSNIF----------PFLSIAETNKLPYYTLLDTNTGHVIAENY 46
           M++F    L +++M ++SN              +    +     Y L+D N+G V+ E  
Sbjct: 1   MKRFSKYSLPLLSMFIVSNAAIVANTAVAAPSIVPSPPSLGAKGYVLIDFNSGDVLVEKN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMT 103
                NPASLTKLMT+YV    +K         + IS+NA        S    +  + + 
Sbjct: 61  AHTKLNPASLTKLMTSYVAGQEMKRGNISADDQVRISENAWAKNFPDSSKMFIEVNTDVA 120

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           + +  + LI++S ND +VAIAE +  ++  FV  MN+ + +L L  THF NAHG+     
Sbjct: 121 MMDLYRGLIIQSGNDASVAIAEHVAGSQDAFVDLMNSWAASLKLENTHFANAHGLDADDL 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTC 222
           Y+T  D+A+L   I  D P     +  +          N N       L  DGMKTG+T 
Sbjct: 181 YSTPYDIALLGRAIIRDLPDVYGLYSERSFSYNKITQHNRNGLLRDRSLTVDGMKTGYTS 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----K 278
            +G+++ +SA QG+  LIAV++GA    +R   S  LLS GF                 +
Sbjct: 241 GAGYSLASSATQGEMRLIAVVMGASSVKSRESDSKQLLSYGFRFFDTLNPHQGGDQVAEE 300

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +          ++E+   T  +  +           E       +   L 
Sbjct: 301 KVWFGAQDTLKLGVAEDTFITLPKSDSKKLTASIDLISE-LKAPISEGQTLG 351


>gi|238784923|ref|ZP_04628922.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia bercovieri ATCC
           43970]
 gi|238714138|gb|EEQ06151.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia bercovieri ATCC
           43970]
          Length = 401

 Score =  205 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 155/346 (44%), Gaps = 14/346 (4%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++F     ++ +A+ +                Y L+D N+G V+AE   D   +PASLT
Sbjct: 10  IKKFTFSAGLLLLALPTAHAADDPAVPPVDAKAYVLMDYNSGKVLAEANGDQRLDPASLT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A                K G  + L +  K +
Sbjct: 70  KIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATGNPALRGSSLMFLKPGDQVKLSDLNKGI 129

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MNN +K LGL+ T+FM  HG+   G Y+TARDMA
Sbjct: 130 VIQSGNDASIALADYVAGSQDSFVGLMNNYAKALGLTNTNFMTVHGLDAPGQYSTARDMA 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +L   +  D P+     + K       +  N N     T L  DGMKTGFT  +G N+VA
Sbjct: 190 VLGQALIRDVPEEYALHKEKEFTFNMIRQINRNRLLWNTNLNVDGMKTGFTTGAGHNLVA 249

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LLS GF        I           +  +  
Sbjct: 250 SATDGPMRLISVVLGAPSDRVRFSESEKLLSWGFRFYETVVPIKTTKPFVTQKVWFGDTG 309

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++E+   T  +    N +     D+        K  ++   
Sbjct: 310 QAELGVAEDAAITIPKGQMKNLKASYKLDQTELRAPLTKHQVVGTI 355


>gi|238762044|ref|ZP_04623017.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia kristensenii
           ATCC 33638]
 gi|238699772|gb|EEP92516.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia kristensenii
           ATCC 33638]
          Length = 397

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 151/346 (43%), Gaps = 14/346 (4%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++      ++ +++         +        Y L+D N+G V+AE   D   +PASLT
Sbjct: 10  LKKLTFSAGLLFLSLPYAHAADSPVPPAIDAKAYVLMDYNSGKVLAEGNSDQRLDPASLT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A                K G  + L +  K +
Sbjct: 70  KIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATGNPALRGSSLMFLKPGDQVKLSDLNKGI 129

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MN  +K LGL+ T+FM  HG+   G Y+TA DMA
Sbjct: 130 VIQSGNDASIALADYIAGSQDSFVGLMNKYAKALGLNNTNFMTVHGLDAPGQYSTAHDMA 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +L   +  D P      + K       +  N N     T +  DGMKTG+T  +G N+VA
Sbjct: 190 VLGQALIRDVPDEYALHKEKEFTFNKIRQINRNRLLWNTNINVDGMKTGYTTGAGHNLVA 249

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LL+ GF        I           +  +  
Sbjct: 250 SATDGPMRLISVVLGAPSDRVRFSESEKLLTWGFRFYETVVPIKATKPFVTQKVWFGDTG 309

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++E+   T  +    N +     ++        K  ++   
Sbjct: 310 QVELGVAEDAAITIPKGQMKNLKASYKLNETELRAPLAKHQVVGTI 355


>gi|255100309|ref|ZP_05329286.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile QCD-63q42]
          Length = 387

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 18/350 (5%)

Query: 1   MRQFL-----VIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++       ++IA+  LS  F        +           L+D  +G ++ E      
Sbjct: 1   MKKLASTALAILIALTPLSFSFANNKENADANQLNISSKSAILMDVGSGQILYEKDAHKK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS+TK+MT  ++   L   K  L   + +S+ AS    S    + G T  +D  LK 
Sbjct: 61  LPPASVTKVMTMLLIVEALDSGKIKLDDEVQVSETASSMGGSQIFLEPGETQKVDTLLKG 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + V SAND  VA+AE L  + + FV  MN  +K L ++ THF N +G+    HYT+A D+
Sbjct: 121 IAVASANDACVAMAEHLAGSVEGFVDRMNAKAKELNMNDTHFANTNGLPVANHYTSAHDI 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASG 225
           A++S  +        +        + GKK       NTN  +  + GA G+KTGFT  + 
Sbjct: 181 ALMSRELLKHEMISKYLTTWMDKVVVGKKQVTVGLANTNKLIKHYQGATGVKTGFTQEAK 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--- 282
           + + ASA +G+  L+A  LGA     R   ++SLL+ GF N    K  +           
Sbjct: 241 YCLSASAKRGNTHLVAATLGAETSPERFNDASSLLNYGFANYESVKLCSKGDNIATLTLD 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +   N+V  +++E   T  +  +     K+ +  ++  +  +K T+L   
Sbjct: 301 KADENKVKLVAKEDLNTLIKKGSSKEFEKKIEIVKNPKMPIKKGTVLGKI 350


>gi|218531093|ref|YP_002421909.1| serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           chloromethanicum CM4]
 gi|218523396|gb|ACK83981.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           chloromethanicum CM4]
          Length = 418

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   ++   +  P  +        +  L+D ++G V+ E   D P++PAS+ KLMTA +
Sbjct: 16  MLAAIVSAFLHPAPSRAQTFQTAAAHAILIDADSGSVLFEKAADEPFSPASMAKLMTAEI 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  +KE +  + T  T++++A     +     +   +  S + L + L+ LIV+S ND 
Sbjct: 76  VFRAIKEGRLSMDTEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ IAE++  TE  F   MN  +K +GL+ + F NA G        TARDMA ++  +  
Sbjct: 136 AITIAENMAGTEDAFAGMMNQRAKEIGLTRSTFRNATGYSAPDQKVTARDMARIAQYLID 195

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            +P++   +  +       K  N N  +   +GADG+KTG+   SG+ +  SA+Q  Q L
Sbjct: 196 TYPEFYKIYSEREFTWNKIKQQNRNPLLTLDIGADGLKTGYLEESGYALTGSAVQNGQRL 255

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEE- 295
           I V+ G      R   +  ++  GF     R+       + +          VP ++ + 
Sbjct: 256 IMVVSGLKTARDRAAEARKMMEWGFRAFEPRQVFAANETVAEVSVFGGEKGSVPVVANKP 315

Query: 296 --VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +   +        ++       +      ++  L+
Sbjct: 316 VRLLLPRGTSDRVTAKVVYQGPLVAPVAQGREVGRLR 352


>gi|50121610|ref|YP_050777.1| penicillin-binding protein 6 [Pectobacterium atrosepticum SCRI1043]
 gi|49612136|emb|CAG75586.1| penicillin-binding protein 6 [Pectobacterium atrosepticum SCRI1043]
          Length = 401

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/338 (27%), Positives = 152/338 (44%), Gaps = 11/338 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++  A+       L          + L+D ++G V+AE+  D   +PASLTK+M +YV+
Sbjct: 18  VLLVGAVPFTYAEQLPAVPQIDAKAFILIDHDSGKVLAESNADERLDPASLTKIMASYVI 77

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K   T  +T+ K+A                K G  + +    K ++++S ND 
Sbjct: 78  GQALKSGKIRPTDEVTVGKDAWATGNPALRGSSLMFLKPGDRIPVSELNKGIVIQSGNDA 137

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++A+A+ +  ++  FV  MNN +K L L+ THF+  HG+   G Y+TARDMA+L   +  
Sbjct: 138 SIALADYVAGSQDSFVSLMNNYAKALNLTNTHFLTVHGLDAPGQYSTARDMALLGQALIR 197

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     T L  DG+KTG T  +G N+VASA +G+  
Sbjct: 198 DVPEEYALHKEKEFTFNNIRQPNRNRLLWSTNLNVDGVKTGHTNGAGHNLVASATEGNMR 257

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
           LI+V+LGA   + R + S  LL+ GF        I        +  +          +++
Sbjct: 258 LISVVLGAQTDSIRFRESEKLLTWGFRFFETVTPIKSDAPFTTQRVWFGTEKEARLGVAQ 317

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T  +    N +     +         K  ++   
Sbjct: 318 NAALTIPKGQMKNLKASFTLNPPQLSAPLTKNQVVGTI 355


>gi|171320084|ref|ZP_02909152.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           MEX-5]
 gi|171094681|gb|EDT39727.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           MEX-5]
          Length = 437

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 14/336 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 62  FTGAPATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 121

Query: 69  LKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   +T S+         S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 122 LDKKKISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 181

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 182 VGGSEGQFVTLMNAEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYG 241

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 242 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 301

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G      R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 302 SVMMGEPKEGERTQDSMKMLNYGYSAFDAVRLFKGGQAMSTPRVYKGKENTVQVGVKSDQ 361

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            V   +        ++       +   + +++  +K
Sbjct: 362 WVTVPRGLGDKVKPEVDVNAPLIAPLAEGQQVGTVK 397


>gi|23099297|ref|NP_692763.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
 gi|22777526|dbj|BAC13798.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Oceanobacillus iheyensis HTE831]
          Length = 388

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 19/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK---------LPYYTLLDTNTGHVIAENYPDHPW 51
           MR+   I+ + +L  +F   +++                  L++ +TG ++ +       
Sbjct: 1   MRKIRNIMIIGLLGVLFFGHTVSAEESNQEVNLIEDATSGILMEQDTGTILYDKNAHEQL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MT  ++   L++        + +S  A+    S    + G  MT+++ LK +
Sbjct: 61  PPASMTKIMTLLLIMESLEKGDIAKDDVVIVSDKAASMGGSQIFLEAGEEMTVNDLLKGV 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            V S ND +VA+AE +  +E+ FV  MN  +K L L  T F N  G+ +  HY++A DMA
Sbjct: 121 AVASGNDASVALAEKIAGSEEAFVNKMNEKAKELNLKNTLFQNTTGLPEENHYSSAYDMA 180

Query: 172 IL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           I+          T++      + ++  +       NTN  V  + GADG+KTG+T  + +
Sbjct: 181 IMANELLKHESITEYTSIYEDY-LRQGQDNEFWLVNTNKLVRFYKGADGLKTGYTSEAKY 239

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
            + A+A + +  ++AV++GA     RN +   LL   F++       +   K      L 
Sbjct: 240 CLTATAKRDNMRVVAVVMGAKSPKERNSMVTELLDYAFHSYETNPLFSKGDKVTEVDLLK 299

Query: 287 NEVPNISE----EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +   +       V T  K+         E K +ES     +K   +   I K
Sbjct: 300 ADQSKVDIVTDHSVSTIHKKGDEKKNISTEVKLQESWTFPIQKGDEVGKLIIK 352


>gi|296272811|ref|YP_003655442.1| beta-lactamase [Arcobacter nitrofigilis DSM 7299]
 gi|296096985|gb|ADG92935.1| Beta-lactamase [Arcobacter nitrofigilis DSM 7299]
          Length = 389

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/353 (28%), Positives = 163/353 (46%), Gaps = 17/353 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++ +  I +          +  E         K   Y L+D +T  ++     D    P
Sbjct: 1   MKKIICSIFIITSLLAQCLQADEEKSIQPLINIKAKSYILMDYDTKEILLSKNTDEKLPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTKLMT+Y+V + +   +  L   + ISK A +   S +     + + L   +K +IV
Sbjct: 61  ASLTKLMTSYIVSTKINSGEISLKDKVFISKKAWKMTGSRTFLNVNTKVDLSKLIKGMIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  +AIAE +  +EK+FV+ MN  +K L L  TH+ +A G+    HY+TA D+A+L
Sbjct: 121 QSGNDAVIAIAEHISGSEKEFVKLMNKYAKKLNLKNTHYNDATGLPTKDHYSTAHDIALL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  I  DFP +  ++ IK  +       N N  +      DG+KTG T A+G+ + +SA 
Sbjct: 181 SRAIIKDFPDHYSWYSIKNFKYNNISQNNRNKLLWKDTSVDGLKTGHTMAAGYCLASSAK 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVP 290
           + +  LIAV++G      R K S  LL+ GF      K       I K    +   NEV 
Sbjct: 241 RKNMRLIAVVMGTKSSKARAKESEKLLNYGFKYYDTHKLYTANSIIKKSKIWEGKKNEVS 300

Query: 291 NISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITL----LKNKITKK 336
              ++   +   + +    +T +   K   +     +K+      L +KI KK
Sbjct: 301 LGLDKDLTITIIRSQNKQLHTAINIKKPIIATVNKGQKLGTIEVYLGDKILKK 353


>gi|293609746|ref|ZP_06692048.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828198|gb|EFF86561.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 397

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 8/337 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 22  IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 82  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 141

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G+  T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 142 KAMAEHIAGNEGTFAHMMNQEAKRIGMVNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 201

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 202 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 261

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEV 296
           +VI G    + R   + +LL+ GF N                  +          ++E  
Sbjct: 262 SVIFGTPSMSERADQTRTLLAWGFANFETANVQPANQVLAKAKVWFGKEDEVQVGLAENF 321

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             T  +    +    +   + +     +K  ++   +
Sbjct: 322 SVTMPKG-KADGIKTQLVVQPNLNAPLQKGQVVGKLV 357


>gi|260912849|ref|ZP_05919335.1| D-alanyl-D-alanine carboxypeptidase DacA [Pasteurella dagmatis ATCC
           43325]
 gi|260633227|gb|EEX51392.1| D-alanyl-D-alanine carboxypeptidase DacA [Pasteurella dagmatis ATCC
           43325]
          Length = 395

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 13/344 (3%)

Query: 5   LVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           L+  A A+  N F         A       Y L+D N+G V+A   PD    PASLTK+M
Sbjct: 13  LLAGAFALPINAFAQDVDYGITAPQLNAQTYILMDYNSGAVLASLNPDQRQYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T+YVV   LK+ K      +TI ++A        S         +++ +  + +I+ S N
Sbjct: 73  TSYVVGDALKQGKINNNDMVTIGESAWGKNFPGSSKMFLNLNQQVSVSDLNRGVIIVSGN 132

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VAIAE +  +   FV+ MN   +  GL  THF + HG+     Y+++RDMAI+   +
Sbjct: 133 DASVAIAEHVSGSVPAFVEAMNKYVQQFGLKNTHFTSVHGLDDDNQYSSSRDMAIIGAHL 192

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ-G 235
             D P+    +  K       K  N N       +  DG+KTG T  +G+N+V+SA    
Sbjct: 193 IRDLPEEYKIYAEKDFTFNKIKQNNRNGLLWDKTIQVDGIKTGHTDKAGYNLVSSATNSN 252

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPN 291
           +  LI+V++G      R   S  LL  GF N    K +        +  Y  ++S+    
Sbjct: 253 NMRLISVVMGVPTIKGREVESKKLLQWGFANFETFKTLEAGKAISEQSVYYGDISDVALG 312

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           + E+   T  +  N + + +   D +       K  ++   + +
Sbjct: 313 VLEDSFITVPKGRNTDLKARYELDTKYLQAPLAKGQVVGKVVYQ 356


>gi|254227305|ref|ZP_04920737.1| beta-lactamase, putative [Vibrio sp. Ex25]
 gi|262396428|ref|YP_003288281.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. Ex25]
 gi|151939917|gb|EDN58743.1| beta-lactamase, putative [Vibrio sp. Ex25]
 gi|262340022|gb|ACY53816.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. Ex25]
          Length = 385

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    +++++  +  +             K   Y L+D  +G +IAE+       PASL
Sbjct: 1   MKVSLARWIIVTCLISVPTFAVVTPNPPQLKAKGYVLMDFQSGAIIAEHNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSEGIQTSPTDMAKL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I  D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIINDVPAVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGKMRLISVVMGTPSKQARTSQSKNLLSYGFRFYDTKQVAKQGQVESKVRVWKGNANQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               + +   T    +          + E       +   +   + K
Sbjct: 301 EAIFANDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|37676160|ref|NP_936556.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus YJ016]
 gi|37200701|dbj|BAC96526.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus YJ016]
          Length = 391

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 89/350 (25%), Positives = 146/350 (41%), Gaps = 16/350 (4%)

Query: 1   MRQFLVIIAMAMLS-------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+  + + +    S            +          Y L+D ++G V+     D   NP
Sbjct: 5   MKSIVSLTSALCASVMAFSAHAAPTVIPDPPALGAKGYVLMDYHSGEVLVAKNADTQLNP 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKL 110
           ASLTKLMTAYV    +       +  + IS+NA        S    + G++++L++  + 
Sbjct: 65  ASLTKLMTAYVAGQEMNRGNIRFSDQVVISRNAWAKNFPDSSKMFIEVGTSVSLEDLYRG 124

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           LI++S ND +VAIAE +  ++  FV  MN+ +  LGL  + F N HG+   G Y+T RD+
Sbjct: 125 LIIQSGNDASVAIAEHVAGSQDAFVSLMNSWADKLGLQNSAFTNPHGLDSTGLYSTPRDI 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIV 229
           A L   I  D P     +        G    N N  +       DGMKTGFT  +G+++ 
Sbjct: 185 AKLGQAIIRDLPSVYPMYSETSFTYNGITQYNRNGLLRDRSIAVDGMKTGFTSGAGYSLA 244

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
            SA  G+  LI+V++G+   ++R   S  LLS GF                    +    
Sbjct: 245 TSATSGNMRLISVVMGSNSTSSREAESKQLLSYGFRFFDTVSPTKANQPLADTRIWMGEK 304

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +     + E++  T  +      Q +             +  ++   + K
Sbjct: 305 NQLSVGLKEDIFLTLPKGDTKKLQAELI-YLPDLSAPILRDQVVGQVVYK 353


>gi|319785898|ref|YP_004145373.1| beta-lactamase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464410|gb|ADV26142.1| Beta-lactamase [Pseudoxanthomonas suwonensis 11-1]
          Length = 407

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/323 (26%), Positives = 151/323 (46%), Gaps = 11/323 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
            ++   + ++D  TG V+A    D    PAS+TK+MT+YV+ + +   +      + +S+
Sbjct: 52  PSQATAWLVMDYATGQVLAGENVDEQVEPASITKVMTSYVIAAEMAAGRVKPDDQVLMSE 111

Query: 85  NASEYPPSNST-----FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            A     + +      F    T  L    K + V+S ND A+A+AE +  T++ F   MN
Sbjct: 112 RAWREGGARTDGSFSGFPVNQTAPLVEMEKGMAVQSGNDAAIALAEHVAGTQEAFADLMN 171

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
           + +  +G+  +HF+NAHG+   GHY+TARD+A+L      D+P+   Y +IK   + G  
Sbjct: 172 SYAAKIGMKNSHFVNAHGLSAEGHYSTARDLALLGRAFVRDYPEQYGYNKIKEFTVNGIT 231

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            PN N  +      DG+KTG    +G+ +++SA +GDQ L+AV++G      R   S +L
Sbjct: 232 QPNRNLLLWRDSSVDGIKTGHHSKAGYCLMSSAQRGDQRLVAVLMGGASERQRADDSLAL 291

Query: 260 LSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEA 313
           L+ GF      +             ++         ++E   V   +    +    M+  
Sbjct: 292 LNWGFRFHETHRLYEPGKPVASLKVWKGKADQVQLGVAEPLLVSVGRGRYGDLKPAMEVP 351

Query: 314 KDKESHFIDFEKITLLKNKITKK 336
           +   +     ++I  +K  +  +
Sbjct: 352 RSLVAPIAAGQQIGTVKVSLDGQ 374


>gi|260769394|ref|ZP_05878327.1| D-alanyl-D-alanine carboxypeptidase [Vibrio furnissii CIP 102972]
 gi|260614732|gb|EEX39918.1| D-alanyl-D-alanine carboxypeptidase [Vibrio furnissii CIP 102972]
          Length = 390

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 96/335 (28%), Positives = 148/335 (44%), Gaps = 7/335 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  A        +          Y L+D NTG V+ E+  +   NPASLTKLMT+YV   
Sbjct: 17  LLSATSFAAPIVVPNPPQLSAKGYVLMDYNTGQVLVEHNANEKMNPASLTKLMTSYVAGQ 76

Query: 68  FLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            +K      T  +TIS+ A        S    + G+++ + +  + LIV+S ND +VAIA
Sbjct: 77  EMKRGNIKPTDQVTISQKAWAKNFPDSSKMFIEVGTSVNMMDLYRGLIVQSGNDASVAIA 136

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E  FV  MN+ ++ LGL+ T F N HG+   G YTT  D+A L+  I  D P+ 
Sbjct: 137 EHVAGSENAFVDLMNSWAQRLGLNNTAFTNPHGLDSDGLYTTPYDIAKLAQAIIRDLPEI 196

Query: 185 MHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              +        G    N N       +  DGMKTGFT  +G+++V SA  G+  LI+ +
Sbjct: 197 YPIYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGFTSGAGYSLVTSATNGNMRLISAV 256

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +GA    +R   S  LLS GF                  +    E  +++  V  T    
Sbjct: 257 MGANSMKSRESDSKQLLSYGFRFFDTVAPHKQGETIENARVWMGERDDLAIGVAQTTYLT 316

Query: 304 INYNTQMKEAKDKE---SHFIDFEKITLLKNKITK 335
           +N     + +   E         ++  ++   I +
Sbjct: 317 VNKGEMSQLSGLIELDRDLKAPIQQGDVVGKVIYQ 351


>gi|209694545|ref|YP_002262473.1| penicillin-binding protein 5 precursor (D-alanyl-D-alanin
           carboxypeptidase fraction A) [Aliivibrio salmonicida
           LFI1238]
 gi|208008496|emb|CAQ78667.1| penicillin-binding protein 5 precursor (D-alanyl-D-alanin
           carboxypeptidase fraction A) [Aliivibrio salmonicida
           LFI1238]
          Length = 391

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 12/346 (3%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++ ++   I+   +       +  A       Y L+D ++G V+AE   +   NPASLT
Sbjct: 8   LKRIILSSFILGSTVAVAAPAVIPNAPQIAAKGYVLMDYHSGKVLAEKDMNVRMNPASLT 67

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVK 114
           K+MT+YV+   +      +   + ISKNA        S    + GS + + +  + +IV+
Sbjct: 68  KMMTSYVIGQEIASGNISMDDDVVISKNAWAKNFPGSSKMFIEVGSVVKVRDLNQGIIVQ 127

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  VA+AE +  +E  FV  MN  SK L L  THF N HG+ +   Y+T  DMA++ 
Sbjct: 128 SGNDACVAMAEHVAGSEDAFVDLMNAWSKTLNLQNTHFANVHGLDRDDLYSTPYDMALIG 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAI 233
             +  D P+    +  K     G    N N       +  DG+KTG T  +G+N+V+SA 
Sbjct: 188 QALIRDVPEEYRVYSEKSYTYNGITQYNRNGLLWDKSMNVDGIKTGHTDGAGYNLVSSAT 247

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEV 289
           +G   L+AV++G    N R   S  LL+ GF               + +  +  +     
Sbjct: 248 EGKMRLVAVVMGTKSGNARKAESKKLLNYGFRFFETVSPHKANETFVTEKVWMGSTDEVA 307

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             ++E+   T               +K +      K  ++     +
Sbjct: 308 LGVAEDTYVTLPRGQAKKMTASFVLEK-TLKAPISKGDVVGKLFYQ 352


>gi|269965808|ref|ZP_06179903.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 40B]
 gi|269829543|gb|EEZ83782.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 40B]
          Length = 385

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    ++ ++  +  +             +   Y L+D  +G +IAE+       PASL
Sbjct: 1   MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I +D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYNTKQVAKKGEVESKVRVWKGNANQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       +   +   + K
Sbjct: 301 EAIFAKDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|262278278|ref|ZP_06056063.1| D-Ala-D-Ala-carboxypeptidase [Acinetobacter calcoaceticus RUH2202]
 gi|262258629|gb|EEY77362.1| D-Ala-D-Ala-carboxypeptidase [Acinetobacter calcoaceticus RUH2202]
          Length = 382

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 8/337 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L +        + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGDLTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G+  T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMVNTQFVNSTGMPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   L+
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLV 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEV 296
           +VI G      R   + +LL+ GF N                  +          ++E  
Sbjct: 247 SVIFGTPSMAERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKEDEVQVGLAENF 306

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             T  +    +    +   + +     +K  ++   +
Sbjct: 307 SVTMPKG-KADGIKTQLVVQPNLNAPLQKGQVVGKLV 342


>gi|257439156|ref|ZP_05614911.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257198407|gb|EEU96691.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 412

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 143/317 (45%), Gaps = 12/317 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L++  TG V+ E  PD     AS+TKLMT  + F  ++  K  L TP+ +S+
Sbjct: 60  QLECRAAILMEPETGRVLYEKAPDERMPIASITKLMTLLLTFEAIRGGKLTLDTPVPVSE 119

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A     S    + G   TLD  L+ + V SAND AVA+AE +  +E  FV+ MN  +  
Sbjct: 120 HAYHMGGSQIWLEPGEQFTLDEMLRAICVSSANDAAVAVAELVGGSEPVFVEQMNARAAE 179

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--YMHYFQIKGLEIKGKKYPN 202
           LG++ T F NA G+   GH +TARD+AILS  +    P+  +        L     +  N
Sbjct: 180 LGMTNTTFRNACGLDTEGHLSTARDVAILSRYLLNTCPELLHYTGIWTDSLRNGQTQLVN 239

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  +  + G  G+KTG T  +G  I ASA +   +LIAV+LG+     R   + +LL  
Sbjct: 240 TNKLLRRYSGITGLKTGTTSGAGVCISASATRDGLTLIAVVLGSPSSADRFHSATTLLDY 299

Query: 263 GFYNKTDRKKINYIIKDF---YQQNLSNEVPN----ISEEVCTTQKEIINYNTQMKEAKD 315
           GF N           +      + +  + VP     + E +   +        ++     
Sbjct: 300 GFANYAAAPLPTLPERPLELAVKGSAEDSVPLDYAALPETILIEKGTASALRAELTLP-- 357

Query: 316 KESHFIDFEKITLLKNK 332
            E+     EK   +   
Sbjct: 358 -EALEAPVEKGQTVGKV 373


>gi|323936908|gb|EGB33191.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1520]
          Length = 388

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKNLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|115352994|ref|YP_774833.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           AMMD]
 gi|115282982|gb|ABI88499.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Burkholderia ambifaria AMMD]
          Length = 436

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 14/336 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 61  FTGAPATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 120

Query: 69  LKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   IT S+         S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 121 LDKKKISMEQIITPSEAVRRVGLDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 180

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 181 VGGSEGQFVTLMNAEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYG 240

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 241 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 300

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G      R + S  +L+ G+      +             Y+   S     +  + 
Sbjct: 301 SVMMGEPKEGERTQDSMKMLNYGYSAFDAVRLFKGGQAMSTPRVYKGKESTVQVGVKSDQ 360

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            V   +        ++       +   + +++  +K
Sbjct: 361 WVTVPRGLGDKVKPEVDVNAPLIAPLAEGQQVGTVK 396


>gi|254562080|ref|YP_003069175.1| penicillin binding protein, beta-lactamase/transpeptidase-like
           superfamily [Methylobacterium extorquens DM4]
 gi|254269358|emb|CAX25324.1| putative penicillin binding protein,
           beta-lactamase/transpeptidase-like superfamily
           [Methylobacterium extorquens DM4]
          Length = 403

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 11/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   ++   +  P  +        +  L+D ++G V+ E   D P++PAS+ KLMTA +
Sbjct: 1   MLAAIVSAFLHPAPSRAQTFQTAAAHAILIDADSGSVLFEKAADEPFSPASMAKLMTAEI 60

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  +KE +  + +  T++++A     +     +   +  S + L + L+ LIV+S ND 
Sbjct: 61  VFRAIKEGRLSMDSEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ IAE++  TE  F   MN  +K +GL+ + F NA G        TARDMA ++  +  
Sbjct: 121 AITIAENMAGTEDAFAGMMNQRAKEIGLTRSTFRNATGYSAPDQKVTARDMARIAQHLID 180

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            +P++   +  +       K  N N  +   +GADG+KTG+   SG+ +  SA+Q  Q L
Sbjct: 181 TYPEFYKIYSEREFTWNRIKQQNRNPLLTLDIGADGLKTGYLEESGYALTGSAVQNGQRL 240

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEE- 295
           I V+ G      R   +  ++  GF     R+       + +          VP ++ + 
Sbjct: 241 IMVVSGLKTARDRAAEARKMMEWGFRAFEPRQVFAANETVAEVSVFGGEKGSVPVVANKP 300

Query: 296 --VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +   +        ++       +      ++  L+
Sbjct: 301 VRLLLPRGTSDRVTAKVVYQGPLVAPVAQGREVGRLR 337


>gi|134297080|ref|YP_001120815.1| penicillin-binding protein 6 [Burkholderia vietnamiensis G4]
 gi|134140237|gb|ABO55980.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Burkholderia vietnamiensis G4]
          Length = 437

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 150/337 (44%), Gaps = 14/337 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK
Sbjct: 67  ATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKK 126

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 127 ISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 186

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN+ ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY   F  K
Sbjct: 187 GQFVTLMNDEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEK 246

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLIAVILG 245
             +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L++V++G
Sbjct: 247 EFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLVSVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTT 299
                 R   S  +L+ G+      +             Y+   +     +  +  V   
Sbjct: 307 EPKEGDRTADSMKMLNYGYSAFDSVRLFKGGQAMSTPRIYKGKANTVQVGVKGDQWVTVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +       T++       +   + +++  +K     K
Sbjct: 367 RGFGDKVKTEVDVNAPLIAPLAEGQQVGTVKIVADGK 403


>gi|309702334|emb|CBJ01656.1| penicillin-binding protein 6B [Escherichia coli ETEC H10407]
          Length = 388

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|332874743|ref|ZP_08442613.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6014059]
 gi|332737004|gb|EGJ67961.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6014059]
          Length = 397

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 22  IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 82  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 141

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 142 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 201

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 202 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 261

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISE 294
           +VI G    + R   + +LL+ GF N          + +      F ++N        + 
Sbjct: 262 SVIFGTPSMSERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKENEVQVGLAENF 321

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+    +        +K  ++   +
Sbjct: 322 NVTMPKGKADGIKTQLVVQPNLS---APLQKGQVVGKLV 357


>gi|161613330|ref|YP_001587295.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362694|gb|ABX66462.1| hypothetical protein SPAB_01041 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 388

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 90/351 (25%), Positives = 154/351 (43%), Gaps = 22/351 (6%)

Query: 1   MRQFLVI--------IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L I        ++ A+ ++   F           + L+D  TG V+         N
Sbjct: 1   MKRRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGLQNFATVQILHSGKKVGSERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
             +         ++      +    + + K     K+ E+     +++  +
Sbjct: 301 YGDKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 351


>gi|332857068|ref|ZP_08436374.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013150]
 gi|332870006|ref|ZP_08438982.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013113]
 gi|332726883|gb|EGJ58397.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013150]
 gi|332732506|gb|EGJ63757.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013113]
          Length = 397

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 22  IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 82  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 141

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 142 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 201

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 202 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 261

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISE 294
           +VI G    + R   + +LL+ GF N          + +      F ++N        + 
Sbjct: 262 SVIFGTPSMSERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKENEVQVGLAENF 321

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     + +     +K  ++   +
Sbjct: 322 NVTMPKGKADGIKTQLVV---QPNLNAPLQKGQVVGKLV 357


>gi|332162265|ref|YP_004298842.1| D-alanyl-D-alanine carboxypeptidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606331|emb|CBY27829.1| D-alanyl-D-alanine carboxypeptidase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666495|gb|ADZ43139.1| D-alanyl-D-alanine carboxypeptidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 396

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 152/346 (43%), Gaps = 14/346 (4%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++      ++ +A+          A       Y L+D N+G V+AE   D   +PASLT
Sbjct: 9   LKKLTFSAGLLLLALPYAHAADSPAAPAIDAKAYVLMDYNSGKVLAEGNSDQRLDPASLT 68

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A                K G  + L +  K +
Sbjct: 69  KIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATGNPALRGSSLMFLKPGDQVKLSDLNKGI 128

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MNN +K LGL+ T+FM  HG+   G Y+TA DMA
Sbjct: 129 VIQSGNDASIALADYIAGSQDSFVGLMNNYAKALGLNNTNFMTVHGLDAPGQYSTAHDMA 188

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +L   +  D P      + K       +  N N     T L  DGMKTGFT  +G N+VA
Sbjct: 189 VLGQALIRDVPDEYALHKEKEFTFNKIRQINRNRLLWSTNLNVDGMKTGFTAGAGHNLVA 248

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LL+ GF        I           +  +  
Sbjct: 249 SATDGPMRLISVVLGAPSDRVRFSESEKLLTWGFRFYETVVPIKATKPFVAQKVWFGDTG 308

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++E+   T  +    N +     ++        K  ++   
Sbjct: 309 QAELGVAEDAAITIPKGQMKNLKASYKLNETELRAPLAKHQVVGTI 354


>gi|260549716|ref|ZP_05823933.1| penicillin-binding protein 6 [Acinetobacter sp. RUH2624]
 gi|260407233|gb|EEX00709.1| penicillin-binding protein 6 [Acinetobacter sp. RUH2624]
          Length = 382

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A     S           T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGELTENEKVRMNESAWCKGSSAESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T FMN+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHLMNQEAKRIGMTNTQFMNSTGLPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSRYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE-- 294
           +VI G    N R   + +LLS GF N                  +    +     ++E  
Sbjct: 247 SVIFGTDSVNERANQTRALLSWGFANFETANVQPANQVLAKAKVWFGKENEVQIGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     + +     +K  ++   +
Sbjct: 307 NVTMPKGKAGGIKTQLVV---QPNLNAPLQKGQVVGKLV 342


>gi|311280276|ref|YP_003942507.1| Beta-lactamase [Enterobacter cloacae SCF1]
 gi|308749471|gb|ADO49223.1| Beta-lactamase [Enterobacter cloacae SCF1]
          Length = 402

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 11/337 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +A A+ +     +          + L+D  +G V++E   D   +PASLTK+MT+YVV 
Sbjct: 20  FVAPAVQAAEQVQMPAPPPVDAKAWILMDYASGKVLSEGSADEKLDPASLTKIMTSYVVG 79

Query: 67  SFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDIA 120
             LK  K  LT  +TI ++A                K G  +++++  K +I++S ND +
Sbjct: 80  QALKAGKIKLTDSVTIGRDAWATGNPALRGSSVMFLKPGDQVSVEDLNKGVIIQSGNDAS 139

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AIA+ +  ++  FV  MN+ ++ LGL+ T F   HG+   G ++TARDMA+L+  +  D
Sbjct: 140 IAIADYVAGSQDSFVGLMNSYAQKLGLTNTTFQTVHGLDAPGQFSTARDMALLTRAMIHD 199

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P      + K       + PN N       L ADG+KTG T  +G+N+V+SAIQGD  L
Sbjct: 200 VPDEYAIHKEKEFTFNKIRQPNRNRLLWNASLNADGVKTGTTAGAGYNLVSSAIQGDMRL 259

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE 295
           IAV+LG      R   S  LL+ GF        I      + +  +  + S       E 
Sbjct: 260 IAVVLGTKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVEQRVWYGDASQAKLGAGEA 319

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              T       N +     ++        K  ++   
Sbjct: 320 GSITLPRGQLKNLKASYTLNETQLTAPLAKGQVVGTI 356


>gi|253688070|ref|YP_003017260.1| Beta-lactamase [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754648|gb|ACT12724.1| Beta-lactamase [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 401

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                 +          + L+D ++G V+AE+  D   +PASLTK+M +YV+   +K  K
Sbjct: 26  FTYAEQMPAVPQIDAKAFILMDYHSGKVLAESNADERLDPASLTKIMASYVIGQAIKSGK 85

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +T+ K+A                K G  + +    K ++++S ND ++A+A+ +
Sbjct: 86  ISPTDEVTVGKDAWATGNPALRGSSLMFLKPGDRIPVSELNKGIVIQSGNDASIALADYV 145

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K L L+ THF+  HG+   G Y+TARDMA+L   +  D P+    
Sbjct: 146 AGSQDAFVSLMNNYVKALNLTNTHFLTVHGLDATGQYSTARDMALLGQALIRDVPEEYAL 205

Query: 188 FQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            + K       + PN N     T L  DG+KTG T  +G N+VASA +G+  LI+V+LGA
Sbjct: 206 HKEKEFTFNNIRQPNRNRLLWSTNLNVDGVKTGHTNGAGHNLVASATEGNMRLISVVLGA 265

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKE 302
                R + S  LL+ GF        I        +  +     +    ++++   T  +
Sbjct: 266 QTDAIRFRESEKLLTWGFRFFETVTPIKADAPFTTQRVWFGTEKDARLGVAQDAALTIPK 325

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               N +     ++        K  ++   
Sbjct: 326 GQMKNLKASFTLNQPQLSAPLTKNQVVGTI 355


>gi|229526111|ref|ZP_04415515.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae bv. albensis
           VL426]
 gi|229336269|gb|EEO01287.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae bv. albensis
           VL426]
          Length = 389

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 17/344 (4%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHAGDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           L   I  D P+    +        G    N N       +  DGMKTG+T  +G+++ +S
Sbjct: 185 LGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASS 244

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNE 288
           A  G+  LI+V++G+    +R   S  LLS GF              I          NE
Sbjct: 245 ATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDSVIQNQRLWYGDKNE 304

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V   S +   +   + ++   N  ++  K+ E+     + +  +
Sbjct: 305 VALGSADTVYLTLPRSDVKKLNAVIQLDKNLEAPIAKGDVVGSI 348


>gi|145298088|ref|YP_001140929.1| Serine-type D-Ala-D-Ala carboxypeptidase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850860|gb|ABO89181.1| Serine-type D-Ala-D-Ala carboxypeptidase [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 396

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 99/354 (27%), Positives = 150/354 (42%), Gaps = 25/354 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENY 46
           M +F   + +A L +                     A       + L+D  +G V+AE  
Sbjct: 1   MSKFARSVILASLISATAQANTPVPTPNAAPMVVPAAPEISAKAHILIDYYSGQVLAEAN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMT 103
            D    PASLTK+MT+Y++   L E     T  +TISKNA        S    + G  ++
Sbjct: 61  ADERLPPASLTKMMTSYIIGHELLEGNIKNTDMVTISKNAWSKNYTDSSKMFIEVGKQVS 120

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +D+  K +I++S ND  VA+AE L  +   F   MN  S  LG+  T F N HG+ + GH
Sbjct: 121 VDDLNKGIIIQSGNDACVAMAEFLAGSTDSFASLMNAWSAKLGMKDTQFKNPHGLDEEGH 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTC 222
           Y+TARDMA L   +  D P+    +  K     G    N N       L  DG+KTG   
Sbjct: 181 YSTARDMARLGQALIHDQPEEYKIYAQKSFVFNGITQHNRNRLLWDQSLQVDGIKTGHVS 240

Query: 223 ASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             G+N+V+SA       LIAV+LGA    +R   S  LL+ GF             +   
Sbjct: 241 QVGYNLVSSATNNEGMRLIAVVLGASSEGSRAAESKKLLTYGFRFFQSLTPYKAGTELVT 300

Query: 282 QQNLSNEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           Q+    + P +         V  T+ +  N     +   + ++     +++  +
Sbjct: 301 QKIWMGDKPEVKLGVDKDVSVLVTRGQGNNLKADFQLESELKAPLAKGQRVGTV 354


>gi|188582286|ref|YP_001925731.1| serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium populi
           BJ001]
 gi|179345784|gb|ACB81196.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium populi
           BJ001]
          Length = 418

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 8/336 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   +  +    P  +        +  L+D  +G V+ E   D P++PAS+ KLMTA +
Sbjct: 16  MLAAVLNAVLPPAPARAQTFQTAAAHAILVDAESGSVLFEKAADEPFSPASMAKLMTAEI 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  +KE +  + T  T++++A     +     +   +  S + L + L+ LIV+S ND 
Sbjct: 76  VFRAIKEGRLSMDTEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ IAE++  TE+ F   MN  +K +GL+ + F NA G        TARDMA ++  +  
Sbjct: 136 AITIAENMAGTEEAFAGMMNQRAKEIGLTRSTFRNATGYSAPDQKVTARDMARIAQHLID 195

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            +P++   +  +       K  N N  +   +GADG+KTG+   SG+ +  SA+Q  Q L
Sbjct: 196 SYPEFYKIYSEREFTWNKIKQQNRNPLLTLDIGADGLKTGYLEESGYALTGSAVQNGQRL 255

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEV 296
           I V+ G      R   S  ++  GF     R+                    VP ++ + 
Sbjct: 256 IMVVSGLKTARDRAAESRKMMEWGFRAFEPRQVFAANEPVADVSVFGGEKGSVPVVANKP 315

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                     +    +   +       E+   +   
Sbjct: 316 VRLLLPRGTSDRVTAKVVYQGPLVAPVEQGREVGRL 351


>gi|126698888|ref|YP_001087785.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile 630]
 gi|254974836|ref|ZP_05271308.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile QCD-66c26]
 gi|255092224|ref|ZP_05321702.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile CIP 107932]
 gi|255306248|ref|ZP_05350420.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile ATCC 43255]
 gi|255313963|ref|ZP_05355546.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile QCD-76w55]
 gi|255516643|ref|ZP_05384319.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile QCD-97b34]
 gi|255649742|ref|ZP_05396644.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile QCD-37x79]
 gi|260682898|ref|YP_003214183.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CD196]
 gi|260686496|ref|YP_003217629.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
 gi|306519851|ref|ZP_07406198.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-32g58]
 gi|115250325|emb|CAJ68147.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile]
 gi|260209061|emb|CBA62190.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile CD196]
 gi|260212512|emb|CBE03449.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Clostridium difficile R20291]
          Length = 387

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 18/350 (5%)

Query: 1   MRQFL-----VIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++       ++IA+  LS  F        +           L+D  +G ++ E      
Sbjct: 1   MKKLASTALAILIALTPLSFSFANNKENADANQLNISSKSAILMDVGSGQILYEKDAHKK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS+TK+MT  ++   L   K  L   + +S+ AS    S    + G T  +D  LK 
Sbjct: 61  LPPASVTKVMTMLLIVEALDSGKIKLDDEVQVSETASSMGGSQIFLEPGETQKVDTLLKG 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + V SAND  VA+AE L  + + FV  MN  +K L ++ THF N +G+    HYT+A D+
Sbjct: 121 IAVASANDACVAMAEHLAGSVEGFVDRMNAKAKELNMNDTHFANTNGLPVANHYTSAHDI 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASG 225
           A++S  +        +        + GKK       NTN  +  + GA G+KTGFT  + 
Sbjct: 181 ALMSRELLKHEMISKYLTTWMDKVVVGKKQVTVGLANTNKLIKHYQGATGVKTGFTQEAK 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--- 282
           + + ASA +G+  L+A  LGA     R   ++SLL+ GF N    K  +           
Sbjct: 241 YCLSASAKRGNTHLVAATLGAETSPERFNDASSLLNYGFANYESVKLCSKGDNIATLTLD 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +   N+V  +++E      +  +     K+ +  ++  +  +K T+L   
Sbjct: 301 KADENKVKLVAKEDLNALIKKGSSKEFEKKIEIVKNPKMPIKKGTVLGKI 350


>gi|221211096|ref|ZP_03584075.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD1]
 gi|221168457|gb|EEE00925.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD1]
          Length = 438

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 15/338 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK
Sbjct: 67  ATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKK 126

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 127 ISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 186

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN+ ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY   F  K
Sbjct: 187 AQFVTMMNDEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEK 246

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
             +    +  N N  +      DG+KTG T A+GF +++SA +         + L+AV++
Sbjct: 247 EFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGFCLISSAKRPIPGASDAQRRLVAVMM 306

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +     ++ +  V  
Sbjct: 307 GEPKESDRTQDSMKMLNYGYSAFDAVRLFKGGQAISTPRLYKGKENTVQVGVASDQWVTV 366

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +        ++       +     +++  +K     K
Sbjct: 367 PRGLGDKVKPEVDVNAPLIAPLAQGQQVGTVKVVADGK 404


>gi|123441794|ref|YP_001005778.1| D-alanyl-D-alanine carboxypeptidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088755|emb|CAL11560.1| D-alanyl-D-alanine carboxypeptidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 405

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 14/346 (4%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++      ++ +A+          A       Y L+D N+G V+AE   D   +PASLT
Sbjct: 18  LKKLTFSAGLLLLALPYAHAADSPAAPAIDAKAYVLMDYNSGKVLAEGNSDQRLDPASLT 77

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A     S          K G  + L +  K +
Sbjct: 78  KIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATGNSALRGSSLMFLKPGDQVKLSDLNKGI 137

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MNN +K LGL+ THFM  HG+   G Y+TA DMA
Sbjct: 138 VIQSGNDASIALADYIAGSQDSFVGLMNNYAKALGLNNTHFMTVHGLDAPGQYSTAHDMA 197

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +L   +  D P      + K       +  N N     T L  DGMKTGFT  +G N+VA
Sbjct: 198 VLGQALIRDVPDEYALHKEKEFTFNKIRQINRNRLLWSTNLNVDGMKTGFTAGAGHNLVA 257

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LL+ GF        I           +  +  
Sbjct: 258 SATDGPMRLISVVLGAPSDRVRFSESEKLLTWGFRFYETVVPIKATKPFVTQKVWFGDTG 317

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++E+   T  +    N +     ++        K  ++   
Sbjct: 318 QAELGVAEDAAITIPKGQMKNLKASYKLNETELRAPLAKHQVVGTI 363


>gi|59711352|ref|YP_204128.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Vibrio fischeri ES114]
 gi|197335666|ref|YP_002155507.1| D-alanyl-D-alanine carboxypeptidase DacC [Vibrio fischeri MJ11]
 gi|59479453|gb|AAW85240.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Vibrio fischeri ES114]
 gi|197317156|gb|ACH66603.1| D-alanyl-D-alanine carboxypeptidase DacC [Vibrio fischeri MJ11]
          Length = 391

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/346 (26%), Positives = 151/346 (43%), Gaps = 12/346 (3%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++ ++   I+   +       +  A       Y L+D ++G V+AE   +   NPASLT
Sbjct: 8   LKRLILSSFILGSTVAVAAPAVIPNAPQIAAKGYVLMDYHSGKVLAEKDMNVRMNPASLT 67

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVK 114
           K+MT+YV+   ++     +   + ISKNA        S    + GST+ +    K +I++
Sbjct: 68  KMMTSYVIGQEIESGNISMDDDVVISKNAWAKNFPGSSKMFIEVGSTVKVRELNKGIIIQ 127

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  VA+AE +  +E  FV  MN  +K L L  THF N HG+ +   Y+T  DMA++ 
Sbjct: 128 SGNDACVAMAEHVAGSEDAFVDLMNAWAKTLNLKNTHFANVHGLDRDDLYSTPYDMALIG 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAI 233
             +  D P+    +  K     G    N N       +  DG+KTG T  +GFN+V+SA 
Sbjct: 188 QALIRDVPEEYRVYSEKSFTYNGITQYNRNGLLWDKSMNVDGIKTGHTNGAGFNLVSSAT 247

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEV 289
           +G   L+AV++G    N R   S  LL+ GF               + +  +  +     
Sbjct: 248 EGKMRLVAVVMGTKSGNARKAESKKLLNYGFRFFETVSPHKANETFVTEKVWMGSTDEVA 307

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             ++E+   T               +K +      K  ++     +
Sbjct: 308 LGVAEDTYVTLPRGQAKKMTASFVLEK-TLEAPIYKGDVVGKLYYQ 352


>gi|330445206|ref|ZP_08308858.1| D-alanyl-D-alanine carboxypeptidase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489397|dbj|GAA03355.1| D-alanyl-D-alanine carboxypeptidase family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 391

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 10/341 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            ++A A ++     +  A       Y L+D N+G ++A +       PASLTK+MT+YV+
Sbjct: 16  TLLASATVAASPAVVPEAPQIAAKGYILVDYNSGKILAGHNEYEKLAPASLTKMMTSYVI 75

Query: 66  FSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K         + +SKNA        S    + G T+ + +  + +IV S ND  VA
Sbjct: 76  GQEIKNGNISPDDTVVVSKNAWAKNFPGSSKMFLEVGKTVKVSDLNRGIIVDSGNDACVA 135

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +++ FV  MN  +KNLG+ +THF N HG+ +   YTT  D++IL+  + +D P
Sbjct: 136 MAEHIAGSQESFVDLMNGWAKNLGMKSTHFANVHGLDRSDLYTTPYDLSILARHLISDLP 195

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +  K     G    N N       +  DG+KTG T  +G+++V++A +G+  L+A
Sbjct: 196 NEFKIYSEKSFTYNGITQYNRNGLLWDKSMHVDGLKTGHTDNAGYSLVSTATEGNMRLVA 255

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE-- 295
           V++G   +N R   S  LL+ GF                 +  +  +       ++E   
Sbjct: 256 VVMGTASKNARLAESKKLLNFGFRFYETLSPNKKDQTIETEKVWMGDTDTVNLGVAENTY 315

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           V   + +  +        K+ ++     E++  L   +  K
Sbjct: 316 VTLPRSQAKDLKASFVLTKELKAPITKGEEVGTLTYSLGDK 356


>gi|168790220|ref|ZP_02815227.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC869]
 gi|195939526|ref|ZP_03084908.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|254793720|ref|YP_003078557.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261226456|ref|ZP_05940737.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|189370276|gb|EDU88692.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC869]
 gi|226237417|dbj|BAH46939.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli O55:H7]
 gi|254593120|gb|ACT72481.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli O157:H7 str. TW14359]
 gi|320188186|gb|EFW62850.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320641418|gb|EFX10862.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320646787|gb|EFX15664.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H- str.
           493-89]
 gi|320652066|gb|EFX20409.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H- str.
           H 2687]
 gi|320657428|gb|EFX25226.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320663244|gb|EFX30549.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|260777069|ref|ZP_05885963.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606735|gb|EEX33009.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 394

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 10/334 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++  + + S        A       Y ++D ++G V+A   PD P  PASLTKLMTAYVV
Sbjct: 10  LLCTLVVASAEAVITPDAPQINAKGYVVMDYHSGQVVASQNPDTPLAPASLTKLMTAYVV 69

Query: 66  FSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +   +       TIS+NA       PS    K G  +++ N +  +IV+S ND +VA
Sbjct: 70  GQEINAGRLSWDDKATISRNAWSVNFPEPSKMFIKPGDEISIRNLMLGVIVQSGNDASVA 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  FV  MN  ++ LG+  T F+NAHG+      TT +DMA L   I  D P
Sbjct: 130 LAEHVAGSESAFVSLMNGWTQTLGMENTQFINAHGLDGDNIQTTPKDMANLMRAIIKDVP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +    +Q K       +  N N       L  DG KTG+T  +G+++V+SA +G   LI+
Sbjct: 190 EVYKLYQEKKFTWNDIEQYNRNKLLWDRSLNVDGGKTGYTENAGYSLVSSATEGRMRLIS 249

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVC 297
           V++G   +  R   S +LL  GF      +             ++    N    ++E V 
Sbjct: 250 VVMGTPSQQARTSASRNLLGYGFRFFDTVQVAKKDEVIMQSRVWKGAEENVPVTVAETVY 309

Query: 298 T--TQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
               +    +   ++      ++     + +  +
Sbjct: 310 LTFPRAMKDSLKQEVVVESQLQAPIAAGDSLGQV 343


>gi|74316665|ref|YP_314405.1| serine-type D-ala-D-ala-carboxypeptidase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74056160|gb|AAZ96600.1| serine-type D-ala-D-ala-carboxypeptidase [Thiobacillus
           denitrificans ATCC 25259]
          Length = 402

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 4/310 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + L+D  +G V+ ++       PASLTKLMT++V    L+  +      +TIS+
Sbjct: 48  ELAAKSWVLMDAASGSVLVDHRGRERLPPASLTKLMTSHVAALELQRGRIKENDLVTISE 107

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    + G+ + + + L+ +IV+S ND ++A+AE L   E  F   MN  +K 
Sbjct: 108 KAWRMGGSKMFVRVGNQVAVHDLLRGIIVQSGNDASIALAEHLAGGEDTFAALMNQEAKR 167

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LGL+ THF+NA G    GHY++A DMA L+  I  + P +   +  K     G K PN N
Sbjct: 168 LGLADTHFVNATGWPAEGHYSSALDMAKLARAIIIEDPAHYGLYAEKEFVWNGIKQPNRN 227

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +      DG+KTG T  +G+ +VAS+ +  Q +IA + G      R   +A LL+ GF
Sbjct: 228 LLLWRDPSVDGLKTGHTEEAGYCLVASSQRDGQRMIAAVFGTESEAARATETAKLLAYGF 287

Query: 265 YNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                +            + ++         ++ +      +  +   + +     +   
Sbjct: 288 NFFDSKTFFKKGQAVQTVEVWKGAARTLKAGVAADFAAVLPKRTSGEFKTRTVVTSDPLV 347

Query: 321 IDFEKITLLK 330
              +    L 
Sbjct: 348 APVKAGAPLG 357


>gi|325122968|gb|ADY82491.1| D-ala-D-ala-carboxypeptidase [Acinetobacter calcoaceticus PHEA-2]
          Length = 382

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 8/337 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G+  T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMVNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEV 296
           +VI G    + R   + +LL+ GF N                  +          ++E  
Sbjct: 247 SVIFGTPSMSERADQTRTLLAWGFANFETANVQPANQVLAKAKVWFGKEDEVQVGLAENF 306

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             T  +    +    +   + +     +K  ++   +
Sbjct: 307 SVTMPKG-KADGIKTQLVVQPNLNAPLQKGQVVGKLV 342


>gi|218558891|ref|YP_002391804.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli S88]
 gi|218365660|emb|CAR03397.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli S88]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF       +   + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPQIQAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|52425884|ref|YP_089021.1| DacC protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307936|gb|AAU38436.1| DacC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 394

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 16/351 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +++  + I   +L+      +                Y ++D N+G V+A   PD    P
Sbjct: 6   LKKTSLAIFAGLLALPLTVSAEDVNFGIVPPQVNAQTYVVMDYNSGAVLASLNPDQRQYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITI---SKNASEYPPSNSTFKKGSTMTLDNALKL 110
           ASLTK+MT+YV+   LK+ K   T  IT+   S   +    S         +T++   + 
Sbjct: 66  ASLTKMMTSYVIGDALKQGKIHNTDTITVGESSWGKNFPDSSKMFLNLNQQVTVEQLNRG 125

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +I+ S ND  VA+AE +  T   F+  MN  ++  GL  THF   HG+     Y++ARDM
Sbjct: 126 IIIVSGNDACVAMAEHVSGTTDNFINSMNKYAEQFGLKNTHFTTVHGLDDANQYSSARDM 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIV 229
           AI+   I  D P+    +  K       K PN N       +  DGMKTG T  +G+N+V
Sbjct: 186 AIIGAHIIRDLPEEYKIYAEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLV 245

Query: 230 ASAIQ-GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQN 284
           ASA    +  LI V++G      R   S  LL   F +    K +        +D Y  N
Sbjct: 246 ASATNADNMRLITVVMGVPTYKGREVESKKLLQWAFNSFDTFKTLEAGKAVTNQDIYYGN 305

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                  + ++   T  +  N + + +   DK+       K  ++   I +
Sbjct: 306 QGKVQIGVLQDRFITVPKGRNADLKARFELDKKYLEAPLAKGQVVGKVIYQ 356


>gi|322832952|ref|YP_004212979.1| Beta-lactamase [Rahnella sp. Y9602]
 gi|321168153|gb|ADW73852.1| Beta-lactamase [Rahnella sp. Y9602]
          Length = 389

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 158/352 (44%), Gaps = 20/352 (5%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSI--------AETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  + +++  ++ +     +I          +     + L+D  +G V+A   PD   
Sbjct: 1   MKRSVMSVLSCVLMFSAGSAKAIAPLDFPVVPPSIDAASFVLMDYASGDVLAAGNPDERR 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           NPASLTKLMT YV+   L  KK  +   +T+ + A      +         K G  +T+ 
Sbjct: 61  NPASLTKLMTGYVIDRALDHKKITMDDVVTVPQEAWVAGNKSLAGSSLMFLKPGDHVTVR 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + ++ +I+ S ND  VA+A+ +  ++  FV  MN    ++GL+ THF   HG+   G YT
Sbjct: 121 DLIRGIIITSGNDACVAMADYVAGSQDSFVGMMNQYVVSMGLTNTHFETVHGLDAPGQYT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           T+ D+A LS  I    P+  H +  K L        N N       L  DG+KTG T ++
Sbjct: 181 TSYDLAKLSRAIIGGEPEEYHMYAEKSLTYDNITQQNRNGLLWDKNLQVDGLKTGHTESA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           GFNI+ASA QGD+ LIAV++G      R + +  LL+ GF   T ++  N       +  
Sbjct: 241 GFNIIASATQGDRRLIAVVMGGKSSKGREEQARKLLTWGFREYTSKQIFNADQTVSSEHV 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    +        +V  +  +      + +    +       +K   L + 
Sbjct: 301 WFGANAQVKVGSLSDVFISVPQADADKLKAQYVLTRPQIDAPLKKGQELGSI 352


>gi|226331025|ref|ZP_03806543.1| hypothetical protein PROPEN_04955 [Proteus penneri ATCC 35198]
 gi|225201820|gb|EEG84174.1| hypothetical protein PROPEN_04955 [Proteus penneri ATCC 35198]
          Length = 367

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/324 (26%), Positives = 141/324 (43%), Gaps = 11/324 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +    + +   Y L+D N+G V+AE   D   +PASLTK+MT+YV+   ++  K   +  
Sbjct: 2   IPAVPSIEAESYILIDYNSGKVLAEMNADVRRDPASLTKMMTSYVIGQSIRAGKISNSDI 61

Query: 80  ITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           + I + A                K G  +T+    + + ++S ND  VA+A  +  ++  
Sbjct: 62  VPIGEEAWATGNPIFRGSSLMFLKPGDQVTVAQLTRGINLQSGNDACVAMASYVAGSQDT 121

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN+  K LGL  T F   HG+   G Y+TARDMA++   +  D P     ++ K  
Sbjct: 122 FVAMMNDYVKRLGLQNTQFQTVHGLDAPGQYSTARDMALIGAALIRDVPDEYAIYKEKEY 181

Query: 194 EIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                +  N N     T L  DG+KTG T ++G+N+VASA +G+  LI+ ++G      R
Sbjct: 182 TYNNIRQTNRNGLLWDTSLNVDGIKTGHTASAGYNLVASATEGNMRLISAVMGGHSPKGR 241

Query: 253 NKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
           +  S  LL+ GF      K +        +  +          + ++V  T       + 
Sbjct: 242 DVESKKLLTWGFRFFETVKPLQVGKEFAAEPIWYGETDKVQLGVDKDVYLTIPRGRLKDL 301

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
           +     D         K  ++   
Sbjct: 302 KASYVLDNVELHAPVTKNQVVGTI 325


>gi|161523591|ref|YP_001578603.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia multivorans
           ATCC 17616]
 gi|221199887|ref|ZP_03572930.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans
           CGD2M]
 gi|221207444|ref|ZP_03580453.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD2]
 gi|160341020|gb|ABX14106.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia multivorans
           ATCC 17616]
 gi|221172647|gb|EEE05085.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans CGD2]
 gi|221180126|gb|EEE12530.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans
           CGD2M]
          Length = 438

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 15/338 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK
Sbjct: 67  ATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKK 126

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 127 ISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 186

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN+ ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY   F  K
Sbjct: 187 AQFVTMMNDEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEK 246

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
             +    +  N N  +      DG+KTG T A+GF +++SA +         + L+AV++
Sbjct: 247 EFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGFCLISSAKRPIPGASDAQRRLVAVMM 306

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +     ++ +  V  
Sbjct: 307 GEPKESDRTQDSMKMLNYGYSAFDAVRLFKGGQAISTPRLYKGKENTVQVGVASDQWVTV 366

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +        ++       +     +++  +K     K
Sbjct: 367 PRGLGDKVKPEVDVNAPLIAPLAQGQQVGTVKVVADGK 404


>gi|114775714|ref|ZP_01451282.1| hypothetical protein SPV1_05278 [Mariprofundus ferrooxydans PV-1]
 gi|114553825|gb|EAU56206.1| hypothetical protein SPV1_05278 [Mariprofundus ferrooxydans PV-1]
          Length = 334

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 3/294 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+        +       + ++D  +G +IA +  D    PASLTK+MT Y+ F  LK+ 
Sbjct: 25  LAVHAAAWPESPRLDAKAWAMIDARSGQIIASHNADEQLPPASLTKMMTLYLAFEALKQG 84

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L TP+++S+ A +   S          T+   +  +   S ND  +A+AE +  +E 
Sbjct: 85  RLSLDTPVSVSQKAWKIGGSTMFLDPRMHPTVGQLIHGIATYSGNDACIALAEHMEGSES 144

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F + MN  ++ LG+  +HF+NA G    GHY++A DMAIL   +  DFP+    F  + 
Sbjct: 145 TFAERMNAKARELGMLHSHFVNATGFPTEGHYSSAGDMAILGAALWRDFPERYKLFDERD 204

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G+  PN N  + T   ADG+KTG T  +G+ +V SA + +   +A + G      R
Sbjct: 205 FTYDGRTQPNRNRLLWTMSEADGIKTGHTQEAGYCLVGSAEKANTRFVAAVFGTKSDRAR 264

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEI 303
            + + +LL  GF +   ++     I+   + ++    +     + +V  T  + 
Sbjct: 265 AQETRTLLRFGFNHFVTKRPAEREIRRQVEVFEGTEDHVWLRPASDVWVTVPKG 318


>gi|172061846|ref|YP_001809498.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           MC40-6]
 gi|171994363|gb|ACB65282.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           MC40-6]
          Length = 437

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 14/336 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 62  FTGAPATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 121

Query: 69  LKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   IT S+         S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 122 LDKKKISMEQIITPSEAVRRVGLDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 181

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 182 VGGSEGQFVTLMNAEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYG 241

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 242 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 301

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G      R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 302 SVMMGEPKEGERTQDSMKMLNYGYSAFDAVRLFKGGQAMSTPRVYKGKENTVQVGVKSDQ 361

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            V   +        ++       +   + +++  +K
Sbjct: 362 WVTVPRGLGDKVKPEVDVNAPLIAPLAEGQQVGTVK 397


>gi|328469382|gb|EGF40328.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus 10329]
          Length = 385

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    ++ ++  +  +             +   Y L+D  +G +IAE+       PASL
Sbjct: 1   MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I +D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGQVESKVRVWKGNTNQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       +   +   + K
Sbjct: 301 EAIFAKDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|149909670|ref|ZP_01898322.1| D-alanyl-D-alanine serine-type carboxypeptidase [Moritella sp.
           PE36]
 gi|149807184|gb|EDM67139.1| D-alanyl-D-alanine serine-type carboxypeptidase [Moritella sp.
           PE36]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/341 (29%), Positives = 154/341 (45%), Gaps = 13/341 (3%)

Query: 2   RQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++ ++    +A   LS     +          + L+D ++G VIAE   D    PASLTK
Sbjct: 6   KKLILTSLAMASFSLSAAPSVIPDTPVVAAKAFILIDFDSGKVIAEKNADDSLKPASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   ++     L   +TISKNA        S    + G T+T++   + +IV+S
Sbjct: 66  MMTSYVIGQEIRSGNINLDDQVTISKNAWAKNFPDSSKMFIEVGKTITVEKLNQGIIVQS 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  F Q MN+ SK LG+ ATHF N+HG+     YTTARDMA L  
Sbjct: 126 GNDACVAMAEYIAGTEGAFAQLMNSWSKQLGMDATHFANSHGLDSKDQYTTARDMATLGQ 185

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G    N N       +  DG+KTG T  +G+N+V+SA +
Sbjct: 186 ALIRDVPEEYRIYSQKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATK 245

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
            +  L+AV+LG    + R   S  LL+ GF                 ++    E   I  
Sbjct: 246 DNMRLVAVVLGTKSADARKAESKKLLNFGFRFYETVTLHEANSSIVAERVWMGEQEQIEL 305

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                  +   + +  N     +  K+  +     + +  +
Sbjct: 306 GLANKLTLTVPRGQAKNLTADFEIQKELSAPIAKGDIVGKV 346


>gi|169795187|ref|YP_001712980.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter baumannii AYE]
 gi|213158149|ref|YP_002320200.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Acinetobacter baumannii AB0057]
 gi|215482735|ref|YP_002324933.1| Penicillin-binding protein 6 precursor [Acinetobacter baumannii
           AB307-0294]
 gi|239501150|ref|ZP_04660460.1| Penicillin-binding protein 6 precursor [Acinetobacter baumannii
           AB900]
 gi|260556667|ref|ZP_05828885.1| penicillin-binding protein 6 [Acinetobacter baumannii ATCC 19606]
 gi|301346852|ref|ZP_07227593.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter baumannii AB056]
 gi|301511131|ref|ZP_07236368.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter baumannii AB058]
 gi|301596416|ref|ZP_07241424.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter baumannii AB059]
 gi|169148114|emb|CAM85977.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter baumannii AYE]
 gi|193077945|gb|ABO12853.2| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter baumannii ATCC 17978]
 gi|213057309|gb|ACJ42211.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Acinetobacter baumannii AB0057]
 gi|213987778|gb|ACJ58077.1| Penicillin-binding protein 6 precursor [Acinetobacter baumannii
           AB307-0294]
 gi|260409926|gb|EEX03226.1| penicillin-binding protein 6 [Acinetobacter baumannii ATCC 19606]
          Length = 382

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISE 294
           +VI G    + R   + +LL+ GF N          + +      F ++N        + 
Sbjct: 247 SVIFGTPSMSERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKENEVQVGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     + +     +K  ++   +
Sbjct: 307 NVTMPKGKADGIKTQLVV---QPNLNAPLQKGQVVGKLV 342


>gi|153839337|ref|ZP_01992004.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus
           AQ3810]
 gi|149747147|gb|EDM58135.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus
           AQ3810]
          Length = 385

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    ++ ++  +  +             +   Y L+D  +G +IAE+       PASL
Sbjct: 1   MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I +D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGQVESKVRVWKGNTNQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       +   +   + K
Sbjct: 301 EAIFAKDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|260855992|ref|YP_003229883.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O26:H11 str.
           11368]
 gi|257754641|dbj|BAI26143.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O26:H11 str.
           11368]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 155/351 (44%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRTIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I  D P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHDEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|323977820|gb|EGB72906.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TW10509]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R   +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREDEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|317405763|gb|EFV86054.1| penicillin-binding protein [Achromobacter xylosoxidans C54]
          Length = 385

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 96/349 (27%), Positives = 154/349 (44%), Gaps = 13/349 (3%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++    +++A A +S                + LLD  +G VIA +       PASLTK
Sbjct: 3   MKKLAASLLVATACMSGALAQSMPQPDLSAKAWLLLDETSGQVIASHAATARIEPASLTK 62

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSA 116
           +MTAYVVF  +  K+      + IS  A + PP  S    + GS +++D  L+ L+++S 
Sbjct: 63  IMTAYVVFGAIHNKELSPDQKVVISTRAWKVPPGSSKMFLEPGSRVSVDQLLRGLMIQSG 122

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+A+AE++  + + FV  MN+T+  LGL  THF + HG+   G Y+T  D++IL+ R
Sbjct: 123 NDAAIALAEAVSGSVEAFVARMNDTAVQLGLHGTHFASPHGLPDPGTYSTVSDLSILATR 182

Query: 177 IKTDFPQYMH-YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
              D+PQ    Y   K         PN N  +      DG+KTG T A+G+ IVA+A + 
Sbjct: 183 FIRDYPQLYKTYDSAKTYTYNNITQPNRNRLLWLDPSVDGLKTGHTDAAGYCIVATAHRP 242

Query: 236 D----QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSN 287
           +    + LI V++G      R + S  LL  GF      K           + ++     
Sbjct: 243 NGKEQRRLITVVVGTASDKLRTQESRELLEWGFQGFNTIKLYAKGQAVATPEVWKGQADT 302

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                + +   T                  +       +  ++  +  K
Sbjct: 303 LKAGFARDAYVTVPAGAKVEPVWTPQDPLVAPIPAQATVGSVRVMVDGK 351


>gi|184158962|ref|YP_001847301.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii ACICU]
 gi|183210556|gb|ACC57954.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii ACICU]
 gi|322508944|gb|ADX04398.1| dacC [Acinetobacter baumannii 1656-2]
 gi|323518930|gb|ADX93311.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 382

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISE 294
           +VI G    + R   + +LL+ GF N          + +      F ++N        + 
Sbjct: 247 SVIFGTPSMSERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKENEVQVGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+    +        +K  ++   +
Sbjct: 307 NVTMPKGKADGIKTQLVVQPNLS---APLQKGQVVGKLV 342


>gi|170019661|ref|YP_001724615.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli ATCC 8739]
 gi|169754589|gb|ACA77288.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli ATCC
           8739]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N  +    +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDNTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|110642224|ref|YP_669954.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli 536]
 gi|191170002|ref|ZP_03031556.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli F11]
 gi|227887061|ref|ZP_04004866.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli 83972]
 gi|110343816|gb|ABG70053.1| penicillin-binding protein 6B precursor [Escherichia coli 536]
 gi|190909518|gb|EDV69103.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli F11]
 gi|227835411|gb|EEJ45877.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli 83972]
 gi|307554080|gb|ADN46855.1| DD-carboxypeptidase [Escherichia coli ABU 83972]
 gi|323956179|gb|EGB51930.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H263]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|256017815|ref|ZP_05431680.1| D-alanyl-D-alanine carboxypeptidase [Shigella sp. D9]
          Length = 388

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|260899720|ref|ZP_05908115.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AQ4037]
 gi|308106862|gb|EFO44402.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AQ4037]
          Length = 385

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    ++ ++  +  +             +   Y L+D  +G +IAE+       PASL
Sbjct: 1   MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I +D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGEVESKVRVWKGNANQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       +   +   + K
Sbjct: 301 EAIFAKDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|332532441|ref|ZP_08408319.1| D-alanyl-D-alanine carboxypeptidase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038084|gb|EGI74531.1| D-alanyl-D-alanine carboxypeptidase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 387

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 96/334 (28%), Positives = 147/334 (44%), Gaps = 10/334 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++   A+ S     +          Y L+D  TG VIAE   D    PASLTK+MT+YV+
Sbjct: 15  LVCTAAVFSASAQIIPAPPQVNAKGYFLVDFTTGKVIAEGEADTQLAPASLTKMMTSYVI 74

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            + +K      T  +T+S+ A        S    + G  +++D     +I++S ND  VA
Sbjct: 75  GTEIKAGNIATTDMVTVSEKAWAKNFPESSKMFIEVGKQISVDELNHGIIIQSGNDACVA 134

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  F   MN  +  LG+S +HF+N+HG+    H+TT RDMA L   +  D P
Sbjct: 135 MAEHIAGSESAFADLMNAHAAKLGMSNSHFINSHGLDTDEHFTTPRDMATLGAALIRDVP 194

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                ++ K     G K  N N       L  DG+KTG T  +G+++V SA + D  LIA
Sbjct: 195 DEYALYKQKSFTYNGIKQYNRNSLLWDESLDVDGIKTGHTSEAGYSLVTSATKNDMRLIA 254

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE-- 295
           V++G      R   S  LL+ GF                 +  +  N  N    I E+  
Sbjct: 255 VVMGTSSERARKVESKKLLNYGFRFYETITPYKAGDSFAEQRIWMGNKENVSLGILEDTP 314

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +   + +  N     +     E+      K+  L
Sbjct: 315 ITIPRGQHKNLKANFELDNTLEAPLAKGTKVGTL 348


>gi|194428756|ref|ZP_03061292.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B171]
 gi|194436027|ref|ZP_03068129.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli 101-1]
 gi|215487233|ref|YP_002329664.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218554572|ref|YP_002387485.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli IAI1]
 gi|218705552|ref|YP_002413071.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli UMN026]
 gi|293405492|ref|ZP_06649484.1| dacD [Escherichia coli FVEC1412]
 gi|298381180|ref|ZP_06990779.1| dacD [Escherichia coli FVEC1302]
 gi|307312424|ref|ZP_07592058.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli W]
 gi|312967243|ref|ZP_07781459.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 2362-75]
 gi|331668710|ref|ZP_08369558.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA271]
 gi|194413203|gb|EDX29489.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B171]
 gi|194424755|gb|EDX40740.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli 101-1]
 gi|215265305|emb|CAS09700.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218361340|emb|CAQ98928.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli IAI1]
 gi|218432649|emb|CAR13544.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli UMN026]
 gi|222033782|emb|CAP76523.1| Penicillin-binding protein 6B [Escherichia coli LF82]
 gi|291427700|gb|EFF00727.1| dacD [Escherichia coli FVEC1412]
 gi|298278622|gb|EFI20136.1| dacD [Escherichia coli FVEC1302]
 gi|306907595|gb|EFN38098.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli W]
 gi|312288051|gb|EFR15955.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 2362-75]
 gi|312946640|gb|ADR27467.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315061285|gb|ADT75612.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli W]
 gi|320193299|gb|EFW67937.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli WV_060327]
 gi|323378135|gb|ADX50403.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli KO11]
 gi|330911850|gb|EGH40360.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli AA86]
 gi|331063904|gb|EGI35815.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA271]
          Length = 388

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|319796225|ref|YP_004157865.1| beta-lactamase [Variovorax paradoxus EPS]
 gi|315598688|gb|ADU39754.1| Beta-lactamase [Variovorax paradoxus EPS]
          Length = 389

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 97/351 (27%), Positives = 157/351 (44%), Gaps = 15/351 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R  ++  A ++       +          Y LLD     ++A+   D P  PASLTKLM
Sbjct: 8   LRALVLTAAASVGVIAAAQVPAPPEVAARSYLLLDVTANQILAQKDIDSPVEPASLTKLM 67

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +AY+VF  L+ KK  LT    +S  A + P S         + +++ +K LIV+S ND  
Sbjct: 68  SAYIVFDALRAKKITLTQTFPVSPRAWKMPGSRMFIDPKMQVPVEDLIKGLIVQSGNDAT 127

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  T + FV+ MN  +K LG+  T + N  G+   GH TTARD++IL+ R+  D
Sbjct: 128 VALAEGVGGTVEHFVELMNAQAKALGMKNTSYKNPEGLTAPGHTTTARDLSILATRLVRD 187

Query: 181 FPQYMHYFQIKGLEI---KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-- 235
           FP+   Y+ IK             N N  +      DG+KTG T A+G+ ++A+A +   
Sbjct: 188 FPEEAKYYAIKKYRYPGTPSTNDTNRNLLLFRDPTVDGLKTGHTEAAGYCMIATAKRDFP 247

Query: 236 ----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNE 288
                + L++++LGA     R   S  LL+ G+      +  +           +   N 
Sbjct: 248 NLTGGRRLLSIVLGASSETVRANESQKLLNWGYTAYDAVRLFDAGQPAATPAVWKGKENV 307

Query: 289 VPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +     E   V           TQ+       + F  ++ +  LK  +  +
Sbjct: 308 LKLGRPEAIVVAVPAGSASKIKTQVARPDPLVAPFTKYQAVGSLKVTLDDQ 358


>gi|169632895|ref|YP_001706631.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter baumannii SDF]
 gi|169151687|emb|CAP00477.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter baumannii]
          Length = 382

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/339 (24%), Positives = 150/339 (44%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +I++S ND +
Sbjct: 67  IIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA+L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGMPAEGHYSTAKDMAVLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISE 294
           +VI G    + R   + +LL+ GF N          + +      F ++N        + 
Sbjct: 247 SVIFGTPSMSERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKENEVQVGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     + +     +K  ++   +
Sbjct: 307 NVTMPKGKADGIKTQLVV---QPNLNAPLQKGQVVGKLV 342


>gi|154500121|ref|ZP_02038159.1| hypothetical protein BACCAP_03781 [Bacteroides capillosus ATCC
           29799]
 gi|150271211|gb|EDM98480.1| hypothetical protein BACCAP_03781 [Bacteroides capillosus ATCC
           29799]
          Length = 383

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/315 (27%), Positives = 141/315 (44%), Gaps = 4/315 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            T       L++  TG ++ E        PAS+TK+MT  +V   +   +  L   +TIS
Sbjct: 31  PTVNCGAAVLMEKETGTILYEQNSHDKLEPASVTKIMTLLLVMEAVDSGRISLDQTVTIS 90

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +A     S    K+G  MT+ + LK + V SAND AVA+AE +  +E+ FV  MN  + 
Sbjct: 91  AHAVSMGGSQIWLKEGEQMTVHDLLKAVAVVSANDGAVALAELVAGSEEGFVALMNQRAA 150

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP--QYMHYFQIKGLEIKGKKYP 201
            LG++ T F+N  G+   GH T+A D+A++S  +  + P  +      +  L     +  
Sbjct: 151 ELGMADTTFVNCTGLPAAGHLTSAHDIALMSRELILNHPSIREYTTIWMDSLRDGAFQLT 210

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           NTN  +  + GA G+KTG T ++ + + A+A +G   LIAV+L +     R   + +LL 
Sbjct: 211 NTNKLIRFYDGATGLKTGSTDSALYCLSATAERGGMELIAVVLKSPTSQDRFDAARALLD 270

Query: 262 MGFYNKT--DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            GF N T  D      +          + V  +  +      +    N+   +    E+ 
Sbjct: 271 YGFANYTLMDVYPDQALPPIDVLLGEEDCVQPVLSQSSRILVDKAQLNSVTSQINLCENV 330

Query: 320 FIDFEKITLLKNKIT 334
               E    L   + 
Sbjct: 331 EAPVEAGQKLGEMVV 345


>gi|304395655|ref|ZP_07377538.1| Beta-lactamase [Pantoea sp. aB]
 gi|304356949|gb|EFM21313.1| Beta-lactamase [Pantoea sp. aB]
          Length = 420

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++  V  +IA+++              +          Y L+D N+G V+AE   D   
Sbjct: 27  LKRLTVGSLIAISLSHAAIADDVNLKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 86

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+  +A                K G  + + 
Sbjct: 87  DPASLTKMMTSYVIGQAVKAGKIHQDDLVTVGPDAWATGNPVFKGSSLMFLKPGDRVPVS 146

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 147 QLTRGIVLQSGNDACVAMADYVAGSQDAFVNLMNNYVKALGLQNTHFGTVHGLDAEGQYS 206

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P+    ++ K       +  N N     T L  DG+KTG T ++
Sbjct: 207 SARDMALIGQALIRDVPEEYAVYKEKEFTFNNIRQMNRNGLLWDTNLNVDGIKTGHTNSA 266

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 267 GYNLVASATEGQMRLISAVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPV 326

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++   T       + +              +K  ++ + 
Sbjct: 327 WFGDNDRVQLGVEKDAYLTIPRGRMKDLKASYVLTNTELHAPLKKNQVVGSI 378


>gi|323524598|ref|YP_004226751.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp.
           CCGE1001]
 gi|323381600|gb|ADX53691.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp.
           CCGE1001]
          Length = 409

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 157/340 (46%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   + ++               + L+D  +  V+A   PD    PASLTKLMTAY+V
Sbjct: 30  VVLPATLAASTAFAQVPPPAVNARSWVLVDATSNQVLASGNPDERVEPASLTKLMTAYLV 89

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L+ KK  +   +T S+         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 90  FEALQTKKIAMDQTVTPSEAVRRVRTDESRMFVEANKPVTVHDLVYGMIVQSGNDAAIAL 149

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG++ THF + +G+    HYTTA D+A+LS R+  DFP 
Sbjct: 150 AELVGGSEAQFVNMMNTEAQRLGMTHTHFADVNGMPDPQHYTTAGDLAVLSARLIRDFPD 209

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 210 YYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGTPDAS 269

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+    +    +
Sbjct: 270 RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTVRLYKANQVVGTPRVYKGAQDSVQIGV 329

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q+ +     +   + +++   K
Sbjct: 330 KSDQYITVPKGMADKVKPQIDQIDPLIAPIANGQQVGTAK 369


>gi|256022304|ref|ZP_05436169.1| D-alanyl-D-alanine carboxypeptidase [Escherichia sp. 4_1_40B]
          Length = 388

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/351 (25%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAESWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + +        +  +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   + +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAPISAHQRVGEI 351


>gi|294142181|ref|YP_003558159.1| D-alanyl-D-alanine carboxypeptidase [Shewanella violacea DSS12]
 gi|293328650|dbj|BAJ03381.1| D-alanyl-D-alanine carboxypeptidase [Shewanella violacea DSS12]
          Length = 390

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 153/348 (43%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  ++   +   S     +   IA T     Y L+D NTG +I E       NPASLTK
Sbjct: 8   LKTLILATTVVCSSTYAAPIVTPIAPTVAAKAYVLMDFNTGQIITEENAYESLNPASLTK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         + +SK A        S    + G  +T+D+    +I++S
Sbjct: 68  MMTSYVIGQEMKAGNISPEDEVVVSKKAWSKNFPDSSKMFIEVGKHVTVDDLNHGIIIQS 127

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ +K LG+  +HF NAHG+    H +TA DMAIL  
Sbjct: 128 GNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMKDSHFENAHGLDATNHKSTAYDMAILGA 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    +  K     G K  N N       +  DG+KTG T  +G+N+V SA +
Sbjct: 188 ALIRDVPKEYTLYSQKSFTYNGIKQYNRNGLLWDKSMKVDGIKTGHTSGAGYNLVTSATK 247

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               L++V++G    + R   S  LL+ GF                 Q+    +  ++  
Sbjct: 248 DGMRLVSVVMGTRSESARKAESKKLLNYGFRFFETITPYKAGDSFVSQKIWYGDKESVDL 307

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++ +  N     +  K+  +     E +  +  ++  K
Sbjct: 308 GAITDTPITISRGQAKNLQANFELTKELTAPIAKGETVGRIYFQLNGK 355


>gi|226311980|ref|YP_002771874.1| D-alanyl-D-alanine carboxypeptidase precursor [Brevibacillus brevis
           NBRC 100599]
 gi|226094928|dbj|BAH43370.1| putative D-alanyl-D-alanine carboxypeptidase precursor
           [Brevibacillus brevis NBRC 100599]
          Length = 394

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/351 (24%), Positives = 158/351 (45%), Gaps = 21/351 (5%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYP 47
           M++   + +   M   IF  ++IA               +     +++ +TG V+ E   
Sbjct: 1   MKRNGYLALCFLMCFTIFSPMAIAKEKAGQQKSDNHFAPQASSAVMIEADTGTVLYEKNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +    PAS+TK+MT  ++   ++  +  LT  +  S+ A+    S    + G  MT+++ 
Sbjct: 61  NEKMPPASITKVMTMLLIMEAVERGELKLTDKVRTSERAASMGGSQIFLQPGEEMTVEDM 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + S ND +VA+AE L  TE+ FV  MN  ++ LG+  THF+N++G+    HY++A
Sbjct: 121 LKGIAIASGNDASVAMAEHLAGTEESFVTRMNERAQQLGMKNTHFVNSNGLPAANHYSSA 180

Query: 168 RDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            D+AI+S  +            +   ++          NTN  V  + G DG+KTG+T  
Sbjct: 181 GDIAIMSRELLKHEGITKFTGTYQDYLRKDTESPFWLVNTNKLVRFYEGVDGLKTGYTGE 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           + + + A+A + +  +IAV+LG  D  TRN   +++ +  F +                 
Sbjct: 241 AKYCLTATAKRNNMRVIAVVLGEPDVKTRNNEVSTMFNYAFTHFKVTPMYKKGEPVRTLV 300

Query: 284 NLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   I+      V    K+  + +T  KE   KE+      K  ++ 
Sbjct: 301 VDKGQKSQINAVTPHAVSLLMKKGESADTFQKEIVIKEAVHAPIAKNQVIG 351


>gi|144899826|emb|CAM76690.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 387

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/337 (24%), Positives = 144/337 (42%), Gaps = 7/337 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            V++  A+        +     +     L+D  TG ++ E   D    P+S++KLMTAY+
Sbjct: 11  FVLVCAALTLGGAAARAETIETQARQAILIDYKTGTILLEKNSDELMVPSSMSKLMTAYL 70

Query: 65  VFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VF  LKE    +   + +S+ A +       S      GS+  + + ++ +I++S ND  
Sbjct: 71  VFEKLKEGSWKMDDQLPVSETAWKRHFKSGGSLMFLPVGSSAKVGDLIRGVIIQSGNDAC 130

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
             +AE+   TE+ F +     +++LG+  T   NA G     H TTARD++IL+ R+ +D
Sbjct: 131 SVLAEAHSGTEEAFAEEATRKARDLGMLHTTLRNASGWPDPEHLTTARDLSILARRLISD 190

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+Y   +  +     G +  N N  +    GADG+KTG T A+G+ +V +  +G++ +I
Sbjct: 191 FPEYFPIYSEREFVFNGIRQGNRNPLLYGVSGADGLKTGHTEAAGYGLVGTVKRGERRII 250

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVC 297
            VI G      R++ SA L+   F    +                   +  VP ++ E  
Sbjct: 251 MVINGLKSMKERSEESARLMEWAFREFDNYALFKPGDMVTDAEVWLGEAANVPLVAGEKL 310

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                          A           K   L   + 
Sbjct: 311 EVTMPHKARREMKVTAVYDGPIAAPIRKGETLGKLLI 347


>gi|261821229|ref|YP_003259335.1| beta-lactamase [Pectobacterium wasabiae WPP163]
 gi|261605242|gb|ACX87728.1| Beta-lactamase [Pectobacterium wasabiae WPP163]
          Length = 401

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 90/330 (27%), Positives = 147/330 (44%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                 L          + L+D  +G V+AE+  D   +PASLTK+M +YV+   +K  K
Sbjct: 26  FTSAEQLPAVPQIDAKAFILMDHASGKVLAESNADERLDPASLTKIMASYVIGQAIKSGK 85

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +T+ K+A                K G  + +    K ++++S ND ++A+A+ +
Sbjct: 86  IRPTDEVTVGKDAWATGNPALRGSSLMFLKPGDRIPVSELNKGIVIQSGNDASIALADYV 145

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN +K L L+ THF+  HG+   G Y+TARDMA+L   +  D P+    
Sbjct: 146 AGSQDAFVSLMNNYAKALNLTNTHFLTVHGLDAAGQYSTARDMALLGQALIRDVPEEYAL 205

Query: 188 FQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            + K       + PN N     T L  DG+KTG T  +G N+VASA +G+  LI+V+LGA
Sbjct: 206 HKEKEFTFNNIRQPNRNRLLWSTNLNVDGVKTGHTNGAGHNLVASATEGNMRLISVVLGA 265

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKE 302
                R + S  LL+ GF        I        +  +          ++++   T  +
Sbjct: 266 QTDAIRFRESEKLLTWGFRFFETVTPIKADAPFTTQRVWFGTEKEARLGVAQDAALTIPK 325

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               N +     ++        K  ++   
Sbjct: 326 GQMKNLKASFTLNQPQLSAPLTKNQVVGTI 355


>gi|84387870|ref|ZP_00990884.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio splendidus
           12B01]
 gi|84377216|gb|EAP94085.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio splendidus
           12B01]
          Length = 373

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 89/326 (27%), Positives = 138/326 (42%), Gaps = 9/326 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
                  +    +     Y L+D N+G V+ E       NPASLTKLMT+YV    ++  
Sbjct: 6   AIAAPSIVPSPPSLGAKGYVLIDFNSGDVLVEKNAHTKLNPASLTKLMTSYVAGQEMQRG 65

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                  + IS+NA        S    +  + + + +  + LI++S ND +VAIAE +  
Sbjct: 66  NISADDQVRISENAWAKNFPDSSKMFIEVNTDVAMMDLYRGLIIQSGNDASVAIAEHVAG 125

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++  FV  MN+ + +L L  THF NAHG+     Y+T  D+A+L   I  D P     + 
Sbjct: 126 SQDAFVDLMNSWATSLKLENTHFANAHGLDADDLYSTPYDIALLGRAIIRDLPDVYGLYS 185

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            +     G    N N       L  DGMKTG+T  +G+++ +SA QG+  LIAV++GA  
Sbjct: 186 ERSFSYNGITQHNRNGLLRDRSLTVDGMKTGYTSGAGYSLASSATQGEMRLIAVVMGASS 245

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEII 304
             +R   S  LLS GF                 +  +          ++E+   T  +  
Sbjct: 246 VKSRESDSKQLLSYGFRFFDTLNPHQGGDEVAEEKVWFGAKDTLKLGVAEDTFITLPKSD 305

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLK 330
           +         D E       +   L 
Sbjct: 306 SKKLTASIELDSE-LKAPIAEGQTLG 330


>gi|254476532|ref|ZP_05089918.1| D-alanyl-D-alanine carboxypeptidase protein [Ruegeria sp. R11]
 gi|214030775|gb|EEB71610.1| D-alanyl-D-alanine carboxypeptidase protein [Ruegeria sp. R11]
          Length = 538

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/325 (32%), Positives = 164/325 (50%), Gaps = 5/325 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++ + M+    P +  A         ++D  TG V+     D   +PASLTK+MT Y+ 
Sbjct: 29  LVVFLTMIMAAPPNVGAAP----YAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIA 84

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  ++  +  L T + IS+NA+  PPS    K G  +     ++   +KSAND A AI E
Sbjct: 85  FEAVRNGEITLDTKVKISRNAAAEPPSKLGLKAGQRIAFRYLIRAAAIKSANDAATAIGE 144

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           +L  +E  F + M  T+K LG+S T F NAHG+ ++GH +TARDM  L   I  D+P+Y 
Sbjct: 145 TLSGSEAAFARRMTRTAKALGMSRTTFKNAHGLTENGHMSTARDMTTLGRHILYDYPEYY 204

Query: 186 HYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           + F  K  +   +  PNTN   +  + GADG+KTG+T A+GFN+VASA +G++ +IA + 
Sbjct: 205 NLFSRKSADAGVRTVPNTNRRLLAAYRGADGIKTGYTRAAGFNLVASAQRGNERVIATVF 264

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G     +RN   A LL +GF       K+    +  YQ N        + +    +   +
Sbjct: 265 GGKSSTSRNAKVAELLDLGFRRAPSHAKLRRPAQPPYQGNRGLGTQVANADGTAGKTVRV 324

Query: 305 NYNTQMKEAKDKESHFIDFEKITLL 329
           +   +      +       E  TLL
Sbjct: 325 SGLVKTSLRPKQRPVSETQEPATLL 349


>gi|77359968|ref|YP_339543.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874879|emb|CAI86100.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 387

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 98/334 (29%), Positives = 150/334 (44%), Gaps = 10/334 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++ + A+ S     +          Y L+D  TG VIA+   D    PASLTK+MT+YV+
Sbjct: 15  LVCSAAVFSATAQIIPAPPQVNAKGYFLVDFTTGKVIAQGEADTKLAPASLTKMMTSYVI 74

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            + +K      T  +T+S+ A        S    + G  +++D+    +I++S ND  VA
Sbjct: 75  GTEVKAGNIAPTDMVTVSEKAWAKNFPESSKMFIEVGKQISVDDLNHGIIIQSGNDACVA 134

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  F   MN  +  LG+S THF+N+HG+    HYTT RDMA L   +  D P
Sbjct: 135 MAEHIAGSESAFADLMNAHAAKLGMSNTHFINSHGLDTDAHYTTPRDMATLGGALIRDVP 194

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                ++ K     G K  N N       L  DG+KTG T  +G+++V SA + D  LIA
Sbjct: 195 DEYALYKKKSFTYNGIKQYNRNSLLWDESLDVDGIKTGHTSDAGYSLVTSATKNDMRLIA 254

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE-- 295
           V++G      R + S  LL+ GF                 +  +  N  N    I E+  
Sbjct: 255 VVMGTSSERARKEESKKLLNYGFRFYETITPYKAGDSFAEQRIWMGNKENVSLGILEDTP 314

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +   + +  N     K     E+      K+  L
Sbjct: 315 ITIPRGQHKNLKANFKLDNTLEAPLAKGTKVGTL 348


>gi|167579652|ref|ZP_02372526.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis TXDOH]
          Length = 375

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 4   ATYAPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDSKK 63

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 64  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 123

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG++ THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 124 AQFVNMMNAQAQRLGMTHTHFADVNGMPDPNHYTTAGDLATLSTHLIRDYPDYYNIFSVK 183

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 184 EFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRSLPGAADATRRLVTVMM 243

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 244 GETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIDTPRVYKGKSNNVQVGVKKDQFITV 303

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 304 PRGLADKVKPEVALNAPLIAPLADGQAVGSVK 335


>gi|304391674|ref|ZP_07373616.1| D-alanyl-D-alanine carboxypeptidase DacC [Ahrensia sp. R2A130]
 gi|303295903|gb|EFL90261.1| D-alanyl-D-alanine carboxypeptidase DacC [Ahrensia sp. R2A130]
          Length = 384

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/322 (24%), Positives = 134/322 (41%), Gaps = 8/322 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             + +         ++D  TG V+ +   D    PAS+ KLMT  VVF  +K     L  
Sbjct: 19  AFAQSFETAAKQAIVMDYETGSVLFQKNADELMPPASMAKLMTMEVVFDAVKRGALELDD 78

Query: 79  PITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             TISK+  +        S         + L+N ++ +IV+S ND A+AIAE +  +E  
Sbjct: 79  TFTISKDVWQRGGATSGGSTMFADLNDDIALENLIRGVIVQSGNDAAMAIAEGMAGSETG 138

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  ++ +GL  ++F N+ G+       TAR++ +L+  +   +P+    +     
Sbjct: 139 FAGLMNQRARRIGLEKSNFTNSTGLPDPNQRVTARELGLLARHLIRTYPELYQIYAEPEF 198

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                +  N N  +G   GADG+KTG+T ASG+ + ASA  GD+ +I V+ G   +  R 
Sbjct: 199 TWNKVRQRNRNPILGRVDGADGLKTGYTEASGYGLTASAKVGDKRIIIVLNGMSSQAERR 258

Query: 254 KVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             +  ++   F      K         +        + VP  +E   +    +   +   
Sbjct: 259 NEAIKMMRWAFRAFQSIKLFEEGEIVGEATLFGGAKSGVPLKAEGALSIFVPVGFRDRLK 318

Query: 311 KEAKDKESHFIDFEKITLLKNK 332
            +   +       E  T +   
Sbjct: 319 ADIVFQGPIKAPVEAGTRIGKL 340


>gi|218695635|ref|YP_002403302.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli 55989]
 gi|218352367|emb|CAU98141.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli 55989]
          Length = 388

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAVNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|254459679|ref|ZP_05073095.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676268|gb|EDZ40755.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 392

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/342 (24%), Positives = 149/342 (43%), Gaps = 8/342 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR  +  IA  ++  I    + A   +     ++D  TG V+     D    PAS++K+M
Sbjct: 1   MRHLITTIAALVVPLILALPAGAFETRAASAFVIDQTTGTVLLNKNADQMLPPASMSKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ + +L   + +SK+A  Y  S         +T+++ ++ +IV S ND  
Sbjct: 61  TLYITFEALRDGRLVLDEKLPVSKHAMAYGGSTMFLDTTDRITVEDLIRGIIVLSGNDAC 120

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             IAE+L     E  F + M   ++ LG++ + F N++G  Q GH  + RD+A+L+ R+ 
Sbjct: 121 AVIAEALSPDGTEAGFARFMTQRAQQLGMTNSTFSNSNGWPQAGHRMSMRDLALLANRVI 180

Query: 179 TDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           TDFP +   F  +  +      +   N N  +   +GADG+KTG T  +G+ +V SA Q 
Sbjct: 181 TDFPSFYPLFSEREFKFDGRAPQNTRNRNPLLSLGIGADGLKTGHTQEAGYGLVGSAKQR 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNI 292
            + +I VI G      R + + S+++  F     +                    +V  +
Sbjct: 241 GRRVIFVISGLQSAQARAEEAESIVNWAFRQFAVKPVAKAGTSVATADVWMGRDQKVQLV 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             E  +    +      + E           EK   +   + 
Sbjct: 301 PMEDVSMLMPVTTGVKVVAEVIYNGPITAPIEKDQQIAELVI 342


>gi|157155424|ref|YP_001463361.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E24377A]
 gi|157077454|gb|ABV17162.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E24377A]
 gi|323961778|gb|EGB57379.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H489]
          Length = 388

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|157376621|ref|YP_001475221.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella sediminis
           HAW-EB3]
 gi|157318995|gb|ABV38093.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella sediminis
           HAW-EB3]
          Length = 395

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 12/348 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++  ++   +A             A T     + L+D NTG VIAE       NPASLTK
Sbjct: 13  LKTLILATTVACSFAYAAPVVTPNAPTVAAKAFILMDYNTGQVIAEENAYESLNPASLTK 72

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +MT+YV+   +K         +TISK A        S    + G  +T+D+    +I++S
Sbjct: 73  MMTSYVIGHEIKVGNISPDDKVTISKKAWSKNFPDSSKMFIEVGKQVTVDDLNHGIIIQS 132

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+AE +  TE  FV  MN+ SK LG+  ++F N+HG+    H TTA DMA+L  
Sbjct: 133 GNDACVAMAEHIAGTEDGFVDLMNSWSKQLGMEDSYFENSHGLDSENHKTTAYDMALLGA 192

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +  D P+    ++ K       K  N N       +  DG+KTG T  +G+N+V SA +
Sbjct: 193 ALIRDVPEEYVLYKKKSFTYNSIKQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVTSATK 252

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
               L+AV++G    + R   S  +L+ GF                 QQ    +  ++  
Sbjct: 253 DGMRLVAVVMGTKSESARKAESKKILNYGFRFFETITPYKAGESFVTQQIWYGDKESVDL 312

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                  +  ++ +  N     +  K+  +     E +  +  ++  K
Sbjct: 313 GVLTDTPITISRGQAKNLQANFELTKELTAPLAKGETVGRIFFQLNGK 360


>gi|83718804|ref|YP_440938.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
 gi|257140407|ref|ZP_05588669.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
 gi|83652629|gb|ABC36692.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
          Length = 436

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 66  TYAPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 125

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 126 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 185

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 186 QFVNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLATLSTHLIRDYPDYYNIFSVKE 245

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 246 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRSLPGAADATRRLVTVMMG 305

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 306 ETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIDTPRVYKGKSNNVQVGVKKDQFITVP 365

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 366 RGLADKVKPEVALNAPLIAPLADGQAVGSVK 396


>gi|306814866|ref|ZP_07449028.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli NC101]
 gi|305852260|gb|EFM52712.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli NC101]
          Length = 388

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWAKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|327253142|gb|EGE64796.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli STEC_7v]
          Length = 388

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  K ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVKILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +         +E      +    + + K   D +           +   
Sbjct: 301 YGDKETIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|28901449|ref|NP_801104.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260363002|ref|ZP_05775871.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus K5030]
 gi|260880289|ref|ZP_05892644.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AN-5034]
 gi|260896672|ref|ZP_05905168.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus Peru-466]
 gi|28809996|dbj|BAC62937.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085410|gb|EFO35105.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus Peru-466]
 gi|308091912|gb|EFO41607.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AN-5034]
 gi|308112244|gb|EFO49784.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus K5030]
          Length = 385

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    ++ ++  +  +             +   Y L+D  +G +IAE+       PASL
Sbjct: 1   MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I +D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGQVESKVRVWKGNANQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       +   +   + K
Sbjct: 301 EAIFAKDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|257413914|ref|ZP_04744661.2| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
 gi|257201876|gb|EEV00161.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
          Length = 402

 Score =  204 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/340 (26%), Positives = 154/340 (45%), Gaps = 11/340 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V I ++  +      +       P   L++ +TG V+ E       +PAS+TK+MT  ++
Sbjct: 27  VTIPLSPAAQTDTAPAADLNISAPSAILMEASTGAVVYEKNSHEARHPASVTKIMTLLLI 86

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  L  K+  L   +T+S+ A+    S    + G T T++  +K + V SAND  VA+AE
Sbjct: 87  FDALSSKQISLDDTVTVSEYAASMGGSQVFLEPGETQTVETMIKCISVASANDACVAMAE 146

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +E +FV+ MN  +K LG++ T+F+N  G+   GH T+A D+A++S  + T +P+  
Sbjct: 147 HVAGSESEFVRMMNERAKGLGMNDTNFVNCCGLDADGHMTSANDIALMSRELITKYPKIH 206

Query: 186 HYFQIKGLEIKGKK--------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            Y  I    I              NTN  +  +  A G+KTGFT  + + I A+A + D 
Sbjct: 207 DYCTIWMENITHTTAKGSSEFGLTNTNKLIKHYQYATGLKTGFTNTAMYCISATAKKDDM 266

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISE 294
            LIAVI+GA D  +R+  + +LL+ GF       D  +         +    +       
Sbjct: 267 ELIAVIMGAPDIKSRSADATTLLNYGFGKCRIYCDSHEDKLDDLPVEKGLADSVGIIYQR 326

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                  +  +     K  +  E+     +K       + 
Sbjct: 327 PFQYMTTDGSDLTGITKSIELPENVTAPVKKGNTAGKAVY 366


>gi|330861526|emb|CBX71735.1| D-alanyl-D-alanine carboxypeptidase dacC [Yersinia enterocolitica
           W22703]
          Length = 428

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 152/346 (43%), Gaps = 14/346 (4%)

Query: 1   MRQFLV---IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++      ++ +A+          A       Y L+D N+G V+AE   D   +PASLT
Sbjct: 41  LKKLTFSAGLLLLALPYAHAADSPAAPAIDAKAYVLMDYNSGKVLAEGNSDQRLDPASLT 100

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A                K G  + L +  K +
Sbjct: 101 KIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATGNPALRGSSLMFLKPGDQVKLSDLNKGI 160

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MNN +K LGL+ T+FM  HG+   G Y+TA DMA
Sbjct: 161 VIQSGNDASIALADYIAGSQDSFVGLMNNYAKALGLNNTNFMTVHGLDAPGQYSTAHDMA 220

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +L   +  D P      + K       +  N N     T L  DGMKTGFT  +G N+VA
Sbjct: 221 VLGQALIRDVPDEYALHKEKEFTFNKIRQINRNRLLWSTNLNVDGMKTGFTAGAGHNLVA 280

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LL+ GF        I           +  +  
Sbjct: 281 SATDGPMRLISVVLGAPSDRVRFSESEKLLTWGFRFYETVVPIKATKPFVAQKVWFGDTG 340

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++E+   T  +    N +     ++        K  ++   
Sbjct: 341 QAELGVAEDAAITIPKGQMKNLKASYKLNETELRAPLAKHQVVGTI 386


>gi|161502774|ref|YP_001569886.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864121|gb|ABX20744.1| hypothetical protein SARI_00825 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 390

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 147/349 (42%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAINAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAESSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +         ++      +    + + K   DK+           +   
Sbjct: 305 DREKIALGAEQDFWMALPKAEIPHIKAKYVLDKKDLEAPIAAHQRVGEI 353


>gi|188492414|ref|ZP_02999684.1| penicillin binding protein 6B [Escherichia coli 53638]
 gi|188487613|gb|EDU62716.1| penicillin binding protein 6B [Escherichia coli 53638]
          Length = 388

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|54302470|ref|YP_132463.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum SS9]
 gi|46915892|emb|CAG22663.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum SS9]
          Length = 394

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/343 (26%), Positives = 147/343 (42%), Gaps = 14/343 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           ++   +     M S  F   +             + L+   +G VIA    + P  PASL
Sbjct: 7   LKHLSLFTLFTMASLPFSASADVLPSPPVIDAKAWLLMSYESGQVIASFNENEPLAPASL 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TK+MT+YVV   +          + IS+NA        S      G  +T+D   K +I+
Sbjct: 67  TKIMTSYVVGKEINAGHINNDDLVIISENAWGKKFPGSSKMFLNIGDNVTVDQLNKGVII 126

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND  VA+AE +   +  F++ MN  ++ +G+  T+F N HG+     +TTA D+AIL
Sbjct: 127 SSGNDATVALAEHVAGHQAAFIEMMNRQAEVIGMQNTYFTNPHGLDADEQFTTAYDIAIL 186

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  +  D P+    F+ K       K  N N     T L  DG+KTG T  +G+++V+SA
Sbjct: 187 TRALIKDLPEMYGLFKEKSFTFHDIKQGNRNGLLWDTTLNVDGVKTGHTSKAGYSLVSSA 246

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            Q  Q  IAV++G      R   S  LL+ GF    D        +    +        +
Sbjct: 247 EQSGQRFIAVVMGTKSTGIRRSESKKLLTWGFRFYQDLTPTFDGKELEPIKVWYGSPSKV 306

Query: 293 SEE------VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           S E      +   +++  N   ++    + E+     E++  +
Sbjct: 307 SVELGDGGVITVPRRQRKNLEHKVFYNSNLEAPISKGEQVGKI 349


>gi|238920819|ref|YP_002934334.1| D-alanyl-D-alanine carboxypeptidase fraction A [Edwardsiella
           ictaluri 93-146]
 gi|238870388|gb|ACR70099.1| D-alanyl-D-alanine carboxypeptidase DacC [Edwardsiella ictaluri
           93-146]
          Length = 403

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE+  D   NPASLTK+MT+YV+   ++  K
Sbjct: 32  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEHNADERRNPASLTKMMTSYVIGQAMRAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  +++ N ++ + + S ND  VA+A+ +
Sbjct: 92  FGENDVVTVGKDAWATGNPVFQGSSLMFLKPGDQVSVGNLIRGINLVSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+  K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVKALGLQNTHFETVHGLDAPGQFSSARDMALIGQALIRDVPHEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T +  DG+KTG T ++G+N+VASA +G+  LI+ ++G 
Sbjct: 212 YKEKEFTYNNIRQTNRNGLLWDTSMNVDGIKTGHTASAGYNLVASATEGNMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 272 RTFKGRETESKKLLTWGFRFFETVSPLKAGREFASEPVWFGDTDRAQLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++   
Sbjct: 332 GRMKDLKASYVLNSNELDAPLAKDQVVGTI 361


>gi|218708731|ref|YP_002416352.1| putative Penicillin-binding protein [Vibrio splendidus LGP32]
 gi|218321750|emb|CAV17705.1| putative Penicillin-binding protein [Vibrio splendidus LGP32]
          Length = 393

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  + ++ F     +  A       + L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 16  VALSATIATSSFAAPIIVPDAPQIAAKGFVLMDYHSGKVLAEKEMNTQLSPASLTKMMTS 75

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YVV   L+     L   + IS+NA        S    + G+T+ ++   + +I++S ND 
Sbjct: 76  YVVGQELERGNINLNDDVVISENAWAKNFPDSSKMFIEVGTTVKVEELNRGIIIQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  + ++G+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 136 CVAMAEHIAGSEDAFVDLMNAWASSIGMKDTHFANVHGLDNPNLYSTPYDMALLGQALIR 195

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 196 DVPDEYRIYSQKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGKMR 255

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  + N R   S  LLS GF                 +  +  +       + E
Sbjct: 256 LVAVVMGTKNANARKTESKKLLSYGFRFFETVAPHTAGETFVEEKIWMGSKDTVALGVDE 315

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE       K  ++     +
Sbjct: 316 DTFVTLPRGQAKNLKASFVLEKE-LEAPISKGDVVGKLFYQ 355


>gi|89108830|ref|AP_002610.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli str. K-12
           substr. W3110]
 gi|162135904|ref|NP_416514.4| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli str. K-12 substr. MG1655]
 gi|170081640|ref|YP_001730960.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238901200|ref|YP_002926996.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli BW2952]
 gi|3183515|sp|P33013|DACD_ECOLI RecName: Full=D-alanyl-D-alanine carboxypeptidase dacD;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 6b; Short=PBP-6b; Flags:
           Precursor
 gi|85675189|dbj|BAA15838.2| D-alanyl-D-alanine carboxypeptidase [Escherichia coli str. K12
           substr. W3110]
 gi|87082022|gb|AAC75071.2| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli str. K-12 substr. MG1655]
 gi|169889475|gb|ACB03182.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238860731|gb|ACR62729.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli BW2952]
 gi|260448889|gb|ACX39311.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli DH1]
 gi|315136643|dbj|BAJ43802.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli DH1]
 gi|332343793|gb|AEE57127.1| D-alanyl-D-alanine carboxypeptidase DacD [Escherichia coli UMNK88]
          Length = 388

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|193071481|ref|ZP_03052393.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E110019]
 gi|192955203|gb|EDV85694.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E110019]
          Length = 388

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G Y++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQYSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|114327736|ref|YP_744893.1| D-alanyl-D-alanine serine-type carboxypeptidase [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315910|gb|ABI61970.1| D-alanyl-D-alanine serine-type carboxypeptidase [Granulibacter
           bethesdensis CGDNIH1]
          Length = 419

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/315 (25%), Positives = 133/315 (42%), Gaps = 4/315 (1%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                  +  ++D NTG  + +   D    P+S+TKLMTAY+V+  LK  K  +   + +
Sbjct: 68  PYDTVAKWAVVVDFNTGATLLDKEADVQMPPSSMTKLMTAYIVYGELKAGKLQMDQMLPV 127

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S+ A     S        ++ +++ ++ +IV S ND  + +AE +  +E++FV  MN  +
Sbjct: 128 SEKAWRLQGSKMFVPYPGSVKVEDLIRGMIVDSGNDACIVLAEGIAGSEQQFVDLMNQKA 187

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           K LGL+ ++F N  G+    H+ + RD+A L+ RI  DFP+Y H+   K  +    +  N
Sbjct: 188 KLLGLTNSNFENCTGMPSANHHMSVRDIATLARRIIQDFPEYYHFDSEKTFKYNNIEQQN 247

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  V   + ADG+KTG T A G+ + ASA +  + +I V+ G    + R   S  LL  
Sbjct: 248 RNPLVQKGI-ADGLKTGHTDAGGYGVCASAERNKRRVILVVNGLTTSHQRASESERLLEW 306

Query: 263 GFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            F    +                   S  VP +  +                        
Sbjct: 307 AFSQFENVTLFTAGDTIDSAPVYLGTSKTVPLVGGKDLVVTMPRQWQKKAKISISYDAPV 366

Query: 320 FIDFEKITLLKNKIT 334
                K   L     
Sbjct: 367 RAPVTKGAALGTLTI 381


>gi|168238798|ref|ZP_02663856.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194734763|ref|YP_002115095.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194710265|gb|ACF89486.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197288431|gb|EDY27812.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 390

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGLQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 353


>gi|86144247|ref|ZP_01062579.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio sp. MED222]
 gi|85837146|gb|EAQ55258.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrio sp. MED222]
          Length = 381

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 88/332 (26%), Positives = 137/332 (41%), Gaps = 9/332 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            I           +    +     Y L+D N+G V+ E       NPASLTKLMT+YV  
Sbjct: 8   AIVANTAVAAPSIVPSPPSLGAKGYVLIDFNSGDVLVEKNAHTKLNPASLTKLMTSYVAG 67

Query: 67  SFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             +K         + IS+NA        S    +  + + + +  + LI++S ND +VAI
Sbjct: 68  QEMKRGNISADDQVRISENAWAKNFPDSSKMFIEVNTDVAMMDLYRGLIIQSGNDASVAI 127

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  ++  FV  MN+ + +L L  THF NAHG+     Y+T  D+A+L   I  D P 
Sbjct: 128 AEHVAGSQDAFVDLMNSWAASLKLENTHFANAHGLDADDLYSTPYDIALLGRAIIRDLPD 187

Query: 184 YMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
               +  +          N N       L  DGMKTG+T  +G+++ +SA QG+  LIAV
Sbjct: 188 VYGLYSERSFSYNKITQHNRNGLLRDRSLTVDGMKTGYTSGAGYSLASSATQGEMRLIAV 247

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCT 298
           ++GA    +R   S  LLS GF                 +  +          ++E+   
Sbjct: 248 VMGASSVKSRESDSKQLLSYGFRFFDTLNPHQGGDQVAEEKVWFGAQDTLKLGVAEDTFI 307

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           T  +  +        +          +   L 
Sbjct: 308 TLPKSDSKKLTASI-ELISELKAPISEGQTLG 338


>gi|323968145|gb|EGB63554.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli M863]
          Length = 388

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVGRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  K ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVKILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +         +E      +    + + K   D +           +   
Sbjct: 301 YGDKETIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|317047293|ref|YP_004114941.1| beta-lactamase [Pantoea sp. At-9b]
 gi|316948910|gb|ADU68385.1| Beta-lactamase [Pantoea sp. At-9b]
          Length = 428

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++  V   +A+  +             +          Y L+D N+G V+AE   D   
Sbjct: 35  LKRLTVGSLVALSLSHAAIADDVNLKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 94

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 95  DPASLTKMMTSYVIGQAVKAGKIHQDDIVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 154

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  + LGL  THF   HG+   G Y+
Sbjct: 155 QLTRGIVLQSGNDACVAMADYVAGSQDAFVNLMNNYVQALGLKNTHFQTVHGLDADGQYS 214

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T A+
Sbjct: 215 SARDMALIGQALIRDVPDEYAVYHEKEFTFNNIRQLNRNGLLWDTSLNVDGIKTGHTDAA 274

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 275 GYNLVASATEGQMRLISAVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPV 334

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  N       + ++   T       + +     +        +K  ++ + 
Sbjct: 335 WFGNSDRVQLGVEKDAYLTIPRGRMKDLKASYVLNNTELHAPLQKNQVVGSI 386


>gi|107023825|ref|YP_622152.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia cenocepacia
           AU 1054]
 gi|105894014|gb|ABF77179.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Burkholderia cenocepacia AU 1054]
          Length = 529

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 14/342 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 154 FTGAPATYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 213

Query: 69  LKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   +T S          S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 214 LDKKKISMEQIVTPSDAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 273

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN+ +  LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 274 VGGSEGQFVTMMNDEAGRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYS 333

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 334 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 393

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G    + R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 394 SVMMGEQKESERTQDSMKMLNYGYSAFDSVRLFKGGQAISTPRIYKGKDNTVQVGVKGDQ 453

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +       T++       +   + +++  +K     K
Sbjct: 454 WATVPRGLGDKVKTEVDVNAPLIAPLAEGQQVGTVKIVADGK 495


>gi|24112205|ref|NP_706715.1| putative D-alanyl-D-alanine carboxypeptidase, fraction A;
           penicillin-binding protein 5 [Shigella flexneri 2a str.
           301]
 gi|24051049|gb|AAN42422.1| putative D-alanyl-D-alanine carboxypeptidase, fraction A;
           penicillin-binding protein 5 [Shigella flexneri 2a str.
           301]
          Length = 338

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 7/295 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 24  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 83

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 84  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 143

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 144 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 203

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 204 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           LI+V+LGA     R   S  LL+ GF        I        Q+    +   ++
Sbjct: 264 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKIEVN 318


>gi|218690072|ref|YP_002398284.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli ED1a]
 gi|218427636|emb|CAR08547.2| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli ED1a]
          Length = 388

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNIDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|37525520|ref|NP_928864.1| penicillin-binding protein 6 precursor (D-alanyl-D-alanine
           carboxypeptidase fraction C) (DD-pept
           (DD-carboxypeptidase) (PBP-6)idase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784948|emb|CAE13866.1| penicillin-binding protein 6 precursor (D-alanyl-D-alanine
           carboxypeptidase fraction C) (DD-pept
           (DD-carboxypeptidase) (PBP-6)idase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 400

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 153/346 (44%), Gaps = 14/346 (4%)

Query: 1   MRQFLVIIAMAMLSNI---FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++  + ++ +A + +         +        Y L+D ++G ++A   PD   +PASLT
Sbjct: 9   IKCVVAVLTVASMVSARVYASDEPVVPPVDARAYVLMDYDSGKILAAGNPDERLDPASLT 68

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+MT+YVV   +K  K      +T+ K+A                K G  + + +    +
Sbjct: 69  KIMTSYVVGQAIKAGKITPEDIVTVGKDAWATGNPILKGSSLMFLKPGDRVKVIDLNHGV 128

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +V+S ND ++A+A+ +  ++  FV  MNN +K LGL+ THF   HG+   G ++TARDMA
Sbjct: 129 VVQSGNDASIALADYVAGSQDVFVSLMNNYAKALGLTNTHFRTVHGLDAEGQFSTARDMA 188

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  +  D P      + K       + PN N       +  DG+KTG+T  +G+N+VA
Sbjct: 189 VLSQAMIRDVPDEYALHKEKTFTFNKIQQPNRNRLLWNKNMNVDGVKTGYTSGAGYNLVA 248

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA +G   LI+V+LGA     R   S  LL+ G         I           +    S
Sbjct: 249 SATEGPMRLISVVLGAPSDRIRFVESEKLLAWGLRFYETVTPIKASEPFVSQKVWYGGRS 308

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    + ++   T       N +     ++        K  ++   
Sbjct: 309 DVALGVEKDAAITIPRGQLKNLKASYTLNQTPLTAPLTKNQVVGVI 354


>gi|323495455|ref|ZP_08100532.1| D-alanyl-D-alanine carboxypeptidase [Vibrio brasiliensis LMG 20546]
 gi|323310378|gb|EGA63565.1| D-alanyl-D-alanine carboxypeptidase [Vibrio brasiliensis LMG 20546]
          Length = 392

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 152/341 (44%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + ++    S+ F     +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15  IALSATFASSAFASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L+     L   +TISKNA        S    + G+T+ +++  + +I++S ND 
Sbjct: 75  YVIGQELERGNISLQDDVTISKNAWAKNFPDSSKMFIEVGTTVKVEDLNRGIIIQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  +G+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWADTIGMKDTHFANVHGLDNSNLYSTPYDMALLGSALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+    +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPEEYRIYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGKMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  + N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKNANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKIWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE       K  ++     +
Sbjct: 315 DTYVTLPRGQAKNLKASFILEKE-LEAPIMKGDVVGKLYYQ 354


>gi|269139992|ref|YP_003296693.1| D-alanyl-D-alanine carboxypeptidase fraction A [Edwardsiella tarda
           EIB202]
 gi|267985653|gb|ACY85482.1| D-alanyl-D-alanine carboxypeptidase fraction A [Edwardsiella tarda
           EIB202]
 gi|304559825|gb|ADM42489.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda FL6-60]
          Length = 403

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE+  D   NPASLTK+MT+YV+   ++  K
Sbjct: 32  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEHNADERRNPASLTKMMTSYVIGQAMRAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  +++ N ++ + + S ND  VA+A+ +
Sbjct: 92  FGENDVVTVGKDAWATGNPVFQGSSLMFLKPGDQVSVGNLIRGINLVSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+  K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVKALGLQNTHFETVHGLDASGQFSSARDMALIGQALIRDVPHEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T +  DG+KTG T ++G+N+VASA +G+  LI+ ++G 
Sbjct: 212 YKEKEFTYNNIRQTNRNGLLWDTSMNVDGIKTGHTASAGYNLVASATEGNMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 272 RTFKGRETESKKLLTWGFRFFETVSPLKAGREFASEPVWFGDTDRAQLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++   
Sbjct: 332 GRMKDLKASYVLNSNELDAPLAKDQVVGTI 361


>gi|191167708|ref|ZP_03029516.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B7A]
 gi|190902221|gb|EDV61962.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B7A]
 gi|323948386|gb|EGB44371.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H120]
          Length = 388

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|294637512|ref|ZP_06715798.1| D-alanyl-D-alanine carboxypeptidase DacA [Edwardsiella tarda ATCC
           23685]
 gi|291089344|gb|EFE21905.1| D-alanyl-D-alanine carboxypeptidase DacA [Edwardsiella tarda ATCC
           23685]
          Length = 403

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 29/361 (8%)

Query: 1   MRQFLVIIAM------AMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVI 42
           M++    + +      ++L+      + A                   Y L+D N+G V+
Sbjct: 1   MKRKAASLTLKYVAVGSLLAVALTGAARADDVNLKTMIPGVPQIDAEAYILIDYNSGKVL 60

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STF 96
           AE+  D   NPASLTK+MT+YV+   ++  K      +T+ K+A                
Sbjct: 61  AEHNADERRNPASLTKMMTSYVIGQAMRAGKFGENDVVTVGKDAWATGNPVFQGSSLMFL 120

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           K G  +++ N ++ + + S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   H
Sbjct: 121 KPGDQVSVGNLIRGINLVSGNDACVAMADYVAGSQDAFVGLMNNYVKALGLQNTHFETVH 180

Query: 157 GVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADG 215
           G+   G +++ARDMA++   +  D P     ++ K       +  N N     T +  DG
Sbjct: 181 GLDAPGQFSSARDMALIGQALIRDVPHEYAIYKEKEFTYNNIRQMNRNGLLWDTSMNVDG 240

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTG T ++G+N+VASA +G+  LI+ ++G      R   S  LL+ GF        +  
Sbjct: 241 IKTGHTASAGYNLVASATEGNMRLISAVMGGRTFKGRETESKKLLTWGFRFFETVSPLKA 300

Query: 276 I----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                 +  +  +       + ++V  T       + +     +         K  ++  
Sbjct: 301 GREFASEPVWFGDTDRAQLGVDKDVYLTIPRGRMKDLKASYVLNSNELDAPLAKDQVVGT 360

Query: 332 K 332
            
Sbjct: 361 I 361


>gi|257453878|ref|ZP_05619156.1| D-alanyl-D-alanine carboxypeptidase DacC [Enhydrobacter aerosaccus
           SK60]
 gi|257448805|gb|EEV23770.1| D-alanyl-D-alanine carboxypeptidase DacC [Enhydrobacter aerosaccus
           SK60]
          Length = 395

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 154/341 (45%), Gaps = 9/341 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            V  +    +                + L+D +TG V+A+     P+ PASLTK+MT+Y+
Sbjct: 21  FVAASFFATTVQANAAIQQPELDNSAFILIDYDTGTVLAQKNAAQPFPPASLTKMMTSYI 80

Query: 65  VFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           +   L         PI ++  A        S       +T  + + LK +I++S ND + 
Sbjct: 81  IEQRLLSGALKENEPILMTPEAWCKGSSEESCMYVPVNTTAPVIDMLKGIIIQSGNDASK 140

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+A+ +  +E  F   MN  +K +G++ THFMNA G+ Q GH  +A D+A L+  I  + 
Sbjct: 141 AMAQHIGGSETTFADLMNEEAKKIGMTHTHFMNATGMPQEGHQASAEDLAKLAQAIIKNS 200

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
            +Y   +  K     G    N N  + T    DG+KTG T  +G+ +VAS+ +GD  LI+
Sbjct: 201 KKYYPIYSQKQFTYNGITQGNRNALLFTDPTVDGLKTGHTDEAGYCLVASSKRGDMRLIS 260

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISEE 295
           VI+G      R   S +LL+ GF N   +      K    +  +F   +  N V   + +
Sbjct: 261 VIMGTKSAQERADQSRNLLNWGFSNFATKIAAPAQKSYGSVPVNFGAVDKVNVVSKGNLQ 320

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           V   + +    +T +    D ++     +++  L   +  K
Sbjct: 321 VLVPKLDQEKISTVVNLPADVKAPLAQGQEVGKLVAMLNGK 361


>gi|255320588|ref|ZP_05361766.1| D-alanyl-D-alanine carboxypeptidase DacC [Acinetobacter
           radioresistens SK82]
 gi|262378578|ref|ZP_06071735.1| penicillin-binding protein 6 [Acinetobacter radioresistens SH164]
 gi|255302350|gb|EET81589.1| D-alanyl-D-alanine carboxypeptidase DacC [Acinetobacter
           radioresistens SK82]
 gi|262299863|gb|EEY87775.1| penicillin-binding protein 6 [Acinetobacter radioresistens SH164]
          Length = 382

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 86/339 (25%), Positives = 146/339 (43%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   IAALLLLPSFSYAATVLSSPPELNNKSYVLMDYETGQILAAKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T ++   L+ +IV+S ND +
Sbjct: 67  IIEQKLLKGELTENEQVRMNESAWCRGSSSESCMYVPLNGTASVLEMLRGIIVQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G+  THF+N+ G+   GH +TA+DMAIL+  I  D
Sbjct: 127 KAVAEHVAGNEGTFAHMMNQEAKRIGMVNTHFVNSTGMPAEGHVSTAKDMAILAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +GF +  S+ +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGFCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTD------RKKINYIIKDFYQQNLSNEVPNISE 294
           +VI GA     R   +  LL  G+ N         ++ +      F Q+         + 
Sbjct: 247 SVIFGAPTMQERATQTRDLLGWGYANFETANVQPAKQVLAKSKVWFGQEYEVEVGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     +       +K  ++   +
Sbjct: 307 NVTMPKGQADKIKTQLVV---QPKLNAPLQKGQVVGKLV 342


>gi|204929188|ref|ZP_03220331.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204321732|gb|EDZ06931.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|322613672|gb|EFY10612.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620243|gb|EFY17112.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623289|gb|EFY20130.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630494|gb|EFY27263.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632829|gb|EFY29574.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638838|gb|EFY35532.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640341|gb|EFY37000.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647153|gb|EFY43652.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648980|gb|EFY45423.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653886|gb|EFY50210.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660993|gb|EFY57222.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663066|gb|EFY59273.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668511|gb|EFY64666.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673354|gb|EFY69457.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322679140|gb|EFY75194.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683235|gb|EFY79250.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685895|gb|EFY81885.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195182|gb|EFZ80363.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198750|gb|EFZ83850.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202394|gb|EFZ87437.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209221|gb|EFZ94157.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209796|gb|EFZ94719.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216122|gb|EGA00852.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220678|gb|EGA05125.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323223727|gb|EGA08034.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231333|gb|EGA15447.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232575|gb|EGA16672.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240982|gb|EGA25022.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245599|gb|EGA29594.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247629|gb|EGA31578.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251071|gb|EGA34945.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323254840|gb|EGA38635.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323263363|gb|EGA46897.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266318|gb|EGA49807.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271462|gb|EGA54884.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 390

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G+N
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGYN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGLQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 353


>gi|296134797|ref|YP_003642039.1| Beta-lactamase [Thiomonas intermedia K12]
 gi|295794919|gb|ADG29709.1| Beta-lactamase [Thiomonas intermedia K12]
          Length = 413

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 10/323 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                       + ++D  +G ++AE+       PASLTKLMTAY+ F  LKE    L  
Sbjct: 54  ATVPPPKLDARSWLVVDLTSGQILAEHDAHAQEAPASLTKLMTAYLTFKALKEGTIKLNQ 113

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T SK A +   S         +++++ L  +IV+S ND A+ +A+++  +   FV  M
Sbjct: 114 MVTESKEAWQTGGSRMFIDPRVPVSVNDLLLGMIVQSGNDAAMTLAQTVGGSVSAFVAMM 173

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQIKGLEIKG 197
           N  ++  GL  THFM+  G+   GH+TTA D++I++  I  DFP     YF++K      
Sbjct: 174 NRQAQQWGLKGTHFMDPTGLPDPGHHTTAYDLSIIATHIIRDFPADYARYFKVKEFTYNH 233

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ----GDQSLIAVILGALDRNTRN 253
              PN    + T    DGMKTG+T  +G+ ++ SA +    G + L+ V++G      R 
Sbjct: 234 ITQPNRVSLLFTDPSVDGMKTGYTSEAGYCMITSAQRQFPNGPRRLLTVVMGTPTERARG 293

Query: 254 KVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
           + S  LL+  + N  D    +          ++   +      S  V  +    +  + Q
Sbjct: 294 EESQVLLNWAYQNFDDIVLASPGKPVLTAPVWKGVDNKVELGSSVPVVISVPRGMGKDLQ 353

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
            K  +  +      +    +   
Sbjct: 354 TKVVR-PDPLVAPLQAGQRVGQL 375


>gi|91223153|ref|ZP_01258419.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 12G01]
 gi|91191966|gb|EAS78229.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 12G01]
          Length = 385

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 88/347 (25%), Positives = 153/347 (44%), Gaps = 13/347 (3%)

Query: 1   MR----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+    ++ ++  +  +             +   Y L+D  +G +IAE        PASL
Sbjct: 1   MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEYNGRAGLAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMTAYVV   +K  +      +T+S+NA        S    K    +++ N ++ +I+
Sbjct: 61  TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E+ FV  MN  ++ LGL  T+F+N+HG+   G  T+  DMA L
Sbjct: 121 QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMARL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASA 232
              I +D P     +  K  +       N N  +       DG KTG+T  +G+++V+SA
Sbjct: 181 MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
            +G   LI+V++G   +  R   S +LLS GF     ++       +     ++ N +  
Sbjct: 241 KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGQVESKVRVWKGNANQV 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++   T    +          + E       +   +   + K
Sbjct: 301 EAIFAKDAYLTLPRSMTAGLDKSVVLN-EPLIAPIAQGDEIGKVVWK 346


>gi|297539773|ref|YP_003675542.1| beta-lactamase [Methylotenera sp. 301]
 gi|297259120|gb|ADI30965.1| Beta-lactamase [Methylotenera sp. 301]
          Length = 390

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/338 (26%), Positives = 151/338 (44%), Gaps = 10/338 (2%)

Query: 4   FLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           FL+      +S++       ++      +  Y L D N+ +VIA         PASLTK+
Sbjct: 16  FLLSTTALAISSVAQAESAQIAPPPNLAVKAYLLKDFNSNYVIASQNSSMRIEPASLTKI 75

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAY+ F  LK     LT  + +S+ A +   S    +    +T+D  L   I++S ND 
Sbjct: 76  MTAYLAFKALKNGHLSLTQTLPVSELAWKVEGSKMFIEPNKPVTVDELLHGTIIQSGNDS 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           ++A+AE +  TE +F   MN  +  LG+  TH+MNA G+    H+TTA D+A L+  +  
Sbjct: 136 SIALAEGIAGTEPQFADMMNKEAARLGMKNTHYMNATGLPDAQHFTTADDLATLAAALIR 195

Query: 180 DFPQYMHY-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           DFP      + +K         PN N  +      DGMKTG T  +G+ ++ASA +    
Sbjct: 196 DFPDQYQRLYSVKEYTYNKITQPNRNRLLWADPNVDGMKTGHTETAGYCLIASAKRDGTR 255

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
            I+V+LGA   + R   S  LL+ GF     +              ++   +     ++ 
Sbjct: 256 RISVVLGAPTDSARASESQKLLNYGFQYFDSKLVYKQGQSINQLKVWKGTENQLASTVAN 315

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++  T  +    N +   +  +       +K  ++ + 
Sbjct: 316 DLFVTVPKGDYANVKAVMSSTQP-LIAPIKKGQVIGSV 352


>gi|189351640|ref|YP_001947268.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans ATCC
           17616]
 gi|189335662|dbj|BAG44732.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans ATCC
           17616]
          Length = 410

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 15/338 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK
Sbjct: 39  ATFMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKK 98

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 99  ISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 158

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN+ ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY   F  K
Sbjct: 159 AQFVTMMNDEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEK 218

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
             +    +  N N  +      DG+KTG T A+GF +++SA +         + L+AV++
Sbjct: 219 EFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGFCLISSAKRPIPGASDAQRRLVAVMM 278

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +     ++ +  V  
Sbjct: 279 GEPKESDRTQDSMKMLNYGYSAFDAVRLFKGGQAISTPRLYKGKENTVQVGVASDQWVTV 338

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +        ++       +     +++  +K     K
Sbjct: 339 PRGLGDKVKPEVDVNAPLIAPLAQGQQVGTVKVVADGK 376


>gi|256752045|ref|ZP_05492913.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749055|gb|EEU62091.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 379

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 25/352 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F++   I +  +S++  +     +       ++D  TG V+ E  P      AS TK
Sbjct: 1   MKKFILYLFILLYFMSSVKVYAESYPSISAKAAIVMDQETGRVLYEKNPHEKLPMASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S ND
Sbjct: 61  IMTLLVALEK-----GNLNDIVTVSKRAASVGGSSIWLSPGEKIDMESLLYGLMLNSGND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  + + F++ MN  ++ +G   THF+   G+      HYTTA D+A+++  
Sbjct: 116 AATAIAEHIGGSVENFIEIMNQKAREIGAYNTHFVTPSGLDIGIDDHYTTAYDLALITRY 175

Query: 177 IKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 176 -AFRYPKFAEIVSTKEKTIPWEGREWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 234

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFYQQN 284
           SA +  +  IAV+L +       + S  +L   F      K       I  I  +  ++N
Sbjct: 235 SASREGRRFIAVVLNSP---PMWEDSMKILDYAFSKYKPYKVLEKGELIKKIKVEGGKEN 291

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + V      +   + E  + N +    K  ++     EKI  +  KI ++
Sbjct: 292 SVSVVSERECIIPALEDEKQDVNLEFHFPKSVKAPVEKGEKIGYVTVKIGEE 343


>gi|323152399|gb|EFZ38687.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli EPECa14]
          Length = 390

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRTIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             D P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHDEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|317491387|ref|ZP_07949823.1| D-alanyl-D-alanine carboxypeptidase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920934|gb|EFV42257.1| D-alanyl-D-alanine carboxypeptidase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 402

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 82/347 (23%), Positives = 145/347 (41%), Gaps = 15/347 (4%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++  +     +    ++        A       Y L+D ++G ++ E   D   +PASL
Sbjct: 10  IKKITLGAGLTLMAIPMTYADEAAPAAPQINAKAYVLMDYDSGKILTEANADERLDPASL 69

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+M +YV+   +K  K      + + K+A                K G  + +    K 
Sbjct: 70  TKIMASYVIGQSIKAGKITPNDMVVVGKDAWATGNPILRGSSLMFLKPGDRVPVSELNKG 129

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           ++++S ND ++A+A+ +  ++  FV  MN   +  GL  T F   HG+   G Y++ARDM
Sbjct: 130 VVIQSGNDASIALADYVAGSQDAFVSLMNKYVEAWGLKNTSFKTVHGLDSEGQYSSARDM 189

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIV 229
           A++S R+  D P      + K       +  N N     + L  DG+KTG+T  +G N+V
Sbjct: 190 ALISQRLIADVPDEYALHKEKEFTFNKIRQVNRNRLLWDSSLNVDGIKTGYTSGAGHNLV 249

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
           +SA  G   LI+V+LGA     R + S  LL+ GF        I        +  +  + 
Sbjct: 250 SSATDGPMRLISVVLGAPTDRIRFEESKKLLTWGFRFYETVTPIKVGQAFTTEKVWFGDK 309

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           S     +++    T       N +     ++        K  ++   
Sbjct: 310 SEVELGVNKNAAVTIPRGQLKNLKASFTLNQPQLEAPLAKGQVVGTI 356


>gi|157161502|ref|YP_001458820.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli HS]
 gi|157067182|gb|ABV06437.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli HS]
          Length = 388

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 156/351 (44%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF       +   + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPQIQAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T ++G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSSAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAVI+GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVIMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|15832066|ref|NP_310839.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168764096|ref|ZP_02789103.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4501]
 gi|168777102|ref|ZP_02802109.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4196]
 gi|168784009|ref|ZP_02809016.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4076]
 gi|188025184|ref|ZP_02997384.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4113]
 gi|189402596|ref|ZP_03006773.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189403423|ref|ZP_03007084.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189406210|ref|ZP_03008107.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC508]
 gi|208810754|ref|ZP_03252630.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208816718|ref|ZP_03257838.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208818499|ref|ZP_03258819.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209397891|ref|YP_002271183.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4115]
 gi|209447203|ref|YP_002274288.1| penicillin-binding protein 6b [Stx2-converting phage 1717]
 gi|217329693|ref|ZP_03445772.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. TW14588]
 gi|261256444|ref|ZP_05948977.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283247|ref|YP_003500065.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O55:H7
           str. CB9615]
 gi|293410371|ref|ZP_06653947.1| dacD [Escherichia coli B354]
 gi|13362280|dbj|BAB36235.1| penicillin binding protein 6b [Escherichia coli O157:H7 str. Sakai]
 gi|187767572|gb|EDU31416.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188014404|gb|EDU52526.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4113]
 gi|188998746|gb|EDU67732.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189354737|gb|EDU73156.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189360801|gb|EDU79220.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189365830|gb|EDU84246.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4501]
 gi|189375987|gb|EDU94403.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC508]
 gi|208725270|gb|EDZ74977.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208731061|gb|EDZ79750.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208738622|gb|EDZ86304.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209159291|gb|ACI36724.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4115]
 gi|209361182|gb|ACI43175.1| penicillin-binding protein 6b [Escherichia coli O157:H7]
 gi|209748254|gb|ACI72434.1| penicillin binding protein 6b [Escherichia coli]
 gi|209748256|gb|ACI72435.1| penicillin binding protein 6b [Escherichia coli]
 gi|209748258|gb|ACI72436.1| penicillin binding protein 6b [Escherichia coli]
 gi|217317461|gb|EEC25890.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. TW14588]
 gi|284922011|emb|CBG35089.1| penicillin-binding protein 6B [Escherichia coli 042]
 gi|290763120|gb|ADD57081.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O55:H7
           str. CB9615]
 gi|291470839|gb|EFF13323.1| dacD [Escherichia coli B354]
          Length = 390

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|218699400|ref|YP_002407029.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli IAI39]
 gi|218369386|emb|CAR17143.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli IAI39]
          Length = 388

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLTIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|15802489|ref|NP_288515.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7
           EDL933]
 gi|12516188|gb|AAG57069.1|AE005426_11 penicillin binding protein 6b [Escherichia coli O157:H7 str.
           EDL933]
          Length = 390

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FIFNLSXGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|26248385|ref|NP_754425.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli CFT073]
 gi|237704469|ref|ZP_04534950.1| penicillin-binding protein 6B [Escherichia sp. 3_2_53FAA]
 gi|26108789|gb|AAN80992.1|AE016762_245 Penicillin-binding protein 6B precursor [Escherichia coli CFT073]
 gi|226900835|gb|EEH87094.1| penicillin-binding protein 6B [Escherichia sp. 3_2_53FAA]
          Length = 390

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|315180861|gb|ADT87775.1| D-alanyl-D-alanine carboxypeptidase [Vibrio furnissii NCTC 11218]
          Length = 391

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 151/354 (42%), Gaps = 20/354 (5%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + ++    +        +  A       + L+D ++G V+AE     
Sbjct: 1   MKKSILNSVLASSIALSATFSTAALASPVVIPDAPQIAAKGFVLIDYHSGKVLAEKEMHT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   LK         +TIS+NA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQELKRGNITNDDDVTISRNAWAKNFPDSSKMFIEVGTTVKVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +IV+S ND  VA+AE +  +E  FV  MN  +  LG+  THF N HG+     Y+T
Sbjct: 121 LNQGIIVQSGNDACVAMAEHIAGSEDAFVDLMNAWADTLGMQETHFANVHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
             DMA+L   +  D P     +  +     G    N N       +  DG+KTG T  +G
Sbjct: 181 PYDMALLGQALIRDVPDEYKIYSQQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFY 281
           +++V+SA +G   LIAV++G  D N R   S  LLS GF                 +  +
Sbjct: 241 YSLVSSATEGKMRLIAVVMGTKDMNARKSESKKLLSYGFRFFETVAPHKAGETFVDEKIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             + S     + E+   T       +       +KE      +K  ++     +
Sbjct: 301 MGDKSTVALGVDEDTYVTLPRGQAKDLTASFVLEKE-LKAPIKKGDVVGKLYYQ 353


>gi|332278836|ref|ZP_08391249.1| penicillin-binding protein 6B [Shigella sp. D9]
 gi|332101188|gb|EGJ04534.1| penicillin-binding protein 6B [Shigella sp. D9]
          Length = 390

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|89902561|ref|YP_525032.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodoferax ferrireducens
           T118]
 gi|89347298|gb|ABD71501.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Rhodoferax ferrireducens T118]
          Length = 394

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 103/356 (28%), Positives = 167/356 (46%), Gaps = 26/356 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L+ +A AM  ++              Y L D      +AE   D P   ASLTKLM
Sbjct: 2   MKKLLLTLAAAMCLSVSAQTPQPPEIAARSYLLFDITANQFLAEKDIDSPVEQASLTKLM 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAY+VF  L+ KK  L   + +S++A + P S         + +++ LK +IV+S ND  
Sbjct: 62  TAYIVFDALRSKKIDLKQMLPVSEHAWKMPGSRMFIDPKMKVPVEDLLKGMIVQSGNDAT 121

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE +  T ++FVQ MN  +K LG+ +T++ N  G+ + GH TTARD++IL+ R+  D
Sbjct: 122 MALAEGVGGTVERFVQLMNEQAKALGMKSTNYKNPEGLTEAGHTTTARDLSILATRLMRD 181

Query: 181 FPQYMHYFQIKGLEIKGKKY---PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-- 235
           FP Y+ Y+ IK     G       N N  +      DG+KTG T A+G+ ++A+A +   
Sbjct: 182 FPDYVAYYAIKQYRYPGTPAANGSNRNLLLFRDPTVDGLKTGHTDAAGYCLIATAKRDFV 241

Query: 236 ---------------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYII 277
                           + L++++LGA   N+R   S  LL+ G+      K       ++
Sbjct: 242 GLGAPAAAGSPGATGSRRLLSIVLGATSENSRANESQKLLNWGYTAFEPVKLFDANQAVV 301

Query: 278 KDFYQQNLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                +  +  V     E   V           TQ+  +    + F   +++  LK
Sbjct: 302 SPAVWKGKAAVVKLGRPEAIVVAVPAGTSGKIKTQVLRSDPLVAPFTKGQQVATLK 357


>gi|311068945|ref|YP_003973868.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
 gi|310869462|gb|ADP32937.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
          Length = 389

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 142/318 (44%), Gaps = 8/318 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     L++ +TG V+          PAS+TK+MT  ++   L + K  ++  +  S+ A
Sbjct: 36  EAKSAVLIERDTGKVLYNKNSHERLAPASMTKIMTMLLIMEALDKGKIKMSDKVRTSEYA 95

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    + G  MT+   LK + + S ND +VA+AE +  +E++FVQ MN  +K LG
Sbjct: 96  ASMGGSQIFLEPGEEMTVKEMLKGIAIASGNDSSVAMAEYISGSEEEFVQKMNKKAKELG 155

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPN 202
           L  T F N  G+ + GHY++A DMA++S  +            +   ++    K     N
Sbjct: 156 LKDTTFKNPTGLPEKGHYSSAYDMAMMSKELLKYDKITAFTGTYEDYLREDTDKKFWLVN 215

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  +  + G DG+KTG+T  + + + ASA +G+   IAV+ GA     RN     +L  
Sbjct: 216 TNRLIKFYPGVDGVKTGYTGEAKYCLTASAKKGNMRAIAVVFGASTPKDRNAQVTKMLDY 275

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKES 318
            F                  +    +   I    SE +    K+  +     KE K KE 
Sbjct: 276 AFSQYETHPMYKRNETVAKAKVKKGKQKTIELSTSEPISLLTKKGEDTKHVKKEIKMKEQ 335

Query: 319 HFIDFEKITLLKNKITKK 336
                +K  +L   I KK
Sbjct: 336 ITAPIKKGDVLGTLILKK 353


>gi|170683658|ref|YP_001743130.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli SMS-3-5]
 gi|331647659|ref|ZP_08348751.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli M605]
 gi|331663510|ref|ZP_08364420.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA143]
 gi|170521376|gb|ACB19554.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli SMS-3-5]
 gi|281179111|dbj|BAI55441.1| penicillin binding protein 6 [Escherichia coli SE15]
 gi|323161927|gb|EFZ47801.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli E128010]
 gi|323187689|gb|EFZ72990.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli RN587/1]
 gi|331043383|gb|EGI15521.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli M605]
 gi|331059309|gb|EGI31286.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA143]
          Length = 390

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|330828593|ref|YP_004391545.1| Penicillin-binding protein [Aeromonas veronii B565]
 gi|328803729|gb|AEB48928.1| Penicillin-binding protein [Aeromonas veronii B565]
          Length = 398

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 27/356 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFL----------------SIAETNKLPYYTLLDTNTGHVIAE 44
           M +F   + +A L ++                      A       + L+D  +G V+AE
Sbjct: 1   MSKFARSVLLASLISVTAQANTPVPTPTPNAMPMVVPAAPEISAKAHILIDYYSGQVLAE 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGST 101
              +    PASLTK+MT+Y++   L +     T  +TIS+NA        S    + G  
Sbjct: 61  QNAEERLPPASLTKMMTSYIIGQELLKGNIKRTDMVTISQNAWSKNYSDSSKMFIEVGKQ 120

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +++D+  K +I++S ND  VA+AE L  +   F   MN+ +  LG++ +HFMN HG+   
Sbjct: 121 VSVDDLNKGIIIQSGNDACVAMAEFLAGSTDSFASLMNSWAAKLGMNDSHFMNPHGLDAE 180

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGF 220
           GHY+TA DMA L   +  D P+    +  K     G    N N       L  DG+KTG 
Sbjct: 181 GHYSTAHDMARLGQALIRDLPEEYKIYSQKSFVFNGITQHNRNRLLWDQSLQVDGIKTGH 240

Query: 221 TCASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
               G+N+V+SA       LIAV+LGA    +R   S  LL+ GF             + 
Sbjct: 241 VSQVGYNLVSSATNNEGMRLIAVVLGASSEASRAAESKKLLTYGFRFFQSLTPYKAGTEL 300

Query: 280 FYQQNLSNEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             Q+    + P +         V  T+ +  N     +   + ++     +++  +
Sbjct: 301 VTQKIWMGDKPEVKLGVDKDVSVLVTRGQGNNLKADFQLDSELKAPLAKGQRVGTV 356


>gi|332307130|ref|YP_004434981.1| Beta-lactamase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174459|gb|AEE23713.1| Beta-lactamase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 390

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 97/327 (29%), Positives = 151/327 (46%), Gaps = 10/327 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            ++    +  A T     + L+D  TG VIAE   D    PASLTK+MT+YV+   +   
Sbjct: 23  AASAAVIIPDAPTVSAKGFILVDYQTGKVIAEQNADIQIPPASLTKMMTSYVIGKEIANG 82

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
               T  +TIS+NA        S    + G+ +++ +  + +IV+S ND  VA+AE +  
Sbjct: 83  NIKDTDMVTISENAWAKNFPDSSKMFIEVGTQISVADLNRGIIVQSGNDACVAMAEHIAG 142

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E  F   MN  ++ LG+++T+F+N+HG+    HYTT RDMA L+  + TD P     + 
Sbjct: 143 SEDAFASMMNLHAEKLGMTSTNFVNSHGLQDADHYTTPRDMATLARALITDVPNEYKVYS 202

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            K       K  N N       L  DG+KTG T  +G+++V+SA QGD  LIAV++GA  
Sbjct: 203 EKEFTYNNIKQYNRNGLLWDKSLNVDGIKTGHTSDAGYSLVSSATQGDMRLIAVVMGADS 262

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKE 302
              R   +  LL  GF                    +  +       IS++  +   + +
Sbjct: 263 ERARKVENKKLLKYGFRFYETITPYQAGESFVSHRIFMGDKETVDLGISQDTPITIPRGQ 322

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLL 329
             N     +  K  E+     E +  L
Sbjct: 323 SKNLEANFELDKKLEAPLAKGEVVGKL 349


>gi|292898840|ref|YP_003538209.1| penicillin-binding protein 5 [Erwinia amylovora ATCC 49946]
 gi|291198688|emb|CBJ45797.1| penicillin-binding protein 5 [Erwinia amylovora ATCC 49946]
          Length = 404

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    + +A+  N+  +         +          Y L+D N+G V+AE   D   
Sbjct: 10  LKRLTAGMLIALSLNVVAYADDVNIKTMIPGVPEIDAEAYILIDYNSGKVLAEKNADARR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAIKAGKIHQDDRVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 130 QLTRGIVLQSGNDACVAMADYVAGSQDTFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T ++
Sbjct: 190 SARDMALIGRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTNLNVDGIKTGHTESA 249

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           G+N+VASA +G    LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 250 GYNLVASATEGQQMRLISTVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEP 309

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  N       + ++V  T       + +              +K  ++   
Sbjct: 310 VWFGNSDRVQLGVEKDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVIGTI 362


>gi|307267584|ref|ZP_07549057.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306917391|gb|EFN47692.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 427

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 25/352 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F++   I +  +S++  +     +       ++D  TG V+ E         AS TK
Sbjct: 49  MKKFILYLFILLYFMSSVKVYAESYPSISAKAAIVMDQETGRVLYEKNSHEKLPMASTTK 108

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S ND
Sbjct: 109 IMTLLVALEK-----GNLNDIVTVSKRAASVGGSSIWLSPGEKIDMESLLYGLMLNSGND 163

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  + + FV+ MN  +K +G   THF+   G+      HYTTA D+A+++  
Sbjct: 164 AATAIAEHIGGSVESFVEIMNQKAKEIGAYNTHFVTPSGLDIGIDDHYTTAYDLALITRY 223

Query: 177 IKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 224 -AFRYPKFTEIVSTKEKTIPWEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 282

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFYQQN 284
           SA +  +  IAV+L +       + S  +L   F      K       I  +  +  ++N
Sbjct: 283 SATREGRRFIAVVLNSP---PMWEDSMKILDYAFSKYKPYKVLEKGELIKKVKVEGGKEN 339

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + V   +  +   ++E  N N +    K  ++     EKI  +  KI ++
Sbjct: 340 TVSVVSEKACVIPALEEEKQNVNLEFYLPKSVKAPVEKGEKIGYVTVKIGEE 391


>gi|238028745|ref|YP_002912976.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           glumae BGR1]
 gi|237877939|gb|ACR30272.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           glumae BGR1]
          Length = 433

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 15/330 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 64  TYLPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALASKKI 123

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 124 SMEQIVTPSEAVRRVGTDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 183

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+  THF + +G+    HYTTA D+A+LS R+  DFP Y + F +K 
Sbjct: 184 QFVNMMNAEAQKLGMKGTHFADVNGMPDPQHYTTAGDLAVLSARLIRDFPDYYNIFSVKD 243

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-------DQSLIAVILG 245
                 + PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 244 FTYNHIRQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRPLPGSADVSRRLVTVMMG 303

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKIN---YIIKDFYQQNLSNEVPNISEE---VCTT 299
               + R + S  +L+ G+      +       +      +   N VP   ++   V   
Sbjct: 304 EPRESDRVQDSLKMLNYGYSAFDTVRLYKGGQAVETPRVYKGRVNSVPVGVQKDQFVTLP 363

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +        Q+       +   + +++  +
Sbjct: 364 KGAGDKLKPQVTLNTPLIAPLAEGQQVGTV 393


>gi|269966371|ref|ZP_06180456.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 40B]
 gi|269828958|gb|EEZ83207.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 40B]
          Length = 390

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 9/333 (2%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++       +  A       Y L+D +TG V+ E       NPASLTKLMTAYV    + 
Sbjct: 21  SLAYAAPSVVPNAPELSSRGYVLMDFHTGKVLVERDAHKRLNPASLTKLMTAYVAGQEIN 80

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                L   + IS+NA        S    +  ++++L +  + LIV+S ND +VAIAE +
Sbjct: 81  TGNITLNDEVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLYRGLIVQSGNDASVAIAEHV 140

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  FV  MN+ +  L LS T F N HG+   G Y+T  D+A L   I  D P     
Sbjct: 141 AGSESGFVSLMNSWAAKLELSNTAFTNPHGLDSDGLYSTPYDIAKLGQAIIRDLPDIYPL 200

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +        G    N N       +  DGMKTG+T  +G+++  SA QGD  LIAV++GA
Sbjct: 201 YSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYSLATSATQGDMRLIAVVMGA 260

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKE 302
              N R   S  LLS GF             +      +          ++ +V  T  +
Sbjct: 261 KSENVRESESKQLLSYGFRFYDTVMPTEAGAELAKARVWMGEKDELTVGVANDVYLTLPK 320

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               N Q +  +          +  ++   + K
Sbjct: 321 GDLKNLQAEV-EYNGDLVAPISEQQVVGKVLYK 352


>gi|121535761|ref|ZP_01667563.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosinus
           carboxydivorans Nor1]
 gi|121305660|gb|EAX46600.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosinus
           carboxydivorans Nor1]
          Length = 390

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 80/341 (23%), Positives = 130/341 (38%), Gaps = 14/341 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           LV      L    P    A                L+D N G V+ E  P     PAS+T
Sbjct: 12  LVCFMFFQLMASLPIAWAAPLRTPAQLETTAESAVLMDAN-GAVLWEKEPHKRLPPASVT 70

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    +++ +   T  +  S++A     S    + G  MT+   +  + V SAN
Sbjct: 71  KVMTLLLAVEAVEQGRIKPTDLVYTSEHAWRQGGSQIWLEPGEAMTVQEMMIAVAVVSAN 130

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D AVA+ E +  +E+  V+ MN  + +LGL  THF+N +G+    HY +A D A+L    
Sbjct: 131 DAAVALMEHIYGSEQAAVEAMNKRAASLGLQNTHFVNVNGLPAQDHYMSAYDTALLVKEA 190

Query: 178 KTDFPQYMHY-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
                       +   L        NTN  +  + GADG+KTG+T  + +    +A +  
Sbjct: 191 VRHPLYMELCGIKEYWLREGKNWLVNTNKLLWWYKGADGLKTGWTEEAKYCFAGTAKRDG 250

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
             LIAV+    +  +  + S  L+  GF N                   +         +
Sbjct: 251 LRLIAVVFATPEPRSHLRESMKLMDWGFANFAAVPVAEKEAVVGRIKVNKGMEREVQLVV 310

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           + ++     +  N N Q K   +         +       I
Sbjct: 311 ANDLTLVVPKGQNKNLQKKVVAE-PQVNAPIIQGQKYGELI 350


>gi|74312552|ref|YP_310971.1| D-alanyl-D-alanine carboxypeptidase [Shigella sonnei Ss046]
 gi|73856029|gb|AAZ88736.1| penicillin binding protein 6b [Shigella sonnei Ss046]
          Length = 390

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+ S  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVFSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|86139111|ref|ZP_01057682.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter sp.
           MED193]
 gi|85824342|gb|EAQ44546.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter sp.
           MED193]
          Length = 554

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 104/334 (31%), Positives = 161/334 (48%), Gaps = 2/334 (0%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  L I+ + +   +                ++D  TG V+     D   +PASLTK+MT
Sbjct: 21  RSVLWIMGVVLFLGMALIPPTQAQAAPYAAVVVDARTGEVLHSRNADARLHPASLTKMMT 80

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  ++  +  L   + ISKNA+  PPS    K G  +     ++   VKSAND A 
Sbjct: 81  LYIAFEAVRNGEISLDQKVRISKNAAAEPPSKLGLKSGQRIAFRYLIRASAVKSANDAAT 140

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AI E++  +E  F + M  T+K LG+S T F NAHG+ + GH +TARDM  L   I  D+
Sbjct: 141 AIGEAISGSEAAFARRMTRTAKALGMSRTTFKNAHGLTEAGHLSTARDMTKLGRHILYDY 200

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+Y H F    ++   K  PNTN   + ++ GADG+KTG+T A+G N+VASA +GD+ +I
Sbjct: 201 PEYYHLFSRTSIDAGVKTVPNTNRRLLASYKGADGIKTGYTRAAGSNLVASAKRGDERII 260

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN-LSNEVPNISEEVCTT 299
           A + G     +RN     LL +GF     R ++    +  Y  N        ++      
Sbjct: 261 ATVFGGKSSTSRNARIVELLDLGFRRAPSRARVRAPGRPAYVGNQGIGGSTQVAAATNGG 320

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             + +  N  +K +    +  I      ++   +
Sbjct: 321 AGKTVRVNGLVKTSLRPLARPIPVVDPDVIAEAV 354


>gi|269961547|ref|ZP_06175909.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi 1DA3]
 gi|269833588|gb|EEZ87685.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi 1DA3]
          Length = 392

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  +  + F     +  A       Y L+D N+G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATIAQSAFASPVVVPDAPQIAAKGYVLMDYNSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +I++S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVHDLNRGIIIQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  LG+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWANTLGMKNTHFANVHGLDNPNLYSTPYDMALLGKALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPDEYRIYSDKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  D N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKVWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE      +K  ++     +
Sbjct: 315 DTYVTLPRGEAKNLKASFVLEKE-LEAPIKKGDVVGKLYYQ 354


>gi|226951361|ref|ZP_03821825.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter sp. ATCC 27244]
 gi|226837883|gb|EEH70266.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           [Acinetobacter sp. ATCC 27244]
          Length = 397

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 14/338 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S     LS         Y L+D  TG ++A    D    PAS+TK+MT++++   L + 
Sbjct: 31  FSYAATVLSAPPELNNKSYVLMDYETGQILAAKNEDEKLAPASMTKMMTSFIIEQKLLQG 90

Query: 73  KAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K      + ++++A     S           T T+   L+ +IV+S ND + A+AE +  
Sbjct: 91  KLTEDEHVRMNESAWCRGSSAESCMYVPLNGTATVLEMLRGIIVQSGNDASKAMAEHIAG 150

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
            E  F   MN  +K LG++ T+F+N+ G+   GHY+TA+DMAIL+  I  D  +Y   + 
Sbjct: 151 NEGTFAHMMNQEAKRLGMTNTNFVNSTGMPAEGHYSTAKDMAILAQHIIKDSSKYYPIYS 210

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            K     G K  N N  + T    DG+KTG T  +GF +  S+ +G   LI+VI G    
Sbjct: 211 EKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTSEAGFCLTTSSKRGPMRLISVIFGTPSM 270

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE--EVCTTQKEI 303
           N R   + +LL+ GF N                  +          ++E   V   + + 
Sbjct: 271 NERANQTRALLAWGFANFETANVQPANQAIAKAKVWFGKEDEVQIGLAENFNVTMPKGQA 330

Query: 304 INYNTQMKEAKDKESHFIDFEKITLL-----KNKITKK 336
               TQ+       +     + I  L        I +K
Sbjct: 331 DKIKTQLVIQPQLNAPLAQGQVIGKLVASLDGKVIAEK 368


>gi|50084413|ref|YP_045923.1| D-ala-D-ala-carboxypeptidase [Acinetobacter sp. ADP1]
 gi|49530389|emb|CAG68101.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter sp. ADP1]
          Length = 382

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 87/339 (25%), Positives = 147/339 (43%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     L+         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   LAALVLLPTFSYAATVLTTPPELNNKSYVLMDYETGQILASKNENEHLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L + +      + ++++A        S        T T+   L+ +IV+S ND +
Sbjct: 67  IIEQKLLKGELTEGEQVRMNESAWCRGSSSESCMYVPLNGTATVLEMLRGIIVQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K LG+  THFMN+ G+   GHY++A+DMAIL+  I  D
Sbjct: 127 KAMAEHVAGNEGTFAHMMNQEAKRLGMVNTHFMNSTGLPAEGHYSSAKDMAILAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTSEAGYCLTTSSKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE-- 294
           +VI G    N R   + +LL+ GF N                  +    +     ++E  
Sbjct: 247 SVIFGTTSVNERANQTRTLLAWGFSNFETVNVQPANQVLAKAKVWFGKENEVQIGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     +       +K  ++   +
Sbjct: 307 NVTMPKGQADKIKTQLVV---QPKLNAPLQKGQVVGKLV 342


>gi|209919474|ref|YP_002293558.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli SE11]
 gi|209912733|dbj|BAG77807.1| penicillin binding protein 6 [Escherichia coli SE11]
          Length = 390

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|312973749|ref|ZP_07787921.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 1827-70]
 gi|310332344|gb|EFP99579.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 1827-70]
          Length = 390

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 150/340 (44%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L+ THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLNDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|168229376|ref|ZP_02654434.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472812|ref|ZP_03078796.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194459176|gb|EDX48015.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335852|gb|EDZ22616.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
          Length = 390

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 353


>gi|313650258|gb|EFS14670.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri 2a str.
           2457T]
 gi|332759746|gb|EGJ90049.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri
           4343-70]
 gi|332760581|gb|EGJ90870.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri
           2747-71]
 gi|332763049|gb|EGJ93294.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-671]
 gi|332768006|gb|EGJ98192.1| penicillin-binding protein 6 [Shigella flexneri 2930-71]
 gi|333007039|gb|EGK26534.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-218]
 gi|333020974|gb|EGK40232.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-304]
          Length = 321

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 93/295 (31%), Positives = 142/295 (48%), Gaps = 7/295 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           LI+V+LGA     R   S  LL+ GF        I        Q+    +   ++
Sbjct: 257 LISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKIEVN 311


>gi|297180033|gb|ADI16258.1| d-alanyl-d-alanine carboxypeptidase [uncultured bacterium
           HF0010_16H03]
          Length = 384

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 6/335 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L+ + ++ L     F+  A    L  Y L++ NT  VIAE        PAS+TK+M
Sbjct: 1   MKKLLIPLLLSNLIYAQSFVPDAPELNLKSYILIEPNTNTVIAEFNSSSEIEPASMTKIM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T+YVV   +      L   + IS+ A     S    + G  +++ N LK +I++S ND +
Sbjct: 61  TSYVVADQIANGLISLEDQVLISEKAWRMGGSKMFIEAGKKVSISNLLKGIIIQSGNDAS 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAI+E    TE+ FV  MN  + +LG++ T F N+ G+    H+++A+D+A L+      
Sbjct: 121 VAISEYAGGTERGFVDLMNAYADSLGMNNTIFQNSTGLPDENHFSSAKDLATLTSNFIIK 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP     ++ K       K  N N  +     +DG+KTG T A+G+ +V SA +GD  LI
Sbjct: 181 FPDIYSLYKEKQFTFNNIKQLNRNKLLWRDESSDGVKTGHTEAAGYCLVGSAKRGDMRLI 240

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------E 294
            V+ G+   N R   S  LL  GF     +K +N   +    +       ++        
Sbjct: 241 TVVAGSDTDNNRFLASQRLLEYGFRFFATQKVLNANEEYKKIKIWGGVEQSLGIGVLEDV 300

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +   +    +       + + ++     + I  +
Sbjct: 301 SITLPRTSFKDLTVNYNYSNNIQAPIYAGQTIGTI 335


>gi|260868661|ref|YP_003235063.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O111:H- str.
           11128]
 gi|257765017|dbj|BAI36512.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O111:H- str.
           11128]
          Length = 388

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFY 281
           FN++ASAI G + LIAV++GA     R + +  LL  G  N T  + +        +  +
Sbjct: 241 FNLIASAIDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   + +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAPISAHQRVGEI 351


>gi|297181495|gb|ADI17682.1| d-alanyl-d-alanine carboxypeptidase [uncultured gamma
           proteobacterium HF0130_23I23]
          Length = 380

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/339 (27%), Positives = 153/339 (45%), Gaps = 9/339 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +   I    +  N+   +       +  Y L + NT  V+A    D P  PASLTKLM
Sbjct: 1   MNKIKFIFLTFLSINLSAAIPNPPDLGVGSYILYEPNTKKVLASFNADAPVEPASLTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T+YVV  ++KE    LT    IS NA + P S    ++ + + +   +K +I++S ND +
Sbjct: 61  TSYVVADYIKEDFIDLTDTPKISINAWKTPGSRMFIRESTKVPVSELIKGMIIQSGNDAS 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E+ F   MN  ++ LG+  T F NA G+    + T+A D+A+L+  +  +
Sbjct: 121 VALAEHVAGSEENFSYLMNEYARELGMENTSFNNASGLPDPLNVTSANDLAVLTGELIKN 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL---GADGMKTGFTCASGFNIVASAIQGDQ 237
           FP +  ++  K     G    N N  +         DG+KTG+T ++G+ +V SA++   
Sbjct: 181 FPDHYRHYSQKSFTYAGIAQKNRNQLLWRDNTSITFDGVKTGYTESAGYCLVGSAVKDGM 240

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNIS 293
            L+AV+LG+ D   R    ++L+  GF      K                   N    IS
Sbjct: 241 RLVAVVLGSEDDK-RFNDVSNLMVYGFRYFKTEKLFEKNEPLKSVQVIAGKKDNVNVGIS 299

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           E+V  T +     + + +   D  +       +      
Sbjct: 300 EDVVLTLQRDQRDSLRYEVTADT-TVLAPVNSMDKAGTV 337


>gi|23097466|ref|NP_690932.1| serine-type D-Ala-D-Ala carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
 gi|22775689|dbj|BAC11967.1| serine-type D-Ala-D-Ala carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
          Length = 447

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 74/355 (20%), Positives = 142/355 (40%), Gaps = 34/355 (9%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++  +ML+      +     +     L+D  TG V+    PD    PAS+TK+MT Y+V
Sbjct: 16  ILVFTSMLTATTTVQANELDLESESAILVDGETGKVLYAKNPDVALPPASMTKMMTEYLV 75

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTF----KKGSTMTLDNALKLLIVKSANDIAV 121
           +  ++       T   IS        +NS      ++    T+    + + + S N   +
Sbjct: 76  WEAIENGDITWDTTTEISDYPYSISANNSFSGVGLRQQQEYTVKELYEAMAINSDNATTI 135

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTA 167
           A+AE +  +E +FV+ MN   + +GL    F+N+ G+                  +  +A
Sbjct: 136 ALAELIAGSESEFVKMMNEKGEEMGLQEFKFVNSTGLDNEDLGDNYPEGTNPNDTNLLSA 195

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA---------VGTFLGADGMKT 218
           R  A+L + +  D+ + +    I   +  G+   N N+             + G DG+KT
Sbjct: 196 RSAALLGYHLVNDYEEALEISSIPQTDFGGQTINNWNYMLPHEGDNLASYYYEGVDGLKT 255

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           GFT  +G++   +A +  Q LI V++       R + +A LL  GF N  + +  +   +
Sbjct: 256 GFTDLAGYSFTGTAERNGQRLITVVMKTGSETERFEETAKLLDYGFSNFENTELFSAGYQ 315

Query: 279 -------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                     +        ++ + V    K        ++   D++    D E +
Sbjct: 316 EEGHETIPVAKGKEDQVSISLQDSVSVPIKADEKDLYHLEYNIDQDRLNEDGELV 370


>gi|293415304|ref|ZP_06657947.1| dacD [Escherichia coli B185]
 gi|291432952|gb|EFF05931.1| dacD [Escherichia coli B185]
 gi|323168855|gb|EFZ54535.1| D-alanyl-D-alanine carboxypeptidase dacD [Shigella sonnei 53G]
          Length = 390

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|315181925|gb|ADT88838.1| D-alanyl-D-alanine carboxypeptidase [Vibrio furnissii NCTC 11218]
          Length = 390

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 96/335 (28%), Positives = 148/335 (44%), Gaps = 7/335 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  A        +          Y L+D NTG V+ E+  +   NPASLTKLMT+YV   
Sbjct: 17  LLSATSFAAPIVVPNPPQLSAKGYVLMDYNTGQVLVEHNANEKMNPASLTKLMTSYVAGQ 76

Query: 68  FLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            +K      T  +TIS+ A        S    + G+++ + +  + LIV+S ND +VAIA
Sbjct: 77  EMKRGNIKPTDQVTISQKAWAKNFPDSSKMFIEVGTSVNMMDLYRGLIVQSGNDASVAIA 136

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E  FV  MN+ ++ LGL+ T F N HG+   G YTT  D+A L+  I  D P+ 
Sbjct: 137 EHVAGSENAFVDLMNSWAQRLGLNNTAFTNPHGLDSDGLYTTPYDIAKLAQAIIRDLPEI 196

Query: 185 MHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              +        G    N N       +  DGMKTGFT  +G+++V SA  G+  LI+ +
Sbjct: 197 YPIYSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGFTSGAGYSLVTSATNGNMRLISAV 256

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +GA    +R   S  LLS GF                  +    E  +++  V  T    
Sbjct: 257 MGANSMKSRESDSKQLLSYGFRFFDTVAPHKQGETIENARVWMGERDDLAIGVAQTTYLT 316

Query: 304 INYNTQMKEAKDKE---SHFIDFEKITLLKNKITK 335
           +N     + +   E         ++  ++   I +
Sbjct: 317 VNKGEMSQLSGLIELDRDLKAPIQQGDMVGKVIYQ 351


>gi|253773059|ref|YP_003035890.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161999|ref|YP_003045107.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli B str.
           REL606]
 gi|297519533|ref|ZP_06937919.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli OP50]
 gi|242377656|emb|CAQ32416.1| DD-carboxypeptidase, penicillin-binding protein 6b [Escherichia
           coli BL21(DE3)]
 gi|253324103|gb|ACT28705.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973900|gb|ACT39571.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli B str. REL606]
 gi|253978094|gb|ACT43764.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli BL21(DE3)]
          Length = 388

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 91/351 (25%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + +        +  +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   + +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAPISAHQRVGEI 351


>gi|206559102|ref|YP_002229862.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia cenocepacia
           J2315]
 gi|198035139|emb|CAR51013.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
           precursor) [Burkholderia cenocepacia J2315]
          Length = 436

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 87/342 (25%), Positives = 149/342 (43%), Gaps = 14/342 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 61  FTGAPATYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 120

Query: 69  LKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   +T S          S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 121 LDKKKISMEQIVTPSDAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 180

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN+ +  LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 181 VGGSEGQFVTLMNDEAARLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYG 240

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+GF ++ASA +      G + L+
Sbjct: 241 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGFCLIASAKRAIPGVDGQRRLV 300

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G    N R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 301 SVMMGEQKENDRTQDSMKMLNYGYSAFDSVRLFKGGQAISTPRIYKGKDNTVQVGVKGDQ 360

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +       T++       +   + +++  +K     K
Sbjct: 361 WATVPRGLGDKVKTEVDVNAPLIAPLAEGQQVGTVKIVADGK 402


>gi|148255490|ref|YP_001240075.1| putative Serine-type D-Ala-D-Ala carboxypeptidase [Bradyrhizobium
           sp. BTAi1]
 gi|146407663|gb|ABQ36169.1| putative Serine-type D-Ala-D-Ala carboxypeptidase [Bradyrhizobium
           sp. BTAi1]
          Length = 384

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 9/313 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
             P   L++ N+G V+ E   D    P+S+ KLMTA VVF+ +KE    L     IS+NA
Sbjct: 22  DAPTAILMEANSGSVLFEKNADELRAPSSMMKLMTAEVVFNAVKEGTIKLNDEYRISENA 81

Query: 87  SEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV-QHMNN 140
                     S       S +++ + L   I++S ND  +A+AE +   EK F   +M  
Sbjct: 82  WRRGGAPSGGSTMFAALNSKVSVSDLLHGAIIQSGNDACIALAEGMAGNEKIFAADYMTK 141

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ LGL+ + F N++G+   G+  T R++A+L+  I  DFP++   F  K       + 
Sbjct: 142 RARELGLTKSTFANSNGLPDPGNKMTVRELAMLARHIILDFPEFYKIFGEKEFTWNKIRQ 201

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +    GADG+KTGFT   G+ +V SA+Q    LI V+ G  D   R   +  +L
Sbjct: 202 QNRNPLLNAMEGADGLKTGFTKEGGYGMVGSAVQNGTRLIVVVNGLEDPEDRATEAKKML 261

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE--- 317
             GF N   R          Y +    E  ++        K ++  N   K         
Sbjct: 262 EWGFRNFETRTLFAADQPIGYAKVFGGESRSVKLSSPVPVKVMVQKNGGDKLIARIVYSG 321

Query: 318 SHFIDFEKITLLK 330
                 E    + 
Sbjct: 322 PVRAPVEPGQKVG 334


>gi|170691583|ref|ZP_02882748.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia graminis
           C4D1M]
 gi|170143788|gb|EDT11951.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia graminis
           C4D1M]
          Length = 409

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 156/340 (45%), Gaps = 15/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V++   ++++               + L+D  +  V+A   PD    PASLTKLMTAY+V
Sbjct: 30  VVLPATLVASTAFAQVPPPAVNARSWVLVDATSNQVLASGNPDERVEPASLTKLMTAYLV 89

Query: 66  FSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           F  L+ KK  +   +T  +         S    +    +T+ + +  +IV+S ND A+A+
Sbjct: 90  FEALQTKKITMDQTVTPGEAVRRVRTDESRMFIEANKPVTVHDLVYGMIVQSGNDAAIAL 149

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+A+LS R+  DFP 
Sbjct: 150 AELVGGSESQFVNMMNTEAQRLGMKHTHFADVNGMPDPQHYTTAGDLAVLSARLIRDFPD 209

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GD 236
           Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +         
Sbjct: 210 YYNIFSVKDFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPGTPDAS 269

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
           + L++V++G    + R + S  +L+ G+      +             Y+         +
Sbjct: 270 RRLVSVMMGETKEHDRVQDSLKMLNYGYSAYDTARLYKANQVVGTPRVYKGAQDTVQIGV 329

Query: 293 SEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +   +        Q+++     +   + +++   K
Sbjct: 330 KSDQYITVPKGMADKVKPQIEQIDPLIAPIANGQQVGTAK 369


>gi|322513157|ref|ZP_08066289.1| D-alanyl-D-alanine carboxypeptidase DacA [Actinobacillus ureae ATCC
           25976]
 gi|322121089|gb|EFX92912.1| D-alanyl-D-alanine carboxypeptidase DacA [Actinobacillus ureae ATCC
           25976]
          Length = 392

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 18/352 (5%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L     + A+A         +      A       Y L+D N+G+V+A   PD   
Sbjct: 1   MKKTLFKSVGLCALAFSQFAVADANVDFGISAPQLNAQSYILMDYNSGNVLASLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MT+YVV   LK+ K   +  +T+++N+                + +++++ +
Sbjct: 61  YPASLTKMMTSYVVGDALKQGKVKNSDMVTVTENSWAQKFPGSSLMFLDLNTQVSVEDLM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LI+ S ND AVA+AE    +++ F+  MN  ++  GL  THF   HG+ +   Y++AR
Sbjct: 121 RGLIIVSGNDAAVALAEHTSGSQQAFIDQMNKFAQQFGLKNTHFTTVHGLDEPNQYSSAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   I  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGAHIIRDQPEEYKIYAEKEFKYNIKKPQPNRNGLLWDKTMNVDGMKTGHTSQAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQ 282
           N+VASA   +  LI+V++G      R   S  LL  GF N    K +        +  Y 
Sbjct: 241 NLVASATNSNTRLISVVMGVGTYKGREVESKKLLQWGFANFETIKSLPAGQAVSEQSVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                      ++   T  +      + +   ++++      K  ++   I 
Sbjct: 301 GEADKVQLGSIQDSFVTVPKGKASELKARYELERKNLEAPLVKGQVIGKVIY 352


>gi|308186017|ref|YP_003930148.1| D-alanine carboxypeptidase [Pantoea vagans C9-1]
 gi|308056527|gb|ADO08699.1| D-alanine carboxypeptidase [Pantoea vagans C9-1]
          Length = 420

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 149/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++  V  +IA ++              +          Y L+D N+G V+AE   D   
Sbjct: 27  LKRLTVGSLIAFSLSHAAIADDVNLKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 86

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+  +A                K G  + + 
Sbjct: 87  DPASLTKMMTSYVIGQAVKAGKIHQDDMVTVGPDAWATGNPVFKGSSLMFLKPGDRVPVS 146

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K +GL  THF   HG+   G Y+
Sbjct: 147 QLTRGIVLQSGNDACVAMADYVAGSQDAFVNLMNNYVKAIGLQNTHFGTVHGLDAEGQYS 206

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P+    ++ K       +  N N     T L  DG+KTG T ++
Sbjct: 207 SARDMALIGQALIRDVPEEYAVYKEKEFTFNNIRQMNRNGLLWDTNLNVDGIKTGHTNSA 266

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 267 GYNLVASATEGQMRLISAVMGGHTFKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPV 326

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++   T       + +              +K  ++ + 
Sbjct: 327 WFGDNDRVQLGVEKDAYLTIPRGRMKDLKASYVLTNTELHAPLKKNQVVGSI 378


>gi|242238535|ref|YP_002986716.1| D-alanyl-D-alanine carboxypeptidase fraction A [Dickeya dadantii
           Ech703]
 gi|242130592|gb|ACS84894.1| Beta-lactamase [Dickeya dadantii Ech703]
          Length = 403

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/351 (25%), Positives = 147/351 (41%), Gaps = 20/351 (5%)

Query: 2   RQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++ ++   + +  + F           +          Y L+D N+G V+AE   D   N
Sbjct: 11  KRIVLGTLLVLGVSAFSHAEDINLKTMIPAVPDIDAEAYILIDYNSGKVLAEKNADVRRN 70

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS------EYPPSNSTFKKGSTMTLDN 106
           PASLTK+MT+YV+   +K  K      +TI K+A           S    K G  + +  
Sbjct: 71  PASLTKMMTSYVIGQAIKAGKINPNDIVTIGKDAWATGNPDFQGSSLMFLKPGDRVPVHM 130

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             K +I++S ND  VA+A+ +  ++  F+  MN   K+LGL  T F   HG+   G Y++
Sbjct: 131 LNKGIILQSGNDACVAMADYVAGSQDAFISLMNGYVKSLGLQNTQFKTVHGLDAEGQYSS 190

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           ARDMA++   +  D P     ++ K       +  N N     + L  DG+KTG T ++G
Sbjct: 191 ARDMALIGQALIRDVPNEYATYKEKEFTFNNIRQMNRNGLLWDSSLSVDGIKTGHTASAG 250

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+VASA +G   LI+ +LG      R   S  LL+ GF        +        +  +
Sbjct: 251 YNLVASATEGQMRLISAVLGGRTFKGRESESKKLLTWGFRFFETVAPLKADKEFASEPVW 310

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             N       + ++   T       + +     +         K  ++   
Sbjct: 311 FGNADRVSLGVEKDAYITIPRGRMKDLKASYVLNNTELHAPLAKNQVVGTI 361


>gi|294650880|ref|ZP_06728227.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292823298|gb|EFF82154.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 397

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 14/338 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S     LS         Y L+D  TG ++A    D    PAS+TK+MT++++   L + 
Sbjct: 31  FSYAATVLSAPPELNNKSYVLMDYETGQILAAKNEDEKLAPASMTKMMTSFIIEQKLLQG 90

Query: 73  KAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K      + ++++A     S           T T+   L+ +IV+S ND + A+AE +  
Sbjct: 91  KLTEDEHVRMNESAWCRGSSAESCMYVPLNGTATVLEMLRGIIVQSGNDASKAMAEHIAG 150

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
            E  F   MN  +K LG++ T+F+N+ G+   GHY+TA+DMAIL+  I  D  +Y   + 
Sbjct: 151 NEGTFAHMMNQEAKRLGMTNTNFVNSTGMPAEGHYSTAKDMAILAQHIIKDSSKYYPIYS 210

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            K     G K  N N  + T    DG+KTG T  +GF +  S+ +G   LI+VI G    
Sbjct: 211 EKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTSEAGFCLTTSSKRGPMRLISVIFGTPSM 270

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE--EVCTTQKEI 303
           N R   + +LL+ GF N                  +          ++E   V   + + 
Sbjct: 271 NERANQTRALLAWGFANFETANVQPANQAIAKAKVWFGKEDEVQIGLAENFNVTMPKGQA 330

Query: 304 INYNTQMKEAKDKESHFIDFEKITLL-----KNKITKK 336
               TQ+       +     + I  L        I +K
Sbjct: 331 DKIKTQLVVQPQLNAPLAQGQVIGKLVASLDGKVIAEK 368


>gi|148975180|ref|ZP_01812104.1| D-alanyl-D-alanine carboxypeptidase [Vibrionales bacterium SWAT-3]
 gi|145965104|gb|EDK30354.1| D-alanyl-D-alanine carboxypeptidase [Vibrionales bacterium SWAT-3]
          Length = 417

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 10/343 (2%)

Query: 2   RQFLVIIAMAMLSNIFPF-LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R    ++   M  + F              Y L+D  +G +IAE        PASLTKLM
Sbjct: 27  RALACLLFAGMSVSSFAVVTPNPPELAAKGYVLMDFQSGSIIAEQNSRAILAPASLTKLM 86

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           TAYVV   +K  +      +++S+NA        S    + G  +++ N +K +IV+S N
Sbjct: 87  TAYVVGQEIKAGRLTWQDKVSVSENAWSAKFSESSKMFIQPGDEISVSNLMKGVIVQSGN 146

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D +VA+AE +  +E+ FV  MN  +K+LGL  T+F+NAHG+   G  T+  DMAIL   I
Sbjct: 147 DASVALAEHIAGSEQAFVSLMNGWAKSLGLQDTNFVNAHGLDGEGIQTSPLDMAILMKSI 206

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             D P     +Q +          N N       +  DG KTG+T  +G+++V+SA +G 
Sbjct: 207 IRDVPDVYALYQERRFTWNKITQYNRNKLLWDKSINVDGGKTGYTENAGYSLVSSATEGK 266

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNI 292
             LI+V++G      R   S +LLS GF     ++ +           ++ N       I
Sbjct: 267 MRLISVVMGTTSPQARTSASKNLLSYGFRFYDTKQVMQEDRIESQVRVWKGNTEQVGAKI 326

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +E+   T    +  ++  K     E      E+   +   + K
Sbjct: 327 AEDAYLTMPRGL-VDSLQKSVVMTEPLLAPIEQGAEVGQVVWK 368


>gi|71279808|ref|YP_268450.1| D-alanyl-D-alanine carboxypeptidase [Colwellia psychrerythraea 34H]
 gi|71145548|gb|AAZ26021.1| D-alanyl-D-alanine carboxypeptidase [Colwellia psychrerythraea 34H]
          Length = 399

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 145/340 (42%), Gaps = 9/340 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F   I +   ++    +  A       + L+D  TG +IAE   D    PASLTK+MT+Y
Sbjct: 25  FSTAIVLIPAAHAITIIPDAPQINAKGFILIDYTTGKIIAEENADTQLAPASLTKIMTSY 84

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L+      T  + IS+ A        S    + G+ + +    + +IV S ND  
Sbjct: 85  IIGKELENGNIKNTDKVMISEKAWAKKFPDSSKMFIEVGTEVPVSLLNQGIIVASGNDAC 144

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E  F   MN  ++ LG+S++ F N+HG+    H TT RDMA L+  +  +
Sbjct: 145 VAMAEHIAGSESAFADLMNAHAEQLGMSSSFFENSHGLDSTSHMTTPRDMATLAIALIRE 204

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    ++ K       K  N N       L  DGMKTG T  +G+++V SA +GD  L
Sbjct: 205 VPEEYAIYKQKSFTYNNIKQYNRNGLLWDKSLNVDGMKTGHTSNAGYSLVTSATKGDMRL 264

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
           + V++G      R   S  LL+ GF             K      +  +  N    I  +
Sbjct: 265 VTVVMGTASERARKVESKKLLNYGFRFFETITPYKAGEKFIANRVWMGDKENVDLGIISD 324

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              T       N +     +++       K T++     +
Sbjct: 325 TPITIPRGQRKNLKANFELNQQ-LTAPLAKGTVVGTLFLQ 363


>gi|197264724|ref|ZP_03164798.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197242979|gb|EDY25599.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
          Length = 390

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVHDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLRDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 353


>gi|28897493|ref|NP_797098.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260876429|ref|ZP_05888784.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AN-5034]
 gi|28805705|dbj|BAC58982.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308091621|gb|EFO41316.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AN-5034]
 gi|328472498|gb|EGF43361.1| D-alanyl-D-alanine carboxypeptidase [Vibrio parahaemolyticus 10329]
          Length = 392

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++     + F     +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATFAQSAFASPVVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +I++S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVRDLNRGIIIQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  LG+  +HF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWANTLGMKNSHFANVHGLDNSELYSTPYDMALLGKALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPDEYRVYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  D N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKVWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE       K  ++     +
Sbjct: 315 DTYVTLPRGEAKNLKASFVLEKE-LEAPINKGDVVGKLYYQ 354


>gi|290476200|ref|YP_003469100.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Xenorhabdus bovienii SS-2004]
 gi|289175533|emb|CBJ82336.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Xenorhabdus bovienii SS-2004]
          Length = 402

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 85/351 (24%), Positives = 147/351 (41%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++   + IA+A  ++ F                     Y L+D N+G ++AE   D   +
Sbjct: 10  IKNATLGIALATSASAFANTDDNFKTMIPGVPQTDAEAYILIDYNSGKILAEKNSDIRRD 69

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTK+MT+YV+   +K  K      +T+ K+A                K G  +++  
Sbjct: 70  PASLTKMMTSYVIGQAIKSGKIGPNDTVTVGKDAWATGNPVFKGSSLMFLKPGDQVSVAM 129

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + + ++S ND  VA+A+ +  ++  FV  MN   +NLGL  THF   HG+   G Y++
Sbjct: 130 LSRGINLQSGNDACVAMADYVAGSQDAFVNLMNKYVQNLGLQNTHFETVHGLDAAGQYSS 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A DMA++   +  D P     ++ K         PN N       L  DG+KTG T  +G
Sbjct: 190 AHDMALIGQALIRDVPDEYAIYKEKEFTYNNIHQPNRNGLLWDKSLNVDGIKTGHTSGAG 249

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+V+SA + +  LI+V++G+     R   S  LL+ GF        +        +  +
Sbjct: 250 YNLVSSATESNMRLISVVMGSPTFKGRETDSKKLLTWGFRFFETVSPLQVGKEFASEPVW 309

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +       + + V  T       + +     +         K  ++   
Sbjct: 310 FGDADKVQLGVDKNVYLTIPRGRLKDLKASYVLNNTELHAPLAKDQVVGTI 360


>gi|91792211|ref|YP_561862.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella denitrificans
           OS217]
 gi|91714213|gb|ABE54139.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Shewanella denitrificans OS217]
          Length = 428

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 146/318 (45%), Gaps = 10/318 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +  A +     Y L+D ++G VIAE       NPASLTK+MT+YV+   LK     L   
Sbjct: 67  IPDAPSVAAKAYVLMDYHSGQVIAEGNSYESLNPASLTKMMTSYVIGHELKVGNISLEDE 126

Query: 80  ITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +TI+KNA        S    + G T+ +D+  + +I++S ND  VA+AE +  TE  FV 
Sbjct: 127 VTITKNAWSKNFPDSSKMFIEVGKTVKVDDLNRGIIIQSGNDACVAMAEHIAGTEGAFVD 186

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN+ SK LG++ ++F N+HG+    H TTA DMA+L   +  D PQ    +  K     
Sbjct: 187 LMNSWSKQLGMNDSYFENSHGLDSENHKTTAYDMALLGAALIRDVPQEYRVYAEKSFTYN 246

Query: 197 GKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           G K  N N  +       DG+KTG T  +G+N+VASA      LI+V+LG    + R   
Sbjct: 247 GIKQYNRNGLLWDNSLNVDGIKTGHTSGAGYNLVASATSDGMRLISVVLGTSSESARKAE 306

Query: 256 SASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKEIINYNTQ 309
           S  LL+ GF                    +  +       ++ +  +   + +  +    
Sbjct: 307 SKKLLNYGFRFFETISPYKAGDTFTNHAIWYGDKDTVNLGVTTDTAITLGRGKAKDLQAN 366

Query: 310 MKEAKDKESHFIDFEKIT 327
            +  K   +     E + 
Sbjct: 367 FELTKQLTAPLAKGEVVG 384


>gi|254511152|ref|ZP_05123219.1| D-alanyl-D-alanine carboxypeptidase family protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534863|gb|EEE37851.1| D-alanyl-D-alanine carboxypeptidase family protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 448

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 104/294 (35%), Positives = 151/294 (51%), Gaps = 6/294 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M  FL+     ++      L+           ++D  TG V+     D   +PASLTK+M
Sbjct: 1   MGLFLIAFLWLLVFAPLKGLAAP-----YAAMVIDARTGEVLHSRNADTRLHPASLTKMM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  ++  +  L TP+ I+K AS  PPS    + G T+     ++   VKSAND A
Sbjct: 56  TLYIAFEAVRNGEITLDTPVRITKKASSEPPSKLGLRTGQTIQFRYLIRAAAVKSANDAA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI  ++  +E  F + M  T+K +G+S T F NAHG+ + GH +TARDM  L   +  D
Sbjct: 116 TAIGIAISGSEAAFARRMTRTAKAMGMSRTTFKNAHGLTETGHLSTARDMTTLGRHLLYD 175

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +PQY + F  +      K  PNTN   +  + GADG+KTG+T A+GFN+VASA + D+ +
Sbjct: 176 YPQYYNLFSRQSTHAGIKTVPNTNRRLLAAYKGADGIKTGYTRAAGFNLVASAKRKDERI 235

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           IA + G     +RN   A LL MGF     R  I    +  Y  N    V  ++
Sbjct: 236 IATVFGGKSGASRNARVAELLDMGFRRAPSRAPIRKPARPAYAGNAGLGVTQVA 289


>gi|148977058|ref|ZP_01813704.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrionales bacterium
           SWAT-3]
 gi|145963718|gb|EDK28979.1| putative D-alanyl-D-alanine carboxypeptidase [Vibrionales bacterium
           SWAT-3]
          Length = 373

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 89/326 (27%), Positives = 139/326 (42%), Gaps = 9/326 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
                  +    +     Y L+D N+G V+ E       NPASLTKLMT+YV    +K  
Sbjct: 6   AIAAPSIVPAPPSLGAKGYVLIDFNSGDVLVEKNAHTKLNPASLTKLMTSYVAGQEMKRG 65

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                  + IS+NA        S    +  + + + +  + LI++S ND +VAIAE +  
Sbjct: 66  NISADDKVRISENAWAKNFPDSSKMFIEVNTDVAMMDLYRGLIIQSGNDASVAIAEQVAG 125

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++  FV  MN+ + +L L  THF NAHG+     Y+T  D+A+L   I  D P     + 
Sbjct: 126 SQDAFVDLMNSWATSLKLENTHFANAHGLDAEDLYSTPYDIALLGRAIIKDLPDVYGLYS 185

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            +     G    N N       L  DGMKTG+T  +G+++ +SA QG+  LIAV++GA  
Sbjct: 186 ERSFSYNGITQHNRNGLLRDRSLTVDGMKTGYTSGAGYSLASSATQGEMRLIAVVMGASS 245

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEII 304
             +R   S  LLS GF                 +  +  +       ++E+   T  +  
Sbjct: 246 VKSRESDSKQLLSYGFRFFDTLNVHQGGDQVAEEKVWFGSQDTLKLGVAEDTFITLPKSD 305

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLK 330
           +         + E       +   L 
Sbjct: 306 SKKLTASIELNSE-LKAPIAEGQTLG 330


>gi|156973523|ref|YP_001444430.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi ATCC BAA-1116]
 gi|156525117|gb|ABU70203.1| hypothetical protein VIBHAR_01214 [Vibrio harveyi ATCC BAA-1116]
          Length = 392

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  +  + F     +  A       Y L+D N+G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATIAQSAFASPVVVPDAPQIAAKGYVLMDYNSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +I++S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVHDLNRGIIIQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  LG+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWANTLGMKNTHFANVHGLDNPNLYSTPYDMALLGKALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPDEYRIYSDKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  D N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKVWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE      +K  ++     +
Sbjct: 315 DTYVTLPRGEAKNLKASFVLEKE-LEAPIKKGDVVGKLYYQ 354


>gi|182678513|ref|YP_001832659.1| Serine-type D-Ala-D-Ala carboxypeptidase [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182634396|gb|ACB95170.1| Serine-type D-Ala-D-Ala carboxypeptidase [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 394

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 16/348 (4%)

Query: 2   RQFLVI--IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           R+ L+I  +    L+      +       P   L++  TG V+ E  PD P  PAS  K+
Sbjct: 6   RRILLIPFLLSGFLAGPIAARAQGIDTSAPNVILIEAETGGVLFEKNPDAPVIPASTAKI 65

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEY-----PPSNSTFKKGSTMTLDNALKLLIVK 114
           MTA +VF  L+E +  L     IS+ A          S+      S + +++ ++ L++ 
Sbjct: 66  MTAELVFQNLREGRIHLDDTFLISETAWRQGGAPSRGSSMYAALNSHVRVEDLIRGLVID 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND A+A+AE L  +E  F   M   ++ LGL  + F NA G        TARDMA L+
Sbjct: 126 SGNDAAIALAEGLAGSEGAFATLMTKRARELGLDHSVFTNAWGRGDPDQLVTARDMARLA 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T +P Y  YF  K       +  N N  +    GADG+KTG   ASG+ +V SA+Q
Sbjct: 186 AHVITTYPDYYKYFGEKEFTWNKIRQTNRNPLLTMDFGADGLKTGNIDASGYGLVGSAVQ 245

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-- 292
             + LI  + GA +   R   +  L   GF + T +            +       ++  
Sbjct: 246 NGERLILALYGAKNAKERADEARRLFLWGFRSFTTKTVYKANETIGTARVFGGAKTDVDL 305

Query: 293 ----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 ++         +  ++             E+   +   I ++
Sbjct: 306 VAHRDIKLLIPHLGGEKFTGKIVYT---GPLPAPVEEGQQVGQLIIRR 350


>gi|292487601|ref|YP_003530473.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Erwinia amylovora
           CFBP1430]
 gi|291553020|emb|CBA20065.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Erwinia amylovora
           CFBP1430]
          Length = 411

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    + +A+  N+  +         +          Y L+D N+G V+AE   D   
Sbjct: 17  LKRLTAGMLIALSLNVVAYADDVNIKTMIPGVPEIDAEAYILIDYNSGKVLAEKNADARR 76

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 77  DPASLTKMMTSYVIGQAIKAGKIHQDDRVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 136

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 137 QLTRGIVLQSGNDACVAMADYVAGSQDTFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 196

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T ++
Sbjct: 197 SARDMALIGRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTNLNVDGIKTGHTESA 256

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           G+N+VASA +G    LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 257 GYNLVASATEGQQMRLISTVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEP 316

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  N       + ++V  T       + +              +K  ++   
Sbjct: 317 VWFGNSDRVQLGVEKDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVIGTI 369


>gi|253687572|ref|YP_003016762.1| Beta-lactamase [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|261822396|ref|YP_003260502.1| D-alanyl-D-alanine carboxypeptidase fraction A [Pectobacterium
           wasabiae WPP163]
 gi|251754150|gb|ACT12226.1| Beta-lactamase [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|261606409|gb|ACX88895.1| Beta-lactamase [Pectobacterium wasabiae WPP163]
          Length = 403

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 15/344 (4%)

Query: 4   FLVIIAMAML----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            LVI A +       N+   +          Y L+D N+G V+AE   D   +PASLTK+
Sbjct: 18  LLVISASSFAYAEDINLKTMIPGVPQIDAESYILIDYNSGKVLAEMNADTRRDPASLTKM 77

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIV 113
           MT+YV+   +K  K      +T+ K+A                K G  + +    + +I+
Sbjct: 78  MTSYVIGQAIKSGKISPNDIVTVGKDAWATGNPTFQGSSLMFLKPGDRVPVSQLNRGIIL 137

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+A+ +  ++  FV  MN   K LGL  T+F   HG+   G +++ARDMA++
Sbjct: 138 QSGNDACVAMADYVAGSQDAFVNLMNGYVKALGLQNTNFETVHGLDAPGQFSSARDMALI 197

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
              +  D P+    ++ K       + PN N     + L  DG+KTG T ++GFN+VASA
Sbjct: 198 GQALIRDVPEEYATYKEKEFTFNNIRQPNRNGLLWDSSLNVDGIKTGHTSSAGFNLVASA 257

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNE 288
            +G   LI+ +LG  +   R   S  LL+ GF        +        +  +  +    
Sbjct: 258 TEGQMRLISAVLGGRNAKGRESESKKLLTWGFRFFETVAPLKAGKEFASEPVWFGDSDRV 317

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + ++   T       + +     D         K  ++ + 
Sbjct: 318 ALGVEKDAYLTIPRGRMKDLKASYVLDNTELHAPLAKNQVVGSI 361


>gi|310642625|ref|YP_003947383.1| d-ala-d-ala carboxypeptidase dacf; serine peptidase; merops family
           s11 [Paenibacillus polymyxa SC2]
 gi|309247575|gb|ADO57142.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Paenibacillus polymyxa SC2]
          Length = 397

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 89/360 (24%), Positives = 149/360 (41%), Gaps = 26/360 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFL------------------SIAETNKLPYYTLLDTNTGHVI 42
           M++ +V   +A L  +                      +     +     L+D +TG VI
Sbjct: 1   MKKKVVAFILACLVALTAVPVGGWAEESRPESKTKVGSAAELAPEALSAILMDADTGTVI 60

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
            E        PAS+TK+MT  +    + + K  LT  +  S+ AS    S    + G  M
Sbjct: 61  YEKNSREKLPPASITKIMTMLLTMEAIHDGKLKLTDKVRASEYASSMGGSQIFLEPGEEM 120

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+D  LK + + S ND +VA+AE +  +E+ FV+ MN   + LGL  THF N +G+    
Sbjct: 121 TVDEMLKGIAMASGNDASVAMAEKIAGSEQAFVEMMNAKVQQLGLKDTHFANCNGLPVEN 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGTFLGADGMKT 218
           HY++A D+A++S  +        +    +       +K     NTN  V  + GADG+KT
Sbjct: 181 HYSSAHDIAVMSRELLKYPQITKYTGAYQDYLRKSSVKPFWLVNTNKLVRFYTGADGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+T  + F + A+A +    ++AV+LG  +   RN   +S+    F   T +       K
Sbjct: 241 GYTSEAKFCLSATAKRDGLRVVAVVLGEPNTKIRNNEVSSMFDYAFSQYTMKSIYKPGEK 300

Query: 279 DFYQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               +     +P +  +         K+  N  T   E +   S          +   + 
Sbjct: 301 LGSVKVEKGVLPELEIQADRSYSVLVKKGGNKQTLRHELQLTPSLKAPVRVGDPVGKLVV 360


>gi|90424200|ref|YP_532570.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB18]
 gi|90106214|gb|ABD88251.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB18]
          Length = 418

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 11/317 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++ +TG V+ E   D    P+S+ KLMT  +VF  L++    LT    +S+
Sbjct: 55  DVDAPTAILVEASTGSVLYEKNADELRAPSSMMKLMTVELVFRALQQGDIKLTDQYQVSE 114

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           NA          S    +  S + +++ L+  IV+S ND  +  AE+L   E+ F + + 
Sbjct: 115 NAWRKGGAPAGNSTMFAEIHSRIAVEDLLRGAIVQSGNDACMVFAEALGGGERGFAELLT 174

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LGL+ + F N++G+   G+  + R++A L+  +   +P++   F  +       +
Sbjct: 175 KRARELGLAKSTFANSNGLPDPGNKMSVRELARLARHLIQTYPEFYKIFGEREFTWNKIR 234

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +    GADG+KTG+T   G+ +V SA+Q    LI VI G  D + R   +  L
Sbjct: 235 QTNRNPLLTMLDGADGLKTGYTKEGGYGMVGSAVQNGMRLIVVINGVEDIDDRASEAKKL 294

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-- 317
           L  GF N   R   N      Y +    E  ++        + ++  N   K        
Sbjct: 295 LEWGFRNFESRALFNPQDAVGYAKVFGGESRSVKLTSTEPVRVMVQKNGSDKLIARIVYS 354

Query: 318 ----SHFIDFEKITLLK 330
               +     + I ++K
Sbjct: 355 GPVRAPIGPGQPIGVIK 371


>gi|293446369|ref|ZP_06662791.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli B088]
 gi|291323199|gb|EFE62627.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli B088]
 gi|324119040|gb|EGC12929.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1167]
          Length = 390

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|254196217|ref|ZP_04902641.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei S13]
 gi|169652960|gb|EDS85653.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei S13]
          Length = 437

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 67  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 126

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 127 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 187 QFVNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 246

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 247 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 307 ETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIGTPRVYKGKSNNVQVGVKKDQFITVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 367 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 397


>gi|322833903|ref|YP_004213930.1| Beta-lactamase [Rahnella sp. Y9602]
 gi|321169104|gb|ADW74803.1| Beta-lactamase [Rahnella sp. Y9602]
          Length = 402

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 85/360 (23%), Positives = 150/360 (41%), Gaps = 28/360 (7%)

Query: 1   MR-----QFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIA 43
           M+     + +  +A   +  +    + A                   Y L+D N+G V+A
Sbjct: 1   MKLVNTSRLVKSLAFGTVITLSAASAYADDVNLKTMIPGVPQIDAEAYILIDYNSGKVLA 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFK 97
           E   D   +PASLTK+MT+YV+   +K  K   T  +T+  +A                K
Sbjct: 61  EMNADARRDPASLTKMMTSYVIGQSIKAGKISPTDIVTVGPDAWATGNPVFKGSSLMFLK 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
            G  + +    + +I++S ND  VA+A+ +  ++  FV  MNN   +LGL  THF   HG
Sbjct: 121 PGDRVPVSELNRGIILQSGNDACVAMADHVAGSQDAFVAIMNNYVNSLGLKNTHFGTVHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGM 216
           +   G Y++ARDMA++   +  D P+    ++ K       +  N N  +       DG+
Sbjct: 181 LDAAGQYSSARDMALIGQALIRDVPEEYATYKEKEFTFNNIRQMNRNGLLWDNSLNVDGI 240

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTG T ++G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +   
Sbjct: 241 KTGHTDSAGYNLVASATEGQMRLISAVMGGHTYKGREVESKKLLTWGFRFFETVSPLKAG 300

Query: 277 I----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +  +  +       + ++   T       + +     +        +K  ++ + 
Sbjct: 301 KEFASEPVWFGDTDRVALGVEKDAYLTIPRGRMKDLKASYVLNTPELHAPLQKNQVVGSI 360


>gi|307138677|ref|ZP_07498033.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H736]
 gi|331642633|ref|ZP_08343768.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli H736]
 gi|331039431|gb|EGI11651.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli H736]
          Length = 388

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + +        +  +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|89074975|ref|ZP_01161420.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium sp.
           SKA34]
 gi|89049214|gb|EAR54778.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium sp.
           SKA34]
          Length = 391

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 9/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            ++A A ++     +  A       Y L+D N+G ++A N       PASLTK+MT++V+
Sbjct: 16  TLLASATVAASPAVVPEAPQIAAKGYILVDYNSGKILAGNNEYEKLAPASLTKIMTSFVI 75

Query: 66  FSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K         + ISKNA        S    + G ++ + +  + +IV S ND  VA
Sbjct: 76  GQEIKNGNISPDDTVVISKNAWAKNFPGSSKMFLEVGKSVKVSDLNRGIIVDSGNDACVA 135

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +++ FV  MN  +KNLG+ +THF N HG+ +   YTT  D++IL+  +  D P
Sbjct: 136 MAEHVAGSQESFVDLMNGWAKNLGMKSTHFANVHGLDRPDLYTTPYDLSILTRSLIRDLP 195

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +  K     G    N N       +  DG+KTG T  +G+++V++A +G+  LI+
Sbjct: 196 NEFKIYDEKSFTYNGITQYNRNGLLWDKSMHVDGLKTGHTDNAGYSLVSTATEGNMRLIS 255

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVC 297
           V++G   +N R   S  LL+ GF                 +  +  +       ++E   
Sbjct: 256 VVMGTASKNARLAESKKLLNFGFRFYETLSPNKKDQTIETEKVWMGDTDTVNLGVTENTY 315

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            T       + +      KE       K  ++     +
Sbjct: 316 VTLPRSQAKDLKASFVLTKE-LKAPITKGEVVGKLTYR 352


>gi|67642413|ref|ZP_00441170.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|121598771|ref|YP_991575.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei SAVP1]
 gi|124385285|ref|YP_001027352.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449591|ref|YP_001082709.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei NCTC 10247]
 gi|126454122|ref|YP_001064741.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           1106a]
 gi|167003222|ref|ZP_02269012.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei PRL-20]
 gi|242314349|ref|ZP_04813365.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           1106b]
 gi|254176979|ref|ZP_04883636.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254202020|ref|ZP_04908384.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei FMH]
 gi|254207352|ref|ZP_04913703.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei JHU]
 gi|254357610|ref|ZP_04973884.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei 2002721280]
 gi|121227581|gb|ABM50099.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei SAVP1]
 gi|124293305|gb|ABN02574.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
           10229]
 gi|126227764|gb|ABN91304.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           1106a]
 gi|126242461|gb|ABO05554.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
           10247]
 gi|147747914|gb|EDK54990.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei FMH]
 gi|147752894|gb|EDK59960.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei JHU]
 gi|148026674|gb|EDK84759.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei 2002721280]
 gi|160698020|gb|EDP87990.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 10399]
 gi|238523562|gb|EEP87000.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|242137588|gb|EES23990.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           1106b]
 gi|243061219|gb|EES43405.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei PRL-20]
          Length = 437

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 67  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 126

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 127 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 187 QFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 246

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 247 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 307 ETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIGTPRVYKGKSNNVQVGVKKDQFITVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 367 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 397


>gi|312882711|ref|ZP_07742448.1| D-alanyl-D-alanine carboxypeptidase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369672|gb|EFP97187.1| D-alanyl-D-alanine carboxypeptidase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 392

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 9/339 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++    +        +  A       Y L+D ++G V+AE       +PASLTK+MT+YV
Sbjct: 17  VLATTASSAFASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMHTKLSPASLTKMMTSYV 76

Query: 65  VFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           +   L      L   +TISKNA        S    + G+++ ++   + +I++S ND  V
Sbjct: 77  IGQELARGNISLQDDVTISKNAWAKNFPESSKMFIEVGTSVKVEELNRGIIIQSGNDACV 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  +E  FV  MN  +  +G+  THF N HG+     Y+T  DMA+L   +  D 
Sbjct: 137 AMAEHIAGSEDAFVDLMNAWADTIGMKDTHFANVHGLDNPNLYSTPYDMALLGSALIRDV 196

Query: 182 PQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   L+
Sbjct: 197 PDEYRIYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGKMRLV 256

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEV 296
           AV++G  + N+R   S  LLS GF                 +  +  N       + ++ 
Sbjct: 257 AVVMGTKNANSRKSESKKLLSYGFRFFETVAPHKAGETFVEEKIWMGNKDTVALGLDKDT 316

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             T       + +     +KE      +K  ++     +
Sbjct: 317 YVTLPRGQAKSLKASFVLEKE-LEAPIKKGDVVGKLYYQ 354


>gi|331677915|ref|ZP_08378590.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli H591]
 gi|331074375|gb|EGI45695.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli H591]
          Length = 390

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPQIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|156977862|ref|YP_001448768.1| D-alanyl-D-alanine carboxypeptidase [Vibrio harveyi ATCC BAA-1116]
 gi|156529456|gb|ABU74541.1| hypothetical protein VIBHAR_06653 [Vibrio harveyi ATCC BAA-1116]
          Length = 388

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 92/343 (26%), Positives = 150/343 (43%), Gaps = 14/343 (4%)

Query: 6   VIIAMAMLSNIFPFL-----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + +A  +L  I               +   Y L+D  +G +IAE        PASLTKLM
Sbjct: 8   ITLACLLLQTISAPALAVVTPNPPQLQAKGYVLMDFQSGAIIAEQNARAGLAPASLTKLM 67

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           TAYVV   +K  +      +T+S+NA        S    +    +T+ N ++ +I++S N
Sbjct: 68  TAYVVGQEIKSGRLQWDDKVTVSENAWSAKFPDSSKMFIQPKDEITVANLMRGVIIQSGN 127

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+AE +   E  FV  MN  +  L L+ T+F+N+HG+   G  T+  DMA L   I
Sbjct: 128 DACVALAEHVAGGEGAFVALMNGWADKLSLNDTYFVNSHGLDSEGIQTSPNDMATLMQSI 187

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             D P+    +  K  +       N N       +  DG KTG+T  +G+++V+SA QG 
Sbjct: 188 INDVPEVYALYSEKVFKWNKITQYNRNKLLWDKSMDVDGGKTGYTSNAGYSLVSSAKQGK 247

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNI 292
             LI+V++G   + +R   S +LLS GF     ++             ++ N+S      
Sbjct: 248 MRLISVVMGTPSKQSRITQSKNLLSYGFRFYDTKQVAKQGEVQASAKVWKGNVSEIDLGF 307

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +++   T    +          + E       K  ++   + K
Sbjct: 308 AQDAYLTLPRSLTAGLDKSVVVN-EPLIAPIAKGDVVGKVVWK 349


>gi|167585315|ref|ZP_02377703.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ubonensis
           Bu]
          Length = 438

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 15/337 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK 
Sbjct: 68  TYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKKI 127

Query: 75  MLTTPITIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S          S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 128 SMEQIVTPSAAVRRVGTDESRMFIEADKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 187

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN+ +K LG+  THF + +G+    HYTTA D+A LS  +  DFPQY   F  K 
Sbjct: 188 QFVNMMNDEAKRLGMKGTHFADVNGMPDPNHYTTAGDLATLSAHLIRDFPQYYGIFSEKE 247

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-------DQSLIAVILG 245
            +    +  N N  +      DG+KTG T A+GF +++SA +         + L++V++G
Sbjct: 248 FKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGFCLISSAKRQMPGTADAPRRLVSVMMG 307

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    +  +  V   
Sbjct: 308 ETKESDRTQDSMKMLNYGYSAFDAVRLFKGGQAISTPRLYKGKSNNVQVGVKGDQWVTVP 367

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +       T+++      +   D + +  +K     K
Sbjct: 368 RGLGDKVKTEVEVNAPLIAPLADGQPVGTVKIVADGK 404


>gi|16765392|ref|NP_461007.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62180641|ref|YP_217058.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|167990972|ref|ZP_02572071.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168259641|ref|ZP_02681614.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|197251570|ref|YP_002147019.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|224583442|ref|YP_002637240.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|585694|sp|P37604|DACD_SALTY RecName: Full=D-alanyl-D-alanine carboxypeptidase dacD;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 6B; Short=PBP-6B; Flags:
           Precursor
 gi|16420593|gb|AAL20966.1| DD-carboxypeptidase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|62128274|gb|AAX65977.1| DD-carboxypeptidase, penicillin-binding protein 6b [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|197215273|gb|ACH52670.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|205330511|gb|EDZ17275.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205350814|gb|EDZ37445.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|224467969|gb|ACN45799.1| DD-carboxypeptidase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|261247276|emb|CBG25100.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994112|gb|ACY88997.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158623|emb|CBW18134.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913053|dbj|BAJ37027.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321224707|gb|EFX49770.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322715112|gb|EFZ06683.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130385|gb|ADX17815.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332988997|gb|AEF07980.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 390

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 353


>gi|50120239|ref|YP_049406.1| D-alanyl-D-alanine carboxypeptidase fraction A [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610765|emb|CAG74210.1| D-alanine carboxypeptidase [Pectobacterium atrosepticum SCRI1043]
          Length = 403

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 15/344 (4%)

Query: 4   FLVIIAMAML----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            LVI A +       N+   +          Y L+D N+G V+AE   D   +PASLTK+
Sbjct: 18  LLVISASSFAYAEDINLKTMIPGVPQIDAESYILIDYNSGKVLAEMNADTRRDPASLTKM 77

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIV 113
           MT+YV+   +K  K      +T+ K+A                K G  + +    + +I+
Sbjct: 78  MTSYVIGQAIKSGKISPNDIVTVGKDAWATGNPTFQGSSLMFLKPGDRVPVSQLNRGIIL 137

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+A+ +  ++  FV  MN   K LGL  T+F   HG+   G +++ARDMA++
Sbjct: 138 QSGNDACVAMADYVAGSQDAFVNLMNGYVKALGLQNTNFETVHGLDAPGQFSSARDMALI 197

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
              +  D P+    ++ K       + PN N     + L  DG+KTG T ++GFN+VASA
Sbjct: 198 GQALIRDVPEEYATYKEKEFTFNNIRQPNRNGLLWDSSLNVDGIKTGHTSSAGFNLVASA 257

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNE 288
            +G   LI+ +LG  +   R   S  LL+ GF        +        +  +  +    
Sbjct: 258 TEGQMRLISAVLGGRNAKGRESESKKLLTWGFRFFETVAPLKAGKEFASEPVWFGDNDRV 317

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + ++   T       + +     D         K  ++ + 
Sbjct: 318 ALGVEKDAYLTIPRGRMKDLKASYVLDNTELHAPLAKNQVVGSI 361


>gi|152969235|ref|YP_001334344.1| D-alanyl-D-alanine carboxypeptidase fraction A [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893699|ref|YP_002918433.1| D-alanyl-D-alanine carboxypeptidase fraction A [Klebsiella
           pneumoniae NTUH-K2044]
 gi|150954084|gb|ABR76114.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238546015|dbj|BAH62366.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 399

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 19/350 (5%)

Query: 2   RQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           R  +  +++A LS+            +  A       + L+D N+G V+AEN  D   +P
Sbjct: 8   RLLITALSVAALSSAARADDLNIKTMIPGAPQIDAESWILIDYNSGKVLAENNADSRRDP 67

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTK+MT+YV+   +K  K   +  +T+  +A                K G  + +   
Sbjct: 68  ASLTKMMTSYVIGQAMKAGKFKESDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQL 127

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           ++ + ++S ND  VA+A+ +  ++  FV  MNN    LGL  THF   HG+   G Y++A
Sbjct: 128 IRGINLQSGNDACVAMADYVAGSQDAFVSLMNNYVNALGLKNTHFQTVHGLDADGQYSSA 187

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGF 226
           RDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+
Sbjct: 188 RDMALIGQALIRDVPNEYSIYREKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGY 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQ 282
           N+VASA +G   LI+ ++G      R   S  LL+ GF        I        +  + 
Sbjct: 248 NLVASATEGQMRLISAVMGGRTFKGRESESKKLLTWGFRFFETVNPIKAGKEFASEPAWF 307

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +       + ++V  T       + +     +        +K  ++   
Sbjct: 308 GDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNNTELHAPLQKNQVVGTI 357


>gi|167617731|ref|ZP_02386362.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis Bt4]
          Length = 381

 Score =  202 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 15/329 (4%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK  +
Sbjct: 13  APGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKITM 72

Query: 77  TTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
              +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E +F
Sbjct: 73  EQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEAQF 132

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K   
Sbjct: 133 VNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLATLSTHLIRDYPDYYNIFSVKEFT 192

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGAL 247
               K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G  
Sbjct: 193 YNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRSLPGAADATRRLVTVMMGET 252

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTTQK 301
             + R + S  +L+ G+      +             Y+   +N    + ++  +   + 
Sbjct: 253 KESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIDTPRVYKGKSNNVQVGVKKDQFITVPRG 312

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLK 330
                  ++       +   D + +  +K
Sbjct: 313 LADKVKPEVALNAPLIAPLADGQAVGSVK 341


>gi|327393100|dbj|BAK10522.1| penicillin-binding protein 5 precursor DacA [Pantoea ananatis
           AJ13355]
          Length = 410

 Score =  202 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 150/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++  V  +IA ++              +          Y L+D N+G V+AE   D   
Sbjct: 17  LKRLTVGSLIAFSLSHAAIADDVNLKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 76

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ ++A                K G  + + 
Sbjct: 77  DPASLTKMMTSYVIGQAVKAGKIHQDDIVTVGQDAWATGNPVFKGSSLMFLKPGDRVPVS 136

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 137 QLTRGIVLQSGNDACVAMADYVAGSQDAFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 196

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P+    ++ K       +  N N     T L  DG+KTG T ++
Sbjct: 197 SARDMALIGQALIRDVPEEYAVYKEKEFTFNNIRQMNRNGLLWDTSLTVDGIKTGHTASA 256

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 257 GYNLVASATEGQMRLISAVMGGHTFKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPV 316

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  N       + ++   T       + +              +K  ++ + 
Sbjct: 317 WFGNSDRVQLGVEKDAYLTIPRGRMKDLKASYVLTNTELHAPLKKNQVVGSI 368


>gi|303241570|ref|ZP_07328070.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetivibrio
           cellulolyticus CD2]
 gi|302590888|gb|EFL60636.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetivibrio
           cellulolyticus CD2]
          Length = 403

 Score =  202 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 31/367 (8%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAET---------------------NKLPYYTLLDTN 37
           +R+ L   +I + +++N+F   + AE                       K     L+D  
Sbjct: 2   IRKVLFRHLIVICIVANLFSVFAFAEEERPVYNPNTVNSIMASTSISELKAKASVLMDAY 61

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG V+ EN  +     AS+TK+M+  +    +   K  L   +T S+ AS    S +  +
Sbjct: 62  TGQVLYENKSNEKLPIASVTKVMSMLLAMEAIDSGKISLKDMVTASEYASGMGGSQAYIE 121

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
            G   ++ +ALK + + S+ND+ V++AE +  +E+ FV  MN  +  LG+  T F +  G
Sbjct: 122 PGEQYSVHDALKAIALHSSNDVTVSVAELVAGSEEAFVVQMNEKAGELGMKNTLFKDCTG 181

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKKYPNTNWAVGTFLGADG 215
           +   GH+++A D+A++S  + T  P+ + Y  +             NTN  V  + G DG
Sbjct: 182 LTDEGHFSSANDIALMSRELVTKHPKILEYSSVYTDTFRNGEFDLTNTNRLVKFYSGCDG 241

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTGFT A+GF + A+  + +  LI+V+LG  D NTR   +  LL  GF N         
Sbjct: 242 LKTGFTRAAGFCLSATVSRNNMRLISVVLGEPDSNTRFAETRKLLDYGFANYETADVNKK 301

Query: 276 IIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                            +       ++   + +      Q+       +     +K+  +
Sbjct: 302 GELVSEISVKKGLTSKAAGVIGNDVKILLPRGQKTKIIRQVALENSITAPLKAGQKVGEI 361

Query: 330 KNKITKK 336
              I +K
Sbjct: 362 IYMIEEK 368


>gi|82777459|ref|YP_403808.1| D-alanyl-D-alanine carboxypeptidase [Shigella dysenteriae Sd197]
 gi|81241607|gb|ABB62317.1| penicillin binding protein 6b [Shigella dysenteriae Sd197]
          Length = 378

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 148/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 2   FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTSGNEHQQRNPASLTKLMTGY 61

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 62  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN  + L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 122 DACVALADYIAGGQRQFVEMMNNYVEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 181

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 182 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNIDGLKTGHTSGAGFNLMASAVDGQ 241

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 242 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 301

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 302 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 341


>gi|254181990|ref|ZP_04888587.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           1655]
 gi|184212528|gb|EDU09571.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           1655]
          Length = 437

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 67  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 126

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 127 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 187 QFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 246

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 247 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 307 ETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIDTPRVYKGKSNNVQVGVKKDQFITVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 367 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 397


>gi|330006051|ref|ZP_08305469.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella sp. MS 92-3]
 gi|328535989|gb|EGF62402.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella sp. MS 92-3]
          Length = 423

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 19/350 (5%)

Query: 2   RQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           R  +  +++A LS+            +  A       + L+D N+G V+AEN  D   +P
Sbjct: 32  RLLITALSVAALSSAARADDLNIKTMIPGAPQIDAESWILIDYNSGKVLAENNADSRRDP 91

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTK+MT+YV+   +K  K   +  +T+  +A                K G  + +   
Sbjct: 92  ASLTKMMTSYVIGQAMKAGKFKESDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQL 151

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           ++ + ++S ND  VA+A+ +  ++  FV  MNN    LGL  THF   HG+   G Y++A
Sbjct: 152 IRGINLQSGNDACVAMADYVAGSQDAFVSLMNNYVNALGLKNTHFQTVHGLDADGQYSSA 211

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGF 226
           RDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+
Sbjct: 212 RDMALIGQALIRDVPNEYSIYREKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGY 271

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQ 282
           N+VASA +G   LI+ ++G      R   S  LL+ GF        I        +  + 
Sbjct: 272 NLVASATEGQMRLISAVMGGRTFKGRESESKKLLTWGFRFFETVNPIKAGKEFASEPAWF 331

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +       + ++V  T       + +     +        +K  ++   
Sbjct: 332 GDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNNTELHAPLQKNQVVGTI 381


>gi|312171708|emb|CBX79966.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Erwinia amylovora
           ATCC BAA-2158]
          Length = 411

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 149/353 (42%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    + +A+  N+  +         +          Y L+D N+G V+AE   D   
Sbjct: 17  LKRLTAGMLIALSLNVVAYADDVNIKTMIPGVPEIDAEAYILIDYNSGKVLAEKNADARR 76

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 77  DPASLTKMMTSYVIGQAIKAGKIHQDDMVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 136

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 137 QLTRGIVLQSGNDACVAMADYVAGSQDTFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 196

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T ++
Sbjct: 197 SARDMALIGRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTNLNVDGIKTGHTESA 256

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           G+N+VASA +G    LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 257 GYNLVASATEGQQMRLISTVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEP 316

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  N       + ++V  T       + +              +K  ++   
Sbjct: 317 VWFGNSDRVQLGVEKDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVIGTI 369


>gi|90406825|ref|ZP_01215017.1| putative D-alanyl-D-alanine carboxypeptidase [Psychromonas sp.
           CNPT3]
 gi|90312062|gb|EAS40155.1| putative D-alanyl-D-alanine carboxypeptidase [Psychromonas sp.
           CNPT3]
          Length = 385

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 159/342 (46%), Gaps = 13/342 (3%)

Query: 1   MRQF-LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++  L+ + +A   N       +  A       Y L+D ++G V+AEN       PASL
Sbjct: 1   MKRLGLLFVGLAFSVNALATPRVIPNAPVIAAKAYLLVDFDSGKVLAENNSQKILAPASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TK+MT+Y++ + LK         + IS+ A        S    + G  +++D+    +I+
Sbjct: 61  TKMMTSYIIGNELKVGNIHRDDKVLISEKAWSKNFPESSKMFIEVGKEVSVDDLNHGIII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+AE +  +E  FV  MN+ +  LG++ THFMN+HG+    HYTTA+DMA L
Sbjct: 121 QSGNDACVAMAEYIAGSEGAFVDLMNSWAIQLGMNNTHFMNSHGLNAKDHYTTAQDMATL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  +  D P+    +  K  +  G +  N N       L  DG+KTG T A+G+++V+SA
Sbjct: 181 AKALIRDLPEEYKLYSKKSFKYNGIEQYNRNGLLWDKSLNVDGLKTGHTDAAGYSLVSSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNE 288
           ++GD  LI+V++G      RN  S  +L+ GF         +   K      +       
Sbjct: 241 VKGDMRLISVVMGTRSSTARNVESKKILNWGFRFFETLTPYHAGDKLANERIWMGTQETI 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              ++ +         + N       DKE       K  ++ 
Sbjct: 301 NLGVNVDTTLVLPRGQSKNLNADFVIDKE-LRAPITKGQVVG 341


>gi|313901874|ref|ZP_07835294.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467867|gb|EFR63361.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 437

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 14/324 (4%)

Query: 18  PFLSIAETNKLPYY--TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
              +             ++D  +G ++ E   D P +PAS++KLMT  +    +   +  
Sbjct: 72  AGEAGGPGFPARSAALLVMDPASGQILWEKNGDEPRHPASISKLMTLLLTLEAIDAGQIR 131

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   +T+S  A   P S +  + G  +T+++ +K + V SAND  VA+AE +     +FV
Sbjct: 132 LQDQVTVSPRAQGTPGSTAFLEAGERITVEDLIKAVAVASANDACVALAEYISGDVDRFV 191

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYMHYFQI---- 190
           Q MN  +  LGL+ T F++ HG+    G+  +ARD+A+LS  +    P+ +HY  I    
Sbjct: 192 QRMNQRAAELGLTRTRFVDPHGLTDQPGNRMSARDVALLSRYLINHHPEILHYTSIWEDW 251

Query: 191 -KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +    +     NTN  V  + G DG+KTG T  SG ++V +A +GD   I V+LGA D 
Sbjct: 252 LRKGTDREFWLTNTNKLVAWYEGVDGLKTGLTDESGPSVVVTARKGDDRFIVVVLGAPDS 311

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEE---VCTTQKEI 303
           NTR + ++ LL   F +                   +    +VP   EE   V   + E 
Sbjct: 312 NTRWREASRLLDWAFASFDSVPVARPGQPLRAVRVAEGRRLQVPVTVEEVFGVTVPRGEG 371

Query: 304 INYNTQMKEAKDKESHFIDFEKIT 327
                 ++  +   +     +++ 
Sbjct: 372 GRVRWDLEVTEPVPAPVAPGQRVG 395


>gi|225174857|ref|ZP_03728854.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225169497|gb|EEG78294.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 389

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 11/335 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M+       +           L+D  +G V+ EN       PAS+TK+MT  +    L+E
Sbjct: 16  MVGAGTAAAAPEFEFSSKAQLLMDVGSGEVLYENNIHEQLYPASVTKIMTMLLAMEALEE 75

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K      + +S+ A+ +  S      G  +T ++ +  + V SAND + A+AE L  + 
Sbjct: 76  GKVKPDDLVPVSEAAAAHGGSQIFLSPGDRITFEDLMIGIGVGSANDGSWAMAEFLAGSA 135

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--------RIKTDFPQ 183
             FV  MN  ++ LG++ T+FMN HG+    HYTTA D+A++S                 
Sbjct: 136 DAFVTQMNEKARELGMNNTNFMNPHGLHDENHYTTAYDIALMSRELLRYPKIHEWITIWM 195

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              + + K  + +G    N N  V  + G DG+KTGFT  +G  + A+A +GD   +AVI
Sbjct: 196 DEEFLKGKIQKEEGVYLSNANRIVRYYDGGDGLKTGFTSEAGNCVSATAKRGDTRFMAVI 255

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN---ISEEVCTTQ 300
           LGA  R      + +LL  GF N                      +P    ++ +  +  
Sbjct: 256 LGAPGRPALFDEAKTLLDYGFANYKSVPIAQKGEVFGTVMVDKGVIPEVDIVAGDDLSLL 315

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            E    +    E            +   + + I K
Sbjct: 316 LEKAQQDEVDLEVSLPTRLPAPVPEGKAVGSLIVK 350


>gi|200388770|ref|ZP_03215382.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199605868|gb|EDZ04413.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 390

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEI 353


>gi|164688533|ref|ZP_02212561.1| hypothetical protein CLOBAR_02178 [Clostridium bartlettii DSM
           16795]
 gi|164602946|gb|EDQ96411.1| hypothetical protein CLOBAR_02178 [Clostridium bartlettii DSM
           16795]
          Length = 383

 Score =  202 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 95/345 (27%), Positives = 162/345 (46%), Gaps = 14/345 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKL------PYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++F+ +    +L      L  A+ N            L+D  +G V+ E        PA
Sbjct: 1   MKKFIGVFLAIILIISQSTLVFADKNGANLNLKCKSAVLMDVTSGKVLYEKNCHEKLPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT  ++   ++  K  LT  +T+S+ AS    S    +   T T+D  LK + V 
Sbjct: 61  SVTKVMTMLLICEAVESNKIKLTDEVTVSETASSMGGSQIFLEPNETQTVDTLLKGIAVA 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND  VA+AE +  + + FV  MNN +K LG+  T+F+N +G+    HYT+A D+A++S
Sbjct: 121 SANDACVAMAEYIGGSIEGFVDMMNNKAKELGMKDTNFVNTNGLPVDNHYTSAYDIALMS 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKY-----PNTNWAVGTFLGADGMKTGFTCASGFNIV 229
             +        +        + GKK       NTN  +  + GA G+KTGFT  + + + 
Sbjct: 181 RELLKHEMIEKYLTTWMDKVVVGKKQATIGLANTNKMIKYYNGATGVKTGFTGEAKYCVS 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY---QQNLS 286
           ASA +G   L++V+L       R K +++LL  GF N    K  +   K +    ++  S
Sbjct: 241 ASAKRGKTHLVSVVLRGETSQERFKDASTLLDYGFANYESVKICSKDQKLYTLKMRKADS 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
            ++  ++++      +        K+ K  E   +  +K ++L  
Sbjct: 301 EQIDLVAKDDLGILIKKGESKNFTKKIKVNEDIKLPVKKGSVLGK 345


>gi|109897877|ref|YP_661132.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudoalteromonas
           atlantica T6c]
 gi|109700158|gb|ABG40078.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Pseudoalteromonas atlantica T6c]
          Length = 390

 Score =  202 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 97/327 (29%), Positives = 151/327 (46%), Gaps = 10/327 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            ++    +  A +     + L+D  TG VIAE   D    PASLTK+MT+YV+   +   
Sbjct: 23  AASAAVIIPDAPSVSAKGFILVDFQTGKVIAEQNSDIQIPPASLTKMMTSYVIGKEIANG 82

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
               T  +TIS+NA        S    + G+ +++ +  + +IV+S ND  VA+AE +  
Sbjct: 83  NIKDTDMVTISENAWAKNFPDSSKMFIEVGTQISVGDLNRGIIVQSGNDACVAMAEHIAG 142

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E  F   MN  ++ LG+++THF+N+HG+    HYTT RDMA L+  + TD P     + 
Sbjct: 143 SEDAFASMMNLHAEKLGMTSTHFVNSHGLQDADHYTTPRDMATLARALITDVPNEYKVYS 202

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            K       K  N N       L  DG+KTG T  +G+++V+SA QGD  LIAV++GA  
Sbjct: 203 EKEFTYNNIKQYNRNGLLWDKSLNVDGIKTGHTSDAGYSLVSSATQGDMRLIAVVMGADS 262

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE--VCTTQKE 302
              R   +  LL  GF                    +  +       IS++  +   + +
Sbjct: 263 ERARKVENKKLLKYGFRFYETITPYQAGESFVSHRIFMGDKETVDLGISQDTPITIPRGQ 322

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLL 329
             N     +  K  E+     E +  L
Sbjct: 323 SKNLEANFELDKKLEAPLAKGEVVGKL 349


>gi|170704053|ref|ZP_02894691.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           IOP40-10]
 gi|170131039|gb|EDS99728.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia ambifaria
           IOP40-10]
          Length = 368

 Score =  202 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 14/328 (4%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK  +
Sbjct: 1   MPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKKISM 60

Query: 77  TTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
              IT S+         S    +    +++ + +  +I++S ND A+A+AE +  +E +F
Sbjct: 61  EQIITPSEAVRRVGLDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEGQF 120

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  DFPQY   F  K  +
Sbjct: 121 VTLMNAEAQRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEKEFK 180

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLIAVILGALD 248
               +  N N  +      DG+KTG T A+G+ ++ASA +      G + L++V++G   
Sbjct: 181 YNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLVSVMMGEPK 240

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKE 302
              R + S  +L+ G+      +             Y+   +     +  +  V   +  
Sbjct: 241 EGERTQDSMKMLNYGYSAFDAVRLFKGGQAMSTPRVYKGKENTVQVGVKSDQWVTVPRGL 300

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
                 ++       +   + +++  +K
Sbjct: 301 GDKVKPEVDVNAPLIAPLAEGQQVGTVK 328


>gi|331673546|ref|ZP_08374309.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA280]
 gi|331068819|gb|EGI40211.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA280]
          Length = 390

 Score =  202 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN +  L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAGKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LLS G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLSWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISVHQRVGEI 353


>gi|167040213|ref|YP_001663198.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X514]
 gi|300914297|ref|ZP_07131613.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X561]
 gi|307724467|ref|YP_003904218.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X513]
 gi|166854453|gb|ABY92862.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X514]
 gi|300889232|gb|EFK84378.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X561]
 gi|307581528|gb|ADN54927.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X513]
          Length = 382

 Score =  202 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 25/352 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F++   I +  +S++  +     +       ++D  TG V+ E  P      AS TK
Sbjct: 4   MKKFVLYLFILLYFMSSVKVYAESYPSISAKAAIVMDQETGRVLYEKNPHEKLPMASTTK 63

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S ND
Sbjct: 64  IMTLLVALEK-----GNLNDIVTVSKRAASVGGSSIWLSPGEKIDMESLLYGLMLNSGND 118

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  + + F++ MN  ++ +G   THF+   G+      HYTTA D+A+++  
Sbjct: 119 AATAIAEHIGGSVENFIEIMNQKAREIGAYNTHFVTPSGLDIGIDDHYTTAYDLALITRY 178

Query: 177 IKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 179 -AFRYPKFAEIVSTKEKTIPWEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 237

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFYQQN 284
           SA +  +  IAV+L +       + S  +L   F      K       I  I  +  ++N
Sbjct: 238 SATRDGRRFIAVVLNSP---PMWEDSMKILDYAFSKYKPYKVLEKGELIKKIKVEGGKEN 294

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + V      +   + E  + N +    K  ++     EKI  +  KI ++
Sbjct: 295 SVSVVSERECIIPALEDEKQDVNLEFHFPKSVKAPVEKGEKIGYVTVKIGEE 346


>gi|299133891|ref|ZP_07027085.1| Serine-type D-Ala-D-Ala carboxypeptidase [Afipia sp. 1NLS2]
 gi|298591727|gb|EFI51928.1| Serine-type D-Ala-D-Ala carboxypeptidase [Afipia sp. 1NLS2]
          Length = 408

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 134/314 (42%), Gaps = 8/314 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L+D  TG V+ E   D    P+S+ KLMTA V+F  L + +  LT    IS+
Sbjct: 45  DTDAPTAILIDAKTGSVLFEKNADELRAPSSMMKLMTAEVIFHALAKGEIKLTDEYRISE 104

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           NA          S       S +++D+ L  L+++S ND  +A+AE    +E  FV  M 
Sbjct: 105 NAWRKGGAPSGSSTMFAAIHSQVSIDDLLHGLVIQSGNDSCIALAEGYAGSEDAFVNRMQ 164

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K LGL+ + F N +G+    +  + R++A L+  I   +P +   F  +       +
Sbjct: 165 ARAKELGLTRSTFGNTNGLPNPDNKMSVRELAHLTRHIILTYPDFYKLFGEREFTWNKIR 224

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +G+  GADG+KTG+T   G+ +V SA+Q    LI V+ G  D   R   +  L
Sbjct: 225 QMNRNPLLGSLDGADGLKTGYTKEGGYGMVGSAVQNGTRLIVVVNGLEDSGDRAAAAKKL 284

Query: 260 LSMGFYNKTDRKKINYIIKDFY---QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           L  GF N   R   +      Y       S  V   ++E  +   +    +  +      
Sbjct: 285 LEWGFKNFESRTLFDAGQTIAYGKVFGGDSGSVELHADEPVSVMVQKNGNDKLLARIVYT 344

Query: 317 ESHFIDFEKITLLK 330
                  +    + 
Sbjct: 345 GPIHAPVQSGQQVG 358


>gi|167844088|ref|ZP_02469596.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei B7210]
          Length = 376

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 5   ATYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 64

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 65  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 124

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 125 AQFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVK 184

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 185 EFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMM 244

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 245 GETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIGTPRVYKGKSNNVQVGVKKDQFITV 304

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 305 PRGLADKVKPEVALNAPLIAPLADGQVVGSVK 336


>gi|293397311|ref|ZP_06641583.1| D-alanyl-D-alanine carboxypeptidase DacA [Serratia odorifera DSM
           4582]
 gi|291420229|gb|EFE93486.1| D-alanyl-D-alanine carboxypeptidase DacA [Serratia odorifera DSM
           4582]
          Length = 431

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 142/330 (43%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE+  D   +PASLTK+MT+YV+   LK  K
Sbjct: 60  VNIKTMIPGVPQIDAESYILIDYNSGKVLAESNADARRDPASLTKMMTSYVIGQALKSGK 119

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ ++A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 120 IGQEDLVTVGQDAWATGNPVFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 179

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN   K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 180 AGSQDAFVNLMNTYVKQLGLQNTHFQTVHGLDAQGQFSSARDMALIGQALIRDVPDEYAI 239

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA +G   LI+ +LG 
Sbjct: 240 YKEKEFTFNNIRQVNRNGLLWDTSLNVDGIKTGHTSAAGYNLVASATEGQMRLISAVLGG 299

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 300 RTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPVWFGDADRVELGVDKDVYLTIPR 359

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++ + 
Sbjct: 360 GRMKDLKASYVLNTPEIHAPLAKNQVVGSI 389


>gi|115524870|ref|YP_781781.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisA53]
 gi|115518817|gb|ABJ06801.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisA53]
          Length = 418

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/353 (22%), Positives = 139/353 (39%), Gaps = 23/353 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------------TNKLPYYTLLDTNTGHVIAEN 45
           +R+  + + ++           A                    P   L++ ++G V+ E 
Sbjct: 16  LRRIAMAVLLSFAVGSAGVALAANKSVQGATAAKDDGGYDADAPTAILIEASSGSVLFEK 75

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKGS 100
             D    P+S+ KLMT   VF  L++    LT    +S+N+          S    +  S
Sbjct: 76  NADELRAPSSMMKLMTVEYVFHALQQGDIKLTDEFKVSENSWRKGGAPAGGSTMFAEIHS 135

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++++N L+  I++S ND  + +AE L   E  F + +   ++ LGL  + F N++G+  
Sbjct: 136 RVSVENLLRGAIIQSGNDSCMVLAEGLAGGESAFAEKLTQRARELGLPRSTFANSNGLPD 195

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
            G+  + R++  L+  +   +P Y   F  +       +  N N  +    GADG+KTGF
Sbjct: 196 PGNKMSVRELGKLARHLILTYPDYYKIFGEREFTWNKIRQQNRNPLLTMLEGADGLKTGF 255

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T   G+ +V SA Q    LI V+ G  D + R + +  +L  GF N   R          
Sbjct: 256 TKDGGYGMVGSAEQNGMRLIVVVNGLEDADDRAQEAKKILEWGFRNFETRTLFKPQDTVG 315

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLK 330
           Y +    E  ++        K ++  N   K               E    + 
Sbjct: 316 YAKVFGGESRSVKLTSTEPVKVMVQKNGSDKLIARIVYSGPVPAPVEPGQPVG 368


>gi|78044481|ref|YP_360920.1| D-alanyl-D-alanine carboxypeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996596|gb|ABB15495.1| D-alanyl-D-alanine carboxypeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 391

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/344 (23%), Positives = 141/344 (40%), Gaps = 16/344 (4%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M+  +F  +  + +       L+           +++ N+G  +     D    PAS TK
Sbjct: 1   MKPVRFFALFILILCLKTIA-LAEEPQIIGRAAAVINVNSGKFVYLKNADQKMYPASTTK 59

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +           L+  + I K A     S      G  ++L++ L  +++ SAND
Sbjct: 60  IMTTLIALEK-----GNLSDRVYIDKEACYVEGSAIWLNPGEQLSLEDLLYSIMLNSAND 114

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+A+A+ +      FVQ MN+ ++ LG   THF+N +G+    HYTTARD+A+++    
Sbjct: 115 SAIAVAKYIGGDVATFVQEMNDKARELGAKNTHFVNPNGLPNDDHYTTARDLALIARAAM 174

Query: 179 TDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +            +  +  KY     N N  +  + GA+G+KTG+T  +   +VASA +
Sbjct: 175 QNPKFREIAATKTKVINRDPKYLRFLQNHNKLLWRYEGANGIKTGYTVKARQCLVASAAR 234

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK--DFYQQNLSNEVPNI 292
             +  IAV+LG+  RN     +  LL   F N    K ++   +            V  I
Sbjct: 235 DGEEFIAVVLGSEGRNV-YDDATKLLDYAFNNFKTVKLVSKGQEFGKVEVAGGKEPVKLI 293

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           + E             Q    K  E      +    +   + K+
Sbjct: 294 AAEDLYDTVNR-RQEPQFDYQKKIEKLQAPVKAGQRVGKIVVKE 336


>gi|167037551|ref|YP_001665129.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115966|ref|YP_004186125.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166856385|gb|ABY94793.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929057|gb|ADV79742.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 382

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 154/352 (43%), Gaps = 25/352 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F++   I +  +S++  +     +       ++D  TG V+ E  P      AS TK
Sbjct: 4   MKKFVLYLFILLYFMSSVKVYAESYPSISAKAAIVMDQETGRVLYEKNPHEKLPMASTTK 63

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S ND
Sbjct: 64  IMTLLVALEK-----GNLNDIVTVSKRAASVGGSSIWLSPGEKIDMESLLYGLMLNSGND 118

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  + + F++ MN  ++ +G   THF+   G+      HYTTA D+A+++  
Sbjct: 119 AATAIAEHIGGSVENFIEIMNQKAREIGAYNTHFVTPSGLDIGIDDHYTTAYDLALITRY 178

Query: 177 IKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 179 -AFRYPKFAEIVSTKEKTIPWEGREWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 237

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFYQQN 284
           SA +  +  IAV+L +       + S  +L   F      K       I  I  +  ++N
Sbjct: 238 SASREGRRFIAVVLNSP---PMWEDSMKILDYAFSKYKPYKVLEKGELIKKIKVEGGKEN 294

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + V      +   + E  + N +    K  ++     EKI  +  KI ++
Sbjct: 295 SVSVVSERECIIPALEDEKQDVNLEFHFPKSVKAPVEKGEKIGYVTVKIGEE 346


>gi|319761132|ref|YP_004125069.1| beta-lactamase [Alicycliphilus denitrificans BC]
 gi|330822990|ref|YP_004386293.1| beta-lactamase [Alicycliphilus denitrificans K601]
 gi|317115693|gb|ADU98181.1| Beta-lactamase [Alicycliphilus denitrificans BC]
 gi|329308362|gb|AEB82777.1| Beta-lactamase [Alicycliphilus denitrificans K601]
          Length = 387

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 14/342 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+   + ++             Y L+D   G V+A    D P   ASLTKLMT Y+VF  
Sbjct: 15  ALMAPAILWAQAPQPPEIAARNYLLVDVTAGQVLAAKDIDAPVEQASLTKLMTGYLVFDA 74

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           L+ KK  L   + +S+ A + P S         + +D+ LK +IV+S ND  +A+AE + 
Sbjct: 75  LRAKKITLEQRLPVSERAWKMPGSRMFIDPKMQVPVDDLLKGMIVQSGNDATMALAEGVG 134

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            T + FV+ MN  +K LG+  T + N  G+ + GH TTARD+A L+ R+  DFP+YMHY+
Sbjct: 135 GTAENFVRLMNEQAKALGMKNTAYKNPEGLTEPGHTTTARDLATLATRLIQDFPEYMHYY 194

Query: 189 QIKGLEIKGKKYPNTNWAVG---TFLGADGMKTGFTCASGFNIVASAIQG-----DQSLI 240
             K    +G    N+N            DG+KTG T A+G+ +VA++ +       + L+
Sbjct: 195 STKQYRYEGTPASNSNNRNTLLFRDPTVDGLKTGHTAAAGYCLVATSKRDFPNVGQRRLL 254

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEE-- 295
           +++LGA   N+R   S  LL+ G+      K  +           +   + +     +  
Sbjct: 255 SIVLGAASENSRANESQKLLNWGYTAFDAVKLFDAGQAADTPAVWKGTQSTLKIGRPDAI 314

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            V          +T++       + F   + I  LK ++  +
Sbjct: 315 VVTVPSGSAGKLSTEIVRKDPLIAPFTKGQPIGALKVRLGGE 356


>gi|323177151|gb|EFZ62741.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 1180]
          Length = 390

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASAI G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAIDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + +        +  +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   + +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLNGKELTAPISAHQRVGEI 353


>gi|296116334|ref|ZP_06834950.1| D-alanyl-D-alanine carboxypeptidase [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295977153|gb|EFG83915.1| D-alanyl-D-alanine carboxypeptidase [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 435

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/323 (26%), Positives = 139/323 (43%), Gaps = 4/323 (1%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           +    L         +  ++D  TG V+ E   D    P+SLTK+MTAYVVF  L+  + 
Sbjct: 76  SPANSLIGPVDTPARWACIIDYTTGAVLLEKAADERMPPSSLTKMMTAYVVFGMLRAGRL 135

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   +T+S+ A     S         + + + ++ ++++S ND  + +AE +  +E +F
Sbjct: 136 KLDQTLTVSEKAWRMQGSKMFVPLQGAVAVSDLIQGMVIQSGNDACIVLAEGVAGSEDQF 195

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  +  LG++ THFMNA G    GHY +ARD+  ++  +  DFP+Y H+F  KG  
Sbjct: 196 VSLMNAQAVQLGMTNTHFMNATGWPADGHYMSARDVTTIAMHLIHDFPEYYHFFAEKGFR 255

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
                  N N  V   + ADG+KTG T A GF + AS+ +    ++  I G    N R  
Sbjct: 256 YNRISQENRNALVVKGI-ADGLKTGHTDAGGFGLCASSERNGNRIVMAINGLPSSNARAF 314

Query: 255 VSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
               LL  GF N  +   ++              +  VP ++             N    
Sbjct: 315 EGERLLEWGFVNFENATLVHNGAVIDSAPVWLGKAATVPLVATRDVLLTLPHGWQNRARI 374

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
               K       +   +L   + 
Sbjct: 375 ALDYKSPVPAPIKAGQVLGQLVI 397


>gi|331661996|ref|ZP_08362919.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli TA143]
 gi|315616449|gb|EFU97066.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 3431]
 gi|331060418|gb|EGI32382.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli TA143]
          Length = 394

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 1   MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 61  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 121 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 181 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 241 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 301 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 352


>gi|15838821|ref|NP_299509.1| penicillin binding protein 6 precursor [Xylella fastidiosa 9a5c]
 gi|9107379|gb|AAF85029.1|AE004035_8 penicillin binding protein 6 precursor [Xylella fastidiosa 9a5c]
          Length = 396

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/363 (24%), Positives = 163/363 (44%), Gaps = 27/363 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----------------LPYYTLLDTNTGHVIAE 44
           M+     +A+ M +       + +                      + ++D  +G V+A 
Sbjct: 1   MKFLFATVAIFMCAVSSAVAQVPQPVPTKAPAIPIPKAPAPAVAKAWVVMDFASGQVLAG 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-----YPPSNSTFKKG 99
                   PASLTK+MT+YV+ + +K  K      + +++NA          S S F   
Sbjct: 61  ENIHTHLAPASLTKVMTSYVIAAEIKNGKVHRDDQVMMTENAWRKGGAGTDGSYSGFPVN 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T  L++  + +IV+S ND A+A+AE +  +E+ F   MN+ ++ +G+  +HF++A G+ 
Sbjct: 121 KTARLEDMEQGMIVQSGNDAAIALAEHVAGSEEAFASLMNSYAQRIGMKNSHFVDATGLS 180

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
             GHY++A DMA+L   +  D P+   Y ++K L + G K  N N  +      DG+KTG
Sbjct: 181 AEGHYSSAYDMALLGRALIRDSPETYAYNKVKELVVNGIKQSNRNLLLWRDPSVDGIKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
            T  +G+ I+ SA +GDQ ++ V++G +    R + S +LL+ GF               
Sbjct: 241 HTSEAGYCIINSAKRGDQRILTVVMGDVSEKKRAEDSLALLNWGFRFFETHTLYEPGKVV 300

Query: 280 FYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             Q+    +V  +   V         +    +    ++  ++ E+     + +  +K  +
Sbjct: 301 IKQKIWKGQVSEVQLGVARPLFVTVQRGRYNDLKPSIEVPRNLEAPIKPGQSVGKVKVTL 360

Query: 334 TKK 336
             K
Sbjct: 361 DGK 363


>gi|261253676|ref|ZP_05946249.1| D-alanyl-D-alanine carboxypeptidase [Vibrio orientalis CIP 102891]
 gi|260937067|gb|EEX93056.1| D-alanyl-D-alanine carboxypeptidase [Vibrio orientalis CIP 102891]
          Length = 392

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 151/341 (44%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + ++  + ++ F     +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15  IALSATIATSAFASPIVVPDAPQIAAKGYVLMDFHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L+     L   +TISKNA        S    + G+T+ +++  + +IV+S ND 
Sbjct: 75  YVIGQELERGNISLQDDVTISKNAWAKNFPDSSKMFIEVGTTVKVEDLNRGIIVQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  +G+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWADTIGMKDTHFANVHGLDNPNLYSTPYDMALLGSALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPDEYRIYSDKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  + N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKNANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKIWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N       +KE       K  ++     +
Sbjct: 315 DTYVTLPRGQAKNLTASFVLEKE-LEAPIMKGDVVGKLYYQ 354


>gi|271499698|ref|YP_003332723.1| beta-lactamase [Dickeya dadantii Ech586]
 gi|270343253|gb|ACZ76018.1| Beta-lactamase [Dickeya dadantii Ech586]
          Length = 403

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/351 (25%), Positives = 149/351 (42%), Gaps = 20/351 (5%)

Query: 2   RQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++  +   +A+ ++ F +         +          Y L+D N+G V+AE   D   N
Sbjct: 11  KRIALGTLLAISASTFAYADDINLKTMIPAVPDIDAEAYILIDYNSGKVLAEKNADARRN 70

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS------EYPPSNSTFKKGSTMTLDN 106
           PASLTK+MT+YV+   +K  K      +TI K+A           S    K G  + +  
Sbjct: 71  PASLTKMMTSYVIGQAIKAGKITPNDVVTIGKDAWATGNPDFQGSSLMFLKPGDRVPVYL 130

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             K +I++S ND  VA+A+ +  ++  FV  MN   K LGL  T+F   HG+   G Y++
Sbjct: 131 LNKGIILQSGNDACVAMADYVAGSQDAFVNLMNGYVKALGLQNTNFKTVHGLDAEGQYSS 190

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           ARDMA++   +  D P     ++ K       +  N N     + L  DG+KTG T ++G
Sbjct: 191 ARDMALIGQALIRDVPDEYATYKEKEFTFNNIRQLNRNGLLWDSSLAVDGIKTGHTASAG 250

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  +
Sbjct: 251 YNLVASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVAPLKTGKEFASEPVW 310

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             N       + ++V  T       + +               K  ++   
Sbjct: 311 FGNSDRVSLGVDKDVYITIPRGRMKDLKASYVLTNSELHAPLAKNQVVGTI 361


>gi|27379630|ref|NP_771159.1| penicillin binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27352782|dbj|BAC49784.1| penicillin binding protein [Bradyrhizobium japonicum USDA 110]
          Length = 451

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 12/316 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
             P   L++ ++G V+ E   D    P+S+ KLMTA VVF+ +++    LT    IS+NA
Sbjct: 89  DAPTAILIEASSGSVLFEKNADELRAPSSMMKLMTAEVVFNAIQKGDIKLTDEYRISENA 148

Query: 87  SEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV-QHMNN 140
                     S       S +++D+ L   I++S ND  +A+AE++   E+ F    M  
Sbjct: 149 WRKGGAPSGGSTMFAAINSKVSVDDLLHGAIIQSGNDACIALAEAMAGNERIFAADFMTK 208

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ LG++ + F N++G+   G+  T R++ IL+  I  DFP++   F  K       + 
Sbjct: 209 RARELGMTKSTFGNSNGLPDPGNKMTVRELGILARHIILDFPEFYKLFGEKEYTWNKIRQ 268

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           PN N  + +  GADG+KTG+T   G+ +V SA+Q    LI V+ G  D   R   +  +L
Sbjct: 269 PNRNPLLNSMEGADGLKTGYTKEGGYGMVGSAVQNGTRLIVVVNGLEDPEDRATEAKKML 328

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNISEEVCTTQKEIINYNTQMKEAK 314
             GF N   R  I       Y +    E      +     +V   +        ++  + 
Sbjct: 329 EWGFRNFETRTLIAADQPVGYAKVFGGESRSVKLIAKTPVKVMVHKNGSDKLIARVVYSG 388

Query: 315 DKESHFIDFEKITLLK 330
              +     +K+ ++K
Sbjct: 389 PVRAPVEAGQKVGVVK 404


>gi|291616674|ref|YP_003519416.1| DacA [Pantoea ananatis LMG 20103]
 gi|291151704|gb|ADD76288.1| DacA [Pantoea ananatis LMG 20103]
          Length = 418

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 150/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++  V  +IA ++              +          Y L+D N+G V+AE   D   
Sbjct: 25  LKRLTVGSLIAFSLSHAAIADDVNLKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 84

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ ++A                K G  + + 
Sbjct: 85  DPASLTKMMTSYVIGQAVKAGKIHQDDIVTVGQDAWATGNPVFKGSSLMFLKPGDRVPVS 144

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 145 QLTRGIVLQSGNDACVAMADYVAGSQDAFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 204

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P+    ++ K       +  N N     T L  DG+KTG T ++
Sbjct: 205 SARDMALIGQALIRDVPEEYAVYKEKEFTFNNIRQMNRNGLLWDTSLTVDGIKTGHTASA 264

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 265 GYNLVASATEGQMRLISAVMGGHTFKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPV 324

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  N       + ++   T       + +              +K  ++ + 
Sbjct: 325 WFGNSDRVQLGVEKDAYLTIPRGRMKDLKASYVLTNTELHAPLKKNQVVGSI 376


>gi|27363759|ref|NP_759287.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus CMCP6]
 gi|320157161|ref|YP_004189540.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus MO6-24/O]
 gi|27359875|gb|AAO08814.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus CMCP6]
 gi|319932473|gb|ADV87337.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus MO6-24/O]
          Length = 393

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 9/331 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S     +  A       + L+D ++G V+AE   +   +PASLTK+MT+YV+   L+  
Sbjct: 26  VSAAPVVVPDAPQIAAKGFVLMDYHSGKVLAEKEMNTKLSPASLTKMMTSYVIGQELERG 85

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              L   + +SKNA        S    + G+T+ + +  + +I++S ND  VA+AE +  
Sbjct: 86  NISLEDDVVVSKNAWAKNFPDSSKMFIEVGTTVKVKDLNRGIIIQSGNDACVAMAEHIAG 145

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E  FV  MN  + ++G++ THF N HG+     Y+T  DMA+L   +  D P     + 
Sbjct: 146 SEDAFVDLMNAWASSIGMTNTHFANVHGLDNANLYSTPYDMALLGQALIRDVPDEYRIYS 205

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            +     G    N N       +  DG+KTG T  +G+++V+SA +G   LIAV++G  D
Sbjct: 206 EQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGKMRLIAVVMGTKD 265

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEII 304
            N R   S  LLS GF                 +  +  N       ++E+   T     
Sbjct: 266 MNARKSESKKLLSYGFRFFETVAPHKAGETFVEEKIWMGNKDTLALGVNEDTYVTLPRGQ 325

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             N       +KE      +K  ++     +
Sbjct: 326 AKNLTASFVLEKE-LQAPIKKGDVVGKLYYQ 355


>gi|254464797|ref|ZP_05078208.1| D-alanyl-D-alanine carboxypeptidase protein [Rhodobacterales
           bacterium Y4I]
 gi|206685705|gb|EDZ46187.1| D-alanyl-D-alanine carboxypeptidase protein [Rhodobacterales
           bacterium Y4I]
          Length = 555

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 2/295 (0%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +FL   A  +L+ +  +L+       P    ++D  TG V+  +  D   +PASLTK+MT
Sbjct: 18  RFLWAAAGILLAVLGLWLAPQRAQAAPYAAMVIDARTGEVLHSSNADTRLHPASLTKMMT 77

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  ++  +  L T + IS+NA+  PPS    K G  +     ++   VKSAND A 
Sbjct: 78  LYIAFEAVRNGEITLDTKVKISRNAAAEPPSKLGLKPGQRIAFRYLIRAAAVKSANDAAT 137

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AI E+L  +E  F + MN T+K LG++ T F NAHG+   GH +TA DM  L   +  D+
Sbjct: 138 AIGETLSGSEAAFTRRMNRTAKALGMTRTTFKNAHGLTASGHLSTASDMTTLGRHLLYDY 197

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+Y + F  +  +   ++ PNTN   +  + GADG+KTG+T A+GFN+VASA +GD+ +I
Sbjct: 198 PEYYNLFSRRSTDAGIREVPNTNRRLLAAYRGADGIKTGYTRAAGFNLVASAKRGDERII 257

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           A + G     +RN   A LL +GF     R  +    +  YQ   +  V    +E
Sbjct: 258 ATVFGGKSSTSRNAKVAELLDLGFRRAPSRAALRKPQRPAYQGAGNIVVAEADDE 312


>gi|78067705|ref|YP_370474.1| penicillin-binding protein 6 [Burkholderia sp. 383]
 gi|77968450|gb|ABB09830.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Burkholderia sp. 383]
          Length = 437

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 14/342 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 62  FTGAPATYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 121

Query: 69  LKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   +T S+         S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 122 LDKKKISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 181

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN+ +  LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 182 VGGSEGQFVTLMNDEAARLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYS 241

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 242 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 301

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G      R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 302 SVMMGEQKEGERTQDSMKMLNYGYSAFDSVRLFKGGQAMSTPRIYKGKENTVQVGVKGDQ 361

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +       T++       +   + +++  +K     K
Sbjct: 362 WATVPRGLGDKIKTEVDVNAPLIAPLAEGQQVGTVKIVADGK 403


>gi|149914154|ref|ZP_01902685.1| Serine-type D-Ala-D-Ala carboxypeptidase [Roseobacter sp. AzwK-3b]
 gi|149811673|gb|EDM71506.1| Serine-type D-Ala-D-Ala carboxypeptidase [Roseobacter sp. AzwK-3b]
          Length = 388

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 8/328 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +    + A   +     + D  TG V+     D P  PAS++KLMT YV F  +++ +
Sbjct: 14  VIVLVSPAAAFDTRATSAFVFDMKTGTVLLSKNADAPLPPASMSKLMTLYVTFEAIRDGR 73

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--E 131
             L   + +S++A  +  S         + +++ L+ +IV S ND  V +AE+L     E
Sbjct: 74  LSLDDRLPVSQHAMSFGGSTMFLDTTDRVRVEDLLRGIIVLSGNDACVVLAEALSPDGTE 133

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + F ++M   ++ +G++ + FMN+ G    GH  + RD+A+LS  I  DFP++   F   
Sbjct: 134 QGFARYMTQRAQQMGMTNSTFMNSSGWPAAGHRMSMRDLALLSRHIIEDFPEFYPMFAET 193

Query: 192 GLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             E      +   N N  +G  +GADG+KTG T  +G+ +V SA QGD+ +I VI G   
Sbjct: 194 KFEFDGRAPQNTRNRNPILGLGIGADGLKTGHTQEAGYGLVGSAKQGDRRVIFVISGLET 253

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCTTQKEIIN 305
           R  R + S ++++  F    ++  +   ++          +  V   S    +T   ++ 
Sbjct: 254 RQARAEESEAIVNWSFRQFVEKSVVKAGVEVARADVWMGDATSVGLTSASDISTLMPVLA 313

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNKI 333
            +    E   +       +    L   +
Sbjct: 314 EDRVEGEVVYQGPVHAPIKAGDQLAELV 341


>gi|149201815|ref|ZP_01878789.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius sp. TM1035]
 gi|149144863|gb|EDM32892.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius sp. TM1035]
          Length = 387

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/340 (24%), Positives = 148/340 (43%), Gaps = 10/340 (2%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + +  IA A L       + A         ++D  TG V+ +   D P  PAS++KLMT 
Sbjct: 2   RLIRHIAAATLCLGVALPAQAFETSAKAAYVMDVTTGTVLLDKNADTPMPPASMSKLMTL 61

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YV F  ++  +  L   + +S++A  Y  S         + +++ L+ +IV S ND    
Sbjct: 62  YVAFEAVRSGRLTLDERLPVSQHAMSYGGSTMFLDTTDRVRVEDLLRGIIVLSGNDACAV 121

Query: 123 IAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           IAE+L     E  F + M   ++ +G++ + F NA G    GH  + RD+A+L+  I  D
Sbjct: 122 IAEALSPDGTEAGFARFMTQRAQQMGMTNSIFRNASGWPAEGHVMSMRDLALLARHIIED 181

Query: 181 FPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           FP++   F                N N  +G  +GADG+KTG T  +GF +  SA QG++
Sbjct: 182 FPEFYPMFAETEFRFDGRAPSNISNRNPLLGLGIGADGLKTGHTEQAGFGLTGSAKQGER 241

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNIS 293
            ++ VI G      R + S S+++  F    ++  +    +      +    ++    ++
Sbjct: 242 RVVFVISGLATAQDRARESESIVNWAFRQFAEKSVLTAGEEVARAAVWMGEATSVGLTVA 301

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           E+V T    +     + +             K  +L   +
Sbjct: 302 EDVSTLLPVLDGGELKGEVV-YTGPVRAPVAKGDVLAELV 340


>gi|163803893|ref|ZP_02197734.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. AND4]
 gi|159172307|gb|EDP57194.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. AND4]
          Length = 392

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 93/341 (27%), Positives = 148/341 (43%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  +  + F     +  A       Y L+D N+G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATIAQSAFASPVVVPDAPQIAAKGYVLMDYNSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +I++S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVHDLNRGIIIQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  +G+  THF N HG+     Y+T  DMA L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWADTIGMKNTHFANVHGLDNPNLYSTPYDMAQLGKALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPDEYRIYSDKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  D N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKVWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE      +K  ++     +
Sbjct: 315 DTYVTLARGEAKNLKASFVLEKE-LEAPIQKGDVVGKLYYQ 354


>gi|90412590|ref|ZP_01220592.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum 3TCK]
 gi|90326398|gb|EAS42810.1| putative D-alanyl-D-alanine carboxypeptidase [Photobacterium
           profundum 3TCK]
          Length = 399

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 150/343 (43%), Gaps = 14/343 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           ++   +   + M S  F   +             + L+   +G VIA    + P  PASL
Sbjct: 7   LKHLSLFTLVTMASLPFSASADVLPSPPVIDAKAWLLMSYESGQVIASFNENEPLAPASL 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TK+MT+YVV   +          + IS+NA        S      G  +T+D   K +I+
Sbjct: 67  TKIMTSYVVGKEINAGHINNDDLVIISENAWGKKFPGSSKMFLNIGDNVTVDQLNKGVII 126

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND  VA+AE +   +  F++ MN  ++ +G+  T+F N HG+     +TTA DMAIL
Sbjct: 127 SSGNDATVALAEHVAGHQAAFIEMMNRQAEVIGMQNTYFTNPHGLDADEQFTTAYDMAIL 186

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  +  + P+    F+ K    +  K  N N     T L  DG+KTG T  +G+++V+SA
Sbjct: 187 TRALIKELPEMYGLFKEKSFTFQDIKQGNRNGLLWDTTLNVDGVKTGHTSKAGYSLVSSA 246

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            Q  Q  IAV++G     TR   S  LL+ GF    D        +    +        +
Sbjct: 247 EQSGQRFIAVVMGTKSTGTRRSESKKLLTWGFRFYQDLTPTFDGKELEPIKVWYGSPSKV 306

Query: 293 SEE------VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           S E      +   +++  N   ++    + E+     E++  +
Sbjct: 307 SVELGDGGIITVPRRQRKNLEHKVFYNNNLEAPISKGEQVGKI 349


>gi|37679087|ref|NP_933696.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus YJ016]
 gi|37197829|dbj|BAC93667.1| D-alanyl-D-alanine carboxypeptidase [Vibrio vulnificus YJ016]
          Length = 393

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 9/331 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S     +  A       + L+D ++G V+AE   +   +PASLTK+MT+YV+   L+  
Sbjct: 26  VSAAPIVVPDAPQIAAKGFVLMDYHSGKVLAEKEMNTKLSPASLTKMMTSYVIGQELERG 85

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              L   + +SKNA        S    + G+T+ + +  + +I++S ND  VA+AE +  
Sbjct: 86  NISLEDDVVVSKNAWAKNFPDSSKMFIEVGTTVKVKDLNRGIIIQSGNDACVAMAEHIAG 145

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E  FV  MN  + ++G++ THF N HG+     Y+T  DMA+L   +  D P     + 
Sbjct: 146 SEDAFVDLMNAWASSIGMTNTHFANVHGLDNANLYSTPYDMALLGQALIRDVPDEYRIYS 205

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            +     G    N N       +  DG+KTG T  +G+++V+SA +G   LIAV++G  D
Sbjct: 206 EQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGKMRLIAVVMGTKD 265

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEII 304
            N R   S  LLS GF                 +  +  N       ++E+   T     
Sbjct: 266 MNARKSESKKLLSYGFRFFETVAPHKAGETFVEEKIWMGNKDTLALGVNEDTYVTLPRGQ 325

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             N       +KE      +K  ++     +
Sbjct: 326 AKNLTASFVLEKE-LQAPIKKGDVVGKLYYQ 355


>gi|332094304|gb|EGI99355.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella boydii 5216-82]
          Length = 403

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPDVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVY 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVTPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|126729339|ref|ZP_01745153.1| D-alanyl-D-alanine carboxypeptidase [Sagittula stellata E-37]
 gi|126710329|gb|EBA09381.1| D-alanyl-D-alanine carboxypeptidase [Sagittula stellata E-37]
          Length = 393

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/343 (23%), Positives = 143/343 (41%), Gaps = 8/343 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR+    +  A  + +    + A   K     ++D  TG V+     D    PAS++KLM
Sbjct: 1   MRKTTRRLLAAGTAILLATQAAAFDTKATAAHVIDVTTGTVLLAKNADEAVPPASMSKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  +++ +  L   + +S++A  Y  S         + +++ L+ +IV S ND  
Sbjct: 61  TLYITFEAIRDGRLSLDERLPVSEHAMSYTGSTMFLNTKDRIRVEDLLRGIIVLSGNDAC 120

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +AE+L     E  F + M   +  LG++ + F NA G    GH  + RD+ +L+  I 
Sbjct: 121 AVLAEALSPDGTEAGFARLMTQRAHQLGMTNSTFKNASGWPADGHVMSMRDLTLLALHII 180

Query: 179 TDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            DFP++   F  K  E          N N  +   +GADG+KTG T  +G+ +V SA   
Sbjct: 181 QDFPEFYPMFGEKKFEFDGRAPSNVNNRNPLLSLNIGADGLKTGHTQEAGYGLVGSAKND 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNI 292
            + +I  + G      R + S ++++  F    ++  +     I +        + V  +
Sbjct: 241 QRRIIFAMTGLATAGERAEQSEAIVNWAFRQFAEQTIVKKDQPITQAELWLGAQDHVDLV 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           SE+  T     +       E            K   L   I +
Sbjct: 301 SEKDITLLLPTMTAGGVTAEVVYTGPIQAPVNKGQRLAELIIQ 343


>gi|167568588|ref|ZP_02361462.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           oklahomensis C6786]
          Length = 378

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 7   ATYAPGAVPPPGVNARSWVLVDATSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 66

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 67  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 126

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG++ THF + +G+    HYTTA D+A LS  +  D+P Y   F +K
Sbjct: 127 AQFVNMMNAEAQRLGMTGTHFADVNGMPDPQHYTTAGDLAKLSTHLIRDYPDYYSIFSVK 186

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 187 DFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRSLPGATDATRRLVTVMM 246

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 247 GETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQAIDTPRVYKGKSNNVQVGVKKDQFITV 306

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 307 PRGMADKVKPEVALNAPLIAPLADGQAVGSVK 338


>gi|269960275|ref|ZP_06174649.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834886|gb|EEZ88971.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 388

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 9/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++       +          +   Y L+D  +G +IAE        PASLTKLMTAYVV
Sbjct: 13  LLLQTISAPALAVVTPNPPQLQAKGYVLMDFQSGAIIAEQNARAGLAPASLTKLMTAYVV 72

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              +K  +      +T+S+NA        S    +    +T+ N ++ +I++S ND  VA
Sbjct: 73  GQEIKSGRLQWDDKVTVSENAWSAKFPDSSKMFIQPKDEITVANLMRGVIIQSGNDACVA 132

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  FV  MN  +  L L+ T+F+N+HG+   G  T+  DMA L   I  D P
Sbjct: 133 LAEHVAGSEGAFVALMNGWADKLSLNDTYFVNSHGLDSEGIQTSPNDMATLMQSIINDVP 192

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +    +  K  +       N N       +  DG KTG+T  +G+++V+SA QG   LI+
Sbjct: 193 EVYALYSEKVFKWNKITQYNRNKLLWDKSMDVDGGKTGYTSNAGYSLVSSAKQGKMRLIS 252

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVC 297
           V++G   + +R   S +LLS GF     ++             ++ ++S      +++  
Sbjct: 253 VVMGTPSKQSRISQSKNLLSYGFRFYDTKQVAKQGEVQASAKVWKGDVSEIDLGFAQDAY 312

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            T    +          + E       K  ++   + K
Sbjct: 313 LTLPRSLTAGLDKSVVVN-EPLIAPIAKGDVVGKVVWK 349


>gi|116690911|ref|YP_836534.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia cenocepacia
           HI2424]
 gi|170734237|ref|YP_001766184.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia cenocepacia
           MC0-3]
 gi|116649000|gb|ABK09641.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Burkholderia cenocepacia HI2424]
 gi|169817479|gb|ACA92062.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia cenocepacia
           MC0-3]
          Length = 436

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 14/342 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 61  FTGAPATYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 120

Query: 69  LKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   +T S          S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 121 LDKKKISMEQIVTPSDAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 180

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN+ +  LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 181 VGGSEGQFVTMMNDEAGRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYS 240

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 241 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 300

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G    + R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 301 SVMMGEQKESERTQDSMKMLNYGYSAFDSVRLFKGGQAISTPRIYKGKDNTVQVGVKGDQ 360

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +       T++       +   + +++  +K     K
Sbjct: 361 WATVPRGLGDKVKTEVDVNAPLIAPLAEGQQVGTVKIVADGK 402


>gi|91224062|ref|ZP_01259325.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 12G01]
 gi|91190973|gb|EAS77239.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 12G01]
          Length = 390

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 97/333 (29%), Positives = 143/333 (42%), Gaps = 9/333 (2%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++       +  A       Y L+D +TG V+ E       NPASLTKLMTAYV    + 
Sbjct: 21  SLAYAAPSVVPNAPELSSRGYVLMDFHTGKVLVERDAHKRLNPASLTKLMTAYVAGQEIN 80

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                L   + IS+NA        S    +  ++++L +  + LIV+S ND +VAIAE +
Sbjct: 81  TGNITLNDEVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLYRGLIVQSGNDASVAIAEYV 140

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  FV  MN+ +  L LS T F N HG+   G Y+T  D+A L   I  D P     
Sbjct: 141 AGSESGFVSLMNSWAAKLELSNTAFTNPHGLDSDGLYSTPYDIAKLGQAIIRDLPDIYPL 200

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +        G    N N       +  DGMKTG+T  +G+++  SAIQGD  LIAV++GA
Sbjct: 201 YSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYSLATSAIQGDMRLIAVVMGA 260

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKE 302
              N R   S  LLS GF             +      +          ++ +V  T  +
Sbjct: 261 KSENVRESESKQLLSYGFRFYDTVMPTEAGAELAKARVWMGEKDELTVGVANDVYLTLPK 320

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               N Q +  +          +  ++   + K
Sbjct: 321 GDVKNLQAEV-EYNGDLVAPISEQQVVGKVLYK 352


>gi|262041277|ref|ZP_06014488.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259041393|gb|EEW42453.1| D-alanyl-D-alanine carboxypeptidase DacA [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 423

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 19/350 (5%)

Query: 2   RQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           R  +  +++A LS+            +  A       + L+D N+G V+AEN  D   +P
Sbjct: 32  RLLITALSVAALSSAARADDLNIKTMIPGAPQIDAESWILIDYNSGKVLAENNADSRRDP 91

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTK+MT+YV+   +K  K   +  +T+  +A                K G  + +   
Sbjct: 92  ASLTKMMTSYVIGQAMKAGKFKESDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQL 151

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           ++ + ++S ND  VA+A+ +  ++  FV  MNN    LGL  THF   HG+   G Y++A
Sbjct: 152 IRGINLQSGNDACVAMADYVAGSQDAFVSLMNNYVNALGLKNTHFQTVHGLDADGQYSSA 211

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGF 226
           RDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+
Sbjct: 212 RDMALIGQALIRDVPNEYSIYREKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGY 271

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQ 282
           N+VASA +G   LI+ ++G      R   S  LL+ GF        I        +  + 
Sbjct: 272 NLVASATEGQMRLISAVMGGRTFKGRESESKKLLTWGFRFFETVNPIKAGKEFASEPAWF 331

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +       + ++V  T       + +     +        +K  ++   
Sbjct: 332 GDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNNTELHAPLQKNQVVGTI 381


>gi|331653434|ref|ZP_08354435.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli M718]
 gi|331048283|gb|EGI20359.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli M718]
          Length = 390

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/340 (25%), Positives = 148/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNI 292
           + LI+V++GA     R + +  LL  G  N T  + +        +  +  +  N     
Sbjct: 254 RRLISVVMGADSAKGREEEAKKLLRWGQQNFTTVQILHRRKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 353


>gi|311280463|ref|YP_003942694.1| Beta-lactamase [Enterobacter cloacae SCF1]
 gi|308749658|gb|ADO49410.1| Beta-lactamase [Enterobacter cloacae SCF1]
          Length = 399

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/350 (24%), Positives = 148/350 (42%), Gaps = 19/350 (5%)

Query: 2   RQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           R  +  +++A LS+            +          Y L+D N+G V+AE   D   +P
Sbjct: 8   RLLITALSVAALSSAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDP 67

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTK+MT+YV+   +K  K   +  +T+  +A                K G  + +   
Sbjct: 68  ASLTKMMTSYVIGQAMKAGKFKDSDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQL 127

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           ++ + ++S ND  VA+A+ +  ++  FV  MNN    LGL  THF   HG+   G Y++A
Sbjct: 128 IRGINLQSGNDACVAMADYVAGSQDAFVGLMNNYVNALGLKNTHFQTVHGLDADGQYSSA 187

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGF 226
           RDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+
Sbjct: 188 RDMALIGQALIRDVPNEYSIYREKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGY 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQ 282
           N+VASA +G   L++ ++G      R   S  LL+ GF        +        +  + 
Sbjct: 248 NLVASATEGQMRLVSAVMGGRTYKGRETESKKLLTWGFRFFETVSPLKAGKEFASEPAWF 307

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            N       + ++V  T       + +     +        +K  ++   
Sbjct: 308 GNTDRASLGVDQDVYLTIPRGRMKDLKASYVLNSTELHAPLQKNQVVGTI 357


>gi|297616714|ref|YP_003701873.1| serine-type D-Ala-D-Ala carboxypeptidase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144551|gb|ADI01308.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 381

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/339 (25%), Positives = 148/339 (43%), Gaps = 10/339 (2%)

Query: 2   RQFLVIIA-MAMLSNIFPFLSIAE--TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++ L ++A +   S  FP  +       +   Y L+D ++G V+          PAS+TK
Sbjct: 5   KRLLWLMAWVLFFSLAFPTTAWGAVVDVEADSYVLMDADSGKVLLAKNEHKRLPPASMTK 64

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMT  +    L + K  L   +  S+NA +   S    + G  MT ++ +  + V SAND
Sbjct: 65  LMTLILAMEDLYKGKVDLKEKVVASENAWKLGGSQIYLEPGEEMTFEDMVIAIAVGSAND 124

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             VA+AE L  + ++FV+ MN  +K L L  THF+NA+G+    HY++A D+A+++    
Sbjct: 125 ACVAVAEHLDGSHEEFVKRMNAKAKELRLKDTHFVNAYGLPDPDHYSSAYDLALMARYAL 184

Query: 179 TDFP-QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                      +   L     K  NTN  +  + G DG KTG+T  + F +V++A +   
Sbjct: 185 CYPKLLEFTSIKEYNLRQGEFKLYNTNKLLWHYPGTDGFKTGWTNEAKFCLVSTAKRNGL 244

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            LI V++ +  +    + S  L + GF     R          +    +          +
Sbjct: 245 RLICVVMASPQKGGNFRDSMKLFNYGFAKYAYRSFFAPQSQCGLVSVGKGTNDRVEAICT 304

Query: 294 EEV--CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +EV     + E  N   +       ++     +K+  +K
Sbjct: 305 QEVGASCLKGEEKNITYKRSLVDYIDAPVKKGQKLGEIK 343


>gi|206577494|ref|YP_002239713.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           342]
 gi|288936555|ref|YP_003440614.1| beta-lactamase [Klebsiella variicola At-22]
 gi|290510389|ref|ZP_06549759.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella sp. 1_1_55]
 gi|206566552|gb|ACI08328.1| serine-type D-Ala-D-Ala carboxypeptidase [Klebsiella pneumoniae
           342]
 gi|288891264|gb|ADC59582.1| Beta-lactamase [Klebsiella variicola At-22]
 gi|289777105|gb|EFD85103.1| D-alanyl-D-alanine carboxypeptidase [Klebsiella sp. 1_1_55]
          Length = 399

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 19/350 (5%)

Query: 2   RQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           R  +  +++A LS+            +  A       + L+D N+G V+AEN  D   +P
Sbjct: 8   RLLITALSVAALSSAARADDLNIKTMIPGAPQIDAESWVLIDYNSGKVLAENNADSRRDP 67

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTK+MT+YV+   +K  K   +  +T+  +A                K G  + +   
Sbjct: 68  ASLTKMMTSYVIGQAMKAGKFKESDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQL 127

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           ++ + ++S ND  VA+A+ +  ++  FV  MNN    LGL  THF   HG+   G Y++A
Sbjct: 128 IRGINLQSGNDACVAMADYVAGSQDAFVSLMNNYVNALGLKNTHFQTVHGLDADGQYSSA 187

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGF 226
           RDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+
Sbjct: 188 RDMALIGQALIRDVPNEYSIYREKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGY 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQ 282
           N+VASA +G   LI+ ++G      R   S  LL+ GF        I        +  + 
Sbjct: 248 NLVASATEGQMRLISAVMGGRTFKGRESESKKLLTWGFRFFETVNPIKAGKEFASEPAWF 307

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +       + ++V  T       + +     +        +K  ++   
Sbjct: 308 GDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNNTELHAPLQKNQVVGTI 357


>gi|117619099|ref|YP_857750.1| penicillin-binding protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117560506|gb|ABK37454.1| penicillin-binding protein [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 396

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 96/359 (26%), Positives = 148/359 (41%), Gaps = 24/359 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENY 46
           M +F   + +A L +                     A       + L+D  +G V+AE  
Sbjct: 1   MSKFARSVILASLISATAQANTPVPTPNANPVVVPAAPEISAKAHILIDYYSGQVLAEQN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMT 103
            +    PASLTK+MT+Y++   L +     T  +TIS+NA        S    + G  ++
Sbjct: 61  AEERLPPASLTKMMTSYIIGQELLKGNIKRTDMVTISQNAWSKNYSDSSKMFIEVGKQVS 120

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +D+  K +I++S ND  VA+AE L  +   F   MN+ +  LG++ +HFMN HG+   GH
Sbjct: 121 VDDLNKGIIIQSGNDACVAMAEFLAGSTDSFASLMNSWAAKLGMNDSHFMNPHGLDAEGH 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTC 222
           Y+TA DMA L   +  D P     +  K     G    N N       L  DG+KTG   
Sbjct: 181 YSTAHDMARLGQALIRDLPDEYKIYAQKSFVFNGITQHNRNRLLWDQSLQVDGIKTGHVS 240

Query: 223 ASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK--- 278
             G+N+V+SA       LIAV+LGA    +R   S  LL+ GF             +   
Sbjct: 241 QVGYNLVSSATNNEGMRLIAVVLGASSEASRAAESKKLLTYGFRFFQSLTPYKAGTELVT 300

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              +  + S     + ++V          N +     + E       K   +     K+
Sbjct: 301 QKIWMGDKSEVKLGVDKDVSVLVTRGQGNNLKADFQLESE-LKAPLAKGQRVGTVFLKQ 358


>gi|205353205|ref|YP_002227006.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205272986|emb|CAR37933.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628291|gb|EGE34634.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 390

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQRVGEI 353


>gi|89099052|ref|ZP_01171931.1| DacF [Bacillus sp. NRRL B-14911]
 gi|89086182|gb|EAR65304.1| DacF [Bacillus sp. NRRL B-14911]
          Length = 371

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/318 (25%), Positives = 136/318 (42%), Gaps = 8/318 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
            +    L++ +TG V+ E   +    PAS+TK+MT  ++   + + K  +   I  S+ A
Sbjct: 18  NVKSAILIERDTGAVLYEQNSNEQLPPASMTKIMTMLLIMEAIDKGKLSMDEKIRASEYA 77

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    + G  MT +  LK + + S ND +VA+AE L  +E++FV+ MN  +K+LG
Sbjct: 78  ASMGGSQIFLEPGEEMTTEQMLKGIAIGSGNDASVAMAERLAGSEEEFVKLMNKKAKDLG 137

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPN 202
           L  T F NA G+    HY+TA DMA+++  +            +   ++    K     N
Sbjct: 138 LKDTIFKNATGLPVTEHYSTAHDMALMAKELLKYEGITKFTGTYEAYLREDTDKKFWLVN 197

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  V  + G DG+KTGFT  + + + A+A +    +IAV+ GA     RN     +L  
Sbjct: 198 TNRLVRFYPGVDGLKTGFTNEAKYCLTATAEKNGMRVIAVVFGAPTSKERNAQVTKMLDY 257

Query: 263 GFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
            F                     +  +       SE +    K+  +     K    K+ 
Sbjct: 258 AFSQYETHPMYKRNEALGSAKVSKGEIKQVEALTSEPISLLTKKGEDTKAVKKTVVLKKD 317

Query: 319 HFIDFEKITLLKNKITKK 336
                 K   +     +K
Sbjct: 318 LKAPIAKGDQIGTLKVEK 335


>gi|326391076|ref|ZP_08212623.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325992861|gb|EGD51306.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 379

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 25/352 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F++   I +  +S++  +     +       ++D  TG V+ E         AS TK
Sbjct: 1   MKKFILYLFILLYFMSSVKVYAESYPSISAKAAIVMDQETGRVLYEKNSHEKLPMASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S ND
Sbjct: 61  IMTLLVALEK-----GNLNDIVTVSKRAASVGGSSIWLSPGEKIDMESLLFGLMLNSGND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  + + FV+ MN  +K +G   THF+   G+      HYTTA D+A+++  
Sbjct: 116 AATAIAEHIGGSVESFVEIMNQKAKEIGAYNTHFVTPSGLDIGIDDHYTTAYDLALITRY 175

Query: 177 IKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 176 -AFRYPKFAEIVSTKEKTIPWEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 234

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFYQQN 284
           SA +  +  IAV+L +       + S  +L   F      K       I  +  +  ++N
Sbjct: 235 SATREGRRFIAVVLNSP---PMWEDSMKILDYAFSKYKPYKVLEKGELIKKVKVEGGKEN 291

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + V   +  +   ++E  N N +    K  ++     EKI  +  KI ++
Sbjct: 292 TVSVVSEKACVIPALEEEKQNVNLEFYLPKSVKAPVEKGEKIGYVTVKIGEE 343


>gi|320668144|gb|EFX35013.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 388

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 93/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG +          N
Sbjct: 1   MKRRLIIAASLFIFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQIFTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|20807777|ref|NP_622948.1| D-alanyl-D-alanine carboxypeptidase [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516333|gb|AAM24552.1| D-alanyl-D-alanine carboxypeptidase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 380

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 150/352 (42%), Gaps = 24/352 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M+++  ++ + M    F  +  S   +       ++D NTG V+ E         AS TK
Sbjct: 1   MKKYFSLLLILMFFVTFSKVYGSDIPSVSAKAAIVMDQNTGRVLYEKNAHLKLPMASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +        +  L   +T+S+ A+    S+     G  + +++ L  +++ S ND
Sbjct: 61  IMTLLIALE-----RGNLNDIVTVSQKAASVGGSSIWLSPGEKIDMESLLYGIMLNSGND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  T + FV+ MN  +K +G   THF+   G+      HYTTA D+A+++  
Sbjct: 116 AATAIAEHIGGTVENFVEMMNQKAKEIGAYNTHFVTPSGLDIGIDDHYTTAYDLALITRY 175

Query: 177 IKTDFPQYMHYFQIKGLEIK------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
              ++P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 176 AFLNYPKFAEIVSTKEKTIPCEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 235

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           SA +  +  IAV+L +       + S  +L   F      K           +    ++ 
Sbjct: 236 SATREGRRFIAVVLNSP---PMWEDSMKILDYAFSRFKPFKVFERNDVVKKVKVEKGKIE 292

Query: 291 NISEEVCTT------QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            I   V         ++EI   N +       E+     EKI  +  KI ++
Sbjct: 293 EIEVAVEKDCIIPVSEEEIGKVNLEFHIPDKLEAPIKKGEKIGHVVVKIGEE 344


>gi|300715824|ref|YP_003740627.1| penicillin-binding protein 5 [Erwinia billingiae Eb661]
 gi|299061660|emb|CAX58776.1| Penicillin-binding protein 5 [Erwinia billingiae Eb661]
          Length = 403

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLV--IIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++     +IA+++ S            +          Y L+D N+G V+AE   D   
Sbjct: 10  IKRLTAGSLIALSLTSFAHADDVNIKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAVKAGKIKQDDMVTVGKDAWATGNPVFKGSSLMFLKPGDRVAVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 130 ELTRGIVLQSGNDACVAMADYVAGSQDTFVGLMNNYVKALGLQNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K       +  N N     T L  DG+KTG T A+
Sbjct: 190 SARDMALIGRALIRDVPDEYAVYKEKEFTFNNIRQMNRNGLLWDTSLQVDGIKTGHTEAA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +          + ++V  T       + +               K  ++   
Sbjct: 310 WFGTSDRVQLGVEKDVFLTIPRGRMKDLKASYTLSNTELHAPLAKNQVVGTI 361


>gi|167551002|ref|ZP_02344757.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|168242129|ref|ZP_02667061.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168466288|ref|ZP_02700158.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168818250|ref|ZP_02830250.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194445713|ref|YP_002041329.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448664|ref|YP_002046110.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|207857497|ref|YP_002244148.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|194404376|gb|ACF64598.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194406968|gb|ACF67187.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|195631235|gb|EDX49795.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|205324074|gb|EDZ11913.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205338413|gb|EDZ25177.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205345154|gb|EDZ31918.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|206709300|emb|CAR33640.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 390

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQRVGEI 353


>gi|78043555|ref|YP_360781.1| D-alanyl-D-alanine carboxypeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995670|gb|ABB14569.1| D-alanyl-D-alanine carboxypeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 377

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 5/320 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            L+           L++  TG ++ E         AS+TKLMT  +    +++ K  L  
Sbjct: 21  ALAAPLEINARAAILMEPYTGKILYEKEIHKKLPIASVTKLMTLLLAIEAVEKGKVNLED 80

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A+    S      G   +  + L  + V SAND  VA+AE++   E+ FV+ M
Sbjct: 81  IVKVSEEAASMGGSQLYMYAGEEFSFKDLLMAVAVASANDACVAVAETVAGNEQAFVEEM 140

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGLEIKG 197
           N  ++ LG++ THF+N++G     HY+T  D+AIL            +   +   L    
Sbjct: 141 NKKAEELGMTNTHFVNSYGFDDPNHYSTCYDLAILLREAIKHPLFLELSQIKEFTLRGGE 200

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            +  NTN  +  + G D  KTG+T  +G+ + ++A + D  LIAV+LG   +      S 
Sbjct: 201 TRRFNTNKLLWYYRGVDAGKTGWTEEAGYCLASTASRDDLRLIAVVLGCPVKKGHFTESI 260

Query: 258 SLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            L + G+ N      +     +     +      +      V   +++    N + +  K
Sbjct: 261 KLYNYGYANFKAYPILAEKFSVKVKVVKGEKEQILVGPGAPVLLVEEKGKKINPRYEL-K 319

Query: 315 DKESHFIDFEKITLLKNKIT 334
             E      +   ++   + 
Sbjct: 320 LPEKITAPVKNGQVMGEVVI 339


>gi|283832568|ref|ZP_06352309.1| D-alanyl-D-alanine carboxypeptidase DacA [Citrobacter youngae ATCC
           29220]
 gi|291072237|gb|EFE10346.1| D-alanyl-D-alanine carboxypeptidase DacA [Citrobacter youngae ATCC
           29220]
          Length = 390

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 146/340 (42%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F +  + A  +N+  F           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FAMSFSPAWATNVASFAPQPPAINAGAWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +  K+   T  +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSKRISPTDIVTVGRDAWAKDNPVFVGSSLMFLKQGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   + +FV  MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQPQFVAMMNNYAQKLNLQDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P + H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPDFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R   +  LL  G  N    + +    +      +  +        
Sbjct: 254 RRLIAVVMGAESAKGREDQARKLLQWGQQNFDTVQVLRSGKQVGTERIWYGDKEKISLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            ++      +    N + K   DK+           +   
Sbjct: 314 EQDFWMALPKAEVANIKAKYVLDKKELVAPIAAHQRVGEI 353


>gi|259909131|ref|YP_002649487.1| D-alanyl-D-alanine carboxypeptidase fraction A [Erwinia pyrifoliae
           Ep1/96]
 gi|224964753|emb|CAX56270.1| penicillin-binding protein 5 [Erwinia pyrifoliae Ep1/96]
          Length = 404

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 150/353 (42%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    + +A+  N+  +         +          Y L+D N+G V+AE   D   
Sbjct: 10  LKRLTAGMLIALSLNVVAYADDVNIKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAIKAGKIHQDDMVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  +++ FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 130 QLTRGIVLQSGNDACVAMADYVAGSQETFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T ++
Sbjct: 190 SARDMALIGRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTESA 249

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           G+N+VASA +G    LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 250 GYNLVASATEGQQMRLISTVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEP 309

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  N       + ++V  T       + +              +K  ++   
Sbjct: 310 VWFGNSDRVQLGVEKDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVVGTI 362


>gi|73539986|ref|YP_294506.1| penicillin-binding protein 6 [Ralstonia eutropha JMP134]
 gi|72117399|gb|AAZ59662.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Ralstonia eutropha JMP134]
          Length = 399

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 146/322 (45%), Gaps = 15/322 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + L D  +G  +A    D    PASLTKLMTAY+ F  LKEK+  L   +  +
Sbjct: 39  PQVAAKSWMLFDVTSGQALASQNADQRIEPASLTKLMTAYLAFEALKEKRLTLDQAVVPT 98

Query: 84  --KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                 +   S    +    +++ + L  LIV+S ND A+A+AE++  +E+ FV  MN  
Sbjct: 99  TLVLKVKSDESRMFIEPNKPVSVQDLLMGLIVQSGNDAALALAEAVGGSEEGFVAMMNRE 158

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ +G+  THF N  G+    HYTTA D+A L+ R+  DFP+Y   +  K       K P
Sbjct: 159 AQRMGMKNTHFTNTDGIPDPNHYTTAVDLATLTTRLIQDFPEYYGMYSQKEFTYNKIKQP 218

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNK 254
           N N  +      DG+KTG T ++G+ +++SA +       G + LI+V++G      R +
Sbjct: 219 NRNRLLYIDPTVDGVKTGHTKSAGYCLISSAKRPLANVPNGSRRLISVVIGTTTEQVRTQ 278

Query: 255 VSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNT 308
            S  +L+ GF      +  +        D Y+         +  E  V   +        
Sbjct: 279 ESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKAGTVKIGVQNETFVTVPKGTGGRLKP 338

Query: 309 QMKEAKDKESHFIDFEKITLLK 330
            ++  +   +     +++  +K
Sbjct: 339 VLERQELLIAPIAAGQQVGSVK 360


>gi|317132116|ref|YP_004091430.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ethanoligenens harbinense
           YUAN-3]
 gi|315470095|gb|ADU26699.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ethanoligenens harbinense
           YUAN-3]
          Length = 419

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 3/317 (0%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A T       L + +TG ++ EN P     PAS++K+MT  +V   ++  K   T  
Sbjct: 66  TPPAVTTTAKSAVLAEQSTGRILYENNPHEKMYPASISKIMTELLVLEAIENGKLHFTDK 125

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +++S +AS    S+   + G  MT+ +  K ++V SAND AVA+AE +  +E  FV  MN
Sbjct: 126 VSVSAHASSMGGSDIWLEPGEVMTVLDLFKAMVVNSANDAAVALAEKVAGSEPAFVNLMN 185

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-TDFPQYMHYFQIKGLEIKGK 198
             +K LG++ T+F NA G+   G+ T+A D+ ++S  +             +  L     
Sbjct: 186 RKAKELGMNDTNFTNATGLDADGNLTSAYDVMLMSRELLRHKEIFNYTTIWMDSLRGGKT 245

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              NTN  +  + GA+G+KTG T  +G+ +  +A++    LIAV++       R   + +
Sbjct: 246 ALFNTNRLIRFYQGANGLKTGSTGKAGYCLSGTALRDGMQLIAVVMNCPTLQERFTAAGT 305

Query: 259 LLSMGFYNKT--DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           LL  GF N +    KK++  +         ++V  +++   +   E    +   ++    
Sbjct: 306 LLDYGFANWSCVTPKKLSKPLYVDVLHGAQDKVEAVADGNPSVVIEKGKEDGIQQKVSLA 365

Query: 317 ESHFIDFEKITLLKNKI 333
           ++     EK  +L    
Sbjct: 366 QNVMAPVEKGQVLGQIT 382


>gi|84394380|ref|ZP_00993099.1| D-alanyl-D-alanine carboxypeptidase [Vibrio splendidus 12B01]
 gi|84374982|gb|EAP91910.1| D-alanyl-D-alanine carboxypeptidase [Vibrio splendidus 12B01]
          Length = 393

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 151/341 (44%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  + ++ F     +  A       + L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 16  VALSATIATSSFAAPIVVPDAPKIAAKGFVLMDYHSGKVLAEKEMNTQLSPASLTKMMTS 75

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L+     L   + IS+NA        S    + G+T+ ++   + +I++S ND 
Sbjct: 76  YVIGQELERGNINLNDDVVISENAWAKNFPDSSKMFIEVGTTVKVEELNRGIIIQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  + ++G+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 136 TVAMAEHIAGSEDAFVDLMNAWASSIGMKDTHFANVHGLDNPNLYSTPYDMALLGQALIR 195

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 196 DVPDEYRIYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSKAGYSLVSSATEGKMR 255

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  + N R   S  LLS GF                 +  +  +       + E
Sbjct: 256 LVAVVMGTKNANARKTESKKLLSYGFRFFETVAPHTAGETFVEEKIWMGSKDTVALGVDE 315

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE       K  ++     +
Sbjct: 316 DTFVTLPRGQAKNLKASFVLEKE-LEAPISKGDVVGKLFYQ 355


>gi|167901088|ref|ZP_02488293.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 371

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 1   TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 60

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 61  TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 120

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 121 QFVNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 180

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 181 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 240

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 241 ETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIGTPRVYKGKSNNVQVGVKKDQFITVP 300

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 301 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 331


>gi|20807406|ref|NP_622577.1| D-alanyl-D-alanine carboxypeptidase [Thermoanaerobacter
           tengcongensis MB4]
 gi|20515927|gb|AAM24181.1| D-alanyl-D-alanine carboxypeptidase [Thermoanaerobacter
           tengcongensis MB4]
          Length = 416

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 18/335 (5%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +   +                P   L+D  TG V+ +        PAS TK++TA +   
Sbjct: 13  VFAFLSVPAHAETPQPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPASTTKILTAIIALE 72

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
             K     L   +T S+N ++   ++     G  +TL+  L  L+++SAND A+AIAE +
Sbjct: 73  KGK-----LDDVVTCSENVTKIEGNSIFLSPGEQLTLEQLLYALMLESANDAAIAIAEHI 127

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----- 182
             + + F + MN  ++ +G   +HF+N +G+    HY+T  DMA ++     +       
Sbjct: 128 GGSVENFAKMMNEKAREIGAYNSHFVNPNGLPDENHYSTPYDMAQIARYAMQNAEFRKIV 187

Query: 183 ---QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               Y      K  + +     N     +   + GADG+KTG+T A+G  +VASA +   
Sbjct: 188 STLHYQIPPTNKFDKPRDLWISNRLLKPSRFHYEGADGVKTGYTVAAGQVLVASATRDGH 247

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVPNISEE 295
            LI+VI+G    N     +  LL  GF N +  K      +I          ++P I+++
Sbjct: 248 RLISVIMGDEGINI-WTDTIKLLDYGFQNFSLVKVTQKDEVITSIELGKGGFKLPLIAQK 306

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +      N+   E   KE      +K  +L 
Sbjct: 307 DFYYEVPKGKENSIKTEVVLKEDIKAPIQKGEVLG 341


>gi|170769785|ref|ZP_02904238.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia albertii
           TW07627]
 gi|170121399|gb|EDS90330.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia albertii
           TW07627]
          Length = 390

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/340 (26%), Positives = 147/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++ +  +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSSQAAENIPFSPQPPAIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV  MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVDMMNNYAEKLHLQDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P + H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G 
Sbjct: 194 IHGEPDFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIALGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +       +    N + K   D +           +   
Sbjct: 314 EQGFWMVLPKTEIPNIKAKYTLDGKELTAPIAAHQRVGEI 353


>gi|193063321|ref|ZP_03044411.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E22]
 gi|192930905|gb|EDV83509.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E22]
          Length = 403

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFSSEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|329113407|ref|ZP_08242188.1| D-alanyl-D-alanine carboxypeptidase DacC [Acetobacter pomorum
           DM001]
 gi|326697232|gb|EGE48892.1| D-alanyl-D-alanine carboxypeptidase DacC [Acetobacter pomorum
           DM001]
          Length = 406

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 4/323 (1%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                       +  +  +LD N+G  + E   D    P+SLTK+MTAYV F  LK  + 
Sbjct: 52  TPATTPVGPVDTQARWACILDYNSGATLLEKNADERMPPSSLTKMMTAYVTFGMLKSGRL 111

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   + +S+ A     S      G ++++ + ++ ++++S ND  + IAE +  +E++F
Sbjct: 112 KLDQMLPVSERAWRMQGSRMFVPLGQSVSVQDLIQGMVIQSGNDACIVIAEGISGSEEQF 171

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN+T+  LGL+ +HFMNA G     HY +ARD+A L+ R+  DFP+Y H+F  K   
Sbjct: 172 VALMNDTATKLGLTNSHFMNATGWPAENHYMSARDVAYLALRLIHDFPEYYHFFSEKEFL 231

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  N N  V   L ADG+KTG T A GF + AS+ +  + ++  + G      R +
Sbjct: 232 FNKIRQENRNSLVVKGL-ADGLKTGHTDAGGFGLCASSEREGRRVVLAVNGLPSSAARGR 290

Query: 255 VSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            +  L+   F N    + ++      +      ++  VP ++ +           N    
Sbjct: 291 EAERLMGWAFANFETAQIVSKGDVLEQAPVWMGVTQTVPLVAAQDFKILLPHGWRNGTHL 350

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
                       +   ++     
Sbjct: 351 ALDYNGPIIAPVQAGQVVGQLTV 373


>gi|258542238|ref|YP_003187671.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633316|dbj|BAH99291.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636375|dbj|BAI02344.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639428|dbj|BAI05390.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642484|dbj|BAI08439.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645539|dbj|BAI11487.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648592|dbj|BAI14533.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651645|dbj|BAI17579.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654636|dbj|BAI20563.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 406

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 4/323 (1%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                       +  +  +LD N+G  + E   D    P+SLTK+MTAYV F  LK  + 
Sbjct: 52  TPATTPVGPVDTQARWACILDYNSGATLLEKNADERMPPSSLTKMMTAYVTFGMLKSGRL 111

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   + +S+ A     S      G ++++ + ++ ++++S ND  + IAE +  +E++F
Sbjct: 112 KLDQMLPVSERAWRMQGSRMFVPLGQSVSVQDLIQGMVIQSGNDACIVIAEGISGSEEQF 171

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN+T+  LGL+ +HFMNA G     HY +ARD+A L+ R+  DFP+Y H+F  K   
Sbjct: 172 VALMNDTATKLGLTNSHFMNATGWPAENHYMSARDVAYLALRLIHDFPEYYHFFSEKEFL 231

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  N N  V   L ADG+KTG T A GF + AS+ +  + ++  + G      R +
Sbjct: 232 FNKIRQENRNSLVVKGL-ADGLKTGHTDAGGFGLCASSEREGRRVVLAVNGLPSSAARGR 290

Query: 255 VSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            +  L+   F N    + ++      +      ++  VP ++ +           N    
Sbjct: 291 EAERLMGWAFANFETAQIVSKGDVLEQAPVWMGVTQTVPLVAAQDFKILLPHGWRNGTHL 350

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
                       +   ++     
Sbjct: 351 ALDYNGPIIAPVQAGQVVGQLTV 373


>gi|317121980|ref|YP_004101983.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591960|gb|ADU51256.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
          Length = 438

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 14/324 (4%)

Query: 18  PFLSIAETNKLPYY--TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           P  +     +       ++D  +G V+     D P +PAS++KLMT  +    ++  +  
Sbjct: 73  PGQASGPGFRTQSAALLVMDAASGRVLWAKNADEPRHPASISKLMTLLLTLEAIQAGQIR 132

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   +T+S  A   P S +  + G  +T+++ +K + V SAND  VA+AE +     +FV
Sbjct: 133 LQDQVTVSPRAQGTPGSTAFLEVGERITVEDLIKAVAVASANDACVALAEYISGDVGRFV 192

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYMHYFQI---- 190
           Q MN  ++ LGL+ T F++ HG+    G+  +ARD+A+LS  +    P+ + Y  I    
Sbjct: 193 QRMNRRAQELGLTRTRFVDPHGLTDQPGNRMSARDIAVLSRYMIQYHPEILRYTSIWEDW 252

Query: 191 -KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +    +     NTN  V  + G DG+KTG T  SG ++V +A +GD   I V+LG+ D 
Sbjct: 253 LRKGTDREFWLTNTNKLVAWYEGVDGLKTGLTDESGPSVVVTARKGDDRFIVVVLGSPDS 312

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEE---VCTTQKEI 303
           NTR + ++ LL   F +                   +    EVP   EE   V     E 
Sbjct: 313 NTRWREASRLLDWAFASFDSIPIAQRGQVLRTVRVAEGRRLEVPVTVEEAFGVTVPHGEG 372

Query: 304 INYNTQMKEAKDKESHFIDFEKIT 327
                 ++ A+   +  +  +++ 
Sbjct: 373 GRVRWTLEVAEPVPAPVVPGQRVG 396


>gi|227114414|ref|ZP_03828070.1| D-alanyl-D-alanine carboxypeptidase fraction A [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227327371|ref|ZP_03831395.1| D-alanyl-D-alanine carboxypeptidase fraction A [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 403

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 15/344 (4%)

Query: 4   FLVIIAMAML----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            L I A +       N+   +          Y L+D N+G V+AE   D   +PASLTK+
Sbjct: 18  LLAISASSFAYAEDINLKTMIPGVPQIDAESYILIDYNSGKVLAEMNADTRRDPASLTKM 77

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIV 113
           MT+YV+   +K  K      +T+ K+A                K G  + +    + +I+
Sbjct: 78  MTSYVIGQAIKSGKISPNDIVTVGKDAWATGNPTFQGSSLMFLKPGDRVPVSQLNRGIIL 137

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+A+ +  ++  FV  MN   K LGL  T+F   HG+   G +++ARDMA++
Sbjct: 138 QSGNDACVAMADYVAGSQDAFVNLMNGYVKALGLKNTNFETVHGLDAPGQFSSARDMALI 197

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
              +  D P+    ++ K       + PN N     + L  DG+KTG T ++GFN+VASA
Sbjct: 198 GQALIRDVPEEYATYKEKEFTFNNIRQPNRNGLLWDSSLNVDGIKTGHTSSAGFNLVASA 257

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNE 288
            +G   LI+ +LG  +   R   S  LL+ GF        +        +  +  +    
Sbjct: 258 TEGQMRLISAVLGGRNAKGRESESKKLLTWGFRFFETVAPLKAGKEFASEPVWFGDSDRV 317

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + ++   T       + +     D         K  ++ + 
Sbjct: 318 ALGVEKDAYLTIPRGRMKDLKASYVLDNTELHAPLAKNQVVGSI 361


>gi|170767905|ref|ZP_02902358.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia albertii
           TW07627]
 gi|170123393|gb|EDS92324.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia albertii
           TW07627]
          Length = 403

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFRGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYAIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGRETESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  N       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGNSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|193062785|ref|ZP_03043878.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E22]
 gi|331683696|ref|ZP_08384292.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli H299]
 gi|192931428|gb|EDV84029.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E22]
 gi|331078648|gb|EGI49850.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli H299]
          Length = 388

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G   LIAVI+GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQHRLIAVIMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|260892123|ref|YP_003238220.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ammonifex
           degensii KC4]
 gi|260864264|gb|ACX51370.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ammonifex
           degensii KC4]
          Length = 392

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 18/314 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ +       +    +     K     L++  TG ++    P+    PAS TK++TA V
Sbjct: 7   VIALIFVFFLGLGQAWAAPPEVKAEAAVLMEAETGQILYAKNPEERMYPASTTKILTALV 66

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           V    +     L   I  S  A     S+   K+G  +++ +AL  L++ SAND+AVA+A
Sbjct: 67  VLQHAR-----LNDQIVASPEAVGTEGSSIWLKEGEKLSVKDALYALLLNSANDVAVALA 121

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           + +  +   F Q MN T++  G +++HF N HG+    HYTTA D+A ++     +   +
Sbjct: 122 QKVSGSIPAFAQLMNETARACGATSSHFTNPHGLPDPEHYTTALDLARITRVALGNRL-F 180

Query: 185 MHYFQIKGLEIKGKKYP------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                 K         P      N N  +  + GA G+KTG+T A+G  +VA+A +  + 
Sbjct: 181 REIVATKTYTFHRPTLPEPFVLVNHNKLLWRYEGAIGVKTGYTTAAGQCLVAAAQRNGRE 240

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           LIAVIL +         +  LL  GF      +                E+P  ++ +  
Sbjct: 241 LIAVILKSEGTEV-WNDAVKLLDYGFNAFKPVELFKKGETL-----GQAEIPGGNQPLLL 294

Query: 299 TQKEIINYNTQMKE 312
              E   Y    +E
Sbjct: 295 IAGESFIYYVPTEE 308


>gi|311278994|ref|YP_003941225.1| Beta-lactamase [Enterobacter cloacae SCF1]
 gi|308748189|gb|ADO47941.1| Beta-lactamase [Enterobacter cloacae SCF1]
          Length = 395

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 14/336 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I+ A  ++  P        +   + L+D  TG ++         NPASLTKLMT YVV  
Sbjct: 23  ISCAFAADALPITVSPPAIQAGAWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDR 82

Query: 68  FLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAV 121
            +  +K      +T+  +A                K G  +T+ +  + LIV S ND  V
Sbjct: 83  AIDSRKITPDDMVTVGHDAWAKGNPVFDGSSLMFLKPGDRLTVRDLSRGLIVDSGNDACV 142

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+A+ +   + +FVQ MN   + LGL  THF   HG+   G +++A D+A+LS  I    
Sbjct: 143 ALADYVAGGQPQFVQLMNGYVQKLGLKDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGE 202

Query: 182 PQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P + H +  K L   G    N N       +  DG+KTG T  +GFN++ASA+ G++ LI
Sbjct: 203 PDFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASAVDGERRLI 262

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEV 296
           AV++GA     R + +  LL  G  N    + ++   +      +  +         ++ 
Sbjct: 263 AVVMGAESAKGREEQARKLLHWGQQNFDTVQILHSGKQVGSERIWYGDKEQIRLGTDQDF 322

Query: 297 CTTQKEIINYNTQMKE---AKDKESHFIDFEKITLL 329
                +    N + K    AK+ ++     +++  +
Sbjct: 323 WLALPKAEVPNIKAKYVLDAKELDAPIAAHQRVGEI 358


>gi|170021011|ref|YP_001725965.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           ATCC 8739]
 gi|193069040|ref|ZP_03049998.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E110019]
 gi|256023756|ref|ZP_05437621.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia sp.
           4_1_40B]
 gi|300951129|ref|ZP_07164994.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           116-1]
 gi|300959200|ref|ZP_07171279.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           175-1]
 gi|301028891|ref|ZP_07192063.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           196-1]
 gi|307137249|ref|ZP_07496605.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           H736]
 gi|331641134|ref|ZP_08342269.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli H736]
 gi|1778549|gb|AAB40832.1| penicillin-binding protein 5 [Escherichia coli]
 gi|169755939|gb|ACA78638.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli ATCC
           8739]
 gi|192957584|gb|EDV88029.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E110019]
 gi|260450201|gb|ACX40623.1| Serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli DH1]
 gi|299878139|gb|EFI86350.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           196-1]
 gi|300314185|gb|EFJ63969.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           175-1]
 gi|300449584|gb|EFK13204.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           116-1]
 gi|323938394|gb|EGB34648.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1520]
 gi|323943047|gb|EGB39206.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E482]
 gi|323972087|gb|EGB67301.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TA007]
 gi|331037932|gb|EGI10152.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli H736]
          Length = 427

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 34  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 93

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 94  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 153

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 154 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 213

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 214 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 273

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 274 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 333

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 334 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 385


>gi|237732061|ref|ZP_04562542.1| DacD [Citrobacter sp. 30_2]
 gi|226907600|gb|EEH93518.1| DacD [Citrobacter sp. 30_2]
          Length = 421

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 146/349 (41%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMAMLSN-------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++  +S        +  F           + L+D  TG ++         NPA
Sbjct: 36  RRLFIAASLFAMSFSPAYATDVASFAPQPPAINAGAWVLMDYTTGQILTAGNEHQQRNPA 95

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +  K+   T  +T+ ++A                K+G  +++ +  
Sbjct: 96  SLTKLMTGYVVDRAIDSKRISPTDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 155

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MNN  + L L  THF   HG+   G +++A 
Sbjct: 156 RGLIVDSGNDACVALADYIAGGQPQFVAMMNNYVQKLNLRDTHFETVHGLDAPGQHSSAY 215

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P + H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 216 DLAVLSRAIIHGEPDFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFN 275

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R   +  LL  G  N    + +    +      +  
Sbjct: 276 LIASAVDGQRRLIAVVMGAESAKGREDQARKLLQWGQQNFDTVQVLRSGKQVGIERIWYG 335

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +         ++      +    N + K   DK+           +   
Sbjct: 336 DKEKISLGTEQDFWMALPKAEVANIKAKYVLDKKELVAPIAAHQRVGEI 384


>gi|15800346|ref|NP_286358.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 EDL933]
 gi|16128615|ref|NP_415165.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli str. K-12 substr. MG1655]
 gi|26246612|ref|NP_752652.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           CFT073]
 gi|74311168|ref|YP_309587.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella sonnei
           Ss046]
 gi|82775901|ref|YP_402248.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella
           dysenteriae Sd197]
 gi|89107501|ref|AP_001281.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli str. K-12
           substr. W3110]
 gi|91209679|ref|YP_539665.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           UTI89]
 gi|110640861|ref|YP_668589.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           536]
 gi|117622848|ref|YP_851761.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           APEC O1]
 gi|157159257|ref|YP_001461799.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           E24377A]
 gi|168770236|ref|ZP_02795243.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4486]
 gi|168778083|ref|ZP_02803090.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4196]
 gi|168779124|ref|ZP_02804131.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4076]
 gi|168786481|ref|ZP_02811488.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC869]
 gi|170080211|ref|YP_001729531.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170080312|ref|YP_001729632.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170683720|ref|YP_001742748.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           SMS-3-5]
 gi|188495416|ref|ZP_03002686.1| penicillin-binding protein 5 [Escherichia coli 53638]
 gi|191167358|ref|ZP_03029174.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B7A]
 gi|191172298|ref|ZP_03033840.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli F11]
 gi|194437465|ref|ZP_03069562.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli 101-1]
 gi|208808249|ref|ZP_03250586.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208815700|ref|ZP_03256879.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208823277|ref|ZP_03263595.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209398518|ref|YP_002269267.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4115]
 gi|209917890|ref|YP_002291974.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           SE11]
 gi|215485672|ref|YP_002328103.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217326125|ref|ZP_03442209.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. TW14588]
 gi|218553174|ref|YP_002386087.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           IAI1]
 gi|218557570|ref|YP_002390483.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           S88]
 gi|218688455|ref|YP_002396667.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           ED1a]
 gi|218694072|ref|YP_002401739.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           55989]
 gi|218699004|ref|YP_002406633.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           IAI39]
 gi|218703966|ref|YP_002411485.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           UMN026]
 gi|227884389|ref|ZP_04002194.1| serine family D-Ala-D-Ala carboxypeptidase [Escherichia coli 83972]
 gi|237707395|ref|ZP_04537876.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia sp.
           3_2_53FAA]
 gi|238899909|ref|YP_002925705.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli BW2952]
 gi|253774382|ref|YP_003037213.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160714|ref|YP_003043822.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli B
           str. REL606]
 gi|254791798|ref|YP_003076635.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. TW14359]
 gi|256020584|ref|ZP_05434449.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella sp. D9]
 gi|260842858|ref|YP_003220636.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O103:H2 str.
           12009]
 gi|260853884|ref|YP_003227775.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O26:H11 str.
           11368]
 gi|260866780|ref|YP_003233182.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O111:H- str.
           11128]
 gi|261224099|ref|ZP_05938380.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261257793|ref|ZP_05950326.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281583|ref|YP_003498401.1| D-alanyl-D-alanine carboxypeptidase dacA precursor [Escherichia
           coli O55:H7 str. CB9615]
 gi|293403894|ref|ZP_06647888.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           FVEC1412]
 gi|293408757|ref|ZP_06652596.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293413928|ref|ZP_06656577.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           B185]
 gi|293418743|ref|ZP_06661178.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           B088]
 gi|297519791|ref|ZP_06938177.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           OP50]
 gi|298379670|ref|ZP_06989275.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           FVEC1302]
 gi|300817851|ref|ZP_07098065.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           107-1]
 gi|300823054|ref|ZP_07103188.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           119-7]
 gi|300901139|ref|ZP_07119246.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           198-1]
 gi|300907806|ref|ZP_07125423.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 84-1]
 gi|300920556|ref|ZP_07136981.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           115-1]
 gi|300927270|ref|ZP_07142998.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           182-1]
 gi|300931564|ref|ZP_07146878.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           187-1]
 gi|300937897|ref|ZP_07152688.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 21-1]
 gi|300990039|ref|ZP_07179081.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 45-1]
 gi|300996738|ref|ZP_07181525.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           200-1]
 gi|301025238|ref|ZP_07188805.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 69-1]
 gi|301049826|ref|ZP_07196766.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           185-1]
 gi|301302111|ref|ZP_07208244.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           124-1]
 gi|301329153|ref|ZP_07222150.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 78-1]
 gi|306812936|ref|ZP_07447129.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           NC101]
 gi|307312652|ref|ZP_07592284.1| Beta-lactamase [Escherichia coli W]
 gi|309785937|ref|ZP_07680566.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella dysenteriae
           1617]
 gi|309795501|ref|ZP_07689918.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           145-7]
 gi|312965077|ref|ZP_07779314.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 2362-75]
 gi|312970712|ref|ZP_07784893.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1827-70]
 gi|331645789|ref|ZP_08346892.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli M605]
 gi|331651643|ref|ZP_08352662.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli M718]
 gi|331656658|ref|ZP_08357620.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli TA206]
 gi|331676290|ref|ZP_08377002.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli H591]
 gi|331682055|ref|ZP_08382679.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli H299]
 gi|332281770|ref|ZP_08394183.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella sp. D9]
 gi|83288470|sp|P0AEB4|DACA_ECO57 RecName: Full=D-alanyl-D-alanine carboxypeptidase dacA;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 5; Short=PBP-5; Flags:
           Precursor
 gi|83288471|sp|P0AEB3|DACA_ECOL6 RecName: Full=D-alanyl-D-alanine carboxypeptidase dacA;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 5; Short=PBP-5; Flags:
           Precursor
 gi|83288472|sp|P0AEB2|DACA_ECOLI RecName: Full=D-alanyl-D-alanine carboxypeptidase dacA;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Beta-lactamase; AltName: Full=Penicillin-binding
           protein 5; Short=PBP-5; Flags: Precursor
 gi|12513533|gb|AAG54966.1|AE005242_10 D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Escherichia coli O157:H7 str. EDL933]
 gi|26107011|gb|AAN79195.1|AE016757_99 Penicillin-binding protein 5 precursor [Escherichia coli CFT073]
 gi|41212|emb|CAA29774.1| unnamed protein product [Escherichia coli K-12]
 gi|1651259|dbj|BAA35275.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli str. K12
           substr. W3110]
 gi|1786851|gb|AAC73733.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli str. K-12 substr. MG1655]
 gi|73854645|gb|AAZ87352.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella sonnei
           Ss046]
 gi|81240049|gb|ABB60759.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Shigella
           dysenteriae Sd197]
 gi|91071253|gb|ABE06134.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Escherichia coli UTI89]
 gi|110342453|gb|ABG68690.1| D-alanyl-D-alanine carboxypeptidas, penicillin-binding protein 5
           [Escherichia coli 536]
 gi|115511972|gb|ABJ00047.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Escherichia coli APEC O1]
 gi|157081287|gb|ABV20995.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli E24377A]
 gi|169888046|gb|ACB01753.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|169888147|gb|ACB01854.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170521438|gb|ACB19616.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli SMS-3-5]
 gi|187766838|gb|EDU30682.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188490615|gb|EDU65718.1| penicillin-binding protein 5 [Escherichia coli 53638]
 gi|189002783|gb|EDU71769.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189360912|gb|EDU79331.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189373492|gb|EDU91908.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC869]
 gi|190902607|gb|EDV62340.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli B7A]
 gi|190907397|gb|EDV66994.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli F11]
 gi|194423634|gb|EDX39624.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli 101-1]
 gi|208728050|gb|EDZ77651.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208732348|gb|EDZ81036.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208737470|gb|EDZ85154.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209159918|gb|ACI37351.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. EC4115]
 gi|209777148|gb|ACI86886.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli]
 gi|209777150|gb|ACI86887.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli]
 gi|209777152|gb|ACI86888.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli]
 gi|209777154|gb|ACI86889.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli]
 gi|209777156|gb|ACI86890.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli]
 gi|209911149|dbj|BAG76223.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli SE11]
 gi|215263744|emb|CAS08080.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217322346|gb|EEC30770.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli O157:H7
           str. TW14588]
 gi|218350804|emb|CAU96496.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli 55989]
 gi|218359942|emb|CAQ97485.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli IAI1]
 gi|218364339|emb|CAR02013.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli S88]
 gi|218368990|emb|CAR16744.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli IAI39]
 gi|218426019|emb|CAR06836.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli ED1a]
 gi|218431063|emb|CAR11939.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli UMN026]
 gi|222032392|emb|CAP75131.1| Penicillin-binding protein 5 [Escherichia coli LF82]
 gi|226898605|gb|EEH84864.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia sp.
           3_2_53FAA]
 gi|227838475|gb|EEJ48941.1| serine family D-Ala-D-Ala carboxypeptidase [Escherichia coli 83972]
 gi|238860729|gb|ACR62727.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli BW2952]
 gi|242376408|emb|CAQ31107.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Escherichia coli BL21(DE3)]
 gi|253325426|gb|ACT30028.1| Beta-lactamase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972615|gb|ACT38286.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli B str. REL606]
 gi|253976809|gb|ACT42479.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli BL21(DE3)]
 gi|254591198|gb|ACT70559.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli O157:H7 str. TW14359]
 gi|257752533|dbj|BAI24035.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O26:H11 str.
           11368]
 gi|257758005|dbj|BAI29502.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O103:H2 str.
           12009]
 gi|257763136|dbj|BAI34631.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O111:H- str.
           11128]
 gi|281177781|dbj|BAI54111.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli SE15]
 gi|284920432|emb|CBG33493.1| penicillin-binding protein 5 (D-alanyl-D-alanine carboxypeptidase)
           [Escherichia coli 042]
 gi|290761456|gb|ADD55417.1| D-alanyl-D-alanine carboxypeptidase dacA precursor [Escherichia
           coli O55:H7 str. CB9615]
 gi|291325271|gb|EFE64686.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           B088]
 gi|291428480|gb|EFF01505.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           FVEC1412]
 gi|291433986|gb|EFF06959.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           B185]
 gi|291471935|gb|EFF14418.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294492617|gb|ADE91373.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli IHE3034]
 gi|298279368|gb|EFI20876.1| D-alanyl-D-alanine carboxypeptidase fraction C [Escherichia coli
           FVEC1302]
 gi|300298421|gb|EFJ54806.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           185-1]
 gi|300304453|gb|EFJ58973.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           200-1]
 gi|300355406|gb|EFJ71276.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           198-1]
 gi|300396141|gb|EFJ79679.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 69-1]
 gi|300400495|gb|EFJ84033.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 84-1]
 gi|300407211|gb|EFJ90749.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 45-1]
 gi|300412458|gb|EFJ95768.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           115-1]
 gi|300416758|gb|EFK00069.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           182-1]
 gi|300457097|gb|EFK20590.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 21-1]
 gi|300460633|gb|EFK24126.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           187-1]
 gi|300524403|gb|EFK45472.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           119-7]
 gi|300529548|gb|EFK50610.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           107-1]
 gi|300842663|gb|EFK70423.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           124-1]
 gi|300844500|gb|EFK72260.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 78-1]
 gi|305853699|gb|EFM54138.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           NC101]
 gi|306907354|gb|EFN37859.1| Beta-lactamase [Escherichia coli W]
 gi|307552502|gb|ADN45277.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli ABU 83972]
 gi|307627930|gb|ADN72234.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           UM146]
 gi|308120876|gb|EFO58138.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           145-7]
 gi|308926048|gb|EFP71526.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella dysenteriae
           1617]
 gi|309700870|emb|CBJ00167.1| penicillin-binding protein 5 (D-alanyl-D-alanine carboxypeptidase)
           [Escherichia coli ETEC H10407]
 gi|310337361|gb|EFQ02499.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1827-70]
 gi|312290168|gb|EFR18051.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 2362-75]
 gi|312945179|gb|ADR26006.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315059887|gb|ADT74214.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia coli W]
 gi|315135298|dbj|BAJ42457.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           DH1]
 gi|315255065|gb|EFU35033.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 85-1]
 gi|315287076|gb|EFU46490.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           110-3]
 gi|315292098|gb|EFU51450.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           153-1]
 gi|315299178|gb|EFU58432.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 16-3]
 gi|320178421|gb|EFW53389.1| D-alanyl-D-alanine carboxypeptidase [Shigella boydii ATCC 9905]
 gi|320193039|gb|EFW67679.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320194186|gb|EFW68818.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli WV_060327]
 gi|320198242|gb|EFW72846.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli EC4100B]
 gi|320638081|gb|EFX07845.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. G5101]
 gi|320643487|gb|EFX12657.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H- str. 493-89]
 gi|320648822|gb|EFX17449.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H- str. H 2687]
 gi|320654408|gb|EFX22455.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320660089|gb|EFX27619.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664886|gb|EFX32021.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323153647|gb|EFZ39895.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli EPECa14]
 gi|323158915|gb|EFZ44926.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli E128010]
 gi|323179892|gb|EFZ65449.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1180]
 gi|323185014|gb|EFZ70381.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli 1357]
 gi|323191270|gb|EFZ76534.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli RN587/1]
 gi|323379549|gb|ADX51817.1| Beta-lactamase [Escherichia coli KO11]
 gi|323945107|gb|EGB41169.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H120]
 gi|323952790|gb|EGB48658.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H252]
 gi|323958390|gb|EGB54096.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H263]
 gi|323963201|gb|EGB58769.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H489]
 gi|323967579|gb|EGB62995.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli M863]
 gi|323976385|gb|EGB71475.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TW10509]
 gi|324006310|gb|EGB75529.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 57-2]
 gi|324010472|gb|EGB79691.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 60-1]
 gi|324016087|gb|EGB85306.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           117-3]
 gi|324116706|gb|EGC10621.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1167]
 gi|326341383|gb|EGD65175.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           1044]
 gi|326345839|gb|EGD69578.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           1125]
 gi|327254316|gb|EGE65938.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli STEC_7v]
 gi|330910393|gb|EGH38903.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli AA86]
 gi|331044541|gb|EGI16668.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli M605]
 gi|331049921|gb|EGI21979.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli M718]
 gi|331054906|gb|EGI26915.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli TA206]
 gi|331076348|gb|EGI47630.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli H591]
 gi|331080734|gb|EGI51908.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli H299]
 gi|332096835|gb|EGJ01825.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella dysenteriae
           155-74]
 gi|332104122|gb|EGJ07468.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella sp. D9]
 gi|332341978|gb|AEE55312.1| D-alanyl-D-alanine carboxypeptidase DacC [Escherichia coli UMNK88]
          Length = 403

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|260844620|ref|YP_003222398.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O103:H2 str.
           12009]
 gi|257759767|dbj|BAI31264.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O103:H2 str.
           12009]
          Length = 388

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFTAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++ASA+ G   LIAVI+GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASAVDGQHRLIAVIMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 351


>gi|76808683|ref|YP_332034.1| penicillin-binding protein 6 [Burkholderia pseudomallei 1710b]
 gi|134279982|ref|ZP_01766694.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei 305]
 gi|167822505|ref|ZP_02453976.1| penicillin-binding protein 6 [Burkholderia pseudomallei 9]
 gi|217420171|ref|ZP_03451677.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|226193704|ref|ZP_03789307.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           Pakistan 9]
 gi|254258059|ref|ZP_04949113.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           1710a]
 gi|76578136|gb|ABA47611.1| penicillin-binding protein 6 [Burkholderia pseudomallei 1710b]
 gi|134249182|gb|EBA49264.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei 305]
 gi|217397475|gb|EEC37491.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|225934282|gb|EEH30266.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           Pakistan 9]
 gi|254216748|gb|EET06132.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           1710a]
          Length = 437

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 67  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 126

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 127 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 187 QFVNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 246

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 247 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 307 ETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 367 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 397


>gi|294338753|emb|CAZ87085.1| putative Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Thiomonas sp. 3As]
          Length = 393

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 10/323 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                       + ++D  +G ++AE+       PASLTKLMTAY+ F  LKE    L  
Sbjct: 34  ATVPPPKLDARAWLVVDLTSGQILAEHDAHAQEAPASLTKLMTAYLTFKALKEGTIKLNQ 93

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T SK A +   S         +++++ L  +IV+S ND A+ +A+++  +   FV  M
Sbjct: 94  MVTESKEAWQTGGSRMFIDPRVPVSVNDLLLGMIVQSGNDAAMTLAQTVGGSVSAFVAMM 153

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQIKGLEIKG 197
           N  ++  GL  THFM+  G+   GH+TTA D++I++  I  DFP     YF++K      
Sbjct: 154 NRQAQQWGLKGTHFMDPTGLPDPGHHTTAYDLSIIATHIIRDFPADYARYFKVKEFTYNH 213

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ----GDQSLIAVILGALDRNTRN 253
              PN    + T    DGMKTG+T  +G+ ++ SA++    G + L+ V++G      R 
Sbjct: 214 ITQPNRVSLLFTDPSVDGMKTGYTSEAGYCMITSALRQFPNGPRRLLTVVMGTPTERARG 273

Query: 254 KVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
           + S  LL+  + N  D    +          ++   +      S  V  +    +  + Q
Sbjct: 274 EESQVLLNWAYQNFDDIVLASPGKPVLTAPVWKGVDNKVELGSSVPVVISVPRGMGKDLQ 333

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
            K  +  +      +    +   
Sbjct: 334 TKVVR-PDPLVAPLQAGQRVGQL 355


>gi|15612584|ref|NP_240887.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus halodurans
           C-125]
 gi|10172633|dbj|BAB03740.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus halodurans
           C-125]
          Length = 444

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/363 (22%), Positives = 146/363 (40%), Gaps = 32/363 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + F++++AMAM+ ++F      + A   +     L+D  +G ++     D     AS+TK
Sbjct: 7   KWFILVLAMAMVFSMFTPAMTANAAFELEAESAILVDAESGKILYGKNIDAVLPTASMTK 66

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVK 114
           +M+ Y++   + E +      + IS            SN   ++  T T+    + + + 
Sbjct: 67  MMSEYLILEAINEGEISWDQEVPISDYVRELSLYVQLSNVPLRQDETYTVKELYESVAIY 126

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------------ 162
           SAN   +A+AE +  +E  FVQ MN   + LGL    F+N+ G+                
Sbjct: 127 SANASTIALAELIAGSESAFVQRMNEKGEELGLEDFKFVNSSGLNNKDLLGNHPEGTDAN 186

Query: 163 --HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA------VGT 209
             +  +AR  A L++ +  D+P+ +    I     +       +  N NW          
Sbjct: 187 AENVMSARATAKLAYNLLKDYPEVLETASIPEKTFRAGEGEEIEMENWNWMLKGIRPQHD 246

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           + G DG+KTG+T  +G     +A +    LI+V++    R+ R K +A LL  GF N T 
Sbjct: 247 YEGIDGLKTGYTAEAGNCFTGTAERNGMRLISVVMRTETRDDRFKETAKLLDYGFNNFTH 306

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            + +    +    Q L        E   +T + +       +E        ID   +   
Sbjct: 307 TEVLPAGFQPAEAQTLPVSSGKEREVSISTSEPLHAVVRNGEEELYDPVVTIDESSLDED 366

Query: 330 KNK 332
              
Sbjct: 367 GGL 369


>gi|310766969|gb|ADP11919.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Erwinia sp.
           Ejp617]
          Length = 411

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 150/353 (42%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    + +A+  N+  +         +          Y L+D N+G V+AE   D   
Sbjct: 17  LKRLTAGMLIALSLNVVAYADDVNIKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 76

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 77  DPASLTKMMTSYVIGQAIKAGKIHQDDMVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 136

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  +++ FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 137 QLTRGIVLQSGNDACVAMADYVAGSQETFVGLMNNYVKALGLQNTHFQTVHGLDADGQYS 196

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T ++
Sbjct: 197 SARDMALIGRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTESA 256

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           G+N+VASA +G    LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 257 GYNLVASATEGQQMRLISTVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEP 316

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  N       + ++V  T       + +              +K  ++   
Sbjct: 317 VWFGNSDRVQLGVEKDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVVGTI 369


>gi|283479159|emb|CAY75075.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Erwinia pyrifoliae
           DSM 12163]
          Length = 411

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/353 (24%), Positives = 150/353 (42%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    + +A+  N+  +         +          Y L+D N+G V+AE   D   
Sbjct: 17  LKRLTAGMLIALSLNVVAYADDVNIKTMIPGVPDIDAEAYVLIDYNSGKVLAEKNADARR 76

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+ K+A                K G  + + 
Sbjct: 77  DPASLTKMMTSYVIGQAIKAGKIHQDDMVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVS 136

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + ++++S ND  VA+A+ +  +++ FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 137 QLTRGIVLQSGNDACVAMADYVAGSQETFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYS 196

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     +  K       +  N N     T L  DG+KTG T ++
Sbjct: 197 SARDMALIGRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTESA 256

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           G+N+VASA +G    LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 257 GYNLVASATEGQQMRLISTVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEP 316

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  N       + ++V  T       + +              +K  ++   
Sbjct: 317 VWFGNSDRVQLGVEKDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVVGTI 369


>gi|225570661|ref|ZP_03779684.1| hypothetical protein CLOHYLEM_06761 [Clostridium hylemonae DSM
           15053]
 gi|225160488|gb|EEG73107.1| hypothetical protein CLOHYLEM_06761 [Clostridium hylemonae DSM
           15053]
          Length = 423

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/392 (26%), Positives = 165/392 (42%), Gaps = 56/392 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET----------------------------------- 25
           M++F  ++    L      L+                                       
Sbjct: 1   MKRFFALLICVFLCTQSVALAAPPDNTLLYEEDTGQEQEKNNEAGADDGTDAGSDSESGQ 60

Query: 26  -------NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                     P   L++ +TG VI E   D    PAS+TK+MT  ++F  LK+ K  L  
Sbjct: 61  DAASGLTVSAPSAVLMEASTGQVIYEKDADEQRPPASVTKIMTLLLIFDALKDGKIKLDD 120

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            ++ S+ A+    S    + G T T+D  +K + V SAND  VA+AE +C  E++FV++M
Sbjct: 121 SVSTSEFAASMGGSQVFLEPGETQTVDTMIKCIAVASANDACVAMAEYICGNEEEFVKNM 180

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K LG++ THF+N +G+   GH TTARD+A++S  + T +PQ   Y  I    I   
Sbjct: 181 NERAKGLGMTNTHFVNCNGLDTDGHLTTARDIALMSRELITTYPQIRDYSMIWMENITHT 240

Query: 199 K--------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                      NTN  V  +  A G+KTG T  + + + A+A +    LIAVI+ A D  
Sbjct: 241 TNKGTTEFGLTNTNKLVRQYEYATGLKTGSTDKAKYCVSATAEKNGMELIAVIMAAPDHK 300

Query: 251 TRNKVSASLLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEE---VCTTQKEII 304
            R   + +LL+ GF       + K  +       +          +E    + TT  ++ 
Sbjct: 301 ARFSDATTLLNYGFGKCNKYEEDKIASIKPVSLSRGVKKTVKAEQTEPFAYIDTTGADLN 360

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +    K  ++      KI  +K  +  K
Sbjct: 361 SIEKKKVMKKKLKAPIKKGTKIGEMKYYLAGK 392


>gi|157369871|ref|YP_001477860.1| Serine-type D-Ala-D-Ala carboxypeptidase [Serratia proteamaculans
           568]
 gi|157321635|gb|ABV40732.1| Serine-type D-Ala-D-Ala carboxypeptidase [Serratia proteamaculans
           568]
          Length = 401

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/346 (26%), Positives = 158/346 (45%), Gaps = 14/346 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---KLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++    +++ +L+      + A          Y L+D N+G ++AE   D   +PASLT
Sbjct: 10  LKKLTFSVSILLLAVPVVQAAEAPAAPQVDAKAYVLMDYNSGKILAEGNADTRLDPASLT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A                K G  + +    K +
Sbjct: 70  KIMSSYVIGQAIKAGKIKPEDMVTVGKDAWATGNPALRGSSLMFIKPGDQVPVMELNKGI 129

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MNN +K+LGL  THF+  HG+   G Y+TARDMA
Sbjct: 130 VIQSGNDASIALADYVAGSQDSFVGLMNNYAKSLGLQNTHFLTVHGLDAEGQYSTARDMA 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +L   +  D P      + K       +  N N     T L  DG+KTG+T  +G N+VA
Sbjct: 190 LLGQALIRDVPDEYALHKEKEFTFNKIRQVNRNRLLWSTNLSVDGIKTGYTGGAGHNLVA 249

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LL+ GF        I      + +  +  ++ 
Sbjct: 250 SATDGPMRLISVVLGAPSDRIRFSESEKLLTWGFRFYETATPIKTDKPFVTQKVWFGDVG 309

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++++   T  +    N +     ++ +      K  ++   
Sbjct: 310 EVPLGVAKDAAVTIPKGQMKNLKASYKLNQPTLEAPLAKNQVVGTI 355


>gi|218549792|ref|YP_002383583.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia
           fergusonii ATCC 35469]
 gi|218357333|emb|CAQ89970.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Escherichia fergusonii ATCC 35469]
 gi|324114754|gb|EGC08722.1| D-alanyl-D-alanine carboxypeptidase [Escherichia fergusonii B253]
 gi|325498188|gb|EGC96047.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia
           fergusonii ECD227]
          Length = 403

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/352 (24%), Positives = 147/352 (41%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAML---------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+             NI   +  A       + L+D N+G V+AE   D   
Sbjct: 10  MQRLALTTALCTAAISGAHADDLNIKTMIPGAPQIDAEAWILIDYNSGKVLAEQNADTRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADYAAGSQDAFVGLMNSYVNALGLKNTHFETVHGLDAEGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYAIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTNQA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDNDRASLGVDKDVYLTIPRGRLKDLKASYVLNTPELHAPLQKNQVVGTI 361


>gi|315618015|gb|EFU98607.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 3431]
          Length = 390

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  ++    +   PF           + L+D  TG ++         NPASLTKLMT Y
Sbjct: 14  FVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ ++A                K+G  +++ +  + LIV S N
Sbjct: 74  VVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIVDSGN 133

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+LS  I
Sbjct: 134 DACVALADYIAGGQRQFVKMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 193

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P++ H +  K L   G    N N       +  DG+KTG T  +GFN++A A+ G 
Sbjct: 194 IHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIALAVDGQ 253

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N     
Sbjct: 254 RRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENIDLGT 313

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +E      +    + + K   D +           +   
Sbjct: 314 EQEFWMVLPKAEIPHIKAKYTVDGKELTAPISAHQRVGEI 353


>gi|331666984|ref|ZP_08367858.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli TA271]
 gi|331066208|gb|EGI38092.1| D-alanyl-D-alanine carboxypeptidase DacA [Escherichia coli TA271]
          Length = 403

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|192293106|ref|YP_001993711.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris TIE-1]
 gi|192286855|gb|ACF03236.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 483

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/314 (32%), Positives = 168/314 (53%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               +++ +     +          L++ +TG V+  +   +PW+PAS+TKLMT YV   
Sbjct: 14  FLTIVVAALLSLTVLPRVANAEALLLIEADTGKVLQADNATYPWHPASVTKLMTLYVTLQ 73

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K+ +    T +T+S  AS   PS   F+ G+ +T+DNALK+++VKSAND+AV +AE +
Sbjct: 74  AVKQGRLTPDTLLTVSPIASAQSPSKMGFRAGTQVTVDNALKMMMVKSANDMAVVLAEGV 133

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +   F   MN+T+  LG++ TH++N +G+      T+ARD+AIL+  I  D P+Y +Y
Sbjct: 134 GGSIDGFSAMMNDTAARLGMTQTHYVNPNGLPADEQVTSARDLAILARAIIRDLPEYEYY 193

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             I  +    +   N N  +G + GADG KTGF CASG+N+VASA +  + LIAV+LGA 
Sbjct: 194 VHIPAIRFGKRVTRNFNKLIGRYPGADGFKTGFICASGYNLVASATRNGRRLIAVVLGAN 253

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               R   +A LL  GF   T       +        ++   P++ +E+C  +++    +
Sbjct: 254 SGQDRAVKAAQLLERGFSTNTLAWLTPSLGTVDNLAPIAAAPPDLRDEMCGPKRKRPASD 313

Query: 308 TQMKEAKDKESHFI 321
                A     + +
Sbjct: 314 EDETVANALSGNPV 327


>gi|39937326|ref|NP_949602.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris CGA009]
 gi|39651184|emb|CAE29707.1| possible D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein) [Rhodopseudomonas palustris CGA009]
          Length = 484

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 103/314 (32%), Positives = 168/314 (53%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               +++ +     +          L++ +TG V+  +   +PW+PAS+TKLMT YV   
Sbjct: 14  FLTIVVAALLSLTVLPRVANAEALLLIEADTGKVLQADNATYPWHPASVTKLMTLYVTLQ 73

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K+ +    T +T+S  AS   PS   F+ G+ +T+DNALK+++VKSAND+AV +AE +
Sbjct: 74  AVKQGRLTPDTLLTVSPIASAQSPSKMGFRAGTQVTVDNALKMMMVKSANDMAVVLAEGV 133

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +   F   MN+T+  LG++ TH++N +G+      T+ARD+AIL+  I  D P+Y +Y
Sbjct: 134 GGSIDGFSAMMNDTAARLGMTQTHYVNPNGLPADEQVTSARDLAILARAIIRDLPEYEYY 193

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             I  +    +   N N  +G + GADG KTGF CASG+N+VASA +  + LIAV+LGA 
Sbjct: 194 VHIPAIRFGKRVTRNFNKLIGRYPGADGFKTGFICASGYNLVASATRNGRRLIAVVLGAN 253

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               R   +A LL  GF   T       +        ++   P++ +E+C  +++    +
Sbjct: 254 SGQDRAVKAAQLLERGFSTNTLAWLTPSLGTVDNLAPIAAAPPDLRDEMCGPKRKRPASD 313

Query: 308 TQMKEAKDKESHFI 321
                A     + +
Sbjct: 314 EDETVANALSGNPV 327


>gi|126441761|ref|YP_001057491.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei 668]
 gi|237810642|ref|YP_002895093.1| D-alanyl-D-alanine carboxypeptidase DacC [Burkholderia pseudomallei
           MSHR346]
 gi|254187919|ref|ZP_04894431.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|126221254|gb|ABN84760.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           668]
 gi|157935599|gb|EDO91269.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|237504177|gb|ACQ96495.1| D-alanyl-D-alanine carboxypeptidase DacC [Burkholderia pseudomallei
           MSHR346]
          Length = 437

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 67  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 126

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 127 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 187 QFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 246

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 247 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 307 ETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 367 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 397


>gi|192291489|ref|YP_001992094.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris TIE-1]
 gi|192285238|gb|ACF01619.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 413

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/317 (25%), Positives = 128/317 (40%), Gaps = 8/317 (2%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                + P   L+D  +G V+ E   D    P+S+ KLMT   VF  LK     LT    
Sbjct: 47  SGFEAQAPSAILVDAESGSVLFEKNADELRAPSSMMKLMTVETVFHLLKTGDLQLTQEYR 106

Query: 82  ISKNAS-----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +S+NA          S    +  S +++DN L   I++S ND  + +AE +  +E  FV+
Sbjct: 107 VSENAWRNGGAPAGGSTMFAEIHSIISVDNLLHGAIIQSGNDSCMVLAEGIAGSEAAFVE 166

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M   ++ +GL+ + F N+ G+    +  + R++A L+  I   +P+Y   F  K     
Sbjct: 167 QMTKRARAIGLTQSTFANSTGLPNPDNKMSVRELAKLARHIILTYPEYYPLFGEKEFTWN 226

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             +  N N  +    GADG KTG+T   G+ +V SA+Q    LI V+ G  D + R   +
Sbjct: 227 KIRQTNRNPLLNAMPGADGFKTGYTKEGGYGMVGSAVQNGMRLIVVVNGLDDADDRASEA 286

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQ---QNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             LL  GF N   R          Y          VP    E           +  +   
Sbjct: 287 KKLLEWGFRNFESRSLFANDATIGYARVFGGEKRYVPLTPAEPVRVMVRKNGSDKLIARI 346

Query: 314 KDKESHFIDFEKITLLK 330
             +       E    + 
Sbjct: 347 VYQGPVPAPVESGQRVG 363


>gi|39935841|ref|NP_948117.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris CGA009]
 gi|39649695|emb|CAE28216.1| penicillin binding protein [Rhodopseudomonas palustris CGA009]
          Length = 413

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/317 (25%), Positives = 128/317 (40%), Gaps = 8/317 (2%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                + P   L+D  +G V+ E   D    P+S+ KLMT   VF  LK     LT    
Sbjct: 47  SGFEAQAPSAILVDAESGSVLFEKNADELRAPSSMMKLMTVETVFHLLKTGDLQLTQEYR 106

Query: 82  ISKNAS-----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +S+NA          S    +  S +++DN L   I++S ND  + +AE +  +E  FV+
Sbjct: 107 VSENAWRNGGAPAGGSTMFAEIHSIISVDNLLHGAIIQSGNDSCMVLAEGIAGSEAAFVE 166

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M   ++ +GL+ + F N+ G+    +  + R++A L+  I   +P+Y   F  K     
Sbjct: 167 QMTKRARAIGLTQSTFANSTGLPNPDNKMSVRELAKLARHIILTYPEYYPLFGEKEFTWN 226

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             +  N N  +    GADG KTG+T   G+ +V SA+Q    LI V+ G  D + R   +
Sbjct: 227 KIRQTNRNPLLNAMPGADGFKTGYTKEGGYGMVGSAVQNGMRLIVVVNGLDDADDRASEA 286

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQ---QNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             LL  GF N   R          Y          VP    E           +  +   
Sbjct: 287 KKLLEWGFRNFESRSLFANDATIGYARVFGGEKRYVPLTPAEPVRVMVRKNGSDKLIARI 346

Query: 314 KDKESHFIDFEKITLLK 330
             +       E    + 
Sbjct: 347 VYQGPVPAPVESGQRVG 363


>gi|289578326|ref|YP_003476953.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           italicus Ab9]
 gi|289528039|gb|ADD02391.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           italicus Ab9]
          Length = 382

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 141/349 (40%), Gaps = 23/349 (6%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++F   L I+   M S      S   +       ++D  TG V+ E         AS T
Sbjct: 1   MKKFVFYLFILLYFMSSVKVYANSDYPSIFAKSAIVIDQETGRVLYEKNSHEKLPMASTT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S N
Sbjct: 61  KIMTLLVALEK-----GNLNDIVTVSKRAASVGGSSIWLSPGEKIDMESLLYGLMLNSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSW 175
           D A AIAE +  + + F + MN  +K +G   THF+   G+      HYTTA D+A+++ 
Sbjct: 116 DAATAIAEHIGGSVENFAKIMNEKAKEIGAYDTHFVTPSGLDIGIDDHYTTAYDLALITR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V
Sbjct: 176 Y-AFRYPKFAEIVSTKEKTIPWEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLV 234

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLS 286
           +SA +  +  IAV+L +       + S  +L   F      + +     I K   +    
Sbjct: 235 SSATREGRRFIAVVLNSP---PMWEDSIKILDYAFSKYKPYRVLKREELIKKIEVKGGKE 291

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           N +  +SE  C              E    ES     EK   +     K
Sbjct: 292 NSISVVSEIECIIPASEEEKQKVSLEFHLPESVEAPIEKGERIGYVTVK 340


>gi|320177929|gb|EFW52913.1| D-alanyl-D-alanine carboxypeptidase [Shigella boydii ATCC 9905]
          Length = 388

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FY 281
           FN++AS + G + LIAV++GA     R + +  LL  G  N T  + ++   K      +
Sbjct: 241 FNLIASGVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIW 300

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  N      +E      +    + + K   D +           +   
Sbjct: 301 YGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTVDGKELTAPISAHQRVGEI 351


>gi|325289983|ref|YP_004266164.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965384|gb|ADY56163.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 389

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 4/331 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++ ++   + ++ P ++           L+D ++G V+ E        PAS+TKLMT  
Sbjct: 14  LVIAVSCFFMYDVEPLMAANIETSAGSAILIDASSGKVLYEKDAHKRLAPASVTKLMTLL 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L+  K  L   +T S+ A     S    + G  ++L+  L  + V SAND  VA+
Sbjct: 74  IAAEALESGKVNLKDTVTASERACSMGGSQIYLEVGEKLSLEEMLISIAVGSANDACVAV 133

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  + ++FV  MN  +K LGL  T+F+N +G+   GHYT+A D+AI++         
Sbjct: 134 AEHINGSLEEFVHQMNEKAKKLGLVDTNFINDNGLPAEGHYTSAYDLAIIAKESLKYPLI 193

Query: 184 -YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             +   +   L     K  NTN  +  + G  G+KTG+T  + + + ++  +    LI V
Sbjct: 194 SKLTSIKEYDLRGGKFKLYNTNKLLWWYEGTSGLKTGWTQEAKYCLASTVERNGLKLICV 253

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTT 299
           ++   +       S  L + GF N + +K      K      Q+  + +V  I ++    
Sbjct: 254 VMAVPEVRGHFAESMKLYNYGFANYSYKKFAEAGSKQGETTVQKGTAEKVDLIVDKAVGI 313

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             E         E    ++      K   L 
Sbjct: 314 SIEKGKDKDYRMEISYDQTIHAPVVKGQKLG 344


>gi|238913456|ref|ZP_04657293.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 390

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHNGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQRVGEI 353


>gi|15829924|ref|NP_308697.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. Sakai]
 gi|13360128|dbj|BAB34093.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. Sakai]
          Length = 403

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKDTDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|325577705|ref|ZP_08147980.1| D-alanyl-D-alanine carboxypeptidase DacA [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325160450|gb|EGC72576.1| D-alanyl-D-alanine carboxypeptidase DacA [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 395

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 14/349 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +++ ++   +   S                     Y L+D N+G V+A   PD    PAS
Sbjct: 8   LKKIVLCSGLMAASTFAASEDIQYGIAIPEVNAQTYVLMDYNSGAVLASLNPDQRQYPAS 67

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLI 112
           LTK+MT+YVV + LK+ K      +TIS++A        S         +++ +  K +I
Sbjct: 68  LTKMMTSYVVGAALKQGKIHNEDMVTISESAWGRNFPDSSKMFLNLNQQVSVGDLNKGII 127

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  VA+AE +  T   FV  MN   +  GL  T+F   HG+     Y+TARDMAI
Sbjct: 128 IVSGNDACVAVAEHISGTVANFVDTMNKYVQQFGLKNTNFTTPHGLDDPNQYSTARDMAI 187

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           +   I  D P+    +  K       K PN N       +  DGMKTG T  +G+N+VAS
Sbjct: 188 IGAHIIRDLPEEYKIYAEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVAS 247

Query: 232 AIQ-GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           A    +  LI+V++G      R   S  LL  GF N    K      +      Y  +  
Sbjct: 248 ATSPNNMRLISVVMGVPTYKGREVESKKLLQWGFANFETLKTYKANEEISKQSVYYGDKG 307

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                + ++   T  +    + + +   D +       K  ++   + +
Sbjct: 308 EVKVGVLQDGFITVPKGKQADLKARYELDNKYLQAPLAKGQVVGKIVYQ 356


>gi|254295961|ref|ZP_04963418.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           406e]
 gi|157805850|gb|EDO83020.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia pseudomallei
           406e]
          Length = 437

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 67  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 126

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 127 TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 187 QFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 246

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 247 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 307 ETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITVP 366

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 367 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 397


>gi|91975804|ref|YP_568463.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB5]
 gi|91682260|gb|ABE38562.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB5]
          Length = 492

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 109/311 (35%), Positives = 171/311 (54%), Gaps = 5/311 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + IA  ++    P L+ AE        L++ +TG V+      +PW PAS+TK+MTAYV 
Sbjct: 16  IAIAATLMLMAAPRLASAEAL-----LLIEADTGKVLQAENATYPWYPASVTKIMTAYVT 70

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              +KE +  L + +T+S  A+   PS   F+ G+ +T+DNALK+++VKSAND+AV +AE
Sbjct: 71  LKAVKEGRLTLDSLLTVSPVAAAQSPSKMGFRPGTQITVDNALKMMMVKSANDMAVVLAE 130

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +   F   MN T++ LG++ TH++N +G+   G  T+ARD+ IL+  +  D P+Y 
Sbjct: 131 GVGGSIDGFSATMNATAQRLGMTQTHYVNPNGLPADGQVTSARDLGILARAMIRDLPEYE 190

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
           ++  I  +    +   N N  +G + GADG KTGF CASG+N+VASA +  + LIAV+LG
Sbjct: 191 YFSHIPAIRFGKRVTHNFNKLIGRYPGADGFKTGFICASGYNLVASATRNGRRLIAVVLG 250

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
           A     R   +A LL  GF   T       +        +    PN+ EE+C  +++   
Sbjct: 251 ANSGQDRAVKAAQLLERGFSANTLAWLTPSLGTVDNLAPIDATPPNLREEMCGPKRKRPA 310

Query: 306 YNTQMKEAKDK 316
            +   + A   
Sbjct: 311 SDEDEQVASVI 321


>gi|269965477|ref|ZP_06179596.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 40B]
 gi|269829956|gb|EEZ84186.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 40B]
          Length = 392

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++     +       +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATFAQSALASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +IV+S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVRDLNRGIIVQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  LG++ +HF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWANTLGMTNSHFANVHGLDNAELYSTPYDMALLGKALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPNEYRVYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  D N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKVWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE       K  ++     +
Sbjct: 315 DTYVTLPRGEAKNLKASFVLEKE-LEAPINKGDVVGKLYYQ 354


>gi|323170759|gb|EFZ56409.1| D-alanyl-D-alanine carboxypeptidase dacC [Escherichia coli LT-68]
          Length = 403

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  + P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRNVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|323702413|ref|ZP_08114077.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532552|gb|EGB22427.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 400

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 17/320 (5%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D  TG V+ E         AS TK+MTA +           L +  T+SK+
Sbjct: 59  VSADAAILMDATTGQVLYEKNAHKRRPIASTTKIMTALLAIEC-----GNLKSVATVSKH 113

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+    S+   + G  +TL++ L   ++ S ND  VAIAE +   E+ FV  MN  +  L
Sbjct: 114 AAGTEGSSIYLRAGEKLTLEHLLYGALMHSGNDACVAIAEHIAGKEELFVNLMNYKAYLL 173

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---N 202
           G   THF N +G+    H +TA D+A+++     +                 +      N
Sbjct: 174 GARNTHFANTNGLPHDQHLSTAYDLALITRHALKNPVFKQIVATRTHKIKGPQGLRYLAN 233

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  + ++ GA+G+KTG T A+G  +V+SA +  + LIAV+L A D   R   S  LL  
Sbjct: 234 TNQMLWSYQGANGVKTGTTNAAGKCLVSSATRDGRLLIAVVLHAGD---RYADSIRLLDY 290

Query: 263 GFYNKTDRKKINYIIKD---FYQQNLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDK 316
           GF N T+   +            + +  EVP +++    V    K     +  ++     
Sbjct: 291 GFQNFTNHTVVKKGEVVSTIKVNEGIKAEVPVVADRDLVVTIPVKRTDMIDRLVEIEPVL 350

Query: 317 ESHFIDFEKITLLKNKITKK 336
           ++     +K+  +K K+  +
Sbjct: 351 QAPIKSGQKVGGIKVKVNGQ 370


>gi|167917341|ref|ZP_02504432.1| penicillin-binding protein 6 [Burkholderia pseudomallei BCC215]
          Length = 377

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 6   ATYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 65

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 66  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 125

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 126 AQFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVK 185

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 186 EFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMM 245

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 246 GETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITV 305

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 306 PRGLADKVKPEVALNAPLIAPLADGQVVGSVK 337


>gi|301643955|ref|ZP_07243981.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           146-1]
 gi|301077690|gb|EFK92496.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           146-1]
          Length = 427

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 34  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 93

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 94  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 153

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 154 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 213

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 214 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 273

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 274 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 333

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 334 WFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQIVGTI 385


>gi|262394994|ref|YP_003286848.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. Ex25]
 gi|262338588|gb|ACY52383.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. Ex25]
          Length = 392

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 12/341 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++     +       +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATFAQSALASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +IV+S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPESSKMFIEVGTTVKVRDLNRGIIVQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  +  LG++ +HF N HG+     Y+T  DMA+L   +  
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWANTLGMTNSHFANVHGLDNAELYSTPYDMALLGKALIR 194

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 195 DVPNEYRVYSEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGQMR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE 294
           L+AV++G  D N R   S  LLS GF                 +  +  N       + +
Sbjct: 255 LVAVVMGTKDANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKVWMGNKDTVALGLDQ 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T       N +     +KE       K  ++     +
Sbjct: 315 DTYVTLPRGEAKNLKASFVLEKE-LEAPINKGDVVGKLYYQ 354


>gi|153832244|ref|ZP_01984911.1| penicillin-binding protein 6 [Vibrio harveyi HY01]
 gi|148871555|gb|EDL70410.1| penicillin-binding protein 6 [Vibrio harveyi HY01]
          Length = 388

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 9/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++       +          +   Y L+D  +G +IAE        PASLTKLMTAYVV
Sbjct: 13  LLLQTFSAPALAVVTPNPPQLQAKGYVLMDFQSGAIIAEQNARAGLAPASLTKLMTAYVV 72

Query: 66  FSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            + +K  +      +T+S+NA        S    +    +T+ N ++ +I++S ND  VA
Sbjct: 73  GTEIKAGRLNWDDKVTVSENAWSAKFPDSSKMFIQPKDEITVANLMRGVIIQSGNDACVA 132

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  FV  MN  +  L L+ T+F+N+HG+   G  T+  DMA L   I  D P
Sbjct: 133 LAEHVAGSEGAFVALMNGWADKLSLNDTYFVNSHGLDSEGIQTSPNDMATLMQAIINDVP 192

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +  K  +       N N       +  DG KTG+T  +G+++V+SA QG   LI+
Sbjct: 193 DVYALYSEKVFKWNKITQYNRNKLLWDKSMDVDGGKTGYTSNAGYSLVSSAKQGKMRLIS 252

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVC 297
           V++G   + +R   S +LLS GF     ++             ++ ++S      +++  
Sbjct: 253 VVMGTPSKQSRITQSKNLLSYGFRFYDTKQVAKQGEVQTSAKVWKGDVSEIDLGFAQDAY 312

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            T    +          + E       K  ++   + K
Sbjct: 313 LTLPRSLTAGLDKSVVVN-EPLIAPIAKGDVVGKVVWK 349


>gi|320086495|emb|CBY96266.1| DD-carboxypeptidase, penicillin-binding protein 6B [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
          Length = 390

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 151/349 (43%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDHAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K      +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQRVGEI 353


>gi|167717860|ref|ZP_02401096.1| penicillin-binding protein 6 [Burkholderia pseudomallei DM98]
 gi|167892592|ref|ZP_02479994.1| penicillin-binding protein 6 [Burkholderia pseudomallei 7894]
          Length = 378

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 7   ATYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 66

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 67  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 126

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 127 AQFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVK 186

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 187 EFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMM 246

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 247 GETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITV 306

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 307 PRGLADKVKPEVALNAPLIAPLADGQVVGSVK 338


>gi|260428585|ref|ZP_05782564.1| D-alanyl-D-alanine carboxypeptidase DacC [Citreicella sp. SE45]
 gi|260423077|gb|EEX16328.1| D-alanyl-D-alanine carboxypeptidase DacC [Citreicella sp. SE45]
          Length = 392

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 82/337 (24%), Positives = 141/337 (41%), Gaps = 8/337 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A A    +    + A         +LD  TG V+     D    PAS++KLMT Y+ F
Sbjct: 10  LLAAASTLAVLATQAGAFDTSARAAFVLDYTTGTVLMAKNADEAMPPASMSKLMTLYMAF 69

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             + + +  L   + +S++A  Y  S         + +++ L+ +IV S ND    IAE+
Sbjct: 70  EAIHDGRLTLDERLPVSEHAMSYGGSTMFLNTQDRVRVEDLLRGIIVLSGNDACAVIAEA 129

Query: 127 LCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           L     E  F + M   ++ LG++ + F NA G     H  + RD+ +L+ RI  DFP++
Sbjct: 130 LSPNGTEPGFAELMTRRAQQLGMTNSTFANASGWPAANHRMSMRDLTLLATRIIEDFPEF 189

Query: 185 MHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              F  K             N N  +   +GADG+KTG T  +G+ +V SA QG++ ++ 
Sbjct: 190 YPIFAEKQFAFDGRAPSNVNNRNPLLRLNIGADGLKTGHTAEAGYGLVGSAKQGERRVVF 249

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCT 298
            + G      R + S S+++  F    +R  +               +  V  ++E+  T
Sbjct: 250 AMTGLDSERARAEESESIVNWAFRQFAERTLVKKGTAVAQADVWMGSAESVGLVAEDDIT 309

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +    T   E            +   L   I +
Sbjct: 310 LLVPVTPGTTLEAEVVYTGPLKAPIAQGQQLAELIIR 346


>gi|91786161|ref|YP_547113.1| penicillin-binding protein 6 [Polaromonas sp. JS666]
 gi|91695386|gb|ABE42215.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Polaromonas sp. JS666]
          Length = 400

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 20/341 (5%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                   A       Y LLD     ++A    D P  PASLTKLMT Y+VF  LK KK 
Sbjct: 26  VAHAQAPQAPEIAARSYLLLDVTANQILAAKDIDSPVEPASLTKLMTEYLVFDALKSKKI 85

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L     +S+ A + P S         + +++ +K ++V+S ND  +A+AE +  T + F
Sbjct: 86  DLKQTFGVSERAWKMPGSRMFIDPKMQVPVEDLIKGMVVQSGNDATMALAEGVGGTAEHF 145

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V+ MN  +K LG+ +T + N  G+ + GH TTARD++IL+ R+  DFP Y+ Y  IK   
Sbjct: 146 VRLMNEQAKALGMKSTAYKNPEGLTEPGHTTTARDLSILATRLMRDFPDYIGYSAIKKYR 205

Query: 195 IKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----------DQSLI 240
             G       N N  +      DG+KTG T A+G+ ++A+A +             + L+
Sbjct: 206 YPGTPAANDTNRNTLLFRDPTVDGLKTGHTEAAGYCMIATARRDFPNLGVGGAPGGRRLL 265

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEE-- 295
           A++LG    + R   S  LL+ G+      K  +     +     +  ++ V     E  
Sbjct: 266 AIVLGTSSDSARANESQKLLNWGYTAFEAVKLFDAGQPVVAPSVWKGAASTVKLGRPEAI 325

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            V           TQ+       + F+  +++  LK  + +
Sbjct: 326 VVAVAAGSAPKVKTQVARPDPLVAPFVKGQQLGTLKVMLGE 366


>gi|167736880|ref|ZP_02409654.1| penicillin-binding protein 6 [Burkholderia pseudomallei 14]
          Length = 376

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 5   ATYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 64

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 65  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 124

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 125 AQFVNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVK 184

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 185 EFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMM 244

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 245 GETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITV 304

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 305 PRGLADKVKPEVALNAPLIAPLADGQVVGSVK 336


>gi|166030455|ref|ZP_02233284.1| hypothetical protein DORFOR_00116 [Dorea formicigenerans ATCC
           27755]
 gi|166029813|gb|EDR48570.1| hypothetical protein DORFOR_00116 [Dorea formicigenerans ATCC
           27755]
          Length = 426

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 94/321 (29%), Positives = 144/321 (44%), Gaps = 11/321 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++ +TG VI E   D    PAS+TK+MT  ++F  L+E K  L   +T S+
Sbjct: 70  DISAPSALLMEASTGQVIYEKDADSKRPPASVTKVMTLLLIFDALQEGKIHLEDEVTTSE 129

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G   T++  +K + V SAND  V +AE +C  E++FV  MN  +K 
Sbjct: 130 YAASMGGSQVFLEPGEVQTVETLIKCISVASANDACVCMAEYICGNEQEFVNQMNERAKG 189

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           LG+  THF+N +G+   GH TTARD+A++S  +   +PQ   Y  I   +I         
Sbjct: 190 LGMENTHFVNCNGLDAEGHVTTARDIALMSRELIHTYPQIFDYCNIWMEDITHTTKKGST 249

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  +  +  A G+KTG T  + F I A+A + +  +IAVI+ A D   R + +
Sbjct: 250 QFGLTNTNKMIRQYEYATGLKTGSTSQAKFCISATARKDNTDMIAVIMAADDSKARMRDA 309

Query: 257 ASLLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            +LL+ GF       +                        E          + +T  K  
Sbjct: 310 ITLLNYGFGKCQKYQEDTVKKIQDVPVKHGVEKKVGAAQMELFSYVDVTGADLSTIKKIV 369

Query: 314 KDKESHFIDFEKITLLKNKIT 334
           K KE+      +   +   I 
Sbjct: 370 KLKENATAPVRQGDKIGEVIY 390


>gi|17942531|pdb|1HD8|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of
           Penicillin-Binding Protein 5 At 2.3 A Resolution
 gi|28374028|pdb|1NJ4|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of
           Penicillin-Binding Protein 5 At 1.9 A Resolution
 gi|61679891|pdb|1SDN|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of
           Penicillin-Binding Protein 5 Modified By Mercury
          Length = 363

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 3   LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGK 62

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +TI  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 63  FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRDINLQSGNDACVAMADFA 122

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 123 AGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSI 182

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 183 YKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 242

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 243 RTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPR 302

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 303 GRMKDLKASYVLNSSELHAPLQKNQVVGTI 332


>gi|188534483|ref|YP_001908280.1| D-alanyl-D-alanine carboxypeptidase fraction A [Erwinia
           tasmaniensis Et1/99]
 gi|188029525|emb|CAO97402.1| Penicillin-binding protein 5 [Erwinia tasmaniensis Et1/99]
          Length = 404

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/345 (25%), Positives = 145/345 (42%), Gaps = 19/345 (5%)

Query: 7   IIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +IA+++    +         +          Y L+D N+G V+AE   D   +PASLTK+
Sbjct: 18  LIALSLNVVAYADDVNIKTMIPGVPEIDAEAYVLIDYNSGKVLAEKNADARRDPASLTKM 77

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIV 113
           MT+YV+   +K  K      +T+ K+A                K G  + +    + +++
Sbjct: 78  MTSYVIGQAIKAGKIHQDDIVTVGKDAWATGNPVFKGSSLMFLKPGDRVPVSQLTRGIVL 137

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y++ARDMA++
Sbjct: 138 QSGNDACVAMADYVAGSQDTFVGLMNNYVKALGLQNTHFQTVHGLDAEGQYSSARDMALI 197

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
              +  D P     +  K       +  N N     T L  DG+KTG T ++G+N+VASA
Sbjct: 198 GRALIRDVPDEYAVYHEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTESAGYNLVASA 257

Query: 233 IQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSN 287
            +G    LI+ ++G      R   S  LL+ GF        +        +  +  N   
Sbjct: 258 TEGQQMRLISAVMGGHTYKGRETESKKLLTWGFRFFETVAPLKAGKEFASEPVWFGNSDR 317

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               +  +V  T       + +              +K  ++   
Sbjct: 318 VQLGVENDVYLTIPRGRMKDLKASYTLSNTELHAPLQKNQVVGTI 362


>gi|317491121|ref|ZP_07949557.1| D-alanyl-D-alanine carboxypeptidase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920668|gb|EFV41991.1| D-alanyl-D-alanine carboxypeptidase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 403

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 20/352 (5%)

Query: 1   MRQFLV--IIAMAML-------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++  +  ++A+ M+        N+   +          Y L+D N+G V+AE+  D   
Sbjct: 10  IKRIALSSLLAIGMVNVVHADDVNLKTMIPGVPQIDAEAYILIDYNSGKVLAESNADARR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           NPASLTK+MT+YV+   +K  K      +T+ ++A                K G  + + 
Sbjct: 70  NPASLTKMMTSYVIGQAMKAGKFTENDVVTVGQDAWATGNPVFKGSSLMFLKPGDRVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+ +  ++  FV  MNN  K LGL  THF   HG+   G Y+
Sbjct: 130 LLIRGINLQSGNDACVAMADYVAGSQDAFVGLMNNYVKALGLQNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K       +  N N     T +  DG+KTG T ++
Sbjct: 190 SARDMALIGQALIRDVPNEYAIYKEKEFTFNNIRQMNRNGLLWDTSMNVDGIKTGHTESA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDF 280
           GFN+VASA +G   LI+ +LG      R   S  LL+ GF        +        +  
Sbjct: 250 GFNLVASATEGQMRLISAVLGGHTSKGRESESKKLLTWGFRFFETVSPLKAGREFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +         K  ++   
Sbjct: 310 WFGDTDRAQLGVDKDVYLTIPRGRMKDLKASYTLNSTELDAPLAKNQVVGTI 361


>gi|167909308|ref|ZP_02496399.1| penicillin-binding protein 6 [Burkholderia pseudomallei 112]
          Length = 379

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 8   ATYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 67

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 68  ITMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 127

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 128 AQFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVK 187

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 188 EFTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMM 247

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +L+ G+      +             Y+   +N    + ++  +  
Sbjct: 248 GETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITV 307

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 308 PRGLADKVKPEVALNAPLIAPLADGQVVGSVK 339


>gi|53724944|ref|YP_101907.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 23344]
 gi|52428367|gb|AAU48960.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 23344]
          Length = 403

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 33  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 92

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 93  TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+ +THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 153 QFVNMMNAEAQRLGMKSTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 212

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 213 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 272

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 273 ETKESDRVQDSMKMLNYGYTAFDSVRLYKAGQPIGTPRVYKGKSNNVQVGVKKDQFITVP 332

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 333 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 363


>gi|22126741|ref|NP_670164.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6
           [Yersinia pestis KIM 10]
 gi|45441099|ref|NP_992638.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|149366701|ref|ZP_01888735.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis CA88-4125]
 gi|218928470|ref|YP_002346345.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis CO92]
 gi|21959762|gb|AAM86415.1|AE013888_11 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6
           [Yersinia pestis KIM 10]
 gi|45435958|gb|AAS61515.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|115347081|emb|CAL19973.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis CO92]
 gi|149291075|gb|EDM41150.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis CA88-4125]
          Length = 432

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 64  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 123

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 124 TVGKDAWATGNPALRGSSLMFLKPGDRVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 183

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 184 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 243

Query: 195 IKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +  N N  +       DGMKTG+T  +G+N+VASA  G   LI+V+LGA     R 
Sbjct: 244 FNKIRQTNRNRLLWNSSLNVDGMKTGYTNGAGYNLVASATDGPMRLISVVLGAPSDKVRF 303

Query: 254 KVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF        I        +  +  + S     ++E+   T  +    N +
Sbjct: 304 SESEKLLTWGFRFYETVVPIKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLK 363

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                ++        K  ++   
Sbjct: 364 ASYTLNQTELRAPLAKHQVVGTI 386


>gi|42543137|pdb|1NZO|A Chain A, The Crystal Structure Of Wild Type Penicillin-Binding
           Protein 5 From E. Coli
 gi|46014978|pdb|1NZU|A Chain A, Wild-Type Penicillin-Binding Protein 5 From E. Coli
           Modified By Beta-Mercaptoethanol
 gi|71042191|pdb|1Z6F|A Chain A, Crystal Structure Of Penicillin-Binding Protein 5 From E.
           Coli In Complex With A Boronic Acid Inhibitor
 gi|197305030|pdb|3BEB|A Chain A, Crystal Structure Of E. Coli Penicillin-Binding Protein 5
           In Complex With A Peptide-Mimetic Penicillin
 gi|197305031|pdb|3BEC|A Chain A, Crystal Structure Of E. Coli Penicillin-Binding Protein 5
           In Complex With A Peptide-Mimetic Cephalosporin
 gi|326327867|pdb|3MZD|A Chain A, Structure Of Penicillin-Binding Protein 5 From E. Coli:
           Cloxacillin Acyl-Enzyme Complex
 gi|326327868|pdb|3MZE|A Chain A, Structure Of Penicillin-Binding Protein 5 From E.Coli:
           Cefoxitin Acyl- Enzyme Complex
 gi|326327869|pdb|3MZF|A Chain A, Structure Of Penicillin-Binding Protein 5 From E. Coli:
           Imipenem Acyl- Enzyme Complex
          Length = 363

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 3   LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGK 62

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +TI  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 63  FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 122

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 123 AGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSI 182

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 183 YKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 242

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 243 RTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPR 302

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 303 GRMKDLKASYVLNSSELHAPLQKNQVVGTI 332


>gi|316935787|ref|YP_004110769.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris DX-1]
 gi|315603501|gb|ADU46036.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris DX-1]
          Length = 483

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 164/319 (51%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +        + + +     +          L++ +TG V+  +   +PW+PASLTKLMT 
Sbjct: 9   RLSSSFLAIVAAALLSLTVLPRAASAEALLLIEADTGKVLQADNATYPWHPASLTKLMTM 68

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YV    +K+ +    + +T+S  A+   PS   F  G+ +T+DNALK+++VKSAND+AV 
Sbjct: 69  YVTLQAVKQGRLTQDSLLTVSPIAAAQSPSKMGFGPGTQITVDNALKMMMVKSANDMAVV 128

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +   F   MN+T+  LG++ T ++N +G+      T+ARD AIL+  +  D P
Sbjct: 129 LAEGVGGSVDGFSAMMNDTAARLGMTQTRYVNPNGLPADEQVTSARDQAILARAVIRDLP 188

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y +Y  I  +    +   N N  +G + GADG KTGF CASG+N+VASA +  + LIAV
Sbjct: 189 EYEYYVHIPAIRFGKRVTRNFNKLIGRYPGADGFKTGFICASGYNLVASATRNGRRLIAV 248

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           +LGA     R   +A LL  GF   T       +        ++   P++ +E+C  +++
Sbjct: 249 VLGANSGQDRAVKAAQLLERGFSTNTLAWLTPSLGTVDNLAPIAATPPDLRDEMCGPKRK 308

Query: 303 IINYNTQMKEAKDKESHFI 321
               +     A       +
Sbjct: 309 RPASDEDETVANALSGDAV 327


>gi|260438046|ref|ZP_05791862.1| serine-type D-Ala-D-Ala carboxypeptidase [Butyrivibrio crossotus
           DSM 2876]
 gi|292809525|gb|EFF68730.1| serine-type D-Ala-D-Ala carboxypeptidase [Butyrivibrio crossotus
           DSM 2876]
          Length = 385

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 14/349 (4%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++   F++   + + S      +   +       L++ +TG +I E+ PD    PAS+T
Sbjct: 1   MKKVFSFIISFILILSSAHISVTADELSLTSKSAILMEASTGKIIYEHNPDEILRPASIT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  ++F  + + +  +   +T+S++A+    S    + G T T++  +K + + SAN
Sbjct: 61  KIMTLILIFDAIHDGRIKMDDTVTVSEHAASMGGSQVFLEAGETQTVETLIKCIAIASAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+AE +  +E+ FV HMN  +K L ++ T+F+N  G+    H TTARD+A++S  +
Sbjct: 121 DACVAMAEYIDTSEENFVAHMNERAKGLSMTNTNFVNCCGLDADNHVTTARDVALMSKEL 180

Query: 178 KTDFPQYMHYFQIKGLEIKG--------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
              +P+  +   I    I              NTN  +  +  A G+KTG T  +GF + 
Sbjct: 181 INKYPEIHNISTIWMDTITHVTRRGESDFTLTNTNKLIKQYEWATGLKTGSTSLAGFCLS 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN--YIIKDFYQQNLSN 287
           A+A + D  LI+V++ + D  +R   S  LL+ G+      K  N   I        +  
Sbjct: 241 ATAKRNDIELISVVMASKDGKSRVADSIKLLNYGYSLCQMYKDSNMPNIPSPGISGGMIK 300

Query: 288 EVP-NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           E+    S+       E  +     K+ +  +      ++  ++     K
Sbjct: 301 ELDCEYSDNFSYLFTEKYDEALITKDFEFIDGLKAPVKEGDVVGQLCYK 349


>gi|281600032|gb|ADA73016.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Shigella flexneri
           2002017]
          Length = 427

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 34  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 93

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 94  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 153

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 154 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 213

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 214 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 273

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 274 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 333

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 334 WFSDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 385


>gi|307130041|ref|YP_003882057.1| D-alanyl-D-alanine carboxypeptidase [Dickeya dadantii 3937]
 gi|306527570|gb|ADM97500.1| D-alanyl-D-alanine carboxypeptidase [Dickeya dadantii 3937]
          Length = 403

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 150/351 (42%), Gaps = 20/351 (5%)

Query: 2   RQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++  +   +A+ ++ F +         +          Y L+D N+G V+AE   D   N
Sbjct: 11  KRIALGTLLAISASTFAYADDINLKTMIPAVPDIDAEAYILIDYNSGKVLAEKNADARRN 70

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS------EYPPSNSTFKKGSTMTLDN 106
           PASLTK+MT+YV+   +K  K      +TI K+A           S    K G  + +  
Sbjct: 71  PASLTKMMTSYVIGQAIKSGKISPNDVVTIGKDAWATGNPDFQGSSLMFLKPGDRVPVYL 130

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             K +I++S ND  VA+A+ +  ++  FV  MN   K LGL  T+F   HG+   G Y++
Sbjct: 131 LNKGIILQSGNDACVAMADYVAGSQDSFVNLMNGYVKALGLQNTNFKTVHGLDADGQYSS 190

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           ARDMA++   +  D P     ++ K       +  N N     + L  DG+KTG T ++G
Sbjct: 191 ARDMALIGQALIRDVPDEYATYKEKEFTFNNIRQMNRNGLLWDSSLAVDGIKTGHTASAG 250

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  +
Sbjct: 251 YNLVASATEGQMRLISAVMGGRTFKGRETESKKLLTWGFRFFETVAPLKTGKEFASEPVW 310

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +       + ++V  T       + +               K  ++ + 
Sbjct: 311 FGDNDRVSLGVDKDVYITIPRGRMKDLKASYVLTNTELHAPLAKNQVVGSI 361


>gi|330818433|ref|YP_004362138.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           gladioli BSR3]
 gi|327370826|gb|AEA62182.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           gladioli BSR3]
          Length = 434

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/330 (26%), Positives = 152/330 (46%), Gaps = 15/330 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 65  TYMPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALSTKKI 124

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 125 SMEQIVTPSEAVRRVGTDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSES 184

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+S THF + +G+    HYTTA D+A LS R+  DFP Y + F +K 
Sbjct: 185 QFVNMMNAEAQKLGMSGTHFADVNGMPDPQHYTTAGDLAKLSARLIRDFPDYYNIFSVKE 244

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 + PN N  +      DG+KTG T A+G+ ++ASA +       G + L++V++G
Sbjct: 245 FSYNNIRQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRALPGADGGTRRLVSVMMG 304

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   ++    + ++  V   
Sbjct: 305 ETKESDRVQDSMKMLNYGYSAFDAVRLYKGGQAVETPRVYKGKANSVQVGVQKDQFVTLP 364

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +        Q+       +   + +++  +
Sbjct: 365 KGVGDKLKPQVTLNTPLIAPLAEGQQVGTV 394


>gi|121592706|ref|YP_984602.1| penicillin-binding protein 6 [Acidovorax sp. JS42]
 gi|120604786|gb|ABM40526.1| penicillin-binding protein 6 [Acidovorax sp. JS42]
          Length = 387

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 17/352 (4%)

Query: 1   MRQFLVII------AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M+  L  +      A+   + ++  +          Y L+D   G V+A    D P   A
Sbjct: 1   MKSLLSSLRTLACAALMAPAILWAQVPQPPEIAARNYMLVDVTAGQVLATKDIDAPVEQA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMT Y+VF  L+ KK  L   + +S+ A + P S         + +D+ LK +IV+
Sbjct: 61  SLTKLMTGYLVFDALRAKKITLEQRLPVSERAWKMPGSRMFIDPKMQVPVDDLLKGMIVQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  VA+AE +  T + FV+ MN  +K LG++ T + N  G+ + GH TTARD+A L+
Sbjct: 121 SGNDATVALAEGVGGTVENFVRLMNEQAKALGMTNTAYKNPEGLTEPGHTTTARDLATLA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            R+  DFP+YMHY+  K    +G       N N  +      DG+KTG T A+G+ +VA+
Sbjct: 181 TRLMQDFPEYMHYYSTKQYRYEGTPASNSNNRNMLLFRDPSVDGLKTGHTAAAGYCLVAT 240

Query: 232 AIQ-----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQ 283
           + +     G + L++++LGA   N R   S  LL+ G+      K  +           +
Sbjct: 241 SKREFPNVGQRRLLSIVLGAASENARANESQKLLNWGYTAFDSVKLFDAGQAAATPAVWK 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              + +     E         +      E   K+     F K   +     K
Sbjct: 301 GTQSTLKIGRPEAIVITVPSGSAGKVTTEIVRKDPLVAPFTKGQAIGTLKVK 352


>gi|198246188|ref|YP_002216147.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197940704|gb|ACH78037.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|326623893|gb|EGE30238.1| D-alanyl-D-alanine carboxypeptidase DacD [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
          Length = 390

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/349 (24%), Positives = 150/349 (42%), Gaps = 21/349 (6%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQ 283
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + +        +  +  
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSSKKVGSERIWYG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEKITLL 329
           +         ++      +    + + K     K+ E+     +++  +
Sbjct: 305 DKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQRVGEI 353


>gi|254247085|ref|ZP_04940406.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia cenocepacia
           PC184]
 gi|124871861|gb|EAY63577.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia cenocepacia
           PC184]
          Length = 436

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 14/342 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                +   P            + L+D  +  V+A    D    PASLTKLMTAY+VF  
Sbjct: 61  FTGAPATYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA 120

Query: 69  LKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           L +KK  +   +T S          S    +    +++ + +  +I++S ND A+A+AE 
Sbjct: 121 LDKKKISMEQIVTPSDAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL 180

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E +FV  MN+ +  LG+  THF + +G+    HYTTA D+A LS  +  DFPQY  
Sbjct: 181 VGGSEGQFVTMMNDEAGRLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYS 240

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLI 240
            F  K  +    +  N N  +      DG+KTG T A+G+ ++ASA +      G + L+
Sbjct: 241 IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV 300

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE- 295
           +V++G    + R + S  +L+ G+      +             Y+   +     +  + 
Sbjct: 301 SVMMGEQKESERTQDSMKMLNYGYSAFDSVRLFKGGQAISTPRIYKGKDNTVQVGVKGDQ 360

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +       T++       +   + +++  +K     K
Sbjct: 361 WATVPRGLGDKVKTEVDVNAPLIAPLTEGQQVGTVKIVADGK 402


>gi|163814026|ref|ZP_02205418.1| hypothetical protein COPEUT_00178 [Coprococcus eutactus ATCC 27759]
 gi|158450475|gb|EDP27470.1| hypothetical protein COPEUT_00178 [Coprococcus eutactus ATCC 27759]
          Length = 417

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 140/319 (43%), Gaps = 11/319 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K P   L++  +G VI E   D    PAS+TK+MT  + F  + + K  L   + +S 
Sbjct: 61  DIKSPSAILMEAESGQVIYEKNCDTAMAPASVTKVMTLLLTFEAIDDGKFSLDDTVVVSD 120

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S   F+ G   T+ + +K +I+ S ND AVA+AE +  +E  FV  MN  +K 
Sbjct: 121 HAASMGGSQCFFESGEEQTVQDMIKCIIIASGNDAAVAMAEKIAGSEPAFVNMMNERAKE 180

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           LG+    F NA G+   GH  +ARD+A++S  + T   +   Y  I    I  K      
Sbjct: 181 LGMENASFKNACGLDTSGHEMSARDIALMSRELITKHSEIFDYSGIWMDHITHKTARGDS 240

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  +  + GA G+KTG+T  + + + A+A +    LIAVI+G   +  RN  +
Sbjct: 241 RFDLVNTNKFLNMYTGATGLKTGYTSTAKYCMSATAERDGIDLIAVIMGGETKEMRNNDA 300

Query: 257 ASLLSMGFY---NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             LL  G+      TD++ I        +            +         N ++  K+ 
Sbjct: 301 CHLLDYGYSKCHKYTDKEIIKEKKLSVDKGTSDYVTIKTIPQFEAILLGSENADSVSKKI 360

Query: 314 KDKESHFIDFEKITLLKNK 332
              E      +K   L   
Sbjct: 361 DIPEKITAPVKKGDELGEV 379


>gi|332971504|gb|EGK10454.1| serine-type D-Ala-D-Ala carboxypeptidase [Kingella kingae ATCC
           23330]
          Length = 432

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 88/356 (24%), Positives = 153/356 (42%), Gaps = 28/356 (7%)

Query: 1   MRQFLVIIAMAMLS-------------NIFPFLSIA------ETNKLPYYTLLDTNTGHV 41
           M++ L I+    L                     +          K   Y + D  +G +
Sbjct: 36  MKKILSILICTTLLHTPVWANTASEPNVQAASAPVPLSSIQLPEIKAVAYLVQDLQSGQI 95

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +A+   D    PASLTK+MTAY+VF  L+ KK         S++A     S    + G  
Sbjct: 96  LAQANADQKIEPASLTKVMTAYLVFQALENKKITPDQTTKTSEHAWRQAGSRMFLELGKP 155

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +++ + +  L+V+ AND AV++AE L  +E +FV  MN  +K LG++ THF NA G+   
Sbjct: 156 VSVQDLVHGLVVQLANDAAVSLAELLAGSEAEFVALMNAEAKRLGMTNTHFDNATGLSSQ 215

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
            H TT +D+AILS  +  DFPQY   +  K          N N  +      DG+  G+T
Sbjct: 216 THLTTVKDLAILSNALIRDFPQYYKIYSTKSFTYNTITQQNRNLLLFRDDNIDGLAAGYT 275

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
            + G+N++AS+ +  + +++++ GA    +R   S+ LL+    N   +       +   
Sbjct: 276 NSGGYNLIASSKRDGRRVLSIVAGAASAESRATESSKLLNYALLNFDTQPMFQAGKEVST 335

Query: 282 QQNLSNEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
            +       +++        V   + +  N  + +   +         +K  +L  
Sbjct: 336 VKIFKGAQNSVAIGFGQDAYVTVPRNQQTNIKSFIDTNQ---PVLAPIKKGQVLGT 388


>gi|187927291|ref|YP_001897778.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ralstonia pickettii 12J]
 gi|309780010|ref|ZP_07674763.1| serine-type D-Ala-D-Ala carboxypeptidase [Ralstonia sp. 5_7_47FAA]
 gi|187724181|gb|ACD25346.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ralstonia pickettii 12J]
 gi|308921180|gb|EFP66824.1| serine-type D-Ala-D-Ala carboxypeptidase [Ralstonia sp. 5_7_47FAA]
          Length = 400

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 15/330 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  A       + L D  +G V+     D    PASLTKLMTAY+VF  +++ K  
Sbjct: 32  AMAQPVPAPQVAARSWMLTDVTSGQVLGGANMDERIEPASLTKLMTAYLVFEAVRDGKLK 91

Query: 76  LTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
               IT ++     +   S    + G   ++    + LI++S ND A+ +AE++  TE  
Sbjct: 92  YDQMITPTETVRTVKTDESRMFLEAGKPASVREMTQGLIIQSGNDAALVLAEAVGGTETN 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  ++ LG+  THF NA G+    HY+TARD++IL+  +  DFPQ   ++  K  
Sbjct: 152 FVMLMNREAERLGMKNTHFANAAGLPDPNHYSTARDLSILTAALIKDFPQDYKFYSQKEF 211

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGA 246
                K  N N  +      DG KTG T ++G+ +V SA +        ++ L++VI+G 
Sbjct: 212 TYNNIKQSNRNRLLWLDPTVDGGKTGHTKSAGYCLVTSANRPLPDVPGANRRLLSVIIGT 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE--VCTTQ 300
                R + S  +L+ G+      +           D Y+    +    ++E+  +   +
Sbjct: 272 KSDAIRTQESLKVLNYGYQFFDTVRLYKAKEALQTPDVYKGQAKSVKLGVAEDKWITVPK 331

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    ++      +     +++  +K
Sbjct: 332 GAGARLKPVLERKDPLIAPIAQGQQLGTVK 361


>gi|110680629|ref|YP_683636.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter denitrificans OCh
           114]
 gi|109456745|gb|ABG32950.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter denitrificans OCh
           114]
          Length = 389

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 14/342 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
             I+  A +       + A   +     ++D  TG V+     D P  PAS++KLMT Y+
Sbjct: 2   FRILLAAFVLVASTLTAAAFETRASAAFVMDQTTGTVLLNKNADAPLPPASMSKLMTLYM 61

Query: 65  VFSFLKEKK----AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
            F  ++  K      L   + +S++A  Y  S+   + G T+++++ L+ +IV S ND  
Sbjct: 62  AFEAVRRGKADGGLDLNERLPVSEHAQSYGGSSMFLRSGETVSVEDLLRGIIVVSGNDAC 121

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           V IAE+L     E  F + M   ++ LG++ + F+NA G  Q GH  + RD+AIL+ R+ 
Sbjct: 122 VVIAEALSPDGTEYGFARMMTQRAQQLGMNNSVFINASGWPQTGHVMSMRDLAILADRLI 181

Query: 179 TDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           TDFP++   F         +      N N  +   +GADG+KTG T  +G+ +V SA QG
Sbjct: 182 TDFPEFYPMFAETEFPFDNRVPSNSRNRNPVLTMGIGADGLKTGHTQEAGYGLVGSAKQG 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPN 291
           D+ +I VI G      R + S ++++  F     R       +    D +  +       
Sbjct: 242 DRRIIFVITGLETTAARAQESQAIVNWAFRQFAMRDIGKAGQEFAKADVWMGSSPQVGLV 301

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            +E++      +     + +             K   L   +
Sbjct: 302 AAEDMSVLMPALAEREIEAEVVFT-GPIEAPIAKGDPLGELV 342


>gi|222109487|ref|YP_002551751.1| serine-type d-ala-d-ala carboxypeptidase [Acidovorax ebreus TPSY]
 gi|221728931|gb|ACM31751.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidovorax ebreus TPSY]
          Length = 387

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 17/352 (4%)

Query: 1   MRQFLVII------AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M+  L  +      A+   + ++  +          Y L+D   G V+A    D P   A
Sbjct: 1   MKSLLSSLRTFACAALMAPAILWAQVPQPPEIAARNYMLVDVTAGQVLATKDIDAPVEQA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMT Y+VF  L+ KK  L   + +S+ A + P S         + +D+ LK +IV+
Sbjct: 61  SLTKLMTGYLVFDALRAKKITLEQRLPVSERAWKMPGSRMFIDPKMQVPVDDLLKGMIVQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  VA+AE +  T + FV+ MN  +K LG++ T + N  G+ + GH TTARD+A L+
Sbjct: 121 SGNDATVALAEGVGGTVENFVRLMNEQAKALGMTNTAYKNPEGLTEPGHTTTARDLATLA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            R+  DFP+YMHY+  K    +G       N N  +      DG+KTG T A+G+ +VA+
Sbjct: 181 TRLMQDFPEYMHYYSTKQYRYEGTPASNSNNRNMLLFRDPSVDGLKTGHTAAAGYCLVAT 240

Query: 232 AIQ-----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQ 283
           + +     G + L++++LGA   N R   S  LL+ G+      K  +           +
Sbjct: 241 SKREFPNVGQRRLLSIVLGAASENARANESQKLLNWGYTAFDSVKLFDAGQAAATPAVWK 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              + +     E         +      E   K+     F K   +     K
Sbjct: 301 GTQSTLKIGRPEAIVITVPSGSAGKVTTEIVRKDPLVAPFTKGQAIGTLKVK 352


>gi|83941609|ref|ZP_00954071.1| D-alanyl-D-alanine carboxypeptidase family protein [Sulfitobacter
           sp. EE-36]
 gi|83847429|gb|EAP85304.1| D-alanyl-D-alanine carboxypeptidase family protein [Sulfitobacter
           sp. EE-36]
          Length = 502

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 6/333 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L I+A   +  I P  ++A         ++D  TG V+     D   +PASLTK+MT Y+
Sbjct: 13  LFILAAIWILLILPLSAMAAP---YAAYVIDARTGEVLHSRNADTRLHPASLTKMMTLYI 69

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  +K  +  L + + I+ +A+  PPS    K G T+ L   ++   VKSAND A AI 
Sbjct: 70  AFEAIKRGEISLDSKVKITSHAASEPPSKLGLKSGQTIALRYLIRAAAVKSANDAATAIG 129

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E KF + MN T+K LG++ T F NAHG+ + GH +TA DM I+   +  D P+Y
Sbjct: 130 EAIEGSEAKFARRMNRTAKALGMTNTTFKNAHGLTESGHMSTAHDMTIMGRHLLYDHPEY 189

Query: 185 MHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F     +   +K  +TN     ++ GADG+KTG+T A+GFN+ ASA +G++ +I  +
Sbjct: 190 YNLFSRITADAGVRKVSHTNRRFLSSYKGADGIKTGYTRAAGFNLTASAERGNERIIVTV 249

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY--QQNLSNEVPNISEEVCTTQK 301
            G    + RN   A L+ +GF        +    K  Y   ++        + +V     
Sbjct: 250 FGGTSTSARNAKVAELMDLGFRRAPSSAPLKKPSKPAYADVEDTPVASDGAAGKVIRLVG 309

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +            +    +   ++    + I 
Sbjct: 310 AVTTSKRPTLRPGHQPQVVVATAEVPQATSPIL 342


>gi|241661811|ref|YP_002980171.1| serine-type D-Ala-D-Ala carboxypeptidase [Ralstonia pickettii 12D]
 gi|240863838|gb|ACS61499.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ralstonia pickettii 12D]
          Length = 400

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 15/330 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  A       + L D  +G V+     D    PASLTKLMTAY+VF  +++ K  
Sbjct: 32  AMAQPVPAPQVAARSWMLTDVTSGQVLGGANMDERIEPASLTKLMTAYLVFEAVRDGKLK 91

Query: 76  LTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
               IT ++     +   S    + G   ++    + LI++S ND A+ +AE++  TE  
Sbjct: 92  YDQMITPTETVRTVKTDESRMFLEAGKPASVREMTQGLIIQSGNDAALVLAEAVGGTETN 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  ++ LG+  THF NA G+    HY+TARD++IL+  +  DFPQ   ++  K  
Sbjct: 152 FVMLMNREAERLGMKNTHFANAAGLPDPNHYSTARDLSILTAALIKDFPQDYKFYSQKEF 211

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGA 246
                K  N N  +      DG KTG T ++G+ +V SA +        ++ L++VI+G 
Sbjct: 212 TYNNIKQSNRNRLLWLDPTVDGGKTGHTKSAGYCLVTSANRPLPDVPGANRRLLSVIIGT 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE--VCTTQ 300
                R + S  +L+ G+      +           D Y+    +    ++E+  +   +
Sbjct: 272 KSDAIRTQESLKVLNYGYQFFDTVRLYQAKEALQTPDVYKGQAKSVKLGVAEDKWITVPK 331

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    ++      +     +++  +K
Sbjct: 332 GAGARLKPVLERKDPLIAPIAQGQQLGTVK 361


>gi|225023258|ref|ZP_03712450.1| hypothetical protein EIKCOROL_00110 [Eikenella corrodens ATCC
           23834]
 gi|224943903|gb|EEG25112.1| hypothetical protein EIKCOROL_00110 [Eikenella corrodens ATCC
           23834]
          Length = 414

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 143/313 (45%), Gaps = 5/313 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              K   Y + D  +G ++A +  +    PASLTKLMTAY+VF  L+E K       T+S
Sbjct: 58  PEIKASAYAVYDAQSGQMLASHKLNEHIEPASLTKLMTAYLVFKALEEGKLKPDQTFTVS 117

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +   +   S       +   +D+ LK +IV+S ND ++ +AE++  +E +FVQ MN  +K
Sbjct: 118 EQGWKAEGSRMFLDPKTPARVDDLLKGVIVQSGNDASITLAEAVAGSEAQFVQLMNAEAK 177

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            LG++ THF N+ G+    HYT+ +D+  LS  I  D+PQY   + I+         PN 
Sbjct: 178 RLGMNDTHFENSTGLPGAQHYTSVQDLITLSAAIIHDYPQYYPLYAIQSYSYNNITQPNR 237

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +      DGMKTG T ++G+N+VAS+ +  + +I+V++G      R   S+ LL+  
Sbjct: 238 NLLLYRDPDVDGMKTGHTDSAGYNLVASSKRNGRRVISVVVGTESMQARAAESSKLLNWA 297

Query: 264 FYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
             +    K             Y+   +       +    T         Q    +  +  
Sbjct: 298 LQSYDTPKLYEAETAISQVKVYKGADNAVNVGFIDATYITVPHGQAAQLQPVL-ETVQPV 356

Query: 320 FIDFEKITLLKNK 332
                K  +L   
Sbjct: 357 LAPISKGQVLGTV 369


>gi|167561357|ref|ZP_02354273.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           oklahomensis EO147]
          Length = 381

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 15/329 (4%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            P            + L+D  +  V+A    D    PASLTKLMTAY+VF  L  KK  +
Sbjct: 13  APGAVPPPGVNARSWVLVDATSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKITM 72

Query: 77  TTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
              +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E +F
Sbjct: 73  EQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEAQF 132

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  ++ LG++ THF + +G+    HYTTA D+A LS  +  D+P Y   F +K   
Sbjct: 133 VNMMNAEAQRLGMTGTHFADVNGMPDPQHYTTAGDLAKLSTHLIRDYPDYYSIFSVKDFT 192

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGAL 247
               K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G  
Sbjct: 193 YNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRSLPGATDATRRLVTVMMGET 252

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQK 301
             + R + S  +L+ G+      +             Y+   +N    + ++  +   + 
Sbjct: 253 KESDRVQDSMKMLNYGYTAFDSVRLYKAGQAIDTPRIYKGKSNNVQVGVKKDQFITVPRG 312

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLK 330
                  ++       +   D + +  +K
Sbjct: 313 MADKVKPEVALNAPLIAPLADGQAVGSVK 341


>gi|295109899|emb|CBL23852.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 394

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 89/356 (25%), Positives = 149/356 (41%), Gaps = 22/356 (6%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSI----AETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++       L +I   +LS IFP  +     +         L++  TG ++ E   +  
Sbjct: 1   MKKRHLRITGLFLIICMILSTIFPVRAETESISPEILAASGILMEVETGKILYEKDSNTR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS+TK+MT  ++F  L   K  L   +T S +A     S    ++G   +++  +K 
Sbjct: 61  RCPASVTKVMTLLLIFEQLDSGKLSLNDTVTTSAHAKSMGGSQVFLEEGEQQSVETMIKC 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARD 169
           +++ S ND +VA+AE +  +E+ FV  MN  ++ LG+  THF++  G+     HYT+A D
Sbjct: 121 IVIASGNDASVAMAEHIAGSEQSFVNRMNQRAEELGMKNTHFVDCCGLTDSDEHYTSAYD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADGMKTGFT 221
           +A++S  +    PQ   Y  I    I              NTN  + T+ G  G+KTG T
Sbjct: 181 IALMSRELIRKHPQIFEYSSIWMENITHVTAQGTKKFGLTNTNRLIRTYPGCKGLKTGST 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIK 278
             + F + A A +   SL++V++ A D   R K +++LL  GF       D         
Sbjct: 241 SKAKFCLSAVAERDGLSLLSVVMAAPDYKARLKDASALLDYGFDRCSLYIDENPEPLPEI 300

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              +   S      ++       +        KE K            +     I 
Sbjct: 301 TIQKGISSKVSLKYADTFRYVSTDGEKITAPKKELKLPSKAEAPVAADSQAGELIY 356


>gi|33152983|ref|NP_874336.1| D-alanyl-D-alanine carboxypeptidase fraction A [Haemophilus ducreyi
           35000HP]
 gi|33149208|gb|AAP96725.1| penicillin-binding protein 5 [Haemophilus ducreyi 35000HP]
          Length = 393

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 91/352 (25%), Positives = 153/352 (43%), Gaps = 18/352 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLS---------IAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++    I++  L+     ++          A       Y L+D N+G V+A   P    +
Sbjct: 3   KRLFTSISLVALAFSHSAVAVDASVEFGISAPQLNAQTYVLMDYNSGAVLASLNPQQRQH 62

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALK 109
           PASLTK+MT+YVV   +K+ K   +  +T+S+NA                + +++ + ++
Sbjct: 63  PASLTKMMTSYVVGDAIKQGKVKNSDMVTVSENAWARKFPGSSLMFLDLNTQVSVADLMR 122

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            LI+ S ND AVA+AE    +++ F+  MN   +  GL  THF   HG+ +   Y++A D
Sbjct: 123 GLIIVSGNDAAVALAEHTSGSQQAFIDQMNKFGQQFGLKNTHFTTVHGLDEESQYSSALD 182

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           MAI+   +  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+N
Sbjct: 183 MAIIGAHVIRDQPEEYKIYSEKEFKYNIKKPQPNRNGLLWDKTMNVDGMKTGHTNQAGYN 242

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           +VASA   +  LI+V++G      R   S  LL  GF N    K +           Y  
Sbjct: 243 LVASATNSNTRLISVVMGVPTYKGREVESKKLLQWGFANFETVKSLPAGQTVSEQGVYYG 302

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +        +   T  +    + +++     +       K  ++   I +
Sbjct: 303 ESNKVQLGTLTDSFVTIPKGKTTDLKVRHELTPKHLEAPLTKGQVVGKVIYQ 354


>gi|308069568|ref|YP_003871173.1| Penicillin-binding protein dacF precursor (D-alanyl-D-alanine
           carboxypeptidase) [Paenibacillus polymyxa E681]
 gi|305858847|gb|ADM70635.1| Penicillin-binding protein dacF precursor (D-alanyl-D-alanine
           carboxypeptidase) [Paenibacillus polymyxa E681]
          Length = 404

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 85/358 (23%), Positives = 147/358 (41%), Gaps = 25/358 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFL-----------------SIAETNKLPYYTLLDTNTGHVIAE 44
           ++ +  I   +++     +                 +     +     L+D +TG VI E
Sbjct: 10  KKVVAFILACLVALTAVPVGGWAEESRPESKTKEGSAAELAPEALSAILMDADTGTVIYE 69

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                   PAS+TK+MT  +    +++ K  LT  +  S+ AS    S    + G  MT+
Sbjct: 70  KNSREKLPPASITKIMTMLLTMEAIQDGKLKLTDKVRASEYASSMGGSQIFLEPGEEMTV 129

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           D  LK + + S ND +VA+AE +  +E+ FV  MN   + LGL  THF N +G+    HY
Sbjct: 130 DEMLKGIAMASGNDASVAMAEKIAGSEQAFVGMMNAKVQQLGLKDTHFANCNGLPVENHY 189

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGTFLGADGMKTGF 220
           ++A D+A++S  +        +    +       +K     NTN  V  + GADG+KTG+
Sbjct: 190 SSAHDIAVMSRELLKYPQITKYTGAYQDYLRKSSVKPFWLVNTNKLVRFYTGADGLKTGY 249

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T  + F + A+A +    ++AV+LG  +   RN   +S+    F   T +          
Sbjct: 250 TAEAKFCLSATAKRDGLRVVAVVLGEPNTKIRNNEVSSMFDYAFSQYTMKSIYKPGELLG 309

Query: 281 YQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             +     +P +  +         K+  N  T   E +   S          +   + 
Sbjct: 310 SVKVEKGVLPELKIQADRSYSVLVKKGGNKQTLRHELQLPPSLKAPVRAGDPIGKLVV 367


>gi|149916443|ref|ZP_01904962.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter sp.
           AzwK-3b]
 gi|149809713|gb|EDM69567.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter sp.
           AzwK-3b]
          Length = 482

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 4/324 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  ++  A   +  + P  +IA         ++D  +G V+  +  D   +PASLTK+MT
Sbjct: 10  RWSVIAFATIWMLVVVPLSAIAAP---YAAMVMDARSGEVLHAHNADTRLHPASLTKMMT 66

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            YVVF  ++  +  L T +TIS++A+  PPS    + G  + L + ++   +KSAND A 
Sbjct: 67  LYVVFEAVENGEIGLDTMVTISQHAASEPPSKLGLRAGQKIRLRHLIRAAAIKSANDAAT 126

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE++  +E +F + MN T+K +G++ T F NAHG+ + GH +TARDM IL   +  D+
Sbjct: 127 ALAEAIEGSEARFARRMNRTAKAMGMTRTTFKNAHGLTESGHLSTARDMTILGRHVFYDY 186

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+Y + F     +   +K  +TN A + ++ GADG+KTG+T A+GFN+VASA +G + +I
Sbjct: 187 PEYYNLFSRITADAGVRKVYHTNRALLNSYRGADGIKTGYTRAAGFNLVASAERGGERII 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           A + G     +RN   A LL +GF     R  ++   +  Y   + +  P+ +       
Sbjct: 247 ATVFGGNSTASRNAKVAELLDLGFRKAPSRVALHKPRRPAYAGRMQDSAPDGAFGKTVRL 306

Query: 301 KEIINYNTQMKEAKDKESHFIDFE 324
                    ++             
Sbjct: 307 ATAAAVKRSLRPQMRPSVEPAPVV 330


>gi|91977185|ref|YP_569844.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB5]
 gi|91683641|gb|ABE39943.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB5]
          Length = 432

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 8/319 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++     + P   L+D  +G V+ E   D    P+S+ KLMT  +VF  L + +  LT  
Sbjct: 64  VAGGYETEAPTAILIDAESGSVLFEKNADELRPPSSMLKLMTVELVFHLLTKGEIKLTDD 123

Query: 80  ITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             IS+NA          S    +  S +++D+ L+  I++S ND  +A+AE +  +E+ F
Sbjct: 124 YRISENAWRRGGAPAGSSTMFAEIHSRVSIDDLLRGAIIQSGNDSCIALAEGIAGSEQAF 183

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
            + M   ++ +GL+ + F N++G+   G+  + R++  L+  +   +P Y   F  K   
Sbjct: 184 AERMTKRAREIGLAQSTFANSNGLPDPGNKMSVRELGRLARHLIQTYPDYYKLFGEKEFT 243

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  N N  + T  GADG+KTG+T   G+ +V SA+Q    LI V+ G  D + R  
Sbjct: 244 WNKIRQTNRNPLLNTMPGADGLKTGYTKDGGYGMVGSAVQNGTRLIVVVNGVEDADDRAS 303

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            +  LL  GF N   R          Y +    E   +        + ++  N   K   
Sbjct: 304 EAKKLLEWGFRNFESRPLFAAQATVGYARVFGGEKRYVGLTPVEPVRVMVRKNGSDKLLA 363

Query: 315 DKE---SHFIDFEKITLLK 330
                       E    + 
Sbjct: 364 RIVYTGPIAAPVEAGHRIG 382


>gi|186474981|ref|YP_001856451.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia phymatum
           STM815]
 gi|184191440|gb|ACC69405.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia phymatum
           STM815]
          Length = 409

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 17/351 (4%)

Query: 3   QFLVIIAM--AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +F +  A+  A++++               + L+D  +  V+A   PD    PASLTKLM
Sbjct: 25  KFALGFALPAALVASTAFAQVPPPGVNARSWVLVDATSNQVLASGNPDERVEPASLTKLM 84

Query: 61  TAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           TAY+ F  L  KK  +   I  S+         S    +    +T+ + +  +I++S ND
Sbjct: 85  TAYLTFEALASKKITMDQSINPSEAVRRVRNDESRMFIEANKPVTVHDLVYGMIIQSGND 144

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+A+AE +  +E +FV  MN  ++ LG+  THF + +G+    HYTTA D+AILS R+ 
Sbjct: 145 AAIALAELVGGSEAQFVNMMNAEAQKLGMKNTHFADVNGMPDPQHYTTAGDLAILSARLI 204

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ---- 234
            D+P Y + F +K       K PN N  +      DG+KTG T A+G+ ++ASA +    
Sbjct: 205 RDYPDYYNIFSVKEFTYNKIKQPNRNRLLWIDPTVDGLKTGHTQAAGYCLIASAKRSLPG 264

Query: 235 ---GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSN 287
                + L+ V++G    + R + S  +L+ G+      +             Y+ +   
Sbjct: 265 VPDASRRLVTVMMGEQKEHDRVQDSLKMLNYGYSAYDAVRLYKANQVVETPRVYKGSQDT 324

Query: 288 EVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               ++ +  +   +        Q++ A    +     +++  +K     K
Sbjct: 325 VKLGVTTDQYITLPKGMADKAKPQIEHADPLIAPIAQGQQVGTVKFVADGK 375


>gi|325265494|ref|ZP_08132216.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
 gi|324029273|gb|EGB90566.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
          Length = 423

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 155/331 (46%), Gaps = 11/331 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +       P   L++ +TG VI E   D    PAS+TK+MT  ++F  L + K  
Sbjct: 58  AADTQTAGPEVSAPSAVLMEASTGEVIFEKDADTARPPASVTKIMTMLLIFDALADGKIK 117

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   +T S+ A+    S    + G T T+D  LK + V SAND  VA+AE +C  E++FV
Sbjct: 118 LEDQVTTSEFAASMGGSQVFLEPGETQTVDTMLKCISVASANDACVAMAEYICGNEEEFV 177

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + MN  +K LG+  THF+N +G+   GH TTARD+A++S  + T +PQ   Y  I    I
Sbjct: 178 KQMNERAKGLGMENTHFVNCNGLDVDGHVTTARDIALMSREMITKYPQIHDYCMIWMENI 237

Query: 196 KGKK--------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                         NTN  V  +  A G+KTG T  + F + A+A + D  +IAVI+ A 
Sbjct: 238 THTTKKGTTEFGLTNTNKLVRQYEYATGLKTGSTGLAKFCVSATAKKNDIEMIAVIMAAG 297

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVP-NISEEVCTTQKEII 304
           D   R K + +LL+ GF      K      +     +  + + V    ++          
Sbjct: 298 DSKARFKDATTLLNYGFGKCQVYKDESPEKLKDLEVKGGVEDTVHCEYADSFSYLDTSGA 357

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           N +   K+ K K+S     +K     + I +
Sbjct: 358 NLSGITKKLKVKKSLDAPLKKGDKAGSLIYE 388


>gi|313114949|ref|ZP_07800445.1| putative D-alanyl-D-alanine carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622742|gb|EFQ06201.1| putative D-alanyl-D-alanine carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 368

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 88/324 (27%), Positives = 143/324 (44%), Gaps = 9/324 (2%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                A         L+D  TG ++ E   D     AS+TK+MT  + F  + + +  + 
Sbjct: 7   AAAQPALELPCRAACLIDQQTGTILYEKNADQQMPIASITKVMTLLLTFEAVHDGRIAMD 66

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           T + +S++A     S    + G   TLD  +K + V SAND AVA+AE +  +E  FVQ 
Sbjct: 67  TLVPVSEHAYHMGGSQIWLEPGEQFTLDEMIKAICVSSANDAAVAVAELVGGSEPGFVQM 126

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--YMHYFQIKGLEI 195
           MN  +  LG+  T F NA G+   GH +TA D+AI+S  I    P+  +        L  
Sbjct: 127 MNARAAELGMVNTTFHNACGLDTEGHLSTAHDVAIMSREILNTCPEVLHYTGIWTDTLRG 186

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              +  NTN  +  + G  G+KTG T  +G  I ASA +    LIAV+LG+L  + R   
Sbjct: 187 GATQLVNTNKLLKRYNGITGLKTGTTSGAGVCISASATRDGLDLIAVVLGSLSSSERFTA 246

Query: 256 SASLLSMGFYNKTDRKK---INYIIKDFYQQNLSNEVPN----ISEEVCTTQKEIINYNT 308
           + +LL  GF            +  +    + +    VP     + E +   ++       
Sbjct: 247 ATTLLDYGFAAYAAVPLPAMEDRPLLIKVKGSAEESVPLDYTALPETLLMPKENAAALTA 306

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
           Q+   ++ E+     + +  ++  
Sbjct: 307 QLDLPQELEAPVQLGQTVGTVRIL 330


>gi|110804719|ref|YP_688239.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella flexneri 5
           str. 8401]
 gi|110614267|gb|ABF02934.1| penicillin-binding protein 5 [Shigella flexneri 5 str. 8401]
          Length = 427

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 34  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 93

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 94  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 153

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 154 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 213

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 214 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 273

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 274 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 333

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 334 WFSDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 385


>gi|317047508|ref|YP_004115156.1| beta-lactamase [Pantoea sp. At-9b]
 gi|316949125|gb|ADU68600.1| Beta-lactamase [Pantoea sp. At-9b]
          Length = 401

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 91/319 (28%), Positives = 143/319 (44%), Gaps = 11/319 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + L+D N+G V+AE   D   +PASLTK+MT+YV+   LK  K      +TI +
Sbjct: 37  QIDAKAWVLMDYNSGKVLAEANADQRLDPASLTKMMTSYVIGQALKAGKIHDDDMVTIGQ 96

Query: 85  NASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +A                K G  + +    K ++++S ND  +A+A+ +  ++  F+  M
Sbjct: 97  DAWATGNPKLKGSSLMFLKPGDRIPVAELNKGIVIQSGNDACIAMADYVAGSQDSFIGLM 156

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           NN +K  GL  THFM  HG+   G Y+TARDMAI+  R+ +D P+     + K       
Sbjct: 157 NNYAKAFGLQNTHFMTVHGLDADGQYSTARDMAIIGQRLISDVPEEYALNKQKEFTFNNI 216

Query: 199 KYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           K  N N     + L  DG+KTG T  +G N+V+SA  GD  LI+V+LGA     R + S 
Sbjct: 217 KQMNRNRLLWSSNLKVDGIKTGHTSGAGNNLVSSATDGDMRLISVVLGAETDALRFRESE 276

Query: 258 SLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            LL+ GF        I           +  +       ++++   T  +    N +    
Sbjct: 277 KLLTWGFRFFDTVTPIKADKPFAQQRVWFGDRKQVNLGVAKDASVTIPKGQMNNLKASYT 336

Query: 314 KDKESHFIDFEKITLLKNK 332
                     +K  ++   
Sbjct: 337 LTSPQLEAPLKKNQVVGTI 355


>gi|121603114|ref|YP_980443.1| Serine-type D-Ala-D-Ala carboxypeptidase [Polaromonas
           naphthalenivorans CJ2]
 gi|120592083|gb|ABM35522.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Polaromonas naphthalenivorans CJ2]
          Length = 402

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 100/350 (28%), Positives = 155/350 (44%), Gaps = 20/350 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            V++    L                 Y LLD     ++A    D P  PASLTKLMT Y+
Sbjct: 18  FVLLVSVALPAAHAQAPQVPEIAARSYLLLDVTANQILAAKDIDSPVEPASLTKLMTEYL 77

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           VF  LK KK  L     +S+ A + P S         + +++ +K +IV+S ND  +A+A
Sbjct: 78  VFDALKSKKITLQQTFGVSQRAWKMPGSRMFIDPKMQVPVEDLIKGMIVQSGNDATMALA 137

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  T + FV+ MN  +K LG+ +T + N  G+ + GH TTARD++ILS R+ +DFP Y
Sbjct: 138 EGVGGTAEHFVELMNQQAKALGMKSTSYKNPEGLTEAGHITTARDLSILSTRLMSDFPDY 197

Query: 185 MHYFQIKGLEI---KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ------- 234
           + Y  IK             N N  +      DG+KTG T A+G+ ++A+A +       
Sbjct: 198 IGYSAIKKYRYPGTPATNDTNRNTLLFRDPTVDGLKTGHTNAAGYCMIATAKREFPNLGA 257

Query: 235 ----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSN 287
               G + L+A++LG    + R   S  LL+ G+      K  +     +     +    
Sbjct: 258 AGKPGGRRLLAIVLGTTSDSARATESQKLLNWGYTAFEAVKLFDAGQAVVTPAVWKGKDA 317

Query: 288 EVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            V     E   V  T        TQ+   +   + F   + +  LK  + 
Sbjct: 318 VVKLGRPEAIVVAVTAGSASRLKTQVARPEPLVAPFKKGQPVGSLKIMLG 367


>gi|163738564|ref|ZP_02145978.1| Serine-type D-Ala-D-Ala carboxypeptidase [Phaeobacter gallaeciensis
           BS107]
 gi|161387892|gb|EDQ12247.1| D-alanyl-D-alanine carboxypeptidase [Phaeobacter gallaeciensis
           BS107]
          Length = 396

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 8/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +  A  +L ++    + A   +     +LD  T  V+     D    PAS++KLMT YV 
Sbjct: 14  LTCAAGLLVSLSALSAAAFDTRARAAYVLDQETDTVLLAKNADLALPPASMSKLMTLYVA 73

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  +++ +  L   + +S++A  Y  S         + +++ L+ +IV S ND  V +AE
Sbjct: 74  FEAIRDGRLTLDERLPVSEHAMSYKGSTMFLNTQDRVRVEDLLRGIIVLSGNDACVVLAE 133

Query: 126 SLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           +L     E  F ++M   ++ +G+  + F N++G    GH  +  D+AIL+ ++  DFPQ
Sbjct: 134 ALSPDGTEAGFARYMTKRAQEMGMENSTFANSNGWPAAGHRMSVEDLAILAEKLIEDFPQ 193

Query: 184 YMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           Y   F  +  E          N N  +G  +GADG+KTG T  +G+ +V SA QGD+ +I
Sbjct: 194 YYPLFAEREFEFDGRAPSNVRNRNPLLGLGIGADGLKTGHTSEAGYGLVGSAAQGDRRVI 253

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVC 297
            VI G      R + + ++++  F     +      +   +    +     V  +  E  
Sbjct: 254 FVITGLDSTTARAEEAEAIVNWSFRQFAKKTVAKAGVPVAEAEVWRGAEATVGLVPAEDL 313

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 +       E           EK   L   + +
Sbjct: 314 NVLLPALAGREITGEVVYTGPIDAPIEKGQKLAELVLQ 351


>gi|163743049|ref|ZP_02150432.1| D-alanyl-D-alanine carboxypeptidase [Phaeobacter gallaeciensis
           2.10]
 gi|161383732|gb|EDQ08118.1| D-alanyl-D-alanine carboxypeptidase [Phaeobacter gallaeciensis
           2.10]
          Length = 396

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 83/338 (24%), Positives = 146/338 (43%), Gaps = 8/338 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +  A  +L ++    + A   +     +LD  T  V+     D    PAS++KLMT YV 
Sbjct: 14  LTCAAGLLVSLSALSAAAFDTRARAAYVLDQETDTVLLAKNADLALPPASMSKLMTLYVA 73

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  +++ +  L   + +S++A  Y  S         + +++ L+ +IV S ND  V +AE
Sbjct: 74  FEAIRDGRLTLDERLPVSEHAMSYKGSTMFLNTQDRVRVEDLLRGIIVLSGNDACVVLAE 133

Query: 126 SLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           +L     E  F ++M   ++ +G+  + F N++G    GH  +  D+AIL+ ++  DFPQ
Sbjct: 134 ALSPDGTEAGFARYMTKRAQEMGMENSTFANSNGWPAAGHRMSVEDLAILAEKLIEDFPQ 193

Query: 184 YMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           Y   F  +  E          N N  +G  +GADG+KTG T  +G+ +V SA QGD+ +I
Sbjct: 194 YYPLFAEREFEFDGRAPSNVRNRNPLLGLGIGADGLKTGHTSEAGYGLVGSAAQGDRRVI 253

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVC 297
            VI G      R + + ++++  F     +      +   +    +     V  +  E  
Sbjct: 254 FVITGLDSTTARAEEAEAIVNWSFRQFAKKTVAKAGVPVAEAEVWRGAEATVGLVPAEDL 313

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 +       E           EK   L   + +
Sbjct: 314 NVLLPALAGREITGEVVYTGPIDAPIEKGQKLAELVLQ 351


>gi|301154770|emb|CBW14233.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Haemophilus parainfluenzae T3T1]
          Length = 395

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 146/349 (41%), Gaps = 14/349 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +++ ++   +   S                     Y L+D N+G V+A   PD    PAS
Sbjct: 8   LKKIVLFSGLMAASTFAAAEDLQYGIAVPEVNAQTYVLMDYNSGAVLASLNPDQRQYPAS 67

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLI 112
           LTK+MT+YVV + LK+ K      +TI ++A        S         +++ +  K +I
Sbjct: 68  LTKMMTSYVVGAALKQGKIHNEDMVTIGESAWGRNFPDSSKMFLNLNQQVSVGDLNKGII 127

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  VA+AE +  T   FV  MN   +  GL  T+F   HG+     Y+TARDMAI
Sbjct: 128 IVSGNDACVAVAEHISGTVANFVDTMNKYVQQFGLKNTNFTTPHGLDDPNQYSTARDMAI 187

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           +   I  D P+    +  K       K PN N       +  DGMKTG T  +G+N+VAS
Sbjct: 188 IGAHIIRDLPEEYKIYAEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVAS 247

Query: 232 AIQ-GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           A    +  LI+V++G      R   S  LL  GF N    K      K      Y  +  
Sbjct: 248 ATSPNNMRLISVVMGVPTYKGREVESKKLLQWGFANFETLKAHKANEKISTQSVYYGDKG 307

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                + ++   T  +    + + +   D +       K  ++   + +
Sbjct: 308 EIQLGLLQDGFITVPKGKQADLKARYELDNKYLQAPLTKGQVVGKIVYQ 356


>gi|126725140|ref|ZP_01740983.1| D-alanyl-D-alanine carboxypeptidase family protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126706304|gb|EBA05394.1| D-alanyl-D-alanine carboxypeptidase family protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 452

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 102/320 (31%), Positives = 161/320 (50%), Gaps = 6/320 (1%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  A+       ++           ++D  +G V+     D   +PASLTK+MT YV F 
Sbjct: 1   MLCALFLAPISAIAAP-----YAAMVIDARSGEVLHSRNADSRLHPASLTKMMTLYVTFE 55

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +++ +  L T + ISK A+  PPS    + G  + L   ++   VKSAND A A+ E++
Sbjct: 56  AIRKGEISLDTRVRISKKAAAEPPSKLGLQAGQRIQLRYLIRAASVKSANDAATALGEAV 115

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  F + MN T+K LG+S T F NAHG+ + GH +TARDM  L  R+  D+PQY + 
Sbjct: 116 SGSEAAFARRMNRTAKALGMSRTTFKNAHGLTESGHLSTARDMTTLGRRLFFDYPQYYNL 175

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           F  +  +   KK  NTN   + ++ G+DG+KTG+T A+GFN+VASA++G++ +IA + G 
Sbjct: 176 FSRRTTDAGVKKVNNTNTRFLNSYRGSDGIKTGYTNAAGFNLVASAVRGNERIIATVFGG 235

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
                RN   A LL +GF       K+       Y  ++       +  +     + +  
Sbjct: 236 RSTANRNAKVAELLDLGFRRAPSTSKVIKPNAPVYGNDVVAGGKGKTIRLVMAVNKSLRP 295

Query: 307 NTQMKEAKDKESHFIDFEKI 326
            ++   AK  E   I     
Sbjct: 296 KSRPITAKPTEETMIAVADG 315


>gi|255261606|ref|ZP_05340948.1| D-alanyl-D-alanine carboxypeptidase [Thalassiobium sp. R2A62]
 gi|255103941|gb|EET46615.1| D-alanyl-D-alanine carboxypeptidase [Thalassiobium sp. R2A62]
          Length = 389

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 84/338 (24%), Positives = 148/338 (43%), Gaps = 8/338 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +      ++      ++     +     ++D  TG ++ E   D    PAS++KLMT Y+
Sbjct: 8   VFATIAVVVFGASAAIAQNFATQATAAIVIDQTTGTLLMEKNADEALPPASMSKLMTLYM 67

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  + + +  L   + +S++A  Y  S    K+G  + +++ ++ +IV S ND    IA
Sbjct: 68  AFEAVSDGRLRLDEELPVSQHAMNYGGSTMFLKRGERVKVEDLIRGIIVLSGNDACAVIA 127

Query: 125 ES--LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           E+     TE  F + M   ++ LG+  + F N++G  Q GH  + RD++IL+ R+ TD+P
Sbjct: 128 EALSTDGTEAGFGRMMTARARELGMMNSTFTNSNGWPQAGHRMSMRDLSILADRLITDYP 187

Query: 183 QYMHYFQIKGLEIKGKKYP---NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            Y   F  K      K+     N N  +G  +GADG+KTG T  +G+ +V SA QG++ +
Sbjct: 188 TYYPLFSQKEFMFDEKESKNRLNRNPLLGLGIGADGLKTGHTNEAGYGLVGSAKQGNRRI 247

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEV 296
           I VI G      R + S  +++  F     R       K           + V   + E 
Sbjct: 248 IFVITGLDSAAARAEESEKIVNWAFRQFVHRDITEAGTKIAEADVWMGDVDRVGLTTVED 307

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +    ++  +    E           E+   L   + 
Sbjct: 308 LSLLVPVLKQDDITAEVVYDGPIEAPIEEGAQLAELVI 345


>gi|24112068|ref|NP_706578.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella flexneri
           2a str. 301]
 gi|30062179|ref|NP_836350.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella flexneri
           2a str. 2457T]
 gi|82543078|ref|YP_407025.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella boydii
           Sb227]
 gi|24050895|gb|AAN42285.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Shigella flexneri 2a str. 301]
 gi|30040424|gb|AAP16156.1| D-alanyl-D-alanine carboxypeptidase, fraction A; penicillin-binding
           protein 5 [Shigella flexneri 2a str. 2457T]
 gi|81244489|gb|ABB65197.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Shigella boydii
           Sb227]
 gi|313649723|gb|EFS14147.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri 2a str.
           2457T]
 gi|332760998|gb|EGJ91286.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri
           4343-70]
 gi|332763369|gb|EGJ93609.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-671]
 gi|332768266|gb|EGJ98451.1| penicillin-binding protein 6 [Shigella flexneri 2930-71]
 gi|333007457|gb|EGK26937.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri VA-6]
 gi|333007869|gb|EGK27345.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-218]
 gi|333010043|gb|EGK29478.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-272]
 gi|333020876|gb|EGK40136.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-227]
 gi|333021546|gb|EGK40796.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri K-304]
          Length = 403

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +        +K  ++   
Sbjct: 310 WFSDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|323499952|ref|ZP_08104910.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sinaloensis DSM 21326]
 gi|323314969|gb|EGA68022.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sinaloensis DSM 21326]
          Length = 392

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 21/355 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP------------FLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++  +I ++   +                 +  A       Y LLD ++G V+A+   +
Sbjct: 1   MKKTTLIKSVFASTVALSATFATTAFATPIVVPDAPQIAAKGYVLLDYHSGKVLAQKEMN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLD 105
              +PASLTK+MT+YV+   L+     L   +TISKNA        S    + G+T+ ++
Sbjct: 61  TKLSPASLTKMMTSYVIGQELERGNISLQDDVTISKNAWAKNFPDSSKMFIEVGTTVKVE 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           +  + +I++S ND  VA+AE +  +E  FV  MN  +  +G+  THF N HG+     Y+
Sbjct: 121 DLNRGIIIQSGNDACVAMAEHIAGSEDAFVDLMNAWANTIGMKDTHFANVHGLDNPNLYS 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           T  DMA+L   +  D P     +  K     G    N N       +  DG+KTG T  +
Sbjct: 181 TPYDMALLGSALIRDVPDEYRIYSDKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDF 280
           G+++V+SA +G   L+AV++G    N R   S  LLS GF                 +  
Sbjct: 241 GYSLVSSATEGKMRLVAVVMGTKSANARKSESKKLLSYGFRFFETVAPHKAGETFVEEKI 300

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  +       + ++   T       N +     +KE       K  ++     +
Sbjct: 301 WMGDKDTVALGLDQDTYVTLPRGQAKNLKASFVLEKE-LEAPISKGEVVGKLYYQ 354


>gi|165924684|ref|ZP_02220516.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166009807|ref|ZP_02230705.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211384|ref|ZP_02237419.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167419833|ref|ZP_02311586.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424129|ref|ZP_02315882.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|270487038|ref|ZP_06204112.1| serine-type D-Ala-D-Ala carboxypeptidase [Yersinia pestis KIM D27]
 gi|294503318|ref|YP_003567380.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Z176003]
 gi|165923744|gb|EDR40876.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991203|gb|EDR43504.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166207155|gb|EDR51635.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166962574|gb|EDR58595.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167056978|gb|EDR66741.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|262361357|gb|ACY58078.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis D106004]
 gi|262365105|gb|ACY61662.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis D182038]
 gi|270335542|gb|EFA46319.1| serine-type D-Ala-D-Ala carboxypeptidase [Yersinia pestis KIM D27]
 gi|294353777|gb|ADE64118.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Z176003]
          Length = 400

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 32  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 91

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 92  TVGKDAWATGNPALRGSSLMFLKPGDRVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 151

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 152 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 211

Query: 195 IKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +  N N  +       DGMKTG+T  +G+N+VASA  G   LI+V+LGA     R 
Sbjct: 212 FNKIRQTNRNRLLWNSSLNVDGMKTGYTNGAGYNLVASATDGPMRLISVVLGAPSDKVRF 271

Query: 254 KVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF        I        +  +  + S     ++E+   T  +    N +
Sbjct: 272 SESEKLLTWGFRFYETVVPIKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLK 331

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                ++        K  ++   
Sbjct: 332 ASYTLNQTELRAPLAKHQVVGTI 354


>gi|220932948|ref|YP_002509856.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Halothermothrix orenii H 168]
 gi|219994258|gb|ACL70861.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Halothermothrix orenii H 168]
          Length = 388

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 13/344 (3%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++    + II ++++  +    +      +    L+D  +G V+ E   D    PAS+T
Sbjct: 1   MKKIATTVAIIIVSLILMVNNARAGGFDIGVDAAILIDAESGQVLYEKNADKKLPPASIT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  +    + +    L + +T+S+ A     S       + + L + LK + + SAN
Sbjct: 61  KIMTLLLTMEEVDKGNISLDSMVTVSQLAESMGGSQIYLAADTRLKLRDLLKAVTIASAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWR 176
           D  VA+AE++  TE+ FV+ MN  ++ LG+  THF N  G+     HYTTARD+AI++  
Sbjct: 121 DACVAVAEAVAGTEENFVRWMNKRARELGMKNTHFSNTTGLPTDGEHYTTARDVAIMARE 180

Query: 177 IKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           +           +    I     +     NTN  +  + G DG+KTG T A+G+ + A+A
Sbjct: 181 LIKHPQVLKWASIWVDYIDLPNGRKAMLTNTNRLINDYPGMDGLKTGHTDAAGYCLAATA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNE 288
            +    LI+VI+       R + +A LL  GF +      +    K    +      ++ 
Sbjct: 241 RRNGMRLISVIMKGETEREREEATARLLDYGFNSFEKYIVLKKGHKVHNIEVPNGTRTST 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           V   + ++    K+        K   + E      +K  +L   
Sbjct: 301 VAETANDLKVVVKKGEKDLLTKKVVIN-EPVEAPVKKGDVLGKI 343


>gi|160892702|ref|ZP_02073492.1| hypothetical protein CLOL250_00232 [Clostridium sp. L2-50]
 gi|156865743|gb|EDO59174.1| hypothetical protein CLOL250_00232 [Clostridium sp. L2-50]
          Length = 464

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 92/318 (28%), Positives = 155/318 (48%), Gaps = 11/318 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             + P+  L++  TG V+ E   D    PAS+TK+MT  +VF  +K     ++  +T+S+
Sbjct: 107 QLESPFCILMEATTGTVLYEKNADEARKPASVTKVMTLLLVFEAMKAGDYQMSDIVTVSE 166

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A+    S   F+ G   T+++ +K +I+ S ND AVA+AE    +E+ FVQ MN+ +K 
Sbjct: 167 HAASMGGSQCFFETGEQQTVEDMIKCIIIASGNDAAVAMAEFTAGSEEAFVQRMNDRAKE 226

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           LG+  THF+NA G+   GH T+ARD+AI+S ++  + P+ + Y  I    I  K      
Sbjct: 227 LGMEHTHFVNACGLDADGHETSARDIAIMSRQLIDEHPEILKYSGIWMDSIIHKTARGES 286

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  +  + GA G+KTG+T  + + + A+A +   +LIAVI+GA  ++ RNK  
Sbjct: 287 RFDLANTNKFLNIYTGATGLKTGYTATAKYCMSATANRNGITLIAVIMGAETKDIRNKEV 346

Query: 257 ASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             L   G+ N     D   ++                  + +  +        +   K  
Sbjct: 347 CKLFDYGYANCNLYKDENVLDTRSVSIENGISDELAIESASDFSSVLLRGEKADDVKKTP 406

Query: 314 KDKESHFIDFEKITLLKN 331
             +E+      K  ++  
Sbjct: 407 IQEETLTAPINKGDVIGK 424


>gi|148653555|ref|YP_001280648.1| Serine-type D-Ala-D-Ala carboxypeptidase [Psychrobacter sp. PRwf-1]
 gi|148572639|gb|ABQ94698.1| Serine-type D-Ala-D-Ala carboxypeptidase [Psychrobacter sp. PRwf-1]
          Length = 413

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 88/326 (26%), Positives = 151/326 (46%), Gaps = 9/326 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                      Y L+D +TG ++AE   D P  PASLTK+MT++++   L   +   T P
Sbjct: 54  PVPPPEMDNTAYILMDYDTGVILAEKNADQPLPPASLTKMMTSHIIEKKLMSGEMKETDP 113

Query: 80  ITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           + ++++A        S        +    + L+ +I++S ND + A+AE +  +E  F Q
Sbjct: 114 VLMTESAWCRGTSDQSCMYVPVNKSAPAIDMLRGIIIQSGNDASKAMAEHIAGSESAFAQ 173

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  +K LG++ THF+NA G+   GH  +ARD+AILS  I      Y   +  K     
Sbjct: 174 IMNAEAKALGMTNTHFVNATGMPDEGHRASARDLAILSRAIIKQGGDYYKLYSEKEFTYN 233

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                N N  + T    DG+KTG T A+G+ + AS+ + D  LI+VI+G+     R   S
Sbjct: 234 NITQGNRNALLRTDPTVDGLKTGHTDAAGYCLAASSKRNDMRLISVIMGSKSMQARADQS 293

Query: 257 ASLLSMGFYNKTDRKK------INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             LL+ GF +   +        ++ +   F +Q+        + +V   + +    +T +
Sbjct: 294 RELLNWGFGHFDTKVVAPANQFVDSVPVYFGKQDSVKAATGEALKVLIAKTQTDKISTVV 353

Query: 311 KEAKDKESHFIDFEKITLLKNKITKK 336
             +   E+     ++I  +   +  K
Sbjct: 354 NISDKVEAPIKKGQEIGRMMAVVDGK 379


>gi|262372977|ref|ZP_06066256.1| penicillin-binding protein 6 [Acinetobacter junii SH205]
 gi|262313002|gb|EEY94087.1| penicillin-binding protein 6 [Acinetobacter junii SH205]
          Length = 382

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 12/330 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y++   L + 
Sbjct: 16  FSYAATVLSAPPELNNKSYVLMDYETGQILAAKNENEKLAPASMTKMMTSYIIEQKLLKG 75

Query: 73  KAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           +      + ++++A        S        T T+   L+ +I++S ND + A+AE +  
Sbjct: 76  ELTENEQVRMNESAWCRGSSTESCMYVPLNGTATVLEMLRGIIIQSGNDASKAMAEHIAG 135

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
            E  F   MN  +K +G+  THF+N+ G+   GHY+TA+DMA+L+  I  D  +Y   + 
Sbjct: 136 NEGTFAHMMNQEAKRVGMVNTHFINSTGMPADGHYSTAKDMAVLAQHIIKDSSKYYPIYS 195

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI+VI G    
Sbjct: 196 EKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTEEAGYCLTTSSKRGPMRLISVIFGTPSM 255

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE--EVCTTQKEI 303
           N R   + +LL+ GF N                  +          ++E   V   + + 
Sbjct: 256 NERASQTRTLLAWGFANFETANVQPANQVLAKAKVWFGKEDEVQIGLAENFNVTMPKGQA 315

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNKI 333
               TQ+     +        K  ++   +
Sbjct: 316 DKIKTQIVV---QPKLNAPLAKGQVVGKLV 342


>gi|145633414|ref|ZP_01789144.1| hypothetical protein CGSHi3655_04260 [Haemophilus influenzae 3655]
 gi|145635213|ref|ZP_01790917.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           PittAA]
 gi|144985977|gb|EDJ92579.1| hypothetical protein CGSHi3655_04260 [Haemophilus influenzae 3655]
 gi|145267492|gb|EDK07492.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           PittAA]
          Length = 393

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + + ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSSFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKIMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|289578077|ref|YP_003476704.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           italicus Ab9]
 gi|297544350|ref|YP_003676652.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|289527790|gb|ADD02142.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           italicus Ab9]
 gi|296842125|gb|ADH60641.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 417

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 85/356 (23%), Positives = 158/356 (44%), Gaps = 26/356 (7%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++      ++ I +  ++ ++  +        P   L+D  TG V+ +        PAS
Sbjct: 1   MKKMVASLLILFILVVQITPVYANVPSPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++TA +           L   +T S N ++   ++     G  +TL+  L  ++++S
Sbjct: 61  TTKILTAIIAIEK-----GNLNDIVTASDNVTKIDGNSIFLSPGEQLTLEQLLYAIMLES 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+AIAE +  + + F + MN  +K +G   +HF+N +G+    HY+T  DMA+++ 
Sbjct: 116 ANDAAIAIAEHIGGSVENFAKMMNEKAKEIGAYNSHFVNPNGLPDENHYSTPYDMALIAR 175

Query: 176 RIKTDFP--------QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASG 225
               +           Y      K  +++     N     +   + GADG+KTG+T A+G
Sbjct: 176 YAMQNPEFRKIVTTIHYQIPPTNKFDKVRDLWLSNRLIKPSSFRYEGADGVKTGYTVAAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--Q 283
             + ASA +  + LI+VI+G    N     +  LL  GF N +  KK        Y    
Sbjct: 236 QVLAASATREGRRLISVIMGDQGTNI-WTDTIKLLDYGFQNFSLVKKTEKGEVVTYIDLG 294

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               ++P I++E       + +  +  TQ+   K+ ++     + +  +K  +  K
Sbjct: 295 KSHFKLPLIAKEDFYYEVPKGQENSIETQIILNKNIKAPINKGDILGYIKYTLNGK 350


>gi|253576351|ref|ZP_04853681.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844244|gb|EES72262.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 396

 Score =  199 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 87/357 (24%), Positives = 148/357 (41%), Gaps = 23/357 (6%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLSIAE-------------TNKLPYYTLLDTNTGHVIAEN 45
           M++       A  +  +++P  + A                      L+D +TG VI E 
Sbjct: 1   MKRRMLTWFAAFVLAVSVWPTYTSANHGGPHDGDDEIALAENALSAVLIDADTGTVIYEK 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                  PAS+TK+MT  +    +      LT  +T S+ A+    S    + G TMT+D
Sbjct: 61  KSHEKLPPASITKIMTMLLTMEAIDNGTLKLTDKVTTSEYAASMGGSQIFLEPGETMTVD 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             LK + + S ND +VA+AE +  +EK FV+ MN  ++ LGL  THF N +G+    HY+
Sbjct: 121 ELLKGVAMASGNDASVALAEKIAGSEKAFVKMMNERAQQLGLKDTHFANCNGLPVADHYS 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGTFLGADGMKTGFT 221
           +A D+AI+S  +        +    +        K     NTN  V  + GADG+KTG+T
Sbjct: 181 SAYDIAIMSRELLKHEEITKYTGAYQDYLRQGTEKPFWLVNTNKLVRFYSGADGLKTGYT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             + F + A+A +    LIAV+LG  +  TRN   +++    F                 
Sbjct: 241 SEAKFCLAATAKRDGLRLIAVVLGEPNTKTRNSEVSAMFDYAFSQYALLPIYQAGETIGK 300

Query: 282 QQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +        +    ++ +    K+ +  ++   +    E      +    +   + 
Sbjct: 301 VKVQKGMSAQLELTAAKPLNVLVKKGVKQDSITHKLIAPEKLAAPIKAGQTIGKLVV 357


>gi|145630679|ref|ZP_01786458.1| hypothetical protein CGSHi22421_02014 [Haemophilus influenzae
           R3021]
 gi|144983805|gb|EDJ91255.1| hypothetical protein CGSHi22421_02014 [Haemophilus influenzae
           R3021]
          Length = 393

 Score =  199 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|152978379|ref|YP_001344008.1| Serine-type D-Ala-D-Ala carboxypeptidase [Actinobacillus
           succinogenes 130Z]
 gi|150840102|gb|ABR74073.1| Serine-type D-Ala-D-Ala carboxypeptidase [Actinobacillus
           succinogenes 130Z]
          Length = 395

 Score =  199 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 137/322 (42%), Gaps = 9/322 (2%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                    Y L+D N+G V+A   PD    PASLTK+MT+Y V   +K+ K      +T
Sbjct: 34  TPPQLNAQTYILMDYNSGAVLAAFNPDQRQYPASLTKMMTSYAVGDAMKQGKIHPNDQVT 93

Query: 82  I---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I   S   +    S         +++ +  + +IV S ND  VA+AE +  + ++FV  M
Sbjct: 94  IGESSWGKNFPGSSKMFLNLNQQVSVADLNRGVIVVSGNDACVALAEHVSGSTEQFVALM 153

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   +  GL  T+F   HG+     Y++ARDMA++  RI  D P+    +  K       
Sbjct: 154 NKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMALIGIRIIHDLPEEYKIYAEKDFTFNKI 213

Query: 199 KYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTRNKVS 256
           K PN N       +  DGMKTG T  +G+N+VASA    +  LI+V++G      R   S
Sbjct: 214 KQPNRNGLLWDKSMNVDGMKTGHTSQAGYNLVASATNANNMRLISVVMGVPTYKGREVES 273

Query: 257 ASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
             LL  GF +    K +        +  Y     +    + ++   T  +    + + + 
Sbjct: 274 KKLLQWGFNSFDTFKTLEAGKAVGEQPVYYGEDGDVAVGVLQDGFITVPKGRQADLKARM 333

Query: 313 AKDKESHFIDFEKITLLKNKIT 334
               +       K   +   I 
Sbjct: 334 EFTTKYLEAPLAKGQTVGKVIY 355


>gi|320175126|gb|EFW50238.1| D-alanyl-D-alanine carboxypeptidase [Shigella dysenteriae CDC
           74-1112]
 gi|320185393|gb|EFW60163.1| D-alanyl-D-alanine carboxypeptidase [Shigella flexneri CDC 796-83]
 gi|332097731|gb|EGJ02705.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella boydii 3594-74]
          Length = 403

 Score =  199 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + +++  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDMYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|309786587|ref|ZP_07681209.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella dysenteriae
           1617]
 gi|308925554|gb|EFP71039.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella dysenteriae
           1617]
          Length = 364

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 146/317 (46%), Gaps = 11/317 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               + L+D  +G V+AE   D   +PASLTK+MT+YVV   LK  K  LT  +T+ K+A
Sbjct: 2   DARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDA 61

Query: 87  SEYPPS------NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                           K G  +++ +  K +I++S ND  +A+A+ +  +++ F+  MN 
Sbjct: 62  WVTGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNG 121

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K LGL+ T F   HG+   G ++TARDMA+L   +  D P+     + K       + 
Sbjct: 122 YAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQ 181

Query: 201 PNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           PN N     + L  DGMKTG T  +G+N+VASA QGD  LI+V+LGA     R   S  L
Sbjct: 182 PNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKL 241

Query: 260 LSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           L+ GF        I      + +  +  + S       +    T       N +      
Sbjct: 242 LAWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGKAGSVTIPRGQLKNLKASYTLT 301

Query: 316 KESHFIDFEKITLLKNK 332
           +       +K  ++   
Sbjct: 302 EPQLTAPLKKGQVVGTI 318


>gi|167755687|ref|ZP_02427814.1| hypothetical protein CLORAM_01202 [Clostridium ramosum DSM 1402]
 gi|167704626|gb|EDS19205.1| hypothetical protein CLORAM_01202 [Clostridium ramosum DSM 1402]
          Length = 379

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 160/342 (46%), Gaps = 10/342 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L+ + +  L  I    ++            L++ N+  ++ +   +    PAS TK
Sbjct: 1   MKKLLITLLVVCLLPISRVQALDNDVTPNAKSAILIEANSRQILYDKNAEEKLYPASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  ++F  L+ KK      IT SK A+    S    + G +++L +  K + + SAND
Sbjct: 61  IMTMILMFEALRNKKISFDDEITTSKYAASMGGSQVYLEVGESLSLKDMFKSIAIASAND 120

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +  KFV+ MN+ +K LGL  THF NA G+    HYT A D+AI++  + 
Sbjct: 121 ASVAVAEHIAGSINKFVEMMNDKAKKLGLKNTHFKNATGLHDPDHYTCAHDLAIMAAYLI 180

Query: 179 TDFPQY------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
               +       ++   I+    +     NTN  +  + G DG+KTG+T  +G+ +V +A
Sbjct: 181 EIGGEDLFAVTSLYDSYIREDTKQSFWLVNTNKLLKLYNGVDGLKTGYTKEAGYCLVTTA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVP 290
            +  Q +I V++      TRN+   SLL  GF N           +I+      + N   
Sbjct: 241 QRDGQRIIGVLMKETAPKTRNEEMCSLLDYGFNNYKQVTIFKKDTLIEQHLVDKMDNLTI 300

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++  +      +  + + ++    + + +F+  ++  ++   
Sbjct: 301 DVKCKKDIVYTKAKSADAKVSTKVNYKENFLPVKQGDVIGTL 342


>gi|301168630|emb|CBW28220.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Haemophilus influenzae 10810]
          Length = 393

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 147/341 (43%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + + ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVTLSSFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|319896451|ref|YP_004134644.1| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5)
           [Haemophilus influenzae F3031]
 gi|317431953|emb|CBY80301.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Haemophilus influenzae F3031]
          Length = 393

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSRAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|326791361|ref|YP_004309182.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
 gi|326542125|gb|ADZ83984.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
          Length = 396

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 90/349 (25%), Positives = 154/349 (44%), Gaps = 17/349 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
            FL++I M                         Y L++ ++G ++ E   D P  PAS+T
Sbjct: 9   IFLLLIIMCCSQVFAAATPKKNTNQTLAATARSYILMEESSGKILLERNADEPLPPASIT 68

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  ++   +   K      +TIS++A+    S    + G   T+ + +K + + SAN
Sbjct: 69  KVMTLLLINEAVDTGKINWEDKVTISEHAAHMGGSQVFMEPGEEQTVRDLVKCICIASAN 128

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D AVA++E +  +E++FV+ MN  +  LG++ T F NA G+   GH +TARD+A++S  +
Sbjct: 129 DAAVAMSEYIAGSEEQFVELMNKRAAELGMTHTVFKNACGLHTEGHVSTARDIALMSRAL 188

Query: 178 KTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
               P+           I  +           NTN  +  + G  G+KTG+T  +   + 
Sbjct: 189 VNGHPEITKTLTTWMDTITHRTRRGESEFGLSNTNKMLKWYKGITGLKTGYTPEAKHCVS 248

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR--KKINYIIKDFYQQNLSN 287
           A+A + +  LIAVI+GA D  TR + +  LL  GF N   +    I  II +   +    
Sbjct: 249 ATATRDNMGLIAVIMGAADGKTRFQEAGQLLDYGFANYKVKVGPTIGTIIGEAPIKKGDV 308

Query: 288 EVPNISEEVCT--TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              N++ +        +    +    EA  +E       K  ++     
Sbjct: 309 SKINVATKETKAFVVPKSNTNSELTYEAHYREPLIAPISKGAIVGEMTY 357


>gi|58584548|ref|YP_198121.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
 gi|58418864|gb|AAW70879.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont strain
           TRS of Brugia malayi]
          Length = 370

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 84/334 (25%), Positives = 153/334 (45%), Gaps = 5/334 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++I + + +  F   S     K     +LD  +   I E+  D   +P+S++KLMT YV 
Sbjct: 7   LVILLLVSTLPFSSYSYQFRTKAKQAVVLDLASDLFIFEHNSDEKMSPSSMSKLMTLYVA 66

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F +LK     +     +S+ A E   S+   K+G ++++   L+ +   S ND  + +AE
Sbjct: 67  FDYLKAGIIDMKDKFRVSRKAWERKGSSMFLKEGQSVSVKELLEGVTTVSGNDACITLAE 126

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +E+ FV  MN  ++NL LS ++F+N+ G     H+ +A+D+ +L+ RI TDFP+Y 
Sbjct: 127 GIAGSEENFVVEMNEVAQNLNLSDSYFVNSSGWPDKDHFMSAKDLVVLAKRIFTDFPEYY 186

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             F  + L        N N  +   +G DG+KTG+T A G+ IV SA + D+ + AV+ G
Sbjct: 187 DLFSKQYLTYNDIIQKNKNLLLFHDIGVDGLKTGYTNAGGYGIVISAKRNDRRIFAVVNG 246

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY----QQNLSNEVPNISEEVCTTQK 301
                 R + +  L+   F +   +K                        ++ +V  T  
Sbjct: 247 LNTEKERIEEAKRLIQYSFNHFNTKKIFAKDSVVEEINVLYGKERKVSATVANDVTITYN 306

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +    +++  + K+      +K   +     +
Sbjct: 307 RNLRDKIKVRV-EYKDMIPAPIKKGQEVGKIFIE 339


>gi|320015830|gb|ADV99401.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 401

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 148/323 (45%), Gaps = 11/323 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 33  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 92

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 93  TVGKDAWATGNPALRGSSLMFLKPGDRVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 153 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 212

Query: 195 IKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +  N N  +       DGMKTG+T   G+N+VASA  G   LI+V+LGA     R 
Sbjct: 213 FNKIRQTNRNRLLWNSSLNVDGMKTGYTNGVGYNLVASATDGPMRLISVVLGAPSDKVRF 272

Query: 254 KVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF        I        +  +  + S     ++E+   T  +    N +
Sbjct: 273 SESEKLLTWGFRFYETVVPIKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLK 332

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                ++        K  ++   
Sbjct: 333 ASYTLNQTELRAPLAKHQVVGTI 355


>gi|297544605|ref|YP_003676907.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296842380|gb|ADH60896.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 382

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 140/349 (40%), Gaps = 23/349 (6%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++F   L I+   M S      S   +       ++D  TG V+ E         AS T
Sbjct: 1   MKKFVFYLFILLYFMSSVKVYANSDYPSIFAKSAIVIDQETGRVLYEKNSHEKLPMASTT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  V           L   +T+SK A+    S+     G  + +++ L  L++ S N
Sbjct: 61  KIMTLLVALEK-----GNLKDIVTVSKRAASVGGSSIWLSPGEKIDMESLLYGLMLNSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSW 175
           D A AIAE +  + + F + MN  +K +G   THF    G+      HYTTA D+A+++ 
Sbjct: 116 DAATAIAEHIGGSVENFAKIMNEKAKEIGAYDTHFATPSGLDIGIDDHYTTAYDLALITR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V
Sbjct: 176 Y-AFRYPKFAEIVSTKEKTIPWEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLV 234

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLS 286
           +SA +  +  IAV+L +       + S  +L   F      + +     I K   +    
Sbjct: 235 SSATREGRRFIAVVLNSP---PMWEDSIKILDYAFSKYKPYRVLKREELIKKIEVKGGKE 291

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           N +  +SE  C              E    ES     EK   +     K
Sbjct: 292 NSISVVSETECIIPASEEEKQKVSLEFHLPESVEAPIEKGERIGYVTVK 340


>gi|186894765|ref|YP_001871877.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Yersinia
           pseudotuberculosis PB1/+]
 gi|186697791|gb|ACC88420.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Yersinia
           pseudotuberculosis PB1/+]
          Length = 401

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 33  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 92

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 93  TVGKDAWATGNPALRGSSLMFLKPGDQVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 153 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 212

Query: 195 IKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +  N N  +       DGMKTG+T  +G+N+VASA  G   LI+V+LGA     R 
Sbjct: 213 FNKIRQTNRNRLLWNSSLNVDGMKTGYTNGAGYNLVASATDGPMRLISVVLGAPSDKVRF 272

Query: 254 KVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF        I        +  +  + S     ++E+   T  +    N +
Sbjct: 273 SESEKLLTWGFRFYETVVPIKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLK 332

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                ++        K  ++   
Sbjct: 333 ASYTLNQTELRAPLAKHQVVGTI 355


>gi|153947077|ref|YP_001401624.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pseudotuberculosis IP
           31758]
 gi|152958572|gb|ABS46033.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pseudotuberculosis IP
           31758]
          Length = 400

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 32  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 91

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 92  TVGKDAWATGNPALRGSSLMFLKPGDQVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 151

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 152 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 211

Query: 195 IKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +  N N  +       DGMKTG+T  +G+N+VASA  G   LI+V+LGA     R 
Sbjct: 212 FNKIRQTNRNRLLWNSSLNVDGMKTGYTNGAGYNLVASATDGPMRLISVVLGAPSDKVRF 271

Query: 254 KVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF        I        +  +  + S     ++E+   T  +    N +
Sbjct: 272 SESEKLLTWGFRFYETVVPIKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLK 331

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                ++        K  ++   
Sbjct: 332 ASYTLNQTELRAPLAKHQVVGTI 354


>gi|51595692|ref|YP_069883.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108812820|ref|YP_648587.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Nepal516]
 gi|145599648|ref|YP_001163724.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Pestoides F]
 gi|162419917|ref|YP_001606057.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Angola]
 gi|165936271|ref|ZP_02224840.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|167468020|ref|ZP_02332724.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis FV-1]
 gi|170024965|ref|YP_001721470.1| Serine-type D-Ala-D-Ala carboxypeptidase [Yersinia
           pseudotuberculosis YPIII]
 gi|229841277|ref|ZP_04461436.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843380|ref|ZP_04463526.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229895754|ref|ZP_04510924.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Pestoides A]
 gi|229903242|ref|ZP_04518355.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Nepal516]
 gi|51588974|emb|CAH20591.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108776468|gb|ABG18987.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Yersinia pestis Nepal516]
 gi|145211344|gb|ABP40751.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Pestoides F]
 gi|162352732|gb|ABX86680.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Angola]
 gi|165915885|gb|EDR34493.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|169751499|gb|ACA69017.1| Serine-type D-Ala-D-Ala carboxypeptidase [Yersinia
           pseudotuberculosis YPIII]
 gi|229679012|gb|EEO75115.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Nepal516]
 gi|229689727|gb|EEO81788.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697643|gb|EEO87690.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700677|gb|EEO88706.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Pestoides A]
          Length = 401

 Score =  199 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 11/323 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 33  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 92

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 93  TVGKDAWATGNPALRGSSLMFLKPGDRVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 153 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 212

Query: 195 IKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +  N N  +       DGMKTG+T  +G+N+VASA  G   LI+V+LGA     R 
Sbjct: 213 FNKIRQTNRNRLLWNSSLNVDGMKTGYTNGAGYNLVASATDGPMRLISVVLGAPSDKVRF 272

Query: 254 KVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL+ GF        I        +  +  + S     ++E+   T  +    N +
Sbjct: 273 SESEKLLTWGFRFYETVVPIKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLK 332

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
                ++        K  ++   
Sbjct: 333 ASYTLNQTELRAPLAKHQVVGTI 355


>gi|316934064|ref|YP_004109046.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris DX-1]
 gi|315601778|gb|ADU44313.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris DX-1]
          Length = 413

 Score =  199 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 87/350 (24%), Positives = 137/350 (39%), Gaps = 20/350 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------------AETNKLPYYTLLDTNTGHVIAENYPD 48
           M + L+   +A+     P  +                 + P   LLD  +G V+ E   D
Sbjct: 14  MMRGLLAGLIAVALGAGPATAANQSVQGAKKEEGGFEAQAPTAILLDAESGSVLFEKNAD 73

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMT 103
               P+S+ KLMT  VVF  LK     L     +S+N+  Y       S    +  S+++
Sbjct: 74  ELRAPSSMMKLMTVEVVFHLLKTGALQLAQEYRVSENSWRYGGAPAGGSTMFAEIHSSIS 133

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +DN L+  I++S ND  + +AE +  +E  FV+ M   ++ LGL+ + F N+ G+    +
Sbjct: 134 VDNLLRGAIIQSGNDSCMVLAEGIAGSEAAFVERMTKRARELGLTQSTFGNSTGLPNPDN 193

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
             + R++A L+  I   +P     F  K       +  N N  +    GADG KTGFT  
Sbjct: 194 KMSVRELARLARHIILTYPDMYALFGEKEFTWNKIRQTNRNPLLNALPGADGFKTGFTKE 253

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ- 282
            G+ +V SA+Q    LI V+ G    + R   +  LL  GF N   R          Y  
Sbjct: 254 GGYGLVGSAVQNGMRLIVVVNGLESADDRASEAKKLLEWGFRNFESRSLFASDATVGYAR 313

Query: 283 --QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                   VP    E           +  +     +       E    + 
Sbjct: 314 VFGGDKRYVPLTPAEPVRVMVRRNGSDKLLARIVYQGPVPAPVEGGQRIG 363


>gi|315633663|ref|ZP_07888953.1| D-alanyl-D-alanine carboxypeptidase DacA [Aggregatibacter segnis
           ATCC 33393]
 gi|315477705|gb|EFU68447.1| D-alanyl-D-alanine carboxypeptidase DacA [Aggregatibacter segnis
           ATCC 33393]
          Length = 399

 Score =  199 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 94/347 (27%), Positives = 147/347 (42%), Gaps = 13/347 (3%)

Query: 2   RQFLVIIAMAMLSNIFP----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +  L+  A+    +       F           Y L+D N+G V+    PD    PASLT
Sbjct: 14  KIALIAGALCASFSAVADDIQFNIAVPEINAQTYILMDYNSGTVLVALNPDQRQYPASLT 73

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVK 114
           K+MT+YV    LK+ K   T  +TI ++A        S         +++ +  + +++ 
Sbjct: 74  KMMTSYVTGQALKQGKIHDTDVVTIGESAWGQNFPGSSKMFLNLNQQVSVADLNRGIVIV 133

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  VA+AE +  T   FV  MN   +  GL  THF   HG+     Y++ARDMAI+ 
Sbjct: 134 SGNDACVAMAEHVSGTVTNFVATMNKYVEQFGLKNTHFTTVHGLDDENQYSSARDMAIIG 193

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAI 233
             I  D P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA 
Sbjct: 194 AHIIRDLPEEYKIYAEKDFTFNKIKQPNRNGLLWDKTIHVDGMKTGHTDKAGYNLVASAT 253

Query: 234 Q-GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNE 288
              +  LI+V++G      R   S  LL  GF N    K          +  Y  + SN 
Sbjct: 254 NPNNMRLISVVMGVPTYKGREVESKKLLQWGFANFETFKTFEAGKAISEQRVYYGDESNI 313

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              + ++   T  +  +   + +   +K+       K  ++   + +
Sbjct: 314 QLGVLQDAFITIPKGKSSELKARYELEKKYLEAPLAKGQVVGKVVYQ 360


>gi|121608233|ref|YP_996040.1| Serine-type D-Ala-D-Ala carboxypeptidase [Verminephrobacter
           eiseniae EF01-2]
 gi|121552873|gb|ABM57022.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Verminephrobacter eiseniae EF01-2]
          Length = 402

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 97/352 (27%), Positives = 157/352 (44%), Gaps = 21/352 (5%)

Query: 1   MRQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L ++    +                         Y LLD     V+A    D P  
Sbjct: 14  MKRILSVLRPLAILAALAPAAFGAHAQAPQPPEIAARAYILLDVTANQVLAAKNIDAPVE 73

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            ASLTKLMTAY+VF  L+ +K  L   + +S+ A + P S         + +++ LK +I
Sbjct: 74  QASLTKLMTAYLVFDALRAEKISLQQNLPVSERAWKMPGSRMFIDPTMQVPVEDLLKGMI 133

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND A+A+AE +  T + FV+ MN  +K LG+ +T + N  G+ + GH +TARD+ +
Sbjct: 134 VQSGNDAAMALAEGVGATAENFVKLMNEQAKALGMQSTSYKNPEGLTEPGHLSTARDLGL 193

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIV 229
           L+ R+  DFPQ+MHY+  K     G    N N            DG+KTG T A+G+ +V
Sbjct: 194 LATRLMKDFPQHMHYYATKQYSYPGTPASNANNRNTLLYRDPTVDGLKTGHTAAAGYCLV 253

Query: 230 ASAIQ-----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDF 280
           A+A +     G + L++++LGA   + R   S  LL+ G+      K  +          
Sbjct: 254 ATAKREFPGLGQRRLLSIMLGAASESARANESQKLLNWGYTAFEAVKLFDAGQPVATPAV 313

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++   S       E +  T           + A+  +     + K   +   
Sbjct: 314 WKGRTSQLKIGHEEAIVMTVPAGSTGRITTRIAR-PDPLVAPYTKGQSIGTL 364


>gi|237734435|ref|ZP_04564916.1| D-alanyl-D-alanine carboxypeptidase [Mollicutes bacterium D7]
 gi|229382665|gb|EEO32756.1| D-alanyl-D-alanine carboxypeptidase [Coprobacillus sp. D7]
          Length = 390

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 160/342 (46%), Gaps = 10/342 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L+ + +  L  I    ++            L++ N+  ++ +   +    PAS TK
Sbjct: 12  MKKLLITLLVVCLLPISRVQALDNDVTPNAKSAILIEANSRQILYDKNAEEKLYPASTTK 71

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  ++F  L+ KK      IT SK A+    S    + G +++L +  K + + SAND
Sbjct: 72  IMTMILMFEALRNKKISFDDEITTSKYAASMGGSQVYLEVGESLSLKDMFKSIAIASAND 131

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            +VA+AE +  +  KFV+ MN+ +K LGL  THF NA G+    HYT A D+AI++  + 
Sbjct: 132 ASVAVAEHIAGSINKFVEMMNDKAKKLGLKNTHFKNATGLHDPDHYTCAHDLAIMAAYLI 191

Query: 179 TDFPQY------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
               +       ++   I+    +     NTN  +  + G DG+KTG+T  +G+ +V +A
Sbjct: 192 EIGGEDLFAVTSLYDSYIREDTKQSFWLVNTNKLLKLYNGVDGLKTGYTKEAGYCLVTTA 251

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVP 290
            +  Q +I V++      TRN+   SLL  GF N           +I+      + N   
Sbjct: 252 QRDGQRIIGVLMKETAPKTRNEEMCSLLDYGFNNYKQVTIFKKDTLIEQHLVDKMDNLTI 311

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++  +      +  + + ++    + + +F+  ++  ++   
Sbjct: 312 DVKCKKDIVYTKAKSADAKVSTKVNYKENFLPVKQGDVIGTL 353


>gi|16272004|ref|NP_438202.1| penicillin-binding protein 5 [Haemophilus influenzae Rd KW20]
 gi|260580667|ref|ZP_05848494.1| D-alanyl-D-alanine carboxypeptidase dacA [Haemophilus influenzae
           RdAW]
 gi|1169208|sp|P44466|DACA_HAEIN RecName: Full=D-alanyl-D-alanine carboxypeptidase dacA;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 5; Short=PBP-5; Flags:
           Precursor
 gi|1572974|gb|AAC21707.1| penicillin-binding protein 5 (dacA) [Haemophilus influenzae Rd
           KW20]
 gi|260092729|gb|EEW76665.1| D-alanyl-D-alanine carboxypeptidase dacA [Haemophilus influenzae
           RdAW]
          Length = 393

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKNFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLVKGQVIGKVVYQ 354


>gi|304397386|ref|ZP_07379264.1| Beta-lactamase [Pantoea sp. aB]
 gi|304355004|gb|EFM19373.1| Beta-lactamase [Pantoea sp. aB]
          Length = 387

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 148/350 (42%), Gaps = 18/350 (5%)

Query: 1   MRQFLVIIAMAMLSNIF-------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++ L+    A L           PF           + L+D  TG V+    PD   NP
Sbjct: 1   MKRRLLFTVTATLFWASLAQADAIPFPVTPPAIDAASWVLMDATTGQVLTAGNPDERRNP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNA 107
           ASLTKLMT YVV   + +KK      +T+ K+A                K G  +++ + 
Sbjct: 61  ASLTKLMTGYVVDRAIDQKKISRDDMVTVGKDAWGAGNPVFKGSSLMFLKPGDKLSVRDL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            + +I+ S ND  VA+A+ +  +E  FV  MN+  + LGL  THF   HG+   G +++A
Sbjct: 121 SRGVIIDSGNDACVALADYVAGSEANFVGMMNHYVEKLGLQNTHFETVHGLDAPGQFSSA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGF 226
            DMA LS  I    P +   +  K L   G    N N       L  DG+KTG T  +GF
Sbjct: 181 LDMAKLSRAIIDGEPDFYAMYSEKTLTWNGITQNNRNGLLWDNNLHVDGLKTGHTETAGF 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQ 282
           NI+AS + G   LIAV++G      R + +  LL  G       +  +   K    + + 
Sbjct: 241 NIIASNVVGKHRLIAVVMGGKSSKGREEQARKLLVWGQNTFDTVQLFHAGKKIGTENVWY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            N        +E+V  +       N + K   +++      +   ++   
Sbjct: 301 GNPHQVDVGTAEDVYLSLPRSEVQNVKAKYVINRKDLEAPLKANEVVGEI 350


>gi|53718048|ref|YP_107034.1| penicillin-binding protein 6 [Burkholderia pseudomallei K96243]
 gi|52208462|emb|CAH34396.1| penicillin-binding protein 6 [Burkholderia pseudomallei K96243]
          Length = 403

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 84/331 (25%), Positives = 148/331 (44%), Gaps = 15/331 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK 
Sbjct: 33  TYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKKI 92

Query: 75  MLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +   +T S+         S    +    +++ + +  +I++S ND A+A+AE +  +E 
Sbjct: 93  TMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEA 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  ++ LG+  THF + +G+    HYTTA D+A LS  +  D+P Y + F +K 
Sbjct: 153 QFVNMMNAEAQRLGMKNTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKE 212

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILG 245
                 K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++G
Sbjct: 213 FTYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMG 272

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTT 299
               + R + S  +L+ G+      +             Y+   +N    + ++  +   
Sbjct: 273 ETKESDRVQDSMKMLNYGYTAFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITVP 332

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +        ++       +   D + +  +K
Sbjct: 333 RGLADKVKPEVALNAPLIAPLADGQVVGSVK 363


>gi|213583748|ref|ZP_03365574.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 401

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 141/347 (40%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 13  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 72

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 73  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 132

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 133 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 192

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 193 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 252

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N 
Sbjct: 253 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNT 312

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 313 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 359


>gi|114570005|ref|YP_756685.1| Serine-type D-Ala-D-Ala carboxypeptidase [Maricaulis maris MCS10]
 gi|114340467|gb|ABI65747.1| Serine-type D-Ala-D-Ala carboxypeptidase [Maricaulis maris MCS10]
          Length = 381

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 71/345 (20%), Positives = 139/345 (40%), Gaps = 10/345 (2%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR +  + + ++ +                +  +LD  TG V+     D    PAS++K+
Sbjct: 1   MRVYPAIALLLSFVICTPGLAQTTYQTDASHAVILDAETGEVLFSRNADEAMPPASMSKM 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVK 114
           MT  ++   ++     L   + +S+ A          S    +  S   +D+ L+ +I++
Sbjct: 61  MTVLMLIEAIEAGSLSLDDELPVSEYAWRTGGAASGSSTMFLEVNSRARVDDLLRGIIIQ 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND  + +AE++  +E  F   M + +  LGL++  F N+ G     H  +A D+A L+
Sbjct: 121 SGNDACIVVAEAIGGSEAAFADMMTDRAHELGLTSASFANSTGWPHPDHRISALDLARLA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  D P Y   +  +     G +  N N  +G F GADG+KTG T  SG+ +V SA +
Sbjct: 181 RILIEDHPDYYDIWSEREFTYNGIRQYNRNPLLGVFSGADGLKTGHTEESGYGLVGSAER 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-DFYQQNLSNEVPNIS 293
             +  I V  G    N R   +  ++     + +  +        D   +    E P ++
Sbjct: 241 DGERRIIVFNGMSSNNDRATEAERMMRSALSDYSLYRLFEAGDPVDHQAEVFMGEAPTVA 300

Query: 294 EEVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLKNKITK 335
             V +     ++   +   +             ++  ++     +
Sbjct: 301 LRVSSDVTAGLHRRARRDLSVSVSYDGPLVAPVQEGDVVGTLTVE 345


>gi|296103671|ref|YP_003613817.1| D-alanyl-D-alanine carboxypeptidase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058130|gb|ADF62868.1| D-alanyl-D-alanine carboxypeptidase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 388

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 14/328 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
              F       +   + L+D  TG ++         NPASLTKLMT YVV   +   +  
Sbjct: 24  PLDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRIS 83

Query: 76  LTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
               +T+ ++A                K+G  +++ +  + LIV S ND  VA+A+ +  
Sbjct: 84  PDDIVTVGRDAWAKGNPVFDGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADHVAG 143

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
            + +FV+ MN+  + L L  THF   HG+   G +++A D+A+LS  I    P++ H + 
Sbjct: 144 GQPQFVKMMNDYVQKLNLRDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYS 203

Query: 190 IKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            K L   G    N N       +  DG+KTG T  +GFN++AS + G + LIAV++GA  
Sbjct: 204 EKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASTVDGQRRLIAVVMGADS 263

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEII 304
              R   +  LL  G  N    + ++   K      +  +         ++      +  
Sbjct: 264 PKGREDQARKLLHWGQQNFDTVQILHNGKKVGTERIWYGDKEQVNLGTDQDFWLALPKAE 323

Query: 305 NYNTQMKE---AKDKESHFIDFEKITLL 329
             N + K     K+ E+     +++  +
Sbjct: 324 VPNIKAKYVLDTKELEAPIAAHQRVGEI 351


>gi|145629114|ref|ZP_01784913.1| hypothetical protein CGSHi22121_09940 [Haemophilus influenzae
           22.1-21]
 gi|144978617|gb|EDJ88340.1| hypothetical protein CGSHi22121_09940 [Haemophilus influenzae
           22.1-21]
          Length = 393

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + + ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSSFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKNFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLVKGQVIGKVVYQ 354


>gi|28875449|gb|AAO59939.1| DacD [uncultured bacterium]
          Length = 421

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMAMLSN-------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++  +S           F           + L+D  TG ++         NPA
Sbjct: 36  RRLFIAASLLTMSFSPAWASDAVSFAPQPPAITAGAWVLMDYTTGQILTAGNEHQQRNPA 95

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +  K+   T  +T+ ++A                K+G  +++ +  
Sbjct: 96  SLTKLMTGYVVDRAIDSKRISPTDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 155

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MNN ++ L L  THF   HG+   G +++A 
Sbjct: 156 RGLIVDSGNDACVALADYIAGGQPQFVAMMNNYAQKLNLQDTHFETVHGLDAPGQHSSAY 215

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P + H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 216 DLAVLSRAIIHGEPDFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFN 275

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQ 283
           ++ASA+ G + LIAV++GA     R   +  LL  G +N    + +    +      +  
Sbjct: 276 LIASAVDGQRRLIAVVMGAESAKGREDQARKLLQWGQHNFDTVQVLRSGKQVGTERIWYG 335

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +         ++      +    N + K   DK+           +   
Sbjct: 336 DKEKISLGTEQDFWMALPKAEVPNIKAKYVLDKKELVAPIAAHQRVGEI 384


>gi|253990639|ref|YP_003041995.1| D-alanyl-D-alanine carboxypeptidase fraction A [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782089|emb|CAQ85253.1| penicillin-binding protein 5 precursor [Photorhabdus asymbiotica]
          Length = 428

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 89/352 (25%), Positives = 151/352 (42%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           ++   + IA+AM  + F           +          Y L+D N+G V+AE   D   
Sbjct: 35  IKSVTLGIALAMNVSAFANGNDVNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADSHR 94

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K      +T+  +A                K G  +++ 
Sbjct: 95  DPASLTKMMTSYVIGQAIKSGKIGPNDMVTVGTDAWATGNPVFKGSSLMFLKPGDQVSVS 154

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              + + ++S ND  VA+A+ +  +++ FV  MN   K+LGL  T+F   HG+   G Y+
Sbjct: 155 MLSRGINLQSGNDACVAMADYVAGSQESFVNLMNGYVKSLGLQNTNFKTVHGLDAEGQYS 214

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           +ARDMA++   +  D P+    ++ K       +  N N       L  DG+KTG T A+
Sbjct: 215 SARDMALIGQALIRDVPEEYAIYKEKEFTYNNIRQTNRNGLLWDKSLNVDGIKTGHTNAA 274

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +GD  LI+ +LG      R   S  LL+ GF        +        +  
Sbjct: 275 GYNLVASATEGDMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKADKEFASEPV 334

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + ++V  T       + +     +         K  ++   
Sbjct: 335 WFGDSDRVQLGVDKDVYLTIPRGRLKDLKASYVMNDTELHAPLAKNQVVGTI 386


>gi|167462561|ref|ZP_02327650.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322381758|ref|ZP_08055712.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321154146|gb|EFX46468.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 392

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 82/318 (25%), Positives = 135/318 (42%), Gaps = 8/318 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 LLD +TG +I+E   D    PAS+TK+MT  ++   + +    +   +  S+ A
Sbjct: 39  NAKSAILLDADTGTIISEKDKDAKLPPASITKIMTMLLIMEAVDKGTLKMDEKVRTSEYA 98

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    + G  MT++  LK + + S ND +VA+AE +  TE+ FV+ MN  +K LG
Sbjct: 99  ASMGGSQIFLEPGEEMTVEEMLKGIAMASGNDASVAMAEKIAGTEEDFVRMMNERAKQLG 158

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPN 202
           +  THF N +G+    HY+TA D+A++S  +            +   ++    K     N
Sbjct: 159 MKNTHFANCNGLPAENHYSTAYDIALMSRELLKHEKITAFTGAYQDYLRKDSEKPFWLVN 218

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  V  + GADG+KTGFT    F + A+A + +  +IAV++G  D  TRN     L   
Sbjct: 219 TNKLVRFYNGADGLKTGFTSEEKFCLAATAKRDNLRMIAVVMGEPDTKTRNAEVTKLFDY 278

Query: 263 GFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
            F   T+        +       +  +               K+         E +    
Sbjct: 279 SFSQYTNYPIFKAGDQIGSFRVGKGKVQEVPLIAKHPYGVLLKKSEGKEGIRHEVQILPD 338

Query: 319 HFIDFEKITLLKNKITKK 336
                +    +   +  K
Sbjct: 339 LKAPVQAGEPIGKLVVYK 356


>gi|51595441|ref|YP_069632.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           pseudotuberculosis IP 32953]
 gi|153946853|ref|YP_001401914.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           pseudotuberculosis IP 31758]
 gi|51588723|emb|CAH20334.1| putative penicillin-binding protein 5 [Yersinia pseudotuberculosis
           IP 32953]
 gi|152958348|gb|ABS45809.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pseudotuberculosis IP
           31758]
          Length = 400

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 29  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADTRRNPASLTKMMTSYVIGQAIKSGK 88

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 89  IGADDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 148

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 149 AGSQDSFVNLMNNYVKALGLQNTHFKTVHGLDAEGQFSSARDMALIGQALIRDVPDEYAI 208

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+V+LG 
Sbjct: 209 YKEKEFTFNNIRQTNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISVVLGG 268

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++   T   
Sbjct: 269 HTFKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDAYLTIPR 328

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++   
Sbjct: 329 GRMKDLKASYVLNTPEIHAPLAKNQVVGTI 358


>gi|187731390|ref|YP_001879357.1| D-alanyl-D-alanine carboxypeptidase fraction A [Shigella boydii CDC
           3083-94]
 gi|187428382|gb|ACD07656.1| serine-type D-Ala-D-Ala carboxypeptidase [Shigella boydii CDC
           3083-94]
          Length = 403

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/352 (23%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPSVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQTMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDF 280
           G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +       + +++  T       + +     +        +K  ++   
Sbjct: 310 WFGDSDRASLGVDKDMYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 361


>gi|16764014|ref|NP_459629.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|62179236|ref|YP_215653.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161615147|ref|YP_001589112.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550827|ref|ZP_02344583.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167990643|ref|ZP_02571743.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231649|ref|ZP_02656707.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236628|ref|ZP_02661686.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168240484|ref|ZP_02665416.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168264432|ref|ZP_02686405.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465811|ref|ZP_02699693.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168823261|ref|ZP_02835261.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194442745|ref|YP_002039879.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194448720|ref|YP_002044671.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194471751|ref|ZP_03077735.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194736722|ref|YP_002113755.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197250303|ref|YP_002145612.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|198245247|ref|YP_002214626.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389790|ref|ZP_03216401.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204930599|ref|ZP_03221529.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205351925|ref|YP_002225726.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|207856103|ref|YP_002242754.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224582473|ref|YP_002636271.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238911587|ref|ZP_04655424.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|16419149|gb|AAL19588.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|62126869|gb|AAX64572.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364511|gb|ABX68279.1| hypothetical protein SPAB_02915 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401408|gb|ACF61630.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407024|gb|ACF67243.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194458115|gb|EDX46954.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194712224|gb|ACF91445.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195631937|gb|EDX50457.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197214006|gb|ACH51403.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197290404|gb|EDY29760.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197939763|gb|ACH77096.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199602235|gb|EDZ00781.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204320533|gb|EDZ05736.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205271706|emb|CAR36537.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205324158|gb|EDZ11997.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205331044|gb|EDZ17808.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334030|gb|EDZ20794.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339760|gb|EDZ26524.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205340474|gb|EDZ27238.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347141|gb|EDZ33772.1| serine-type D-Ala-D-Ala carboxypeptidase [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206707906|emb|CAR32194.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467000|gb|ACN44830.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245910|emb|CBG23711.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992371|gb|ACY87256.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157238|emb|CBW16725.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911668|dbj|BAJ35642.1| D-alanyl-D-alanine carboxypeptidase DacA [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320084907|emb|CBY94697.1| D-alanyl-D-alanine carboxypeptidase, fraction A [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226217|gb|EFX51268.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322613231|gb|EFY10174.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322621299|gb|EFY18156.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623719|gb|EFY20557.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628991|gb|EFY25770.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631713|gb|EFY28467.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637551|gb|EFY34253.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641891|gb|EFY38521.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646735|gb|EFY43241.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651436|gb|EFY47816.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653113|gb|EFY49447.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658833|gb|EFY55088.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664897|gb|EFY61090.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322668899|gb|EFY65051.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670595|gb|EFY66728.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675336|gb|EFY71412.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682193|gb|EFY78218.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684977|gb|EFY80974.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322713701|gb|EFZ05272.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323128954|gb|ADX16384.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323193964|gb|EFZ79166.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197944|gb|EFZ83066.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202009|gb|EFZ87069.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207142|gb|EFZ92095.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210407|gb|EFZ95298.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214331|gb|EFZ99082.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221482|gb|EGA05896.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323231084|gb|EGA15200.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323234084|gb|EGA18173.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238221|gb|EGA22279.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242545|gb|EGA26569.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248478|gb|EGA32412.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323259234|gb|EGA42877.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261642|gb|EGA45217.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264824|gb|EGA48325.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272339|gb|EGA55746.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326622381|gb|EGE28726.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326626964|gb|EGE33307.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
 gi|332987582|gb|AEF06565.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 403

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/347 (24%), Positives = 142/347 (40%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +  A +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCAAFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 135 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 194

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 195 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 254

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N 
Sbjct: 255 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNT 314

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 315 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 361


>gi|145639682|ref|ZP_01795285.1| hypothetical protein CGSHiII_09201 [Haemophilus influenzae PittII]
 gi|145271239|gb|EDK11153.1| hypothetical protein CGSHiII_09201 [Haemophilus influenzae PittII]
 gi|309750652|gb|ADO80636.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Haemophilus influenzae R2866]
          Length = 393

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKNFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLVKGQVIGKVVYQ 354


>gi|165925339|ref|ZP_02221171.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166212479|ref|ZP_02238514.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167422579|ref|ZP_02314332.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|165922946|gb|EDR40097.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166206410|gb|EDR50890.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166958593|gb|EDR55614.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
          Length = 380

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 9   VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADTRRNPASLTKMMTSYVIGQAIKSGK 68

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 69  IGAEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 128

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 129 AGSQDSFVNLMNNYVKALGLQNTHFKTVHGLDAEGQFSSARDMALIGQALIRDVPDEYAI 188

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+V+LG 
Sbjct: 189 YKEKEFTFNNIRQTNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISVVLGG 248

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++   T   
Sbjct: 249 HTFKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDAYLTIPR 308

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++   
Sbjct: 309 GRMKDLKASYVLNTPEIHAPLAKNQVVGTI 338


>gi|238757942|ref|ZP_04619124.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia aldovae ATCC
           35236]
 gi|238703927|gb|EEP96462.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia aldovae ATCC
           35236]
          Length = 397

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 147/324 (45%), Gaps = 11/324 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A       Y L+D N+G ++AE   D   +PASLTK+M++YV+   LK  K      
Sbjct: 32  APTAPPVDAKAYVLMDYNSGKILAEGNSDQRLDPASLTKIMSSYVIGQALKAGKVHPDDL 91

Query: 80  ITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           +T+ K+A                K G  + L +  K ++++S ND ++A+A+ +  ++  
Sbjct: 92  VTVGKDAWATGNPALRGSSLMFLKPGDQVRLSDLNKGIVIQSGNDASIALADYIAGSQDS 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MNN +K LGL+ THFM  HG+   G Y+TARDMA+L   +  D P      + K  
Sbjct: 152 FVGLMNNYAKALGLANTHFMTVHGLDAPGQYSTARDMAVLGQALIRDVPDEYALHKEKEF 211

Query: 194 EIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                +  N N     T L  DGMKTGFT  +G N+VASA  G   LI+V+LGA     R
Sbjct: 212 TFNKIRQINRNRLLWSTNLNVDGMKTGFTTGAGHNLVASATDGPMRLISVVLGAPSDRIR 271

Query: 253 NKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              S  LL+ GF        I      I +  +  +       ++E+   T  +    N 
Sbjct: 272 FNESEKLLTWGFRFYETVVPIKTTKPFITQKVWLGDTGQVDLGVAEDAAITIPKGQMKNL 331

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
           +     D+        K  ++   
Sbjct: 332 KASYKLDQAELRAPLAKHQVVGTI 355


>gi|147677612|ref|YP_001211827.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
 gi|146273709|dbj|BAF59458.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
          Length = 381

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/318 (26%), Positives = 140/318 (44%), Gaps = 15/318 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A         L+D  TG ++ E        PAS TK+MTA +           L   +T+
Sbjct: 37  AFFITADAAVLMDARTGQILYEKNARQKRPPASTTKIMTALLALE-----GGDLQQIVTV 91

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S NA+    ++   + G  +TL+  +   +++S ND  VAIAE +  TE+ FV  MN  +
Sbjct: 92  SPNAASTGEASLDLRPGEKLTLEELIYGAMLESGNDACVAIAEHISGTEENFVLLMNQKA 151

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP- 201
           K +G   T F N++G+   GH TTARD+A+++     +   +      +G  + G+K   
Sbjct: 152 KMIGAEDTSFKNSNGLPAAGHCTTARDLAVITRYALRN-DIFRKVVSTRGRAVGGEKCRY 210

Query: 202 --NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             NTN  + ++  ADG+KTG T  +G  +VASA +  + LI+V+L + D   R   S  L
Sbjct: 211 LSNTNRLLWSYAWADGVKTGTTGEAGNCLVASATKDGRQLISVVLHSDD---RWLDSVKL 267

Query: 260 LSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           +  GF N    + +       +   ++    EV  ++                 K  + K
Sbjct: 268 MEFGFENFNLVQAVGRGEPIARVTVKEGTEKEVKAVAGAGIDAVVPKNGRERPEKAVEIK 327

Query: 317 ESHFIDFEKITLLKNKIT 334
           +      +K   L     
Sbjct: 328 KDVIAPVQKGQYLGRVTI 345


>gi|114561878|ref|YP_749391.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella frigidimarina
           NCIMB 400]
 gi|114333171|gb|ABI70553.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella frigidimarina
           NCIMB 400]
          Length = 403

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/318 (28%), Positives = 141/318 (44%), Gaps = 10/318 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A +     Y L+D N+G VIAE       NPASLTK+MT+YV+   ++     L   
Sbjct: 42  TPDAPSVAAKAYVLMDYNSGRVIAEENAYESLNPASLTKMMTSYVIGHEIRVGNISLDDD 101

Query: 80  ITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           + I+KNA        S    + G T+ + +  + +I++S ND  VA+AE +  TE  FV 
Sbjct: 102 VAITKNAWAKNFPDSSKMFIEVGKTVKVHDLNRGIIIQSGNDACVAMAEHIAGTEGAFVD 161

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN+ +K LG+  ++F N+HG+    H TTA DMAIL   +  D P+    +  K     
Sbjct: 162 LMNSWAKQLGMKDSYFENSHGLDSENHKTTAYDMAILGAALIRDVPEEYKVYSEKSFTYN 221

Query: 197 GKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           G K  N N       L  DG+KTG T  +G+N+V+S       LI+V++G    + R   
Sbjct: 222 GIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYNLVSSGTSEGMRLISVVMGTSSESARKAE 281

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI------SEEVCTTQKEIINYNTQ 309
           S  LL+ GF                 QQ    +   +         +  ++ +  +    
Sbjct: 282 SKKLLNYGFRFFETITPYKAGDTFVTQQIWYGDRETVDLGVMTDTPITISRGKAKDLQAN 341

Query: 310 MKEAKDKESHFIDFEKIT 327
            +  K   +     E + 
Sbjct: 342 FELTKPLTAPLAKGETVG 359


>gi|170747925|ref|YP_001754185.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654447|gb|ACB23502.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 429

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 8/316 (2%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
           P+  L+D ++G V+ E   D  ++PAS+ KLMT  +VF  LK  +  + T  T++++A +
Sbjct: 45  PHAILIDADSGSVLFEKAADERFSPASMAKLMTTDIVFEALKSGRLSMDTEFTVTEDAWK 104

Query: 89  YPPS-----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              +     +   +  S + + + L+ LIV+S ND A+ IAE++  +E+ F   MN  +K
Sbjct: 105 RGGAGGGGSSMFAQVNSRIKMADLLRGLIVQSGNDAAITIAENMAGSEEAFAGLMNQRAK 164

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +GL+ + F NA G        TARDMA L+  I   +P Y   F  K       +  N 
Sbjct: 165 EIGLTNSTFRNATGYSAPDQKVTARDMAKLALHIIDTYPDYYKIFSEKEFTWNKIRQQNR 224

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +   +GADG+KTG+   SG+ +  SA+Q  Q L+ V+ G      R   S  L+  G
Sbjct: 225 NPLLALDIGADGLKTGYLEESGYALTGSAVQNGQRLVLVVSGLKTARDRASESRKLMEWG 284

Query: 264 FYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           F     R+         +       S  VP ++++         + +     A       
Sbjct: 285 FRAFEPRQVFAPGETVAEASVFGGQSGSVPLVAKKPVRVLLPRGSSDRVSARAIYTGPLI 344

Query: 321 IDFEKITLLKNKITKK 336
              E+   +     ++
Sbjct: 345 APVEEGQRVGILRVQR 360


>gi|83311550|ref|YP_421814.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum magneticum
           AMB-1]
 gi|82946391|dbj|BAE51255.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum magneticum
           AMB-1]
          Length = 388

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 140/341 (41%), Gaps = 8/341 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R     +A+ +++      + +         ++D  +G V+ E   D    P+S++KLMT
Sbjct: 8   RSLAAALAVPLMALSATAGAQSIETAAKQAIIIDYASGQVLMEKNADELMVPSSMSKLMT 67

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSN----STFKKGSTMTLDNALKLLIVKSAN 117
            ++VF  LK      +  + +S+ A +    +          ST T++  LK ++++S N
Sbjct: 68  VFMVFDKLKTGAWKPSDRLPVSETAWKRHYKSEGSLMFLPVNSTATVEELLKGVVIQSGN 127

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D    +AE+   +E+ F +     ++ +GL+ + F NA G  + GH  TARD+++L+  +
Sbjct: 128 DACSVLAEAHSGSEEAFAEEETRRARQIGLTRSVFKNASGWPEPGHLMTARDLSVLARHL 187

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             DFP+Y   F        G K  N N  +    GADG+KTG T A+G+ + AS  +G++
Sbjct: 188 IADFPEYYPLFSQMEFVFNGIKQGNRNPLLYNTPGADGLKTGHTEAAGYGLTASIKRGNR 247

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF----YQQNLSNEVPNIS 293
            +I ++ G      R + S  L    F             +              VP + 
Sbjct: 248 RIIMILNGMSSMKERAEESRRLTEWAFREWETYALFKAGEEVIPDAEVWLGQKETVPLLI 307

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           ++      +  N                  +    +   + 
Sbjct: 308 KDSLEVSMQRRNRLEMKVTTVYNGPIAAPVKAGQEVGKVVV 348


>gi|145636767|ref|ZP_01792433.1| hypothetical protein CGSHiHH_06620 [Haemophilus influenzae PittHH]
 gi|145270065|gb|EDK10002.1| hypothetical protein CGSHiHH_06620 [Haemophilus influenzae PittHH]
          Length = 393

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGITPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|254477194|ref|ZP_05090580.1| D-alanyl-D-alanine carboxypeptidase [Ruegeria sp. R11]
 gi|214031437|gb|EEB72272.1| D-alanyl-D-alanine carboxypeptidase [Ruegeria sp. R11]
          Length = 405

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 151/343 (44%), Gaps = 11/343 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+   + +A  +L ++    + A   +     +LD  T  V+     D    PAS++KLM
Sbjct: 21  MK---LAVAAGLLVSVSALSAAAFDTRARAAYVLDQETDTVLLNKNGDLALPPASMSKLM 77

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T YV F  +++ +  L   + +S++A  Y  S         + +++ L+ +IV S ND  
Sbjct: 78  TLYVAFEAIRDGRLTLDERLPVSEHAMSYKGSTMFLNTQDRVRVEDLLRGIIVLSGNDAC 137

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           V IAE+L     E  F ++M   ++ +G+  + F N++G    GH  + +D+AIL+ R+ 
Sbjct: 138 VVIAEALSPDGTEAGFARYMTKRAQEMGMENSTFANSNGWPAAGHRMSVQDLAILAERLI 197

Query: 179 TDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            DFP+Y   F  K  E          N N  +G  +GADG+KTG T  +G+ +V SA QG
Sbjct: 198 EDFPEYYPLFAEKRFEFDGRAPSNTRNRNPLLGLGIGADGLKTGHTSEAGYGLVGSAKQG 257

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           D+ +I VI G    N R + + ++++  F     +      +   +    +     V  +
Sbjct: 258 DRRVIFVITGLDSTNARAEEAEAIVNWSFRQFAKKTVAKAGVPVAEAEVWRGAEPTVGLV 317

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             E        +  +    E            K   L   + +
Sbjct: 318 PAEDLNILLPALAGDDIAAEVVYTGPIDAPITKGQKLAELVLQ 360


>gi|74095596|emb|CAJ27362.1| strongly similar to penicillin-binding protein 5 precursor
           [Cronobacter sakazakii]
          Length = 404

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 147/353 (41%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA----------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++  V  A+++ +      +                   Y L+D N+G V+AE   D  
Sbjct: 10  MQRLAVTTALSVAALSTAAHADDLNIKTMIPGVPQIDAEAYILIDYNSGKVLAEQNADAR 69

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTL 104
            +PASLTK+MT+YV+   +K  K   +  +TI  +A                K G  + +
Sbjct: 70  RDPASLTKMMTSYVIGQAMKAGKFKESDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPV 129

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              ++ + ++S ND  VA+A+ +  ++  FV  MN+    LGL  THF   HG+   G Y
Sbjct: 130 SQLIRGINLQSGNDACVAMADYVAGSQDAFVGLMNSYVTALGLKNTHFQTVHGLDADGQY 189

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCA 223
           ++ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  
Sbjct: 190 SSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQTNRNGLLWDNSLNVDGIKTGHTDK 249

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           +G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 250 AGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKAGKEFASEP 309

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  +       + +++  T       + +     +         K  ++   
Sbjct: 310 AWFGDNDRASLGVDKDIYLTIPRGRMKDLKASYVLNTSELHAPLAKNQVVGTI 362


>gi|125975657|ref|YP_001039567.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|125715882|gb|ABN54374.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
          Length = 418

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 11/315 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     ++D +TG V+ E         AS TK+MTA V           L   + 
Sbjct: 55  KPPRIEAKAAIVIDADTGRVLYEKDAYSRRAIASTTKIMTAIVAIEN-----GNLDDKVK 109

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S  A+    S    K G  +TL   L  ++++S ND A+A+AE +  T + FV+ MN+ 
Sbjct: 110 VSSRAASIWGSTIKLKPGEELTLKELLYGMMLRSGNDAALAVAEHVGGTVENFVKMMNDK 169

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LGL  T F   HG+   GHY+TA ++A+L+     + P +      K   I  +   
Sbjct: 170 ARELGLKNTAFKTPHGLDVEGHYSTAYELAMLTRYALQN-PVFAQIVATKSTTITNRSLY 228

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            TN  +  + GADG+KTG+T  +G  +V SA +    +I+V+L    R+ R + S ++L 
Sbjct: 229 TTNEMLSLYPGADGVKTGYTGKAGRCLVTSATRDGFKIISVVLNCSSRSKRAESSKAILD 288

Query: 262 MGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
             F N    + +    +      Y+    +      E +            + +   D E
Sbjct: 289 YAFNNYKPYELLRANQELGRVKVYKGKKDSVPVVAVESIKMPLSREEKEKLRTELTLD-E 347

Query: 318 SHFIDFEKITLLKNK 332
           +      K   +   
Sbjct: 348 TIKAPVYKGVEVGKI 362


>gi|220931542|ref|YP_002508450.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halothermothrix orenii H
           168]
 gi|219992852|gb|ACL69455.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halothermothrix orenii H
           168]
          Length = 397

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 147/323 (45%), Gaps = 11/323 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    L+  NTG ++ E  P     PAS+TK+MT  +V   L++ +A L   I +S
Sbjct: 35  FDLTAKSALLMQVNTGEILYEKNPHQKLPPASMTKIMTMLLVMEALEDGRASLRDSIIVS 94

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A+    S    + G  MTL++ +K + + SAND  VA+AE L  TE+ FV+ MN  ++
Sbjct: 95  ERAASMGGSQVYLEPGEEMTLEDLMKAIAIASANDACVAVAEYLYGTEEDFVKKMNEKAR 154

Query: 144 NLGLSATHFMNAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQ-YMHYFQIKGLEIKG 197
            LG   T+F N +G+        G+YT+A D+AI+S  +             I  L    
Sbjct: 155 ELGCKNTYFYNTNGLPPGDPSVEGNYTSAYDLAIMSRELLKYPEVLKWTSTWIDYLRDGE 214

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
               NTN  V  + G DG+KTG+T  + F +  +A +     IAVI+GA     R K +A
Sbjct: 215 FVLNNTNRLVRHYKGVDGIKTGYTEEAKFCVATTAARNGIRFIAVIMGADTSKARFKEAA 274

Query: 258 SLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVPNI--SEEVCTTQKEIINYNTQMKEA 313
            LLS GF         +   +I +   QN  NE   +    +V    K+    +   K+ 
Sbjct: 275 QLLSYGFSKYRSFIVADKEEVIDEITIQNAKNEQARVLTRNKVVIPVKKGEE-DEITKKI 333

Query: 314 KDKESHFIDFEKITLLKNKITKK 336
             KE+     +K   +      K
Sbjct: 334 IIKENIKAPLKKGDSVGKIRIYK 356


>gi|167037830|ref|YP_001665408.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300914766|ref|ZP_07132082.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X561]
 gi|307724000|ref|YP_003903751.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X513]
 gi|320116247|ref|YP_004186406.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166856664|gb|ABY95072.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300889701|gb|EFK84847.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X561]
 gi|307581061|gb|ADN54460.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X513]
 gi|319929338|gb|ADV80023.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 421

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 89/359 (24%), Positives = 160/359 (44%), Gaps = 31/359 (8%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +     + I +  ++ ++  +        P   L+D  TG V+ +        PAS
Sbjct: 1   MKKIIASLLTLFILVVQITPVYANVPPPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++TA +           L   +T S N ++   ++     G  +TL+  L  ++++S
Sbjct: 61  TTKILTAIIAIEK-----GNLNDIVTASNNVTKIDGNSIFLSPGEQLTLEQLLYAIMLQS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+AIAE +  + + F + MN  +K +G   +HF+N +G+    HY+T  DMA+++ 
Sbjct: 116 ANDAAIAIAEHIGGSVENFAKMMNEKAKEIGAYDSHFVNPNGLPDDNHYSTPYDMALIAR 175

Query: 176 RIKTDFP--------QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASG 225
               +           Y      K  +++     N     +   + GADG+KTG+T A+G
Sbjct: 176 YAMQNPEFRKIVTTIHYQIPPTNKFDKVRDLWLSNRLIKPSSFRYEGADGVKTGYTVAAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--Q 283
             + ASA +  + LI+VI+G    N     +  LL  GF N +  KK        Y    
Sbjct: 236 QVLAASATRDGRRLISVIMGDQGTNI-WTDTIKLLDYGFQNFSLVKKTEKGETITYIDLG 294

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHF-----IDFEKITLLKNKIT 334
               ++P I++E       + +  +  TQ+   KD ++       + + K TL  N+I 
Sbjct: 295 KSHFKLPLIAKEDFYYEVPKGQENSIETQIILNKDIKTPINKGDVLGYIKYTLDGNEIG 353


>gi|300692700|ref|YP_003753695.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Ralstonia solanacearum PSI07]
 gi|299079760|emb|CBJ52436.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Ralstonia solanacearum PSI07]
          Length = 397

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 146/330 (44%), Gaps = 15/330 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  A       + L D  +G V+     D    PASLTKLMTAY+ F  +++ K  
Sbjct: 29  ALAQPVPAPQVAARAWMLTDVTSGQVLGGGNMDERIEPASLTKLMTAYLAFEAVRDGKLK 88

Query: 76  LTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
               +T ++   + +   S    + G    +   L+ LIV+S ND A+ +AE++  TE  
Sbjct: 89  YDQMVTPTETVRSVKTDESRMFLQAGKPAAVRELLQGLIVQSGNDAALVLAEAVGGTEAN 148

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  ++ LG+  THFMNA G+    HYTTARD++IL+  +  DFP+   ++  K  
Sbjct: 149 FVMLMNREAERLGMKNTHFMNAAGLPDPNHYTTARDLSILTTALIRDFPEDYKFYSQKEF 208

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGA 246
                K PN N  +      DG+KTG T ++G+ ++ SA +         + L++V++G 
Sbjct: 209 TYNNIKQPNRNRLLWIDPTVDGVKTGHTKSAGYCLITSAKRPLPDMPNASRRLLSVMIGT 268

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE--VCTTQ 300
                R + S  +L+ G+      +           D Y+         ++E+  +   +
Sbjct: 269 KSEQVRTQESLKVLNYGYQFFDTLRLYEARQALQTPDVYKGQAKTVKLGVAEDKWITVPK 328

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    ++  +   +     + +  LK
Sbjct: 329 GSGSRLKPVLERKEPLIAPIAQGQPLGTLK 358


>gi|167040728|ref|YP_001663713.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X514]
 gi|166854968|gb|ABY93377.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter sp.
           X514]
          Length = 421

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 89/359 (24%), Positives = 159/359 (44%), Gaps = 31/359 (8%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +     + I +  ++ ++  +        P   L+D  TG V+ +        PAS
Sbjct: 1   MKKIIASLLTLFILVVQITPVYANVPPPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++TA +           L   +T S N ++   ++     G  +TL+  L  ++++S
Sbjct: 61  TTKILTAIIAIEK-----GNLNDIVTASNNVTKIDGNSIFLSPGEQLTLEQLLYAIMLQS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+AIAE +  + + F + MN  +K +G   +HF+N +G+    HY+T  DMA+++ 
Sbjct: 116 ANDAAIAIAEHIGGSVENFAKMMNEKAKEIGAYDSHFVNPNGLPDDNHYSTPYDMALIAR 175

Query: 176 RIKTDFP--------QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASG 225
               +           Y      K  +++     N     +   + GADG+KTG T A+G
Sbjct: 176 YAMQNPEFRKIVTTIHYQIPPTNKFDKVRDLWLSNRLIKPSSFRYEGADGVKTGDTVAAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--Q 283
             + ASA +  + LI+VI+G    N     +  LL  GF N +  KK        Y    
Sbjct: 236 QVLAASATRDGRRLISVIMGDQGTNI-WTDTIKLLDYGFQNFSLVKKTEKGETITYIDLG 294

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHF-----IDFEKITLLKNKIT 334
               ++P I++E       + +  +  TQ+   KD ++       + + K TL  N+I 
Sbjct: 295 KSHFKLPLIAKEDFYYEVPKGQENSIETQIILNKDIKTPINKGDVLGYIKYTLDGNEIG 353


>gi|281416665|ref|ZP_06247685.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           JW20]
 gi|281408067|gb|EFB38325.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           JW20]
          Length = 396

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 11/315 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     ++D +TG V+ E         AS TK+MTA V           L   + 
Sbjct: 33  KPPRIEAKAAIVIDADTGRVLYEKDAYSRRAIASTTKIMTAIVAIEN-----GNLDDKVK 87

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S  A+    S    K G  +TL   L  ++++S ND A+A+AE +  T + FV+ MN+ 
Sbjct: 88  VSSRAASIWGSTIKLKPGEELTLRELLYGMMLRSGNDAALAVAEHVGGTVENFVKMMNDK 147

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LGL  T F   HG+   GHY+TA ++A+L+     + P +      K   I  +   
Sbjct: 148 ARELGLKNTAFKTPHGLDVEGHYSTAYELAMLTRYALQN-PVFAQIVATKSTTITNRSLY 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            TN  +  + GADG+KTG+T  +G  +V SA +    +I+V+L    R+ R + S ++L 
Sbjct: 207 TTNEMLSLYPGADGVKTGYTGKAGRCLVTSATRDGFKIISVVLNCSSRSKRAESSKTILD 266

Query: 262 MGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
             F N    + +    +      Y+    +      E +            + +   D E
Sbjct: 267 YAFNNYKPYELLRANQELGRVKVYKGKKDSVPVVAVESIKMPLSREEKEKLRTELTLD-E 325

Query: 318 SHFIDFEKITLLKNK 332
           +      K   +   
Sbjct: 326 TIKAPVYKGVEVGKI 340


>gi|256752163|ref|ZP_05493029.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748977|gb|EEU62015.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 421

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 89/359 (24%), Positives = 160/359 (44%), Gaps = 31/359 (8%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +     + I +  ++ ++  +        P   L+D  TG V+ +        PAS
Sbjct: 1   MKKIIASLLTLFILVVQITPVYANVPPPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++TA +           L   +T S N ++   ++     G  +TL+  L  ++++S
Sbjct: 61  TTKILTAIIAIEK-----GNLNDIVTASNNVTKIDGNSIFLSPGEQLTLEQLLYAIMLQS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+AIAE +  + + F + MN  +K +G   +HF+N +G+    HY+T  DMA+++ 
Sbjct: 116 ANDAAIAIAEHIGGSVENFAKMMNEKAKEIGAYDSHFVNPNGLPDDNHYSTPYDMALIAR 175

Query: 176 RIKTDFP--------QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASG 225
               +           Y      K  +++     N     +   + GADG+KTG+T A+G
Sbjct: 176 YAMQNPEFRKIVTTIHYQIPPTNKFDKVRDLWLSNRLIKPSSFRYEGADGVKTGYTVAAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--Q 283
             + ASA +  + LI+VI+G    N     +  LL  GF N +  KK        Y    
Sbjct: 236 QVLAASATRDGRRLISVIMGDQGTNI-WTDTIKLLDYGFQNFSLVKKTEKGETITYIDLG 294

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHF-----IDFEKITLLKNKIT 334
               ++P I++E       + +  +  TQ+   KD ++       + + K TL  N+I 
Sbjct: 295 KSHFKLPLIAKEDFYYEVPKGQENSIETQIILNKDIKTPINKGDVLGYIKYTLDGNEIG 353


>gi|157145043|ref|YP_001452362.1| D-alanyl-D-alanine carboxypeptidase [Citrobacter koseri ATCC
           BAA-895]
 gi|157082248|gb|ABV11926.1| hypothetical protein CKO_00774 [Citrobacter koseri ATCC BAA-895]
          Length = 420

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/336 (25%), Positives = 147/336 (43%), Gaps = 11/336 (3%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++ A+ +++  F       +   + L+D  TG ++         NPASLTKLMT YVV  
Sbjct: 48  LSSALAADVPDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQRRNPASLTKLMTGYVVDR 107

Query: 68  FLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAV 121
            +   +      +T+ ++A                K+G  +++ +  + LIV S ND  V
Sbjct: 108 AIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKQGERVSVRDLSRGLIVDSGNDACV 167

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+A+ +   + +FV  MN+  + L L  THF   HG+   G +++A D+A+LS  I    
Sbjct: 168 ALADYIAGGQPQFVAMMNHYVETLKLQDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGE 227

Query: 182 PQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P++ H +  K L   G    N N       +  DG+KTG T  +GFN++AS++ G + LI
Sbjct: 228 PEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNIDGLKTGHTSGAGFNLIASSVDGQRRLI 287

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEV 296
           AV++GA     R   +  LL  G  N    + +    +      +  +  N      ++ 
Sbjct: 288 AVVMGAESAKGREDQARKLLQWGQQNFDTVQILRSGKQVGTERIWYGDKENIALGTEQDF 347

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +    + + + A DK+           +   
Sbjct: 348 WMALPKTEIPHIKARYALDKKELEAPIAAHQRVGEI 383


>gi|168210830|ref|ZP_02636455.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens B str.
           ATCC 3626]
 gi|170711096|gb|EDT23278.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens B str.
           ATCC 3626]
          Length = 402

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       I +++ S +      AE     +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFAIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKIMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  +K LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAKELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++      +       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDGEVEQIPMSQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +    +++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKDDLTLVCPKGMSEKIEKKVVLDESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|312171895|emb|CBX80152.1| D-alanyl-D-alanine carboxypeptidase [Erwinia amylovora ATCC
           BAA-2158]
          Length = 402

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 143/325 (44%), Gaps = 11/325 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +  A       + L+D N+  V+AE   D   +PASLTK+M++YV+   LK  K     
Sbjct: 32  QMPAAPQLDAKAWILMDYNSSKVLAEYNADLRLDPASLTKMMSSYVIGQALKAGKISKDD 91

Query: 79  PITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +T+ K+A                K G  + +    K ++++S ND ++A+A+ +  ++ 
Sbjct: 92  VVTVGKDAWATGNPVLKGSSLMFLKPGDRIAVSELNKGIVIQSGNDASIALADYVAGSQD 151

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  MN+  + LGL  THF   HG+  +G Y+TARDMA++   +  D P      + K 
Sbjct: 152 AFVGLMNHYVQALGLKNTHFKTVHGLDANGQYSTARDMALIGQALIRDVPDEYALHKDKA 211

Query: 193 LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 +  N N     T L  DG+KTG T  +G N+VASA+ GD+ +I+V+LGA     
Sbjct: 212 FTFNKIRQHNRNRLLWSTNLQVDGIKTGHTSGAGNNLVASAVDGDRRIISVVLGAATDAV 271

Query: 252 RNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + S  LL  G  N      +        +  +  +       ++++   T       N
Sbjct: 272 RFRESEKLLIWGLRNFETVTPVKAGNAFVTQRVWYGDRHEVNLGVAQDAAITLPHGQMKN 331

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +      +        K  ++   
Sbjct: 332 LKASFTLSQPQLTAPLAKNQVVGTI 356


>gi|329123117|ref|ZP_08251687.1| D-alanyl-D-alanine carboxypeptidase DacA [Haemophilus aegyptius
           ATCC 11116]
 gi|327471672|gb|EGF17114.1| D-alanyl-D-alanine carboxypeptidase DacA [Haemophilus aegyptius
           ATCC 11116]
          Length = 393

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 148/341 (43%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +        +  Y  +  +      +
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEASKVISEQPVYYGDKGSVKLGTLQ 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +   + ++      K  ++   + +
Sbjct: 314 DRFITIPKGKQNELKARYEFEGKNLQAPLAKGQIVGKVVYQ 354


>gi|251790547|ref|YP_003005268.1| D-alanyl-D-alanine carboxypeptidase fraction A [Dickeya zeae
           Ech1591]
 gi|247539168|gb|ACT07789.1| Beta-lactamase [Dickeya zeae Ech1591]
          Length = 403

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 20/351 (5%)

Query: 2   RQFLVIIAMAMLSNIFPF---------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++  +   +A+ ++ F +         +          Y L+D N+G V+AE   D   N
Sbjct: 11  KRIALGTLLAISASTFAYADDINLKTMIPAVPDIDAEAYILIDYNSGKVLAEKNADTRRN 70

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS------EYPPSNSTFKKGSTMTLDN 106
           PASLTK+MT+YV+   +K  K      +TI K+A           S    K G  + +  
Sbjct: 71  PASLTKMMTSYVIGQAIKAGKITPNDVVTIGKDAWATGNPDFQGSSLMFLKPGDRVPVYL 130

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             K +I++S ND  VA+A+ +  ++  FV  MN   K LGL  T+F   HG+   G +++
Sbjct: 131 LNKGIILQSGNDACVAMADYVAGSQDAFVNLMNGYVKALGLQNTNFKTVHGLDAEGQFSS 190

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           ARDMA++   +  D P     ++ K       +  N N     + L  DG+KTG T ++G
Sbjct: 191 ARDMALIGQALIRDVPDEYATYKEKEFTFNNIRQMNRNGLLWDSSLAVDGIKTGHTASAG 250

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFY 281
           +N+VASA +G   LI+ ++G      R   S  LL+ GF        +        +  +
Sbjct: 251 YNLVASATEGQVRLISAVMGGRTFKGREAESKKLLTWGFRFFETVAPLKTGKEFASEPVW 310

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +       + ++   T       + +               K  ++   
Sbjct: 311 FGDSDRVSLGVDKDAYITIPRGRMKDLKASYVLTNTELHAPLAKNQVVGTI 361


>gi|260582057|ref|ZP_05849852.1| D-alanyl-D-alanine carboxypeptidase [Haemophilus influenzae NT127]
 gi|260094947|gb|EEW78840.1| D-alanyl-D-alanine carboxypeptidase [Haemophilus influenzae NT127]
          Length = 393

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FAALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K PN N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|168206139|ref|ZP_02632144.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens E str.
           JGS1987]
 gi|170662449|gb|EDT15132.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens E str.
           JGS1987]
          Length = 402

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/357 (24%), Positives = 158/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       I +++ S +      AE     +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFAIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKIMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  ++ LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAQELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++      +       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDSEVEQIPMSQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +    +++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKDDLTLVCPKGMSDKIEKKVILDESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|293395975|ref|ZP_06640256.1| D-alanyl-D-alanine carboxypeptidase DacA [Serratia odorifera DSM
           4582]
 gi|291421473|gb|EFE94721.1| D-alanyl-D-alanine carboxypeptidase DacA [Serratia odorifera DSM
           4582]
          Length = 382

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 150/345 (43%), Gaps = 18/345 (5%)

Query: 6   VIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++I + +        +                Y L+D  +G ++A+N+ D   NPASLTK
Sbjct: 1   MVIGILLPLAAQAADTAGDFPSLTPPPIDAASYVLMDYASGQIMAQNHADQRRNPASLTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLI 112
           LMT  V+   L + K  L   +T+ K+A                K G  +T+ +  + +I
Sbjct: 61  LMTGLVIDHALDQHKISLDDVVTVGKDAWAAGNPVFKGSSLMFLKPGDRVTVRDLSRGII 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  VA+A+ +  ++  FV  MNN +  LGL  THF   HG+   G YTTA D+A+
Sbjct: 121 IDSGNDACVAMADYVAGSQTAFVDLMNNKAAQLGLKNTHFETVHGLDAPGQYTTAGDLAV 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           +S  I    P   H +  + L   G    N N       L  DG+KTG T ++GFNI+AS
Sbjct: 181 ISRAIIMSEPAEYHMYSERSLTWNGITQQNRNGLLWDKTLHVDGLKTGHTESAGFNIIAS 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSN 287
           A +GD+ LIAV++G      R + +  LLS G  +    +          +  +  + S 
Sbjct: 241 ATEGDRRLIAVVMGGKSPKGREEQARKLLSWGLRDFDSVRVFKAGQPLGNEAVWYGDRSR 300

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               ++++   T  +      + +   +         +   +   
Sbjct: 301 IAVGVAQDRYLTLPKGEASKLKAQYVLNVPRLEAPLPQGQTVGEV 345


>gi|167835257|ref|ZP_02462140.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 374

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 15/332 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P            + L+D ++  V+A    D    PASLTKLMTAY+VF  L  KK
Sbjct: 3   ATYVPGAVPPPGVNARSWVLVDASSNQVLASGNADERVEPASLTKLMTAYLVFEALDAKK 62

Query: 74  AMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             +   +T  +         S    +    +++ + +  +I++S ND A+A+AE +  +E
Sbjct: 63  ITMEQIVTPGEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSE 122

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +FV  MN  ++ LG++ THF + +G+    HYTTA D+A LS  +  D+P Y + F +K
Sbjct: 123 GQFVNMMNAQAQRLGMTNTHFADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVK 182

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVIL 244
                  K PN N  +      DG+KTG T A+G+ ++ASA +         + L+ V++
Sbjct: 183 EFAYNNIKQPNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRSLPGAADATRRLVTVMM 242

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCT 298
           G    + R + S  +LS G+      +             Y+   +N    + ++  +  
Sbjct: 243 GETKESDRVQDSMKMLSYGYTAFDSVRLYKAGQPIDTPRVYKGKSNNVQVGVKKDQFITV 302

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +        ++       +   D + +  +K
Sbjct: 303 PRGLADKVKPEVALNAPLIAPLADGQAVGSVK 334


>gi|182625695|ref|ZP_02953464.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens D str.
           JGS1721]
 gi|177909097|gb|EDT71572.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens D str.
           JGS1721]
          Length = 402

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/357 (24%), Positives = 158/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       I +++ S +      AE     +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFAIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKIMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  ++ LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAQELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++      +       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDGEVEQIPMSQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +    +++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKDDLTLVCPKGMSDKIEKKVVLDESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|18310788|ref|NP_562722.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium perfringens
           str. 13]
 gi|110799537|ref|YP_696490.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens ATCC
           13124]
 gi|168214381|ref|ZP_02640006.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens CPE
           str. F4969]
 gi|18145469|dbj|BAB81512.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium perfringens
           str. 13]
 gi|110674184|gb|ABG83171.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens ATCC
           13124]
 gi|170714156|gb|EDT26338.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens CPE
           str. F4969]
          Length = 402

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       I +++ S +      AE     +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFAIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKIMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  +K LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAKELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++      +       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDGEVEQIPMSQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +    +++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKDDLTLVCPKGMSDKIEKKVVLDESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|68248580|ref|YP_247692.1| penicillin-binding protein 5 [Haemophilus influenzae 86-028NP]
 gi|68056779|gb|AAX87032.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           86-028NP]
          Length = 393

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|161504189|ref|YP_001571301.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865536|gb|ABX22159.1| hypothetical protein SARI_02296 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 403

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 141/347 (40%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 135 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 194

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 195 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 254

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N 
Sbjct: 255 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNT 314

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 315 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 361


>gi|16759596|ref|NP_455213.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29142631|ref|NP_805973.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56414228|ref|YP_151303.1| D-alanyl-D-alanine carboxypeptidase subunit A [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363151|ref|YP_002142788.1| D-alanyl-D-alanine carboxypeptidase subunit A [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|25297769|pir||AH0580 D-alanine carboxypeptidase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501888|emb|CAD05114.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138262|gb|AAO69833.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128485|gb|AAV77991.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094628|emb|CAR60150.1| D-alanine carboxypeptidase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 403

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 141/347 (40%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 135 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 194

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 195 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 254

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N 
Sbjct: 255 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNT 314

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 315 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 361


>gi|37525261|ref|NP_928605.1| D-alanyl-D-alanine carboxypeptidase fraction A [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784688|emb|CAE13588.1| penicillin-binding protein 5 precursor (D-alanyl-D-alanine
           carboxypeptidase fraction A) (DD-peptidase)
           (DD-caroboxypeptidase) (PBP-5) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 389

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 89/345 (25%), Positives = 151/345 (43%), Gaps = 20/345 (5%)

Query: 8   IAMAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           IA+A+ ++ F   + A                Y L+D N+G V+AE   D   +PASLTK
Sbjct: 3   IALAISASAFANGNDANLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADAHRDPASLTK 62

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLI 112
           +MT+YV+   +K  K   +  +T+  +A                K G  +++    + + 
Sbjct: 63  MMTSYVIGQAIKSGKIHPSDMVTVGTDAWATGNPVFKGSSLMFLKPGDQVSVSMLSRGIN 122

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND  VA+A+ +  +++ FV  MN   K+LGL  T+F   HG+   G Y++ARDMA+
Sbjct: 123 LQSGNDACVAMADYVAGSQESFVNLMNGYVKSLGLKNTNFKTVHGLDAEGQYSSARDMAL 182

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVAS 231
           +   +  D P+    ++ K       +  N N       L  DG+KTG T A+G+N+VAS
Sbjct: 183 IGQALIRDVPEEYTIYKEKEFTYNNIRQTNRNGLLWDKSLNVDGIKTGHTSAAGYNLVAS 242

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSN 287
           A +GD  LI+ +LG      R   S  LL+ GF        +        +  +  +   
Sbjct: 243 ATEGDMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKASKEFASEPVWFGDNDR 302

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + ++V  T       + +     +         K  ++   
Sbjct: 303 VQLGVDKDVYLTIPRGRLKDLKASYVMNNSELHAPLAKNQVVGTI 347


>gi|319774981|ref|YP_004137469.1| penicillin-binding protein 5 [Haemophilus influenzae F3047]
 gi|317449572|emb|CBY85777.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           F3047]
          Length = 393

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +        +  Y  +  +      +
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKVISEQPVYYGDKGSVKLGTLQ 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      +     + ++      K  ++   + +
Sbjct: 314 DRFITIPKGKQNELKAHYELEGKNLQAPLAKGQIVGKVVYQ 354


>gi|262368687|ref|ZP_06062016.1| penicillin-binding protein 6 [Acinetobacter johnsonii SH046]
 gi|262316365|gb|EEY97403.1| penicillin-binding protein 6 [Acinetobacter johnsonii SH046]
          Length = 382

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/339 (25%), Positives = 146/339 (43%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
               + +  +S     LS         Y L+D  TG ++A    +    PAS+TK+MT++
Sbjct: 7   LAAALLVPSISFAATVLSSPPELNNKSYVLMDYETGQILASKNENEKLAPASMTKMMTSF 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L   +      + ++++A        S        T T    L+ +I++S ND +
Sbjct: 67  IIEQKLLAGELTEDEKVRMNESAWCRGSSSESCMYVPLNGTATALEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  FV  MN  +K +G++ T FMN+ G+   GHY+TA+DMA L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFVHMMNTEAKRIGMTNTSFMNSTGMPAEGHYSTAKDMATLAQHIIHD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  SA +G   LI
Sbjct: 187 SSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSAKRGPMRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE-- 294
           +VI GA     R   +  +L+ G+ N   +              +    S+    ++E  
Sbjct: 247 SVIFGAPSMQERATQTREILAWGYANFETKNVQAANQVLAKSKVWFGKESDVQIGLAETF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     +       +K  ++   +
Sbjct: 307 NVTMPKGQANAIKTQLVV---QPKLTAPLKKGQVVGKYV 342


>gi|213425100|ref|ZP_03357850.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|289823664|ref|ZP_06543276.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
          Length = 427

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 141/347 (40%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 39  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 98

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 99  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 158

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 159 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 218

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 219 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 278

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N 
Sbjct: 279 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNT 338

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 339 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 385


>gi|213646564|ref|ZP_03376617.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 427

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 140/347 (40%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S                       Y L+D N+G V+AE   D   +PASL
Sbjct: 39  LTTALCATFISTAHADDLNIKTMTPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 98

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 99  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 158

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 159 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 218

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 219 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 278

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N 
Sbjct: 279 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNT 338

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 339 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 385


>gi|153855284|ref|ZP_01996450.1| hypothetical protein DORLON_02464 [Dorea longicatena DSM 13814]
 gi|149752283|gb|EDM62214.1| hypothetical protein DORLON_02464 [Dorea longicatena DSM 13814]
          Length = 393

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 99/327 (30%), Positives = 158/327 (48%), Gaps = 14/327 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E    P   L++ +TG +I E  PD    PAS+TK+MT  ++F  L   +  L   +T S
Sbjct: 36  EQISAPSAILMEASTGQIIYEKNPDEKLPPASVTKVMTLLLIFDALDSGQIKLGDEVTTS 95

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A+    S    + G T T+D  +K + V SAND  V +AE +C  E++FV  MN  +K
Sbjct: 96  EYAASMGGSQVFLEPGETQTVDTLIKCISVASANDACVTMAEYICGNEEEFVTKMNKRAK 155

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
           +LG+  THF+N +G+   GH TTARD+A++S  + T +PQ   Y  I    I  K     
Sbjct: 156 DLGMKNTHFVNCNGLDADGHLTTARDIALMSKELITTYPQIFDYCNIWMENIIHKTQKGE 215

Query: 201 -----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 NTN  +  +  A G+KTG T  + F + A+  + D  LIAVI+ A D   R + 
Sbjct: 216 SEFGLTNTNKLIRQYEYATGLKTGSTSKAKFCVSATGRKDDIDLIAVIMAADDSKARVRD 275

Query: 256 SASLLSMGFYNK-TDRKKINYIIKDFYQQNLSNEVPNISEE-----VCTTQKEIINYNTQ 309
           + +LL+ GF       +K    I     +    +   + ++     V TT  ++     +
Sbjct: 276 AITLLNYGFGKCQKYTEKKQKKISPVEVRGGREKQVKVRQQGAFTYVDTTGADLTKIENK 335

Query: 310 MKEAKDKESHFIDFEKITLLKNKITKK 336
            ++ K+ ++     EK+      +  K
Sbjct: 336 TRKDKNVKAPLKKGEKVGETMYYLNGK 362


>gi|146340768|ref|YP_001205816.1| putative Serine-type D-Ala-D-Ala carboxypeptidase [Bradyrhizobium
           sp. ORS278]
 gi|146193574|emb|CAL77591.1| putative Serine-type D-Ala-D-Ala carboxypeptidase [Bradyrhizobium
           sp. ORS278]
          Length = 384

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/313 (27%), Positives = 134/313 (42%), Gaps = 9/313 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
             P   L++  +G V+ E   D    P+S+ KLMTA VVF+ +KE    L     IS+NA
Sbjct: 22  DAPTAILVEATSGSVLFEKNADELRAPSSMMKLMTAEVVFNAVKEGTVKLNDEYRISENA 81

Query: 87  SEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV-QHMNN 140
                     S       S + + + L   I++S ND  +A+AE +   EK F   +M  
Sbjct: 82  WRKGGAPSGTSTMFAALNSKVPVSDLLHGAIIQSGNDACIALAEGMAGNEKIFAADYMTK 141

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ LGLS + F N++G+   G+  T R++++L+  I  DFP++   F  K       + 
Sbjct: 142 RARELGLSKSTFANSNGLPDPGNKMTVRELSMLARHIILDFPEFYKIFGEKEFTWNKIRQ 201

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +    GADG+KTG+T   G+ +V SA+Q    LI V+ G  D   R   +  +L
Sbjct: 202 QNRNPLLNAMEGADGLKTGYTKEGGYGMVGSAVQNGTRLIVVVNGLEDPEDRATEAKKML 261

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK---EAKDKE 317
             GF N   R          Y +    E  ++        K ++  N   K         
Sbjct: 262 EWGFRNFETRTLFAADQTLGYAKVFGGESRSVKLSSPVPVKVMVQKNGGEKLLARIIYSG 321

Query: 318 SHFIDFEKITLLK 330
                 E    + 
Sbjct: 322 PVKAPVEAGQKVG 334


>gi|261341254|ref|ZP_05969112.1| D-alanyl-D-alanine carboxypeptidase DacA [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316558|gb|EFC55496.1| D-alanyl-D-alanine carboxypeptidase DacA [Enterobacter cancerogenus
           ATCC 35316]
          Length = 403

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADARRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +TI  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  +HF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVTALGLKNSHFQTVHGLDAEGQYSSARDMALIGQALIRDVPNEYTI 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQTNRNGLLWDNSLNVDGIKTGHTEKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + +++  T   
Sbjct: 272 RTFKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPVWFGDNDRASLGVDKDLYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYVLNTSELHAPLQKNQVVGTI 361


>gi|259908963|ref|YP_002649319.1| D-alanyl-D-alanine carboxypeptidase [Erwinia pyrifoliae Ep1/96]
 gi|224964585|emb|CAX56098.1| D-alanyl-D-alanine carboxypeptidase [Erwinia pyrifoliae Ep1/96]
 gi|283478973|emb|CAY74889.1| dacC [Erwinia pyrifoliae DSM 12163]
          Length = 402

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 11/325 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +  A       + L+D ++  V+AE+  D   +PASLTK+M++YV+   LK  K     
Sbjct: 32  QMPAAPQIDAKAWILMDYSSSKVLAESNADLRLDPASLTKMMSSYVIGQALKAGKIGKDD 91

Query: 79  PITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +T+ K+A                K G  + +    K ++++S ND ++A+A+ +  ++ 
Sbjct: 92  LVTVGKDAWATGNPVLKGSSLMFLKPGDHIAVSELNKGIVIQSGNDASIALADYVAGSQD 151

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  MNN  + LGL  THF   HG+   G Y+TARDMA++   +  D P      + K 
Sbjct: 152 AFVGLMNNYVQALGLKNTHFKTVHGLDASGQYSTARDMALIGQALIRDVPDEYALHKEKV 211

Query: 193 LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 +  N N     T L  DG+KTG T  +G N+VASA+ GD+ +I+V+LGA     
Sbjct: 212 FTFNNIRQYNRNRLLWSTSLQVDGIKTGHTSGAGNNLVASAVDGDRRMISVVLGAATDAI 271

Query: 252 RNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + S  LL+ G  N      +        +  +  +       ++++   T       N
Sbjct: 272 RFRESEKLLTWGLRNFETVTPVKAGKAFVTQRVWYGDRQKVNLGVAQDAAITLPHGQMKN 331

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +      +        K  ++   
Sbjct: 332 LKASFTLSQPQLTAPLAKNQVVGTL 356


>gi|156934847|ref|YP_001438763.1| D-alanyl-D-alanine carboxypeptidase fraction A [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156533101|gb|ABU77927.1| hypothetical protein ESA_02695 [Cronobacter sakazakii ATCC BAA-894]
          Length = 428

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 147/353 (41%), Gaps = 21/353 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA----------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++  V  A+++ +      +                   Y L+D N+G V+AE   D  
Sbjct: 34  MQRLAVTTALSVAALSTAAHADDLNIKTMIPGVPQIDAEAYILIDYNSGKVLAEQNADAR 93

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTL 104
            +PASLTK+MT+YV+   +K  K   +  +TI  +A                K G  + +
Sbjct: 94  RDPASLTKMMTSYVIGQAMKAGKFKESDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPV 153

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              ++ + ++S ND  VA+A+ +  ++  FV  MN+    LGL  THF   HG+   G Y
Sbjct: 154 SQLIRGINLQSGNDACVAMADYVAGSQDAFVGLMNSYVTALGLKNTHFQTVHGLDADGQY 213

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCA 223
           ++ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  
Sbjct: 214 SSARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQTNRNGLLWDNSLNVDGIKTGHTDK 273

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KD 279
           +G+N+VASA +G   LI+ ++G      R   S  LL+ GF        +        + 
Sbjct: 274 AGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKAGKEFASEP 333

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  +       + +++  T       + +     +         K  ++   
Sbjct: 334 AWFGDNDRASLGVDKDIYLTIPRGRMKDLKASYVLNTSELHAPLAKNQVVGTI 386


>gi|309972837|gb|ADO96038.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5
           [Haemophilus influenzae R2846]
          Length = 393

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVFAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|229845375|ref|ZP_04465506.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           6P18H1]
 gi|229811683|gb|EEP47381.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           6P18H1]
          Length = 393

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|114770997|ref|ZP_01448437.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium
           HTCC2255]
 gi|114548279|gb|EAU51165.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium
           HTCC2255]
          Length = 382

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 4/337 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+ F  II + +++ I   +  A         ++D  TG ++     D    PAS++KLM
Sbjct: 1   MKSFYKIITIFIITLITSPV-NAFDTIARSAMVIDQTTGTILMAKDADRRVPPASMSKLM 59

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T +++F  L++++  + T   +S+ A++   S    ++G  +++ + ++ +IV+S ND  
Sbjct: 60  TLFMLFEALRDERIAMDTEFLVSERATKIGGSTMFLREGERVSVRDLIQGIIVQSGNDAC 119

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           + +AE++  TE  F   M   +  LG++ + F N+ G        +ARD+  ++  I T+
Sbjct: 120 ITVAENIAGTETAFADQMTKRAIELGMNNSSFGNSTGWPDPLQRMSARDLVTIANIIITE 179

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP Y  +F        G K  N N  +   +GADG+KTG T  +G+ +V SA QG + +I
Sbjct: 180 FPNYYPFFAQTSFTWDGVKQNNRNPLLPLGIGADGLKTGHTNEAGYGLVGSARQGQRRII 239

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVC 297
            +I G   +  R   +  L +  F     +        I K       +  +  I+E+  
Sbjct: 240 FMITGLESKAARANEAEKLTNWAFRQFVIKDLFKKDEVISKADVWLGENKTIDLIAEDNI 299

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +    + +      E   K       +K   +     
Sbjct: 300 SGLFPLGSLKNVDIEINYKGPIAAPIKKGDRIAILTV 336


>gi|169343702|ref|ZP_02864701.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens C str.
           JGS1495]
 gi|169298262|gb|EDS80352.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens C str.
           JGS1495]
          Length = 402

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/357 (24%), Positives = 159/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       I +++ S +      AE     +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFAIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKIMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  ++ LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAEELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++     I+       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDIEVEQIPMSQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +    +++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKDDLTLVCPKGMSDKIEKKVILDESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|168215435|ref|ZP_02641060.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens NCTC
           8239]
 gi|182382426|gb|EDT79905.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens NCTC
           8239]
          Length = 402

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       I +++ S +      AE     +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFAIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKIMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  +K LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAKELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++      +       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDGEVEQIPMSQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +    +++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKDDLTLVCPKGMSDKIEKKVVLYESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|256003606|ref|ZP_05428595.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 2360]
 gi|255992397|gb|EEU02490.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 2360]
 gi|316939774|gb|ADU73808.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           DSM 1313]
          Length = 396

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/315 (25%), Positives = 134/315 (42%), Gaps = 11/315 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     ++D +TG V+ E         AS TK+MTA V           L   + 
Sbjct: 33  KPPRIEAKAAIVIDADTGRVLYEKDAYSRRAIASTTKIMTAIVAIEN-----GNLDDKVK 87

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S  A+    S    K G  +TL   L  ++++S ND A+A+AE +  T + FV+ MN+ 
Sbjct: 88  VSSRAASIWGSTIKLKPGEELTLKELLYGMMLRSGNDAALAVAEHVGGTVENFVKMMNDK 147

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LGL  T F   HG+   GHY+TA ++A+L+     + P +      K   I  +   
Sbjct: 148 ARELGLKNTAFKTPHGLDVEGHYSTAYELAMLTRYALQN-PVFAQIVATKSTTITNRSLY 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            TN  +  + GADG+KTG+T  +G  +V SA +    +I+V+L    R+ R + S ++L 
Sbjct: 207 TTNEMLSLYPGADGVKTGYTGKAGRCLVTSATRDGFKIISVVLNCSSRSKRAESSKTILD 266

Query: 262 MGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
             F N    + +    +      Y+    +      E +            + +   D E
Sbjct: 267 YAFNNYKPYELLRANQELGRVKVYKGKKDSVPVVAVESIKMPLSREEKEKLRTELTLD-E 325

Query: 318 SHFIDFEKITLLKNK 332
           +      K   +   
Sbjct: 326 TIKAPVYKGVEVGKI 340


>gi|259415214|ref|ZP_05739136.1| serine-type D-Ala-D-Ala carboxypeptidase [Silicibacter sp.
           TrichCH4B]
 gi|259349124|gb|EEW60878.1| serine-type D-Ala-D-Ala carboxypeptidase [Silicibacter sp.
           TrichCH4B]
          Length = 393

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/348 (24%), Positives = 149/348 (42%), Gaps = 18/348 (5%)

Query: 3   QFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +F+       L+ ++   S     A   K     ++D  T  V+     D P  PAS++K
Sbjct: 4   RFISATCFGALAGLWLASSTTALQAFETKARAAYVVDQGTNTVLLSKNADVPMPPASMSK 63

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMT YV F  +++ +  +   + +S++A  Y  S         + +++ L+ +IV S ND
Sbjct: 64  LMTLYVAFEAVRDGRLTMDERLPVSEHAMSYKGSTMFLDTTDRVRVEDLLRGIIVLSGND 123

Query: 119 IAVAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
               IAE+L     E  F ++M   ++ LG+S + FMN++G    GH  + RD+AIL+  
Sbjct: 124 ACAVIAEALSPDGTEAGFARYMTRRARELGMSESTFMNSNGWPDQGHEMSVRDLAILAEH 183

Query: 177 IKTDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  DFP++   F  +             N N  +   +GADG+KTG T  +G+ +V SA 
Sbjct: 184 LIEDFPEFYPMFSEQEFAFDGRAPSNTRNRNPLLQLDIGADGLKTGHTQEAGYGLVGSAK 243

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE----- 288
           QGD+ +I VI G      R + S ++++  F   T +      I     +    +     
Sbjct: 244 QGDRRVIFVISGMNSTPERAEESEAIVNWAFRQFTKKTIAREGIAIEQAEVWMGDSPTVG 303

Query: 289 -VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            VP  + E+            ++             +    L   + K
Sbjct: 304 LVPAENLEILLPALSGDAIKAEVVYT---GPVTAPIQAGQQLAELVVK 348


>gi|262376081|ref|ZP_06069312.1| penicillin-binding protein 6 [Acinetobacter lwoffii SH145]
 gi|262309175|gb|EEY90307.1| penicillin-binding protein 6 [Acinetobacter lwoffii SH145]
          Length = 382

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 82/339 (24%), Positives = 142/339 (41%), Gaps = 12/339 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++ +   S     LS         Y L+D  TG ++A    +    PAS+TK+MT+Y
Sbjct: 7   LAALLLVPSFSFAATVLSAPPELNNKSYVLMDYETGQLLASKNENEKLAPASMTKMMTSY 66

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   L   +      + ++++A     S           T T    L+ +I++S ND +
Sbjct: 67  IIEQKLLSGELTEDEQVRMNESAWCRGSSAESCMYVPLNGTATALEMLRGIIIQSGNDAS 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +   E  F   MN  +K +G++ T F+N+ G+   GHY+TA+DMA L+  I  D
Sbjct: 127 KAMAEHIAGNEGTFAHMMNQEAKRIGMTNTSFVNSTGMPAEGHYSTAKDMATLAQHIIKD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +Y   +  K     G K  N N  + T    DG+KTG T  +G+ +  S+ +G   LI
Sbjct: 187 SSKYYPIYAEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKRGPTRLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISE-- 294
           +VI GA     R   +  LL+ G+ N   +              +          ++E  
Sbjct: 247 SVIFGAPTMQERATQTRELLAWGYANFETKNVQPAKQVLAKAKVWFGKEDEVQIGLAENF 306

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            V   + +     TQ+     +       +   ++   +
Sbjct: 307 NVTMPKGQANAIKTQLVV---QPKLTAPLQPGQVVGKYV 342


>gi|114771313|ref|ZP_01448733.1| D-alanyl-D-alanine carboxypeptidase family protein [alpha
           proteobacterium HTCC2255]
 gi|114548238|gb|EAU51125.1| D-alanyl-D-alanine carboxypeptidase family protein [alpha
           proteobacterium HTCC2255]
          Length = 481

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 100/322 (31%), Positives = 156/322 (48%), Gaps = 10/322 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
             + + ++       +           ++D  TG V+     D   +PASLTK+MT Y+ 
Sbjct: 9   FFLVVVLIFTGVSAYAAP-----YAALVMDARTGEVLHSRNADTRLHPASLTKMMTLYLA 63

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  ++     L   + +S+NA+  PPS    + G  + + + ++   VKSAND A A+ E
Sbjct: 64  FKAVESGHLSLDEKVKVSRNAASEPPSKLGLRTGMRVKVRHLIRAAAVKSANDAATALGE 123

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           ++  +E KF   M   +K LG+  T F NAHG+   GH +TARDM+IL   +  DFP Y 
Sbjct: 124 AIAGSEAKFTALMTAQAKALGMKRTTFKNAHGLTARGHLSTARDMSILGRHLMYDFPDYY 183

Query: 186 HYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           + F  +  +   +  PNTN   +  + GADG+KTG+T A+GFN+V+SA +G++ +IA + 
Sbjct: 184 NLFSRRNTDAGLRTVPNTNRRLLANYKGADGIKTGYTNAAGFNLVSSAQRGNKRIIATVF 243

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G     +RN   A LL MGF     R   N I     + N  + V  I     + +    
Sbjct: 244 GGRTWRSRNARVAELLDMGFNRTPKRYTSNAIPARPSRGNQLDSVALILPGNVSIK---- 299

Query: 305 NYNTQMKEAKDKESHFIDFEKI 326
           +        K K     D + I
Sbjct: 300 SPRIISSSPKPKFRPNFDKKTI 321


>gi|22125078|ref|NP_668501.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis KIM
           10]
 gi|45440942|ref|NP_992481.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108808491|ref|YP_652407.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis
           Antiqua]
 gi|108811250|ref|YP_647017.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis
           Nepal516]
 gi|145599915|ref|YP_001163991.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis
           Pestoides F]
 gi|149365498|ref|ZP_01887533.1| putative penicillin-binding protein 5 [Yersinia pestis CA88-4125]
 gi|162419741|ref|YP_001606339.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis
           Angola]
 gi|165937675|ref|ZP_02226237.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008297|ref|ZP_02229195.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|167398703|ref|ZP_02304227.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167423578|ref|ZP_02315331.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167468426|ref|ZP_02333130.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis FV-1]
 gi|170025245|ref|YP_001721750.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           pseudotuberculosis YPIII]
 gi|186894472|ref|YP_001871584.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929682|ref|YP_002347557.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia pestis
           CO92]
 gi|229838147|ref|ZP_04458306.1| putative penicillin-binding protein 5 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895938|ref|ZP_04511108.1| putative penicillin-binding protein 5 [Yersinia pestis Pestoides A]
 gi|229898742|ref|ZP_04513887.1| putative penicillin-binding protein 5 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901487|ref|ZP_04516609.1| putative penicillin-binding protein 5 [Yersinia pestis Nepal516]
 gi|270489672|ref|ZP_06206746.1| serine-type D-Ala-D-Ala carboxypeptidase [Yersinia pestis KIM D27]
 gi|294504405|ref|YP_003568467.1| putative penicillin-binding protein 5 [Yersinia pestis Z176003]
 gi|21957931|gb|AAM84752.1|AE013720_16 D-alanyl-D-alanine carboxypeptidase, fraction A [Yersinia pestis
           KIM 10]
 gi|45435801|gb|AAS61358.1| putative penicillin-binding protein 5 [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774898|gb|ABG17417.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Yersinia pestis Nepal516]
 gi|108780404|gb|ABG14462.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Yersinia pestis Antiqua]
 gi|115348293|emb|CAL21224.1| putative penicillin-binding protein 5 [Yersinia pestis CO92]
 gi|145211611|gb|ABP41018.1| penicillin-binding protein 5 [Yersinia pestis Pestoides F]
 gi|149291911|gb|EDM41985.1| putative penicillin-binding protein 5 [Yersinia pestis CA88-4125]
 gi|162352556|gb|ABX86504.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Angola]
 gi|165914425|gb|EDR33040.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165992679|gb|EDR44980.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|167051207|gb|EDR62615.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167057748|gb|EDR67494.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751779|gb|ACA69297.1| Serine-type D-Ala-D-Ala carboxypeptidase [Yersinia
           pseudotuberculosis YPIII]
 gi|186697498|gb|ACC88127.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681416|gb|EEO77510.1| putative penicillin-binding protein 5 [Yersinia pestis Nepal516]
 gi|229688290|gb|EEO80361.1| putative penicillin-binding protein 5 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694513|gb|EEO84560.1| putative penicillin-binding protein 5 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700861|gb|EEO88890.1| putative penicillin-binding protein 5 [Yersinia pestis Pestoides A]
 gi|262362606|gb|ACY59327.1| putative penicillin-binding protein 5 [Yersinia pestis D106004]
 gi|270338176|gb|EFA48953.1| serine-type D-Ala-D-Ala carboxypeptidase [Yersinia pestis KIM D27]
 gi|294354864|gb|ADE65205.1| putative penicillin-binding protein 5 [Yersinia pestis Z176003]
 gi|320016196|gb|ADV99767.1| putative penicillin-binding protein 5 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 400

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 29  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADTRRNPASLTKMMTSYVIGQAIKSGK 88

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 89  IGAEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 148

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 149 AGSQDSFVNLMNNYVKALGLQNTHFKTVHGLDAEGQFSSARDMALIGQALIRDVPDEYAI 208

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+V+LG 
Sbjct: 209 YKEKEFTFNNIRQTNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISVVLGG 268

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++   T   
Sbjct: 269 HTFKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDAYLTIPR 328

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++   
Sbjct: 329 GRMKDLKASYVLNTPEIHAPLAKNQVVGTI 358


>gi|307266908|ref|ZP_07548427.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306918065|gb|EFN48320.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 421

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 26/356 (7%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +     + I +A ++ I+  +        P   L+D  TG V+ +        PAS
Sbjct: 1   MKKIIACLLTLFILVAQITPIYANVPPPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++TA +           L   +T S N ++   ++     G  +TL+  L  L+++S
Sbjct: 61  TTKILTAIIAIEK-----GNLNDIVTASDNVTKIDGNSIFLSPGEQLTLEQLLYALLLES 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+AIAE +  + + F + MN  +K +G   +HF+N +G+    HY+T  DMA+++ 
Sbjct: 116 ANDAAIAIAEHIGGSIENFAKMMNEKAKEIGAYDSHFVNPNGLPDENHYSTPYDMALIAR 175

Query: 176 RIKTDFP--------QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASG 225
               +           Y      K  +++     N     +   + GADG+KTG+T A+G
Sbjct: 176 YAMQNPEFRKIVTTIHYQIPPTNKFDKVRDLWLSNRLIKPSSFHYEGADGVKTGYTVAAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--Q 283
             +VASA +    LI+VI+G    N     +  LL  GF N T  KK        Y    
Sbjct: 236 QVLVASATRDGHRLISVIMGDQGTNI-WTDTIKLLDYGFQNFTLVKKTEKGEVVTYIDLG 294

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               ++P I++E       + +  +  TQ+   K+  +     + +  +K  + +K
Sbjct: 295 KSHFKLPLIAKEDFYYEVPKGQENSIETQIILNKNINAPINKGDTLGYIKYTLNEK 350


>gi|283784410|ref|YP_003364275.1| penicillin-binding protein 5 (D-alanyl-D-alanine carboxypeptidase)
           [Citrobacter rodentium ICC168]
 gi|282947864|emb|CBG87425.1| penicillin-binding protein 5 (D-alanyl-D-alanine carboxypeptidase)
           [Citrobacter rodentium ICC168]
          Length = 403

 Score =  197 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADTRRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +TI  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVTALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSV 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTAKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 272 RTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGDTDRASLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYLLNTTELHAPLQKNQVVGTI 361


>gi|146343356|ref|YP_001208404.1| putative D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium sp.
           ORS278]
 gi|146196162|emb|CAL80189.1| putative D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium sp.
           ORS278]
          Length = 476

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 170/323 (52%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R       + +++     +            L++ +TG V+      +PW PAS+TKLM
Sbjct: 4   LRLLFRYSPLKIIAVAAALMLAPRMAHAEALLLVEADTGKVLEAQNATYPWYPASVTKLM 63

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV    +K+ KA L T +T+S  A+   PS   ++ G+ +T+DNALK+++VKSAND+A
Sbjct: 64  TAYVTLKAVKDGKASLDTLLTVSPTAASQSPSKMGYRPGTQVTVDNALKMMLVKSANDMA 123

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           V +AE +  +   F   MN T++ LG++ T ++N +G+   G  T+ARD+AIL+  I  D
Sbjct: 124 VVLAEGIGGSIDGFSIMMNETAQRLGMTQTSYVNPNGLPADGQITSARDLAILARAIIRD 183

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            P+Y ++  I  +    +   N N  +G + GADG KTGF CASG+N+VASA +  + LI
Sbjct: 184 LPEYEYFVHIPSIRYGRRVVQNFNRLIGRYPGADGFKTGFICASGYNLVASATRNGKRLI 243

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV+LGA     R   +  +L  GF           +        +    PN+ +++C+ +
Sbjct: 244 AVVLGASSGQMRAVRAIQMLDRGFNTNQLSWLKAPLGNVEQLVPVDATPPNLRDDMCSGR 303

Query: 301 KEIINYNTQMKEAKDKESHFIDF 323
           +     +   +EA ++       
Sbjct: 304 RHRPASDDDGEEASNEGETTTGG 326


>gi|167745582|ref|ZP_02417709.1| hypothetical protein ANACAC_00273 [Anaerostipes caccae DSM 14662]
 gi|317472823|ref|ZP_07932134.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
 gi|167654894|gb|EDR99023.1| hypothetical protein ANACAC_00273 [Anaerostipes caccae DSM 14662]
 gi|316899742|gb|EFV21745.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
          Length = 394

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 33/365 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAEN 45
           M++  + I   +L      +  A                        +++  +G ++ + 
Sbjct: 1   MKKAAIFILSLLLCISSGTMVCATEPETLLTVAQDGEGLDLTAKSAVVMEAGSGTILYQK 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D    PAS+TK+M+  ++F  L +     +  +T+S++A+    S    + G + T+D
Sbjct: 61  DKDMKLPPASVTKVMSLLLIFEELDKGNLKYSDKVTVSEHAASMGGSQVFLEPGESQTVD 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             LK +++ SAND  V++AE +  +E  FV+ MN  +K LG+  T F N+ G+   GH T
Sbjct: 121 TMLKCIVISSANDAVVSMAEHIAGSEGAFVKRMNEKAKQLGMKNTTFKNSCGLDIKGHET 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADGMK 217
           +A D+A++S  + T  P    Y +I   +   +           NTN  +  + G  G+K
Sbjct: 181 SAYDIALMSRELTTKHPDIFKYTKIWMDKFTHETKKGTKEFGLSNTNKLLKQYNGCTGLK 240

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK------TDRK 271
           TG T  + F + A+A +   SLIAV++ + D  TR K +++LL  GF +       T  K
Sbjct: 241 TGSTSTAKFCLSATATRNGVSLIAVVMASDDSKTRVKDASALLDYGFSHCQVMEDHTKAK 300

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
            I  I     ++   +   +I  ++   +    +   Q++  + K       +K  +L  
Sbjct: 301 DIGKIAVTKGKKETVSYQEDIPAKIVLVKGSKNDVKKQIRIGQVK----APVKKGQVLGY 356

Query: 332 KITKK 336
            I K+
Sbjct: 357 IIYKR 361


>gi|260434140|ref|ZP_05788111.1| beta-lactamase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417968|gb|EEX11227.1| beta-lactamase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 388

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 148/320 (46%), Gaps = 8/320 (2%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D  TG V+     D P  PAS++KLMT YV F  L++ +  L   + +S
Sbjct: 24  FDTSARAAYVMDQTTGTVLLSKNADQPLPPASMSKLMTLYVAFEALRDGRLTLDEKLPVS 83

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFVQHMNNT 141
           ++A  Y  S         + +++ L+ +IV S ND  V IAE+L     E  F ++M   
Sbjct: 84  EHAMSYGGSTMFLNTQDRVRVEDLLRGIIVLSGNDACVVIAEALSPDGTEAGFARYMTQR 143

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK---GK 198
           +K +G++ + F N++G    GH  + +D+AIL+ R+ TDFP+Y   F  +  E       
Sbjct: 144 AKQMGMNNSTFANSNGWPAAGHMMSVKDLAILADRLITDFPEYYPLFAEETFEFDGRAPS 203

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              N N  +   +GADG+KTG T  +G+ +V SA QGD+ +I V+ G  +   R + + +
Sbjct: 204 NVNNRNPLLKLDIGADGLKTGHTQEAGYGLVGSAKQGDRRVIFVLSGLENVARRAEEAEA 263

Query: 259 LLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           +++  F N  +R   +    I +          V  + E   T    ++N      E   
Sbjct: 264 VVNWSFRNFVERTVASADTPIAQAKVWMGAQKTVGLVPEGDLTLLFPVLNDQNVPAEVVY 323

Query: 316 KESHFIDFEKITLLKNKITK 335
           +       +K   L   + K
Sbjct: 324 EGPINAPIQKGQKLAELVVK 343


>gi|326389891|ref|ZP_08211455.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994159|gb|EGD52587.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 421

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 26/356 (7%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +     + I +A ++ I+  +        P   L+D  TG V+ +        PAS
Sbjct: 1   MKKIIACLLTLFILVAQITPIYANVPPPPEIVGPTAVLMDFTTGQVLYDKNMHKRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++TA +           L   +T S N ++   ++     G  +TL+  L  L+++S
Sbjct: 61  TTKILTAIIAIEK-----GNLNDIVTASDNVTKIDGNSIFLSPGEQLTLEQLLYALLLES 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+AIAE +  + + F + MN  +K +G   +HF+N +G+    HY+T  DMA+++ 
Sbjct: 116 ANDAAIAIAEHIGGSIENFAKMMNEKAKEIGAYDSHFVNPNGLPDENHYSTPYDMALIAR 175

Query: 176 RIKTDFP--------QYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASG 225
               +           Y      K  +++     N     +   + GADG+KTG+T A+G
Sbjct: 176 YAMQNPEFRKIVTTIHYQIPPTNKFDKVRDLWLSNRLIKPSSFHYEGADGVKTGYTVAAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--Q 283
             +VASA +    LI+VI+G    N     +  LL  GF N T  KK        Y    
Sbjct: 236 QVLVASATRDGHRLISVIMGDQGTNI-WTDTIKLLDYGFQNFTLVKKTEKGEVVTYIDLG 294

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               ++P I++E       + +  +  TQ+   K+  +     + +  +K  + +K
Sbjct: 295 KSHFKLPLIAKEDFYYEVPKGQENSIETQIILNKNINAPINKGDTLGYIKYTLNEK 350


>gi|300717466|ref|YP_003742269.1| penicillin-binding protein 6B (D-alanyl-D-alanine carboxypeptidase)
           [Erwinia billingiae Eb661]
 gi|299063302|emb|CAX60422.1| Penicillin-binding protein 6B (D-alanyl-D-alanine carboxypeptidase)
           [Erwinia billingiae Eb661]
          Length = 379

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 15/342 (4%)

Query: 6   VIIAMAMLS----NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +++A A L+    N   F     +     + L+D  TG V+ +   D   NPASLTKLMT
Sbjct: 1   MVLAFASLAHADDNPLAFPMTPPSVDAASWVLMDATTGQVLTQGNADERRNPASLTKLMT 60

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKS 115
            YVV   +  K+      +TI ++A                K G  +++ +  + +I+ S
Sbjct: 61  GYVVDRAIDAKRITRDDMVTIGQDAWGAGNPVFKGSSLMFLKPGEKVSVRDLSRGVIIDS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  VA+A+ +  ++  FV  MN     LGL+ THF   HG+   G +TTA D+A LS 
Sbjct: 121 GNDACVALADYVAGSQSAFVDQMNQYVTKLGLTNTHFETVHGLDAPGQFTTAGDLAKLSR 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            I +  P +   +  K L   G    N N       L  DG+KTG T ++GFNI+AS++ 
Sbjct: 181 AIISGEPDFYQMYGEKSLTWNGITQQNRNGLLWDKTLHVDGLKTGHTESAGFNIIASSVD 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVP 290
           G + LIAVI+G      R + +  LL+ G  N    +  +       ++ +  N      
Sbjct: 241 GQRRLIAVIMGGKSTKGREEQARKLLTWGQNNFDTVQLFHAGKEIGHENVWYGNPHQVSV 300

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              ++V            + K   D++      +    + + 
Sbjct: 301 GSDKDVYLALPRDEVKKIKAKYVIDRKDLEAPLKAHEQVGSI 342


>gi|217976731|ref|YP_002360878.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocella silvestris
           BL2]
 gi|217502107|gb|ACK49516.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocella silvestris
           BL2]
          Length = 407

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R   + I   +     P  + A    +P+  L+D  TG V+ E   D P  PAS  K+M
Sbjct: 11  LRLMGLAILAGVCFGSGPASAQAIQTSVPHAILIDVETGSVLFEKDADAPVTPASTVKVM 70

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKS 115
           TA VVF  L + +  L    TIS++A          S+      S + +++ ++ L++ S
Sbjct: 71  TADVVFGELAQGRIKLDDEFTISEHAWRTGGAPARASSMFAALNSRVRVEDLIRGLVIDS 130

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND A+A+AE +  +E  F   M      LGL+ + F N  G        T R+M IL+ 
Sbjct: 131 GNDAAIALAEGVAGSETAFAGLMMKRGHELGLTRSVFTNPWGKDDPEQKVTPREMTILAA 190

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +   +P Y  YF  K       +  N N  +   +GADG+KTG   ASGF +V SA+Q 
Sbjct: 191 HVIATYPDYYKYFGEKEFTWNKIRQTNRNPLLTMDIGADGLKTGNIDASGFGLVGSAVQN 250

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------V 289
            Q LI  + GA     R + +  L    F + + +   +      Y +           V
Sbjct: 251 GQRLILALYGATTAKERAEEARKLFLWAFRSFSSKSLFSADETIGYAKVYGGASFEAPLV 310

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                +    +     +  ++       +     +++  LK
Sbjct: 311 AGREVKALVPRVGGEKFTGRIVYNGPLIAPVEAGKEVARLK 351


>gi|258515293|ref|YP_003191515.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778998|gb|ACV62892.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 392

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 84/345 (24%), Positives = 139/345 (40%), Gaps = 12/345 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE--------TNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           F++I A+ ++S      +                   L++ NTG ++    PD     AS
Sbjct: 12  FVIISAICIVSKPGTIQAKPAVQNNEAGLETTAEAAILMEANTGKILWSKQPDKELPMAS 71

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  +    +   K  LT  IT S+NA     S    + G  ++++  L  + V S
Sbjct: 72  VTKIMTMLLAVEAVDAGKVKLTDKITTSENAWNMGGSQIYLEPGEELSMEEMLISIAVGS 131

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND  VA+AE L  +E+ FV  MN  +K LGL+ T+F N +G+    HYT+A DMA++  
Sbjct: 132 ANDACVAVAEHLGGSEEAFVGMMNKKAKELGLAHTNFANTNGLPVENHYTSAHDMAMIIK 191

Query: 176 RIKTDFPQYMHYFQIKGL-EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                          +           NTN  +  + G    KTG+T  + + + ++  +
Sbjct: 192 EALRHPLFVKVSSIYRYDLRGGDFVLWNTNKLLKWYEGTVAGKTGWTNEAKYCLASAVER 251

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPN 291
               LIAV+LG  +  +  + S  L + GF         N  IK       +     V  
Sbjct: 252 KGLRLIAVVLGTAEPKSHFRESMKLYNYGFARYQAVNLENQGIKVKTVNVGKGTDRVVDI 311

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++ E  +            K+    +      +K   +   I  K
Sbjct: 312 VTAEKVSLVVPKGQDKGYEKKIMAPDLINAPVQKGDKVGKYIVAK 356


>gi|254360903|ref|ZP_04977049.1| S11 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
           haemolytica PHL213]
 gi|153092382|gb|EDN73445.1| S11 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
           haemolytica PHL213]
          Length = 392

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 18/353 (5%)

Query: 1   MRQFLV----IIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ LV    ++  A+ S  +      F   A       Y L+D N+G V+    PD   
Sbjct: 1   MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMDYNSGEVLVSLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MT+YVV   LK  K   +  + +++N+                S +++   +
Sbjct: 61  YPASLTKMMTSYVVGEALKSGKVQNSDMVIVTENSWAQKFPGSSLMFLDLNSKVSVGELM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K LI+ S ND +VA+AE +  ++  F+  MN  ++  GL  THF   HG+     Y++AR
Sbjct: 121 KGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLKNTHFTTVHGLDDPEQYSSAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   I  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNGLLWDKTIQVDGMKTGHTDKAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQ 282
           N+VASAI  +  LI+V++G      R   S  LL  GF N    K I        +  Y 
Sbjct: 241 NLVASAINPNTRLISVVMGVPTYKGREVESKKLLQWGFANFETIKSIPAAQSVAEQSVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             ++       ++   T  +  + + + +   +K++      K  ++   I +
Sbjct: 301 GEVNKVQLGSVQDSFVTIPKGRSADLKARYELEKKNLEAPLAKGQVVGKMIYQ 353


>gi|295096612|emb|CBK85702.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 403

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADARRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +TI  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  +HF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVSALGLKNSHFQTVHGLDAEGQYSSARDMALIGQALIRDVPNEYSI 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQTNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + +++  T   
Sbjct: 272 RTFKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPVWFGDNDRASLGVDKDLYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYVLNTTELHAPLQKNQVVGTI 361


>gi|88810567|ref|ZP_01125824.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrococcus mobilis
           Nb-231]
 gi|88792197|gb|EAR23307.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrococcus mobilis
           Nb-231]
          Length = 340

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 93/309 (30%), Positives = 148/309 (47%), Gaps = 6/309 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D ++  V+ E   D   +PASLTK+MTAYVVFS LK K   +   +T+S+ A   P S 
Sbjct: 1   MDHDSNQVLVEVNVDKRHDPASLTKMMTAYVVFSELKSKHIAIDDQVTVSEKAWREPGSR 60

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G  + +   L+ +IV+S ND +VA+AE +   E  F Q MN  ++ LG+  TH++
Sbjct: 61  MFIEVGDKVPVKALLQGMIVQSGNDASVALAEHVAGNESTFAQVMNQYARTLGMEHTHYV 120

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           NA G+    HYTTA D A+LS  +  DFPQY   F  K     G +  N N  +      
Sbjct: 121 NATGLPDPKHYTTAHDTALLSQALMRDFPQYHSMFAEKKYTYNGIEQYNRNKLLWRDPSV 180

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTG T A+G+ + +SA + +  LI+V++GA     R   + +LL+ GF         
Sbjct: 181 DGLKTGHTEAAGYCLASSAERDNMRLISVVMGAGSEEARLSDTQALLNYGFRFFKTHLLY 240

Query: 274 NYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                      ++  L      ++ +  V   + +  N    M       +     E+  
Sbjct: 241 QAGQSLTKARVWKGALEMLPLGLTHDLFVTIPEHQYDNLKASMNVDNLLMAPVTRGEQYG 300

Query: 328 LLKNKITKK 336
            +  ++  +
Sbjct: 301 KVNVQLNGQ 309


>gi|261493869|ref|ZP_05990381.1| S11 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261495135|ref|ZP_05991599.1| S11 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261309205|gb|EEY10444.1| S11 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261310471|gb|EEY11662.1| S11 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 392

 Score =  197 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 18/353 (5%)

Query: 1   MRQFLV----IIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ LV    ++  A+ S  +      F   A       Y L+D N+G V+    PD   
Sbjct: 1   MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMDYNSGEVLVSLNPDQRQ 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNAL 108
            PASLTK+MT+YVV   LK  K   +  +T+++N+                S +++   +
Sbjct: 61  YPASLTKMMTSYVVGEALKSGKVQNSDMVTVTENSWAQKFPGSSLMFLDLNSKVSVGELM 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K LI+ S ND +VA+AE +  ++  F+  MN  ++  GL  THF   HG+     Y++AR
Sbjct: 121 KGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLKNTHFTTVHGLDDPEQYSSAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTN-WAVGTFLGADGMKTGFTCASGF 226
           DMAI+   I  D P+    +  K  +   KK  PN N       +  DGMKTG T  +G+
Sbjct: 181 DMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNGLLWDKTIQVDGMKTGHTDKAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQ 282
           N+VASAI  +  LI+V++G      R   S  LL  GF N    K I        +  Y 
Sbjct: 241 NLVASAINPNTRLISVVMGVPTYKGREVESKKLLQWGFANFETIKSIPAAQSVAEQSVYY 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             ++       ++   T  +  + + + +   +K++      K  ++   I +
Sbjct: 301 GEVNKVQLGSVQDSFVTIPKGRSADLKARYELEKKNLEAPLAKGQVVGKMIYQ 353


>gi|309389989|gb|ADO77869.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halanaerobium praevalens
           DSM 2228]
          Length = 378

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 155/343 (45%), Gaps = 14/343 (4%)

Query: 1   MRQ----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++    ++++I + M+  I P    A   K     L++  TG V+ E   D    PAS+
Sbjct: 1   MKKNNVLYILLITIFMVLTILPTT-FAFDIKPESAFLIEAETGQVLFEKNADRKLPPASM 59

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+M   +    L+E    LT  +TIS+ A     S       + + L+  +K + + S 
Sbjct: 60  TKIMPLLITMEKLEEGSISLTDQVTISRYAESMGGSQIFLAANTQVELEKLIKAVTIASG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND +VAI E +  T   F+  MN  ++ LG+ +T+F N+ G+    HY+TA D++I++  
Sbjct: 120 NDASVAIGEYIAGTYSNFIAMMNERAEELGMDSTNFSNSTGLPTTNHYSTAHDISIMARE 179

Query: 177 IKTDFPQYMH---YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +            + +   L  +     NTN  +  +   DG+KTG T  +G+ + A+A 
Sbjct: 180 LVKHSQVLHWASIWTETIDLPNRKAMLVNTNSLINKYPSMDGLKTGHTQEAGYCLTATAK 239

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEV 289
           +GD  LI+V++       R + +  LL  GF + + RK  N   +    +         V
Sbjct: 240 KGDVRLISVVMQGETLTAREEATTRLLDYGFNSFSKRKIANSGEQIQNIEVANSANKVAV 299

Query: 290 PNISEEVCTTQKEII--NYNTQMKEAKDKESHFIDFEKITLLK 330
             I+E++    ++      + +++      +     E I  LK
Sbjct: 300 GEIAEDLSIMVQKGKENEISQKVEVNDSLTAPIAKGETIGHLK 342


>gi|270263700|ref|ZP_06191969.1| hypothetical protein SOD_e03250 [Serratia odorifera 4Rx13]
 gi|270042584|gb|EFA15679.1| hypothetical protein SOD_e03250 [Serratia odorifera 4Rx13]
          Length = 428

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   LK  K
Sbjct: 57  VNIKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADARRDPASLTKMMTSYVIGQALKAGK 116

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ ++A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 117 IGPEDMVTVGQDAWATGNPVFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 176

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN     LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 177 AGSQDAFVNLMNTYVSKLGLQNTHFQTVHGLDAQGQYSSARDMALIGQALIRDVPDEYAI 236

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA +G   LI+ +LG 
Sbjct: 237 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATEGQMRLISAVLGG 296

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 297 RTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVELGVDKDVYLTIPR 356

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++ + 
Sbjct: 357 GRMKDLKASYVLNTPEIHAPLAKNQVVGSI 386


>gi|238795411|ref|ZP_04638926.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia mollaretii ATCC
           43969]
 gi|238720530|gb|EEQ12331.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia mollaretii ATCC
           43969]
          Length = 383

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 87/328 (26%), Positives = 140/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 12  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 71

Query: 74  AMLTTPITISKNAS------EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A           S    K G  + +    + + ++S ND  VA+A+ +
Sbjct: 72  IGPEDMVTVGKDAWATGNPEFQGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 131

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN    LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 132 AGSQDSFVNLMNNYVNALGLQNTHFKTVHGLDADGQFSSARDMALIGQALIRDVPDEYTI 191

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T ++G+N+VASA  G   LI+ +LG 
Sbjct: 192 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTASAGYNLVASATDGQMRLISAVLGG 251

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 252 RTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDVYLTIPR 311

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 312 GRMKDLKASYVLNTPEIHAPLAKNQVVG 339


>gi|310767134|gb|ADP12084.1| D-alanyl-D-alanine carboxypeptidase [Erwinia sp. Ejp617]
          Length = 402

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 11/325 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +  A       + L+D ++  V+AE+  D   +PASLTK+M++YV+   LK  K     
Sbjct: 32  QMPAAPQIDAKAWILMDYSSSKVLAESNADLRLDPASLTKMMSSYVIGQALKAGKIGKDD 91

Query: 79  PITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +T+ K+A                K G  + +    K ++++S ND ++A+A+ +  ++ 
Sbjct: 92  LVTVGKDAWATGNPVLKGSSLMFLKPGDHIAVSELNKGIVIQSGNDASIALADYVAGSQD 151

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  MNN  + LGL  THF   HG+   G Y+TARDMA++   +  D P      + K 
Sbjct: 152 AFVGLMNNYVQALGLKNTHFKTVHGLDASGQYSTARDMALIGQALIRDVPDEYALHKEKV 211

Query: 193 LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 +  N N     T L  DG+KTG T  +G N+VASA+ GD+ +I+V+LGA     
Sbjct: 212 FTFNNIRQYNRNRLLWSTSLQVDGIKTGHTSGAGNNLVASAVDGDRRMISVVLGAATDAI 271

Query: 252 RNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + S  LL+ G  N      +        +  +  +       ++++   T       N
Sbjct: 272 RFRESEKLLTWGLRNFETVTPVKAGKAFVTQRVWYGDRQEVNLGVAQDAAITLPHGQMKN 331

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +      +        K  ++   
Sbjct: 332 LKASFTLSQPQLTAPLAKNQVVGTL 356


>gi|99078561|ref|YP_611819.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruegeria sp. TM1040]
 gi|99035699|gb|ABF62557.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruegeria sp. TM1040]
          Length = 393

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 82/335 (24%), Positives = 142/335 (42%), Gaps = 8/335 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +   +          A   K     ++D  T  V+     D P  PAS++KLMT YV F 
Sbjct: 13  VLAGLWIASSTTAVQAFETKARAAYVVDQGTNTVLLSKNADVPMPPASMSKLMTLYVAFE 72

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +++ +  +   + +S++A  Y  S         + +++ L+ +IV S ND    IAE+L
Sbjct: 73  AVRDGRLTMDERLPVSEHAMSYKGSTMFLDTTDRVRVEDLLRGIIVLSGNDACAVIAEAL 132

Query: 128 CKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
                E  F ++M   ++ LG++ + FMN++G    GH  + RD+AIL+  +  DFP++ 
Sbjct: 133 SPDGTEAGFARYMTRRARELGMNDSTFMNSNGWPDDGHRMSVRDLAILAEHLIEDFPEFY 192

Query: 186 HYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             F  +  E          N N  +   +GADG+KTG T  +G+ +V SA QGD+ +I V
Sbjct: 193 PMFAEQVFEFDGRAPSNTRNRNPLLQLDIGADGLKTGHTQEAGYGLVGSAKQGDRRVIFV 252

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTT 299
           I G      R + S ++++  F   T +          +       S  V  +  E    
Sbjct: 253 ISGLNSTPERAEESEAIVNWSFRQFTKKTIAREGIAVEQAEVWMGDSPTVGLVPAEDLEI 312

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               ++ +    E           +    L   + 
Sbjct: 313 LLPALSDDAVKAEVVYTGPVTAPIQAGQQLAELVV 347


>gi|238753434|ref|ZP_04614797.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia ruckeri ATCC
           29473]
 gi|238708387|gb|EEQ00742.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia ruckeri ATCC
           29473]
          Length = 401

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 93/344 (27%), Positives = 155/344 (45%), Gaps = 14/344 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ + M +        A       Y L+D N+G ++ +   D   +PASLTK+M++YV+ 
Sbjct: 19  LLLLTMPAVRAADEQPAPPIDAKAYVLMDFNSGKILTQGNADQRLDPASLTKIMSSYVIG 78

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +K  K      +T+ K+A                K G  + L +  K ++++S ND +
Sbjct: 79  QAIKAGKVHPDDMVTVGKDAWATGNPVLRGSSLMFLKPGDQVKLLDLNKGIVIQSGNDAS 138

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+A+ +  ++  FV  MNN +K LGL  THF+  HG+   G Y+TARDMA+L+  +  D
Sbjct: 139 IALADYIAGSQDSFVGLMNNYAKALGLDNTHFLTVHGLDAEGQYSTARDMAVLAQALIRD 198

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+     + K       +  N N     T L  DG+KTG T  +G N+VASA  G   L
Sbjct: 199 VPEEYALHKEKEFTFNNIRQINRNRLLWNTNLNVDGVKTGHTAGAGHNLVASATDGPMRL 258

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI------S 293
           I+V+LGA     R   S  LLS GF        I        Q+    ++  +      +
Sbjct: 259 ISVVLGAPSDRVRFSESEKLLSWGFRFYETVVPIKTDKAFVTQKVWFGDIGQVDLGVAQN 318

Query: 294 EEVCTTQKEIINYNTQMKEAKD-KESHFIDFEKITLLKNKITKK 336
             +   + ++ N     K       +     +K+ ++  ++  K
Sbjct: 319 AAITIPKGQMKNLKASYKLDSTELRAPLAKHQKVGVIDFQLNGK 362


>gi|238752594|ref|ZP_04614067.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia rohdei ATCC
           43380]
 gi|238709185|gb|EEQ01430.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia rohdei ATCC
           43380]
          Length = 383

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 87/328 (26%), Positives = 139/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 12  VNLKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADTRRNPASLTKMMTSYVIGQAIKAGK 71

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 72  IGPEDMVTVGKDAWATGNPEFRGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 131

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN    LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 132 AGSQDSFVNLMNNYVNALGLKNTHFKTVHGLDADGQFSSARDMALIGQALIRDVPDEYAI 191

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 192 YKEKEFTFNNIRQTNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATDGQMRLISTVLGG 251

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 252 HTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDVYLTIPR 311

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 312 GRMKDLKASYTLNTPEIHAPLAKNQVVG 339


>gi|188533505|ref|YP_001907302.1| D-alanyl-D-alanine carboxypeptidase [Erwinia tasmaniensis Et1/99]
 gi|188028547|emb|CAO96409.1| Penicillin-binding protein 6B precursor (D-alanyl-D-alanine
           carboxypeptidase) [Erwinia tasmaniensis Et1/99]
          Length = 383

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 155/346 (44%), Gaps = 17/346 (4%)

Query: 1   MRQFL---VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M+++L     + +++                  + L+D  TG ++    PD   NPASLT
Sbjct: 1   MKKYLPTSFTLLISLYGVAHAAEVTPPVIDAASWVLMDATTGQILTSGQPDERRNPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   + +K+      +T+ K+A                K G  +++ +  + +
Sbjct: 61  KLMTGYVVDRAIDQKRITRDDVVTVGKDAWAAGNPVFKGSSLMFLKPGEKVSVRDLSRGV 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           I+ S ND  VA+A+ +  ++  FV  MN+  + LGLS THF   HG+   G +TTARD+A
Sbjct: 121 IIDSGNDACVALADYVAGSQNNFVSMMNHYVEKLGLSNTHFETVHGLDAPGQFTTARDLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVA 230
            LS  I +  P +   +  K L   G    N N  +       DG+KTG T ++GFNI+A
Sbjct: 181 TLSRAIISGEPDFYQMYSEKSLTWNGITQQNRNGLLWDKELHVDGLKTGHTESAGFNIIA 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLS 286
           S++ G + LIAV++G      R + +  LL  G       +  +       ++ +  N  
Sbjct: 241 SSLDGQRRLIAVVMGGKSPKGREEQARQLLLWGQRYFDTVQLFHAGKEIGNENVWYGNPH 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF---EKITLL 329
                  ++V  T         + K   ++++        E++ ++
Sbjct: 301 RVALGSDKDVFYTLPRDEVQQVKAKYVIERKNLEAPIQLHEQVGVI 346


>gi|261868788|ref|YP_003256710.1| DacC protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|293391084|ref|ZP_06635418.1| DacC protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|261414120|gb|ACX83491.1| DacC protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|290951618|gb|EFE01737.1| DacC protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 396

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 98/340 (28%), Positives = 151/340 (44%), Gaps = 9/340 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L +   AM +    F           Y L+D N+G V+A   PD    PASLTK+MT+YV
Sbjct: 18  LAVSLGAMAAEDVQFNIAVPEINAQTYVLMDYNSGAVLASLNPDQRQYPASLTKMMTSYV 77

Query: 65  VFSFLKEKKAMLTTPITI---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V   +K+ K   T  +TI   S        S         +++ +  + +I+ S ND  V
Sbjct: 78  VGQAIKQGKIRNTDMVTIGESSWGHKFPGSSKMFLNLNQQVSVADLHRGIIIVSGNDACV 137

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  T   FV  MN   +  GL  T+F   HG+ +   Y++ARDMAI+  RI  D 
Sbjct: 138 AMAEHVSGTVMNFVDTMNKYVEQFGLKNTYFTTVHGLDEDNQYSSARDMAIIGARIIRDL 197

Query: 182 PQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSL 239
           P+    +  K       K PN N       +  DGMKTG T  +G+N+VASAI   +  L
Sbjct: 198 PEEYKIYAEKDFTFNKIKQPNRNGLLWDKTINVDGMKTGHTDKAGYNLVASAISPNNMRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           I+V++G      R   S  LL  GF N    K ++       +  Y  + SN    + ++
Sbjct: 258 ISVVMGVPTYKGREVESKKLLQWGFANFETFKTLDSGKSISEQRVYYGDESNIQLGVLQD 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              T  +  +   + +   +K+       K  ++   + +
Sbjct: 318 AFITIPKGKSAELKARYELEKKYLEAPLAKGQVVGKVVYQ 357


>gi|86748470|ref|YP_484966.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris HaA2]
 gi|86571498|gb|ABD06055.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris HaA2]
          Length = 499

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 106/309 (34%), Positives = 167/309 (54%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +    L+ +    ++          L++ +TG V+      +PW PAS+TK+MTAYV   
Sbjct: 13  LFWITLTALLMLTALPRIASAEALLLVEADTGKVLQAENATYPWYPASVTKIMTAYVTLK 72

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +KE +  L + +T+S  A+   PS   F  G+ +T+DNALK+++VKSANDIAV +AE +
Sbjct: 73  AVKEGRLTLDSLLTVSPVAAAQSPSKMGFAPGTLITVDNALKMMMVKSANDIAVVLAEGV 132

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +   F   MN T++ LG++ TH++N +G+   G  T+ARD+AIL+  +  D P+Y H+
Sbjct: 133 GGSVDGFSDMMNTTAQRLGMTQTHYVNPNGLPAEGQVTSARDLAILARAVLRDLPEYEHF 192

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             I  +    +   N N  +G + GADG KTGF CASG+N+VASA +  + LIAV+LGA 
Sbjct: 193 MHIPAIRFGKRVTHNFNKLIGRYPGADGFKTGFICASGYNLVASATRNGRRLIAVVLGAN 252

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               R   +A LL  GF   T       +        +    PN+ +E+C  +++    +
Sbjct: 253 SGQDRAVKAAQLLERGFSANTLAWLTPSLGTVDNLAPIDATPPNLRDEMCGPKRKRPASD 312

Query: 308 TQMKEAKDK 316
              + A   
Sbjct: 313 EDEQVASVI 321


>gi|56698478|ref|YP_168853.1| D-alanyl-D-alanine carboxypeptidase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56680215|gb|AAV96881.1| D-alanyl-D-alanine carboxypeptidase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 477

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 95/294 (32%), Positives = 145/294 (49%), Gaps = 4/294 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  L++     +      ++ A         ++D  TG V+     D   +PASLTK+MT
Sbjct: 12  RLGLILFFAIWMIAALSGVARAAP---YAAMVIDARTGEVLHATNADTRLHPASLTKMMT 68

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  ++  +  + T + I   A++ PPS    + G  +     ++   VKSAND A 
Sbjct: 69  LYIAFEAVRNGELTMDTQVRIDPFAAKEPPSKLGLRAGQKIAFRYLVRAAAVKSANDAAT 128

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +I  ++  +E  F + MN T+K LG++ T F NAHG+ + GH +TARDM  L   +  D+
Sbjct: 129 SIGIAISGSEAAFARRMNRTAKALGMTRTTFKNAHGLTESGHLSTARDMTTLGRHLLYDY 188

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           PQY + F  +      K   NTN   +  + GADG+KTG+T A+GFN+VASA +GD+ +I
Sbjct: 189 PQYYNLFSRRETSAGIKTVANTNRRLLDAYQGADGIKTGYTQAAGFNLVASAKRGDERVI 248

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           A + G      RN   A LL +GF     R  I       Y   +      +  
Sbjct: 249 ATVFGGKSSTARNAKVAELLDLGFRKAPSRAPIRRPDMPLYAGEVGESSKTVRV 302


>gi|159043222|ref|YP_001532016.1| D-alanyl-D-alanine carboxypeptidase [Dinoroseobacter shibae DFL 12]
 gi|157910982|gb|ABV92415.1| D-alanyl-D-alanine carboxypeptidase [Dinoroseobacter shibae DFL 12]
          Length = 493

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 96/278 (34%), Positives = 145/278 (52%), Gaps = 1/278 (0%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
             IIA+  +       +           ++D  TG V+     D   +PASLTK+MT Y+
Sbjct: 9   FRIIAIVCVCLGMQISAQPVQAAPYAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYI 68

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L T + ISK A+  PPS    + G  + L   ++   V+SAND A AI 
Sbjct: 69  AFEAVRMGEIGLDTKVRISKKAAAEPPSKLGLRPGQQIALRYLIRASAVRSANDAATAIG 128

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E  F + MN T+K LG+++T F NAHG+ + GH +TARDM  L   +  D+P+Y
Sbjct: 129 EAISGSEAAFARRMNRTAKALGMNSTTFKNAHGLTESGHLSTARDMTTLGRHLFYDYPEY 188

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +  +       NTN  +   + GADG+KTG+T A+GFN+VASA +G + +IA +
Sbjct: 189 YNLFSRRSTDTTMGTVANTNRRLLNAYRGADGIKTGYTRAAGFNLVASAERGQERIIATV 248

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
            G     TRN+  A LL +GF        +       Y
Sbjct: 249 FGGRSSATRNQRVAELLDLGFQRAPSVASVRKPAPPRY 286


>gi|296103402|ref|YP_003613548.1| D-alanyl-D-alanine carboxypeptidase fraction A [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057861|gb|ADF62599.1| D-alanyl-D-alanine carboxypeptidase fraction A [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 403

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADARRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +TI  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  +HF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVSALGLKNSHFQTVHGLDAEGQYSSARDMALIGQALIRDVPNEYAI 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQTNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + +++  T   
Sbjct: 272 RTFKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPVWFGDNDRASLGVDKDLYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYVLNTTELHAPLQKNQVVGTI 361


>gi|145641831|ref|ZP_01797406.1| hypothetical protein CGSHiR3021_01137 [Haemophilus influenzae
           R3021]
 gi|229846948|ref|ZP_04467054.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           7P49H1]
 gi|145273453|gb|EDK13324.1| hypothetical protein CGSHiR3021_01137 [Haemophilus influenzae
           22.4-21]
 gi|229810032|gb|EEP45752.1| penicillin-binding protein 5 precursor [Haemophilus influenzae
           7P49H1]
          Length = 393

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 9/341 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + A ++ +    F           Y L+D N+G ++    PD    PASLTK+MT+Y
Sbjct: 14  FVALSAFSVSAEDMQFGITPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           VV   LK+ K   T  +TI ++A        S       + +++ +  + +IV S ND  
Sbjct: 74  VVGVALKQGKIHNTDMVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDAT 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +      FV+ MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D
Sbjct: 134 VALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
            P+    +  K       K  N N       +  DGMKTG T  +G+N+VASA    +  
Sbjct: 194 LPEEYKIYSEKDFTFNKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISE 294
           LI+V++G      R   S  LL  GF N    K +    +      Y  + ++       
Sbjct: 254 LISVVMGVPTYKGREVESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFM 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   T  +      + +     ++      K  ++   + +
Sbjct: 314 DHFITIPKGKQSEVKARYELADKNLQAPLAKGQVIGKVVYQ 354


>gi|270261117|ref|ZP_06189390.1| hypothetical protein SOD_a03420 [Serratia odorifera 4Rx13]
 gi|270044601|gb|EFA17692.1| hypothetical protein SOD_a03420 [Serratia odorifera 4Rx13]
          Length = 401

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 89/346 (25%), Positives = 159/346 (45%), Gaps = 14/346 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +++    +++ +L+      + A          + L+D N+G ++ E   D   +PASLT
Sbjct: 10  LKKLTFSVSILLLATPAIQAAEAPAAPQVDAKAFVLMDYNSGKILTEGNADTRLDPASLT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           K+M++YV+   +K  K      +T+ K+A                K G  + +    K +
Sbjct: 70  KIMSSYVIGQAIKAGKIKPEDMVTVGKDAWATGNPALRGSSLMFIKPGDQVPVMELNKGI 129

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND ++A+A+ +  ++  FV  MNN +K+LGL  THF+  HG+   G Y+TARDMA
Sbjct: 130 VIQSGNDASIALADYVAGSQDSFVGLMNNYAKSLGLQNTHFLTVHGLDAEGQYSTARDMA 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  +  D P      + K       +  N N     + L  DG+KTG+T  +G N+VA
Sbjct: 190 LLSQALIRDVPVEYALHKEKEFTFNKIRQVNRNRLLWSSNLNVDGIKTGYTGGAGHNLVA 249

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLS 286
           SA  G   LI+V+LGA     R   S  LL+ GF        I      + +  +   ++
Sbjct: 250 SATDGPMRLISVVLGAPSDRIRFSESEKLLTWGFRFYETATPIKTDKPFVTQRVWFGEIN 309

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +    ++++   T  +    N +     ++ +      K  ++   
Sbjct: 310 DVPLGVAKDAAVTIPKGQMKNLKASYKLNQPTLEAPLAKNQVVGTI 355


>gi|85058773|ref|YP_454475.1| D-alanyl-D-alanine carboxypeptidase fraction A [Sodalis
           glossinidius str. 'morsitans']
 gi|84779293|dbj|BAE74070.1| penicillin-binding protein 5 [Sodalis glossinidius str.
           'morsitans']
          Length = 403

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 83/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+ E   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  VNLKTMIPGVPQIDAESYILIDYNSGKVLTEMNADVRRDPASLTKMMTSYVIGQAIKSGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T++K+A                K G  + +    + +I++S ND  VA+A+ +
Sbjct: 92  ITPNDVVTVNKDAWATGNPVFKGSSLMFLKPGDRVPVSQLNRGIILQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN    LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNNYVGALGLQNTHFETVHGLDAPGQFSSARDMAMIGKALIRDVPDEYAT 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     + L  DG+KTG T ++G+N+VASA +G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDSNLNVDGIKTGHTESAGYNLVASATEGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  L++ GF        +        +  +  +  +    +  +   T   
Sbjct: 272 HSMKGRENESRKLMTWGFRFFETVAPLKAGKEFAAEPVWFGDTDSVKLGVDSDAYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     D +       K   +   
Sbjct: 332 GRMKDLKASYVLDNQELHAPLAKNQRVGTI 361


>gi|113866332|ref|YP_724821.1| D-alanyl-D-alanine carboxypeptidase (serine-type) [Ralstonia
           eutropha H16]
 gi|113525108|emb|CAJ91453.1| D-Alanyl-D-alanine carboxypeptidase (serine-type) [Ralstonia
           eutropha H16]
          Length = 399

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 15/322 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + L D  +G  +A    D    PASLTKLMTAY+ F  LKEK+  L   +  +
Sbjct: 39  PQVAAKSWMLYDVTSGQALASQNADARIEPASLTKLMTAYLAFEALKEKRLTLDQAVVPT 98

Query: 84  --KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                 +   S    +    +T+ + L  LIV+S ND A+A+AE++  +E+ FV  MN  
Sbjct: 99  SVVLKVKSDESRMFIEPNKPVTVQDLLLGLIVQSGNDAALALAEAVGGSEEGFVAMMNRE 158

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ +G+  THF N  G+    HYTTA D+A L+ R+  DFP+Y   +  K       + P
Sbjct: 159 AQRMGMKNTHFTNTDGIPDPNHYTTAVDLATLTTRLIKDFPEYYAMYSQKEFTYNKIRQP 218

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNK 254
           N N  +      DG+KTG T ++G+ +++SA +       G + LI++++G      R +
Sbjct: 219 NRNRLLYIDPTVDGVKTGHTKSAGYCLISSAKRPLANVPDGSRRLISIVIGTTTEQVRTQ 278

Query: 255 VSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNT 308
            S  +L+ GF      +  +        D Y+         +  E  V   +        
Sbjct: 279 ESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKSGTVKIGVQNETFVTVPKGTGGRLKP 338

Query: 309 QMKEAKDKESHFIDFEKITLLK 330
            ++  +   +     +++ ++K
Sbjct: 339 VLERQELLIAPISAGQQVGMVK 360


>gi|262274734|ref|ZP_06052545.1| D-alanyl-D-alanine carboxypeptidase [Grimontia hollisae CIP 101886]
 gi|262221297|gb|EEY72611.1| D-alanyl-D-alanine carboxypeptidase [Grimontia hollisae CIP 101886]
          Length = 347

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 13/312 (4%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP--- 90
           +D N+G ++AEN      NPASLTK+MT+YV+   ++     L   + ISKNA       
Sbjct: 1   MDYNSGKILAENNAYERLNPASLTKMMTSYVIGQEIERGNISLDDDVVISKNAWAKNFPG 60

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S    + G+T+ +++  + +I++S ND  VA+AE +  +E  FV  MN  +K LG++ T
Sbjct: 61  SSKMFIEVGTTVKVEDLNRGIIIQSGNDACVAMAEHIAGSEDSFVDLMNGWAKTLGMNNT 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGT 209
            F N+HG+   G Y+T  DMA+L   +  D P+    +  K     G    N N      
Sbjct: 121 KFSNSHGLDDDGLYSTPYDMALLGQALIRDVPEEYRIYNEKSFTYNGITQYNRNGLLWDK 180

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
            +  DG+KTG T  +G+++V+SA +GD  LIAV++G    N R   S  LL+ GF     
Sbjct: 181 SMNVDGIKTGHTEKAGYSLVSSATEGDMRLIAVVMGTESANARKAESKKLLNYGFRFFET 240

Query: 270 RKKINYII----KDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDF 323
                       +  +  +       ++++  V   + +  N        K  E+     
Sbjct: 241 VAPHKAGETFVTEKVWMGDTDQVALGVAKDTYVTLPRGKAKNLEASFVLEKTLEAPIA-- 298

Query: 324 EKITLLKNKITK 335
            K  ++     +
Sbjct: 299 -KGDVVGKLYYQ 309


>gi|259417976|ref|ZP_05741895.1| serine-type D-Ala-D-Ala carboxypeptidase [Silicibacter sp.
           TrichCH4B]
 gi|259346882|gb|EEW58696.1| serine-type D-Ala-D-Ala carboxypeptidase [Silicibacter sp.
           TrichCH4B]
          Length = 559

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 158/317 (49%), Gaps = 6/317 (1%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + +   +   +            ++D  TG V+     D   +PASLTK+MT Y+ F  +
Sbjct: 46  LTLAVGLVAVVPEQAAAAPYAAMVMDARTGEVLHSRNADTRLHPASLTKMMTLYIAFEAV 105

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           +  +  L T IT+S+NA   PPS    ++G  + L   ++   VKSAND A AI E++  
Sbjct: 106 RNGEISLDTEITVSRNAEAEPPSELGLRRGQKIALRYLIRAAAVKSANDAATAIGEAISG 165

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E  F + MN T+K LG++ T F NAHG+  +GH +TARDM IL   +  D+P+Y + F 
Sbjct: 166 SEAAFARRMNRTAKALGMTRTTFKNAHGLTANGHMSTARDMTILGRHMLYDYPEYYNLFS 225

Query: 190 IKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            K      K   NTN      + GADG+KTG+T A+GFN+V+SA +GD+ +IA + G   
Sbjct: 226 RKSTNAGTKVVYNTNRRFLAAYRGADGIKTGYTRAAGFNLVSSAKRGDERIIATVFGGQS 285

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              RN   A LL +GF       K+       Y  N    V    ++      + I  + 
Sbjct: 286 TAARNAKVAELLDLGFRRAPAYAKLQKPPMPPYVGNSG--VRLAEDDTHGLAGKTIRVSG 343

Query: 309 QMKE---AKDKESHFID 322
            + E    + + +  +D
Sbjct: 344 VISETMRPRARPAPEVD 360


>gi|163732221|ref|ZP_02139667.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter litoralis Och 149]
 gi|161394519|gb|EDQ18842.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter litoralis Och 149]
          Length = 389

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 150/341 (43%), Gaps = 12/341 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
             I+  A +       + A   +     ++D  TG V+     D P  PAS++KLMT Y+
Sbjct: 2   FRIVLAAFVLVASTLSAAAFETRAGAAFVMDQTTGTVLLNKNADAPLPPASMSKLMTLYM 61

Query: 65  VFSFLKEKK----AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
            F  ++  K      L   + +S++A  Y  S+   + G T+++++ L+ +IV S ND  
Sbjct: 62  AFEAVRRGKADGGLDLNELLPVSEHAQSYGGSSMFLRSGETVSVEDLLRGIIVVSGNDAC 121

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           V IAE+L     E  F + M   ++ LG++ + F+NA G  Q GH  + RD+AIL+ R+ 
Sbjct: 122 VVIAEALSPDGTEYGFARMMTQRAQQLGMNNSTFINASGWPQTGHVMSMRDLAILADRLI 181

Query: 179 TDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           TDFP++   F         +      N N  +   +GADG+KTG T  +G+ +V SA QG
Sbjct: 182 TDFPEFYPMFAETEFPFDNRVPSNSRNRNPVLTMGIGADGLKTGHTQEAGYGLVGSAKQG 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           D+ +I VI G      R + S ++++  F     R          K       S +V  +
Sbjct: 242 DRRVIFVITGLETTAARAQESQAIVNWAFRQFAMRDIGKAGQEFAKADVWMGSSPQVGLV 301

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           + E        +       E            K   L   +
Sbjct: 302 AAEDMNVLMPALADREIEAEVVFTGPIEAPIAKGDPLGELV 342


>gi|225018728|ref|ZP_03707920.1| hypothetical protein CLOSTMETH_02678 [Clostridium methylpentosum
           DSM 5476]
 gi|224948456|gb|EEG29665.1| hypothetical protein CLOSTMETH_02678 [Clostridium methylpentosum
           DSM 5476]
          Length = 395

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 22/356 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----------------IAETNKLPYYTLLDTNTGHVIA 43
           M + L  +A+++       L                  I+       Y L++ +TG V++
Sbjct: 1   MIRKLTALAVSLALLCSSALPVFADGLPEEVDETVAADISAGIPAKSYILMEASTGKVLS 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           E+  D    PAS+TK+M   ++   +      L   +T S++A+    +    + G  M+
Sbjct: 61  ESNADEQMAPASITKIMVMLLLMERIDAGTVTLDDMVTTSEHANSMGGTQIWLEVGEQMS 120

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +++ LK   V SAND AVA+AE +  +E+ F + MN  +K LG+  T F NA G+   GH
Sbjct: 121 VNDLLKATAVNSANDAAVALAEYMAGSEEAFAELMNQRAKELGMVNTTFKNATGLDADGH 180

Query: 164 YTTARDMAILSWRIKTDFP-QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
            +TARD+A+++  +             +  L        NTN  V  + G +GMKTG T 
Sbjct: 181 LSTARDIALMTQELLKHPKITEYTSIYMDSLRDGTTGLVNTNKMVRFYEGCNGMKTGTTD 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G  +  +A +   +LI+V +G+     R + + +LL  GF + +              
Sbjct: 241 DAGSCLSCTATRDGMTLISVSMGSTTSKERFQSARTLLDHGFASYSLYTPELDPSLIPPI 300

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNT----QMKEAKDKESHFIDFEKITLLKNKIT 334
           +    +  ++  ++ +    I+          +E    E      E   ++     
Sbjct: 301 KVNGGQQGSVGVKIDSASSNIVIPKGGESQVQQEISLAEELDAPVEPDQVVGKVTY 356


>gi|157146752|ref|YP_001454071.1| D-alanyl-D-alanine carboxypeptidase fraction A [Citrobacter koseri
           ATCC BAA-895]
 gi|157083957|gb|ABV13635.1| hypothetical protein CKO_02526 [Citrobacter koseri ATCC BAA-895]
          Length = 403

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 84/347 (24%), Positives = 143/347 (41%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +  A +++           +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCAAFITSAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADTRRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +TI  +A                K G  + +   ++ 
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 135 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 194

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 195 ALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLV 254

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
           ASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  + 
Sbjct: 255 ASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKVGKEFASEPAWFGDT 314

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + ++V  T       + +     +        +K  ++   
Sbjct: 315 DRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 361


>gi|239817881|ref|YP_002946791.1| beta-lactamase [Variovorax paradoxus S110]
 gi|239804458|gb|ACS21525.1| Beta-lactamase [Variovorax paradoxus S110]
          Length = 389

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 15/341 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++       +          Y LLD     ++A+   D P  PASLTKLM+AY+VF  L+
Sbjct: 18  SVGMIAAAQVPAPPEIAARSYLLLDVTANQILAQKDIDSPVEPASLTKLMSAYIVFDALR 77

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
            KK  LT  + +S+ A + P S         + +++ +K LIV+S ND  VA+AE +  T
Sbjct: 78  AKKITLTQTMPVSQRAWKMPGSRMFIDPKMQVPVEDLIKGLIVQSGNDATVALAEGVGGT 137

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
            + FV+ MN  +K LG+  T + N  G+   GH TTARD++IL+ R+  DFP+   Y+ I
Sbjct: 138 VEHFVELMNAQAKALGMKNTSYKNPEGLTAPGHTTTARDLSILATRLVRDFPEEAKYYAI 197

Query: 191 KGLEI---KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG------DQSLIA 241
           K             N N  +      DG+KTG T A+G+ ++A+A +        + L++
Sbjct: 198 KKYRYPGTPSTNDTNRNLLLFRDPTVDGLKTGHTEAAGYCMIATAKRDFPNLTGGRRLLS 257

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEE--- 295
           ++LG      R   S  LL+ G+      +  +           +  +N +     E   
Sbjct: 258 IVLGTSGETVRANESQKLLNWGYTAYDAVRLFDAGQPAATPAVWKGKANTLKLGRPEAIV 317

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           V           TQ+       + F  ++ +  LK  +  +
Sbjct: 318 VAVPAGTASKIKTQVARPDPLVAPFTKYQPVGSLKVTLDDQ 358


>gi|85715534|ref|ZP_01046515.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           sp. Nb-311A]
 gi|85697729|gb|EAQ35605.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           sp. Nb-311A]
          Length = 413

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 135/317 (42%), Gaps = 11/317 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++  +G V+ E   D    P+S+ KLMTA VVF+ +++ +  LT    IS+
Sbjct: 50  ETSAPTAILVEAKSGSVLFEKNADELRAPSSMMKLMTAEVVFNAIRKGEIKLTDEYVISE 109

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           N           S       S +++ + L   I++S ND  +A+AE +   E  F + M 
Sbjct: 110 NTWRKGGAPSGGSTMFAAINSRVSVQDLLHGAIIQSGNDSCMALAEGIAGNESAFAEKMT 169

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LGL+ + F N++G+    +  T R++A+L+  I   +P +   F  +       +
Sbjct: 170 ARARELGLTRSTFANSNGLPHPDNKMTVRELAVLARHIILTYPDFYKLFGEREFTWNKIR 229

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +    GADG+KTG+T   G+ +V S +Q    LI V+ G    + R   +  L
Sbjct: 230 QLNRNALLTAMDGADGLKTGYTKEGGYGMVGSVVQNGTRLIVVVNGLESADDRATAAKKL 289

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNTQMKEA 313
           L  GF N   R          Y +    +  ++        +V   +        ++   
Sbjct: 290 LEWGFRNFEIRTLFAAEQPVGYAKVFGGDSGSVQIAASDPVQVMVQKNGNDKLLARIVYT 349

Query: 314 KDKESHFIDFEKITLLK 330
               +     + I ++K
Sbjct: 350 GPVRAPVAPEQPIGVIK 366


>gi|254418835|ref|ZP_05032559.1| beta-lactamase, putative [Brevundimonas sp. BAL3]
 gi|196185012|gb|EDX79988.1| beta-lactamase, putative [Brevundimonas sp. BAL3]
          Length = 493

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 97/261 (37%), Positives = 150/261 (57%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ +++ + +N+ P  + ++ N      ++D  +G V+   + D    PASLTK+MT Y+
Sbjct: 12  VLALSLVLGANVRPIEAQSQENSRYAAIVIDAASGEVLFSRHADSRRYPASLTKMMTLYL 71

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  L + K      +T+S+ A+  PPS      G T+TLD+A++   V+SAND+AVAIA
Sbjct: 72  TFEALSQGKVHADDVLTVSQQAAAQPPSKLGLGAGQTITLDDAMRATAVRSANDMAVAIA 131

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E +F   M   ++ LG++ T +  A+G+      T+ARD AIL+  I  DFPQY
Sbjct: 132 EHIGGSESRFATLMTAKAQQLGMTQTRYFTANGLPDARQTTSARDQAILARAIMRDFPQY 191

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF +      G+ Y NTN  + T  G DGMKTG+T ASG+N+ ASA++  + LI V+L
Sbjct: 192 YKYFGLHDWAYNGRSYRNTNGLLPTGNGYDGMKTGYTNASGYNLAASAVRDGRRLITVVL 251

Query: 245 GALDRNTRNKVSASLLSMGFY 265
           G     +RN   A L+  GF 
Sbjct: 252 GGRSSASRNAHVAELMDTGFE 272


>gi|126739529|ref|ZP_01755221.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter sp.
           SK209-2-6]
 gi|126719175|gb|EBA15885.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter sp.
           SK209-2-6]
          Length = 493

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 104/260 (40%), Positives = 145/260 (55%), Gaps = 1/260 (0%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +LD  TG V+     D   +PASLTK+MT Y+ F  ++  +  L T + ISKN
Sbjct: 2   AAPYAAMVLDARTGEVLHSRNADTRLHPASLTKMMTLYIAFEAIRNGEISLDTKVRISKN 61

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+  PPS    + G  + L   ++   VKSAND A AI E+L  +E  F + M  T+K L
Sbjct: 62  AAAEPPSKLGLRSGQRIALRYLIRAAAVKSANDAATAIGEALSGSEAAFARRMTRTAKAL 121

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G+S T F NAHG+ + GH +TARDM  L   I  D+P+Y + F  K  +   K  PNTN 
Sbjct: 122 GMSRTSFKNAHGLTESGHMSTARDMTTLGRHILYDYPEYYNLFSRKTADAGVKTVPNTNR 181

Query: 206 A-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +  + GADG+KTG+T A+GFN+VASA +G++ +IA + G     +RN   A LL +GF
Sbjct: 182 RLLAAYKGADGIKTGYTRAAGFNLVASAKRGNERIIATVFGGKSSTSRNAKVAELLDLGF 241

Query: 265 YNKTDRKKINYIIKDFYQQN 284
                R K+    +  YQ N
Sbjct: 242 RRAPSRAKLRKPGRPAYQGN 261


>gi|322383131|ref|ZP_08056958.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152793|gb|EFX45419.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 414

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 87/362 (24%), Positives = 151/362 (41%), Gaps = 38/362 (10%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + + S      +     +     L++ NTG V+ EN  D    PAS++K+MT Y++   +
Sbjct: 9   LFVSSAAAADANEIPDLQAKSAILMEANTGQVLYENNADTLLPPASMSKMMTEYLIMEAI 68

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K+ K      + +SK A+    S     +G  +++ +    + + S+ND +VA+AE L  
Sbjct: 69  KDGKIKWEDKVPVSKQAASAIGSGQLLAEGEQLSVKDMFYAISIYSSNDASVAMAEYLGG 128

Query: 130 TEKKFVQHMNNTSKNLGLSA-THFMNAHGVV------------QHGHYTTARDMAILSWR 176
           TE++F   MN  +K LGLS   HF+NA G+             +     TARD AIL+  
Sbjct: 129 TEEEFANMMNKKAKELGLSEGAHFINATGLTRADLGQYAPKNIEGETMMTARDAAILARH 188

Query: 177 IKTDFPQYMHY-----------FQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTC 222
           I  D PQ + +            +   +           N N+    + G DG+KTG T 
Sbjct: 189 IVLDHPQVLEFTKTTSKKLRETDKTPMINFNWMLEGNKGNINFKPYAYDGLDGLKTGHTN 248

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G+    +A +GD  LI+V++G      R + +  +L  GF N   RK ++       +
Sbjct: 249 EAGYCFTGTAQRGDMRLISVVMGTNSEPKRFQETRKVLDYGFNNFEMRKVLDAN-APVEE 307

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES----------HFIDFEKITLLKNK 332
           Q        + +E+    KE +++  +      K +               +K   +   
Sbjct: 308 QKTVKISKGVKKEIEAGVKEPVSFVVKKGSGDVKVTGKVDPVSDKDLVAPIKKGDKVGTA 367

Query: 333 IT 334
             
Sbjct: 368 TL 369


>gi|188591036|ref|YP_001795636.1| d-alanyl-d-alanine carboxypeptidase; penicillin-binding protein 6a
           [Cupriavidus taiwanensis LMG 19424]
 gi|170937930|emb|CAP62914.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Cupriavidus taiwanensis LMG 19424]
          Length = 399

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 15/322 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + L D  +G  +A    D    PASLTKLMTAY+ F  LKEK+  L   +  +
Sbjct: 39  PQVAAKSWMLYDVTSGQALASQNADARIEPASLTKLMTAYLAFEALKEKRLTLDQAVVPT 98

Query: 84  KNASEYPPS--NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
               +          +    +T+ + L  LIV+S ND A+A+AE++  +E+ FV  MN  
Sbjct: 99  NLVLKVKSDESRMFIEPNKPVTVQDLLLGLIVQSGNDAALALAEAVGGSEEGFVAMMNRE 158

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ +G+  THF N  G+    HYTTA D+A L+ R+  DFP+Y   +  K       + P
Sbjct: 159 AQRMGMKNTHFTNTDGIPDPNHYTTAVDLATLTTRLIKDFPEYYSMYSQKEFTYNKIRQP 218

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNK 254
           N N  +      DG+KTG T ++G+ +++SA +       G + LI++++G      R +
Sbjct: 219 NRNRLLYIDSTVDGVKTGHTKSAGYCLISSAKRPLANVPDGSRRLISIVIGTTTEQVRTQ 278

Query: 255 VSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNT 308
            S  +L+ GF      +  +        D Y+         +  E  V   +        
Sbjct: 279 ESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKSGTVKIGVQNETFVTVPKGTGGRLKP 338

Query: 309 QMKEAKDKESHFIDFEKITLLK 330
            ++  +   +     +++ ++K
Sbjct: 339 VLERQELLIAPISAGQQVGMVK 360


>gi|260597057|ref|YP_003209628.1| D-alanyl-D-alanine carboxypeptidase fraction A [Cronobacter
           turicensis z3032]
 gi|260216234|emb|CBA29137.1| D-alanyl-D-alanine carboxypeptidase dacA [Cronobacter turicensis
           z3032]
          Length = 370

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 11/324 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K   +  
Sbjct: 5   IPGVPQIDAEAYILIDYNSGKVLAEQNADARRDPASLTKMMTSYVIGQAMKAGKFKESDV 64

Query: 80  ITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           +TI  +A                K G  + +   ++ + ++S ND  VA+A+ +  ++  
Sbjct: 65  VTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADYVAGSQDA 124

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN+    LGL  THF   HG+   G Y++ARDMA++   +  D P     ++ K  
Sbjct: 125 FVGLMNSYVTALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYREKEF 184

Query: 194 EIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
              G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G      R
Sbjct: 185 TFNGIRQTNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGR 244

Query: 253 NKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              S  LL+ GF        +        +  +  +       + +++  T       + 
Sbjct: 245 EAESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGDNDRASLGVDKDIYLTIPRGRMKDL 304

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
           +     +         K  ++   
Sbjct: 305 KASYVLNTSELHAPLAKNQVVGTI 328


>gi|292487778|ref|YP_003530653.1| D-alanyl-D-alanine carboxypeptidase [Erwinia amylovora CFBP1430]
 gi|292899010|ref|YP_003538379.1| penicillin-binding protein 6 [Erwinia amylovora ATCC 49946]
 gi|291198858|emb|CBJ45968.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase)
           [Erwinia amylovora ATCC 49946]
 gi|291553200|emb|CBA20245.1| D-alanyl-D-alanine carboxypeptidase [Erwinia amylovora CFBP1430]
          Length = 402

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 143/325 (44%), Gaps = 11/325 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +  A       + L+D N+  V+AE   D   +PASLTK+M++YV+   LK  K     
Sbjct: 32  QMPAAPQLDAKAWILMDYNSSKVLAEYNADLRLDPASLTKMMSSYVIGQALKAGKISKDD 91

Query: 79  PITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +T+ K+A                K G  + +    K ++++S ND ++A+A+ +  ++ 
Sbjct: 92  VVTVGKDAWATGNPVLKGSSLMFLKPGDRIAVSELNKGIVIQSGNDASIALADYVAGSQD 151

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  MN+  + LGL  THF   HG+  +G Y+TARDMA++   +  D P      + K 
Sbjct: 152 AFVGLMNHYVQALGLKNTHFKTVHGLDANGQYSTARDMALIGQALIRDVPDEYALHKDKA 211

Query: 193 LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 +  N N     T L  DG+KTG T  +G N+VASA+ GD+ +I+V+LGA     
Sbjct: 212 FTFNKIRQHNRNRLLWSTNLQVDGIKTGHTSGAGNNLVASAVDGDRRIISVVLGAATDAV 271

Query: 252 RNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + S  LL  G  N      +        +  +  +       ++++   T       N
Sbjct: 272 RFRESEKLLIWGVRNFETVTPVKAGNAFVTQRVWYGDRHEVNLGVAQDAAITLPHGQMKN 331

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +      +        K  ++   
Sbjct: 332 LKASFTLSQPQLTAPLAKNQVVGTI 356


>gi|237730616|ref|ZP_04561097.1| D-alanyl-D-alanine carboxypeptidase fraction A [Citrobacter sp.
           30_2]
 gi|226906155|gb|EEH92073.1| D-alanyl-D-alanine carboxypeptidase fraction A [Citrobacter sp.
           30_2]
          Length = 403

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADTRRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +T+  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMAMIGQALIRDVPNEYSI 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  N       + ++V  T   
Sbjct: 272 RTYKGRETESKKLLTWGFRFFETVNPLKVGKEFASEPAWFGNTDRASLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYVLNTTELHAPLQKNQVVGTI 361


>gi|160931733|ref|ZP_02079127.1| hypothetical protein CLOLEP_00565 [Clostridium leptum DSM 753]
 gi|156869378|gb|EDO62750.1| hypothetical protein CLOLEP_00565 [Clostridium leptum DSM 753]
          Length = 382

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 145/323 (44%), Gaps = 4/323 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +       E    P   L++ +TG V+ E         AS+TK+MT  +V   + + +  
Sbjct: 23  VTAGALSEEDLTAPSAVLMEASTGKVLFEKNSHEVRACASITKVMTLLLVMEAIDQGRMS 82

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           LT  IT S++AS    S+   + G TM+ D+ +K  +V SAND AVA+AE L  TE+ FV
Sbjct: 83  LTDTITASEHASSMGGSDIWLEPGETMSADDMVKATVVASANDAAVALAEHLEGTEEAFV 142

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-TDFPQYMHYFQIKGLE 194
           Q MN  +  LG+  T F N +G+ + GH T+A D+A++S  +   +         +  L 
Sbjct: 143 QKMNQRAAELGMKDTVFKNCNGLDEEGHVTSAYDVALMSRELIKHEKIFDYTTIWMDTLR 202

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  NTN  + ++ G  G+KTG T  +G  I A+A +   SLI V+LG+     R  
Sbjct: 203 EGKTQIVNTNKLLKSYNGITGLKTGTTGGAGSCITATAQRDGLSLIGVVLGSATGKERFT 262

Query: 255 VSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            +A+LL  GF N    T       +        + ++V   S    +             
Sbjct: 263 DAAALLDYGFSNYMIYTPGLPEEALQPVPVVNGMQSQVAVESAASGSVLLTKGREKDLKT 322

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
           E K  ES      K   L   + 
Sbjct: 323 EVKLSESVEAPVAKGQQLGKIVY 345


>gi|83590342|ref|YP_430351.1| Serine-type D-Ala-D-Ala carboxypeptidase [Moorella thermoacetica
           ATCC 39073]
 gi|83573256|gb|ABC19808.1| Serine-type D-Ala-D-Ala carboxypeptidase [Moorella thermoacetica
           ATCC 39073]
          Length = 412

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 9/318 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D  TG ++ E      + PAS+TKLMT  V    +   +A L  P+ +S+
Sbjct: 57  DINAKGAILMDPQTGEILWEKNSHAHYYPASMTKLMTMVVAMDMVANGQATLDEPVQVSE 116

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A  +  S      G T  L+  L  + V SAND AVA+AE L  +E+ FV  MN  +K 
Sbjct: 117 RAESFGGSEVFLAVGETFPLEQMLIAIAVASANDAAVAVAEHLAGSEEAFVAMMNAKAKE 176

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--- 201
           LGL  THF N HG+    +YT+A DMA+++      +P+   +  IK   ++        
Sbjct: 177 LGLKDTHFANCHGLHDEQNYTSAYDMAVIARYAL-KYPKIREWTSIKRYTLRKDPLTILD 235

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            TN  +  + G DG KTGFT A+G N+V++  +    L+AV++G          S  L +
Sbjct: 236 TTNKMLYWYPGTDGFKTGFTDAAGLNLVSTVERDGLRLVAVVMGVETPQGHFTESMKLYN 295

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII-----NYNTQMKEAKDK 316
             F     ++                +V  +           I            + +  
Sbjct: 296 WAFKQWAFKEFYGPGQVVASIPVGKGQVEQVKIVTTGKVGARISRLRGKAEGVTTKVELP 355

Query: 317 ESHFIDFEKITLLKNKIT 334
                  ++  ++   + 
Sbjct: 356 GIVNAPVKEGQVVGQALV 373


>gi|296133697|ref|YP_003640944.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermincola sp. JR]
 gi|296032275|gb|ADG83043.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermincola potens JR]
          Length = 413

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 18/343 (5%)

Query: 3   QFLVIIAMAMLS---NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
             LV+  +  +     I P  +           L+D  +G V+    PD    PAS TK+
Sbjct: 10  ILLVVFFVITVVGGPVIAPVYAQEPGIVGKAGVLIDARSGQVLYAKNPDLRLPPASTTKI 69

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +T  +           +   +T+SKNA     S+     G T+TL++ L  +++ S ND 
Sbjct: 70  LTVAIALEE-----GNVNDKVTVSKNAVTQEGSSIYLTAGETLTLEDLLYGVLLSSGNDA 124

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVA+AE +  +   FV+ MN  +K  G + ++F N +G+    HYTTARD+A+++     
Sbjct: 125 AVAVAEHIAGSVPAFVKLMNKKAKEWGATNSNFCNPNGLPNDEHYTTARDLAMIAKH-AM 183

Query: 180 DFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           + P +      K  EI         +  N N  +  + GA+G+KTG+T  +   +V+SA 
Sbjct: 184 ELPLFREMAATKVKEIKRADPANFFRLINHNKLLWRYEGANGIKTGYTRVAQQCLVSSAK 243

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII--KDFYQQNLSNEVPN 291
           +GDQ  IAV+LG++  N     S +LL  GF N    K +      ++   ++ + +V  
Sbjct: 244 RGDQEFIAVVLGSVGNNI-WTDSMALLDYGFKNFRTTKLVEKGKFIQEISVKDGTGKVRV 302

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           ++E       ++ + +    +    +      +K   +     
Sbjct: 303 VTEREQYFTGKLADNDVPKAKTIIFKGLAAPIKKGQKVGYITY 345


>gi|156933395|ref|YP_001437311.1| D-alanyl-D-alanine carboxypeptidase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531649|gb|ABU76475.1| hypothetical protein ESA_01208 [Cronobacter sakazakii ATCC BAA-894]
          Length = 390

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 94/346 (27%), Positives = 144/346 (41%), Gaps = 18/346 (5%)

Query: 5   LVIIAMAMLSNIFPFL-------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           ++ ++  ML+ I                     Y L+D  TG ++A N      NPASLT
Sbjct: 8   MIAVSCIMLAGITAQANAAALSMPQPPAIMAGSYVLMDYTTGQILAANNEHQQRNPASLT 67

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   +   +      +T+ K+A                K G  +T+ +  + L
Sbjct: 68  KLMTGYVVDRAIDSHRITPDDVVTVGKDAWAKDNPVFEGSSLMFLKAGDRVTVRDLSRGL 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV S ND  VA+A+ +   + +FV  MN+  + LGL  THF   HG+   G +++A D+A
Sbjct: 128 IVDSGNDACVALADYVAGGQPQFVAMMNDYVQKLGLKDTHFETVHGLDAPGQHSSAYDLA 187

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  I    P + H +  K L   G    N N       L  DG+KTG T  +GFN++A
Sbjct: 188 VLSRAIIHGEPAFYHMYSEKSLTWNGITQQNRNGLLWDKTLNVDGLKTGHTSGAGFNLIA 247

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLS 286
           S++ G + LIAVI+GA     R   +  LL  G       + +    K      +     
Sbjct: 248 SSVDGKRRLIAVIMGADSPKGREDQARKLLHWGQQTFDTVEILQKGKKVGTERVWYGKDE 307

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                   +   T  +    N + K   D+E      +    +   
Sbjct: 308 QVAVGTDRDFWLTLPKAQLANVKAKYLLDRERLDAPLDANERVGEI 353


>gi|222475494|ref|YP_002563911.1| Serine-type D-Ala-D-Ala carboxypeptidase (dacA) [Anaplasma
           marginale str. Florida]
 gi|222419632|gb|ACM49655.1| Serine-type D-Ala-D-Ala carboxypeptidase (dacA) [Anaplasma
           marginale str. Florida]
          Length = 380

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 8/340 (2%)

Query: 1   MRQFLV-----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +R+FL+           L+   P  ++    K P+  + +  +  V+ E+  D    P+S
Sbjct: 2   IRRFLLSFLVPAFCCLALAPARPSYALKMHTKAPHAIVYELGSRTVLFEHDADVAVAPSS 61

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KLMT Y+VF  L      +    ++S++A +   S++  K G  + + + +    V S
Sbjct: 62  MSKLMTLYLVFQHLHAGLIKMDDTFSVSESAWKRGGSSAFLKVGQMVKVRDLIMGAAVSS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  +A+AE +  ++++FV+ +N+ +K + L+ + F N  G    GH  + RD+  LS 
Sbjct: 122 GNDACIALAEGVSGSQEQFVEDINSLAKEMNLAHSSFTNVTGWPDEGHLMSVRDILTLSV 181

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           RI  DFP+Y H F  K     G    N N  +   +G DG+KTG T  +G+ I ASA + 
Sbjct: 182 RIFEDFPEYYHVFGEKQFTYNGVTQKNYNTLLNYNIGVDGIKTGHTEKAGYGIAASAQKD 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           ++ +  V+ G      R   +  LL   F     +          +          V   
Sbjct: 242 NRRVFVVVNGLKTETERAYETKRLLLYAFNRFETKVVFPAGSVVGEVKVWNGRKGTVQMH 301

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +            +       K +     +K   +   
Sbjct: 302 VRDDVVISYPRDLSKSVKAFISHKSTIAAPVKKGQEIGTL 341


>gi|149190858|ref|ZP_01869122.1| D-alanyl-D-alanine carboxypeptidase [Vibrio shilonii AK1]
 gi|148835318|gb|EDL52291.1| D-alanyl-D-alanine carboxypeptidase [Vibrio shilonii AK1]
          Length = 394

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 98/322 (30%), Positives = 148/322 (45%), Gaps = 9/322 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                T     Y L+D  +G ++     D    PASLTKLMTAYVV   ++  +    + 
Sbjct: 25  TPNPPTLNAKGYVLMDYQSGAILVGGNQDAALAPASLTKLMTAYVVGKEIENGRTSWDSK 84

Query: 80  ITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           + +S+NA        S    K G  +T+ + L+ LIV+S ND AVA+AE +  TE  FV 
Sbjct: 85  VAVSENAWSVKFPDSSKMFIKPGDNVTVADLLRGLIVQSGNDAAVALAEHVAGTESGFVA 144

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  + NLG++ T F+NAHG+   G +TT  DMAIL  +I  D P+    +  K     
Sbjct: 145 LMNQWAVNLGMNNTQFINAHGLDGQGIHTTPNDMAILMRKIIEDVPEVYEIYSEKRFVWA 204

Query: 197 GKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  N N  +       DG KTG+T  +G+++V+SA QG   LI+V++G     TR + 
Sbjct: 205 DIKQYNRNRLLWDNSLNVDGGKTGYTSDAGYSLVSSATQGQMRLISVVMGTPSTQTRVEA 264

Query: 256 SASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           S  LL+ GF      +       +     ++   +N       +V  T     N     K
Sbjct: 265 SRQLLNYGFRFYETDQLAVADESEATIRVWKGKNANIDVGFDHDVYATYLRG-NSRGVTK 323

Query: 312 EAKDKESHFIDFEKITLLKNKI 333
           E +         ++  ++ N  
Sbjct: 324 ETEIYAPLVAPVKQGDIIGNVT 345


>gi|254465451|ref|ZP_05078862.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacterales bacterium Y4I]
 gi|206686359|gb|EDZ46841.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacterales bacterium Y4I]
          Length = 389

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 8/324 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A         ++D  T  V+     D P  PAS++KLMT YV F  L++ +  L   
Sbjct: 21  PAAAFDTSARAAYVVDAGTDTVLLSKNSDVPLPPASMSKLMTLYVAFEALRDGRLTLDER 80

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFVQH 137
           + +S++A  Y  S         + +++ L+ +IV S ND  V IAE+L     E  F ++
Sbjct: 81  LPVSEHAMSYGGSTMFLDTTDRVRVEDLLRGIIVLSGNDACVVIAEALSPDGTEAGFARY 140

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK- 196
           M   ++++G++A+ F N++G    GH  +  D+A+L+ R+  DFP+Y   F     E   
Sbjct: 141 MTKRAEDMGMTASTFANSNGWPAAGHRMSVHDLAVLAERLIEDFPEYYPLFAETTFEFDG 200

Query: 197 --GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
                  N N  +   +GADG+KTG T  +G+ +V SA QGD+ +I V+ G      R +
Sbjct: 201 RAPSNIRNRNPLLRLGIGADGLKTGHTEEAGYGLVGSATQGDRRVIFVVSGLDTERGRAE 260

Query: 255 VSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            + ++++  F   T +      I   +    +     V  +  +        ++ NT   
Sbjct: 261 EAEAIVNWSFRQFTKKTVAKEGIAIAEAEIWRGAERSVGLVPAKDLEILLPSLSANTIQG 320

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
           E           +K   L   + +
Sbjct: 321 EVVYNGPIEAPVKKGQRLAELVLQ 344


>gi|238785719|ref|ZP_04629693.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia bercovieri ATCC
           43970]
 gi|238713359|gb|EEQ05397.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia bercovieri ATCC
           43970]
          Length = 383

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 87/328 (26%), Positives = 139/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 12  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 71

Query: 74  AMLTTPITISKNAS------EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A           S    K G  + +    + + ++S ND  VA+A+ +
Sbjct: 72  IGPEDMVTVGKDAWATGNPEFQGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 131

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN    LGL  T F   HG+   G Y++ARDMA++   +  D P     
Sbjct: 132 AGSQDSFVNLMNNYVNALGLKNTQFKTVHGLDAEGQYSSARDMALIGQALIRDVPDEYAI 191

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T ++G+N+VASA  G   LI+ +LG 
Sbjct: 192 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTASAGYNLVASATDGQMRLISAVLGG 251

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 252 RTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDVYLTIPR 311

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 312 GRMKDLKASYVLNTPEIHAPLAKNQVVG 339


>gi|254460841|ref|ZP_05074257.1| D-alanyl-D-alanine carboxypeptidase family protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677430|gb|EDZ41917.1| D-alanyl-D-alanine carboxypeptidase family protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 454

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 8/310 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M+  +   +S A         ++D  +G V+     D   +PASLTK+MT YV F  ++ 
Sbjct: 1   MVVALPLSVSAAP----YAAFVMDARSGEVLHARNADTRLHPASLTKMMTLYVAFQAIEN 56

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L T + IS NA+   PS    + G  +     ++   VKSAND A AI E L  +E
Sbjct: 57  GEITLDTTVKISANAAAEQPSKLGLRSGQRIKFRYLIRAAAVKSANDAATAIGEILEGSE 116

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F + M  T+K+LG+S T F NAHG+ + GH +TARDM+ L   +  D+P Y + F  K
Sbjct: 117 AAFARRMTRTAKSLGMSKTTFKNAHGLTEKGHLSTARDMSTLGRHLLYDYPDYYNLFSRK 176

Query: 192 GLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
             +   K  PNTN   +  + GADG+KTG+T A+GFN+VASA +G + +IA + G     
Sbjct: 177 STDAGVKTVPNTNRRLLSNYRGADGIKTGYTRAAGFNLVASAERGQERIIATVFGGRSTA 236

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           TRN   A LL MGF     R  +    K  Y  + ++        V    K+ +    + 
Sbjct: 237 TRNARVAELLDMGFKRAPSRVALRKPTKPAYGGSRASAKT---IRVVGAVKKSLRPKARA 293

Query: 311 KEAKDKESHF 320
              +      
Sbjct: 294 LRPETAPVLV 303


>gi|171060904|ref|YP_001793253.1| Serine-type D-Ala-D-Ala carboxypeptidase [Leptothrix cholodnii
           SP-6]
 gi|170778349|gb|ACB36488.1| Serine-type D-Ala-D-Ala carboxypeptidase [Leptothrix cholodnii
           SP-6]
          Length = 389

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 91/325 (28%), Positives = 153/325 (47%), Gaps = 13/325 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +         Y LLD +   V+AE   D    PASLTKLMTAY+VF  L++KK  L  
Sbjct: 28  AQTAPPEVAARAYLLLDVSANQVLAERDADATVEPASLTKLMTAYLVFQALRDKKLALEQ 87

Query: 79  PITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
            +T+S+ A        S    + G+ + +++ +K +IV+S ND  V +AE++  T + FV
Sbjct: 88  ELTVSERAWRTGMTDTSRMYIQVGTKVKVEDLIKGMIVQSGNDATVQLAEAVGGTLENFV 147

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++  GL  T F N  G+   GH +TAR+++I++ R+  DFP    Y+ +K    
Sbjct: 148 VLMNRQAQAFGLKVTQFRNPEGLPAPGHVSTARELSIIASRLLVDFPAEARYYTLKEFTF 207

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG----DQSLIAVILGALDRNT 251
              K PN N  +      DG+KTG+T  +G+ ++A+A +      + L++VILGA  + +
Sbjct: 208 NKIKQPNRNLLLWRDPTVDGLKTGYTDNAGYCLIATAKRDLPAGQRRLVSVILGASSKES 267

Query: 252 RNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEV--PNISEEVCTTQKEIIN 305
           R   +  LL+ G+      K  +          ++   +       +   V   + E   
Sbjct: 268 RATEAQKLLNWGYSAWDAIKLYDARQTITTAPVWKGASATAKLGTLVPLVVTVPRGEGSQ 327

Query: 306 YNTQMKEAKDKESHFIDFEKITLLK 330
             T++       +     + +  LK
Sbjct: 328 LKTEITRTDPLLAPLTAGQPVGTLK 352


>gi|291618006|ref|YP_003520748.1| DacD [Pantoea ananatis LMG 20103]
 gi|291153036|gb|ADD77620.1| DacD [Pantoea ananatis LMG 20103]
          Length = 386

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 92/346 (26%), Positives = 147/346 (42%), Gaps = 15/346 (4%)

Query: 2   RQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           R+ L+ + +   S       PF           + L+D  TG V+    PD   NPASLT
Sbjct: 4   RRLLITVTVFWASLAQADDMPFPVTPPAIDAASWVLMDATTGQVLTAGNPDERRNPASLT 63

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   + +KK      +T+ K+A                K G  +++ +  + +
Sbjct: 64  KLMTGYVVDRAIDQKKITRDDMVTVGKDAWAAGNPVFKGSSLMFLKPGDKLSVRDLSRGV 123

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           I+ S ND  VA+A+ +  ++  FV+ MN+  + LGL+ THF   HG+   G +++A DMA
Sbjct: 124 IIDSGNDACVALADYVAGSQDNFVKLMNHYVEKLGLTNTHFETVHGLDAPGQFSSALDMA 183

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVA 230
            LS  I    P +   ++ K L   G    N N  +       DG+KTG T  +GFNI+A
Sbjct: 184 KLSRAIIDGEPDFYAMYREKTLTWNGITQNNRNGLLWDNSLHVDGLKTGHTETAGFNIIA 243

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           S + G   LIAV++G      R + +  LL  G       +  +   K      +  N  
Sbjct: 244 SNVVGQHRLIAVVMGGKSAKGREEQARKLLVWGQNTFDTVQLFHAGKKIGSEHVWYGNPH 303

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 + +V  +       N + K   ++       +    +   
Sbjct: 304 QVEVGTANDVYLSLPRSEIPNVKAKYVINRSDLEAPLKANENIGEI 349


>gi|254478669|ref|ZP_05092040.1| D-alanyl-D-alanine carboxypeptidase superfamily protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214035356|gb|EEB76059.1| D-alanyl-D-alanine carboxypeptidase superfamily protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 333

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 24/341 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M+++  ++ + M    F  +  S   +       ++D NTG V+ E         AS TK
Sbjct: 1   MKKYFSLLLILMFFVTFSKVYGSDIPSVSAKAAIVMDQNTGRVLYEKNAHLKLPMASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +        +  L   +T+S+ A+    S+     G  + +++ L  +++ S ND
Sbjct: 61  IMTLLIALE-----RGNLNDIVTVSQKAASVGGSSIWLSPGEKIDMESLLYGIMLNSGND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWR 176
            A AIAE +  T + FV+ MN  +K +G   THF+   G+      HYTTA D+A+++  
Sbjct: 116 AATAIAEHIGGTVENFVEMMNQKAKEIGAYNTHFVTPSGLDISIDDHYTTAYDLALITRY 175

Query: 177 IKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
              ++P++      K   I        +   N N  +  + GADG+KTGFT  +G  +V+
Sbjct: 176 AFLNYPKFAEIVSTKEKTIPWEGKEWDRYLRNKNKLLWIYEGADGVKTGFTNKAGRCLVS 235

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           SA +  +  IAV+L +       + S  +L   F      K           +    ++ 
Sbjct: 236 SATREGRRFIAVVLNSP---PMWEDSMKILDYAFSRFKPFKVFERNDVVKKVKVEKGKIE 292

Query: 291 NISEEVCTT------QKEIINYNTQMKEAKDKESHFIDFEK 325
            I   V         ++EI   N +       E+     EK
Sbjct: 293 EIEVAVEKDCIIPVSEEEIGKVNLEFHIPDKLEAPIKKGEK 333


>gi|260432451|ref|ZP_05786422.1| D-alanyl-D-alanine carboxypeptidase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416279|gb|EEX09538.1| D-alanyl-D-alanine carboxypeptidase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 475

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 99/294 (33%), Positives = 149/294 (50%), Gaps = 1/294 (0%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + +  +  I    +           ++D  TG V+     D   +PASLTK+MT Y+ F 
Sbjct: 13  LFLIAMIWIAAVAATQALAAPYAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIAFE 72

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            ++  +  L TP+TI+K A+  PPS    + G  +     ++   VKSAND A AI  +L
Sbjct: 73  AVRNGEITLDTPVTITKAAAAEPPSKLGLRAGQKIAFRYLIRAAAVKSANDAATAIGIAL 132

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  F + M  T+K +G+S T F NAHG+ + GH +TARDM  L   +  D+P+Y + 
Sbjct: 133 SGSEAAFARRMTRTAKAMGMSRTTFKNAHGLTEPGHLSTARDMTTLGRHLLYDYPEYYNL 192

Query: 188 FQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           F  +      K  PNTN   +  + GADG+KTG+T A+GFN+VASA +G++ +IA + G 
Sbjct: 193 FSRQSTYAGIKTVPNTNRRLLAAYKGADGIKTGYTRAAGFNLVASAKRGNERIIATVFGG 252

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
                RN   A LL +GF     R  I    +  Y  N       ++  +   Q
Sbjct: 253 KSSAWRNAKVAELLDLGFRRAPSRAPIRKPSRPAYAGNAGLGDTQVARAIGAPQ 306


>gi|300023249|ref|YP_003755860.1| serine-type D-Ala-D-Ala carboxypeptidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525070|gb|ADJ23539.1| Serine-type D-Ala-D-Ala carboxypeptidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 397

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 15/341 (4%)

Query: 7   IIAMAMLSNIFP------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +IA+++L+ + P          A T+K P   L+D  TG  + + + D P  PAS++KLM
Sbjct: 14  LIAISVLTAVGPEANPALAAEAAFTSKAPRAILIDAATGATLFQQHADEPAPPASMSKLM 73

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKS 115
           T  V+F  +KE +   T   T+S NA     +            + +T+D  ++ ++++S
Sbjct: 74  TLAVLFRAMKEGRIQKTDEFTMSVNAWRNGGAPSGTSAMMVPVNTKVTVDELIQGIVIQS 133

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND A+ +AE +  +   F + MN+ +K +GL+ + F NA G+       +ARD+A+L+ 
Sbjct: 134 GNDAAMCVAEGMAGSIPAFARMMNDEAKRIGLTKSTFTNASGLPDPQQVMSARDLAVLAR 193

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            I  ++P Y   F  K    +  ++ N N  +   +GADG+KTG T A+GF +V SA+Q 
Sbjct: 194 YIIDEYPDYYPVFAQKEFLYRKHRFINRNPLLFQNIGADGLKTGHTAAAGFGLVGSAVQD 253

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPN 291
            + LI V+ G    + R + +  LL+ GF +    +  +          +   +      
Sbjct: 254 GKRLIVVVSGLEKADQRKEEAVKLLNWGFNSFNTVRLYDANEVIGQARVWGGKVWYVPLA 313

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            + +V  T  +         E   K       +K   +   
Sbjct: 314 ANADVTFTVPKFPANQKISAEIVYKAPLKPPVKKGDQVATL 354


>gi|269958469|ref|YP_003328256.1| D-alanyl-D-alanine carboxypeptidase [Anaplasma centrale str.
           Israel]
 gi|269848298|gb|ACZ48942.1| D-alanyl-D-alanine carboxypeptidase [Anaplasma centrale str.
           Israel]
          Length = 380

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 8/343 (2%)

Query: 1   MRQFLV-----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +R+FL+           L+   P  ++    K P+  + +  +  V+ E+  D    P+S
Sbjct: 2   IRRFLLSFLVPAFCCLALAPARPSYALKMHTKAPHAIVYELGSRTVLFEHDADVAVAPSS 61

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KLMT Y+VF  L      +    ++S++A +   S++  K G  + + + +    V S
Sbjct: 62  MSKLMTLYLVFQHLHAGLIKMDDTFSVSESAWKRGGSSAFLKVGQMVKVRDLIMGAAVSS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  +A+AE +  ++++FV+ +N  +K + L+ + F N  G    GH  + RD+  LS 
Sbjct: 122 GNDACIALAEGVSGSQEQFVEDINGLAKEMNLAHSSFTNVTGWPDEGHLMSVRDILTLSV 181

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           RI  DFP+Y H F  K     G    N N  +   +G DG+KTG T  +G+ I ASA + 
Sbjct: 182 RIFEDFPEYYHVFGEKQFTYNGVTQKNYNTLLNYNIGVDGIKTGHTEKAGYGIAASAQKD 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           ++ +  V+ G      R   +  LL   F     +          +          V   
Sbjct: 242 NRRVFVVVNGLKTETERAYETKRLLLYAFNRFETKVVFPAGSVVGEVKVWNGRKGTVQMH 301

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +            +       K +     +K   +     +
Sbjct: 302 VRDDVVISYPRDLSKSVKAFVSYKSTVAAPVKKGQEIGTLSVQ 344


>gi|238755056|ref|ZP_04616404.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia ruckeri ATCC
           29473]
 gi|238706760|gb|EEP99129.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia ruckeri ATCC
           29473]
          Length = 403

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 91/354 (25%), Positives = 146/354 (41%), Gaps = 24/354 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA-------------ETNKLPYYTLLDTNTGHVIAENYPDH 49
           +F+  IA+  +  I                           Y L+D N+G V+AE   D 
Sbjct: 8   RFIKSIALGTVIVISATSVANADDVNMKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADA 67

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMT 103
             NPASLTK+MT+YV+   +K  K      +T+ K+A                K G  + 
Sbjct: 68  RRNPASLTKMMTSYVIGQAIKSGKIGPEDMVTVGKDAWATGNPVFQGSSLMFLKPGDQVP 127

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +    + + ++S ND  VA+A+ +  ++  FV  MNN    LGL  THF   HG+   G 
Sbjct: 128 VSKLTRGINLQSGNDACVAMADYVAGSQDSFVNLMNNYVNALGLKNTHFKTVHGLDAEGQ 187

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTC 222
           Y++ARDMA++   +  D P     ++ K       +  N N     T L  DG+KTG T 
Sbjct: 188 YSSARDMALIGQALIRDVPDEYAIYKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTD 247

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----K 278
           A+G+N+VASA +G   LI+ +LG      R   S  LL+ GF        +        +
Sbjct: 248 AAGYNLVASATEGQMRLISAVLGGHTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASE 307

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  +       + ++V  T       + +     +         K  ++ + 
Sbjct: 308 PVWFGDTDRVQLGVDQDVYLTIPRGRMKDLKASYVLNTPEIHAPLAKNQVVGSI 361


>gi|294676715|ref|YP_003577330.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacter capsulatus SB
           1003]
 gi|294475535|gb|ADE84923.1| D-alanyl-D-alanine carboxypeptidase-1 [Rhodobacter capsulatus SB
           1003]
          Length = 538

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 94/290 (32%), Positives = 143/290 (49%), Gaps = 6/290 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A+ +        +           ++D  TG V+ E   D   +PASLTK+MT Y+ F
Sbjct: 12  LLAIFLAVLPVALSAAPF-----AAYVMDARTGEVLYEKNADTRLHPASLTKMMTLYIAF 66

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             ++  +A L T +T+S NA+   PS    + G  + L   ++   +KSAND A AI + 
Sbjct: 67  QAIESGEASLDTMVTVSANAAGQAPSRLGLRTGQKIALRYLIRGAAIKSANDAAAAIGDF 126

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L   E  F   MN T+K LG+  T F NA+G+ + GH +TA DM+IL   +  DFPQY +
Sbjct: 127 LEGDEAHFAARMNRTAKALGMKNTTFKNANGLTKAGHLSTAHDMSILGRHLLYDFPQYYN 186

Query: 187 YFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            F  +  +       NTN      + GADG+KTG+T  +GFN+ ASA +G++ +IA I G
Sbjct: 187 LFSRRTADAGIAHVANTNRRFLDAYDGADGIKTGYTVPAGFNLTASAQRGNKRIIATIFG 246

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
                 RN   A L+ +GF     +             N  +++     E
Sbjct: 247 GTSPAARNSKMAELMDLGFERAPGKVNAQKPEPPMLMANAESDIAGPQVE 296


>gi|294671129|ref|ZP_06735984.1| hypothetical protein NEIELOOT_02837 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307237|gb|EFE48480.1| hypothetical protein NEIELOOT_02837 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 430

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 95/321 (29%), Positives = 146/321 (45%), Gaps = 5/321 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P  S A       Y + D  +G ++     D    PASLTKLMTAY+ F  L+E +  
Sbjct: 67  PVPQASTAPEIAAAAYLVQDLQSGQILTGKNLDKQIEPASLTKLMTAYLAFKALEEGRLK 126

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
             T +T S+ A     S      G  + + + LK LIV+S ND AV +AE+L  +E  F 
Sbjct: 127 AETMLTPSETAWRAEGSRMFLNAGKPVAVGDLLKGLIVQSGNDAAVTLAEALGGSEVGFA 186

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  +K LG+S THF+NA G+   GH +T RD+AILS  I  D+P+Y   + ++  + 
Sbjct: 187 DMMNAEAKRLGMSKTHFVNATGLPSDGHMSTVRDLAILSAAIIKDYPKYYPIYSMQSFKY 246

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              + PN N  +      DG+KTG T  +G+N++AS+ +  + +++V++G      R   
Sbjct: 247 NNIEQPNRNLLLYRDPNVDGLKTGHTNTAGYNLIASSKRNGRRVVSVVVGTESIEARAGE 306

Query: 256 SASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           S+ LL+         K  +          Y+    N      E V  T         +  
Sbjct: 307 SSKLLNWALQAFDTPKAYDANTPVSSVKVYKGQEDNVNIGFLEPVYLTIPHGEGNKVKPV 366

Query: 312 EAKDKESHFIDFEKITLLKNK 332
             +  +      EK  +L   
Sbjct: 367 L-ETVQPVLAPIEKGQVLGKL 386


>gi|283834062|ref|ZP_06353803.1| D-alanyl-D-alanine carboxypeptidase DacA [Citrobacter youngae ATCC
           29220]
 gi|291070205|gb|EFE08314.1| D-alanyl-D-alanine carboxypeptidase DacA [Citrobacter youngae ATCC
           29220]
          Length = 403

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADSRRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +T+  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMAMIGQALIRDVPNEYSI 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  N       + ++V  T   
Sbjct: 272 RTYKGRETESKKLLTWGFRFFETVNPLKVGKEFASEPAWFGNTDRASLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYVLNTTELHAPLQKNQVVGTI 361


>gi|190571728|ref|YP_001976086.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|190358000|emb|CAQ55464.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
          Length = 368

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 6/339 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   LV + +  +   + + S     K     +LD  +   I E+       P+S++KLM
Sbjct: 1   MLSKLVTLLLIFIFPFYSY-SYQFRTKAKQAIVLDLASDSFIFEHNSREKMAPSSMSKLM 59

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T YV F +LK     +     +S+ A E   S+   K+G  +T+   L+ + + S ND  
Sbjct: 60  TLYVAFDYLKAGIIKMEDKFRVSRKAWERKGSSMFLKEGQFVTVKELLEGITIASGNDAC 119

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE +  +E+ FV  MN  +++L L+ +HF+N+ G     H+ +A+D+  L+ RI TD
Sbjct: 120 IALAEGIAGSEENFVAEMNEVAQDLNLNDSHFVNSSGWPDENHFMSAKDLVTLAKRIFTD 179

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+Y   F  + L        N N  +   +G DG+KTG T A G+ I+ SA + D+ + 
Sbjct: 180 FPEYYDLFSEQYLTYNDIVQKNKNLLLFHDIGVDGLKTGHTSAGGYGIIVSAKRNDRRIF 239

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
           AV+ G      R + +  L+     +   +K           +            ++ +V
Sbjct: 240 AVVNGLDTEKERIEEAKRLIQYSLNHFNTKKIFAKDSVVEEINIVYGKDKKVPVTVANDV 299

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             T    ++   +++  + K+      +K   +     +
Sbjct: 300 TITYNRRLHDKIKVRI-EYKDMVPAPIKKGQEVGKIFVE 337


>gi|75675657|ref|YP_318078.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           winogradskyi Nb-255]
 gi|74420527|gb|ABA04726.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           winogradskyi Nb-255]
          Length = 413

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 11/317 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   LL+  +G V+ E   D    P+S+ KLMTA VVF+ + + +  LT    IS+
Sbjct: 50  ETSAPTAILLEAKSGSVLFEKNADELRAPSSMMKLMTAEVVFNAVTKGEIKLTDEYVISE 109

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           N           S       S + + + L+  I++S ND  +A+AE +   E  F + M 
Sbjct: 110 NTWRKGGAPSGGSTMFAAINSRIPVQDLLRGAIIQSGNDSCMALAEGIAGHESAFAEKMT 169

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG+S + F N+ G+    +  T R++A L+  I   +P +   F  +       +
Sbjct: 170 ARARELGMSRSTFANSSGLPHPDNKMTVRELAALARHIILTYPDFYKLFGEREFTWNKIR 229

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +    GADG+KTG+T   G+ +V S +Q    LI V+ G    + R   +  L
Sbjct: 230 QSNRNALLAAMDGADGLKTGYTKEGGYGLVGSVVQNGTRLIVVVNGLESADYRLTAARKL 289

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEA 313
           L  GF N   R          Y +    +  ++   V         +        ++  +
Sbjct: 290 LEWGFRNFEVRTLFAAEQPIGYAKVFGGDSGSVQVAVSDPVQVMVQKNGGDRLIARIVYS 349

Query: 314 KDKESHFIDFEKITLLK 330
               +     + I +++
Sbjct: 350 GPVRAPIAPGQPIGVVR 366


>gi|197303542|ref|ZP_03168581.1| hypothetical protein RUMLAC_02264 [Ruminococcus lactaris ATCC
           29176]
 gi|197297540|gb|EDY32101.1| hypothetical protein RUMLAC_02264 [Ruminococcus lactaris ATCC
           29176]
          Length = 402

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/363 (26%), Positives = 158/363 (43%), Gaps = 29/363 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------------------AETNKLPYYTLLDTNTGHVI 42
           +++ L ++ + + +  F  +                    A     P   L++  TG V+
Sbjct: 4   IKKLLAVMLICIQTLQFSMVPNVLAEETTTTPGTEQTSDTAVEVTAPSAILMEMTTGTVL 63

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
            E   D    PAS+TK+MT  ++F  L E K  L   +T S+ AS    S    + G   
Sbjct: 64  YEKDADTARPPASVTKVMTMLLIFDALAEGKIQLEDEVTTSEYASSMGGSQVFLETGEKQ 123

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T++  LK + V SAND  VA+AE +   E++FV+ MN  ++ LG+  THF+N +G+   G
Sbjct: 124 TVETLLKCISVASANDACVAMAEYISGNEEEFVRQMNLRAEGLGMKHTHFVNCNGLDAEG 183

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGAD 214
           H T+ARD+A++S  +   +P+  +Y  I    I              NTN  +  +  A 
Sbjct: 184 HETSARDIALMSRELLLKYPEIHNYCTIWMENITHTTSKGSSEFGLTNTNKLIRQYEYAT 243

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN---KTDRK 271
           G+KTG T  + F + A+A +   SLIAVI+GA D   R K + +LL+ GF      TD  
Sbjct: 244 GLKTGSTGKAKFCVSATAEKNGVSLIAVIMGAEDSKARFKDAVTLLNYGFGKCQMYTDEN 303

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
             +            +      ++         N N      +  +      +K   +  
Sbjct: 304 MPSLDPISVTGGIQESISLEYEKKFTYLDTTGANLNAVTSRLQIPDKVNAPVKKGDTVGQ 363

Query: 332 KIT 334
           +I 
Sbjct: 364 RIY 366


>gi|260892753|ref|YP_003238850.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ammonifex degensii KC4]
 gi|260864894|gb|ACX52000.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ammonifex degensii KC4]
          Length = 381

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 75/346 (21%), Positives = 141/346 (40%), Gaps = 11/346 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+  + +   +  ++    S A      +       L++ + G ++ E         AS
Sbjct: 1   MRRKALFLTTLLAFSLLVANSRACASPFLSTTAKSAVLMEAHHGQILGEKELHRKQPIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           + KLMT  +    +++ K  L   +T S++A+    S         M+  + L  +   S
Sbjct: 61  MVKLMTLLLAVEAVEQGKVRLADKVTASEHAASMGGSQIFLAPEEVMSFRDLLIAVATAS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND +VA+AE +  +E+ FV  MN  ++ LG+  TH++NA G+   G Y+TA D A+L  
Sbjct: 121 ANDASVAVAEHVAGSEEAFVAAMNAKARALGMENTHYVNATGLPAEGQYSTAYDQALLLR 180

Query: 176 RIKTDF-PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                     +   +   L     K  NTN  +  + G    KTG+T  +G+ + ++A +
Sbjct: 181 EALKHPLFLELAQIKEYSLRGGKFKLYNTNKLLWWYRGTIAGKTGWTEEAGYCLASAAKR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVP 290
              +LI V+LG  +  +  + S  + + GF        +    +       +        
Sbjct: 241 QGLTLITVVLGCPEPRSHFRESIKIYNWGFARYQAVPLLPEGARVATLPVEKGMEDRVDI 300

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             S EV        +     ++A+   S     ++   +   I K+
Sbjct: 301 LTSREVVLVVPRGED-KGITQQAELPRSLKAPLQQGEKVGYWIVKQ 345


>gi|28199163|ref|NP_779477.1| penicillin-binding protein 6 precursor [Xylella fastidiosa
           Temecula1]
 gi|182681894|ref|YP_001830054.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa M23]
 gi|28057261|gb|AAO29126.1| penicillin-binding protein 6 precursor [Xylella fastidiosa
           Temecula1]
 gi|182632004|gb|ACB92780.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa M23]
 gi|307578148|gb|ADN62117.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 396

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 84/317 (26%), Positives = 154/317 (48%), Gaps = 11/317 (3%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-- 88
           + ++D  +G V+A         PASLTK+MT+YV+ + +K  K      + +++NA    
Sbjct: 47  WVVMDYASGQVLAGENIHTHLAPASLTKVMTSYVIAAEIKNGKVHRDDQVMMTENAWRKG 106

Query: 89  ---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S S F    T  L++  + +IV+S ND A+A+A+ +  +E+ F   MN+ ++ +
Sbjct: 107 GAGTDGSYSGFPVNKTARLEDMEQGMIVQSGNDAAIALAQHVAGSEEAFASLMNSYAQRI 166

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G+  +HF++A G+   GHY++A DMA+L   +  DFP+   Y ++K L + G K  N N 
Sbjct: 167 GMKNSHFVDATGLSAEGHYSSAYDMALLGRALIRDFPETYAYNKVKELVVNGIKQSNRNL 226

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +      DG+KTG T  +G+ I+ SA +GDQ ++ V++G +    R + S +LL+ GF 
Sbjct: 227 LLWRDPSVDGIKTGHTSEAGYCIINSAKRGDQRILTVVMGDVSEKKRAEDSLALLNWGFR 286

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEAKDKESH 319
                            +    +V  +   V         +    +    ++  ++ E+ 
Sbjct: 287 FFETHTLYEPGKVVTKHKIWKGQVSEVQLGVPRPLFVTVQRGRYNDLKPSIEVPRNLEAP 346

Query: 320 FIDFEKITLLKNKITKK 336
               + +  +K  +  K
Sbjct: 347 IKPGQSVGKVKVTLDGK 363


>gi|110678603|ref|YP_681610.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter
           denitrificans OCh 114]
 gi|109454719|gb|ABG30924.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter
           denitrificans OCh 114]
          Length = 485

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/322 (32%), Positives = 160/322 (49%), Gaps = 4/322 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L   A+  +  I P  + A         ++D  TG V+     D   +PASLTK+MT Y+
Sbjct: 13  LYAFAVLWMLVILPLTAAAAPYAA---FVMDARTGEVLHSRNADTRLHPASLTKMMTLYI 69

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L T + IS+ A+  PPS    K G  +     ++   +KSAND A AI 
Sbjct: 70  AFQAVENGEISLDTKVKISRFAAAEPPSKLGLKSGQRIAFRYLIRAAAIKSANDAATAIG 129

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E+L  +E  F + MN T+K LG++ T F NAHG+ + GH +TARDM++L   +  D+P+Y
Sbjct: 130 EALEGSEAAFARRMNRTAKELGMTRTTFKNAHGLTESGHMSTARDMSLLGRHVLYDYPEY 189

Query: 185 MHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +      +   NTN   +  + GADG+KTG+T A+GFN+VASA +G + +IA +
Sbjct: 190 YNLFSRRSTHAGVRDVANTNRRLLAAYRGADGIKTGYTRAAGFNLVASAERGQERIIATV 249

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
            G      RNK  A LL MGF     R  +    K  Y         + +    + + +I
Sbjct: 250 FGGTSTIARNKRVAELLDMGFKRAPSRATVRKPKKPSYFATRHQGTRDATIMTASLRPQI 309

Query: 304 INYNTQMKEAKDKESHFIDFEK 325
                 ++   + E      E+
Sbjct: 310 RPLVAAVESPVNAEDIIAAVEQ 331


>gi|238790457|ref|ZP_04634227.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia frederiksenii
           ATCC 33641]
 gi|238721483|gb|EEQ13153.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia frederiksenii
           ATCC 33641]
          Length = 383

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 87/328 (26%), Positives = 139/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 12  VNLKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADVRRNPASLTKMMTSYVIGQAIKAGK 71

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 72  IGPEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 131

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN    LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 132 AGSQDSFVNLMNNYVNALGLKNTHFKTVHGLDAEGQFSSARDMALIGQALIRDVPDEYAI 191

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 192 YKEKEFTFNNIRQTNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATDGQMRLISAVLGG 251

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 252 HTFKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDVYLTIPR 311

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 312 GRMKDLKASYVLNTPEIHAPLAKNQVVG 339


>gi|110802732|ref|YP_699090.1| penicillin-binding protein dacf precursor [Clostridium perfringens
           SM101]
 gi|110683233|gb|ABG86603.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens SM101]
          Length = 402

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 84/357 (23%), Positives = 158/357 (44%), Gaps = 22/357 (6%)

Query: 1   MRQFL-------VIIAMAMLSNIFPFLSI-AETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++       + +++  + +  P  +  A   +     L++ +TG +I E   +  + 
Sbjct: 1   MKKYIRKIAAFSIFLSLFSIVSSVPVKAEEAIEVEARSALLMEASTGKIIYEKNANEKFA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TK+MT  +    +   +  L+  IT+S+ A +   S      G   T++  +K + 
Sbjct: 61  PASVTKVMTMLLAMEKVDRGEIKLSDQITVSETAKKMGGSTMLLDVGEVRTVEEIIKGIG 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVA+AE L  +E  FV+ MN  ++ LG+  T F N  G+   GH +TA D++I
Sbjct: 121 IASGNDAAVAMAEYLGGSESGFVEMMNKRAEELGMKNTTFKNCTGLPIEGHLSTAYDISI 180

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +S  +            +   I        +  N N  V  F G DG+KTGFT  + + I
Sbjct: 181 MSRELLKHPTILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTNDAKYCI 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
            A+A +    +++VI+GA     RN+ ++ L++ GF     ++      +       Q  
Sbjct: 241 SATATRDGVRMLSVIMGAPTFKIRNRDASMLMNYGFSKFESKQVATKDGEIEQIPMNQTG 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
               +     ++     + ++   + K      + K KE   I + +  L    + K
Sbjct: 301 DKFIIGKAKNDLTLVCPKGMSDKIEKKVVLDESKKKIKEFDTIGYCEYYLDGELLGK 357


>gi|157369441|ref|YP_001477430.1| D-alanyl-D-alanine carboxypeptidase fraction A [Serratia
           proteamaculans 568]
 gi|157321205|gb|ABV40302.1| Serine-type D-Ala-D-Ala carboxypeptidase [Serratia proteamaculans
           568]
          Length = 428

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 87/330 (26%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   LK  K
Sbjct: 57  VNIKTMIPGVPQIDAESYVLIDYNSGKVLAEMNADARRDPASLTKMMTSYVIGQALKAGK 116

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ ++A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 117 IGQEDMVTVGQDAWATGNPVFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 176

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN     LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 177 AGSQDAFVNLMNTYVSKLGLQNTHFQTVHGLDAQGQYSSARDMALIGQALIRDVPDEYAI 236

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA +G   LI+ +LG 
Sbjct: 237 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATEGQMRLISAVLGG 296

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 297 RTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDADRVELGVDKDVYLTIPR 356

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++ + 
Sbjct: 357 GRMKDLKASYVLNTPEIHAPLAKNQVVGSI 386


>gi|92119190|ref|YP_578919.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrobacter hamburgensis
           X14]
 gi|91802084|gb|ABE64459.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrobacter hamburgensis
           X14]
          Length = 455

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 107/297 (36%), Positives = 169/297 (56%), Gaps = 3/297 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++A  ++  I P  +   T     + L++ +TG V+      +PW PASLTK+MTAYV 
Sbjct: 23  IVLAAGLIVAIAPLRAAHAT---EAHLLIEADTGKVLEAENATYPWYPASLTKMMTAYVT 79

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
            + +K+ +  L T  T+S  A+   PS   F+ G+ +T+DNALK+++VKSAND+AV +AE
Sbjct: 80  LTAVKQGRITLDTLFTVSPTAAAQSPSKMGFRPGTQVTVDNALKMMLVKSANDMAVVLAE 139

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +   F   MN T++ LG++ T ++N +G+   G  T+ARD+ IL+  I  D P+Y 
Sbjct: 140 GVGGSIDGFSAEMNATAQRLGMTQTSYVNPNGLPADGQITSARDLGILARAIIHDLPEYE 199

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
           ++ +I  +    +   N N  +G F GADG KTGF CASG+N+V SA Q  + LIAV+LG
Sbjct: 200 YFMRIPSIRYGRRVTRNFNKLIGRFPGADGFKTGFICASGYNLVGSATQNGKRLIAVVLG 259

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           A     R    A +L  GF N T       +        ++   PN+ +E+C  +++
Sbjct: 260 ASSGTMRAVRVAQMLERGFANNTLSWLRPALGTVDKLAPIAAAPPNLRDEMCGPKRK 316


>gi|56961794|ref|YP_173516.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
 gi|56908028|dbj|BAD62555.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
          Length = 429

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 135/366 (36%), Gaps = 39/366 (10%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + +   +L  I P  + + T       +++ +TG ++ E   D     AS+TK+MT Y+V
Sbjct: 4   LAMLAFVLGPIKPASAQSLTVDASAAIVVNADTGQILFEQNSDEQLAIASMTKMMTEYIV 63

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              +          +TI+ +                      +K L    A   A A   
Sbjct: 64  LESIANGDISWEDEVTITDHLLPLSHQRELSNVPLRQDYTYTVKDLYESMAIYSANASTM 123

Query: 126 ----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTA 167
                +  TE +FV  MN  ++ LGL    F+NA G+                     +A
Sbjct: 124 ALAEHVAGTEAQFVAKMNEKAEELGLEKYEFINASGLNNADLQGEHPEGTPADGETTLSA 183

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKT 218
           R +A L++ +  DFP+ +    +                N NW        + G DG+KT
Sbjct: 184 RSVAQLAYHLLKDFPEVLDTASVPEAVFDSGPDEKIDMQNWNWMLPNSPHYYEGVDGLKT 243

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+T A+G +  A+A +    LI V++G   R+ R   +  LL  GF    + + I+   +
Sbjct: 244 GYTDAAGNSFTATAERDGVRLITVVMGTDTRDDRFNETKKLLDYGFSQFEEHRIIDAGTE 303

Query: 279 D-----FYQQNLSNEVPNISEEVC---TTQKEIINYNTQMKEAKDKESH----FIDFEKI 326
                    +    EV  ++         + +  NY+ +++  + K +         E+ 
Sbjct: 304 PEGGVVPVARGKEKEVQLVTNRDLTFMLGKGQNENYSVEIELDESKTNENGELVAPIEEG 363

Query: 327 TLLKNK 332
             +   
Sbjct: 364 ETVGTL 369


>gi|169333947|ref|ZP_02861140.1| hypothetical protein ANASTE_00333 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259512|gb|EDS73478.1| hypothetical protein ANASTE_00333 [Anaerofustis stercorihominis DSM
           17244]
          Length = 392

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 87/353 (24%), Positives = 157/353 (44%), Gaps = 19/353 (5%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIAE--------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++ + +I++ +++     F+   E          +     L+D  TG V+ E   D   
Sbjct: 2   LKKIVSLILSFSLIFTSSSFVFAKEESKNEVDMDIQSKSVVLMDVGTGKVLYEKNKDEKL 61

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS+TK+MT  ++   +  K   ++  +TIS  AS+   S    ++G   ++D  L  +
Sbjct: 62  PLASVTKVMTILLILEAVNNKTINMSDMVTISDYASKMGGSQLFMEEGEMRSVDELLNAI 121

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           I++SAND   A+ E +  + +KFV  MN+ +K LG+  +HF+N++G+    HY++A D+A
Sbjct: 122 IIESANDACAAMGEFVGGSIEKFVLMMNDRAKELGMKNSHFVNSNGLPADDHYSSAYDIA 181

Query: 172 ILSWRIKTDFP------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +++  +            +    +I     K +   NTN  +      DG+KTG+T  +G
Sbjct: 182 LMTKEVCKYPDIFKISSTWQKTIKIGKKNDKERTLSNTNKLLRMNDKVDGLKTGYTADAG 241

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFY 281
             I A+  +GD  LIAVIL A D  TR   +  LL+ GF        +         +  
Sbjct: 242 HCISATGKEGDLRLIAVILHAPDSKTRFAEANKLLNYGFSTYKAENVVEKDKAVADVEVN 301

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           + N         + + T   +  N   +     D +      +K   L + I 
Sbjct: 302 KGNKDKVSAVAKDNISTLMNKNENKEYKSDVKLDNKKINAPVKKGDKLGSVIV 354


>gi|83589906|ref|YP_429915.1| Serine-type D-Ala-D-Ala carboxypeptidase [Moorella thermoacetica
           ATCC 39073]
 gi|83572820|gb|ABC19372.1| Serine-type D-Ala-D-Ala carboxypeptidase [Moorella thermoacetica
           ATCC 39073]
          Length = 385

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 90/335 (26%), Positives = 147/335 (43%), Gaps = 19/335 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L ++    L +     +       P   L++ +TG V+ E        PAS TK+MTA 
Sbjct: 10  ILALVVFCFLGSSPVKAADELQITAPAAVLMEASTGQVLYERGAREKRPPASTTKIMTAI 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     +     L TPI +S+NA+  P ++   +KG  +TL + +K  +++S ND  VAI
Sbjct: 70  LALELGR-----LDTPIKVSENAATTPGASIYLQKGEVLTLGDLVKGALLESGNDATVAI 124

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE L  +E  F   MN  +  LG   THF N +G+   GHYT+A D+A+++     +   
Sbjct: 125 AEGLAGSEAGFAFLMNRKAWLLGARTTHFNNPNGLPDPGHYTSAYDLALIARYALGNPVF 184

Query: 184 YMHYFQIKGL---EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                 ++         +   NTN  + ++ GADG+KTG T A+G  +VASA +G + LI
Sbjct: 185 RRLVATVEDQIPGPDGVRHLYNTNRLLESYPGADGVKTGTTAAAGQCLVASATRGGRQLI 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPNISEE 295
           AV+LG+ D   R   + +LL  GF N         + +  +     +       P +   
Sbjct: 245 AVVLGSAD---RYGDTRTLLDYGFKNFYCEMVKAGEPLGQVYIPNGEMTSIGVAPAMDAG 301

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                        ++   +   +      K   L 
Sbjct: 302 FTAPLARSGQLEKKVLLPR---AARAPVRKGQELG 333


>gi|121535743|ref|ZP_01667545.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosinus
           carboxydivorans Nor1]
 gi|121305642|gb|EAX46582.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosinus
           carboxydivorans Nor1]
          Length = 378

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 19/342 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R+ L+   +A+L       S           +++ +TG V+     +    PAS TK+M
Sbjct: 2   LRRGLIPWLIALLVLPNTGWSAPLDLTAKSAIVIEASTGKVLYAKDAETKRYPASTTKMM 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  V           L   +T S NA+    S+     G  + L + L  +++ S ND  
Sbjct: 62  TLIVALEH-----GNLNDIVTTSANAASTEGSSLWLAPGEQLKLLDMLYGVMLVSGNDAT 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  + +KF + M   +  +G + T+F N+ G+    HYTTA D+A ++     +
Sbjct: 117 VAVAEHISGSVEKFARLMTEKAHAIGATNTNFTNSSGLPDPNHYTTAHDLAKIAAYGYKN 176

Query: 181 FPQ-----YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                     H       +   +   N N  +  + GA+G+KTG+T A+G  +V+ A + 
Sbjct: 177 PFFAEIVSTKHKVIPWPGKDHDRDLYNENKMLWLYDGANGVKTGYTEAAGPCLVSGAKRN 236

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYN------KTDRKKINYIIKDFYQQNLSNEV 289
           +  LIAV+L +       + S +LL  GF              +  +  +  +Q     V
Sbjct: 237 NIQLIAVVLDS---ERMWEESMALLDYGFKQVKPMVLFNQGDIVKTVRVNNGKQETVRLV 293

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
              S  V  +  +   + T ++     E+  +  +K+ ++K 
Sbjct: 294 TKASSIVPVSADDKDQFRTVVEAPAKLEAPVVAGQKVGVVKT 335


>gi|238762884|ref|ZP_04623852.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia kristensenii
           ATCC 33638]
 gi|238698895|gb|EEP91644.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia kristensenii
           ATCC 33638]
          Length = 403

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 88/328 (26%), Positives = 139/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 32  VNLKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 92  IGPEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  T F   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDSFVNLMNNYVKALGLQNTQFKTVHGLDAEGQYSSARDMALIGQALIRDVPDEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 272 HTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 332 GRMKDLKASYVLNTPEIHAPLAKNQVVG 359


>gi|297183970|gb|ADI20090.1| d-alanyl-d-alanine carboxypeptidase [uncultured alpha
           proteobacterium EB080_L06A09]
          Length = 481

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 156/318 (49%), Gaps = 7/318 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I+ + +L                   ++D  TG V+     D   +PASLTK+MT Y+ 
Sbjct: 9   FILVVVLLFTGVSVYGAP-----YAALVMDARTGEVLHSRNADTRLHPASLTKMMTLYLA 63

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  ++     L   + +S+NA+  PPS    + G  + + + ++   VKSAND A A+ E
Sbjct: 64  FKAVESGHLSLDEKVKVSRNAASEPPSKLGLRTGMRVKVRHLIRAAAVKSANDAATALGE 123

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           ++  +E KF   M   +K LG+  T F NAHG+   GH +TARDM+IL   +  DFP Y 
Sbjct: 124 AIAGSEVKFTTLMTAQAKALGMKRTTFKNAHGLTAKGHLSTARDMSILGRHLMYDFPDYY 183

Query: 186 HYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           + F  +  +   +  PNTN   +  + GADG+KTG+T A+GFN+V+SA +G++ +IA + 
Sbjct: 184 NLFSRRNTDAGLRTVPNTNRRLLANYKGADGIKTGYTNAAGFNLVSSAQRGNKRIIATVF 243

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEI 303
           G     +RN   A LL MGF     +     I     + N    V  I    V      I
Sbjct: 244 GGRTWKSRNARVAELLDMGFNRTPKKYTSTAIPARPTRGNQLESVALILPGNVSIKSPRI 303

Query: 304 INYNTQMKEAKDKESHFI 321
           I+ + + K   + +   I
Sbjct: 304 ISSSPRPKIRPNFDKKII 321


>gi|320539093|ref|ZP_08038764.1| putative D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein 5) [Serratia symbiotica str. Tucson]
 gi|320030731|gb|EFW12739.1| putative D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein 5) [Serratia symbiotica str. Tucson]
          Length = 403

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   LK  K
Sbjct: 32  VNIKTMIPGVPQIDAAAYILIDYNSGKVLAEMNADARRDPASLTKMMTSYVIGHTLKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ ++A                + G  +++    + + ++S ND  VA+A+ +
Sbjct: 92  IGQEDLVTVGQDAWATGNPVFKGSSLMFLRPGDRVSVAKLSRGINLQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN     LGL  THF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVNLMNTYVNKLGLQNTHFQTVHGLDAQGQYSSARDMALIGQALIRDVPDEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATAGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  N       + ++V  T   
Sbjct: 272 RTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGNDDRVDLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +         K  ++ N 
Sbjct: 332 GRMKDLKASYVLNTPEIHAPLSKNQVVGNI 361


>gi|312797424|ref|YP_004030346.1| D-alanyl-D-alanine serine-type carboxypeptidase [Burkholderia
           rhizoxinica HKI 454]
 gi|312169199|emb|CBW76202.1| D-alanyl-D-alanine serine-type carboxypeptidase (EC 3.4.16.4)
           [Burkholderia rhizoxinica HKI 454]
          Length = 403

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 15/333 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                       + L+D ++   +A    D    PASLTKLMT+Y+VF  LK KK  +  
Sbjct: 37  AQVPPPAVNARSWVLVDASSAQTLASANADERVEPASLTKLMTSYLVFDALKTKKISMDQ 96

Query: 79  PITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            +   +         S    +    +T+ + +  +IV+S ND A+A+AE +  +E  FVQ
Sbjct: 97  TVMPGEAVRRVGTDESRMFIEANKPVTVHDLVYGMIVQSGNDAAIALAELVGGSEAHFVQ 156

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG+  TH+ + +G+    HYT+A D+A+LS  +  D+P+Y   F +K     
Sbjct: 157 MMNEAAQKLGMKNTHYADVNGMPNPQHYTSAADLAVLSAHLIRDYPEYYSIFAVKDFTYN 216

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDR 249
             K  N N  +      DG+KTG T A+G+ ++ASA +         + L++V++G    
Sbjct: 217 KIKQLNRNRLLWIDPTVDGLKTGHTKAAGYCLIASAKRPLPGVPDASRRLVSVMMGEPKE 276

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVP---NISEEVCTTQKEI 303
           + R + S  +L+ G+      +       I      + L N VP      + +   +   
Sbjct: 277 HDRTQDSLKMLNYGYTAYDTVRLYKANQVIDSPRVYKGLQNAVPVGVKSDQYITVPKGVG 336

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 ++          D + +  +K     K
Sbjct: 337 DKIKPVLERHGPLVGPIADGQVVGTVKVVADGK 369


>gi|332091585|gb|EGI96666.1| D-alanyl-D-alanine carboxypeptidase dacD [Shigella dysenteriae
           155-74]
          Length = 301

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/293 (30%), Positives = 141/293 (48%), Gaps = 15/293 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L+I A   + N+         PF           + L+D  TG ++         N
Sbjct: 1   MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++
Sbjct: 121 LSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           A D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +G
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           FN++AS + G + LIAV++GA     R + +  LL  G  N T  + ++   K
Sbjct: 241 FNLIASGVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKK 293


>gi|213619044|ref|ZP_03372870.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 305

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 14/301 (4%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           ++ASA+ G + LIAV++GA     R + +  LL  G  N    + ++   K   ++    
Sbjct: 245 LIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSERIWYG 304

Query: 288 E 288
           E
Sbjct: 305 E 305


>gi|283785832|ref|YP_003365697.1| penicillin-binding protein 6B [Citrobacter rodentium ICC168]
 gi|282949286|emb|CBG88897.1| penicillin-binding protein 6B [Citrobacter rodentium ICC168]
          Length = 390

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 86/316 (27%), Positives = 138/316 (43%), Gaps = 11/316 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           F       +   + L+D  TG ++         NPASLTKLMT YVV   +   +     
Sbjct: 29  FAPQPPAIEAGSWVLMDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRISPDD 88

Query: 79  PITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +T+ ++A                K+G  +++ +  + LIV S ND  VA+A+ +   + 
Sbjct: 89  IVTVGRDAWAKDNPVFVGSSLMFLKQGDRVSVRDLSRGLIVDSGNDACVALADYVAGGQP 148

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MNN  K L L  THF   HG+   G +++A D+A+LS  I    P++ H +  K 
Sbjct: 149 QFVAMMNNYVKKLHLQDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKS 208

Query: 193 LEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           L   G    N N       L  DG+KTG T  +GFN++ASA+ G + LIAVI+GA     
Sbjct: 209 LTWNGITQYNRNGLLWDKSLNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVIMGAQSPKG 268

Query: 252 RNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R + +  LL  G  N    + +        +  +  +         ++      +    +
Sbjct: 269 REEQARKLLHWGQQNFDTVQILRNGKQVGTERIWYGDKEKIALGTEQDFWMALPKTEIPH 328

Query: 308 TQMKEAKDKESHFIDF 323
            + K   D ++     
Sbjct: 329 IKAKYVLDTKALEAPI 344


>gi|254438085|ref|ZP_05051579.1| D-alanyl-D-alanine carboxypeptidase family [Octadecabacter
           antarcticus 307]
 gi|198253531|gb|EDY77845.1| D-alanyl-D-alanine carboxypeptidase family [Octadecabacter
           antarcticus 307]
          Length = 471

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 97/300 (32%), Positives = 145/300 (48%), Gaps = 14/300 (4%)

Query: 1   MRQ---------FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++          L++  + M +      + A         ++D  TG ++     D   
Sbjct: 1   MKRRIQHPALAGILLLFTLLMAALAPVTGNSAP----YAAMVMDARTGEILHSRNADTQL 56

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
           +PASLTK+MT Y+ F  ++  +  L   ITI+  A+  P S      G  +     ++  
Sbjct: 57  HPASLTKMMTLYIAFQAVERGEISLDDMITITPLAASEPASKLWLAAGQRIQFRYLIRAS 116

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            VKSAND A AI  +L   E  F + M  T++ +G+S T F NAHG+ + GH +TARDM 
Sbjct: 117 GVKSANDAATAIGIALEGNEAAFARRMTATARAMGMSRTTFRNAHGLTETGHMSTARDMT 176

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVA 230
           +L   +  DFPQY + F     +    +  NTN      + GADG+KTG+T A+GFN+VA
Sbjct: 177 VLGRHMIYDFPQYYNIFSRLTTDAGVSQVSNTNRRFLNAYRGADGIKTGYTRAAGFNLVA 236

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           SA +G + +IA + G      RN   A LL MGF       +IN       Q +   + P
Sbjct: 237 SAERGQERIIATMFGGTSTAQRNARVAELLDMGFARAPTTARINRPSPVPAQGSGGADTP 296


>gi|90425548|ref|YP_533918.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB18]
 gi|90107562|gb|ABD89599.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB18]
          Length = 476

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 102/290 (35%), Positives = 159/290 (54%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     L++ +TG V+      +PW PAS+TKLMTAYV    +KE +  L T +T
Sbjct: 19  TPRAAQAEALLLIEADTGKVLQAENATYPWYPASVTKLMTAYVTLKAIKEGRITLDTLLT 78

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S  A+   PS   F+ G+ +T+DNALK+++VKSAND+AV +AE +  +   F   MN+ 
Sbjct: 79  VSPTAASQSPSKMGFRAGTQLTVDNALKMMLVKSANDMAVVLAEGVGGSIDGFSAMMNDN 138

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LG++ T ++N +G+   G  T+ARD+ IL+  I  D P+Y ++  I  +    +   
Sbjct: 139 AQRLGMTQTSYVNPNGLPADGQITSARDLGILARAIIRDLPEYEYFVHIPSIRFGKRVTQ 198

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           N N  +G + GADG KTGF CASGFN+VASA +  + LIAV+LGA     R   +A LL 
Sbjct: 199 NFNRLIGRYPGADGFKTGFICASGFNLVASATRDGKRLIAVVLGAPSSQARALKAAQLLE 258

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            GF           +        +    PN+ +E+C  +++    +   +
Sbjct: 259 RGFSANQLTWLRPALGTVDNLAPIDAAPPNLRDEMCGPKRKRPASDESEE 308


>gi|56417129|ref|YP_154203.1| hypothetical protein AM1091 [Anaplasma marginale str. St. Maries]
 gi|56388361|gb|AAV86948.1| hypothetical protein AM1091 [Anaplasma marginale str. St. Maries]
          Length = 380

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 8/343 (2%)

Query: 1   MRQFLV-----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +R+FL+           L+   P  ++    K P+  + +  +  V+ E+  D    P+S
Sbjct: 2   IRRFLLSFLVPAFCCLALAPARPSYALKMHTKAPHAIVYELGSRTVLFEHDADVAAAPSS 61

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KLMT Y+VF  L      +    ++S++A +   S++  K G  + + + +    V S
Sbjct: 62  MSKLMTLYLVFQHLHAGLIKMDDTFSVSESAWKRGGSSAFLKVGQMVKVRDLIMGAAVSS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  +A+AE +  ++++FV+ +N+ +K + L+ + F N  G    GH  + RD+  LS 
Sbjct: 122 GNDACIALAEGVSGSQEQFVEDINSLAKEMNLAHSSFTNVTGWPDEGHLMSVRDILTLSV 181

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           RI  DFP+Y H F  K     G    N N  +   +G DG+KTG T  +G+ I ASA + 
Sbjct: 182 RIFEDFPEYYHVFGEKQFTYNGVTQKNYNTLLNYNIGVDGIKTGHTEKAGYGIAASAQKD 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           ++ +  V+ G      R   +  LL   F     +          +          V   
Sbjct: 242 NRRVFVVVNGLKTETERAYETKRLLLYAFNRFETKVVFPAGSVVGEVKVWNGRKGTVQMH 301

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +            +       K +     +K   +     +
Sbjct: 302 VRDDVVISYPRDLSKSVKAFVSYKSTVAAPVKKGQEIGTLSVQ 344


>gi|332160854|ref|YP_004297431.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604756|emb|CBY26254.1| D-alanyl-D-alanine carboxypeptidase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665084|gb|ADZ41728.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863383|emb|CBX73505.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia enterocolitica
           W22703]
          Length = 403

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/328 (26%), Positives = 139/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 32  VNLKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 92  IGPEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  T F   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDSFVNLMNNYVKALGLQNTQFKTVHGLDAEGQYSSARDMALIGQALIRDVPDEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATDGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 272 HTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 332 GRMKDLKASYVLNTPEIHAPLAKNQVVG 359


>gi|163744788|ref|ZP_02152148.1| D-alanyl-D-alanine carboxypeptidase family protein [Oceanibulbus
           indolifex HEL-45]
 gi|161381606|gb|EDQ06015.1| D-alanyl-D-alanine carboxypeptidase family protein [Oceanibulbus
           indolifex HEL-45]
          Length = 491

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/278 (34%), Positives = 150/278 (53%), Gaps = 4/278 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L + A   +  I P  ++A         ++D  TG  I     D   +PASLTK+MT Y+
Sbjct: 13  LFLFAAFWVLVILPLSAMAAP---YAAYVIDARTGKEIHAENADTRLHPASLTKMMTLYI 69

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L T +TIS+NA+  PPS    + G  + L   ++   VKSAND A AI 
Sbjct: 70  AFQAVERGELSLDTQVTISQNAASEPPSKLGMRPGQKIALRYLIRAAAVKSANDAATAIG 129

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E  F + MN T+K LG++ T F N HG+ ++GH +TARDM  +   +  D+PQY
Sbjct: 130 EAIEGSEAAFARRMNRTAKQLGMTRTTFKNMHGLTENGHLSTARDMTAMGRHLLYDYPQY 189

Query: 185 MHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F     +   +K  +TN    G++ GADG+KTG+T A+GFN+ ASA +G++ +I  +
Sbjct: 190 YNLFSRITADAGVRKVSHTNRRFLGSYKGADGIKTGYTRAAGFNLTASAERGNERIIVTV 249

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
            G     +RN   A L+ +GF        ++  +   Y
Sbjct: 250 FGGNSTASRNAKVAELMDLGFRRAPSSAPLSKPVPPVY 287


>gi|308187437|ref|YP_003931568.1| DD-carboxypeptidase, penicillin-binding protein 6B [Pantoea vagans
           C9-1]
 gi|308057947|gb|ADO10119.1| DD-carboxypeptidase, penicillin-binding protein 6B [Pantoea vagans
           C9-1]
          Length = 388

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 148/348 (42%), Gaps = 17/348 (4%)

Query: 2   RQFLVIIAMAML------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           R+ L  +   +       ++  PF           + L+D  TG V+    PD   NPAS
Sbjct: 4   RRLLFTVTATVFWASLAQADAIPFPVTPPAIDAASWVLMDATTGQVLTAGNPDERRNPAS 63

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALK 109
           LTKLMT YVV   + +KK      +T+ K+A                K G  +++ +  +
Sbjct: 64  LTKLMTGYVVDRAIDQKKISRDDMVTVGKDAWAAGNPVFKGSSLMFLKPGDKLSVRDLSR 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            +I+ S ND  VA+A+ +  +E  FV  MN+  + LGL  THF   HG+   G Y++A D
Sbjct: 124 GVIIDSGNDACVALADYVAGSEANFVGMMNHYVEKLGLQNTHFETVHGLDAPGQYSSALD 183

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNI 228
           MA LS  I    P +   +  K L   G    N N       L  DG+KTG T  +GFNI
Sbjct: 184 MAKLSRAIIDGEPDFYAMYSEKTLSWNGITQNNRNGLLWDNNLHVDGLKTGHTETAGFNI 243

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQN 284
           +AS + G   LIAV++G      R + +  LL  G       +  +   K    + +  N
Sbjct: 244 IASNVVGKHRLIAVVMGGKSPKGREEQARKLLVWGQNTFDTVQLFHAGKKIGSENVWYGN 303

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                   +E+V  +       N + K   D++      +   ++   
Sbjct: 304 PHQVEVGTAEDVYLSLPRSEVQNVKAKYVIDRKDLEAPLKANEVIGEI 351


>gi|94309170|ref|YP_582380.1| penicillin-binding protein 6 [Cupriavidus metallidurans CH34]
 gi|93353022|gb|ABF07111.1| D-alanyl-D-alanine carboxypeptidase [Cupriavidus metallidurans
           CH34]
          Length = 397

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 150/322 (46%), Gaps = 15/322 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + L D  +G  +A    D    PASLTKLMTAY+ F  LKEK+  L   +T +
Sbjct: 37  PQVAAKSWMLYDVTSGQALASQNADMRIEPASLTKLMTAYLAFEALKEKRLTLDQTVTPT 96

Query: 84  K--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                 +   S    + G  +++ + L  LIV+S ND ++A+AE++  +E+ FV  MN  
Sbjct: 97  DIVRKVKSDESRMFIEAGKPVSVQDLLLGLIVQSGNDASLALAEAVGGSEEGFVVMMNRE 156

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ +G+  THF N  GV    HYTTA D+AIL+ R+  DFP+Y   +  K       + P
Sbjct: 157 AQRMGMKNTHFTNTDGVPDPNHYTTAVDLAILTTRLIKDFPEYYSMYSQKEFTYNKIRQP 216

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNK 254
           N N  +      DG+KTG T ++G+ +++SA +       G + L+++++G      R +
Sbjct: 217 NRNRLLYIDPTVDGVKTGHTKSAGYCLISSAKRPLANVPNGSRRLVSIVIGTATEQIRTQ 276

Query: 255 VSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNT 308
            S  +L+ GF      +  +        D Y+         ++ E  V   +        
Sbjct: 277 ESLKILNYGFQFFDTLRLYDKGQVLATPDIYKGKTGTIKIGVANETFVTVPKGTGSRLKP 336

Query: 309 QMKEAKDKESHFIDFEKITLLK 330
            ++  +   +     +++  +K
Sbjct: 337 VLERQELLIAPITAGQQVGTVK 358


>gi|332981537|ref|YP_004462978.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mahella australiensis
           50-1 BON]
 gi|332699215|gb|AEE96156.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mahella australiensis
           50-1 BON]
          Length = 380

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 86/354 (24%), Positives = 144/354 (40%), Gaps = 26/354 (7%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++   FL+I  + M   +    +               +++  TG V+     D     
Sbjct: 1   MKRAVIFLLIFCVFMSPCLMISKALAVEDPPQISASVAAVMEVETGRVLYGKDADKRCPM 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MTA             L+  + +S NAS    S+   + G  +TL++ L  L++
Sbjct: 61  ASTTKIMTAITAIEC-----GDLSDIVEVSDNASGVEGSSIWLEVGERLTLEDLLYGLML 115

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD---- 169
           +S ND AVAIAE +  + +KFV  MNN +K +G   THF+N HG+    HYTTA D    
Sbjct: 116 RSGNDAAVAIAEHIGGSVEKFVDMMNNKAKEIGARNTHFVNPHGLPDEDHYTTAYDLALI 175

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            A               Y +I     +  +   N N  +  + GA+G+KTG+T  +G  +
Sbjct: 176 TAYAMKNPVFKQIVSTKYRKIPWEGHEWDRAMQNKNKLLWKYEGANGVKTGYTKEAGRCL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQN 284
           VA+A +    L+AV+L         + S +LL  GF N +  + +      I     +  
Sbjct: 236 VAAAYRNGMQLVAVVLN---DGPMWEDSMALLDYGFDNFSMYEVLPKDKTIIDVPVLRGK 292

Query: 285 LSNEVPNISEEVCTTQK--EIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +      +  V       E      +       E+     +    ++  +  +
Sbjct: 293 ENRVALKTARPVVIPVTDEERNRLRVEFHYPSAIEAPIAAGKDYGTVEVLLDGQ 346


>gi|254511090|ref|ZP_05123157.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacteraceae bacterium
           KLH11]
 gi|221534801|gb|EEE37789.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacteraceae bacterium
           KLH11]
          Length = 389

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/324 (25%), Positives = 143/324 (44%), Gaps = 8/324 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A         ++D  TG V+     D P  PAS++KLMT YV F  L++ +  L   
Sbjct: 21  PVHAFDTTARAAYVIDQKTGTVLLSKNADQPLPPASMSKLMTLYVAFEALRDGRLTLDET 80

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFVQH 137
           + +S++A  Y  S         + +++ L+ +IV S ND  V IAE+L     E  F + 
Sbjct: 81  LPVSEHAMSYGGSTMFLNTQDRVRVEDLLRGIIVLSGNDACVVIAEALSPDGSEAGFARF 140

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK- 196
           M   ++ +G++ ++F N++G    GH  +  D+A+L+ R+ TDFP+Y   F  +  E   
Sbjct: 141 MTQRAQQMGMNDSNFANSNGWPAAGHMMSVHDLAVLADRLITDFPEYYPLFAEEEFEFDG 200

Query: 197 --GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
                  N N  +   +GADG+KTG T  +G+ +V SA QGD+ ++ V+ G      R +
Sbjct: 201 RAPSNSRNRNPLLKLGIGADGLKTGHTQEAGYGLVGSAKQGDRRVVFVLSGLDSVGKRAE 260

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFY---QQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            + ++++  F N  +R                     V  + E+  T    +++      
Sbjct: 261 EAEAVVNWSFRNFVERTVAKADEPVAQARLWMGAEKTVGLVPEQDLTLLFPVLSDKDIKA 320

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
           E            K   L   + +
Sbjct: 321 EVVYDGPINAPVAKGQKLAELVIR 344


>gi|237809572|ref|YP_002894012.1| Beta-lactamase [Tolumonas auensis DSM 9187]
 gi|237501833|gb|ACQ94426.1| Beta-lactamase [Tolumonas auensis DSM 9187]
          Length = 413

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/332 (26%), Positives = 141/332 (42%), Gaps = 8/332 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M +     L          + L+D N+G ++     +    PASLTK+MT+YV+   LK 
Sbjct: 43  MPAPAPVALPSPPQISAKAHLLMDYNSGQILVGENTEERLPPASLTKMMTSYVIGQELKS 102

Query: 72  KKAMLTTPITISKNASEYPP---SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            +   T  +TIS+NA        S    + G  +++DN  K +I++S ND  +A+AE + 
Sbjct: 103 GRIKPTDMVTISQNAWAKNYGDSSKMFIEVGKQVSVDNLNKGIIIQSGNDACIAMAEHIA 162

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +E  F   MN  +  LG+S +HF+NAHG+    HY+TA DMA +   +  D P     +
Sbjct: 163 GSEDSFASLMNQWAAKLGMSNSHFVNAHGLHNVDHYSTAHDMARMGQALIRDLPNEYAIY 222

Query: 189 QIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILGA 246
             K     G    N N       L  DG+KTG     G+N+VASA       LI+VI+G+
Sbjct: 223 SQKDFTFNGITQHNRNRLLWDKTLVVDGIKTGHVSEVGYNLVASATGPEGMRLISVIIGS 282

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEI 303
                R + S  LL+ GF    + +      +           +E+   ++         
Sbjct: 283 NSEQQRAEESKKLLTYGFRFYQNIQPYKQGAELATQRIWMGDKSEIRLGTDRDINLLAPR 342

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +      + +         +K   +     +
Sbjct: 343 GSAAKMKADFQLTRDLHAPIQKGETVGTIFLR 374


>gi|146310825|ref|YP_001175899.1| D-alanyl-D-alanine carboxypeptidase fraction A [Enterobacter sp.
           638]
 gi|145317701|gb|ABP59848.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Enterobacter sp. 638]
          Length = 403

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 82/330 (24%), Positives = 140/330 (42%), Gaps = 11/330 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            NI   +          Y L+D N+G V+AE   D   +PASLTK+MT+YV+   +K  K
Sbjct: 32  LNIKTMIPGVPQIDAESYILIDYNSGKVLAEMNADSRRDPASLTKMMTSYVIGQAMKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              T  +T+  +A                K G  + +   ++ + ++S ND  VA+A+  
Sbjct: 92  FKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFA 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MN+    LGL  +HF   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDAFVGLMNSYVSALGLKNSHFQTVHGLDAEGQYSSARDMALIGQALIRDVPNEYTI 211

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G 
Sbjct: 212 YKEKEFTFNGIRQTNRNGLLWDNSLKVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + +++  T   
Sbjct: 272 RTFKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPVWFGDNDRASLGVDKDLYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + +     +        +K  ++   
Sbjct: 332 GRMKDLKASYVLNTSELHAPLKKNQVVGTI 361


>gi|123443220|ref|YP_001007194.1| D-alanyl-D-alanine carboxypeptidase fraction A [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090181|emb|CAL13044.1| putative penicillin-binding protein 5 [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 403

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/328 (26%), Positives = 139/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 32  VNLKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 92  IGPEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  T F   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDSFVNLMNNYVKALGLQNTQFKTVHGLDAEGQYSSARDMALIGQALIRDVPDEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTDAAGYNLVASATDGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++V  T   
Sbjct: 272 HTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDNDRVQLGVDKDVYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 332 GRMKDLKASYVLNTPEIHAPLAKNQVVG 359


>gi|304407014|ref|ZP_07388668.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus
           curdlanolyticus YK9]
 gi|304344001|gb|EFM09841.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus
           curdlanolyticus YK9]
          Length = 398

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 8/314 (2%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L+D ++G VI +        PAS+TK+MT  ++   L + +  LT  ++ S+ AS 
Sbjct: 49  RSAVLMDADSGTVIFDKNSHDRLPPASITKIMTMLLIMEALDDGRLKLTDKVSASEYASS 108

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    + G  M++D  +K + + S ND +VA+AE +  +E +FV+ MN  ++ LG+ 
Sbjct: 109 MGGSQIFLEPGEEMSVDEMIKGIALASGNDASVAMAEKIGGSEAEFVKMMNEKAQQLGMK 168

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTN 204
            THF N +G+    HY++A D+AI+S  +        +    +        K     NTN
Sbjct: 169 DTHFANCNGLPVADHYSSAHDIAIMSRELLKHTQITKYTGMYQDYLRKTSEKPFWLVNTN 228

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             V  + GADG+KTGFT  + F + A+A +    +IAV++G  +  TRN   +S+L   F
Sbjct: 229 KLVWFYTGADGLKTGFTNEAKFCLSATARRDGLRVIAVVMGEPNTKTRNAEVSSMLDYSF 288

Query: 265 YNKTDRKKINYIIKDFYQQNLSNEVP----NISEEVCTTQKEIINYNTQMKEAKDKESHF 320
              ++             +     VP      +       ++  + +    E K   +  
Sbjct: 289 AQYSNYSIFKQGDAIGKVKIEKGAVPELELKATHPYSVLMRKGASKDNIRYELKLNNALK 348

Query: 321 IDFEKITLLKNKIT 334
              +    +   + 
Sbjct: 349 APIKIGDPIGRIVV 362


>gi|86749795|ref|YP_486291.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris HaA2]
 gi|86572823|gb|ABD07380.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris HaA2]
          Length = 419

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/319 (25%), Positives = 131/319 (41%), Gaps = 8/319 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++       P   L+D  +G V+ E   D    P+S+ KLMT  +VF  L + +   T  
Sbjct: 51  VAGGYDTDAPSAILIDGESGSVLFEKNADELRAPSSMLKLMTVELVFHLLAKGEIKPTDE 110

Query: 80  ITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             IS+ A          S    +  S + +++ LK  I++S ND  +A+AE +  +E  F
Sbjct: 111 YKISEYAWRRGGAPAGNSTMFAEIHSKVAVEDLLKGAIIQSGNDSCIALAEGIAGSEPAF 170

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V+ M   ++ +GL+ + F N++G+   G+  + R++  L+  I   +P     F  K   
Sbjct: 171 VERMTKRAREIGLTQSTFANSNGLPDPGNKMSVRELGRLARHIIQTYPNDYKLFSEKEFT 230

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  N N  + TF GADG+KTG+T   G+ +V SA+Q    LI V+ G  D + R  
Sbjct: 231 WNKIRQTNRNPLLNTFNGADGLKTGYTKDGGYGMVGSAVQNGMRLIVVVNGIDDIDDRAS 290

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQ---QNLSNEVPNISEEVCTTQKEIINYNTQMK 311
               LL  GF N   R          Y          VP I  E           +  + 
Sbjct: 291 EVKKLLEWGFRNFESRALFASDATIGYARVFGGEKRYVPLIPAEPVRVMVRKNGSDRLIA 350

Query: 312 EAKDKESHFIDFEKITLLK 330
                       +    + 
Sbjct: 351 RIVYTGPVAAPVDAGRRIG 369


>gi|322833272|ref|YP_004213299.1| Beta-lactamase [Rahnella sp. Y9602]
 gi|321168473|gb|ADW74172.1| Beta-lactamase [Rahnella sp. Y9602]
          Length = 403

 Score =  194 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/325 (25%), Positives = 138/325 (42%), Gaps = 12/325 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +A       + L+D N+G ++ E+ PD   +PASL+K+M +YVV   +K  K      
Sbjct: 32  APVAPQINAKSWVLMDYNSGKILTESNPDARLDPASLSKIMVSYVVGQAIKSGKIKSDDL 91

Query: 80  ITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           +++  +A                K G  + +    K ++++S ND ++A+A+ +  ++  
Sbjct: 92  VSVGNDAWATGNPVLRGSSLMFLKPGDRVPVSELNKGIVIQSGNDASIALADFVAGSQDS 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  ++ L L  THF   HG+   G YT+A DMA+LS  +  D P      + K  
Sbjct: 152 FVNLMNRYAEQLKLQNTHFKTVHGLDADGQYTSATDMALLSQALIRDTPDEYALHKEKEF 211

Query: 194 EIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRNT 251
                K  N N     + L  DG+KTG+T  +G+N+V+SA       LIAV++GA     
Sbjct: 212 TFNHIKQINRNRLLWSSNLNVDGIKTGYTSGAGYNLVSSASDSTGMRLIAVVMGAPSDRI 271

Query: 252 RNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R   S SLL+ GF        I        +  +          ++E    T  +    N
Sbjct: 272 RFNESESLLTWGFRFYETLTPIKAGDAFTSQRVWFGEEKMVPLGVAENASLTMPKGQLKN 331

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            +               K  ++   
Sbjct: 332 LKASFNLTSPQLEAPLAKNQVVGTV 356


>gi|126736702|ref|ZP_01752441.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. CCS2]
 gi|126713817|gb|EBA10689.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. CCS2]
          Length = 382

 Score =  194 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 8/330 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
                P  + A         + D  TG V+     D P  PAS++KLMT Y+ F  + + 
Sbjct: 3   SLAFAPGWAAAFETNATAAYIYDQTTGTVLLSKNADTPLPPASMSKLMTIYMAFEAVADG 62

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT-- 130
           +  +   + +S +A+ +  S+        +++++ L+ +IV S ND +V +AE+L     
Sbjct: 63  RLDINEELAVSSHAASFGGSSMFLDTTDRVSVEDLLRGVIVVSGNDASVVLAEALSPDGT 122

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E  F + M + ++ +G+  + F+N+ G    GH  +  D+ IL+ R+ TDFP +   F  
Sbjct: 123 ESGFARMMTDRARQMGMMNSTFVNSSGWPAAGHRMSMEDLGILANRLITDFPTFYPLFAE 182

Query: 191 KGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                         N N  +   +GADG+KTG T  +GF +V SA Q D+ +I VI G  
Sbjct: 183 TEFPFDGRVPSNSRNRNPVLSMGIGADGLKTGHTEEAGFGLVGSAKQDDRRIIFVITGLD 242

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS---EEVCTTQKEII 304
            R  R++ SA +++  F     ++      +         E+P I     +  +    ++
Sbjct: 243 SRQERSEESAKIINWAFRQFAQKEVAEAGTRIASADVWMGELPTIGLTVADDFSLLVPVL 302

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           N      E                L   + 
Sbjct: 303 NQGDIEAEVVYDGPIEAPITAGQQLGELVI 332


>gi|251796348|ref|YP_003011079.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. JDR-2]
 gi|247543974|gb|ACT00993.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. JDR-2]
          Length = 405

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 145/369 (39%), Gaps = 35/369 (9%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETN------------------------KLPYYTL 33
           M++    L I+  A      P  + A                                 L
Sbjct: 1   MKKVCTKLFILFAAFALTAMPAAANANAVISAKEPVPGAQGQQQQTASLDLAPSARSAVL 60

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D ++G VI E   +    PAS+TK+MT  ++   L + K  LT  +  S+ A+    S 
Sbjct: 61  MDADSGTVIYEKDSNVKLPPASITKVMTMLLIMEALDDGKIKLTDKVPTSEYAASMGGSQ 120

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G  MT+D  LK + + S ND +VA+AE L  +E++FV  MN  ++ LGL  THF 
Sbjct: 121 IFLEPGEEMTVDEMLKGIAMASGNDASVAMAEKLAGSEQQFVVMMNEKAQQLGLQNTHFA 180

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL----EIKGKKYPNTNWAVGT 209
           N +G+    HYT+A D+A++S  +        +    +        K     NTN  V  
Sbjct: 181 NCNGLPAADHYTSAHDIAVMSRELLKHSEITKYTGSYQDYLRKTSEKPFWLVNTNKLVRF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           + GADG+KTGFT  + F + A+A + +  +IAV++G  +  TRN   + +L   F   T 
Sbjct: 241 YSGADGLKTGFTNEAKFCLTATAKRDNLRVIAVVMGEPNTKTRNAEVSQMLDFTFAQYTT 300

Query: 270 RKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                           +  +               K+         E +  +        
Sbjct: 301 HPIFKEGDTMGTIKVEKGAVREIPLVAKHPYSILLKKGAATQDIRYELQIDQPLKAPVAI 360

Query: 326 ITLLKNKIT 334
              +   + 
Sbjct: 361 GQSIGKLVV 369


>gi|297180929|gb|ADI17133.1| d-alanyl-d-alanine carboxypeptidase [uncultured gamma
           proteobacterium HF0070_03O15]
          Length = 370

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +  N+   +       +  Y L + NT  V+A    D P  PASLTKLMT+YVV  ++KE
Sbjct: 2   LSINLSAAIPNPPDLGVGSYILYEPNTKKVLASFNADAPVEPASLTKLMTSYVVADYIKE 61

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               LT    IS NA + P S    ++ + + +   +K +I++S ND +VA+AE +  +E
Sbjct: 62  DFIDLTDTPKISINAWKTPGSRMFIRESTKVPVSELIKGMIIQSGNDASVALAEHVAGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + F   MN  ++ LG+  T F NA G+    + T+A D+A+L+  +  +FP +  ++  K
Sbjct: 122 ENFSYLMNEYARELGMENTSFNNASGLPDPLNVTSANDLAVLTGELIKNFPDHYRHYSQK 181

Query: 192 GLEIKGKKYPNTNWAVGTFL---GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                G    N N  +         DG+KTG+T ++G+ +V SA++    L+AV+LG+ D
Sbjct: 182 SFTYAGIAQKNRNQLLWRDNTSITFDGVKTGYTESAGYCLVGSAVKDGMRLVAVVLGSED 241

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEII 304
              R    ++L+  GF      K                   N    ISE+V  T +   
Sbjct: 242 DK-RFNDVSNLMVYGFRYFKTEKLFEKNEPLKSVQVIAGKKDNVNVGISEDVVLTLQRDQ 300

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNK 332
             + + +   D  +       +      
Sbjct: 301 RDSLRYEVTADT-TVLAPVNSMDKAGTV 327


>gi|255019743|ref|ZP_05291820.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
 gi|254970811|gb|EET28296.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
          Length = 388

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 3/308 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y L+D ++G +IA    +    PASLTKLMTAY+ +  +          + +S  A + 
Sbjct: 46  SYVLMDYDSGQIIAAKEENLHRAPASLTKLMTAYLTYQAMANGSLRPDETVNVSNTAWKT 105

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             S    + G  +T+D  L  L++ S ND AVA+AE++  ++  FV  MN+ ++ L L  
Sbjct: 106 GGSRMFIQPGLPVTVDQLLHGLLIDSGNDAAVALAETVGGSQAGFVTLMNDAARQLHLDN 165

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           TH+ N +G+     YTTA D+A LS  +   +PQ +   + K          + N  +  
Sbjct: 166 THYSNVNGLPDSNLYTTALDVAKLSRALIQQYPQVIAITRQKSYTYNKITQRSWNPVLFR 225

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTG T  SG+ I A+A +  + LIAV+LG    +       SLL+ G+    D
Sbjct: 226 DPSVDGLKTGLTDESGYCIDATAQRNGRRLIAVVLGGPSWSGSTNAVESLLNYGYRFFED 285

Query: 270 RKKINYIIKDFYQQNLSNE---VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
            +    + +    ++ +     VP                +   +    K +  +   K 
Sbjct: 286 HELYKPMTEVGEIRDPNLSPMRVPVAVATEVIVTVPRGRLDELDRRIVWKPAGSLPIAKG 345

Query: 327 TLLKNKIT 334
            ++   I 
Sbjct: 346 GVVGEMIL 353


>gi|225677145|ref|ZP_03788144.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590812|gb|EEH12040.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 368

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 5/324 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
            F   S     K     +LD  +   I ++  D    P+S++KLMT Y+ F +LK     
Sbjct: 15  PFSSYSYQFRTKAKQAVVLDLASDSFIFDHNSDEKMAPSSMSKLMTLYIAFDYLKAGIIH 74

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +     +S+ A E   S+   K+G ++T+   L+ + + S ND  + +AE +  +E+ FV
Sbjct: 75  MEDKFRVSRKAWERRGSSMFLKEGQSVTVRELLEGITIVSGNDACITLAEGIAGSEENFV 134

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++NL L+ +HF+N+ G     H+  A+D+ +L+ RI TDFP+Y   F  + L  
Sbjct: 135 AEMNEVAQNLNLNDSHFVNSSGWPDEDHFMNAKDLVMLAKRIFTDFPEYYDLFSEQYLTY 194

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 N N  +   +G DG+KTG+T A G+ IVASA + D+ + AV+ G      R + 
Sbjct: 195 NEIVQKNKNLLLFHDIGVDGLKTGYTNAGGYGIVASAKRNDRRIFAVVNGLNTEKERIEE 254

Query: 256 SASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           +  L+     +   +K           +            ++ +V  T    ++   +++
Sbjct: 255 AKRLIQYSLNHFNTKKIFAKDSVVEEVNVLYGKDKKVPITVANDVTITYNRKLHDQIKVR 314

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
             + K+      +K   +     +
Sbjct: 315 I-EYKDMIPAPIKKGQEVGEVFVE 337


>gi|223986124|ref|ZP_03636147.1| hypothetical protein HOLDEFILI_03455 [Holdemania filiformis DSM
           12042]
 gi|223961929|gb|EEF66418.1| hypothetical protein HOLDEFILI_03455 [Holdemania filiformis DSM
           12042]
          Length = 383

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 86/349 (24%), Positives = 144/349 (41%), Gaps = 17/349 (4%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++   +VI     L ++    S             L+D  TG ++ E        PAS+
Sbjct: 1   MKKLASIVIALSLFLVSVHATTSQGVDLTPSAKAAILIDYETGQILYEKNSSAKLYPASM 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+M+  +V   +   K    T +T S +AS    S    + G  MT+++  K   V SA
Sbjct: 61  TKMMSLLLVVEAIHNGKLSWDTEVTASAHASSMGGSQIFLETGEVMTVEDLYKASTVASA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND  VA+AE +  +E+ F   MN  ++ LGL  THF+NA G+    HY+ A+DMA +   
Sbjct: 121 NDAIVALAEKVGGSEENFAAMMNEKAEQLGLEQTHFVNATGLHDDNHYSCAKDMAAIGRA 180

Query: 177 IKTDFPQY------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           +  +           +   I+          NTN  + T+ G DG+KTG+T  S + I  
Sbjct: 181 LIQEGQDDILRFTSTYDDYIRADTENKFWLVNTNKLIRTYQGMDGLKTGYTTQSMYCITV 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           +A +    LI V +G   R+ RN  +++LL  GF     + ++         +  + +  
Sbjct: 241 TAKRDGLRLIGVAMGEPTRDVRNSEASALLDYGFSTYGYQIEMEKGTPVTTIKVDNGKPD 300

Query: 291 NISEEVC-----TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +             K   +     +   DK+      +    +   I 
Sbjct: 301 EVRLVTKEAIGHIVAKGAQSALINTEIVLDKK--KAPIQAGETVGRVIL 347


>gi|83943052|ref|ZP_00955512.1| D-alanyl-D-alanine carboxypeptidase [Sulfitobacter sp. EE-36]
 gi|83954241|ref|ZP_00962961.1| D-alanyl-D-alanine carboxypeptidase [Sulfitobacter sp. NAS-14.1]
 gi|83841278|gb|EAP80448.1| D-alanyl-D-alanine carboxypeptidase [Sulfitobacter sp. NAS-14.1]
 gi|83846060|gb|EAP83937.1| D-alanyl-D-alanine carboxypeptidase [Sulfitobacter sp. EE-36]
          Length = 389

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 14/343 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           I A  + + +    + A   +     ++D  TG V+     D P  PAS++KLMT Y+ F
Sbjct: 4   IFAATIATLLLALPAQAFETQARAAYVVDQTTGTVLLTKNADEPLPPASMSKLMTLYMAF 63

Query: 67  SFLKEKK----AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
             ++  K      LT  + +S++A  Y  S         + +++ L+ +IV S ND    
Sbjct: 64  EAIERGKSNGGLDLTEELPVSQHAMSYGGSTMFLDTTDRVKVEDLLRGIIVLSGNDACAV 123

Query: 123 IAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           IAE+L     E  F + M   ++ +G++ + F N++G    GH  + RD+ +L+ R+  D
Sbjct: 124 IAEALSPDGSEAGFARLMTQRAQQMGMTNSTFANSNGWPAAGHRMSLRDLGLLATRLIED 183

Query: 181 FPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           +PQY   F  +         +   N N  +G  +GADG+KTG T  +G+ +V SA QGD+
Sbjct: 184 YPQYYPMFSQREFLFDGRAPQNKTNRNPLLGLGIGADGLKTGHTEEAGYGLVGSAKQGDR 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNIS 293
            ++ V+ G      R + S S+++  F   + R                         + 
Sbjct: 244 RVVFVLSGLESAAARAQESESIVNWAFRQFSQRSMGKAGTMIAEAPVALGAQGAVGLELE 303

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            ++          +   +             K   +   +  +
Sbjct: 304 SDLSVLVPVSGGSDVSAEVV-YTGPLRAPITKGQNIGELVLTR 345


>gi|114762661|ref|ZP_01442095.1| D-alanyl-D-alanine carboxypeptidase [Pelagibaca bermudensis
           HTCC2601]
 gi|114544571|gb|EAU47577.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius sp. HTCC2601]
          Length = 391

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 80/325 (24%), Positives = 135/325 (41%), Gaps = 8/325 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             + A         +LD  TG V+     D    PAS++KLMT Y+ F  +++ +  L  
Sbjct: 22  TQAGAFDTSARAAFVLDYTTGTVLMAKNADEALPPASMSKLMTLYMAFEAVRDGRLQLDE 81

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFVQ 136
            + +S++A  Y  S         + +++ L+ +IV S ND    IAE+L     E  F +
Sbjct: 82  RLPVSQHAMSYGGSTMFLNTTDRVAVEDLLRGIIVLSGNDACAVIAEALSPNGTEAGFAE 141

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M   ++ LG++ + F NA G     H  + RD+ +L+ RI  DFP++   F  +  E  
Sbjct: 142 LMTRRAQQLGMTNSTFENASGWPAPNHRMSVRDLTLLATRIIEDFPEFYPIFAERRFEFD 201

Query: 197 ---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N N  +   +GADG+KTG T  +G+ +V SA Q  + +I  I G      R 
Sbjct: 202 GRAPSNVNNRNPLLRLDIGADGLKTGHTQEAGYGLVGSAEQDGRRVIFTISGLDSERARA 261

Query: 254 KVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           + + S+++  F    +R  +       +        + V  ++EE  T    +       
Sbjct: 262 EEAESIVNWAFRQFAERTLVEQGTAVAQAEVWLGAEDSVGLVAEEDVTLLVPVTPGTMLE 321

Query: 311 KEAKDKESHFIDFEKITLLKNKITK 335
            E                L   I +
Sbjct: 322 AEVVYTGPLKAPISAGQQLAELIIR 346


>gi|260427958|ref|ZP_05781937.1| serine-type D-Ala-D-Ala carboxypeptidase [Citreicella sp. SE45]
 gi|260422450|gb|EEX15701.1| serine-type D-Ala-D-Ala carboxypeptidase [Citreicella sp. SE45]
          Length = 519

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 96/279 (34%), Positives = 151/279 (54%), Gaps = 4/279 (1%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            I   ++    P  +IA         ++D  +G V+     D P +PASLTK+MT Y+ F
Sbjct: 16  FILAIVMLAAMPLSAIAAPF---AAMVMDARSGEVLHSENADTPLHPASLTKMMTLYIAF 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             ++  +  + + +T+S+NA+  PPS    ++G  + L   ++   VKSAND A AI E+
Sbjct: 73  EAVEHGEITMDSVVTVSRNAASEPPSKLGLREGQKIKLRYLVRAAAVKSANDAATAIGEA 132

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E  F + MN T+K LG++ + F NA+G+ + GH +TARDM+IL   +  D+PQY +
Sbjct: 133 IAGSEAAFARRMNRTAKALGMTRSTFKNANGLTESGHMSTARDMSILGRHMVYDYPQYYN 192

Query: 187 YFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            F         ++  NTN    G++ GADG+KTG+T A+GFN+VASA +G + +I  + G
Sbjct: 193 LFSRISTSAGVREVANTNRRFLGSYKGADGIKTGYTRAAGFNLVASAERGQERVITTVFG 252

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
                 RN   A L+ +GF     R  +       Y  N
Sbjct: 253 GASTAARNAKVAQLMDLGFKRAKTRVALRKPGLPPYLGN 291


>gi|15603792|ref|NP_246866.1| DacA [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12722361|gb|AAK04011.1| DacA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 394

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 91/339 (26%), Positives = 150/339 (44%), Gaps = 9/339 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + IA ++L+    +           + L+D N+G VIA   PD    PASLTK+MT+YVV
Sbjct: 17  LCIAPSLLAQDIDYGIAVPQLNAQTFILMDYNSGAVIAALNPDQRQYPASLTKMMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              LK+ K      +TI ++A        S         +++ +  + +I+ S ND +VA
Sbjct: 77  GDALKQGKINNADRVTIGESAWGKNFPGSSKMFLNLNQQVSVSDLNRGVIIVSGNDASVA 136

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           IAE +  +   FV  MN  ++  GL  THF   HG+ +   Y++ARDMAI+   +  D P
Sbjct: 137 IAEHVAGSVPAFVDAMNKYAQQFGLKNTHFTTVHGLDEDNQYSSARDMAIIGAHLIRDLP 196

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSLI 240
           +    +  K       K  N N       +  DG+KTG T  +G+N+VASA    +  LI
Sbjct: 197 EEYKIYAEKDFTFNKIKQNNRNGLLWDKSIQVDGIKTGHTDKAGYNLVASATNANNMRLI 256

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEV 296
           +V++G      R   S  LL  GF N    K +        +  Y  ++      + ++ 
Sbjct: 257 SVVMGVPTIKGREVESKKLLQWGFANFDTFKTLEAGKAISEQSVYYGDMGKVSLGVLQDG 316

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             T  +      + +   +K+       K  ++   + +
Sbjct: 317 FITIPKGKQTELKARYELNKKYLQAPLAKGEVVGQVVYQ 355


>gi|258516321|ref|YP_003192543.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257780026|gb|ACV63920.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 373

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 89/337 (26%), Positives = 145/337 (43%), Gaps = 15/337 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M + L    + +     P  +  +         L+D  +G V+ +        PAS TK+
Sbjct: 5   MLRVLPFFLLLLNVYCLPVQAAYSPPVAAESAVLMDVGSGQVLYQKNAFQRRPPASTTKI 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +TA +           L   +TISK A+    S+   + G  +TL+  +   ++KS ND 
Sbjct: 65  LTALLALE-----GGDLGQVVTISKTAASTGESSIYLQAGENLTLEELIYGALLKSGNDS 119

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VAIAE +  TE  FVQ MN  +K +G   +HF+N +G+   GHY+TA D+A L+     
Sbjct: 120 CVAIAEQIAGTEANFVQLMNEKAKQMGAMDSHFVNCNGLPAEGHYSTAYDLAKLTCYALQ 179

Query: 180 DFPQYMHYFQIKGLEIKGKKYP---NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           +          + +           NTN  + T+  ADG+KTG T A+G  +VASA + +
Sbjct: 180 NPVFNTVVSTREKVIRGPGWQRHLQNTNQLLDTYTFADGVKTGTTNAAGPCLVASATRDN 239

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNIS 293
           + L++V+L +     R   S SLL  GF N ++ K +               S  V  +S
Sbjct: 240 RRLVSVVLHS---ANRYGDSKSLLEYGFNNFSNNKVLTAGQVIGDIPVCDGFSPAVQAVS 296

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +   T        +   K+    +      +K   + 
Sbjct: 297 KGDLTVVIPNGRTDLIEKKIYLVDGLTAPVKKEQKIG 333


>gi|295696433|ref|YP_003589671.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus tusciae DSM
           2912]
 gi|295412035|gb|ADG06527.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus tusciae DSM
           2912]
          Length = 403

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 81/348 (23%), Positives = 142/348 (40%), Gaps = 20/348 (5%)

Query: 1   MR---QFLVIIAMAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPD 48
           MR   +++ I+A+ +        S+              +    L+D  TG V+    PD
Sbjct: 1   MRIAVRWMTILALVIWVWSGSRGSVPARADQADGPPDLAVRSAVLMDMKTGQVLYAKNPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
            P  PAS+TK++TA V     +     L   IT S+ A+    +     +G   +L+  L
Sbjct: 61  EPHYPASITKILTAIVALERGQ-----LNDRITTSRLATLQDGNRIYLVEGEEHSLEELL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             +++ S ND AVAIAE    +   F   MN T+K +G   THF N +G+    H TTA 
Sbjct: 116 YGMMLNSGNDAAVAIAEHYGGSVAGFAAMMNATAKEIGALHTHFTNPNGLHDPNHVTTAY 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASG 225
           DM ++      +                 +      N N  + T+ GA G+KTG+T  + 
Sbjct: 176 DMCLIGRYAMQNPIFRQIVATKTYPWHGKEWESELVNINRMLWTYPGATGIKTGYTDQAQ 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
             +V SA +G++SLIA ++    +    + ++ LL  GF +   ++  +        Q  
Sbjct: 236 QTMVVSATRGNESLIATLMDIPGQEAMREEASKLLDWGFQHFATQRLASAGEAAETVQLP 295

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            ++  N                 Q+    + +   +  +K  ++   +
Sbjct: 296 GHQTANALLSRSVWYTFAQGTAPQVTRNIELDKPKLPLQKGAVVGQAV 343


>gi|42520006|ref|NP_965921.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|99035928|ref|ZP_01314975.1| hypothetical protein Wendoof_01000183 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|42409743|gb|AAS13855.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 368

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 5/324 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
            F   S     K     +LD  +   I ++  D    P+S++KLMT Y+ F +LK     
Sbjct: 15  PFSSYSYQFRTKAKQAVVLDLASDSFIFDHNSDEKMAPSSMSKLMTLYIAFDYLKAGIIH 74

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +     +S+ A E   S+   K+G ++T+   L+ + + S ND  + +AE +  +E+ FV
Sbjct: 75  MEDKFRVSRKAWERRGSSMFLKEGQSVTVRELLEGITIVSGNDACITLAEGIAGSEENFV 134

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++NL L+ +HF+N+ G     H+  A+D+ +L+ RI TDFP+Y   F  + L  
Sbjct: 135 AEMNEVAQNLNLNDSHFVNSSGWPDEDHFMNAKDLVMLAKRIFTDFPEYYDLFSEQYLTY 194

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 N N  +   +G DG+KTG+T A G+ IVASA + D+ + AV+ G      R + 
Sbjct: 195 NEIVQKNKNLLLFHDIGVDGLKTGYTNAGGYGIVASAKRNDRRIFAVVNGLNTEKERIEE 254

Query: 256 SASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           +  L+     +   +K           +            ++ +V  T    ++   +++
Sbjct: 255 AKRLIQYSLNHFNTKKIFVKDSVVEEVNVLYGKDRKVPITVANDVTITYNRKLHDQIKVR 314

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
             + K+      +K   +     +
Sbjct: 315 I-EYKDMIPAPIKKGQEVGKVFVE 337


>gi|260598500|ref|YP_003211071.1| D-alanyl-D-alanine carboxypeptidase [Cronobacter turicensis z3032]
 gi|260217677|emb|CBA32019.1| D-alanyl-D-alanine carboxypeptidase dacD [Cronobacter turicensis
           z3032]
          Length = 412

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 92/340 (27%), Positives = 140/340 (41%), Gaps = 11/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++    A        +          Y L+D  TG ++A N      NPASLTKLMT Y
Sbjct: 36  IMLAGITAQAHAAALSMPQPPAIMAGSYVLMDYTTGQILAANNEHQQRNPASLTKLMTGY 95

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSAN 117
           VV   +   +      +T+ K+A                K G  +T+ +  + LIV S N
Sbjct: 96  VVDRAIDSHRITPDDVVTVGKDAWAKDNPVFEGSSLMFLKAGDRVTVRDLSRGLIVDSGN 155

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VA+A+ +   + +FV  MN+  + LGL  THF   HG+   G +++A D+A+LS  I
Sbjct: 156 DACVALADYVAGGQPQFVSMMNDYVQKLGLKDTHFETVHGLDAPGQHSSAYDLAVLSRAI 215

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               P + H +  K L   G    N N       L  DG+KTG T  +GFN++AS++ G 
Sbjct: 216 IHGEPAFYHMYSEKSLTWNGITQQNRNGLLWDKTLNVDGLKTGHTSGAGFNLIASSVDGK 275

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNI 292
           + LIAVI+GA     R   +  LL  G       + +    K      +           
Sbjct: 276 RRLIAVIMGADSPKGREDQARKLLHWGQQTFDTVEILQKGKKVGTERVWYGKNEQVAVGT 335

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +   T  +    N + K   D+E      +    +   
Sbjct: 336 DRDFWLTLPKAQLANVKAKYLLDRERLDAPLDANEKVGEI 375


>gi|154498460|ref|ZP_02036838.1| hypothetical protein BACCAP_02449 [Bacteroides capillosus ATCC
           29799]
 gi|150272528|gb|EDM99713.1| hypothetical protein BACCAP_02449 [Bacteroides capillosus ATCC
           29799]
          Length = 454

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 145/372 (38%), Gaps = 38/372 (10%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDHP 50
           M++   F +++ +A++  +    S A                L+DT  G ++ E+     
Sbjct: 1   MKKNRVFSLVLTLALICAVLAPFSTAAANSVDDYVVNARSAILVDTTYGEILYEHNSHER 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS---KNASEYPPSNSTFKKGSTMTLDNA 107
             PAS+TK+MT  +    +   +  L   IT+S    +      S    K G  +TL + 
Sbjct: 61  TYPASITKVMTGLLTIEAIDRGELSLDQQITVSSNVNDGMMSGASTQNLKSGEVLTLKDV 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L   ++ SAN+    +AE++  +   FV+ MN  +  LG   THFMN HG+    HYTTA
Sbjct: 121 LACALIPSANEACNVLAETVAGSIDAFVELMNQRAAELGCEDTHFMNPHGLHDENHYTTA 180

Query: 168 RDMAILSWRIKTDFPQY------------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
            D+ +                         +  + +          +  +   T+    G
Sbjct: 181 YDIYLFCNEAMKHDIFRELVTSMNYTVPATNMSEERTFWDTNALITSWKYKGYTYEYCTG 240

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGAL--------DRNTRNKVSASLLSMGFYNK 267
           +KTG+T  +G+ + ++A +GD+SLIAV+ G          +  T    S  LL  GF N 
Sbjct: 241 IKTGYTPEAGYCLASAATKGDRSLIAVVTGCERTPGATGSEGYTHFSESKKLLEWGFSNF 300

Query: 268 TDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNT-QMKEAKDKESHFID 322
           + +  ++                + V   +  +       ++    + K  +  ++    
Sbjct: 301 SYQSIMSSSKPQLSIPVTLSETDHVVAEPNGTLSAVLPNDVSAEDFEQKVERYYDTLEAP 360

Query: 323 FEKITLLKNKIT 334
            EK T+L     
Sbjct: 361 VEKGTVLGKVTL 372


>gi|221069456|ref|ZP_03545561.1| Serine-type D-Ala-D-Ala carboxypeptidase [Comamonas testosteroni
           KF-1]
 gi|220714479|gb|EED69847.1| Serine-type D-Ala-D-Ala carboxypeptidase [Comamonas testosteroni
           KF-1]
          Length = 390

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 15/329 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +        Y L+D   G V+     D P   ASLTKLM+AYVVF  L+ KK  L  
Sbjct: 27  AAPVPPEIAARNYLLVDVTAGQVLGAKDIDAPVEQASLTKLMSAYVVFDALRAKKITLEQ 86

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A + P S         + +++ L  +I++S ND  +A+AE++  T + FV+ M
Sbjct: 87  RMPVSERAWKMPGSRMFIDPKMQVPVNDLLSGMIIQSGNDATMALAEAVGGTAENFVKMM 146

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N+ +K LG+  T + N  G+ + GH TTARD++IL+ R+  DFP+YMHY+  K     G 
Sbjct: 147 NDQAKALGMKNTSYKNPEGLTEPGHLTTARDLSILAQRLMHDFPEYMHYYSTKQYSYPGT 206

Query: 199 KY---PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----DQSLIAVILGALDRN 250
                 N N  +      DG+KTG T A+G+ +VA+A +       + L++++LG     
Sbjct: 207 PASNGSNRNALLFRDPTVDGLKTGHTNAAGYCLVATAKRDLPNVGQRRLLSIVLGTASEK 266

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEE----VCTTQKEI 303
            R   S  LL+ G+      K  +           +  +N V     +    V       
Sbjct: 267 ARANESQKLLNWGYTAFDAVKLFDADQPVATPAVWKGAANAVKIGKADGAVVVTVPSGTG 326

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T++       +     + + +LK K
Sbjct: 327 GKLTTEVVRQDPLIAPIAKGQSMGVLKVK 355


>gi|254293994|ref|YP_003060017.1| serine-type D-Ala-D-Ala carboxypeptidase [Hirschia baltica ATCC
           49814]
 gi|254042525|gb|ACT59320.1| Serine-type D-Ala-D-Ala carboxypeptidase [Hirschia baltica ATCC
           49814]
          Length = 380

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 79/345 (22%), Positives = 150/345 (43%), Gaps = 11/345 (3%)

Query: 1   MRQFLVII---AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           MR F   I   ++ + S   P  + A      Y  ++D +TG  +     D P+ PAS+T
Sbjct: 1   MRIFSAFIVSTSLLLGSVYTPAYADALNTSADYAYIMDADTGMALYSKDGDTPFIPASMT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLI 112
           K+MTAY+VF  +++ +  L     +S+ A          S    + GS +++ + L+ +I
Sbjct: 61  KIMTAYIVFERIRDGRLTLEDEFVVSETAWREGGAASGGSTMFLELGSKVSVRDLLRGVI 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND  + IAE++  +++ F + M   ++ LGL +  F N  G+    H  +A D+A 
Sbjct: 121 IQSGNDACIVIAEAISGSQEAFAEEMTRRARELGLDSATFENPTGLYSDNHRISAADLAQ 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L++    DFP++   +  K     G + PN N  +G   GADG+KTG    SG+ +V SA
Sbjct: 181 LAYLTIKDFPEFYALYSEKEFTWNGIRQPNRNPLLGEVQGADGLKTGHLEISGYGLVGSA 240

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           ++  +  I V+ G      R   +  ++   F +    + +              +   +
Sbjct: 241 VRDGKRRIIVLNGLDSIAERASEARRVMRSAFVDFKVVEVVQPDQIVGEADVFLGKQKTV 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLKNKIT 334
             +     K  ++ ++      +            +  ++   I 
Sbjct: 301 ELKAIELMKAALHADSIRDIKVEVVYNGPLKAPLSEGDVVGEIIV 345


>gi|120609035|ref|YP_968713.1| penicillin-binding protein 6 [Acidovorax citrulli AAC00-1]
 gi|120587499|gb|ABM30939.1| penicillin-binding protein 6 [Acidovorax citrulli AAC00-1]
          Length = 393

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 93/332 (28%), Positives = 153/332 (46%), Gaps = 14/332 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                       Y LLD   G V+A    D P   ASLTKLMT Y+VF  L+ KK  L  
Sbjct: 31  QAPQPPEIAARNYLLLDVTAGQVLAAKDIDAPVEQASLTKLMTGYLVFDALRAKKITLEQ 90

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A + P S         + +++ +K +IV+S ND  +A+AE +  T + FV+ M
Sbjct: 91  RLPVSERAWKMPGSRMFIDPKMQVPVEDLIKGMIVQSGNDATMALAEGVGGTAENFVKLM 150

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N+ ++ LG+  T + N  G+ + GH TTARD+++L+ R+  DFP+YMHY+  K       
Sbjct: 151 NDQARALGMKNTAYKNPEGLTEPGHTTTARDLSVLATRLMKDFPEYMHYYSTKHYAYPGT 210

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----DQSLIAVILGALDRN 250
                 N N  +      DG+KTG T A+G+ +VA++ +       + L++++LGA   +
Sbjct: 211 PPSNGTNRNALLFRDPTVDGLKTGHTAAAGYCLVATSKRDFPNIGQRRLLSIVLGAASES 270

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEE---VCTTQKEII 304
            R   S  LL+ G+      K  +           + + N +     +   V        
Sbjct: 271 ARANESQKLLNWGYTAYDAVKLFDAGQPAATPALWKGVQNTIKIGRPDPIVVTVPSGSAG 330

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              TQ+       +     + I  LK  + ++
Sbjct: 331 KITTQVVRQDPLVAPLTKGQSIGTLKVSLGEQ 362


>gi|281500691|pdb|3A3J|A Chain A, Crystal Structures Of Penicillin Binding Protein 5 From
           Haemophilus Influenzae
          Length = 344

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 9/323 (2%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                     Y L+D N+G ++    PD    PASLTK+MT+YVV   LK+ K   T  +
Sbjct: 2   VTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMV 61

Query: 81  TISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           TI ++A        S       + +++ +  + +IV S ND  VA+AE +      FV+ 
Sbjct: 62  TIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVET 121

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D P+    +  K      
Sbjct: 122 MNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKDFTFNK 181

Query: 198 KKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTRNKV 255
            K PN N       +  DGMKTG T  +G+N+VASA    +  LI+V++G      R   
Sbjct: 182 IKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVE 241

Query: 256 SASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           S  LL  GF N    K +    +      Y  + ++       +   T  +      + +
Sbjct: 242 SKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFMDHFITIPKGKQSEVKAR 301

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
                ++      K  ++   + 
Sbjct: 302 YELADKNLQAPLAKGQVIGKVVY 324


>gi|154497956|ref|ZP_02036334.1| hypothetical protein BACCAP_01936 [Bacteroides capillosus ATCC
           29799]
 gi|150272946|gb|EDN00103.1| hypothetical protein BACCAP_01936 [Bacteroides capillosus ATCC
           29799]
          Length = 392

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 85/339 (25%), Positives = 139/339 (41%), Gaps = 13/339 (3%)

Query: 1   MRQFLVIIAMAMLSN----IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++    +  A+L      +    +           L+D  +G V+ E   D     AS+
Sbjct: 1   MKRVFAAMTAAVLCLTWLPLSAGAAGEPGVSASCAILVDAESGRVLMEKNADEERAIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TKLMTA V           L   +TI K  +    S+   ++G  +TL   L  L++ S 
Sbjct: 61  TKLMTALVAVESTS----DLDRTVTIQKEWTLAEGSSMYLREGEELTLRELLYGLLLVSG 116

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+AIA         FV+ MN  ++ LG+  THF+N +G+   GHY+TA DMA L   
Sbjct: 117 NDAALAIAGFCAGDTDTFVEWMNLRAQELGMEHTHFVNPNGLPAEGHYSTAADMAKL-AI 175

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           +  + P        K + + G+   N N  +  + G  GMKTG+T A+G  +V+ A +  
Sbjct: 176 VVMEQPDLAEIVGTKSVTMAGRTMTNHNKLLWRYEGCVGMKTGYTDAAGRTLVSCAERDG 235

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
           Q LIAV L A +        A++   GF         +            + V  +  +V
Sbjct: 236 QRLIAVTLNAPND---WADHAAMFDYGFSQWPSILLASAGRDFRTLPVTGSLVRFVPVQV 292

Query: 297 CTTQKEIINYNTQMKEAKDKESH-FIDFEKITLLKNKIT 334
               +  +  + ++    D         E+  +  +   
Sbjct: 293 ERDVRYPLAADERVTVKIDLPDQVEAPVEEGDIAGSLTY 331


>gi|148825690|ref|YP_001290443.1| hypothetical protein CGSHiEE_03165 [Haemophilus influenzae PittEE]
 gi|148715850|gb|ABQ98060.1| hypothetical protein CGSHiEE_03165 [Haemophilus influenzae PittEE]
          Length = 367

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 88/326 (26%), Positives = 139/326 (42%), Gaps = 9/326 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           F           Y L+D N+G ++    PD    PASLTK+MT+YVV   LK+ K   T 
Sbjct: 3   FGVTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTD 62

Query: 79  PITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
            +TI ++A        S       + +++ +  + +IV S ND  VA+AE +      FV
Sbjct: 63  MVTIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFV 122

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D P+    +  K    
Sbjct: 123 ETMNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKDFTF 182

Query: 196 KGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTRN 253
              K  N N       +  DGMKTG T  +G+N+VASA    +  LI+V++G      R 
Sbjct: 183 NKIKQANRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGRE 242

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             S  LL  GF N    K +    +      Y  + ++       +   T  +      +
Sbjct: 243 VESKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGALMDHFITIPKGKQSEVK 302

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
            +     ++      K  ++   + +
Sbjct: 303 ARYELADKNLQAPLAKGQVIGKVVYQ 328


>gi|298291753|ref|YP_003693692.1| serine-type D-Ala-D-Ala carboxypeptidase [Starkeya novella DSM 506]
 gi|296928264|gb|ADH89073.1| Serine-type D-Ala-D-Ala carboxypeptidase [Starkeya novella DSM 506]
          Length = 414

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 86/340 (25%), Positives = 132/340 (38%), Gaps = 11/340 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +R  L+   +      F   ++A        P   L+D  +G V+ E   D    P S+ 
Sbjct: 18  LRTVLLASFVLFCLAAFVLPALAQTQPEIAAPQAILMDFESGTVLFEKAADTQSAPGSIA 77

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLI 112
           KLM+  V+F  + E +    T   +S+ A     +            S++ + + L+  I
Sbjct: 78  KLMSLAVIFREITEGRLSPDTEFKVSEYAWRRGGAPSGGATMFAALNSSIKVSDLLRGAI 137

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND  + +AE +   E  F   MN  +K LGL+ + F N++G+      TTARDMA 
Sbjct: 138 IPSGNDATIILAEGISGNELGFSVKMNEEAKRLGLTGSSFHNSNGLSDPDQKTTARDMAK 197

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           ++  I  D+P     F          +  N N  +G  LGADG  TG+    GFN+V SA
Sbjct: 198 IATHIIRDYPDLYKIFSEPDFLWSKIRQSNRNPLLGMSLGADGFMTGYLKEGGFNLVGSA 257

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEV 289
           +Q +Q LI VILG      R + +  LL  GF +   R          +           
Sbjct: 258 VQNNQRLIVVILGGKSEKERAEDARKLLEWGFRSFESRLLFEPGQIVGEATLYGGERGGA 317

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           P                     + +         EK   L
Sbjct: 318 PLTGTGPIRVLVPRSGDERVTAKIRFDGPIRAPVEKGQQL 357


>gi|298368809|ref|ZP_06980127.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298282812|gb|EFI24299.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 450

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 18/331 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +         + + D  +  V+A N PD+   PASLTK+MTAY+ F  L++       
Sbjct: 79  SPAAVPQIAATAFIVKDLQSNQVLAANNPDNLIEPASLTKMMTAYLTFKALEDGTLKADE 138

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL----------- 127
            +T+S        S         +++ + LK +IV+S ND A+ +AE++           
Sbjct: 139 MLTVSDAGWHTEGSRMFLNPHVPVSVSDLLKGMIVQSGNDAAITLAEAIGGIGNDSEQTE 198

Query: 128 --CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
                 + FV  MN  +K LG++ T F N  G+    H +T  D+A+L+  +  D+P+Y 
Sbjct: 199 TPKPPLENFVAMMNMEAKRLGMNHTRFNNPTGLASERHLSTVSDLALLAAALIRDYPKYY 258

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             F +K     G + PN N  +      DG+KTG T ++G+N+ AS+ +  + +I +++G
Sbjct: 259 PIFSLKSFRYNGIEQPNRNLLLFRDSSVDGLKTGHTESAGYNLAASSNRNGRRIITIVVG 318

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQK 301
           A     R   S  LL+         K  +          Y+ + +      +++   T  
Sbjct: 319 AESTEARASESGKLLNWALQAFDTPKLYDAGEVISQVKVYKGSANAVKIGFADDTYITIP 378

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               +  +     ++       EK ++L   
Sbjct: 379 HGSGHRIRPVLETEQP-VLAPIEKGSILGKL 408


>gi|254995301|ref|ZP_05277491.1| hypothetical protein AmarM_05055 [Anaplasma marginale str.
           Mississippi]
          Length = 370

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 8/343 (2%)

Query: 1   MRQFLV-----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +R+FL+           L+   P  ++    K P+  + +  +  V+ E+  D    P+S
Sbjct: 2   IRRFLLSFLVPAFCCLALAPARPSYALKMHTKAPHAIVYELGSRTVLFEHDADVAAAPSS 61

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KLMT Y+VF  L      +    ++S++A +   S++  K G  + + + +    V S
Sbjct: 62  MSKLMTLYLVFQHLHAGLIKMDDTFSVSESAWKRGGSSAFLKVGQMVKVRDLIMGAAVSS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND  +A+AE +  ++++FV+ +N+ +K + L+ + F N  G    GH  + RD+  LS 
Sbjct: 122 GNDACIALAEGVSGSQEQFVEDINSLAKEMNLAHSSFTNVTGWPDEGHLMSVRDILTLSV 181

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           RI  DFP+Y H F  K     G    N N  +   +G DG+KTG T  +G+ I ASA + 
Sbjct: 182 RIFEDFPEYYHVFGEKQFTYNGVTQKNYNTLLNYNIGVDGIKTGHTEKAGYGIAASAQKD 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           ++ +  V+ G      R   +  LL   F     +          +          V   
Sbjct: 242 NRRVFVVVNGLKTETERAYETKRLLLYAFNRFETKVVFPAGSVVGEVKVWNGRKGTVQMH 301

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +            +       K +     +K   +     +
Sbjct: 302 VRDDVVISYPRDLSKSVKAFVSYKSTVAAPVKKGQEIGTLSVQ 344


>gi|210615757|ref|ZP_03290738.1| hypothetical protein CLONEX_02956 [Clostridium nexile DSM 1787]
 gi|210150093|gb|EEA81102.1| hypothetical protein CLONEX_02956 [Clostridium nexile DSM 1787]
          Length = 401

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 178/371 (47%), Gaps = 36/371 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---------------------TNKLPYYTLLDTNTG 39
           M++FL  + ++++  +    +++E                         P   L++ +TG
Sbjct: 1   MKRFL-ALMVSLVLCVTDVCAMSESEGILYEETKAGTEESAFGELEISTPSAVLMEVSTG 59

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
            VI E   D    PAS+TK+MT  ++F  L+++K  LT  +++S+ A+    S    + G
Sbjct: 60  KVIYEKAADEQLPPASVTKVMTLLLIFDALEDEKIKLTDIVSVSEYAASMGGSQVFLEPG 119

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T T+D  +K + V SAND  VA+AE +  +E++FV  MN  +K LG+  T+F+N +G+ 
Sbjct: 120 ETQTVDTMIKCIAVASANDACVAMAEHIWGSEEEFVAKMNARAKELGMEHTNFLNCNGLD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFL 211
             GH TTARD+A++S  + T +P+   Y  I    I              NTN  +  + 
Sbjct: 180 ADGHVTTARDIALMSRELITRYPKIHDYSTIWMENITHTTKKGTTEFGLANTNKLIRQYQ 239

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
            A G+KTG T  + F + A+A + D  LIAVI+ A D   R K + +LL+ GF   T  K
Sbjct: 240 YATGLKTGSTSKAKFCLSATAKKDDLELIAVIMAAPDPKARFKDATTLLNYGFGKCTKYK 299

Query: 272 KIN--YIIKDFYQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                 +     +  +  E+P   E     + TT   +     +++  ++K++     EK
Sbjct: 300 DTTPFELEPLKIRGGIEKEMPVAVETEFQYIDTTGANLSGIKRKIEIDQEKQAPVKKGEK 359

Query: 326 ITLLKNKITKK 336
           +  +   +  K
Sbjct: 360 VGTVTYLLNGK 370


>gi|323136276|ref|ZP_08071358.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocystis sp. ATCC
           49242]
 gi|322398350|gb|EFY00870.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocystis sp. ATCC
           49242]
          Length = 393

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 86/351 (24%), Positives = 137/351 (39%), Gaps = 18/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M  F  +IA   ++         L+ A    +P   L+D  T  V+ E   D    PAS 
Sbjct: 1   MLSFRYLIAAVFVAVSSLFSGSALAQAFQTSVPNAILIDAGTNTVLFEKGADDLVTPAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLL 111
            K++TA ++F  L E +  L    T+S+ A     +         K  S  T+++ L+ L
Sbjct: 61  VKILTAEMIFRELTEGRLKLGDVFTVSEYAWRNGGAPAGGSAMFLKVNSQATVEDLLRGL 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S ND A+ +AE +  +E+ FV  MN  +  LGL  + F N  G        T R++A
Sbjct: 121 LIDSGNDAALVLAEGVAGSEEAFVMRMNKRASELGLVKSRFGNPWGKASDDQKVTPREVA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L+  +   +P +  YF  K       +  N N  +   +GADG+KTG      F IV S
Sbjct: 181 KLALHVIRTYPDFYKYFGEKEFTWNNIRQQNRNPLLTMSIGADGLKTGNIEKGDFGIVGS 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD------FYQQNL 285
           A Q  + LI  + GA     R + +  LL  GF N  ++                  Q  
Sbjct: 241 ANQEGRRLIVAVYGAKTAKERAEEARKLLQWGFRNFEEKDLFKAGEPIGPAQIYGGVQGS 300

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            + V     +V   +        ++             E    +     K+
Sbjct: 301 VDLVSKTDVKVLLPRGGTEKLTGKIVYE---GPVIAPVEAGAGIGRLEVKR 348


>gi|313901752|ref|ZP_07835179.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467988|gb|EFR63475.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 405

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 81/323 (25%), Positives = 145/323 (44%), Gaps = 13/323 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L+D  TG  +     D P  PASL K+MT  +VF  L++ +  L   + +S+
Sbjct: 44  EIQARSALLVDATTGQELFAQKADEPIPPASLAKIMTLDLVFHALEQGQITLDQEVPVSE 103

Query: 85  NASEYP-------PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            A           PS    + G  + +++ ++ + + S ND +  +AE++  +E+ FVQ 
Sbjct: 104 AAWRLSVQAGLGGPSAMFLEVGERVRIEDLIRGVAIASGNDASTVLAEAVAGSEEAFVQR 163

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  LG+  + F N+HG+     + TARDMA L+  +  + P  + Y  +K  E K 
Sbjct: 164 MNQHAAELGMKDSVFSNSHGLPGGEQHVTARDMARLALHVLKEHPGILKYTSMKYFEWKD 223

Query: 198 KK-YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
               PN N  +      DG+KTG    +G+++VA+A +GD+ L++V++GA     R   S
Sbjct: 224 FAAQPNYNRLLFRDPRVDGLKTGHLSEAGYHLVATAREGDRRLVSVVMGAASDALRVGES 283

Query: 257 ASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
             LL  GF   T+ +         +   ++          +E+   T  +      + + 
Sbjct: 284 QRLLDYGFQQFTNTRVAFGENGRQVVPVFKGAQPQVTVQPAEDPVVTVPKTAAGEVRSRV 343

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
            + KE      E+   +     +
Sbjct: 344 -ELKEPLVAPLERGQRVGTLTIE 365


>gi|90411493|ref|ZP_01219504.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium profundum 3TCK]
 gi|90327706|gb|EAS44049.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium profundum 3TCK]
          Length = 400

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 159/349 (45%), Gaps = 17/349 (4%)

Query: 1   MRQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++F   I +   S         +   +          Y L+D  +G +IAEN P     
Sbjct: 1   MKRFFGRIVLGAFSVHMLIATKVLAVVIPEPPALNAKGYVLMDFQSGSIIAENNPRDALA 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALK 109
           PASLTKLMTAYVV   +  K+      +T+ +NA        S    K G  ++++N ++
Sbjct: 61  PASLTKLMTAYVVGQEINTKRLKWDDMVTVGENAWSLKFPDSSKMFIKPGDEISVENLMR 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            +I++S ND +VA+AE +  +E  FV  MN  +K L L  T F+NAHG+   G  T+  D
Sbjct: 121 GVIIQSGNDASVALAEYIAGSESGFVNLMNGWAKTLKLQDTRFINAHGLDGEGIQTSPAD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNI 228
           MA L   I  D P     +Q K          N N  +    L  DG KTG+T  +G+++
Sbjct: 181 MATLMRHIIRDVPDVYALYQDKQFAWNDITQFNRNKLLWDKALNVDGGKTGYTEQAGYSL 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF----YQQN 284
           V+SA +G + LIAV++G   +  R + S +LLS GF     +K +      F    ++  
Sbjct: 241 VSSATEGSRRLIAVVMGTPSQTIRAEASKNLLSYGFRFYDTQKVVQANESVFSYEIWKGA 300

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                  ++++   T    + +    K     +  F    K  ++ N +
Sbjct: 301 TDKVTLGVTDDKYITLPRNM-FKQLTKIVDIDQPLFAPIVKGDVVGNMV 348


>gi|332971215|gb|EGK10178.1| serine-type D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
          Length = 418

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 82/348 (23%), Positives = 141/348 (40%), Gaps = 25/348 (7%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +++        +     +   Y L++  TG V+A     HP+ PASLTK+MT Y+V   
Sbjct: 31  LLSVGEVFAEPQAEPLDIQTRSYVLMEMETGRVLAGKEEKHPYPPASLTKIMTEYLVLEE 90

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +K  +      + ISKNA+    +      G   T++     + + SAND +VA+AE + 
Sbjct: 91  VKSGRIRWKDEVKISKNAASIGEAQVNLVAGEKRTVEELFHAMAIHSANDASVALAEHIS 150

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMAILSWRIK 178
            +E+ FV  MN  +K LGL  +HF+N  G+              H  +A D+A L+ R+ 
Sbjct: 151 GSERAFVGKMNKEAKRLGLKKSHFINCTGLPSRSYPQPPEVKGEHRMSAEDIARLTRRLL 210

Query: 179 TDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTCASGFNIV 229
            D PQ +    +     +  +      PN+N         + G DG+KTG+T  +G++  
Sbjct: 211 RDHPQVIRTTSLPEYIFRQGEKRELILPNSNRMLPGSPHFYDGVDGVKTGYTREAGYSFT 270

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY------QQ 283
            +A +    LI V++G   ++ R   +  LL  GF N   +  +              + 
Sbjct: 271 GTARRDGMRLITVVMGTDSKSRRFAETEKLLDFGFQNYGMKTLLKKGKPVPKHGKVALRG 330

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
               EVP ++                    + K           ++  
Sbjct: 331 GEETEVPVVAGASRALPVRNGEKTPYTIRVEFKSGLEAPIRSGDVVGT 378


>gi|326402423|ref|YP_004282504.1| serine-type D-Ala-D-Ala carboxypeptidase [Acidiphilium multivorum
           AIU301]
 gi|325049284|dbj|BAJ79622.1| serine-type D-Ala-D-Ala carboxypeptidase [Acidiphilium multivorum
           AIU301]
          Length = 422

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 90/326 (27%), Positives = 136/326 (41%), Gaps = 10/326 (3%)

Query: 16  IFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
             P + +  T      Y L+D +TG VIA   PD PW PASLTKLMTAY+ +  +     
Sbjct: 65  AIPGVPMPPTLPQQASYVLMDADTGAVIAAKAPDQPWPPASLTKLMTAYLTYQAVAHGSL 124

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            +   + +S +A     S      G T+T+D  L  LI+ S ND AVA+A+++  +   F
Sbjct: 125 KMDQTVPVSVSAWHTGGSRMFISPGMTVTVDQLLHGLIIDSGNDAAVALAQAVAGSRSGF 184

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN+ +K LGL +TH+ N  G+      TTA D+A LS  I   +PQ++     K   
Sbjct: 185 VGLMNHEAKALGLKSTHYTNVDGLPNPDLRTTAMDVAKLSRDIVRTYPQFLKISVKKHFT 244

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  + N  +      DG+KTG T  +G  I A+A++  + LIAV+LG         
Sbjct: 245 FDKIRQRSWNPVLFHDPTVDGLKTGRTKEAGHCIDATALRNGRRLIAVVLGGPSWTVSTH 304

Query: 255 VSASLLSMGFYNKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              +LL  G+    + K               Y+       P  S  +           T
Sbjct: 305 DIEALLDYGYQFYANAKVAVAGKPAGTLKAPLYRTTAVAVGPAHSITMTIPALAAKTLKT 364

Query: 309 QMKEAKDKESHFIDFEKITLLKNKIT 334
            +              +   +     
Sbjct: 365 SVALD---PPPAAGVHRGQTVGTITV 387


>gi|148259268|ref|YP_001233395.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidiphilium cryptum
           JF-5]
 gi|146400949|gb|ABQ29476.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Acidiphilium cryptum JF-5]
          Length = 423

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 90/326 (27%), Positives = 136/326 (41%), Gaps = 10/326 (3%)

Query: 16  IFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
             P + +  T      Y L+D +TG VIA   PD PW PASLTKLMTAY+ +  +     
Sbjct: 66  AIPGVPMPPTLPQQASYVLMDADTGAVIAAKAPDQPWPPASLTKLMTAYLTYQAVAHGSL 125

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            +   + +S +A     S      G T+T+D  L  LI+ S ND AVA+A+++  +   F
Sbjct: 126 KMDQTVPVSVSAWHTGGSRMFISPGMTVTVDQLLHGLIIDSGNDAAVALAQAVAGSRSGF 185

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN+ +K LGL +TH+ N  G+      TTA D+A LS  I   +PQ++     K   
Sbjct: 186 VGLMNHEAKALGLKSTHYTNVDGLPNPDLRTTAMDVAKLSRDIVRTYPQFLKISVKKHFT 245

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               +  + N  +      DG+KTG T  +G  I A+A++  + LIAV+LG         
Sbjct: 246 FDKIRQRSWNPVLFHDPTVDGLKTGRTKEAGHCIDATALRNGRRLIAVVLGGPSWTVSTH 305

Query: 255 VSASLLSMGFYNKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              +LL  G+    + K               Y+       P  S  +           T
Sbjct: 306 DIEALLDYGYQFYANAKVAVAGKPAGTLKAPLYRTTAVAVGPAHSITMTIPALAAKTLKT 365

Query: 309 QMKEAKDKESHFIDFEKITLLKNKIT 334
            +              +   +     
Sbjct: 366 SVALD---PPPAAGVHRGQTVGTITV 388


>gi|225629999|ref|YP_002726790.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia sp. wRi]
 gi|225591980|gb|ACN94999.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia sp. wRi]
          Length = 368

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 5/324 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
            F   S     K     +LD  +   I ++  D    P+S++KLMT Y+ F +LK     
Sbjct: 15  PFSSYSYQFRTKAKQAVVLDLASDSFIFDHNSDEKMAPSSMSKLMTLYIAFDYLKAGIIH 74

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +     +S+ A E   S+   K+G  +T+   L+ + + S ND  + +AE +  +E+ FV
Sbjct: 75  MEDKFRVSRKAWERKGSSMFLKEGQFVTVRELLEGITIVSGNDACITLAEGIAGSEENFV 134

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++NL L+ +HF+N+ G     H+ +A+D+ +L+ RI TDFP+Y   F  + L  
Sbjct: 135 AEMNEVAQNLNLNDSHFVNSSGWPDGDHFMSAKDLVMLAKRIFTDFPEYYDLFSEQYLTY 194

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 N N  +   +G DG+KTG+T A G+ IVASA + D+ + AV+ G      R + 
Sbjct: 195 NEIVQKNKNLLLFHDIGVDGLKTGYTNAGGYGIVASAKRNDRRIFAVVNGLNTEKERIEE 254

Query: 256 SASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           +  L+     +   +K           +            ++ +V  T    ++   +++
Sbjct: 255 AKRLIQYSLNHFNTKKIFAQDSVVEEVNVLYGKDKKVPITVANDVTITYNRKLHDQIKVR 314

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
             + K+      +K   +     +
Sbjct: 315 I-EYKDMIPAPIKKGQEVGKVFVE 337


>gi|160895834|ref|YP_001561416.1| serine-type D-Ala-D-Ala carboxypeptidase [Delftia acidovorans
           SPH-1]
 gi|160361418|gb|ABX33031.1| Serine-type D-Ala-D-Ala carboxypeptidase [Delftia acidovorans
           SPH-1]
          Length = 389

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 93/329 (28%), Positives = 149/329 (45%), Gaps = 13/329 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                       Y L+D     V+     D P   ASLTKLMT Y+VF  L+ KK  L  
Sbjct: 27  TPPQPPEIAARNYLLVDVTANQVLGAKDIDAPIEQASLTKLMTGYLVFDALRAKKITLEQ 86

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A + P S         + +D+ +K +IV+S ND  +A+AE +  + + FV+ M
Sbjct: 87  RLPVSERAWKMPGSRMFIDPKMQVPVDDLIKGMIVQSGNDATMALAEGVGGSAENFVRLM 146

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K LG+  T + N  G+ + GH TTARD++IL+ R+  DFP+YMHY+  K     G 
Sbjct: 147 NEQAKALGMKNTSYKNPEGLTEPGHLTTARDLSILAQRLMQDFPEYMHYYSTKKYFYPGT 206

Query: 199 KY---PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----DQSLIAVILGALDRN 250
                 N N  +      DG+KTG T A+G+ +VA+A +       + LI+++LGA   N
Sbjct: 207 PASNGTNRNSLLFRDPTVDGLKTGHTAAAGYCLVATAKRDLPNVGSRRLISIVLGAASEN 266

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  LL+ G+      K  +        + ++   +      +  +  T       
Sbjct: 267 ARANESQKLLNWGYAAFDSVKLFDAEQAVATPEVWKGKANTVKIGRTTPIVVTVPAGSGG 326

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +  + ++     F K   +     K
Sbjct: 327 KLSTEVVR-QDPLIAPFTKGQAMGTLKVK 354


>gi|238758038|ref|ZP_04619219.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia aldovae ATCC
           35236]
 gi|238703792|gb|EEP96328.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia aldovae ATCC
           35236]
          Length = 403

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 32  VNLKTMIPGVPQIDAEAYVLIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 92  IGPEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  T F   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDSFVNLMNNYVKALGLQNTQFKTVHGLDAEGQYSSARDMALIGQALIRDVPDEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++   T   
Sbjct: 272 HTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDAYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 332 GRMKDLKASYVLNTPEIHAPLAKNQVVG 359


>gi|159043475|ref|YP_001532269.1| serine-type D-Ala-D-Ala carboxypeptidase [Dinoroseobacter shibae
           DFL 12]
 gi|157911235|gb|ABV92668.1| serine-type D-Ala-D-Ala carboxypeptidase [Dinoroseobacter shibae
           DFL 12]
          Length = 393

 Score =  192 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 85/324 (26%), Positives = 137/324 (42%), Gaps = 7/324 (2%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK-AML 76
           P    A   +     ++D  TG V+ E   D P  PAS++KLMT Y++F  L++     L
Sbjct: 19  PAAQAAFETRAEAAYVVDVTTGTVLLEKNADVPLPPASMSKLMTLYMLFEALEKNPAVTL 78

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T   +S  A     S     +    T ++ +K +IV+S ND  V +AE L  TE+ F +
Sbjct: 79  DTTFRVSARAMAKGGSTMFLTERDRPTAEDLIKGIIVQSGNDATVVVAEGLAGTEEAFSR 138

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M      +GL+ + F N+ G     H  + RD+ IL+ RI  D+P+Y  YF +      
Sbjct: 139 LMTEKGAAIGLTQSTFTNSSGWPDPQHRMSMRDLGILTQRIIEDYPEYYGYFAMSEWGFD 198

Query: 197 ---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +   N N  +   +GADG+KTG T  +G+ +V SA QG + +I VI G      R 
Sbjct: 199 GRAPQNRFNRNPLLKLDIGADGLKTGHTQEAGYGLVGSAQQGARRIIFVITGLETDRARA 258

Query: 254 KVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           + S  ++S  F    ++                  +  V  +S E       ++   + +
Sbjct: 259 EESERIVSWAFRQFVEKDMAEAGRHLADLPVWVGEAETVGLVSPEDIRPLVPMVASGSLV 318

Query: 311 KEAKDKESHFIDFEKITLLKNKIT 334
            E +              L   + 
Sbjct: 319 AEIEADTPIAAPITAGQQLAELVI 342


>gi|294635241|ref|ZP_06713743.1| D-alanyl-D-alanine carboxypeptidase DacA [Edwardsiella tarda ATCC
           23685]
 gi|291091358|gb|EFE23919.1| D-alanyl-D-alanine carboxypeptidase DacA [Edwardsiella tarda ATCC
           23685]
          Length = 387

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 89/326 (27%), Positives = 140/326 (42%), Gaps = 12/326 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             F  +        + L+D  TG ++A+  PD   NPASLTKLMT YVV   L + +  L
Sbjct: 22  SAFPLVPPHIDAASWVLMDAQTGQILAQGNPDARRNPASLTKLMTNYVVERALDQGRIGL 81

Query: 77  TTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             P+ I  +A      +         K G   T+ + ++ +I+ S ND  VA+A+ +   
Sbjct: 82  NDPVPIGNDAWATRNPSFKGSSLMFLKPGDKATVSDLIRGIIIDSGNDACVALADYVSGD 141

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           +  FV+ MN   + L L  THF   HG+   G Y++ARD+A L+  I      Y H++  
Sbjct: 142 QAGFVRLMNGYVQQLHLQNTHFETVHGLDAPGQYSSARDLAQLARAIILHEQPYYHFYAQ 201

Query: 191 KGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA-SAIQGDQSLIAVILGALD 248
           K L   G    N N       L  DGMKTG T ++GFN+VA S     Q LIAV++GA  
Sbjct: 202 KSLSWNGVTQNNRNGLLWDQDLHVDGMKTGHTASAGFNLVASSIDPHGQRLIAVVMGADS 261

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEII 304
              R   +  LL  G  N    + +        +  +            + +  T  +  
Sbjct: 262 SRGREVQAKKLLQWGERNFETVQLVARDRAITSQQVWYGQQKTVALGNPQNIYYTLPKGE 321

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLK 330
             + ++    + +       +  ++ 
Sbjct: 322 LRDVKVDYTLNHDYLEAPLARGQVVG 347


>gi|163797884|ref|ZP_02191828.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium BAL199]
 gi|159176846|gb|EDP61414.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium BAL199]
          Length = 421

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 95/335 (28%), Positives = 163/335 (48%), Gaps = 5/335 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + L  I + +L    P +  AE        +LD +TG ++ E       +PASLTK+MT 
Sbjct: 9   RILATIVLGLLWLAAPSMGRAEVTAKYAALVLDADTGTILFERQAAAERHPASLTKIMTL 68

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  A+   PS    + G ++   +A+  L+ KSAND+AV 
Sbjct: 69  YMLFDAIEHGKISLNQRLKVSARAAGQAPSKLGLQPGDSIRAKDAILALVTKSANDVAVV 128

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE+L +TE +F + M + ++ LG+  T F NA G+      +TA DMA+L+  I+ DFP
Sbjct: 129 VAEALGETEPRFARLMTDRARRLGMRNTTFRNASGLHHPNQISTAYDMAMLALAIRRDFP 188

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +   YF  +     G++Y N N  +G + G DG+KTG+  ASGFN+VAS  +  + LI V
Sbjct: 189 KEYAYFSTRSFSWGGREYGNHNKLLGHYEGTDGIKTGYIGASGFNLVASVERNGRRLIGV 248

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCT 298
           + G      R++    LL+ GF    + +  + +         ++     V   S +   
Sbjct: 249 VFGGRSGPLRDRHMKRLLTSGFEKADEIRVAHVVPPIPHPRPEREVQLASVETASVDNSN 308

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
               ++    +++     E       ++     +I
Sbjct: 309 PVHALVQVAPEVESGSRDEGAEWGI-QVGAYATEI 342


>gi|317121887|ref|YP_004101890.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591867|gb|ADU51163.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
          Length = 438

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 17/325 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L+D  TG  +     D    PASL K+MT  +VF  L+E +  L   + +S+
Sbjct: 77  NIQARSAVLVDATTGQELYAQNADELIPPASLAKIMTLDLVFHALEEGRLALDQQVPVSE 136

Query: 85  NASEYP-------PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            A           PS    + G  + +++ ++ + V S ND +  +AE++  +E+ FV+ 
Sbjct: 137 AAWRLSVQAGLGGPSAMFLEVGERVRIEDLIRGVAVASGNDASTVLAEAVAGSEEAFVRL 196

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  +G+  + F N+HG+     + TARDMA L+  +    P  + Y  +K  E K 
Sbjct: 197 MNQHAAEIGMKNSVFSNSHGLPGGQQHVTARDMARLALHVLEAHPDILRYTSLKYFEWKD 256

Query: 198 K-KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
               PN N  +      DG+KTG    +G+++VA+A  GD+ L++V+LGA     R   S
Sbjct: 257 FAPQPNYNRLIFRDPRVDGLKTGHLSEAGYHLVATARDGDRRLVSVVLGAASDALRVGES 316

Query: 257 ASLLSMGFYNKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             LL  GF   T+ +          +      ++     P  +  V   + +     T++
Sbjct: 317 QRLLDYGFQQFTNTRVAFGENGRQGVSVYKGARSQVTVEPATAPVVTVPKTDAGEVRTRV 376

Query: 311 KEAKDKESHFIDFEKITLLKNKITK 335
              + +E      EK   +     +
Sbjct: 377 ---EMQEPLVAPLEKGQRVGTLTIE 398


>gi|326315218|ref|YP_004232890.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372054|gb|ADX44323.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 393

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 22/358 (6%)

Query: 1   MRQFLVIIAMAMLSNIFP--------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+ FL ++    ++                        Y LLD  +G V+A    D P  
Sbjct: 5   MKSFLPLLRSFAMAAALAPAALWAQVQAPQPPEIAARNYLLLDVTSGQVLAAKDIDAPVE 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            ASLTKLMT Y+VF  L  +K  L   + +S  A + P S         + +D+ LK +I
Sbjct: 65  QASLTKLMTGYLVFDALSSRKITLEQKLPVSVLAWKMPGSRMFIDPKMQVPVDDLLKGMI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND ++A+AE +  + + FV+ MN+ +K LG+  T + N  G+ + GH TTARD++I
Sbjct: 125 VQSGNDASMALAEGVGGSAENFVKLMNDQAKALGMKNTAYKNPEGLTEPGHTTTARDLSI 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEI---KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           L+ R+  DFP+YMHY+  K             N N  +      DG+KTG T A+G+ +V
Sbjct: 185 LATRLMKDFPEYMHYYSTKHYAYPGTPPSNGTNRNSLLFRDPTVDGLKTGHTAAAGYCLV 244

Query: 230 ASAIQG-----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFY 281
           A++ +       + L++++LG    N R   S  LL+ G+      K  +          
Sbjct: 245 ATSKRDFPNVGQRRLLSIVLGTASENARANESQKLLNWGYTAYDAVKLFDGGQPAATPAL 304

Query: 282 QQNLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +   N +     +   V          +TQ+       +     + I  LK  +  +
Sbjct: 305 WKGTQNTIKIGRPDPIVVTVPSGSAGKISTQIVRQDPLVAPLTKGQSIGTLKVSLGDQ 362


>gi|163746820|ref|ZP_02154177.1| D-alanyl-D-alanine carboxypeptidase [Oceanibulbus indolifex HEL-45]
 gi|161379934|gb|EDQ04346.1| D-alanyl-D-alanine carboxypeptidase [Oceanibulbus indolifex HEL-45]
          Length = 396

 Score =  192 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 146/343 (42%), Gaps = 14/343 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A A+   +    + A   +     +LD  TG V+     D P  PAS++KLMT Y+ F
Sbjct: 4   LFAAAVALVLTLQPAAAFDTRATAAYVLDQTTGTVLLAKNADEPLPPASMSKLMTLYMAF 63

Query: 67  SF----LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
                  +     L   + +S++A  Y  S         +++++ ++ +IV S ND +  
Sbjct: 64  EAVERGKQNGGLDLVEELPVSEHAMSYGGSTMFLDTTDRVSVEDLIRGVIVLSGNDASAV 123

Query: 123 IAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           IAE+L     E  F + M   ++ +G++ + F N++G  Q GH  + RD+ +L+ RI +D
Sbjct: 124 IAEALSPDGTEYGFARLMTQRAQQMGMTNSTFANSNGWPQAGHLMSVRDLGLLANRIISD 183

Query: 181 FPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           +PQ+   F  +         +   N N  +G  +GADG+KTG T  +G+ +V SA QGD+
Sbjct: 184 YPQFYPLFAEREFAFDGRAPQNKLNRNPLLGLGIGADGLKTGHTNEAGYGLVGSAKQGDR 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNIS 293
            +I V+ G      R + + S+++  F   T R       +            +    + 
Sbjct: 244 RVIFVLSGLDSAAARAQEAESVVNWAFRQFTQRDLGQAGKQIANAPVALGTTQSVGLELK 303

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +++              +             K   L   +  +
Sbjct: 304 DDLSMLVPVTGGDEIAAEVI-YTGPFQAPITKGDELGELVVDR 345


>gi|170730550|ref|YP_001775983.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa M12]
 gi|167965343|gb|ACA12353.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa M12]
          Length = 347

 Score =  192 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 11/314 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE----- 88
           +D  +G V+A         PASLTK+MT+YV+ + +K  K      + +++NA       
Sbjct: 1   MDFASGQVLAGENIHTHLAPASLTKVMTSYVIAAEIKNGKVHRDDQMMMTENAWRKGGAG 60

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S S F    T  L++  + +IV+S ND A+A+AE +  +E+ F   MN+ ++ +G+ 
Sbjct: 61  TDGSYSGFPVNKTARLEDMEQGMIVQSGNDAAIALAEHVAGSEEAFASLMNSYAQRIGMK 120

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            +HF++A G+   GHY++A DMA+L   +  D P+   Y ++K L + G K  N N  + 
Sbjct: 121 NSHFVDATGLSAEGHYSSAYDMALLGRALIRDSPETYAYNKVKELVVNGIKQSNRNLLLW 180

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                DG+KTG T  +G+ I+ SA +GDQ ++ V++G +    R + S +LL+ GF    
Sbjct: 181 RDPSVDGIKTGHTSEAGYCIINSAKRGDQRILTVVMGDVSEKKRAEDSLALLNWGFRFFE 240

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEAKDKESHFID 322
                         +    +V  +   V         +    +    ++  ++ E+    
Sbjct: 241 THTLYEPGKVVIKHKIWKGQVSEVQLGVTRPLFVTVQRGRYNDLKPSIEVPRNLEAPIKP 300

Query: 323 FEKITLLKNKITKK 336
            + +  +K  +  K
Sbjct: 301 GQSVGKVKVTLDGK 314


>gi|226323183|ref|ZP_03798701.1| hypothetical protein COPCOM_00955 [Coprococcus comes ATCC 27758]
 gi|225208373|gb|EEG90727.1| hypothetical protein COPCOM_00955 [Coprococcus comes ATCC 27758]
          Length = 425

 Score =  192 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 11/322 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +++ + G V+ E   D    PAS+TK+MT  ++F  L +      T +T S+
Sbjct: 69  ELSAESAVIMEASGGQVLLEKNADEKKPPASVTKVMTLLLIFDALADGTITPDTEVTTSE 128

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G   T+D  +K + V SAND  VA+AE +  +E  FV+ MN  S  
Sbjct: 129 YAASMGGSQVFLEAGEKQTVDTMIKCIAVASANDACVAMAEKIAGSEPAFVEKMNQRSAG 188

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           LG++ THF+N +G+   GH TTARD+A++S  + T +PQ   Y  I    I         
Sbjct: 189 LGMTNTHFVNCNGLDTEGHLTTARDIALMSRELITKYPQIEDYSTIWMENITHTTAKGSS 248

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  +  +  A G+KTG T  + F + A+A +   ++IAV++   D  TR K +
Sbjct: 249 EFGLSNTNKLIRQYEYATGLKTGSTSGAKFCLSATARKDGVNMIAVVMAEPDSKTRIKDA 308

Query: 257 ASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            ++L+ GF       D K +  I+    +  +  +    + E         +  + +++ 
Sbjct: 309 IAMLNYGFGKCSIYQDEKALEKIVYAEVKHGMQEKAKGETLEGFRYVDTSGSDLSAVEKE 368

Query: 314 KDKESHFIDFEKITLLKNKITK 335
              +      +K   +   I +
Sbjct: 369 VQIQKQTAPVKKGDQIGEVIYR 390


>gi|331085114|ref|ZP_08334200.1| hypothetical protein HMPREF0987_00503 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407897|gb|EGG87387.1| hypothetical protein HMPREF0987_00503 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 397

 Score =  192 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 94/362 (25%), Positives = 153/362 (42%), Gaps = 29/362 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----------------NKLPYYTLLDTNTGHVIA 43
           MR  L ++ ++++       ++                           L++ +TG +I 
Sbjct: 1   MRTILAVV-LSVILCTGTVCAMPPDGKVLQEEVESEKKNELELTAQSAVLMEASTGKIIY 59

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           E   +    PAS+TK+MT  ++   +++ K  L   +T+S+ A+    S    + G   T
Sbjct: 60  EKQKEEERPPASVTKVMTMLLILDAVEDGKIKLEDEVTVSEYAASMGGSQVFLEPGEVQT 119

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +D  LK + V SAND  VA++E +  +E+ FV+ MN  +K LG+  THF+N +G+   GH
Sbjct: 120 VDTMLKCIAVASANDACVAMSEYISGSEEAFVEQMNVRAKGLGMEHTHFVNCNGLDADGH 179

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADG 215
            TTA D+A++S  + T  P+   Y  I    I  K           NTN  V  +  A G
Sbjct: 180 LTTAYDIALMSRELITKHPEIEKYSMIWMENITHKTNKGTSEFGLSNTNKLVRHYPYATG 239

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTG T  + F I A+A +    LIAVI+ A D   R K + +LL+ GF   T       
Sbjct: 240 LKTGSTSKAKFCISATARKDGMDLIAVIMAAPDSKMRVKDATTLLNYGFGKCTKYVDKEK 299

Query: 276 IIKDFYQ---QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 +                         N +   K+   K+      +K T +   
Sbjct: 300 GGLKAVKVDGGTKEKVRIEPEAIFQYVDTTGANLSEIQKKLVLKKGLSAPLKKGTTVGKL 359

Query: 333 IT 334
           + 
Sbjct: 360 VY 361


>gi|255284455|ref|ZP_05349010.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
 gi|255265000|gb|EET58205.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
          Length = 508

 Score =  192 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 86/322 (26%), Positives = 144/322 (44%), Gaps = 12/322 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++ ++G V+ E       +PAS+TK+MT  ++F  L++    L   +  S 
Sbjct: 109 ALTSPSALLMEASSGTVLYEKDAHTRRSPASVTKIMTTLLIFEELEKGTLKLDDEVVTSA 168

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A     S    ++G   T+D  LK ++V S ND +VA+AE +  TE +FV  MN  +  
Sbjct: 169 HAKSMGGSQVFLEEGEKQTVDTLLKCILVSSGNDASVAMAEHIGGTEAEFVSRMNEKAAE 228

Query: 145 LGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK---- 199
           LG++ THF +  G+     HYTTA D+A++S  + T FPQ   Y  I    I        
Sbjct: 229 LGMADTHFEDCCGLTDSDNHYTTAYDIALMSRELITRFPQVYDYTTIWMDTITHVTRRGS 288

Query: 200 ----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 NTN  + ++ G  G+KTG T  + F + A+A++ D  LI+V++   D  TR   
Sbjct: 289 SEFGLANTNKLLRSYDGCMGLKTGSTSKALFCVSATAVRNDIELISVVMAGPDSKTRFAD 348

Query: 256 SASLLSMGFYNKTDRKKINYIIKD---FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           +A++L+ GF                    +        + +EE      +  N +   ++
Sbjct: 349 AAAMLNYGFGKCRLYIDDEPPELPHLSVKRGVEDTVSCHYAEEFRYLDAQGRNLDDIERK 408

Query: 313 AKDKESHFIDFEKITLLKNKIT 334
            +  E       K +     + 
Sbjct: 409 LELPEELSAPVSKESAAGRMVY 430


>gi|332977441|gb|EGK14217.1| serine-type D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
          Length = 395

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 97/337 (28%), Positives = 148/337 (43%), Gaps = 11/337 (3%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           IA    S       +A         L+D +TG V+ E        PAS+TK+MT  +V  
Sbjct: 16  IAAGPTSVWAAEDGLAP--SSKSAVLVDADTGTVLYEKNSREKLPPASITKIMTMLLVME 73

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L++ +      +  S+ AS    S    + G  M L++ LK + V SAND +VA+AE L
Sbjct: 74  ALEKGQISYEDRVRTSEYASSMGGSQIFLETGEVMKLEDLLKAVAVGSANDASVALAEHL 133

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQ 183
             TE++FV+ MN  ++ LG+  T F N +G+    HY+TARD+AI+S  +          
Sbjct: 134 AGTEERFVEMMNRRAEELGMKDTRFQNPNGLPASDHYSTARDIAIMSRELLKHREITRFT 193

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             +   ++    K     NTN  V  + G DG+KTGFT  +GF + A+A + D   IAV+
Sbjct: 194 KTYEDYLRKESKKPFWLVNTNKLVKFYEGLDGLKTGFTREAGFCLAATAKRRDLRAIAVV 253

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS----EEVCTT 299
           +G  D   RN+    +L   F    +R            Q    E   I     ++    
Sbjct: 254 MGEPDVKARNREITRMLDFAFNQYANRVIYKPGQLIGKLQVDKGEKSMIEVRSPQQFSVL 313

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            K+  N +    + +  E       K  LL     +K
Sbjct: 314 MKKGENADDYRTKIRW-EKLKAPVRKGQLLGAVEVEK 349


>gi|296132902|ref|YP_003640149.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermincola sp. JR]
 gi|296031480|gb|ADG82248.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermincola potens JR]
          Length = 372

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 83/341 (24%), Positives = 136/341 (39%), Gaps = 20/341 (5%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F   +I     L      L+           L+D NTG V+          PAS TK
Sbjct: 1   MKRFRAGIIFFTIFLLKANTCLAWQPAVSADAAVLMDANTGQVLYAKNAHKRRPPASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++T  +               + +S  A+    S+     G  +TLD  ++  ++KS ND
Sbjct: 61  ILTGILALD-----MGNPAETVVVSPRAAAVGESSIYLSAGEKLTLDELIQGALMKSGND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
              AIAE +  + + F Q MN  +K LG   ++F+N HG+    HY+TA D+A+++    
Sbjct: 116 ACAAIAEHIGGSIEMFSQLMNLKAKMLGAWNSNFINPHGLPAKNHYSTAYDLALIARY-A 174

Query: 179 TDFPQYMHYFQIKGLEIKGK------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
               ++      K  EI            NTN  +  ++ ADG+KTG T A+G  +V+SA
Sbjct: 175 MQNRRFAEIVAQKEKEIDWYGQSWNRHLKNTNKLLWRYIWADGIKTGTTKAAGQCLVSSA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +  + LIAV+L + D   R   S  L   GF N   ++         Y    +   P +
Sbjct: 235 SKDCRKLIAVVLKSGD---RYGDSIQLFEYGFNNYYYQQVAVAGEYFGYADVKNGLYPKV 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLK 330
                +    ++  +      K            +    L 
Sbjct: 292 QLAFKSDLGVLVPKDRPGSLEKRLVLERKPQAPVKAGQTLG 332


>gi|169831388|ref|YP_001717370.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638232|gb|ACA59738.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 366

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/318 (23%), Positives = 124/318 (38%), Gaps = 6/318 (1%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     LL+  +G ++ E  P      AS+TK+MT  +    L   KA L   I 
Sbjct: 14  KGPETEAESAVLLEPVSGQILYEKEPYKEQPIASVTKIMTMLLAVEALDSGKAKLDDIIV 73

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S++A+    S         M+    L  +   SAND +VAIAE +  +E+ FVQ MN+ 
Sbjct: 74  TSEHAAGMGGSQIYLAPQEKMSFREMLISVATGSANDASVAIAEHVAGSEEAFVQMMNDR 133

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGLEIKGKKY 200
           +  LG   TH++N  G+   GHY+ A D A++          + +   +   L     K 
Sbjct: 134 AAELGAKHTHYVNPTGLPAEGHYSCAYDQAVILREALKYPLFREVSAIKEYDLRGGEFKL 193

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  +  + GAD  KTG+T  + + + +S  + +  LIAV+LG  +     + S  L 
Sbjct: 194 WNTNKLLWWYPGADAGKTGWTNEAKYCLASSVKKDNLRLIAVVLGVPETKGHFRESIKLY 253

Query: 261 SMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           + GF                     +   +     +  EVC                +  
Sbjct: 254 NWGFARFEAVVLAGEGELIKTLPVDKGVDTTVDLIVPHEVCVVVPRGEK-EGVDFRVELP 312

Query: 317 ESHFIDFEKITLLKNKIT 334
                  ++   L + + 
Sbjct: 313 SWPAAPLKQDEALGSYVV 330


>gi|288554616|ref|YP_003426551.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pseudofirmus
           OF4]
 gi|288545776|gb|ADC49659.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pseudofirmus
           OF4]
          Length = 444

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 142/362 (39%), Gaps = 36/362 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+  + MA L         A         L++  +G ++ +   D     AS+TK+M+ Y
Sbjct: 13  FMSFVLMATLIVQPTTADAALDLDAESAILVEAESGKILYQKNIDAVLPLASMTKMMSEY 72

Query: 64  VVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           ++   + E +      + IS        +   SN   ++  T T+ +  + + + SAN  
Sbjct: 73  LILEAISEGRISWDQQVPISDWVRTLSLQTALSNVPLRQDETYTVRDLYESVAIYSANAS 132

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYT 165
            +A+AE +  +E +FVQ MN   + LGL   +F+N+ G+                  +  
Sbjct: 133 TIALAELISGSETQFVQLMNEKGEELGLEDFNFVNSSGLNNRDLQGNHPEGTGAEAENEM 192

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA------VGTFLGAD 214
           +AR  A L++ +  D+P+ +    I   +      +     N NW          + G D
Sbjct: 193 SARATAKLAYALLRDYPEVLETASIPMKDFQAGPGEVIPMENWNWMLPTIRPQHDYEGID 252

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTGFT A+G     +A +    LI+V++    R+ R   +  LL  GF N +  +  +
Sbjct: 253 GLKTGFTSAAGNTFTGTAERDGMRLISVVMRTESRDARFNETRKLLDFGFNNFSTVELFD 312

Query: 275 YI-------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                                  + +E +    +   N    ++   D+E    D E + 
Sbjct: 313 EGHVVEGEETLPVAAGKEREVAISSAEALSAVVRNGQNDQYSVELGLDQEKLNEDGELVA 372

Query: 328 LL 329
            L
Sbjct: 373 PL 374


>gi|326202106|ref|ZP_08191976.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium papyrosolvens
           DSM 2782]
 gi|325987901|gb|EGD48727.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium papyrosolvens
           DSM 2782]
          Length = 408

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 78/316 (24%), Positives = 137/316 (43%), Gaps = 6/316 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L+D  +G V++E         AS+TK+MT  ++   +   +      +++S+
Sbjct: 55  DLRAKSAVLMDAASGKVLSEKNSHERLAIASVTKVMTMLLIMEAIDSGRFTFDDKVSVSE 114

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            ++    S +  + G   T+   +  L + S+ND+AVA+AE +  +E+ FV  MNN ++ 
Sbjct: 115 YSAGMGGSQAYMEPGEEFTVTEMMNALAIHSSNDVAVALAEKVSGSEETFVTDMNNKAQA 174

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PN 202
           LG+  T FM+  G+   G Y++A D+A++S  +    P+ + +        +   +   N
Sbjct: 175 LGMKDTKFMDCTGLNDDG-YSSAHDVALMSRELVMKHPKVLQFTGKWHDTFRNGTFDLYN 233

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  V  +   DG+KTGFT  +GFN+ A+  + +  L++V+LG  D NTR   S  LL  
Sbjct: 234 TNKLVKFYANCDGLKTGFTSKAGFNLSATTRRNNLRLVSVVLGEPDSNTRFAESRKLLDY 293

Query: 263 GFYNKTDRKKINYIIKD---FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           GF N                  ++     V  +     +            KE       
Sbjct: 294 GFANYEVINLDKRGNVVGNIPVKKGNKLSVSAVYGSDTSIMVSKGQKGKVEKEVALVPGL 353

Query: 320 FIDFEKITLLKNKITK 335
               E    +   I K
Sbjct: 354 SAPVEINQKVGEVIYK 369


>gi|85714340|ref|ZP_01045328.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           sp. Nb-311A]
 gi|85698787|gb|EAQ36656.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           sp. Nb-311A]
          Length = 499

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 104/316 (32%), Positives = 166/316 (52%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I M +   +     +   +    + L++ +TG V+       PW PAS+TKLMTAYV  +
Sbjct: 46  IWMVLAGLLIAGAPLRAAHATEAHLLIEADTGKVLEAENATFPWYPASITKLMTAYVTLT 105

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K  +  L T +T+S  A+   PS   F+ G+ +T+DNALK+++VKSAND+AV +AE +
Sbjct: 106 AVKHGRITLDTLLTVSPTAAAQSPSKMGFRPGTRVTVDNALKMMLVKSANDMAVVLAEGV 165

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +   F   MN  ++ LG++ T ++N +G+   G  ++ARD+AIL+     D P+Y ++
Sbjct: 166 GGSIDGFSAEMNAAAQRLGMTQTSYVNPNGLPADGQISSARDIAILARAFIHDLPEYEYF 225

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             I  +    +   N N  +G F GADG KTGF CASG+N+VASA Q  + LIAV+LGA 
Sbjct: 226 VHIPSIRYGRRVTHNFNKLIGRFPGADGFKTGFICASGYNLVASATQNGKRLIAVVLGAS 285

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               R   +A +L  GF N T       +        ++   PN+ +E+C  ++     +
Sbjct: 286 SGTMRAVRAAQMLERGFANNTLSWLRPALGTVDRLAPIAAAPPNLRDEMCGPKRMHPASD 345

Query: 308 TQMKEAKDKESHFIDF 323
                  +  +     
Sbjct: 346 EDNDVVANTSATSAAV 361


>gi|304321771|ref|YP_003855414.1| D-alanyl-D-alanine carboxypeptidase [Parvularcula bermudensis
           HTCC2503]
 gi|303300673|gb|ADM10272.1| D-alanyl-D-alanine carboxypeptidase [Parvularcula bermudensis
           HTCC2503]
          Length = 387

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/333 (24%), Positives = 131/333 (39%), Gaps = 4/333 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + L + ++ +        + + T   P   ++D  TG V+ E     P  PAS++KLMT 
Sbjct: 10  RLLCLASVVVGLTHGTVSAQSVTTDAPTALIMDGETGDVLFEKNARTPIPPASMSKLMTV 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            V    +   +    TP ++S+ A     S      G+ + L   LK +I  S ND A+ 
Sbjct: 70  AVALDMIATGELSADTPFSVSERAWRTGGSKMFVLVGTEIPLKELLKGIITVSGNDAAIV 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE++  ++  F   MN  +   GL+ +HF N HG+       TA D+A L+  I   +P
Sbjct: 130 VAENIAGSDAAFADIMNRKAARWGLTGSHFANPHGIPDPEQRMTALDIAKLARHIWDSYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
            Y + F +  +        N N  +G   GADGMKTG T  +GF +V SA +       V
Sbjct: 190 DYRYLFSLPEMTWSDITQRNRNPLLGL-EGADGMKTGHTEEAGFGVVGSASRDGVRRYIV 248

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTT 299
           + G      R   +  LL   F + +            +      LS  VP         
Sbjct: 249 VAGLPTSEARASTARRLLDTAFNDYSTVTFFTDGDRVGEAEVFGGLSETVPLEVSTAIRM 308

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            + +        +   +       E+   L   
Sbjct: 309 TRHVSAIRGASAKLLYESPVLAPVEEGDRLGVL 341


>gi|169832020|ref|YP_001718002.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638864|gb|ACA60370.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 400

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/349 (23%), Positives = 148/349 (42%), Gaps = 23/349 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL++I +  L       +           L+D +TG  + E   D    PAS TK++TA 
Sbjct: 8   FLILIPLCFLPAAGGAQAGEPEITGEAAVLMDLDTGRFLYEKNADRVMYPASTTKILTAL 67

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V    ++     +   +T+S+NA     S      G   +L+  L   ++ SAND A A+
Sbjct: 68  VA---VRNGYDRMDDRVTMSENAVYAGGSAIWSAPGEEFSLEELLWSALLGSANDAATAV 124

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE LC + ++F   MN  ++ LG   THF+N HG+    HYTTARD+A+++     +   
Sbjct: 125 AEHLCGSVEEFSAAMNAEARRLGAWNTHFVNPHGLHDERHYTTARDLALIARAALNEPLI 184

Query: 184 YMHYFQIKGLEIKGKK-----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                       +          NTN  +  + GA G+KTG+T  +G  +VA+A +  ++
Sbjct: 185 REMAGTKTYQLSRADPDALSLLVNTNKLLWRYEGAIGLKTGYTSQAGQCLVAAAERNGRT 244

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEV---PN 291
           ++AV+L +   N     S +LL+ GF        +              +    +     
Sbjct: 245 VLAVVLKSEGNNI-WTDSIALLNYGFNRFRALVPVTEGDAICSVPVVFGDGEAVLRAGSG 303

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL-----KNKITK 335
           ++  V   +   + +  ++   ++  +     E++  L       +I +
Sbjct: 304 LTHVVPVDEPAPVRWELRL--NRELVAPLRGGEQVGSLVVHCGGEEIGQ 350


>gi|71274450|ref|ZP_00650738.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa Dixon]
 gi|71900446|ref|ZP_00682578.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa Ann-1]
 gi|71164182|gb|EAO13896.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa Dixon]
 gi|71729811|gb|EAO31910.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa Ann-1]
          Length = 347

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 151/314 (48%), Gaps = 11/314 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE----- 88
           +D  +G V+A         PASLTK+MT+YV+ + +K  K      + +++NA       
Sbjct: 1   MDFASGQVLAGENIHTHLAPASLTKVMTSYVIAAEIKNGKVHRDDQVMMTENAWRKGGAG 60

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S S F    T  L++  + +IV+S ND A+A+AE +  +E+ F   MN+ ++ +G+ 
Sbjct: 61  TDGSYSGFPVNKTARLEDMEQGMIVQSGNDAAIALAEHVAGSEEAFASLMNSYAQRIGMK 120

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            +HF++A G+   GHY++A DMA+L   +  D P+   Y ++K L + G K  N N  + 
Sbjct: 121 NSHFVDATGLSAEGHYSSAYDMALLGRALIRDSPETYAYNKVKELVVNGIKQSNRNLLLW 180

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                DG+KTG T  +G+ I+ SA +GDQ ++ V++G +    R + S +LL+ GF    
Sbjct: 181 RDPSVDGIKTGHTSEAGYCIINSAKRGDQRILTVVMGDVSEKKRAEDSLALLNWGFRFFE 240

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEAKDKESHFID 322
                         +    +V  +   V         +    +    ++  ++ E+    
Sbjct: 241 THTLYEPGKVVIKHKIWKGQVSEVQLGVTRPLFVTVQRGRYNDLKPSIEVPRNLEAPIKP 300

Query: 323 FEKITLLKNKITKK 336
            + +  +K  +  K
Sbjct: 301 GQSVGKVKVTLDGK 314


>gi|220929171|ref|YP_002506080.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
 gi|219999499|gb|ACL76100.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
          Length = 408

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 6/316 (1%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L+D  +G V+ E         AS+TK+MT  +V   +   +      +++S+
Sbjct: 55  DLRAKSAVLMDAASGKVLTEKNSHERLAIASVTKIMTMLLVMEAIDAGRFTFDEKVSVSE 114

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            ++    S +  + G   T+   +  L + S+ND+AVA+AE +  +E+ FV  MNN ++ 
Sbjct: 115 YSAGMGGSQAYMEPGEVFTVTEMMNALAIHSSNDVAVALAEKVSGSEETFVTDMNNKAQA 174

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PN 202
           LG+  T FM+  G+   G Y+TA D+A++S  +    P+ + +        +   +   N
Sbjct: 175 LGMKDTKFMDCTGLNDDG-YSTAHDVALMSRELVIKHPKVLQFTGKWHDTFRNGTFDLYN 233

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  V  +   DG+KTGFT  +GFN+ A+ I+ +  LI+V+LG  D NTR   S  LL  
Sbjct: 234 TNKLVKFYANCDGLKTGFTNKAGFNLSATTIRNNLRLISVVLGEPDSNTRFAESRKLLDY 293

Query: 263 GFYNKTDRKKINYIIKD---FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           GF N                  ++     V  +     +            KE       
Sbjct: 294 GFANYEVINLDKKGNVVGNIPVKKGNKLSVSAVYGTDTSIMVSKGQKGKVEKEVALVPGL 353

Query: 320 FIDFEKITLLKNKITK 335
               E    +   I K
Sbjct: 354 SAPVEINQKVGEVIYK 369


>gi|114799690|ref|YP_760518.1| D-alanyl-D-alanine carboxypeptidase [Hyphomonas neptunium ATCC
           15444]
 gi|114739864|gb|ABI77989.1| D-alanyl-D-alanine carboxypeptidase [Hyphomonas neptunium ATCC
           15444]
          Length = 378

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 139/340 (40%), Gaps = 12/340 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  ++ +  LS      +        Y  ++D  TG ++     D P  PAS+TK+MTA+
Sbjct: 2   FAALLTLGALSGA-SVSAQMIDTPAEYAVIMDHATGKILYSKRGDEPMTPASMTKMMTAF 60

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  +   +  LT   T+S++A                   T T++  L  +I  S ND
Sbjct: 61  VVFELIDRGELSLTDKFTVSEDAWRRGGFPSGTSTMGLVPKDTPTVEELLHGVITMSGND 120

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             + +A+ +  +E+ F + M   +  LGLS+ +F+N  G+   GH  +A D+A L+    
Sbjct: 121 ACIVLAQGISGSEEAFSRRMTEMAHELGLSSVNFVNTTGLEGDGHVVSAEDLARLAKMTI 180

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             +PQY  ++ +     +     N N  +    GADG+KTG   +SG+ + ASA++    
Sbjct: 181 DKYPQYYEWYSLPSYTWREYTQANRNPLLEV-AGADGLKTGHLESSGYGLTASAVRDGVR 239

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISE 294
              V+ G      R + S  L+ + F +   +            + +         +++E
Sbjct: 240 RTIVVNGLPTMAARAQESERLMRVAFQSFDLKTIGPETLVLPDVEVWLGEARAVPVSLAE 299

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +     +       ++   D        +K   +   + 
Sbjct: 300 PIEVAGHKAAFSKANVEIVLD-GPVKAPLKKGDQVGRLVI 338


>gi|299530593|ref|ZP_07044011.1| serine-type D-Ala-D-Ala carboxypeptidase [Comamonas testosteroni
           S44]
 gi|298721416|gb|EFI62355.1| serine-type D-Ala-D-Ala carboxypeptidase [Comamonas testosteroni
           S44]
          Length = 390

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 15/329 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +        Y L+D   G V+     D P   ASLTKLM+AYVVF  L+ KK  L  
Sbjct: 27  AAPVPPEIAARNYLLVDVTAGQVLGAKDVDAPVEQASLTKLMSAYVVFDALRSKKITLEQ 86

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A + P S         + +++ L  +I++S ND  +A+AE++  T + FV+ M
Sbjct: 87  RMPVSERAWKMPGSRMFIDPKMQVPVNDLLSGMIIQSGNDATMALAEAVGGTAENFVKMM 146

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N+ +K LG+  T + N  G+ + GH TTARD++IL+ R+  DFP+YMHY+  K     G 
Sbjct: 147 NDQAKALGMKNTSYKNPEGLTEPGHLTTARDLSILAQRLMHDFPEYMHYYATKQYSYPGT 206

Query: 199 KY---PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----DQSLIAVILGALDRN 250
                 N N  +      DG+KTG T A+G+ +VA+A +       + L++++LG     
Sbjct: 207 PASNGSNRNALLFRDPTVDGLKTGHTNAAGYCLVATAKRDLPNVGQRRLLSIVLGTASEK 266

Query: 251 TRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEE----VCTTQKEI 303
            R   S  LL+ G+      K       +      +  +N V     +    V       
Sbjct: 267 ARANESQKLLNWGYTAFDAVKLFDSDQPVATPAVWKGAANAVKIGKADGAVVVTVPSGTG 326

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNK 332
               T++       +     + + +LK K
Sbjct: 327 GKLTTEVVRQDPLIAPIAKGQSMGVLKVK 355


>gi|160880719|ref|YP_001559687.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
 gi|160429385|gb|ABX42948.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
          Length = 450

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 12/330 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              ++   +       L++ +TGH+I          PAS+TK+MT  ++F  L   +  +
Sbjct: 86  AAEIAGDLSLTSEAVVLMEGSTGHIIYSKNEIKELRPASITKIMTLLLIFDALDSGQIKM 145

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           T  +++S++A+    S    +   T  +D  LK + + SAND +VA+AE +  +E+ FV 
Sbjct: 146 TDQVSVSEHAASMGGSQVFLEPFETQDVDTMLKCISIASANDASVAMAEFIAGSEEAFVS 205

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  +K LG+  T+F+N +G+    HYT A D+A++S  +    P+  +Y  +   +  
Sbjct: 206 KMNQKAKELGMDHTNFVNCYGLDTDNHYTCALDVALMSRELIMKHPEISNYSTVWMDKFV 265

Query: 197 GKK--------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                        NTN  + ++ G  G+KTG T  + + + A+A +    LIAV++ A D
Sbjct: 266 HTTKRGQTEFGLNNTNKLIKSYQGITGLKTGSTGLAKYCLSATARRDGMDLIAVVMAAPD 325

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN----EVPNISEEVCTTQKEII 304
             TR   +A LL+ GF N +        ++                 +  +      +  
Sbjct: 326 TKTRFAEAAKLLNYGFANCSIYTDNGEGLEIPEVAVKKGIQETVGGKLDNKFSYLCMKGS 385

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           N     KE K  ES         ++     
Sbjct: 386 NPANITKEIKMSESLEAPVSITDVIGEITY 415


>gi|317048758|ref|YP_004116406.1| beta-lactamase [Pantoea sp. At-9b]
 gi|316950375|gb|ADU69850.1| Beta-lactamase [Pantoea sp. At-9b]
          Length = 389

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 95/351 (27%), Positives = 155/351 (44%), Gaps = 19/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +++ L++    M+            PF     +     + L+D  TG ++    PD   N
Sbjct: 2   LKRRLLVTVSGMIVWASLAQADDGMPFPLTPPSIDAASWVLMDATTGQILTAGNPDEERN 61

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDN 106
           PASLTKLMT YVV   + + K      +T+ K+A                K G  +T+ +
Sbjct: 62  PASLTKLMTGYVVDRAIDQHKISRDDVVTVGKDAWAAGNPVFKGSSLMFLKPGDKVTVRD 121

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I+ S ND  VA+A+ +  +++ FV  MN+  + LGL+ THF   HG+   G +TT
Sbjct: 122 LSRGVIIDSGNDACVALADYVAGSQQNFVTMMNSYVQKLGLTHTHFETVHGLDAPGQHTT 181

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASG 225
           ARD+A+LS  I +  P +   +  K L   G    N N       L  DG+KTG T  +G
Sbjct: 182 ARDLAVLSRAIISGEPDFYAMYSEKTLTWNGITQNNRNGLLWDNNLHVDGLKTGHTETAG 241

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFY 281
           FNI+AS+I G   LIAVI+G      R + +  LL  G  +    +  +   K    + +
Sbjct: 242 FNIIASSIVGQHRLIAVIMGGKSSKGREEQARKLLVWGQNSFDTVQLFHAGKKIGTENVW 301

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             N        ++++  +       N + K   D++      +    +   
Sbjct: 302 YGNPHQVDVGTTQDIYLSLPRGEVQNVKAKYIIDRKDLEAPLKANEQIGEI 352


>gi|294788907|ref|ZP_06754147.1| serine-type D-Ala-D-Ala carboxypeptidase [Simonsiella muelleri ATCC
           29453]
 gi|294483009|gb|EFG30696.1| serine-type D-Ala-D-Ala carboxypeptidase [Simonsiella muelleri ATCC
           29453]
          Length = 411

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/323 (27%), Positives = 143/323 (44%), Gaps = 3/323 (0%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            ++    +  A T     Y + D  +  ++A    D    PASLTK+MTAY+VF  L E 
Sbjct: 46  SASAPIGVIDAPTIAATAYLVKDLQSNQILASKDIDKSIEPASLTKVMTAYIVFKNLNEG 105

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K      + +S+ A +   S    +    +++ + +K LIV S ND A+ +AE L  +E 
Sbjct: 106 KLKPEQMLKVSEKAWKVEGSRMFLEMKKPVSVADLIKGLIVHSGNDAAITLAEGLSGSEA 165

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           KFV  MN  +K LG++ THF N  G+    H TT +D+  LS  I  DFP Y   + +K 
Sbjct: 166 KFVDLMNAEAKRLGMNQTHFENTTGLPSPKHLTTVQDLMTLSDAIIHDFPDYYKIYSLKE 225

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G K PN N  +      DGMKTG T ++G+N++AS+ +  + ++++++G   +  R
Sbjct: 226 FTYNGIKQPNRNLLLFRDPSVDGMKTGHTSSAGYNLIASSKRNGRRVVSIVVGTASQEAR 285

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
              S+ LL+    N    K           +      P++           + +      
Sbjct: 286 ATESSKLLNFALQNFDTPKMYQAGQSVARIKVFKGASPDVPIGFLNDTFMTLPHEHNKDI 345

Query: 313 AKDKE---SHFIDFEKITLLKNK 332
               E         +K T +   
Sbjct: 346 TPLLETRQPVLAPIKKGTEMGTI 368


>gi|83590204|ref|YP_430213.1| Serine-type D-Ala-D-Ala carboxypeptidase [Moorella thermoacetica
           ATCC 39073]
 gi|83573118|gb|ABC19670.1| Serine-type D-Ala-D-Ala carboxypeptidase [Moorella thermoacetica
           ATCC 39073]
          Length = 385

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/344 (25%), Positives = 155/344 (45%), Gaps = 21/344 (6%)

Query: 3   QFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +FL   +     LS I P  + A   +   Y L+D  TG V+    P      A  TK+ 
Sbjct: 8   RFLAAGVFLFIFLSFIKPGRAAAPDIQAESYVLMDFRTGQVLMAKNPHERRPQAITTKIT 67

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +        +  L   +  SKNA+E P S+   ++G T+TL+  L  L+++SAND A
Sbjct: 68  TAILALE-----RGNLNDQVIASKNAAETPESSIYLQEGETLTLEELLYALLLRSANDAA 122

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE +  + + F + MN   + +G   TH++N HG+    HY++A D+A++      +
Sbjct: 123 VAIAEHIGGSVENFARMMNAKVQEIGARDTHYVNPHGLTAPDHYSSAYDLALIGRYAMMN 182

Query: 181 FPQYMHYFQ-IKGLEIKGKKYP----NTN---WAVGTFLGADGMKTGFTCASGFNIVASA 232
                      + +   GK +P    N N   W    + GADG+K G+T  +G  +VASA
Sbjct: 183 PKFREIVATRQRIIPWAGKPWPRLLINENRLLWGYYAYPGADGVKNGYTTPAGQVLVASA 242

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEV 289
            + +  LIAV++ + +     + ++++L  GF N    K +    +      +  ++  +
Sbjct: 243 TRDNWRLIAVVMKSPN---MYRETSAILDYGFNNFHQVKLMPAGQQVALAGVRGGIAANI 299

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           P ++ +     +      T  +  +         +K   +   I
Sbjct: 300 PAVTADDVLVVEPKNETWTWQQRVELNPDLNAPVKKGDRIGRII 343


>gi|207727766|ref|YP_002256160.1| penicillin-binding protein (d-alanyl-d-alanine carboxypeptidase)
           [Ralstonia solanacearum MolK2]
 gi|206591007|emb|CAQ56619.1| penicillin-binding protein (d-alanyl-d-alanine carboxypeptidase)
           [Ralstonia solanacearum MolK2]
          Length = 398

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 15/327 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       + L D  +G V+     D    PASLTKLMTAY+ F  +++ K     
Sbjct: 33  QPVPAPQVTARAWMLTDVTSGQVLGGGNMDERVEPASLTKLMTAYIAFEAVRDGKLKYDQ 92

Query: 79  --PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
               T S    +   S    + G  +++   L+ LIV+S ND A+ +AE++  TE  FV 
Sbjct: 93  LITPTESVRTVKTDESRMFLQAGKPVSVRELLQGLIVQSGNDAALVLAEAVGGTETNFVM 152

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG+  THFMNA G+    HYTTARD++IL+  +  +FPQ   ++  K     
Sbjct: 153 LMNREAERLGMKNTHFMNAAGLPDPNHYTTARDLSILTAALIKNFPQDYKFYSQKEFTYN 212

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDR 249
             K PN N  +      DG KTG T ++G+ +V SA +         + L++VI+G    
Sbjct: 213 NIKQPNRNRLLWLDPTVDGGKTGHTKSAGYCLVTSANRPLPDVPGASRRLLSVIVGTKSD 272

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE--VCTTQKEI 303
             R + S  +L+ G+      +  +        D Y+    N    + +   +   +   
Sbjct: 273 QIRTQESLKVLNYGYQFFDTLRLYDAQQVLQTPDVYKGQAKNVKIGVMDAKWITVPKGMG 332

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLK 330
                 ++      +     + +  +K
Sbjct: 333 GRLKPVLERRDPLIAPIAQGQPLGTVK 359


>gi|238021408|ref|ZP_04601834.1| hypothetical protein GCWU000324_01308 [Kingella oralis ATCC 51147]
 gi|237868388|gb|EEP69394.1| hypothetical protein GCWU000324_01308 [Kingella oralis ATCC 51147]
          Length = 418

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/321 (25%), Positives = 141/321 (43%), Gaps = 7/321 (2%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                         Y + D  +   +     D    PASLTKLMTAY+ F  L+E K   
Sbjct: 56  AAEALKQPEIAATAYLVRDLQSNQTLVAKNTDQQIEPASLTKLMTAYLAFKALEEGKLQP 115

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
              +T+S+ A +   S    K  S + + + ++ LIV S ND A+ +AE +  +E+ F +
Sbjct: 116 EQKLTVSEKAWKVEGSRMFLKAHSEVPVWDLMRGLIVVSGNDAAITLAEGIAGSEEAFAK 175

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD-FPQYMHYFQIKGLEI 195
            MN+ +K LG++ T+F NA G+    H T+  D+AILS  I  D   +Y   +  K    
Sbjct: 176 MMNDEAKRLGMTQTYFENATGLPAPKHLTSVNDLAILSNAIIRDLPAKYYEVYSYKSYTY 235

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 N N  +      DG+KTG T ++G+N++A++ + ++ ++++++GA     R   
Sbjct: 236 NNITQENRNLLLFRDDSVDGLKTGHTSSAGYNLIATSKRNNRRVLSIVIGAASAEARATE 295

Query: 256 SASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTTQKEIINYNTQ 309
           S+ LL+         K             Y+   S       ++  V     +     T 
Sbjct: 296 SSKLLNYALQGFDTPKMYQAGQVVGKVRVYKGASSEAEVGFQQDAYVTLPHGQGERVKTV 355

Query: 310 MKEAKDKESHFIDFEKITLLK 330
           ++  +   +     +K+  LK
Sbjct: 356 LETMQPVVAPVQAGQKLGTLK 376


>gi|220935870|ref|YP_002514769.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997180|gb|ACL73782.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 391

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 96/334 (28%), Positives = 150/334 (44%), Gaps = 15/334 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+     +      +   Y ++D  +G V+AE   D    PASLTKLMTAY+VF  ++  
Sbjct: 22  LAQSTVRVPPPSDLESRNYLIMDHLSGMVLAERAADERVEPASLTKLMTAYLVFQEIERG 81

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              L   + IS+ A        S    +  + + L + L+ LI++S ND +VA+AE +  
Sbjct: 82  TISLDDEVRISERAWRTGMQGASRMFIEVNNRVRLQDLLRGLIIQSGNDASVALAEHVGG 141

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMHYF 188
           TE  FV  MN  ++ LG+  THF N+HG+      YT+ARDMA+L+  +  DFPQ+  Y+
Sbjct: 142 TEGAFVDLMNAQARALGMVNTHFTNSHGLPTEEAQYTSARDMALLASALIRDFPQHYGYY 201

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--A 246
             +     G    N N  +      DG+KTG+T  SG+N+V+S  Q    L+AV++G  A
Sbjct: 202 SERNFTFNGITQSNRNLLLWRDSQVDGLKTGWTRTSGYNLVSSREQEGMRLVAVVMGIDA 261

Query: 247 LDRNT----RNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCT 298
                    R   S +L S GF      +             ++         +SE++  
Sbjct: 262 PSHQQGGIKRANESQALYSWGFRQFETHRLYEAGAALTDARVWKGATDRVPMGLSEDLYV 321

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           T       + Q +   D  S     +   +    
Sbjct: 322 TVPRGRYRDMQAQMELDA-SLEAPVQAGEVYGEV 354


>gi|260881606|ref|ZP_05404816.2| serine-type D-Ala-D-Ala carboxypeptidase [Mitsuokella multacida DSM
           20544]
 gi|260848369|gb|EEX68376.1| serine-type D-Ala-D-Ala carboxypeptidase [Mitsuokella multacida DSM
           20544]
          Length = 399

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 77/341 (22%), Positives = 139/341 (40%), Gaps = 16/341 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           L+ + +++ S      + A    +     L+D +TG V+     +    PAS+TK+MT  
Sbjct: 26  LLAVCLSLSSMTSVRAATAEPDIQAEAAILIDADTGRVLWSKNGEERHYPASMTKMMTCL 85

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +               ITIS+ A+          +G  +T +  ++ +++ S N  AVAI
Sbjct: 86  LGIQ-----LLPPDAKITISQAAASTEDLPLHIARGDVLTSEELMRGMMMVSDNGAAVAI 140

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-P 182
           AE +  +   F + MN  ++ LG+  THF N +G+    HY+T  DMA L+     +   
Sbjct: 141 AEHIDGSAAVFAERMNEKAQELGMVNTHFANPNGLTDPNHYSTPHDMARLAQYAMKNPVF 200

Query: 183 QYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           +     + + +       K     NTN  +G + G  G+KTG+T A+G  + ASA +   
Sbjct: 201 RDFVRQKERRVTWIAPAGKTLLAENTNELLGHYEGITGIKTGWTSAAGGCLAASAERQGV 260

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK--KINYIIKDFYQQNLSNEVPNISE- 294
            LIAV++ A   + R     ++L  GF N T  K        +  + +  +     +   
Sbjct: 261 HLIAVLMKAPSEDARFPEMRAILDYGFANVTLAKGPTAKEASRHVWVKGGTQARTVVRPA 320

Query: 295 -EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            ++          +         +         T + + I 
Sbjct: 321 TDIEYPLLPGEEASHVKVNYDVPKVIDAPLTAGTKVGSAIL 361


>gi|323142851|ref|ZP_08077563.1| D-alanyl-D-alanine carboxypeptidase DacA [Succinatimonas hippei YIT
           12066]
 gi|322417393|gb|EFY08015.1| D-alanyl-D-alanine carboxypeptidase DacA [Succinatimonas hippei YIT
           12066]
          Length = 429

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 92/330 (27%), Positives = 146/330 (44%), Gaps = 8/330 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           ++    L    T     + L+D ++G V+ E+       PASLTK+MT+YV+   +K  +
Sbjct: 56  ASAPLVLPSPPTFDAESWVLMDYHSGQVLFEHNGQKKIWPASLTKMMTSYVIGMEIKAGR 115

Query: 74  AMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                 + I++ A        S    + G T+++D+  K +I++S ND  VA+A  L  +
Sbjct: 116 LKPDDQVMITEEAWSKNYSDSSKMFIEVGDTVSVDSLNKGIIIQSGNDACVAMAIHLAGS 175

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E  FV  MN  +K LGL+ THF N HG+    +Y+TA DMA+L   +  D P+    +  
Sbjct: 176 EAGFVSVMNTYAKQLGLNHTHFSNVHGLFSEDNYSTAYDMALLGRALIRDLPEEYSIYAQ 235

Query: 191 KGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           K     G K  N N       L  DG+KTG     G+N+VASA  G+  LIA ++GA   
Sbjct: 236 KEFTFNGIKQSNRNRLLWDKTLNVDGIKTGHLSQVGYNLVASAPSGNMRLIASVIGAKSE 295

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
           + R      +LS GF                 ++    +  +    ++E+V        +
Sbjct: 296 SQRADFCRQMLSYGFRFFELYTPFKQGQSILKREVRLGDTDSVDLTVNEDVGMMIPRGSS 355

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            N ++    +K        K   L     K
Sbjct: 356 SNIKISYRLNKAVFTAPIAKGDNLGIIEFK 385


>gi|330448017|ref|ZP_08311665.1| penicillin-binding 6 domain protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492208|dbj|GAA06162.1| penicillin-binding 6 domain protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 459

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 85/318 (26%), Positives = 139/318 (43%), Gaps = 6/318 (1%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
               +   + L+D NTG +IA N  +    PAS TKLM  Y+V   L +    L + + +
Sbjct: 98  PPKLEARAFILMDANTGQIIASNDANMRMAPASTTKLMLMYIVEQKLADGVISLDSKVQV 157

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            + A     S    K GS +++   ++ +IV+S ND AV +A  +  ++  FV  MN T+
Sbjct: 158 PEVAWRTGGSRMFLKPGSYVSVKELIQGVIVESGNDAAVTLANYVAGSQSSFVSMMNATA 217

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             LG+  THF    G+    H++TA D+ +L   I  D+PQY H+F  K  E    + PN
Sbjct: 218 VKLGMHNTHFTTVMGLPAPAHFSTAYDLGLLGQHIMNDYPQYFHFFSQKYFEYNHIRQPN 277

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASA--IQGDQSLIAVILGALDRNTRNKVSASLL 260
            N  + T+  A GMKTG T A+G+++V+SA        L+ V+LG    N     S +L 
Sbjct: 278 FNRLLFTYQYATGMKTGSTEAAGYSLVSSAEIPNNPMKLVGVVLGTQSLNDVAAQSKALF 337

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           + GF             K    + +    +     + + +       ++    + + +  
Sbjct: 338 NYGFRFFKQDTLYAADSKLSEQNVWGGKQNTVSLGLDKPLTLVLPSSVDEKDLITKLQID 397

Query: 317 ESHFIDFEKITLLKNKIT 334
                   K   L     
Sbjct: 398 RDIKAPVNKGDKLGEMTV 415


>gi|294083925|ref|YP_003550682.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663497|gb|ADE38598.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 394

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 14/349 (4%)

Query: 1   MRQFL------VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +++ L      V I+ + L+      S   T    +  + D +TG V+ +   D    PA
Sbjct: 2   LKRLLQVTTMSVFISASWLTISNSAGSTEITTPAEFAYITDFDTGKVLFQKNADMQMKPA 61

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+ K+MT ++ F  ++E    L     +S+ A     S S  + GS +T+ + L  +IV+
Sbjct: 62  SMAKIMTIFIAFERIREGGLSLNDKFQVSEKAWRKGGSRSFLEVGSFVTVSDLLNGVIVQ 121

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI-- 172
           S ND A+ IAE +  TE+ F + MN  ++ LG+  T F N+ G       TTA+D+ I  
Sbjct: 122 SGNDAAIVIAEGISGTEESFAEEMNFWAQKLGMENTVFRNSTGWPDPELTTTAKDLNILS 181

Query: 173 ---LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
              +S     ++P     F+ K  E  G   PN N  V   +GADG+KTG T  SG+ +V
Sbjct: 182 SALISRFPIDEYPDLYPMFKKKRFEYNGIDQPNRNPLVYGTVGADGLKTGHTKESGYGVV 241

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
            SAI+  Q ++ V+ G      R+  S  L+ + F      +                ++
Sbjct: 242 GSAIREGQRVVMVLNGMTSMKQRSAESRRLMDLAFREFKQYRFFEANETVDVANVWLGKM 301

Query: 290 PNISEEVCTTQKEIINYNTQ---MKEAKDKESHFIDFEKITLLKNKITK 335
           P++   +      +++ + +          +       K   L     +
Sbjct: 302 PSVDLVLANPLHRVLSRDERRHLKMSVNWVDPVSAPITKGQKLGVLTIE 350


>gi|84685216|ref|ZP_01013115.1| D-alanyl-D-alanine carboxypeptidase family protein [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666948|gb|EAQ13419.1| D-alanyl-D-alanine carboxypeptidase family protein [Rhodobacterales
           bacterium HTCC2654]
          Length = 534

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 101/254 (39%), Positives = 148/254 (58%), Gaps = 1/254 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           ++D  +G V+ E   D   +PASLTK+MT Y+VF  ++  +  L + +TIS+NAS  PPS
Sbjct: 19  VVDARSGQVLHERNADARLHPASLTKMMTLYIVFEAVEHGEISLDSLVTISRNASAEPPS 78

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
              F++GS + L + ++   VKSAND A A+ E++  +E+ F   MN T+K LG++ THF
Sbjct: 79  KIGFREGSQVRLRHLIRAAAVKSANDAATALGEAISGSEEAFAARMNRTAKALGMTRTHF 138

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-GTFL 211
            N HG+   GH +TARDM  L   +  D+PQY + F     ++  K  P+TN     T+ 
Sbjct: 139 ENMHGLTAEGHLSTARDMTTLGRHLFYDYPQYYNLFSRTSADVGVKTVPSTNRRFLTTYE 198

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           GADG+KTG+T ASG N+ ASA +G++ +IA I G     +R+   A LL MGF    +  
Sbjct: 199 GADGIKTGYTRASGSNLTASAHRGNKRIIATIFGGTSGPSRDAQMAELLDMGFRQAGNNV 258

Query: 272 KINYIIKDFYQQNL 285
            +    K  Y  N 
Sbjct: 259 AVRPPSKPPYMGNS 272


>gi|126463103|ref|YP_001044217.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126104767|gb|ABN77445.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 474

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 146/275 (53%), Gaps = 6/275 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ + +AM+      ++           ++D  TG  + E   +   +PASLTK+MT Y+
Sbjct: 12  VLFVFVAMVMAAQSAVAAP-----YAAIVMDARTGETLYETNSETRLHPASLTKMMTLYI 66

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L + +T++KNA+  PPS    K G  + L   ++   VKSAND A AI 
Sbjct: 67  TFQAIQRGEISLDSLVTVTKNAAAEPPSKLGLKSGQRIALRYLIRAAAVKSANDAATAIC 126

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E  F + MN T+K +G++ T F N +G+   GH +TA DM +L  R+  DFPQY
Sbjct: 127 EAVGGSEAAFAERMNRTAKAIGMTKTTFKNCNGLTAEGHLSTAHDMNVLGRRLFFDFPQY 186

Query: 185 MHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +  +       NTN   +  + GADG+KTG+T  +G+N+ ASA +G++ +IA +
Sbjct: 187 YNIFSRRRADAGVTTVANTNTRFLDAYKGADGIKTGYTSPAGYNLTASAQRGNKRIIATV 246

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            G      RN   A LL +GF    +  K+     
Sbjct: 247 FGGKSTAHRNAKMADLLDLGFREAPENAKVRKPAP 281


>gi|77464261|ref|YP_353765.1| penicillin-binding protein [Rhodobacter sphaeroides 2.4.1]
 gi|77388679|gb|ABA79864.1| Probable penicillin-binding protein [Rhodobacter sphaeroides 2.4.1]
          Length = 501

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 146/275 (53%), Gaps = 6/275 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ + +AM+      ++           ++D  TG  + E   +   +PASLTK+MT Y+
Sbjct: 39  VLFVFVAMVMAAQSAVAAP-----YAAIVMDARTGETLYETNSETRLHPASLTKMMTLYI 93

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L + +T++KNA+  PPS    K G  + L   ++   VKSAND A AI 
Sbjct: 94  TFQAIQRGEISLDSLVTVTKNAAAEPPSKLGLKSGQRIALRYLIRAAAVKSANDAATAIC 153

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E  F + MN T+K +G++ T F N +G+   GH +TA DM +L  R+  DFPQY
Sbjct: 154 EAVGGSEAAFAERMNRTAKAIGMTKTTFKNCNGLTAEGHLSTAHDMNVLGRRLFFDFPQY 213

Query: 185 MHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +  +       NTN   +  + GADG+KTG+T  +G+N+ ASA +G++ +IA +
Sbjct: 214 YNIFSRRRADAGVTTVANTNTRFLDAYKGADGIKTGYTSPAGYNLTASAQRGNKRIIATV 273

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            G      RN   A LL +GF    +  K+     
Sbjct: 274 FGGKSTAHRNAKMADLLDLGFREAPENAKVRKPAP 308


>gi|75676866|ref|YP_319287.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           winogradskyi Nb-255]
 gi|74421736|gb|ABA05935.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           winogradskyi Nb-255]
          Length = 455

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 104/322 (32%), Positives = 169/322 (52%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R++L    +     +         +    + L++ +TG V+       PW PAS+TKLMT
Sbjct: 9   RKWLPTCIVLAAVALVTLAPSRTVHATEAHLLIEADTGKVLEAENATFPWYPASVTKLMT 68

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AYV  + +K+K+  L T +T+S  A+   PS   F+ G+ +T+DNALK+++VKSAND+AV
Sbjct: 69  AYVTLTAVKQKRLTLDTLLTVSPTAAAQSPSKMGFRPGTQVTVDNALKMMMVKSANDMAV 128

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +AE +  +   F   MN  ++ LG++ + ++N +G+   G  ++ARDMAIL+     D 
Sbjct: 129 VLAEGVGGSIDGFSAEMNAAAQRLGMTQSSYVNPNGLPADGQISSARDMAILARAFIHDL 188

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P+Y ++  I  +    +   N N  +G F GADG KTGF CASG+N+VASA Q  + LIA
Sbjct: 189 PEYEYFVHIPSIRYGRRVTHNFNKLIGRFPGADGFKTGFICASGYNLVASATQNGKRLIA 248

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V+LGA     R   +A +L  GF N +       +        ++   PN+ +E+C  ++
Sbjct: 249 VVLGASSGTMRAVRAAQMLERGFANNSLSWLRPALGTVDRLAPIAATPPNLRDEMCGPKR 308

Query: 302 EIINYNTQMKEAKDKESHFIDF 323
                +       +  +     
Sbjct: 309 RHPASDEDNDVVANTSATSAAV 330


>gi|83855085|ref|ZP_00948615.1| D-alanyl-D-alanine carboxypeptidase family protein [Sulfitobacter
           sp. NAS-14.1]
 gi|83842928|gb|EAP82095.1| D-alanyl-D-alanine carboxypeptidase family protein [Sulfitobacter
           sp. NAS-14.1]
          Length = 473

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 3/312 (0%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  TG V+     D   +PASLTK+MT Y+ F  +K  +  L + + I+ +
Sbjct: 2   AAPYAAYVIDARTGEVLHSRNADTRLHPASLTKMMTLYIAFEAIKRGEISLDSKVKITSH 61

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+  PPS    K G T+ L   ++   VKSAND A AI E++  +E KF + MN T+K L
Sbjct: 62  AASEPPSKLGLKSGQTIALRYLIRAAAVKSANDAATAIGEAIEGSEAKFARRMNRTAKAL 121

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G++ T F NAHG+ + GH +TA DM I+   +  D P+Y + F     +   +K  +TN 
Sbjct: 122 GMTNTTFKNAHGLTESGHMSTAHDMTIMGRHLLYDHPEYYNLFSRITADAGVRKVSHTNR 181

Query: 206 AV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
               ++ GADG+KTG+T A+GFN+ ASA +G++ +I  + G    + RN   A L+ +GF
Sbjct: 182 RFLSSYKGADGIKTGYTRAAGFNLTASAERGNERIIVTVFGGTSTSARNAKVAELMDLGF 241

Query: 265 YNKTDRKKINYIIKDFY--QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
                   +    K  Y   ++        + +V      +            +    + 
Sbjct: 242 RRAPSSAPLKKPSKPAYADVEDTPVASDGAAGKVIRLVGAVTTSKRPTLRPGHQPQVVVA 301

Query: 323 FEKITLLKNKIT 334
             ++    + I 
Sbjct: 302 TAEVPQATSPIL 313


>gi|241766088|ref|ZP_04764001.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidovorax delafieldii
           2AN]
 gi|241363892|gb|EER59198.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidovorax delafieldii
           2AN]
          Length = 406

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 11/326 (3%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        Y L+D     ++A    D P   ASLTKLMT Y+VF  L+ KK  L 
Sbjct: 43  AQAPQPPEIAARTYMLVDVTANQILAAKDIDAPVEQASLTKLMTGYLVFDALRAKKITLE 102

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             + +S  A + P S         + +D+ LK +IV+S ND  +A+AE +  T + FV+ 
Sbjct: 103 QKLPVSVRAWKMPGSRMFIDPKMQVAVDDLLKGMIVQSGNDATMALAEGVGGTAENFVKL 162

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN+ ++ LG+  T + N  G+ + GH TTARD+A L+ R+  DFP+YMHY+  K     G
Sbjct: 163 MNDQAQALGMKNTAYKNPEGLTEPGHTTTARDLATLASRLMKDFPEYMHYYSTKQYSYPG 222

Query: 198 KKY---PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-----DQSLIAVILGALDR 249
                  N N  +      DG+KTG T A+G+ +VA++ +       + L++++LGA   
Sbjct: 223 TPASNGNNRNMLLFRDPTVDGLKTGHTAAAGYCLVATSKRDFPNVGQRRLLSIVLGAASE 282

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINY 306
           N R   S  LL+ G+      K  +           +   + +     E         + 
Sbjct: 283 NARANESQKLLNWGYTAFDAVKLFDAGQPVATPAVWKGKESTIRIGRSEPIVVTVPAGSA 342

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNK 332
                +   ++     + K   + + 
Sbjct: 343 GKVTSQIVRQDPLVAPYTKGQAIGSL 368


>gi|238751821|ref|ZP_04613308.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia rohdei ATCC
           43380]
 gi|238709950|gb|EEQ02181.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia rohdei ATCC
           43380]
          Length = 401

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 93/319 (29%), Positives = 147/319 (46%), Gaps = 11/319 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           + +   Y L+D N+G V+ E   D   +PASLTK+M++YV+   +K  K      +T+ K
Sbjct: 37  SIEAKAYVLMDYNSGKVLTEGNSDQRLDPASLTKIMSSYVIGQAIKAGKVHPDDLVTVGK 96

Query: 85  NASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +A                K G  + L +  K ++++S ND ++A+A+ +  ++  FV  M
Sbjct: 97  DAWATGNPALRGSSLMFLKPGDQVKLSDLNKGIVIQSGNDASIALADYIAGSQDSFVGLM 156

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           NN +K LGL  THFM  HG+   G Y+TARDMA+L   +  D P+     + K       
Sbjct: 157 NNYAKALGLDNTHFMTVHGLDAPGQYSTARDMAVLGQALIRDVPEEYALHKEKEFTFNKI 216

Query: 199 KYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +  N N     T +  DGMKTGFT  +G N+VASA  G   LI+V+LGA     R   S 
Sbjct: 217 RQINRNRLLWSTNINVDGMKTGFTTGAGHNLVASATDGPMRLISVVLGAPSDRVRFSESE 276

Query: 258 SLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
            LL+ GF        I      + +  +  +       ++++   T  +    N +    
Sbjct: 277 KLLTWGFRFYETVVPIKAANPFVTQKVWFGDTGQVELGVAQDAAVTIPKGQMKNLKASYK 336

Query: 314 KDKESHFIDFEKITLLKNK 332
            D+        K  ++   
Sbjct: 337 LDQTELRAPLAKHQVVGTI 355


>gi|330994628|ref|ZP_08318551.1| D-alanyl-D-alanine carboxypeptidase dacC [Gluconacetobacter sp.
           SXCC-1]
 gi|329758269|gb|EGG74790.1| D-alanyl-D-alanine carboxypeptidase dacC [Gluconacetobacter sp.
           SXCC-1]
          Length = 428

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 85/323 (26%), Positives = 136/323 (42%), Gaps = 4/323 (1%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                L         +  ++D  TG V+ E   D    P+SLTK+MTAY+VF  L+  + 
Sbjct: 69  TPANSLIGPIDTLARWACIVDYTTGAVLLEKAADERMPPSSLTKMMTAYIVFGMLRAGRL 128

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   + +S+ A     S        T+ + + ++ ++++S ND  + +AE +  +E++F
Sbjct: 129 TLEQTLPVSEKAWRMQGSKMFVPLNGTVAVSDLIQGMVIQSGNDACIVLAEGIAGSEEQF 188

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  +  LG+S +HF+NA G    GHY +ARD+A ++  +  DFP Y H+F  K   
Sbjct: 189 VGLMNAKAAELGMSNSHFLNATGWPMDGHYMSARDVATIAMHLIHDFPDYYHFFSEKSFR 248

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
                  N N  V   + ADG+KTG T A GF + ASA +G   ++  I G    N R +
Sbjct: 249 YNKISQENRNVLVVRGV-ADGLKTGHTDAGGFGLCASAERGGNRVVMAINGLPSSNARAQ 307

Query: 255 VSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
               L    F N  +   ++              +  VP ++    T        N    
Sbjct: 308 EGERLFEWSFVNFENATLVHNGAVVDNVPVWLGQAATVPLVATRDITLTLPHGWQNRVHV 367

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
                            L   + 
Sbjct: 368 SVDYTSPVPAPVAAGQQLGEMVI 390


>gi|221640145|ref|YP_002526407.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           KD131]
 gi|221160926|gb|ACM01906.1| Serine-type D-Ala-D-Ala carboxypeptidase precursor [Rhodobacter
           sphaeroides KD131]
          Length = 463

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 146/275 (53%), Gaps = 6/275 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ + +AM+      ++           ++D  TG  + E   +   +PASLTK+MT Y+
Sbjct: 1   MLFVFVAMVMAAHSAVAAP-----YAAIVMDARTGETLYETNSETRLHPASLTKMMTLYI 55

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L + +T++KNA+  PPS    K G  + L   ++   VKSAND A AI 
Sbjct: 56  TFQAIQRGEISLDSLVTVTKNAAAEPPSKLGLKSGQRIALRYLIRAAAVKSANDAATAIC 115

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E  F + MN T+K +G++ T F N +G+   GH +TA DM +L  R+  DFPQY
Sbjct: 116 EAVGGSEAAFAERMNRTAKAIGMTKTTFKNCNGLTAEGHLSTAHDMNVLGRRLFFDFPQY 175

Query: 185 MHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +  +       NTN   +  + GADG+KTG+T  +G+N+ ASA +G++ +IA +
Sbjct: 176 YNIFSRRRADAGVTTVANTNTRFLDAYKGADGIKTGYTSPAGYNLTASAQRGNKRIIATV 235

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            G      RN   A LL +GF    +  K+     
Sbjct: 236 FGGKSTAHRNAKMADLLDLGFREAPENAKVRKPAP 270


>gi|83952372|ref|ZP_00961103.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius
           nubinhibens ISM]
 gi|83836045|gb|EAP75343.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius
           nubinhibens ISM]
          Length = 491

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 145/258 (56%), Gaps = 1/258 (0%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  +G V+     D   +PASLTK+MT YVVF  ++  +  L   ITIS++A+  PP
Sbjct: 17  MVIDARSGEVLHSRNADSRLHPASLTKMMTLYVVFEAVENGEISLDDTITISRHAASEPP 76

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    + G  + L   ++   VKSAND A A+ E++  +E +F + M  T+K LG++ T 
Sbjct: 77  SKLGLRAGQKIKLRYLIRAAAVKSANDAATALGEAIEGSEARFARRMTRTAKALGMTRTT 136

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA-VGTF 210
           F NAHG+ + GH +TARDM  L   +  DFP+Y + F     +   +   NTN   +  +
Sbjct: 137 FKNAHGLTEDGHLSTARDMTTLGRHLFYDFPEYYNLFSRVETDAGVRSVSNTNRRLLSAY 196

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
            GADG+KTG+T A+GFN+VASA +G++ +IA + G    ++RN   A LL +GF     R
Sbjct: 197 KGADGIKTGYTRAAGFNLVASAERGNERIIATVFGGRSSHSRNAEVAELLDLGFARAPRR 256

Query: 271 KKINYIIKDFYQQNLSNE 288
             +N   +  Y   +   
Sbjct: 257 VAVNKPARPPYYGKIGGS 274


>gi|238791637|ref|ZP_04635275.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia intermedia ATCC
           29909]
 gi|238729253|gb|EEQ20769.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia intermedia ATCC
           29909]
          Length = 403

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 11/328 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 32  VNLKTMIPGVPQIDSEAYVLIDYNSGKVLAEMNADARRNPASLTKMMTSYVIGQAIKAGK 91

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 92  IGPEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 151

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  T F   HG+   G Y++ARDMA++   +  D P     
Sbjct: 152 AGSQDSFVNLMNNYVKALGLQNTQFKTVHGLDAEGQYSSARDMALIGQALIRDVPDEYAI 211

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+ +LG 
Sbjct: 212 YKEKEFTFNNIRQMNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISAVLGG 271

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
                R   S  LL+ GF        +        +  +  +       + ++   T   
Sbjct: 272 HTYKGRETESKKLLTWGFRFFETVAPLKVGKEFASEPVWFGDSDRVQLGVDKDAYLTIPR 331

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
               + +     +         K  ++ 
Sbjct: 332 GRMKDLKASYVLNTPEIHAPLAKNQVVG 359


>gi|327394408|dbj|BAK11830.1| penicillin-binding protein 6B precursor DacD [Pantoea ananatis
           AJ13355]
          Length = 364

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 89/327 (27%), Positives = 140/327 (42%), Gaps = 11/327 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            PF           + L+D  TG V+    PD   NPASLTKLMT YVV   + +KK   
Sbjct: 1   MPFPVTPPAIDAASWVLMDATTGQVLTAGNPDERRNPASLTKLMTGYVVDRAIDQKKITR 60

Query: 77  TTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
              +T+ K+A                K G  +++ +  + +I+ S ND  VA+A+ +  +
Sbjct: 61  DDMVTVGKDAWAAGNPVFKGSSLMFLKPGDKLSVRDLSRGVIIDSGNDACVALADYVAGS 120

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           +  FV+ MN+  + LGL+ THF   HG+   G +++A DMA LS  I    P +   ++ 
Sbjct: 121 QDNFVKLMNHYVEKLGLTNTHFETVHGLDAPGQFSSALDMAKLSRAIIDGEPDFYAMYRE 180

Query: 191 KGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           K L   G    N N  +       DG+KTG T  +GFNI+AS + G   LIAV++G    
Sbjct: 181 KTLTWNGITQNNRNGLLWDNSLHVDGLKTGHTETAGFNIIASNVVGQHRLIAVVMGGKSA 240

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIIN 305
             R + +  LL  G       +  +   K      +  N        + +V  +      
Sbjct: 241 KGREEQARKLLVWGQNTFDTVQLFHAGKKIGSEHVWYGNPHQVEVGTANDVYLSLPRSEI 300

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNK 332
            N + K   ++       +    +   
Sbjct: 301 PNVKAKYVINRSDLEAPLKANENIGEI 327


>gi|297617565|ref|YP_003702724.1| serine-type D-Ala-D-Ala carboxypeptidase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145402|gb|ADI02159.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 427

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/340 (23%), Positives = 144/340 (42%), Gaps = 15/340 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +++I + +     P L++A      + P   L++  TG ++    PD    PASLTK++T
Sbjct: 30  VLLICLVLSLGFDPKLALASENPQVQAPSCVLMEATTGKIVWAKNPDQRMAPASLTKVLT 89

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A +        +  L   I +  N      +     +G   TL+N L  +++ S ND A+
Sbjct: 90  ALIALE-----RGDLNDKIKVGPNPPRVEGTRVYLVEGEEATLENLLYAMLLNSGNDAAL 144

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AIAE    +++ F + MN  +  LG   +HF++ +G+    HYTT+RD+A+++     + 
Sbjct: 145 AIAEHFGGSQQGFARLMNEKAAALGARNSHFVSPNGLSDPNHYTTSRDLAVIARAALQNP 204

Query: 182 PQYMHYFQIKGLEIKGKKYP---NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                                  N N  +  + GADG+KTG+T  +   ++ASA +  QS
Sbjct: 205 DFRKIVATKTRPWNGQDWQTTLINQNKLLWKYPGADGVKTGYTTEARNTLIASATRNGQS 264

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI--SEEV 296
            IAV+L     +   + + +LL  GF +    +           Q   N+  ++  + ++
Sbjct: 265 FIAVVLDEPRGSVAEQDAIALLDYGFSHFQCLRLAKKNQLVSVLQVEKNKKIDLVAARDL 324

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                     N   +   +       F   T +   I K+
Sbjct: 325 TIVVSTGTKSNPVGELHLNSVHG--PFPSGTQVGEMIFKE 362


>gi|226309602|ref|YP_002769496.1| D-alanyl-D-alanine carboxypeptidase precursor [Brevibacillus brevis
           NBRC 100599]
 gi|226092550|dbj|BAH40992.1| D-alanyl-D-alanine carboxypeptidase precursor [Brevibacillus brevis
           NBRC 100599]
          Length = 438

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/355 (22%), Positives = 140/355 (39%), Gaps = 37/355 (10%)

Query: 16  IFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
             P  S A    +     L++ +TG V+    PD    PAS++K+MT Y+V   +K+KK 
Sbjct: 33  AAPVASQANLQLEAKSAILVEASTGKVLYSKDPDVALPPASMSKMMTEYLVHDAIKQKKM 92

Query: 75  MLTTPITISKNASEYPPSNS----TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                + +S+ A      +         G + T+    + + + SAND  V +AE +  +
Sbjct: 93  KWDDVVPVSEYAFYIAKISDSSGVYLNLGESFTVKQLYEAMAIVSANDATVLLAEHIAGS 152

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQH------------GHYTTARDMAILSWRIK 178
           E  FV+ MN  +  LG+  T F+ + G+                +  +ARD AIL+  + 
Sbjct: 153 EAAFVELMNKKAAELGMKNTSFVTSTGLPADELGPYSVQTDQKENLMSARDSAILARALI 212

Query: 179 TDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIV 229
            DFP  +   +                 N NW     +  + G DG+KTG T A+GF   
Sbjct: 213 HDFPDALETSKKPIFTFRTGTPNEWTKKNYNWMLPSLISYYPGVDGLKTGHTDAAGFCFT 272

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
            +A++ +  LI+V++ A   + R   +  L   GF N    K    + K+   +      
Sbjct: 273 GTAVRDNMRLISVVMKASTESKRFAETRKLFDYGFGNF---KLTKQMDKNVPVKGFETAP 329

Query: 290 PNISEEVCTTQKEIINYNTQMKE-AKDKESH-------FIDFEKITLLKNKITKK 336
                EV          N   K   + K +            ++  ++   + K+
Sbjct: 330 VKNGVEVTVPVVTGSEVNMITKTGTEAKYTPTVTFQELTAPIQQGQVVGKIVLKE 384


>gi|126732363|ref|ZP_01748163.1| D-alanyl-D-alanine carboxypeptidase family protein [Sagittula
           stellata E-37]
 gi|126707232|gb|EBA06298.1| D-alanyl-D-alanine carboxypeptidase family protein [Sagittula
           stellata E-37]
          Length = 479

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 1/295 (0%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              L +A         ++D  TG V+     D   +PASLTK+MT Y+VF  ++  +  +
Sbjct: 1   MALLPMAVKAAPYAAMVMDARTGKVLHAQNADTRLHPASLTKMMTLYIVFEAVQNGELTM 60

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T +T+SKNA+  PPS    ++G  + L   ++   VKSAND A AI E++  +E  F +
Sbjct: 61  DTLVTVSKNAAAEPPSKLGLREGQKIKLRYLVRAAAVKSANDAATAIGEAVEGSEAAFAR 120

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN T+K +G++ T F NAHG+   GH +TARDM IL   +  D+P+Y + F     +  
Sbjct: 121 RMNRTAKAIGMTRTTFKNAHGLTAEGHLSTARDMTILGRHVIYDYPEYYNLFSRVTADAG 180

Query: 197 GKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
            +   +TN   + ++ GADG+KTG+T A+GFN+VASA +G + +IA + G     +RN  
Sbjct: 181 VRTVSHTNRRLLQSYKGADGIKTGYTRAAGFNLVASAERGRERVIATVFGGQSTASRNAK 240

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            A LL +GF     R       K  Y    +     +              + ++
Sbjct: 241 VAELLDLGFRESPTRVAFLAPGKPPYLGRGAGSGGIVVANTSDPAPGTRAKSIRV 295


>gi|332559150|ref|ZP_08413472.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           WS8N]
 gi|332276862|gb|EGJ22177.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           WS8N]
          Length = 463

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 146/275 (53%), Gaps = 6/275 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ + +AM+      ++           ++D  TG  + E   +   +PASLTK+MT Y+
Sbjct: 1   MLFVFVAMVMAAQSAVAAP-----YAAIVMDARTGETLYETNSETRLHPASLTKMMTLYI 55

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L + +T++KNA+  PPS    K G  + L   ++   VKSAND A AI 
Sbjct: 56  TFQAIQRGEISLDSLVTVTKNAAAEPPSKLGLKSGQRIALRYLIRAAAVKSANDAATAIC 115

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  +E  F + MN T+K +G++ T F N +G+   GH +TA DM +L  R+  DFPQY
Sbjct: 116 EAVGGSEAAFAERMNRTAKAIGMTKTTFKNCNGLTAEGHLSTAHDMNVLGRRLFFDFPQY 175

Query: 185 MHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +  +       NTN   +  + GADG+KTG+T  +G+N+ ASA +G++ +IA +
Sbjct: 176 YNIFSRRRADAGVTTVANTNTRFLDAYKGADGIKTGYTSPAGYNLTASAQRGNKRIIATV 235

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            G      RN   A LL +GF    +  K+     
Sbjct: 236 FGGKSTAHRNAKMADLLDLGFREAPENAKVRKPAP 270


>gi|223928102|gb|ACN23817.1| D-alanyl-D-alanine carboxypeptidase [Clostridium sp. enrichment
           culture clone 7-14]
          Length = 455

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/369 (21%), Positives = 141/369 (38%), Gaps = 37/369 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA----------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           +++F     M +       + +A             +     L+D  TG ++      + 
Sbjct: 3   IKRFFAAFLMLLTVVSLSAVPVAADDAVTPVPDPNIQAKAAVLIDAETGTMLYGKNEHNE 62

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNA 107
             PASLTK+MTA +    + + K  L   IT S    N      S++  K G TMT++N 
Sbjct: 63  LYPASLTKIMTALLTLEAVDQGKLSLDQEITASASALNGLAADGSSAGIKVGETMTVENY 122

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK +++ SAN+    +AE++  +   FV  MN  +K LG   THF+N +G+    HYT+A
Sbjct: 123 LKCMLIVSANEACDVLAEAVSGSVSAFVDAMNAKAKELGCQNTHFVNPNGLHDSQHYTSA 182

Query: 168 RDMAILSWRIKTDFPQYMHYFQ------------IKGLEIKGKKYPNTNWAVGTFLGADG 215
            D+ +++                            + L        N       +  A G
Sbjct: 183 WDLYLITAEALKYPEFMSICDMGVAEIPASNLSETRRLHTTNYLLSNWRANGYLYSDAHG 242

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGAL--------DRNTRNKVSASLLSMGFYNK 267
           +KTG T  +G  +V+SA +G ++LI+V+LGA                 +  L   GF N 
Sbjct: 243 IKTGSTSEAGHCLVSSATKGSRTLISVVLGAERIVGADGVADVQSFSETKRLFLWGFENF 302

Query: 268 TDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
           + +  ++ +            + +   + +  V       +      ++    E+     
Sbjct: 303 STKTVLSELDMLADVPVTLSKIDSVAVHPASAVDLILPNDVKPEELEQKLVLPENVKAPV 362

Query: 324 EKITLLKNK 332
                L + 
Sbjct: 363 TAGQELGSV 371


>gi|149203254|ref|ZP_01880224.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius sp.
           TM1035]
 gi|149143087|gb|EDM31126.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius sp.
           TM1035]
          Length = 465

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 8/315 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++      ++           ++D   G V+  N  D   +PASLTK+MT YVVF  ++ 
Sbjct: 2   LVIVPLSAVAAP-----YAALVMDARNGEVLYSNNADTRLHPASLTKMMTLYVVFEAIEN 56

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L   + ISK+A+  PPS    + GS++ L   ++   VKSAND A A+ E++  +E
Sbjct: 57  GEIGLDDKVVISKHAASEPPSKLGVRAGSSIALRYLIRAAAVKSANDAATALGEAIEGSE 116

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            +F + MN T++ LG++ T F NAHG+ ++GH +TARDM IL   +  DFPQY + F   
Sbjct: 117 AQFARRMNRTAEALGMTRTTFKNAHGLTENGHLSTARDMTILGRHLFYDFPQYYNLFSRI 176

Query: 192 GLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
             +       +TN   +  + GADG+KTG+T A+GFN+ ASA +  + +IA + G     
Sbjct: 177 TTDAGVTSVSHTNRRLLEAYRGADGIKTGYTRAAGFNLTASAERNGERIIATVFGGQSTA 236

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS--EEVCTTQKEIINYNT 308
           +RN   A LL +GF     +  ++   +  Y   L      I+  E+  +   + +   T
Sbjct: 237 SRNAKVAELLDLGFNKAPTQVAVHRPARPPYLGKLGTAPVMIAAGEDRPSVAAKTVRLTT 296

Query: 309 QMKEAKDKESHFIDF 323
                K         
Sbjct: 297 AAAVVKSLRPQSRPL 311


>gi|293396914|ref|ZP_06641188.1| D-alanyl-D-alanine carboxypeptidase DacA [Serratia odorifera DSM
           4582]
 gi|291420385|gb|EFE93640.1| D-alanyl-D-alanine carboxypeptidase DacA [Serratia odorifera DSM
           4582]
          Length = 356

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 89/310 (28%), Positives = 148/310 (47%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D N+G ++AE  PD   +PASLTK+M++YV+   +K  K   T  +T+ K+A       
Sbjct: 1   MDYNSGKILAEGNPDSRLDPASLTKIMSSYVIGQAIKAGKIKPTDLVTVGKDAWATGNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K G  + +    K ++++S ND ++A+A+ +  +++ FV  MN  +K+LGL
Sbjct: 61  LRGSSLMFIKPGDRVPVMELNKGIVIQSGNDASIALADYVAGSQESFVSLMNGYAKHLGL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA- 206
             THF+  HG+   G ++TARDMA+LS  +  D P      + K       +  N N   
Sbjct: 121 QNTHFLTVHGLDAEGQFSTARDMALLSQALIRDVPDEYALHKEKEFTFNKIRQVNRNRLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             + L  DG+KTG+T  +G N+VASA  G   LI+V+LGA     R   S  LL+ GF  
Sbjct: 181 WSSNLSVDGIKTGYTSGAGHNLVASATDGPMRLISVVLGAPSDRVRFSESEKLLTWGFRF 240

Query: 267 KTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
                 I      I +  +  ++      ++++   T  +    N +     + +S    
Sbjct: 241 YETTTPIKADKPFITQRVWFGDVGEVPLGVAKDASITIPKGQMKNLKASYKLNSDSLKAP 300

Query: 323 FEKITLLKNK 332
             K  ++   
Sbjct: 301 LAKNQVVGTI 310


>gi|83746894|ref|ZP_00943941.1| D-alanyl-D-alanine carboxypeptidase [Ralstonia solanacearum UW551]
 gi|207742170|ref|YP_002258562.1| penicillin-binding protein (d-alanyl-d-alanine carboxypeptidase)
           [Ralstonia solanacearum IPO1609]
 gi|83726479|gb|EAP73610.1| D-alanyl-D-alanine carboxypeptidase [Ralstonia solanacearum UW551]
 gi|206593558|emb|CAQ60485.1| penicillin-binding protein (d-alanyl-d-alanine carboxypeptidase)
           [Ralstonia solanacearum IPO1609]
          Length = 398

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/327 (26%), Positives = 144/327 (44%), Gaps = 15/327 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       + L D  +G V+     D    PASLTKLMTAY+ F  +++ K     
Sbjct: 33  QPVPAPQVTARAWMLTDVTSGQVLGGGNMDERVEPASLTKLMTAYIAFEAVRDGKLKYDQ 92

Query: 79  --PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
               T S    +   S    + G  +++   L+ LIV+S ND A+ +AE++  TE  FV 
Sbjct: 93  LITPTESVRTVKTDESRMFLQAGKPVSVRELLQGLIVQSGNDAALVLAEAVGGTETNFVM 152

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG+  THFMNA G+    HYTTARD++IL+  +  +FPQ   ++  K     
Sbjct: 153 LMNREAERLGMKNTHFMNAAGLPDPNHYTTARDLSILTAALIKNFPQDYKFYSQKEFTYN 212

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDR 249
             K PN N  +      DG KTG T ++G+ +V SA +         + L++VI+G    
Sbjct: 213 NIKQPNRNRLLWLDPTVDGGKTGHTKSAGYCLVTSANRPLPDVPGASRRLLSVIVGTKSD 272

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE--VCTTQKEI 303
             R + S  +L+ G+      +  +        D Y+    N    + +   +   +   
Sbjct: 273 QIRTQESLKVLNYGYQFFDTLRLYDAQQVLQTPDVYKGQAKNVKIGVMDAKWITVPKGMG 332

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLK 330
            +    ++      +     + +  +K
Sbjct: 333 GHLKPVLERKDPLIAPIAQGQPLGTVK 359


>gi|90578192|ref|ZP_01234003.1| D-alanyl-D-alanine carboxypeptidase [Vibrio angustum S14]
 gi|90441278|gb|EAS66458.1| D-alanyl-D-alanine carboxypeptidase [Vibrio angustum S14]
          Length = 459

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 6/318 (1%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             +     + L+D NTG +IA N  +    PAS TKLM  Y+V   L +    L + + +
Sbjct: 98  PPSLNARAFILIDANTGQIIASNNANMRMAPASTTKLMLMYIVEQKLADGVISLDSKVLV 157

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            + A     S    K GS +++ + ++ +IV+S ND AV +A  +  ++  FV  MN T+
Sbjct: 158 PEVAWRTGGSRMFLKPGSYVSVKDLIQGVIVESGNDAAVTLANYVAGSQSSFVSMMNATA 217

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             LG+  THF    G+    H++TA D+ +L   I  D+PQY H+F  K  E    + PN
Sbjct: 218 VKLGMHNTHFTTVMGLPAPAHFSTAYDLGLLGEHIMNDYPQYFHFFSQKYFEYNHIRQPN 277

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQ--GDQSLIAVILGALDRNTRNKVSASLL 260
            N  + T+  A GMKTG T A+G+++V+SA       +L+AV+LG    N     S  L 
Sbjct: 278 FNRLLFTYQYATGMKTGSTEAAGYSLVSSAKMPDNPMNLVAVVLGTQSLNDVAAQSKGLF 337

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           + GF             K      +     N    + + +       ++    +   +  
Sbjct: 338 NYGFRFFKQDTLYKADSKLSEQHVWGGQQDNVSLGLEKPLTLVLPSSVDEKDLLTNLQFD 397

Query: 317 ESHFIDFEKITLLKNKIT 334
                  +K   L     
Sbjct: 398 HDIKAPVDKGEKLGEMTV 415


>gi|58038510|ref|YP_190474.1| D-alanyl-D-alanine carboxypeptidase [Gluconobacter oxydans 621H]
 gi|58000924|gb|AAW59818.1| D-alanyl-D-alanine carboxypeptidase [Gluconobacter oxydans 621H]
          Length = 424

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 82/325 (25%), Positives = 136/325 (41%), Gaps = 4/325 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +                +  ++D +TG V+ +   D    P+SLTK+MTAY+VF  L   
Sbjct: 64  VGTPANTPIGPFDTVARWAYVVDYDTGAVLLDKASDERMAPSSLTKMMTAYIVFGMLATG 123

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L   + +S+ A     S      G ++ + + ++ ++++S ND  + +AE +  +E+
Sbjct: 124 RIRLEQSLPVSEKAWRTQGSKMFVPLGQSVLVSDLIQGMLIQSGNDACIVLAEGIAGSEE 183

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +FV  MN  +  LG+  +HF+N  G+   GHY TARD+A ++  +  DFPQY HYF    
Sbjct: 184 RFVAMMNEEAPKLGMMNSHFVNVTGLPADGHYMTARDVATVASHLIRDFPQYYHYFGELE 243

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                 +  N N  V   L ADG+KTG T A GF + AS+ +    +I VI G+   N R
Sbjct: 244 FTYNHIRQGNRNVLVDKGL-ADGLKTGHTEAGGFGLCASSQRNGNRVIVVINGSSSSNER 302

Query: 253 NKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
                 L+S  F N  +                     +V  ++         +      
Sbjct: 303 AHEGERLMSWAFANFENATLFRRGQVVDSAPVWMGEHRQVSLVAGADIVMTLPVGWQQRS 362

Query: 310 MKEAKDKESHFIDFEKITLLKNKIT 334
                          K  +    + 
Sbjct: 363 HIGVDYASPVIAPVTKGQVCGALVI 387


>gi|86136162|ref|ZP_01054741.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. MED193]
 gi|85827036|gb|EAQ47232.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. MED193]
          Length = 391

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 81/344 (23%), Positives = 139/344 (40%), Gaps = 16/344 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +  +I    +     P    A   +     +LD  T  V+     + P  PAS++KLMT 
Sbjct: 7   KLALIGGFGLCLTALPL--AAYDTRARAAFVLDQGTDTVLLSKNAEVPLPPASMSKLMTL 64

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YV F  L++ +  L   + +S +A  Y  S         + +++ L+ +IV S ND    
Sbjct: 65  YVAFEALRDGRLSLDERLPVSAHAMSYGGSTMFLDTTDRVRVEDLLRGIIVLSGNDACAV 124

Query: 123 IAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           IAE+L     E  F ++M   +  LG+    F N++G    GH  + RD+ +L+  +  D
Sbjct: 125 IAEALSPDGTEAGFARYMTKRAHELGMMNASFANSNGWPAIGHRMSMRDLGVLAEHLIED 184

Query: 181 FPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           FPQY   F  K             N N  +G  +GADG+KTG T  +G+ +V SA+QGD+
Sbjct: 185 FPQYYPLFSEKSFAFDGRAPSNTRNRNPLLGLGIGADGLKTGHTSEAGYGLVGSAVQGDR 244

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPN 291
            +I V+ G      R + + ++++  F     +      +     +           +P 
Sbjct: 245 RVIFVVTGLESNKARAEEAEAIVNWSFRQFAKKTVAKAGVSVASAEIWRGAERSVGLMPE 304

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              E+            ++              K   L   + +
Sbjct: 305 TDLEILLPALAGSEIEAEVVY---SGPIDAPVTKGQRLAELVVQ 345


>gi|254487632|ref|ZP_05100837.1| D-alanyl-D-alanine carboxypeptidase protein [Roseobacter sp.
           GAI101]
 gi|214044501|gb|EEB85139.1| D-alanyl-D-alanine carboxypeptidase protein [Roseobacter sp.
           GAI101]
          Length = 470

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 9/318 (2%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  ++A         ++D  +G V+     +   +PASLTK+MT Y+ F  +K  +  
Sbjct: 2   VLPLSALAAP---YAAYVIDARSGEVLHSRNAETRLHPASLTKMMTLYIAFEAIKRGEIS 58

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L + + IS +A+  PPS    K G T+ L   ++   VKSAND A AI E++  +E KF 
Sbjct: 59  LDSQVKISSHAASEPPSKLGLKSGQTIALRYLIRAAAVKSANDAATAIGEAIEGSEAKFA 118

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + MN T+K LG++ T F NAHG+ + GH +TARDM ++   +  DFP+Y + F     + 
Sbjct: 119 RRMNRTAKALGMTKTTFKNAHGLTEAGHMSTARDMTMMGRHLLYDFPEYYNLFSRITADA 178

Query: 196 KGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
             +K  +TN     ++ GADG+KTG+T A+GFN+VASA +G++ +I  + G    + RN 
Sbjct: 179 GVRKVSHTNRRFLSSYKGADGIKTGYTRAAGFNLVASAERGNERVIVTVFGGTSTSARNA 238

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV-----PNISEEVCTTQKEIINYNTQ 309
             A L+ +GF     +  +    K  Y       V        + +       +      
Sbjct: 239 KVAELMDLGFRRAPSKAPLQKPAKPVYADVEDVVVASGTTAGAAGKTIRLIGAVTTSKRP 298

Query: 310 MKEAKDKESHFIDFEKIT 327
           +     +    +   ++T
Sbjct: 299 VLRPVSEAPVVVTVAQVT 316


>gi|297170270|gb|ADI21307.1| D-alanyl-D-alanine carboxypeptidase [uncultured gamma
           proteobacterium HF0010_09F21]
          Length = 381

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 17/351 (4%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+QF  +++    ++     +       +  Y L +  T  VIA    +     ASLTKL
Sbjct: 1   MKQFSFLLLISLSINLFSSPIPKPPDLGVGSYILYEPTTDTVIASFNENESVEVASLTKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT+YVV   +K+    +    TIS  A + P S    ++G+ + + + +K +++ S ND 
Sbjct: 61  MTSYVVADQIKQGYISMEDEPTISVKAWQTPGSQMFIREGTKVKVSDLVKGMVIISGNDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           +VA+AE +  +E+ FV  M+  + +LGL  + F N+ G+    + ++A D+A L+  I  
Sbjct: 121 SVALAEHIAGSEENFVYLMDQYAVDLGLRNSDFNNSSGLPDPNNVSSALDLAKLTGAIIR 180

Query: 180 DFPQYMHYFQIKGLEIKGK-----KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
           DFP +   ++ K              PN N  +      DG+KTG+T A+G  +V S+ +
Sbjct: 181 DFPDHYQIYKEKEFSYSAPGEYVAPQPNRNRLLHLDDMFDGVKTGYTRAAGHCLVGSSTR 240

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVP 290
            D  LIAV+LG+   + R     +L+  G+     R+ ++   +         N  +   
Sbjct: 241 DDMRLIAVVLGS-GIDKRFADVRALVGYGYQYFKTREIVSSGDEIDSLSVIAGNQDSVSV 299

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFI------DFEKITLLKNKITK 335
            + + V  T K+ I+   Q+   +   +  I        + I    N I +
Sbjct: 300 GVDKSVVMTLKKNIDLELQILAQERIVAPVIRGTTAGTLKIIDEDGNIINE 350


>gi|254518746|ref|ZP_05130802.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           7_2_43FAA]
 gi|226912495|gb|EEH97696.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           7_2_43FAA]
          Length = 401

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 152/361 (42%), Gaps = 32/361 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET----------------------NKLPYYTLLDTNT 38
           M + + I+   +  ++ P  +  E                              L++  +
Sbjct: 1   MNKVVAIVLSLLSISVVPVKADVEPYDTSIETYEEWTTEVFSDEGINVDAKSALLIEPKS 60

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G ++ E   D  + PAS+TK+MT  +    +   K  L   +T S+NA +   S      
Sbjct: 61  GKILYEKNIDEKFAPASVTKIMTMLLTMEAVDSGKITLQDKVTCSENAKKMGGSTMLLDT 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
           G   T++  +K + + S ND AVA+AE L  TE  FV+ MN  ++ LG+  T F N +G+
Sbjct: 121 GEIRTVEELIKGVAIASGNDAAVALAEYLGGTEDAFVEMMNKRAQELGMVNTTFKNCNGL 180

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
              GH +TARD++I+S  +            +   I        +  N N  V  F G D
Sbjct: 181 PIEGHLSTARDISIMSLELLKHPTILKYSGIYMETISEGRKSPIELVNHNKLVRFFEGCD 240

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG+T  + + I A+A +    +++VI+GA     RN+ +  LL+ GF     +K ++
Sbjct: 241 GLKTGYTEEAKYCISATATRNGVRMLSVIMGAPTYKVRNRDAGMLLNYGFSKFEGKKLLS 300

Query: 275 YIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                      +Q     V    E++     +  N   + +   D      ++++  ++ 
Sbjct: 301 KDEDVENIYLSKQTDKFLVARAKEDLVAIVPKGTNEELEKRIVID--EVKKEYKQGDIVG 358

Query: 331 N 331
            
Sbjct: 359 K 359


>gi|304316607|ref|YP_003851752.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778109|gb|ADL68668.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 418

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 82/348 (23%), Positives = 147/348 (42%), Gaps = 22/348 (6%)

Query: 1   MRQ-FLVIIAMAMLSNIFP---FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ F  I+A  +L +  P    +        P   L+D  TG V+ +        PAS 
Sbjct: 1   MKKTFTFIMAFIILISFIPHVYAIESPPQIVGPTAVLMDFTTGQVLYDKNMHQKMYPAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK++TA +     K     L   +T++ +      ++     G  +TL+  L  ++++SA
Sbjct: 61  TKILTAIIAIEKGK-----LNDVVTVNDDVKNIDGNSIYLVPGEKLTLEQLLYAMLLESA 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+A+A+ +  + + F   MN  +K +G + +HF+N +G+  + HY+T  DMA+++  
Sbjct: 116 NDAAIAVADHIGGSVQAFADMMNKKAKEIGANDSHFVNPNGLPDNNHYSTPYDMALIARY 175

Query: 177 IKTDFPQYMHYFQI--------KGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASGF 226
              +         I        K  + +     N     +   + GADG+KTG+T A+  
Sbjct: 176 AMGNATFRKIVSTIHYQILPTNKFDKPRDLWISNRLIKPSSFHYDGADGVKTGYTIAANQ 235

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY--QQN 284
             V SA +    LI+VI+G    N     + +LL  GF N T    +       Y     
Sbjct: 236 VFVGSATRNGHRLISVIMGDEGTNI-WSDTINLLDYGFNNYTLVNPLEKDSIVTYADVGE 294

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  ++P I+++           N          +     +K T+L   
Sbjct: 295 VKFKLPLIAKDSFYYAVPKGEENNIKSSITLDNNIKAPIKKGTVLGKI 342


>gi|218133227|ref|ZP_03462031.1| hypothetical protein BACPEC_01091 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992100|gb|EEC58104.1| hypothetical protein BACPEC_01091 [Bacteroides pectinophilus ATCC
           43243]
          Length = 400

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 90/355 (25%), Positives = 157/355 (44%), Gaps = 21/355 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFL----------SIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           R+   I+   +++ +              +     + P   L++ +TG  + E   D   
Sbjct: 10  RRIAGILLTVIVAVLAAVPVQSMCMYRVNAAEPDVESPSVILMEASTGKTVYEKNADETL 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
           +PAS+TK+MT  ++F  L E K  L   +T+S++A+    S    + G   T++  +K +
Sbjct: 70  HPASITKIMTLILIFDALSENKITLEENVTVSEHAASMGGSQVFLEAGEKQTVNTMIKCI 129

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            V SAND +VA+AE +  +E+ FV  MN  ++ LG+S THF+N  G+   GH  TARD+A
Sbjct: 130 SVASANDASVAMAEHIWGSEQTFVDKMNERAQGLGMSGTHFVNCCGLDTDGHMMTARDVA 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADGMKTGFTCA 223
           I+S  + T +PQ   Y  I    I              NTN  +  +  A G+KTG T  
Sbjct: 190 IMSRELITRYPQIHEYSGIWMDTITHNTRRGESEFGLSNTNKLIKQYEWATGLKTGSTGL 249

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF---YNKTDRKKINYIIKDF 280
           +   + A+A +    LIAV++ A +  TR K + SLL+ G+       D   ++      
Sbjct: 250 AKCCLSATAEKDGIELIAVVMAAPNSKTRFKDAISLLNYGYGVVDIYRDNAWLSQEKMVV 309

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +     +     + E      E  +        +  +       +  ++   + +
Sbjct: 310 HGGKSDSVKCRKNNEFVYVFTEDTDTGRIKCTEEYADGLEAPVYEGDVVGQMVYE 364


>gi|99082376|ref|YP_614530.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruegeria sp. TM1040]
 gi|99038656|gb|ABF65268.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruegeria sp. TM1040]
          Length = 496

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 98/255 (38%), Positives = 140/255 (54%), Gaps = 1/255 (0%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  TG V+     D   +PASLTK+MT Y+ F  ++  +  L T IT+S+NA   PP
Sbjct: 1   MVMDARTGEVLHSRNADTRLHPASLTKMMTLYIAFEAVRNGEITLDTQITVSRNAEAEPP 60

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    ++G  + L   ++   VKSAND A AI E++  +E  F + MN T+K LG++ T 
Sbjct: 61  SELGLRRGQKIALRYLIRAAAVKSANDAATAIGEAISGSEAAFARRMNRTAKALGMTRTT 120

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-GTF 210
           F NAHG+  +GH +TARDM IL   +  D+P+Y + F         K   NTN      +
Sbjct: 121 FKNAHGLTANGHMSTARDMTILGRHMLYDYPEYYNLFSRTSTNAGTKVVYNTNRRFLAAY 180

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
            GADG+KTG+T A+GFN+V+SA +GD+ +IA + G      RN   A LL +GF      
Sbjct: 181 RGADGIKTGYTRAAGFNLVSSAKRGDERIIATVFGGKSTAARNAKIAELLDLGFRRAPAY 240

Query: 271 KKINYIIKDFYQQNL 285
            K+       Y  N 
Sbjct: 241 AKLQKPPMPPYLGNS 255


>gi|238794862|ref|ZP_04638462.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia intermedia ATCC
           29909]
 gi|238725805|gb|EEQ17359.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia intermedia ATCC
           29909]
          Length = 401

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 96/315 (30%), Positives = 146/315 (46%), Gaps = 11/315 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             Y L+D N+G V+ E   D   +PASLTK+M++YV+   +K  K      +T+ K+A  
Sbjct: 41  KAYVLMDYNSGKVLVEGNSDQRLDPASLTKIMSSYVIGQAIKAGKVHPDDLVTVGKDAWA 100

Query: 89  YPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                         K G  + L +  K ++++S ND ++A+A+ +  ++  FV  MNN +
Sbjct: 101 TGNPALRGSSLMFLKPGDQVKLSDLNKGIVIQSGNDASIALADYVAGSQDSFVGLMNNYA 160

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K       +  N
Sbjct: 161 KALGLSNTHFMTVHGLDAPGQYSTARDMAVLGQALIRDVPEEYALHKEKEFTFNKIRQIN 220

Query: 203 TNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N     T L  DGMKTGFT  +G N+VASA +G   LI+V+LGA     R   S  LLS
Sbjct: 221 RNRLLWNTNLNVDGMKTGFTSGAGHNLVASATEGPMRLISVVLGAPSDRVRFSESEKLLS 280

Query: 262 MGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
            GF        I        +  +  +       ++E+   T  +    + +     D+ 
Sbjct: 281 WGFRFYETVVPIKATNPFVTQKVWFGDTGKAELGVAEDAAITIPKGKMKDLKASYKLDQA 340

Query: 318 SHFIDFEKITLLKNK 332
                  K  ++   
Sbjct: 341 ELRAPLAKHQVVGTI 355


>gi|71898423|ref|ZP_00680595.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa Ann-1]
 gi|71731736|gb|EAO33795.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xylella fastidiosa Ann-1]
          Length = 347

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 84/314 (26%), Positives = 152/314 (48%), Gaps = 11/314 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE----- 88
           +D  +G V+A         PASLTK+MT+YV+ + +K  K      + +++NA       
Sbjct: 1   MDYASGQVLAGENIHTHLAPASLTKVMTSYVIAAEIKNGKVHRDDQVMMTENAWRKGGAG 60

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S S F    T  L++  + +IV+S ND A+A+A+ +  +E+ F   MN+ ++ +G+ 
Sbjct: 61  TDGSYSGFPVNKTARLEDMEQGMIVQSGNDAAIALAQHVAGSEEAFASLMNSYAQRIGMK 120

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            +HF++A G+   GHY++A DMA+L   +  DFP+   Y ++K L + G K  N N  + 
Sbjct: 121 NSHFVDATGLSAEGHYSSAYDMALLGRALIRDFPETYAYNKVKELVVNGIKQSNRNLLLW 180

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                DG+KTG T  +G+ I+ SA +GDQ ++ V++G +    R + S +LL+ GF    
Sbjct: 181 RDPSVDGIKTGHTSEAGYCIINSAKRGDQRILTVVMGDVSEKKRAEDSLALLNWGFRFFE 240

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTT------QKEIINYNTQMKEAKDKESHFID 322
                         +    +V  +   V         +    +    ++  ++ E+    
Sbjct: 241 THTLYEPGKVVIKHKIWKGQVSEVQLGVPRPLFVTVQRGRYNDLKPSIEVPRNLEAPIKP 300

Query: 323 FEKITLLKNKITKK 336
            + +  +K  +  K
Sbjct: 301 GQLVGKVKVTLDGK 314


>gi|269104718|ref|ZP_06157414.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161358|gb|EEZ39855.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 414

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 87/338 (25%), Positives = 145/338 (42%), Gaps = 14/338 (4%)

Query: 6   VIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +I A  ++   F     +L          + L+  NTG +IA +    P  PASLTK+MT
Sbjct: 12  LIFASCLVIPSFYSHSAYLLDPPDIDAKAWVLMSYNTGQIIAGDNLHKPLAPASLTKIMT 71

Query: 62  AYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +VV   +K     L+  +TIS+NA        S      G ++++++ L+ +IV S ND
Sbjct: 72  TFVVGEEIKAGNIQLSDMVTISENAWGKKFPGSSKMFLNVGDSVSVEDLLRGVIVSSGND 131

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             VA+AE +   +  F++ MN  ++  G+  ++F N HG+      T+A DMA+L+    
Sbjct: 132 ATVALAEHVAGHQSAFIKMMNQYAERYGMKDSYFSNPHGLDADDQTTSAYDMALLTRAFI 191

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            + P      + K       K  N N       L  DG+KTG+T  +G+++V+SA  G+Q
Sbjct: 192 QEVPDIYDMHKEKSFTFGDIKQGNRNALLWDETLHVDGVKTGYTKQAGYSLVSSAKNGEQ 251

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE-- 295
            LIAV+LG      R   S  LLS GF    D             +    E  +      
Sbjct: 252 RLIAVVLGTKSAKARRLESKQLLSWGFRFYEDITPQLDDKLLEPIRIWHGEPASAELTLG 311

Query: 296 ----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
               +    +        +   ++        +++  +
Sbjct: 312 DAGMITVPSRLKNKLKPIITYRENLAPPLEKGQQVGKI 349


>gi|84686497|ref|ZP_01014390.1| D-alanyl-D-alanine carboxypeptidase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665410|gb|EAQ11887.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacterales bacterium
           HTCC2654]
          Length = 401

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 140/337 (41%), Gaps = 8/337 (2%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR+      +   +L+ +    + A         ++D  T  V+ E     P  PAS++K
Sbjct: 1   MRRCHVTARLLTTLLAGVIALPAFAFETSARSAYVVDLTTNTVLLEKNAQVPLPPASMSK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMT  ++F  L++ +  L T   +S+ A +   S          T++  +K +IV S ND
Sbjct: 61  LMTLNMLFEALEDGRVSLDTQFNVSQRAMDMGGSTMFLTTQDRPTVEELIKGIIVLSGND 120

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             V +AE L  TE  F   M   ++ LG+  + F NA G        +  D+AIL+ R+ 
Sbjct: 121 ACVVVAEGLGGTEDAFASMMTQRARALGMENSTFGNASGWPHPAQRMSTEDLAILAERLI 180

Query: 179 TDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +FPQY HYF I+             N N      LGADG+KTG T  +G+ +V SA+QG
Sbjct: 181 EEFPQYYHYFGIEEFPYDGRAPDNRFNRNPLFDLGLGADGLKTGHTQEAGYGLVGSAMQG 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI 292
           ++ ++ V+ G      R   SA++++  F     R  +       +       +  V   
Sbjct: 241 NRRVVLVVSGLDSEAARRSESAAIINFAFRQFVMRTAVESGQVIAEIPVWLGEAQTVALA 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + E       +  +     E            K   +
Sbjct: 301 APEDVELLIPVTAHEGIKGEVTWSGPVEAPISKGDEI 337


>gi|83593448|ref|YP_427200.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodospirillum rubrum
           ATCC 11170]
 gi|83576362|gb|ABC22913.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodospirillum rubrum
           ATCC 11170]
          Length = 468

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 92/263 (34%), Positives = 140/263 (53%), Gaps = 4/263 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + L ++A+  L    P  + A         ++D +TG V+     D    PASLTK+MT 
Sbjct: 26  RILAMLAVVFLLLGLPTQAFA----GYASIVVDASTGRVLQARNADMRNYPASLTKMMTL 81

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  +   K  L + + +SK A+   PS      G+ + +++A+K L+ KSAND+AV 
Sbjct: 82  YLLFEAIDNGKYTLESRLPVSKWAANQAPSKLGVAAGTGIKVEHAIKALVTKSANDVAVV 141

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           IAE+L  TE  F   M   +  LG+S T F NA G+  +G  TTARDMA+LS  +   FP
Sbjct: 142 IAEALGGTEANFSALMTRKAAALGMSQTTFRNASGLPNNGQMTTARDMAVLSMALIRHFP 201

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
            +  +F  +      +     N  V  + GADG+KTG+  ASGFN+ +SA++  + L+AV
Sbjct: 202 NHYRFFATQSFRFGNRTITTHNHVVREYPGADGLKTGYIQASGFNVASSAVRNGRRLVAV 261

Query: 243 ILGALDRNTRNKVSASLLSMGFY 265
           + G      R+    +LL  GF 
Sbjct: 262 VFGGQTARARDTQMMALLDEGFA 284


>gi|300705317|ref|YP_003746920.1| d-alanyl-d-alanine carboxypeptidase [Ralstonia solanacearum
           CFBP2957]
 gi|299072981|emb|CBJ44338.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Ralstonia solanacearum CFBP2957]
          Length = 398

 Score =  190 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 15/327 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A       + L D  +G V+     D    PASLTKLMTAY+ F  +++ K     
Sbjct: 33  QPVPAPQVTARAWMLTDVTSGQVLGGGNMDERVEPASLTKLMTAYIAFEAVRDGKLKYDQ 92

Query: 79  PITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            IT ++     +   S    + G  +++   L+ LIV+S ND A+ +AE++  TE  FV 
Sbjct: 93  LITPTETVRTVKTDESRMFLQAGKPVSVRELLQGLIVQSGNDAALVLAEAVGGTETNFVM 152

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG+  THFMNA G+    HYTTARD++IL+  +  +FPQ   ++  K     
Sbjct: 153 LMNREAERLGMKNTHFMNAAGLPDPNHYTTARDLSILTAALIKNFPQDYKFYSQKEFTYN 212

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDR 249
             K PN N  +      DG KTG T ++G+ +V SA +         + L++VI+G    
Sbjct: 213 NIKQPNRNRLLWLDPTVDGGKTGHTKSAGYCLVTSANRPLPDVPGASRRLLSVIVGTKSD 272

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE--VCTTQKEI 303
             R + S  +L+ G+      +  +        D Y+    N    + +   +   +   
Sbjct: 273 QIRTQESLKVLNYGYQFFDTLRLYDAQQVLQTPDVYKGQAKNVKIGVMDAKWITVPKGMG 332

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLK 330
            +    ++      +     + +  +K
Sbjct: 333 GHLKPVLERKDPLIAPIAQGQPLGTVK 359


>gi|198284286|ref|YP_002220607.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665720|ref|YP_002426947.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198248807|gb|ACH84400.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517933|gb|ACK78519.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 388

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 90/347 (25%), Positives = 145/347 (41%), Gaps = 18/347 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYPDHP 50
            +  I   +    F   + A T                  YTL+D +TG +IA    +  
Sbjct: 7   LITRILFLLAGFCFTPWASAATPTPMLPTPPAPALPAIVSYTLMDYDTGQIIAAKSENLR 66

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PASLTKLMTAY+ +  ++         I IS  A +   S+   +      +D  L  
Sbjct: 67  RAPASLTKLMTAYLTYQAIQGGTLTAQENIPISNTAWKTGGSSMFVQPNVPANVDQLLHG 126

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L++ S ND AVA+AE++  ++  FV  MN+++  L L  TH+ N  G+  +  YTTA D+
Sbjct: 127 LLIDSGNDAAVALAEAVGGSQSGFVTLMNDSALRLNLHNTHYSNVDGLPDNNLYTTALDV 186

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           A LS      FPQ +   + K     G    + N  +      DG+KTG T ASG+ I A
Sbjct: 187 AKLSRAFIRQFPQVIQITKEKSYTYNGITQRSWNPVLFRDPTVDGLKTGLTDASGYCIDA 246

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE-- 288
           +AI+  + LIAV+LG            +LL  G+    +        K            
Sbjct: 247 TAIRNGRRLIAVVLGGPSWAGSTNAVEALLDYGYRFFVNHPVYTAGEKVSEISRSDLSPM 306

Query: 289 --VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                + + V  T  +   +++  +  +      +  +K T++   +
Sbjct: 307 HIPVGVEQNVDITVPKG-RFSSLQRVVEIAPHLQVPMKKGTVVGRLV 352


>gi|134300784|ref|YP_001114280.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
 gi|134053484|gb|ABO51455.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
          Length = 397

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 14/313 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  TG V+    P      AS TK+MTA V           L +  ++S+ 
Sbjct: 60  LSAYSALVMDAATGQVLFAKNPHQARAIASTTKIMTALVAIEC-----GNLNSATSVSQR 114

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+    S+   K    +TL+  L   +++S ND  VAIAE +   E  FV  MN  ++ L
Sbjct: 115 AAGVEGSSVYLKPNEKLTLEQLLYGALMRSGNDACVAIAEQIAVREDIFVGFMNMKARQL 174

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGKKYPN 202
           G   THF N++G+    HY++A D+A+++     +            +       +   N
Sbjct: 175 GAKNTHFCNSNGLPNDHHYSSAYDLALITRAALKNPVFSRIVSTKTHVIPGTEGKRLLSN 234

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  + ++ GADG+KTG T A+G  +V+SA +  + LIAV+L + D   R   S  LL+ 
Sbjct: 235 TNKMLWSYQGADGVKTGTTNAAGKCLVSSASRDGRRLIAVVLHSDD---RWNESIKLLNY 291

Query: 263 GFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           GF     R+ ++          +  +   VP            I       +E   +   
Sbjct: 292 GFNRFEQRRVVDAGKTFASVEVRDGVLGRVPITVNRDVVVTVPIDRTGKLEQEVMLERKI 351

Query: 320 FIDFEKITLLKNK 332
                   ++   
Sbjct: 352 SAPVFPGQVVGKL 364


>gi|148252530|ref|YP_001237115.1| putative D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium sp.
           BTAi1]
 gi|146404703|gb|ABQ33209.1| putative D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium sp.
           BTAi1]
          Length = 480

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 100/287 (34%), Positives = 157/287 (54%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++ +TG V+      +PW PAS+TKLMTAYV    +KE K  L T +T+S  
Sbjct: 29  ANAEALLLVEADTGKVLEAQNATYPWYPASVTKLMTAYVTLKAVKEGKLSLDTLVTVSPT 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+   PS   ++ G+ +T+DNALK+++VKSAND+AV +AE +  +   F   MN T++ L
Sbjct: 89  AAAQSPSKMGYRPGTQLTVDNALKMMLVKSANDMAVVLAEGVGGSIDGFSAMMNETAQKL 148

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G++ T ++N +G+   G  T+ARD+AIL+  I  D P+Y ++  I  +    +   N N 
Sbjct: 149 GMTQTSYVNPNGLPADGQITSARDLAILARAIIRDLPEYEYFVHIPSIRYGRRVVQNFNR 208

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +G + GADG KTGF CASG+N+VASA +  + LIAV+LGA     R   +  +L  GF 
Sbjct: 209 LIGRYPGADGFKTGFICASGYNLVASATRNGKRLIAVVLGASSGQMRGVRAIQMLDRGFN 268

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
                     +        +    PN+ +++C  ++     +   + 
Sbjct: 269 GNQLGWLKAPLGNVEQLVPVDATPPNLRDDMCGGKRHRPASDDDEET 315


>gi|238795791|ref|ZP_04639304.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia mollaretii ATCC
           43969]
 gi|238720254|gb|EEQ12057.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia mollaretii ATCC
           43969]
          Length = 424

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 144/315 (45%), Gaps = 11/315 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             Y L+D N+G V+ E   D   +PASLTK+M++YV+   +K  K      +T+ K+A  
Sbjct: 64  KAYVLMDFNSGKVLVEGNSDQRLDPASLTKIMSSYVIGQAIKAGKVHPDDLVTVGKDAWA 123

Query: 89  YPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                         K G  + L +  K ++++S ND ++A+A+ +  ++  FV  MNN +
Sbjct: 124 TGNPALRGSSLMFLKPGDQVKLSDLNKGIVIQSGNDASIALADYVAGSQDSFVGLMNNYA 183

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           K LGL+ THFM  HG+   G Y+TARDMA+L   +  D P+     + K       +  N
Sbjct: 184 KALGLTNTHFMTVHGLDAPGQYSTARDMAVLGQALIRDVPEEYALHKEKEFTFNNIRQIN 243

Query: 203 TNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N     T L  DGMKTGFT  +G N+VASA  G   LI+V+LGA     R   S  LL+
Sbjct: 244 RNRLLWSTNLNVDGMKTGFTTGAGHNLVASATDGPMRLISVVLGAPSDRVRFSESEKLLT 303

Query: 262 MGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
            GF        I           +  +       ++E+   T  +    N +     D+ 
Sbjct: 304 WGFRFYETVVPIKATKPFVTQKVWFGDTGQAELGVAEDAAITIPKGQMKNLKASYKLDQT 363

Query: 318 SHFIDFEKITLLKNK 332
                  K  ++   
Sbjct: 364 ELRAPLAKHQVVGTI 378


>gi|84516821|ref|ZP_01004179.1| D-alanyl-D-alanine carboxypeptidase [Loktanella vestfoldensis
           SKA53]
 gi|84509289|gb|EAQ05748.1| D-alanyl-D-alanine carboxypeptidase [Loktanella vestfoldensis
           SKA53]
          Length = 392

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 77/337 (22%), Positives = 147/337 (43%), Gaps = 10/337 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +IA  ++       + A         + D  TG V+     D P  PAS++KLMT Y+ F
Sbjct: 8   LIAGLIMICATAAQAQALETSARAAYVYDQTTGTVLLAKDADLPLPPASMSKLMTIYMAF 67

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             + + +  +   + +S +A+ +  S+        + +++ L+ +IV S ND +V +AE+
Sbjct: 68  EAIADGRLSIDDVLPVSAHAASFGGSSMFLDTTDRVRVEDLLRGVIVLSGNDASVVLAEA 127

Query: 127 LCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           L     E  F + M + ++ LG++ + F+NA G     H  + +D+ ILS R+ +DFP +
Sbjct: 128 LSPDGTEAGFGRMMTDRARQLGMTQSFFVNASGWPAAEHRMSVKDLGILSSRLISDFPTF 187

Query: 185 MHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              F         +      N N  +   +GADG+KTG T  +G+ +V SA+QG++ +I 
Sbjct: 188 YPLFSETEFAFDNRVPSNSQNRNPILAMGIGADGLKTGHTQEAGYGLVGSAMQGNRRVIF 247

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVC 297
           V+ G      R + S  +++  F    +R       +    D +     +    ++E++ 
Sbjct: 248 VVTGLQTARDRAEESERIVNWAFRQFAERDLAVAGTQIASADVWMGAAPSVGLTVAEDLR 307

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                + +     +   D             +   I 
Sbjct: 308 LLVPVLHDGALDAQVIFD-GPLQAPVSAGQQVGELII 343


>gi|85707408|ref|ZP_01038489.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius sp.
           217]
 gi|85668064|gb|EAQ22944.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius sp.
           217]
          Length = 480

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 105/326 (32%), Positives = 167/326 (51%), Gaps = 6/326 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  LV++A   +  I P  + A         ++D  +G V+  N  D   +PASLTK+MT
Sbjct: 10  RWGLVVMATFWMLIIVPLSAAAAPYAA---LVMDARSGEVLYSNNADTRLHPASLTKMMT 66

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            YVVF  ++  +  L   + ISK+A+  PPS    + GS++ L   ++   VKSAND A 
Sbjct: 67  LYVVFEAIENGEIGLDDKVLISKHAASEPPSKLGVRAGSSIALRYLIRAAAVKSANDAAT 126

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+ E++  +E +F + MN T+++LG+S T F NAHG+ ++GH +TARDM+IL   +  DF
Sbjct: 127 ALGEAIEGSEAQFARRMNRTAESLGMSRTTFKNAHGLTENGHLSTARDMSILGRHLFYDF 186

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           PQY + F     +       +TN   +  + GADG+KTG+T A+GFN+ ASA +  + +I
Sbjct: 187 PQYYNLFSRITTDAGVTSVSHTNRRLLEAYRGADGIKTGYTRAAGFNLTASAERNGERII 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS--EEVCT 298
           A + G     +RN   A LL +GF     +  +    +  Y   +      I+  E+  +
Sbjct: 247 ATVFGGQSTASRNAKVAELLDLGFKKAPTQVAVLRPARPPYLGKIGTVPVRIAAGEDRPS 306

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFE 324
              + +   T     K         +
Sbjct: 307 VAAKTVRLATAAAVIKSLRPQSRPSQ 332


>gi|197104762|ref|YP_002130139.1| D-alanyl-D-alanine carboxypeptidase [Phenylobacterium zucineum
           HLK1]
 gi|196478182|gb|ACG77710.1| D-alanyl-D-alanine carboxypeptidase [Phenylobacterium zucineum
           HLK1]
          Length = 417

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 102/322 (31%), Positives = 158/322 (49%), Gaps = 11/322 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
              P+  +A+T+      ++D  TG V+ EN  D P  PAS+TK+MT Y+ F  L   K 
Sbjct: 29  AQIPYQMLAQTSSKYAAIVVDAKTGEVLYENRADSPRYPASITKVMTLYLTFEALASGKI 88

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   +  S  A+  PP+    + G ++++D A+K L  KSAND AVA+AE L  TE++F
Sbjct: 89  DLDDRVVFSPRAAAQPPTKLGVRAGDSISVDEAMKALATKSANDAAVALAEKLAGTEQRF 148

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
              M   ++ LG++ T+F NA G+      +TARD+AILS  +  D+PQY   F ++   
Sbjct: 149 AALMTLRARELGMTDTNFANASGLPDSRQVSTARDIAILSRAVMRDYPQYYKLFSLQYFN 208

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +G+   N N  +    G DG+KTGF  ASGFN+ ASA++  + LIAV+LG      R+ 
Sbjct: 209 FRGQTMRNHNGLLHRMDGVDGLKTGFINASGFNLAASAVRDGRRLIAVVLGGPTSRARDN 268

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            + SLL  GF           + +    +++          +   + +           K
Sbjct: 269 NAESLLLTGF---------EVLDRRARGEDIQVAQSFFESPMTGGRVQPQTAQGDEDSMK 319

Query: 315 DKESHFIDFEKITLLKNKITKK 336
              +       I   K +I +K
Sbjct: 320 IVLASTAP--PIRASKVEIVEK 339


>gi|295100396|emb|CBK97941.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           L2-6]
          Length = 418

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 92/316 (29%), Positives = 145/316 (45%), Gaps = 12/316 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+ E   D     AS+TK+MT  + F  + + +  + TP+ +S+
Sbjct: 65  DLNCRAAILIEQGSGRVLYEKNADERVPIASITKVMTLLLAFEAVHDGRLTMETPVPVSE 124

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A     S    + G   TLD  +K + V SAND AVA+AE +  +E  FV+ MN  + +
Sbjct: 125 HAYHMGGSQIWLEPGEHFTLDEMIKAICVSSANDAAVAVAELVGGSEPAFVEQMNARAAS 184

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--YMHYFQIKGLEIKGKKYPN 202
           LG+  T F NA G+   GH +TARD+A +S  I    P+  +        L     +  N
Sbjct: 185 LGMEQTSFRNACGLDAEGHLSTARDVAAMSRTILNTCPEVLHYTGIWTDTLRGGATQLIN 244

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN  +  + G  G+KTG T  +G  I ASA +   SLIAVILGA     R   + +LL  
Sbjct: 245 TNKLLRRYEGITGLKTGTTGGAGICISASATRNGLSLIAVILGAPSSADRFNAATTLLDY 304

Query: 263 GFYNKTD---RKKINYIIKDFYQQNLSNEVPN----ISEEVCTTQKEIINYNTQMKEAKD 315
           GF         K     ++   + + +  VP     + E V   +    + +T++   ++
Sbjct: 305 GFGAYEAAPLPKLEAQPLQITVKGSAAGSVPLDYSALPETVLVEKGSGASLHTELTLPEE 364

Query: 316 KESHFIDFEKITLLKN 331
            E      E+   L  
Sbjct: 365 LE---APVERGQTLGK 377


>gi|302389347|ref|YP_003825168.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosediminibacter
           oceani DSM 16646]
 gi|302199975|gb|ADL07545.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosediminibacter
           oceani DSM 16646]
          Length = 410

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 18/329 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            ++         +       L+D  TG V+ E        PAS TK+MT  +     K  
Sbjct: 19  STSKVTAAPSPPSIVGTAGILMDVKTGKVLYEKNAHLKLEPASTTKIMTTVIALEKGK-- 76

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L+  +   +  +    +    ++G  +TL+  L  +++ S ND AVAIAE +  +  
Sbjct: 77  ---LSDTVVTGREPTLADGTRIYLEEGEKLTLEQMLYGMMLNSGNDAAVAIAEHIAGSVP 133

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +F + MN  ++ +G   T+F+N  G+    HYTTA D+A++S     + P++      K 
Sbjct: 134 EFAKLMNEKAREIGAKNTNFVNPSGLPDKNHYTTAYDLALISRYALLNHPEFRKIVSTKT 193

Query: 193 LEIKGKK------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            +I  +         N N  +  + G DG+KTG+T ++G   VASA +    L+AV+L +
Sbjct: 194 FKIPWQGKEWDRLLINHNKMLWRYEGTDGVKTGYTRSAGQTFVASATRNGWQLLAVVLKS 253

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI--SEEVCTTQKEII 304
             RN     + +LL  GF N   +  IN                ++  + +     ++  
Sbjct: 254 QGRNI-YSDAQALLDYGFDNFEKKDVINKGQIIDKIDVKYGTPVDLLAASDFTAVVEKG- 311

Query: 305 NYNTQMKEAKDKES-HFIDFEKITLLKNK 332
             +  +   K+          K  +L N 
Sbjct: 312 --SGPIDVKKNIYPGVKAPVVKGQVLGNL 338


>gi|254486408|ref|ZP_05099613.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. GAI101]
 gi|214043277|gb|EEB83915.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. GAI101]
          Length = 389

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 145/343 (42%), Gaps = 14/343 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           I A  +   +      A   +     ++D  TG V+     D P  PAS++KLMT Y+ F
Sbjct: 4   IFAATIALILTTLPGHAFETRASAAYVIDQTTGTVLLAKNADDPLPPASMSKLMTLYMAF 63

Query: 67  SFLKEKK----AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
             ++  K      LT  + +S++A  Y  S         + +++ L+ +IV S ND    
Sbjct: 64  EAVERGKSNGGLDLTEELPVSQHAMSYGGSTMFLDTTDRVKVEDLLRGIIVLSGNDACAV 123

Query: 123 IAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           IAE+L     E  F + M   ++ +G++ + F N++G    GH  + RD+ +++ R+ TD
Sbjct: 124 IAEALSPDGTEAGFARLMTRRAQQIGMTNSTFANSNGWPAAGHRMSMRDLGLVAMRLITD 183

Query: 181 FPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           FPQY   F  +         +   N N  +G  +GADG+KTG T  +G+ +V SA QGD+
Sbjct: 184 FPQYYPLFSQREFLFDGRAPQNKANRNPLLGLGIGADGLKTGHTQEAGYGLVGSAKQGDR 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNIS 293
            +I VI G      R + S ++++  F     R+  +   +           +     ++
Sbjct: 244 RVIFVISGLETAAERAQESEAIVNWAFRQFAQREMGSAGTQIAQAPVALGAQTAVGLELA 303

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            ++              +             K   +   +  +
Sbjct: 304 NDLSVLIPVSGGSEINAEVV-YTGPLRAPILKGDPIGELVLTR 345


>gi|170744322|ref|YP_001772977.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium sp.
           4-46]
 gi|168198596|gb|ACA20543.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium sp.
           4-46]
          Length = 402

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 11/318 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
             ++ P+  LLD ++G V+ E   D P++PAS+ KLMT  V+F  +++ +    +   IS
Sbjct: 34  FQSQAPHAILLDADSGSVLYEKNADEPFSPASMAKLMTVEVIFDEMRKGRLNQDSEFPIS 93

Query: 84  KNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +NA ++  +     +   +  S + L + L+ +IV+S ND A+A AE++  TE  F Q M
Sbjct: 94  ENAWKHGGAGGGGSSMFAQLNSKVKLPDLLRGIIVQSGNDAAIAAAEAIGGTEDNFAQIM 153

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ +GL+ + F N  G        TARD+A L+  +   +P     F  +       
Sbjct: 154 NRHAREIGLTRSTFRNPTGYSAPDQKVTARDLAKLAIHLIETYPDEYKLFSEREFTWNKI 213

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  N N  +   LGADG+KTG+   SG+ +  SA+Q  Q LI V+ G    + R   S  
Sbjct: 214 RQQNRNPLLTMDLGADGLKTGYLEESGYGLTGSAVQNGQRLILVVSGLKKASDRAAESRK 273

Query: 259 LLSMGFYNKTDRKKINYIIKDF------YQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           LL  GF     R+                ++     V      V   +        ++  
Sbjct: 274 LLDWGFRAFEGRQVFAPGETVAEVDTYGGEKGKVALVAKKPVRVLLPRGSADRLTARVVY 333

Query: 313 AKDKESHFIDFEKITLLK 330
               ++      ++  LK
Sbjct: 334 QGPLKAPIEAGREVARLK 351


>gi|163760149|ref|ZP_02167232.1| penicillin binding protein [Hoeflea phototrophica DFL-43]
 gi|162282548|gb|EDQ32836.1| penicillin binding protein [Hoeflea phototrophica DFL-43]
          Length = 394

 Score =  189 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 72/342 (21%), Positives = 139/342 (40%), Gaps = 10/342 (2%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +      +          +     +     +LD +TG V+     +    PASL KLMT 
Sbjct: 17  RLFFAFLVLFAGFTGAVRAQLFETRAEQAYMLDADTGTVLFSKNENDLVPPASLAKLMTM 76

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAN 117
            VVF+ ++  +  L     +S+NA          S    +  S++ L++ ++ +IV+SAN
Sbjct: 77  EVVFNAIRSGRLTLDDTFQVSENAWRTGGAISRTSTMFAELNSSIRLEDLIQGVIVQSAN 136

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  + IAE +  +E  F + M+  ++++GL+ + F N+ G+       + +D+  L+  I
Sbjct: 137 DGCIIIAEGMAGSEDNFSRLMSERARDIGLTQSVFANSSGLPHPHSKVSMKDLVTLARHI 196

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
              +P++  Y+          +  N N  +   +G DG+KTGFT  SG+ IVAS  +  +
Sbjct: 197 HATYPEFYRYYSQPEFTWNNIRQRNRNPLLNLDIGVDGLKTGFTEESGYGIVASIRRDGR 256

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNI-- 292
            L   + G      R + +  +L  G      +        I +       +N V     
Sbjct: 257 RLFVAMSGLSSERERAEEARKMLEWGVRAFERKTLFAADEIIGELSVYGGEANAVVKAAG 316

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           + ++            ++       +      ++ +LK  I 
Sbjct: 317 AVDILVPITNRDRLTARISYRWPLRAPLEAGAEVGMLKVYIG 358


>gi|84516588|ref|ZP_01003947.1| Probable penicillin-binding protein [Loktanella vestfoldensis
           SKA53]
 gi|84509624|gb|EAQ06082.1| Probable penicillin-binding protein [Loktanella vestfoldensis
           SKA53]
          Length = 521

 Score =  189 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 92/277 (33%), Positives = 145/277 (52%), Gaps = 6/277 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +  ++   +++     ++           ++D  TG V+     D   +PASLTK+MT Y
Sbjct: 14  YFCVLIFILIAAPIRGVAAP-----YAALVMDARTGEVLHARNADTRLHPASLTKMMTLY 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V F  ++  +  L T +T++ +A+  PPS    + G  + L   ++   V+SAND A AI
Sbjct: 69  VAFQAIERGEISLDTEVTVTSHAANEPPSKLGLRAGQRIRLRYLIRAAAVRSANDAATAI 128

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
             ++  +E+ F   MN T+  +G+S T F NAHG+ Q GH +TARDM++L   +  DFPQ
Sbjct: 129 GIAISGSEEAFATRMNQTAAAMGMSNTTFRNAHGLTQSGHLSTARDMSVLGRHVIYDFPQ 188

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           Y + F  +  +       +TN     ++ G DG+KTGFT ASGF++VASA +GDQ +IA 
Sbjct: 189 YYNLFSRRTADAGVATVQHTNRRWLDSYPGGDGIKTGFTNASGFSLVASAQRGDQRIIAT 248

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           + G      RN   + L+ MGF        +N     
Sbjct: 249 VFGGTSTAARNARISELMDMGFSTAPRSANVNRPTPP 285


>gi|291545871|emb|CBL18979.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. SR1/5]
          Length = 395

 Score =  189 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 88/329 (26%), Positives = 156/329 (47%), Gaps = 20/329 (6%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            + P   L++  TG VI    PD   +PAS+TK+MT  ++F  ++E    L   IT S  
Sbjct: 39  IEAPGAVLMEKETGTVIYSRDPDTRRSPASITKIMTLILIFDAIREGTLHLEDSITTSAY 98

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S    ++G   T +  +K +++ S ND +VA+AE +  TE+ FV+ MN  +K+L
Sbjct: 99  ARSMGGSQVFLEEGEKQTAETMIKCIVIASGNDASVAMAEHVAGTEQAFVERMNERAKDL 158

Query: 146 GLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------- 197
           G+  THF++  G+     HYTT  D+A++S  + + +P+ + Y  +   +I         
Sbjct: 159 GMKNTHFVDCCGLTESQEHYTTPYDIALMSRELISRYPEVLTYSSVWIEDITHVTRKGSS 218

Query: 198 -KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  + ++ G  G+KTG T  + + + A A +   +LIA ++ A D  TR + +
Sbjct: 219 KFTLTNTNKLLRSYEGCMGLKTGSTSIAKYCLSAVAERNGITLIASVMAAPDPKTRFRDA 278

Query: 257 ASLLSMGFYNKTDR--KKINYIIKDFYQQNLSNEVPNIS----EEVCTTQKEIINYNTQM 310
           A+LL+ GF   T      +  +     ++ +  +VP +       + T   +  N   ++
Sbjct: 279 AALLNYGFSKCTLYLDDALEPLKPLKLRKGVKEQVPLVYRGKFRYISTDGTKPDNVKKKL 338

Query: 311 KEAKDKESHFIDFEKIT-----LLKNKIT 334
              K++ +     +K           KI 
Sbjct: 339 ILPKEQSAPVKKGQKAGAQEYYQDGKKIG 367


>gi|225872450|ref|YP_002753905.1| D-alanyl-D-alanine carboxypeptidase family protein [Acidobacterium
           capsulatum ATCC 51196]
 gi|225792978|gb|ACO33068.1| D-alanyl-D-alanine carboxypeptidase family protein [Acidobacterium
           capsulatum ATCC 51196]
          Length = 414

 Score =  189 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 142/264 (53%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +Q L+     +++     ++      +    L+D  +G V+   + D   +PASLTKLMT
Sbjct: 17  KQSLLSAGCLLMALTALAMARPAQAVVHASLLMDARSGKVLYAYHADERTHPASLTKLMT 76

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  L++ +  L   + IS +A+   PS      G T+++ + +  +I  SAND AV
Sbjct: 77  LYLTFQRLQDGRMRLDERLHISAHAAGQQPSKMWLHAGGTVSVRSCILGIISHSANDAAV 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +AE +  TE +F + MN  ++ LG++ T F NA G+     +TTA DMA L+  +   F
Sbjct: 137 TLAEGMAGTEWRFTRLMNEQARRLGMTHTIFYNASGLPDGRQWTTAYDMAKLARALIYTF 196

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           PQY H+F +     +G+   + +     + G DGMKTG+  +SGFNIV SA++    +I 
Sbjct: 197 PQYYHFFSVHAFRYQGRMLYSFDRLPQEYTGVDGMKTGYINSSGFNIVTSAVRNHHRVIG 256

Query: 242 VILGALDRNTRNKVSASLLSMGFY 265
           V+LG    ++R+    +LL+ GF 
Sbjct: 257 VVLGGATAHSRDLQMIALLNRGFR 280


>gi|269102681|ref|ZP_06155378.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162579|gb|EEZ41075.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 348

 Score =  189 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 7/308 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYP 90
           +D +TG V+ E+  +   NPASLTKLMT+YV    +K+        + IS+NA     + 
Sbjct: 1   MDYHTGRVLVEHNANEKLNPASLTKLMTSYVAGQEMKQGNISKDDVVVISRNAWARNFHD 60

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S    + G+ + + +  + LI++S ND +VAIAE +  ++  FV  MN+ +K L ++ +
Sbjct: 61  SSKMFIEVGAEVPMMDLFRGLIIQSGNDASVAIAEHVAGSQDAFVGLMNSWAKKLNMNNS 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGT 209
            F NAHG+     Y+T  D+A+L   +  D P     +  K          N N     +
Sbjct: 121 RFANAHGLDHDDLYSTPYDIALLGQALIRDLPDIYPLYSEKSFTYNNITQRNRNGLLHDS 180

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
            +  DGMKTG+T  +G+++ +SA +GD  LIAV++G      R   S  LL+ GF     
Sbjct: 181 SMNVDGMKTGYTGGAGYSLASSATEGDMRLIAVVMGTKSPKIRQAESKQLLNYGFRFFDT 240

Query: 270 RKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                   +   +        +V     E         +        +         EK 
Sbjct: 241 VSPHKAGDEIMTERIWMGDKEQVKLGVAETSYVTLSRNDVKKMTASVEMTGQLEAPIEKG 300

Query: 327 TLLKNKIT 334
             +   I 
Sbjct: 301 QQVGKVIY 308


>gi|255744731|ref|ZP_05418682.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholera CIRS 101]
 gi|262161135|ref|ZP_06030246.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae INDRE 91/1]
 gi|255737762|gb|EET93156.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholera CIRS 101]
 gi|262028885|gb|EEY47538.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae INDRE 91/1]
          Length = 347

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 84/310 (27%), Positives = 143/310 (46%), Gaps = 9/310 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYP 90
           +D ++G V+AE   D   +PASLTK+MT+YV+   +K     L   + ISKNA       
Sbjct: 1   MDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPD 60

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S    + G+T+ + +  + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +
Sbjct: 61  SSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNS 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGT 209
           HF N+HG+     Y+T  D+A+L   +  D P+    +  +     G    N N      
Sbjct: 121 HFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDK 180

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
            +  DG+KTG T  +G+N+V+SA +G+  L+AV++G  + N R   S  LLS GF     
Sbjct: 181 SMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFET 240

Query: 270 RKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                       +  +  +       + ++   T       +       +K+      +K
Sbjct: 241 VAPHKAGETFVNETIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKK 299

Query: 326 ITLLKNKITK 335
             ++     +
Sbjct: 300 GDIVGTLYYQ 309


>gi|71083689|ref|YP_266409.1| serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71062802|gb|AAZ21805.1| serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 383

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 13/325 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A   K     L D  +G ++ E   D    PAS+TK+MTA + F  ++     L   
Sbjct: 19  ANAAFDVKARTAILQDYLSGEILFEKDADKSIYPASMTKIMTAIIAFDLIRSGDLSLDEK 78

Query: 80  ITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
             +S+NA        S+     G  ++++N LK +I+ S ND  VA+AE +  TE +F  
Sbjct: 79  FLVSENAWRLSSAGYSSMFIMVGDEVSVENLLKGIIIASGNDACVALAEGIAGTEDEFAV 138

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M   +K +G++ T+F N+ G+    + +T RD+ ++S  +  +FP+   YF  K     
Sbjct: 139 MMTAKAKEIGMNNTNFANSSGINDTENLSTVRDIMLMSNYLIKEFPEEYKYFAEKEFTWN 198

Query: 197 -----GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     N N  +   LGADG+KTG+     +++ +S  +  + LIAV  G   +N 
Sbjct: 199 RTGGDPITQGNRNPLLYKSLGADGIKTGYLAVEKYSLASSVERNGRRLIAVGSGFNTKND 258

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R++ SA LL+ G  N    +           D +          I  ++  T  +     
Sbjct: 259 RSRESAKLLTWGLTNFDLVEITKANTPIEDIDVWLGKKDTVKTYIKNDIYKTIPKAKKRL 318

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            ++    +        +K  +L   
Sbjct: 319 LKVSLNYN-GPIQAPIKKDDILGKL 342


>gi|17545046|ref|NP_518448.1| penicillin-binding transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17427336|emb|CAD13855.1| probable penicillin-binding (d-alanyl-d-alanine carboxypeptidase)
           transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 397

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 82/321 (25%), Positives = 148/321 (46%), Gaps = 15/321 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + L D  +G V+     D    PASLTKLMTAY+    +++ K      +T ++
Sbjct: 38  QVAARAWMLTDVTSGQVLGGGNVDERIEPASLTKLMTAYLAVEAVRDGKLKYDQMLTPTE 97

Query: 85  --NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
              + +   S    + G  +++ + L+ LIV+S ND A+ +AE++  TE  FV  MN  +
Sbjct: 98  TVRSVKTDESRMFLQPGKPVSVRDLLQGLIVQSGNDAALVLAEAVGGTETNFVMLMNREA 157

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           + LG+  THFMNA G+    HYTTARD++IL+  +  DFP+   ++  K       K PN
Sbjct: 158 ERLGMKGTHFMNAAGLPDPNHYTTARDLSILTAALIRDFPEDYKFYSQKEFTYNNIKQPN 217

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNKV 255
            N  +      DG+KTG T ++G+ ++ SA +         + L++V++G      R + 
Sbjct: 218 RNRLLWIDPTVDGVKTGHTKSAGYCLITSAKRPLPDVPNASRRLLSVMIGTKSEQVRTQE 277

Query: 256 SASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQ 309
           S  +L+ G+      +           D Y+         ++E+  +   +         
Sbjct: 278 SLKVLNYGYQFFDTLRLYEAKQALQTPDVYKGQAKTVKLGVAEDKWITVPKGSGGRLKPV 337

Query: 310 MKEAKDKESHFIDFEKITLLK 330
           ++  +   +     +++  +K
Sbjct: 338 LERKEPLIAPIAQGQQLGTVK 358


>gi|163733947|ref|ZP_02141389.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter
           litoralis Och 149]
 gi|161393058|gb|EDQ17385.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseobacter
           litoralis Och 149]
          Length = 511

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 6/324 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L   A+  +  I P  + A         ++D  TG V+     D   +PASLTK+MT Y+
Sbjct: 37  LYAFAVLWMLVILPLSAAAAPYAA---FVMDARTGEVLHSRNADTRLHPASLTKMMTLYI 93

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  ++  +  L T + IS+ A+  PPS    K G  +     ++   +KSAND A AI 
Sbjct: 94  AFQAVENGEISLDTKVKISRFAASEPPSKLGLKSGQRIAFRYLIRAAAIKSANDAATAIG 153

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E+L  +E  F + M  T+K LG++ T F NAHG+ + GH +TARDM++L   +  D+P+Y
Sbjct: 154 EALEGSEAAFARRMTRTAKELGMTRTTFKNAHGLTESGHMSTARDMSLLGRHVLYDYPEY 213

Query: 185 MHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            + F  +      +   NTN   +  + GADG+KTG+T A+GFN+VASA +G + +IA +
Sbjct: 214 YNLFSRRSTHAGVRDVANTNRRLLAAYRGADGIKTGYTRAAGFNLVASAERGQERIIATV 273

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE- 302
            G      RN   A LL MGF     R  +    K  Y  +      + +    + + + 
Sbjct: 274 FGGTSTIARNARVAELLDMGFKRAPSRATVRKPQKPSYFASSRQGTRDATIMTASLRPQI 333

Query: 303 -IINYNTQMKEAKDKESHFIDFEK 325
                +  +    + E      E+
Sbjct: 334 RPTVASAAVASPVNAEDIIAAVEE 357


>gi|332798926|ref|YP_004460425.1| Serine-type D-Ala-D-Ala carboxypeptidase [Tepidanaerobacter sp.
           Re1]
 gi|332696661|gb|AEE91118.1| Serine-type D-Ala-D-Ala carboxypeptidase [Tepidanaerobacter sp.
           Re1]
          Length = 415

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 16/339 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++ +   ++   F   +       +       L+D +TG V+ E        PAS TK+M
Sbjct: 14  VLFLFSFLIPISFANGAEQTESLPSISGETGILIDASTGKVLYEKNAYTRMEPASTTKIM 73

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +           L+  +T  K  +    +    ++G  +TL+  L  +++ S ND A
Sbjct: 74  TAILALEK-----GNLSDVVTTGKQPTLADGTRIYLEEGEQLTLEQMLYGMMLNSGNDAA 128

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AIAE +  + + FV+ MN  ++ +G   T F+N +G+   GH TTA D+A++S     +
Sbjct: 129 IAIAEHIGGSVEAFVEMMNEKAREIGAKDTTFVNPNGLPAKGHLTTAYDLALISRYALLN 188

Query: 181 FPQYMHYFQIKGLEIKGK------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            P++      K  EI  +      +  N N  +  + GADG+KTG+T  +G  +VASA +
Sbjct: 189 LPEFRKIVSTKNAEIPWQAQDSDRQLINLNKLLWNYEGADGVKTGYTSTAGSTLVASATR 248

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
               LI+VIL +   N     SA+LL  GF N   +  ++       ++    +   +  
Sbjct: 249 NGWQLISVILKSDAINV-WHDSAALLDYGFTNFERKNILSENTLITEEKVKYGDSIGLLA 307

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                     N     ++            K  +L   I
Sbjct: 308 NTSFITVLPKNGPDVTQKVVINPDIKAPVIKGEILGQVI 346


>gi|167567676|ref|ZP_02360592.1| family S11 unassigned peptidase [Burkholderia oklahomensis EO147]
          Length = 328

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 11/275 (4%)

Query: 2   RQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           R+ L  + +   S        S A   +   + ++D ++G  +AE+       PASLTKL
Sbjct: 23  RRILGAMLVVATSIAANGAQASPAPQIQAVSWLVVDADSGKTLAEHNVSARREPASLTKL 82

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSA 116
           MTAY+    LK+        + I+ +      +         G  + + + ++ LIV SA
Sbjct: 83  MTAYLALDALKQGTLRWDEKVEIAADDIASVGNDEARMYLAPGQRVQVRDLVRGLIVASA 142

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+ +A+ +  +   F + MN+ ++ LG+  +HF++  G+    HY+TA D++IL+  
Sbjct: 143 NDAALVLAKRIGGSPAGFAKRMNDAAQRLGMRDSHFVSPSGITTPDHYSTAHDLSILARH 202

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG- 235
           +  DFP++  +   +  E       N N  +      DGMKTG T A+G+ +V +A +G 
Sbjct: 203 LNQDFPEFYTFSSQQHFEYGKFAKTNKNRLLRADPTVDGMKTGHTNAAGWCMVVTAKRGV 262

Query: 236 -----DQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                   +IAV+LG      R   +  LL  GF 
Sbjct: 263 AGSHAKHRVIAVLLGEPTEKQRLADAKRLLDWGFA 297


>gi|158422626|ref|YP_001523918.1| serine-type D-Ala-D-Ala carboxypeptidase [Azorhizobium caulinodans
           ORS 571]
 gi|158329515|dbj|BAF87000.1| serine-type D-Ala-D-Ala carboxypeptidase [Azorhizobium caulinodans
           ORS 571]
          Length = 512

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 105/302 (34%), Positives = 169/302 (55%), Gaps = 1/302 (0%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +LS      +   +       L++ +TG V+ +     PW PAS+TKLMT YV  + +KE
Sbjct: 61  LLSATALLCAAGASVNAAPVLLVEADTGRVLEQQDAGKPWYPASVTKLMTVYVALNAVKE 120

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +    + +T+S  A+   PS   FK G+ +TL+NAL++L+VKSAND+AV IAE +  + 
Sbjct: 121 GRISFDSLLTVSPLAASQQPSKMGFKPGTQLTLENALRMLMVKSANDMAVVIAEGVGGSM 180

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             FV+ MN+T++ LG++ TH+ N +G+   G  TTARD+A+L+  +   FP+    F+I 
Sbjct: 181 PAFVEEMNDTAERLGMAGTHYNNPNGLPDPGQITTARDLAVLARALIYHFPEQETLFRIP 240

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
            + +    Y N N  +  + GADGMKTGF C++GFN+VA+A +G++ LIAVILGA     
Sbjct: 241 AMRLGKVVYRNYNRLIDRYPGADGMKTGFICSAGFNLVATATRGNKRLIAVILGAPSAVA 300

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           R + +A LL  GF   +     +        Q+   E  ++   +C  +++ +    +  
Sbjct: 301 RTEQAAMLLEKGFQ-PSWSIFASAAPTLNSIQDTGGEPTDMKPYICGGKRKELASENEDD 359

Query: 312 EA 313
             
Sbjct: 360 AI 361


>gi|260574206|ref|ZP_05842211.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sp. SW2]
 gi|259023672|gb|EEW26963.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sp. SW2]
          Length = 548

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 93/265 (35%), Positives = 142/265 (53%), Gaps = 6/265 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  L+   + + + + P  +           ++D  TG  I     D   +PASLTK++T
Sbjct: 10  RNLLLTSFVLVCAFVSPAGAAP-----YAAIVIDARTGETIYAKNADTRLHPASLTKMLT 64

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  ++  +  L T +T+SK+A+  PPS    + G  + L   ++   +KSAND A 
Sbjct: 65  LYITFGAIERGEISLDTMVTVSKHAASEPPSRLGLRAGQKIALRYLIRAAAIKSANDAAT 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           AI E++  +E KF + MN T+K LG+  + F NA+G+   GH +TARDM  L   +  DF
Sbjct: 125 AIGEAVGGSEAKFAERMNRTAKALGMRNSTFRNANGLTTPGHMSTARDMTTLGRHLFYDF 184

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           PQY + F  +  +    +  NTN      + GADG+KTG+T  +GFN+ ASA +G++ +I
Sbjct: 185 PQYYNIFSRRSSDAGVAEVANTNRRFLDMYEGADGIKTGYTAPAGFNLTASAQRGNKRII 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFY 265
           A I G      RN   A LL +GF 
Sbjct: 245 ATIFGGTSTAMRNAKMAELLDLGFA 269


>gi|220926670|ref|YP_002501972.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Methylobacterium nodulans ORS 2060]
 gi|219951277|gb|ACL61669.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Methylobacterium nodulans ORS 2060]
          Length = 403

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 11/320 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
               ++ P+  L+D ++G V+ E   D P++PAS+ KLMT  V+F  +++ +    +   
Sbjct: 31  QGFQSQAPHAILVDADSGSVLYEKAADEPFSPASMAKLMTVEVIFDEMRKGRLNQDSEFP 90

Query: 82  ISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           IS+NA     +     +   +  S + L + L+ LIV+S ND A+A AE++  TE  F Q
Sbjct: 91  ISENAWRRGGAGGGGSSMFAQLNSKVKLPDLLRGLIVQSGNDAAIAAAEAIGGTEDNFAQ 150

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LGL+ + F NA G        TARD+A L+  +   +P+    F  +     
Sbjct: 151 IMNRRARELGLTRSTFRNATGYSAPDQKVTARDLAKLAIHLIETYPEEYKLFAEREFTWN 210

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             +  N N  +   +GADG+KTG+   SG+ +  SA+Q  Q L+ V+ G      R   +
Sbjct: 211 KIRQQNRNPLLAMDIGADGLKTGYLEESGYGLTGSAVQNGQRLVMVVSGLKTARERAAEA 270

Query: 257 ASLLSMGFYNKTDRKKINYIIKDF------YQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             LL  GF     R+                ++     V      V   +        ++
Sbjct: 271 RKLLDWGFRAFEARQVFAPGETVAEADTYGGEKGKVALVAKKPVRVLLPRGSADRLTARV 330

Query: 311 KEAKDKESHFIDFEKITLLK 330
                  +   +  ++  LK
Sbjct: 331 VYQGPLMAPVAEGREVARLK 350


>gi|148554284|ref|YP_001261866.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingomonas wittichii
           RW1]
 gi|148499474|gb|ABQ67728.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingomonas wittichii
           RW1]
          Length = 326

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 90/274 (32%), Positives = 144/274 (52%), Gaps = 11/274 (4%)

Query: 3   QFLVIIAMAMLSNIFPFL----SIAETNKLP-------YYTLLDTNTGHVIAENYPDHPW 51
           ++L  +A+A+  ++ P      + A                L+D +T  ++    P    
Sbjct: 8   RWLACLALALPMSVMPLPWAVSTTAPAEAASPLGAPRFSAVLMDADTNEILYAEQPTAIR 67

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
           +PAS+TK+MT Y+VF  L   +  L   + +S  A+   PS      G ++++ +A+ ++
Sbjct: 68  HPASITKVMTLYLVFDALDAGRLKLDDRVVMSPLAASQRPSKLGLGIGQSLSVADAISVV 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            VKSAND+AVA+AE +  TE  F + M   ++ LG+  T F NA G+   GH+T+A+D+A
Sbjct: 128 AVKSANDVAVALAEKIGGTEANFARMMTAKARQLGMRQTVFANASGLPNPGHFTSAQDIA 187

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
           ILS  +  + P   H F  +       +  N N  +G   G DG+KTGFT  SGF + AS
Sbjct: 188 ILSAAMIRNHPARYHCFSEQSFSYGKLRMANHNKLLGNVPGVDGIKTGFTNDSGFTLTAS 247

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A++    LIAV+LG+     R++   SLL+ GF 
Sbjct: 248 AVRNGHRLIAVVLGSPSGWQRDRDITSLLNAGFT 281


>gi|220927940|ref|YP_002504849.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
 gi|219998268|gb|ACL74869.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
          Length = 401

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/322 (23%), Positives = 135/322 (41%), Gaps = 12/322 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           + A         ++D  +G V+ E       + AS TK+MTA V      +        +
Sbjct: 50  NQAPRVSAGAAIVMDVQSGRVLYEKNAYKRSSIASTTKIMTAIVALENGSDG-----EDV 104

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +SK A+    S    K G    L N L  L+++S ND A+AIAE +  + + F + MN 
Sbjct: 105 IVSKKAASIWGSRVGLKMGKIYKLGNLLNALMIRSGNDAAIAIAEHVGGSVEAFAEMMNR 164

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +  +G + T+F+  HG+    HY+T  D+A+++     +  ++      K    +G   
Sbjct: 165 KAAEIGATNTNFVTPHGLDAPQHYSTPYDLALITQYALKN-KKFCKIVSTKSSTFEGNPI 223

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  +  + GADG+KTG+T  +G  +V SA      +I+V+L    R+ R + S  LL
Sbjct: 224 NNTNEMLSLYPGADGVKTGYTGQAGRCLVTSATHSGWRIISVVLNCSTRSVRAQSSKILL 283

Query: 261 SMGFYNKTDRKKINYIIKDFY----QQNLSNEVPNISEEVCTTQKE--IINYNTQMKEAK 314
              F N    + +    +       +   +       +++    K+        +    K
Sbjct: 284 DYAFGNYKIYEYLKKGGQISQVGIHKGLSNAVGICSDKDISIPLKKDEADRIKVEYDIPK 343

Query: 315 DKESHFIDFEKITLLKNKITKK 336
             E+      +I  +   +  K
Sbjct: 344 TLEAPIQKGCRIGTVNYVLDGK 365


>gi|91763271|ref|ZP_01265235.1| serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91717684|gb|EAS84335.1| serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 393

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 13/325 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A   K     L D  +G ++ E   D    PAS+TK+MTA + F  ++     L   
Sbjct: 29  ANAAFDVKARTAILQDYLSGEILFEKDADKSIYPASMTKIMTAIIAFDLIRSGDLSLDEK 88

Query: 80  ITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
             +S+NA        S+     G  ++++N LK +I+ S ND  VA+AE +  TE +F  
Sbjct: 89  FLVSENAWRLSSAGYSSMFIMVGDEVSVENLLKGIIIASGNDACVALAEGIAGTEDEFAV 148

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M   +K +G++ T+F N+ G+    + +T RD+ ++S  +  +FP+   YF  K     
Sbjct: 149 MMTAKAKEIGMNNTNFANSSGINDTENLSTVRDIMLMSNYLIKEFPEEYKYFAEKEFTWN 208

Query: 197 -----GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     N N  +   LGADG+KTG+     +++ +S  +  + LIAV  G   +N 
Sbjct: 209 RTGGDPITQGNRNPLLYKSLGADGIKTGYLAVEKYSLASSVERNGRRLIAVGSGFNTKND 268

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYN 307
           R++ SA LL+ G  N    +           D +          I  ++  T  +     
Sbjct: 269 RSRESAKLLTWGLTNFDLVEITKANTPIEDIDVWLGKKDTVKTYIKNDIYKTIPKAKKRL 328

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
            ++    +        +K  +L   
Sbjct: 329 LKVSLNYN-GPIQAPIKKDDILGKL 352


>gi|167572961|ref|ZP_02365835.1| family S11 unassigned peptidase [Burkholderia oklahomensis C6786]
          Length = 328

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/275 (27%), Positives = 130/275 (47%), Gaps = 11/275 (4%)

Query: 2   RQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           R+ L  + +   S        S A   +   + ++D ++G  +AE+       PASLTKL
Sbjct: 23  RRILGAMLVVATSIAANGAQASPAPQIQAVSWLVVDADSGKTLAEHNVSARREPASLTKL 82

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSA 116
           MTAY+    LK+        + I+ +      +         G  + + + ++ LIV SA
Sbjct: 83  MTAYLALDALKQGTLRWDEKVEIAADDIASVGNDEARMYLAPGQRVQVRDLVRGLIVASA 142

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+ +A+ +  +   F + MN+ ++ LG+  +HF++  G+    HY+TA D++IL+  
Sbjct: 143 NDAALVLAKRIGGSPAGFAKRMNDAAQRLGMRDSHFVSPSGITTPDHYSTAHDLSILARH 202

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG- 235
           +  DFP++  +   +  E       N N  +      DGMKTG T A+G+ +V +A +G 
Sbjct: 203 LNQDFPEFYTFSSQQHFEYGKFAKTNKNRLLRADPTVDGMKTGHTNAAGWCMVVTAKRGV 262

Query: 236 -----DQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                   +IAV+LG      R   +  LL  GF 
Sbjct: 263 AGSHAKHRVIAVLLGEPTEKQRLADARRLLDWGFA 297


>gi|116751475|ref|YP_848162.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Syntrophobacter fumaroxidans MPOB]
 gi|116700539|gb|ABK19727.1| penicillin-binding protein 6. Serine peptidase. MEROPS family S11
           [Syntrophobacter fumaroxidans MPOB]
          Length = 462

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 140/259 (54%), Gaps = 1/259 (0%)

Query: 8   IAMAM-LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +A+A+ + ++   L+   T       ++D + G V+ E   D    PAS+TK++T Y+VF
Sbjct: 12  LALALSVVSVQSVLAAPFTVNARSAMVVDMSNGVVLYEKNADDLIAPASITKVLTLYIVF 71

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             ++E +  L   + IS  A++   S    K G+ ++L+  +K + V S ND  VA+AE 
Sbjct: 72  DAIREGRIRLDDRVEISSRAAKTTGSRMGVKAGTRVSLEELIKGMAVVSGNDACVAVAEH 131

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +    + FV+ MN  ++ LG++++ FM  +G+   G  TTARD+A LS      FP  + 
Sbjct: 132 ISGNVEAFVRKMNAKARELGMNSSRFMTPNGLPAKGQLTTARDIARLSIAYLRRFPDSLT 191

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              ++        + N N  + T  G DG+KTGF CASG+NI A+A +G+  ++AV+LGA
Sbjct: 192 IHSMQAYSYGTSSHHNANRLLATCPGVDGLKTGFVCASGYNITATARRGNTRILAVVLGA 251

Query: 247 LDRNTRNKVSASLLSMGFY 265
                R + +  LL  GF 
Sbjct: 252 PTPGVRLRETTKLLEAGFA 270


>gi|239904889|ref|YP_002951627.1| putative D-alanyl-D-alanine carboxypeptidase [Desulfovibrio
           magneticus RS-1]
 gi|239794752|dbj|BAH73741.1| putative D-alanyl-D-alanine carboxypeptidase [Desulfovibrio
           magneticus RS-1]
          Length = 386

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/248 (35%), Positives = 138/248 (55%), Gaps = 1/248 (0%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++     +    L + NTG V+ E  PD    PASLTK++T Y++F  +++ +     
Sbjct: 110 ACAVGSPLTVKSAILWNMNTGEVLYEQNPDVQIPPASLTKVLTLYILFDAIRQGRLRPWD 169

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQH 137
            I +S  A+    SN   + G  + + + +K + V SAND  +AIA++L     + FV  
Sbjct: 170 VIEVSPRAATQGGSNMRLRPGEQVKVTDLIKGIAVASANDACMAIADNLENGNAEAFVAL 229

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN+T+K LG++ + F N +G+   G  TTARDM  L+      FP+ +    ++      
Sbjct: 230 MNDTAKRLGMTNSVFFNPNGLPADGQVTTARDMLKLAAAYLEQFPKSLTIHSMQFFTHNN 289

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           ++  N N  +G + G DG+KTGF CASG+NIVA+A++GD  LIAV+LG+ +   R + +A
Sbjct: 290 RQRHNANSLLGRYEGVDGLKTGFVCASGYNIVATAMRGDTRLIAVVLGSRNPRVRERETA 349

Query: 258 SLLSMGFY 265
            LL  GF 
Sbjct: 350 KLLDKGFK 357


>gi|269138268|ref|YP_003294968.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda EIB202]
 gi|267983928|gb|ACY83757.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda EIB202]
 gi|304558304|gb|ADM40968.1| D-alanyl-D-alanine carboxypeptidase [Edwardsiella tarda FL6-60]
          Length = 387

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/326 (28%), Positives = 143/326 (43%), Gaps = 12/326 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             F  +        + L+D  TG ++A   PD   NPASLTKLMT YVV   L + +  L
Sbjct: 22  MAFPLVPPHIDAASWVLMDAQTGQILAAGNPDARRNPASLTKLMTNYVVEQALDQGRIGL 81

Query: 77  TTPITISKNASEYP------PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
              ++I  +A           S    K G   T+ + ++ +I+ S ND  VA+++ +   
Sbjct: 82  NDRVSIGDDAWATRNPLFKGSSLMFLKPGDRATVSDLIRGIIIDSGNDACVALSDYVSGD 141

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           +  FV+ MN     L L  THF   HG+   G Y++ARD+A+L+  I T    Y H++  
Sbjct: 142 QADFVRQMNADVSALHLQNTHFETVHGLDAPGQYSSARDLALLARAIITHEQPYYHFYAE 201

Query: 191 KGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA-SAIQGDQSLIAVILGALD 248
           K L   G    N N       L  DGMKTG T ++GFN+VA S     Q LIAV++GA  
Sbjct: 202 KSLSWNGVTQNNRNGLLWDQDLHVDGMKTGHTASAGFNLVATSVDARGQRLIAVVMGADS 261

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS----EEVCTTQKEII 304
              R + +  LL  G  N    +          QQ    +   ++    + +  T  +  
Sbjct: 262 SRGREQQAKKLLLWGERNFETVQLAASDSAVTRQQVRYGQQQTVALGNPQNIYYTLPKGE 321

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLK 330
             + +++     +       K  ++ 
Sbjct: 322 LRDVKVEYTLSHDYLKAPLAKGEVVG 347


>gi|160942230|ref|ZP_02089539.1| hypothetical protein CLOBOL_07116 [Clostridium bolteae ATCC
           BAA-613]
 gi|158434787|gb|EDP12554.1| hypothetical protein CLOBOL_07116 [Clostridium bolteae ATCC
           BAA-613]
          Length = 453

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/333 (26%), Positives = 143/333 (42%), Gaps = 14/333 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +        A     P   L++ +TG VI E   D   +PAS+TK+MT  ++F  L+  K
Sbjct: 80  AAPADQSQAAVQIAAPSAILMEASTGQVIYEKDADEKRSPASVTKVMTLILIFDALQSGK 139

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             LT  +  S +A     S    ++G   T++  +K +++ S ND +VA+AE +  +E +
Sbjct: 140 IQLTDEVVTSAHAKSMGGSQVFLEEGEKQTVETLIKCIVIASGNDASVAMAEYIAGSEDE 199

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           FV+ MN  + +LG+S THF++  G+     HYTTARD+AI+S  +   +PQ  +Y  I  
Sbjct: 200 FVRMMNERAASLGMSNTHFVDCCGLTESPDHYTTARDIAIMSRELINKYPQIHNYSTIWM 259

Query: 193 LEIKGKK--------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             I              NTN    + T     G+KTG T  + + + A+A +    LIA 
Sbjct: 260 ENITHVTKQGTKEFGLSNTNKLLKMATNFTVTGLKTGSTSIAKYCLSATAEKDGVRLIAA 319

Query: 243 ILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I+ A D   R   + +LL+ G+ N     D++ +                          
Sbjct: 320 IMAAPDFKARFADAQTLLNYGYANCKLYEDKEHLPLPQMPVTGGVEDEVGLTYEGTFSYL 379

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +  +     K+    ES     E        
Sbjct: 380 SLKGEDLGAIEKKLVLLESVPAPVEPGQKAGVL 412


>gi|323705335|ref|ZP_08116910.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535237|gb|EGB25013.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 381

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/351 (23%), Positives = 143/351 (40%), Gaps = 25/351 (7%)

Query: 1   MRQFLVIIAMAML----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ LV++ +       +NI                ++D  +G ++ E         AS 
Sbjct: 1   MKKILVLVLIFTFLMTPTNIEAENLKPPQIAAKAAIVMDQKSGRILFEKNISEKLPMAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT  +   +       L   +T+SK A+    S+     G  +++ N L  L++ S 
Sbjct: 61  TKIMTLLLALEY-----GNLNDIVTVSKKAASVGGSSIWLSPGEKISMINLLYGLMLNSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILS 174
           ND A AIAE +  +  KFV+ MN  +K +G   T+F+   G+      HYTTA D+A+++
Sbjct: 116 NDAATAIAEHISGSVDKFVELMNKKAKEIGAYNTNFVTPSGLDIGIDNHYTTAYDLALIT 175

Query: 175 WRIKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
                ++ ++      K   I        +   N N  +  + GADG+KTGFT  +G  +
Sbjct: 176 RYAFNNYNKFAEIVSTKEKTIPWDGKEYDRYLRNKNKMLWQYEGADGVKTGFTNKAGRCL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQN 284
           VASA +  Q LI+V+L +       + +  +L   F N T  K I+              
Sbjct: 236 VASASRNGQRLISVVLNSG---PMWEDTQKILDYSFANYTPIKIISKGQMIKTISVVSGK 292

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                   + +      +    N ++  +  K S          +   I K
Sbjct: 293 EKYLPLVYNSDFILPISKDEEINVKIDYSLPK-SVKAPIGIGEKMGVAIVK 342


>gi|114765840|ref|ZP_01444933.1| D-alanyl-D-alanine carboxypeptidase family protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114541839|gb|EAU44876.1| D-alanyl-D-alanine carboxypeptidase family protein [Roseovarius sp.
           HTCC2601]
          Length = 486

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 94/260 (36%), Positives = 142/260 (54%), Gaps = 1/260 (0%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  +G V+     D P +PASLTK+MT Y+ F  ++  +  + T +TIS+N
Sbjct: 5   AAPYAAMVVDARSGEVLHSENADTPLHPASLTKMMTLYLAFEAVEHGELTMDTVVTISRN 64

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+  PPS    + G  + L   ++   VKSAND A AI E++  +E  F + MN T+K +
Sbjct: 65  AAAEPPSKLGLRSGQKIKLRYLVRAAAVKSANDAATAIGEAISGSEAAFARRMNRTAKAM 124

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G+S T F NA+G+ + GH +TARDM +L   +  D+PQY + F          +  NTN 
Sbjct: 125 GMSRTTFKNANGLTETGHMSTARDMTLLGRHMIYDYPQYYNLFSRITTHAGMHEVYNTNR 184

Query: 206 AV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
              G + GADG+KTG+T A+GFN+VASA +G + ++  + G     +RN   A L+ +GF
Sbjct: 185 RFLGAYKGADGIKTGYTRAAGFNLVASAERGSERVVTTVFGGRSTASRNAKVAELMDLGF 244

Query: 265 YNKTDRKKINYIIKDFYQQN 284
                R  +    K  Y  N
Sbjct: 245 KRAKTRVALRAPGKPPYLGN 264


>gi|325519264|gb|EGC98711.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. TJI49]
          Length = 354

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 14/320 (4%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK--NASE 88
           + L+D  +  V+A    D    PASLTKLMTAY+VF  L +KK  +   +T S+      
Sbjct: 1   WVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEALDKKKISMEQIVTPSEAVRRVG 60

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    +    +++ + +  +I++S ND A+A+AE +  +E +FV  MN+ ++ LG+ 
Sbjct: 61  RDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEAQFVTMMNDEAQRLGMK 120

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            THF + +G+    HYTTA D+A LS  +  DFPQY   F  K  +    +  N N  + 
Sbjct: 121 GTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYGIFSEKEFKYNNIRQGNRNRLLW 180

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQ------GDQSLIAVILGALDRNTRNKVSASLLSM 262
                DG+KTG T A+G+ ++AS+ +      G + L++V++G    + R + S  +L+ 
Sbjct: 181 LDPTVDGLKTGHTQAAGYCLIASSKRAIPGSDGQRRLVSVMMGEQKESDRTQDSMKMLNY 240

Query: 263 GFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDK 316
           G+      +             Y+   +     +  +  V   +        ++      
Sbjct: 241 GYSAFDAVRLFKGGQAISTPRLYKGKENTVQVGVKSDQWVTVPRGLGDKVKPEVDVNAPL 300

Query: 317 ESHFIDFEKITLLKNKITKK 336
            +   + +++  +K     K
Sbjct: 301 IAPLAEGQQVGTVKIVADGK 320


>gi|261212007|ref|ZP_05926293.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC341]
 gi|260838615|gb|EEX65266.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC341]
          Length = 347

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 9/310 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYP 90
           +D ++G V+AE   +   +PASLTK+MT+YV+   +K     L   + ISKNA       
Sbjct: 1   MDYHSGKVLAEKEMNTKLSPASLTKMMTSYVIGQEIKRGNISLNDDVVISKNAWAKNFPD 60

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S    + G+T+ + +  + +I++S ND  VA+AE +  +E  FV  MN  + +LG+  +
Sbjct: 61  SSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGSEDAFVDLMNAWASSLGMKNS 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGT 209
           HF NAHG+     Y+T  D+A+L   +  D P     +  +     G    N N      
Sbjct: 121 HFTNAHGLDNPNLYSTPYDLALLGQALIRDVPDEYAIYSEQKFTYNGITQYNRNGLLWDK 180

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
            +  DG+KTG T  +G+N+V+SA +G+  L+AV++G    N R   S  LL  GF     
Sbjct: 181 SMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDSENARKAESKKLLGYGFRFFET 240

Query: 270 RKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                       +  +  + +     + ++   T       +       +KE      +K
Sbjct: 241 VAPHKAGETFVNEAIWMGDKNTVALGVDKDTYVTLPRGQAKDLTASFVLEKE-LKAPLKK 299

Query: 326 ITLLKNKITK 335
             ++     +
Sbjct: 300 GDVVGTLYYQ 309


>gi|238918925|ref|YP_002932439.1| D-alanyl-D-alanine carboxypeptidase DacD [Edwardsiella ictaluri
           93-146]
 gi|238868493|gb|ACR68204.1| D-alanyl-D-alanine carboxypeptidase DacD [Edwardsiella ictaluri
           93-146]
          Length = 387

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 92/326 (28%), Positives = 142/326 (43%), Gaps = 12/326 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             F  +        + L+D  TG ++A   PD   NPASLTKLMT YVV   L + +  L
Sbjct: 22  MAFPLVPPHIDAASWVLMDAQTGQILAAGNPDARRNPASLTKLMTNYVVERALDQGRIGL 81

Query: 77  TTPITISKNASEYP------PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
              ++I  +A           S    K G   T+ + ++ +I+ S ND  VA+++ +   
Sbjct: 82  NDRVSIGDDAWATRNPLFKGSSLMFLKPGDHATVSDLIRGIIIDSGNDACVALSDYVSGD 141

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           +  FV+ MN     L L  THF   HG+   G Y++ARD+A+L+  I T    Y H++  
Sbjct: 142 QADFVRQMNAYVNALHLQNTHFETVHGLDAPGQYSSARDLALLARAIITHEQPYYHFYAE 201

Query: 191 KGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA-SAIQGDQSLIAVILGALD 248
           K L   G    N N       L  DGMKTG T ++GFN+VA S     Q LIAV++GA  
Sbjct: 202 KSLSWNGVTQNNRNGLLWDQDLHVDGMKTGHTASAGFNLVATSVDARGQRLIAVVMGADS 261

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS----EEVCTTQKEII 304
              R   +  LL  G  N    +          QQ    +   ++    + +  T  +  
Sbjct: 262 SRGREVQAKKLLLWGDRNFETVQLAASDKAVTCQQVRYGQQQTVALGSPQNIYYTLPKGE 321

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLK 330
             + +++     +       K  ++ 
Sbjct: 322 LRDVKVEYTLSHDYLKAPLAKGEVVG 347


>gi|222087386|ref|YP_002545923.1| D-alanyl-D-alanine carboxypeptidase protein [Agrobacterium
           radiobacter K84]
 gi|221724834|gb|ACM27990.1| D-alanyl-D-alanine carboxypeptidase protein [Agrobacterium
           radiobacter K84]
          Length = 388

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 122/318 (38%), Positives = 186/318 (58%), Gaps = 4/318 (1%)

Query: 3   QFLVIIAMAMLSNIFP--FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +    + +  ++      FLS AE      + L+D NTG V+        W PASLTKLM
Sbjct: 7   RLYAALRLVPMAAAASMLFLSTAEVADANPHVLVDANTGRVLDHQEAFSKWYPASLTKLM 66

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  ++  +  L TP+ +SK AS  P +   FK G  MTLDNALK+++VKSAND+A
Sbjct: 67  TAYVTFRAIQSGQVSLDTPVVMSKLASAQPAAKMYFKPGQKMTLDNALKMMLVKSANDLA 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A++E++  +++ FV  MN  +  LG+  THF+N +G+   G YTTARD+A+LS  ++ +
Sbjct: 127 MAVSETIGGSQQGFVARMNAEAARLGMLDTHFINPNGLPGQGQYTTARDLAVLSVALRRE 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  YF ++G     K+ PN N  +G + GADGMKTGF CA+GFN +ASA +  ++LI
Sbjct: 187 FPQYAGYFSLEGFTNGVKQVPNINMLIGRYDGADGMKTGFICAAGFNQIASATRNGRTLI 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           +V+LG      R   SA+ L  GF N+   K     ++ +       +V +++ E+C+ +
Sbjct: 247 SVVLGTDSLAARADDSANFLEKGFQNQFSGKDTLANLRPYGPGQD--QVADLTAEICSAK 304

Query: 301 KEIINYNTQMKEAKDKES 318
              I   T+ +  + K +
Sbjct: 305 GAKIRSETRDEAGRMKVT 322


>gi|163752391|ref|ZP_02159585.1| D-alanyl-D-alanine carboxypeptidase [Shewanella benthica KT99]
 gi|161327728|gb|EDP98916.1| D-alanyl-D-alanine carboxypeptidase [Shewanella benthica KT99]
          Length = 348

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/313 (28%), Positives = 142/313 (45%), Gaps = 10/313 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYP 90
           +D NTG +IAE       NPASLTK+MT+YV+   +K         +TISK A       
Sbjct: 1   MDYNTGQIIAEENAYESLNPASLTKMMTSYVIGHEIKVGNISPEDEVTISKKAWSKNFPD 60

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S    + G  +T+D+    +I++S ND  VA+AE +  TE  FV  MN+ +  LG+  +
Sbjct: 61  SSKMFIEVGKQVTVDDLNHGIIIQSGNDACVAMAEHIAGTEDGFVDLMNSWAIQLGMKDS 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGT 209
            F N+HG+    H +TA DMA+L   +  D P     ++ K     G K  N N      
Sbjct: 121 FFENSHGLDAKNHKSTAYDMALLGAALIRDVPDEYAVYKQKSFTYNGIKQYNRNGLLWDK 180

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
            +  DG+KTG T  +G+N+V SA +    LI+V++G    N R   S  LL+ GF     
Sbjct: 181 SMNVDGIKTGHTSGAGYNLVTSATKDGMRLISVVMGTKSENARKAESKKLLNYGFRFFET 240

Query: 270 RKKINYII----KDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDF 323
                       +  +  +  +    ++ +  +   + +  N     +  K+  +     
Sbjct: 241 ITPYKAGDSFVSQQIWFGDKESVDLGVTTDTPITINRGQAKNLRANFELTKELTAPLAKG 300

Query: 324 EKITLLKNKITKK 336
           E +  +  ++  K
Sbjct: 301 ETVGRIYFQLNGK 313


>gi|158423796|ref|YP_001525088.1| D-alanyl-D-alanine carboxypeptidase [Azorhizobium caulinodans ORS
           571]
 gi|158330685|dbj|BAF88170.1| D-alanyl-D-alanine carboxypeptidase [Azorhizobium caulinodans ORS
           571]
          Length = 426

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 88/340 (25%), Positives = 147/340 (43%), Gaps = 8/340 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+ +  A+L         A    +P  TL+D  +G ++ E        P  + K+MTA V
Sbjct: 37  LLTVVAALLPLQAARAQTAFQTAVPEATLVDFASGTILFEKNAQGRVAPGGIVKIMTAAV 96

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDI 119
           +F  ++  K  L TP  +S+NA                  S + + + L+  +V S ND 
Sbjct: 97  IFDQIRAGKITLDTPFYVSENAWRRGGGPSGGAAMFVPVKSQVRVGDLLQGALVVSGNDA 156

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+A+AE L  TE +F Q MN  +  LG+S + F NA G      +T ARDMA+L+  I  
Sbjct: 157 AIALAEGLSGTESEFAQRMNAKAAELGMSGSQFRNATGFADPDQFTNARDMAVLARSIIR 216

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + P+    F +  +E    K  N N  +   +GADG+   +   +G+++V SA+QG+Q L
Sbjct: 217 NDPELYKIFAVPDIEWSKIKQRNRNTLLNAGIGADGLHMSWVKDAGYHLVGSAVQGNQRL 276

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEEV 296
           I V++GA     R + +  LL  GF++   +        + +          VP ++   
Sbjct: 277 IVVVMGAKTEKERLEEARRLLEWGFHSFQYKLLFAGDTEVGRASIWGGAVGSVPLVTGSE 336

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +      +    +     K        K T +      +
Sbjct: 337 LSLLLPRNSQEKLVARVSYKGPLRAPVAKGTEVGRLELTR 376


>gi|323701270|ref|ZP_08112945.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533872|gb|EGB23736.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 414

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 89/350 (25%), Positives = 143/350 (40%), Gaps = 22/350 (6%)

Query: 2   RQFLVIIAMAMLS--NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++ L +I +  L   +I    + A         L+D  TG V+          PAS TK 
Sbjct: 6   KKILSVIVIVWLCLGSIPYAWAGAPEISGEAAVLIDAGTGQVLYGKDEHKRMYPASTTKT 65

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +TA V     K     LT  +TI  NA +   ++    +G  + L + L  L++ SAND 
Sbjct: 66  LTALVALEHAK-----LTDLVTIGPNALQAGGTSIGLTEGEKIPLKDLLYALMLNSANDA 120

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VAIAE +  + +KF    N  +K +G   THF N HG+    HY+TA D+A+++ +   
Sbjct: 121 GVAIAEHISGSVEKFAALSNQEAKKIGAKDTHFTNPHGMPDKNHYSTAYDLALIARQAMQ 180

Query: 180 DFPQYM-----HYFQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVA 230
           +          HY   +      K   N N      +  + G  G+KTG+T  +G  ++A
Sbjct: 181 NQEFRRIVSTVHYQVSRADPNAQKYLFNHNKLLWSKIYGYQGTTGVKTGYTVEAGQCVIA 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA +  + LIAV+L +   N     +  LL  GF N   R+ +                 
Sbjct: 241 SAQRDGRELIAVVLHSDGSNI-WSDATKLLDYGFTNFHSRQVVKGGQVMANIPVKYGKSP 299

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           N     S +   T       + Q+     KE       +  +L + +  +
Sbjct: 300 NVDLVASRDFYYTFPLEGADDLQISVQPQKE-VKAPVTRGQVLGSILLSQ 348


>gi|254452232|ref|ZP_05065669.1| D-alanyl-D-alanine carboxypeptidase family protein [Octadecabacter
           antarcticus 238]
 gi|198266638|gb|EDY90908.1| D-alanyl-D-alanine carboxypeptidase family protein [Octadecabacter
           antarcticus 238]
          Length = 450

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 97/276 (35%), Positives = 140/276 (50%), Gaps = 1/276 (0%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +     IA  +      ++D  TG ++     D   +PASLTK+MT Y+ F  ++  +  
Sbjct: 1   MAALAPIAGNSAPYAAMVMDARTGEILHSRNADTQLHPASLTKMMTLYIAFQAIERGEIS 60

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   ITI+  A+  PPS      G  +     ++   VKSAND A AI  +L   E  F 
Sbjct: 61  LDDMITITPVAANEPPSKLGLVAGQRIQFRYLVRASGVKSANDAATAIGIALEGNEAAFA 120

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + M  T++ +G+S T F NAHG+ + GH +TARDM +L   +  DFPQY + F     + 
Sbjct: 121 RRMTATARAMGMSRTTFRNAHGLTESGHLSTARDMTVLGRHMIYDFPQYYNIFSRLTTDA 180

Query: 196 KGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
             ++  NTN      + GADG+KTG+T A+GFN+VASA +G + +IA + G      RN 
Sbjct: 181 GVRQVANTNRRFLSAYRGADGIKTGYTRAAGFNLVASAERGQERIIATMFGGSSTAQRNA 240

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
             A LL MGF        IN       Q + S + P
Sbjct: 241 RVAELLDMGFARAPTTANINRPSPVPAQGSGSPDAP 276


>gi|331089686|ref|ZP_08338584.1| hypothetical protein HMPREF1025_02167 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330404521|gb|EGG84064.1| hypothetical protein HMPREF1025_02167 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 434

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 11/321 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++ +TG V+ E   D    PAS+TK+MT  ++F  ++ KK  L   + +S+
Sbjct: 74  QIGAPSALLMEASTGTVLFEQDADTKRPPASVTKIMTMLLIFDAVESKKISLEDKVPVSE 133

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G T T+D  LK + + SAND  VA+AE +  +E+ FVQ MN  +K 
Sbjct: 134 FAASMGGSQVFLETGETQTVDTMLKCISIASANDACVAMAEYISGSEEAFVQEMNKRAKA 193

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           LG+  T+F+N +G+   GH TTARD+A++S  + T +PQ   Y       I  +      
Sbjct: 194 LGMHNTNFVNCNGLDAQGHVTTARDIALMSRELITKYPQIHEYAMTWMENITHETKKGTS 253

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  V  +  A G+KTG T  + F + A+  + D  LIAV++ A     R   +
Sbjct: 254 EFGLTNTNKLVRQYEYATGLKTGSTGEAKFCVSATGKKDDVELIAVVMAADTSKERFADA 313

Query: 257 ASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             +++ GF      +D K +             N      E+      +  +     K  
Sbjct: 314 VKMMNYGFGKCQVYSDEKPMKTKYAVVKNGVEENIEVERGEKFTYLDVKGKDMKKIKKIE 373

Query: 314 KDKESHFIDFEKITLLKNKIT 334
           K  +       K  ++ + + 
Sbjct: 374 KINKKILAPVRKGDVVGSIVY 394


>gi|229089145|ref|ZP_04220429.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-42]
 gi|228694186|gb|EEL47865.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-42]
          Length = 444

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 144/375 (38%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVNEAVAKGKLKWDQKVKVSEYAYKISQDRSLSNVPLRNGESYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MNN SK LGL    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALAEAIGGKEVDFVKLMNNKSKELGLKNYKFVNSTGLTNKDLKGRHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA---- 206
                  +   ARD+AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTNPDEENKMAARDVAILAQRLIQDFPKTLDTAKISKKTFREGTTDRIDMINWNWMLPGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
              + G DG+KTG T  +G     +  +     I+V++    R+ R   +  L   GF N
Sbjct: 252 SKAYDGVDGLKTGSTPEAGECFTGTIEKDGMRFISVVINTKSRDARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESH 319
              ++          Q+ +  E            + V     +      + +  +  +  
Sbjct: 312 FEMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAVSLPVAKGSKDVYKTELKEANKGQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K  +L   + 
Sbjct: 372 EAPIKKGAVLGQMVI 386


>gi|89074850|ref|ZP_01161304.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium sp. SKA34]
 gi|89049425|gb|EAR54987.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium sp. SKA34]
          Length = 459

 Score =  187 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 6/318 (1%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                   + L+D NTG ++A N  +    PAS TKLM  Y+V   L +    L + + +
Sbjct: 98  PPNLNARAFILIDANTGRIVASNNANMRMAPASTTKLMLMYIVEQKLADGVISLDSKVLV 157

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            + A     S    K GS +++ + ++ +IV+S ND AV +A  +  ++  FV  MN T+
Sbjct: 158 PEVAWRTGGSRMFLKPGSYVSVKDLIQGVIVESGNDAAVTLANYVAGSQSSFVSMMNATA 217

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             LG+  THF    G+    H++TA D+ +L   I  D+PQY H+F  K  E    + PN
Sbjct: 218 VKLGMHNTHFTTVMGLPAPAHFSTAYDLGLLGQHIMNDYPQYFHFFSQKYFEYNHIRQPN 277

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQ--GDQSLIAVILGALDRNTRNKVSASLL 260
            N  + T+  A GMKTG T A+G+++V+SA        L+AV+LG    N     S  L 
Sbjct: 278 FNRLLFTYQYATGMKTGSTEAAGYSLVSSAKMPDNPMKLVAVVLGTQSLNDVAAQSKGLF 337

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           + GF             K      +     N    + + +       ++    +   +  
Sbjct: 338 NYGFRFFKQDTLYAADSKLSEQHVWGGQQDNVSLGLEKPLTLVLPSSVDEKDLLTNLQFD 397

Query: 317 ESHFIDFEKITLLKNKIT 334
                  +K   L     
Sbjct: 398 HDIKAPVDKGEKLGEMTV 415


>gi|118475787|ref|YP_892938.1| D-alanyl-D-alanine carboxypeptidase A [Bacillus thuringiensis str.
           Al Hakam]
 gi|229182408|ref|ZP_04309661.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BGSC 6E1]
 gi|118415012|gb|ABK83431.1| D-Ala-D-Ala carboxypeptidase A, Serine peptidase, MEROPS family S11
           [Bacillus thuringiensis str. Al Hakam]
 gi|228601054|gb|EEK58621.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BGSC 6E1]
          Length = 444

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 144/375 (38%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVNEAVAKGKLKWDQKVKVSEYAYKISQDRSLSNVPLRNGESYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MNN SK LGL    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALAEAIGGKEVDFVKLMNNKSKELGLKNYKFVNSTGLTNKDLKGQHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA---- 206
                  +   ARD+AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTNPDEENKMAARDVAILAQRLIQDFPKTLDTAKISKKTFREGTTDRIDMINWNWMLPGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
              + G DG+KTG T  +G     +  +     I+V++    R+ R   +  L   GF N
Sbjct: 252 SKAYDGVDGLKTGSTPEAGECFTGTIEKDGMRFISVVINTKSRDARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESH 319
              ++          Q+ +  E            + V     +      + +  +  +  
Sbjct: 312 FEMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAVSLPVAKGSKDVYKTELKEANKGQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K  +L   + 
Sbjct: 372 EAPIKKGAVLGQMVI 386


>gi|152973863|ref|YP_001373380.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022615|gb|ABS20385.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 439

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 138/364 (37%), Gaps = 34/364 (9%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L   A    S++    S A   +     L++ ++G ++ +   D     AS+TK+M+ Y+
Sbjct: 18  LFFSAFVTYSSVSAETSSALNIEAGAAILVEADSGKILYQKNADELLAIASMTKMMSEYL 77

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIA 120
           V   +   K      I +S+ A +     S          + T+    + + + SAN   
Sbjct: 78  VHKAVDTGKLKWDQKIKVSEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGAT 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTT 166
           +A+AE++   E  FV+ MN+ +K  GL    F+N+ G+                  +  +
Sbjct: 138 IALAEAVAGKEADFVKMMNDQAKEFGLKNYKFVNSTGLTNKDLKGQHPEGTTPDEENKMS 197

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMK 217
           ARD+AIL+  +  DFP+ +   +I     +       K  N NW     +  + G DG+K
Sbjct: 198 ARDVAILAQHLIQDFPKVLDTAKIPKKVFQEGGKYPVKMDNWNWMLKGLIKQYEGVDGLK 257

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG T  +G     +A +    LI+V++       R   +  L   GF N   +K      
Sbjct: 258 TGSTPEAGDCFTGTAERNGMRLISVVIKTNSHTARFDETKKLFDYGFTNFDVKKVYPKGS 317

Query: 278 KDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                + +  E            + +     +      + +  +  +      +K T L 
Sbjct: 318 SVKGYETVRVENAKDKDVAVETKQAITLPMPKGSKDVYKTEFKEVGKEKEAPIKKGTTLG 377

Query: 331 NKIT 334
             + 
Sbjct: 378 QMVV 381


>gi|323704241|ref|ZP_08115820.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536307|gb|EGB26079.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 457

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 79/351 (22%), Positives = 146/351 (41%), Gaps = 28/351 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ + II + +    F               P   L+D  TG V+ +   +    PAS 
Sbjct: 1   MKKIVSIITVIIFLINFIPKVYGMENPPQIVGPTAVLMDFTTGQVLYDKNMNQRMYPAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK++TA +     K     L   +T++ +      ++     G  +TL+  L  ++++SA
Sbjct: 61  TKILTAIIAIEKGK-----LNDVVTVNDDVKNIDGNSIYLVPGEKLTLEQLLYAMLLESA 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A+A+A+ +  + + F   MN  +K +G   +HF+N +G+    HY+T  DMA+++  
Sbjct: 116 NDAAIAVADHIGGSIQGFANLMNEKAKEIGAKDSHFVNPNGLPNTEHYSTPYDMALIARY 175

Query: 177 IKTD--------FPQYMHYFQIKGLEIKGKKYPNT--NWAVGTFLGADGMKTGFTCASGF 226
              +           Y      K  + +     N         + GADG+KTG+T A+  
Sbjct: 176 AMRNATFRKIVSTIHYQIPPTNKFDKPRDLWISNRLIKPTSFHYDGADGVKTGYTIAANQ 235

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--QN 284
             V SA +    LI+VI+G    N     +  LL+ GF N      +       Y     
Sbjct: 236 VFVGSATRNGHRLISVIMGDEGTNI-WTDTIKLLNYGFNNFDLVNPLEQNSIVTYVDIGK 294

Query: 285 LSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  ++P I+++       + +  +  + +   K+        +K T L + 
Sbjct: 295 VKFKLPLIAKDSFYYVVPKGQENSIKSSISVDKN---INAPVKKGTTLGSI 342


>gi|304316798|ref|YP_003851943.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778300|gb|ADL68859.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 384

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/337 (22%), Positives = 142/337 (42%), Gaps = 22/337 (6%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+                ++D  +G ++ E   +     AS TK+MT  +   +     
Sbjct: 18  INVNAENIEPPQIAAKAAIVMDQKSGRILYEKNINEKLPMASTTKIMTLLLALEY----- 72

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   +T+SK A+    S+     G  ++L + L  L++ S ND A AIAE +  + +K
Sbjct: 73  GNLNDIVTVSKRAASVGGSSIWLAPGEKLSLIDLLYGLMLNSGNDAATAIAEHIGGSVEK 132

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           F + MN  +K++G  +T+F+   G+    + HYTTA D+A+++     ++ ++      K
Sbjct: 133 FAEMMNKKAKDIGAYSTNFVTPSGLDIGINNHYTTAYDLALITRYAFNNYSKFAEIVSTK 192

Query: 192 GLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
              I        +   N N  +  + G DG+KTGFT  +G  +VASA +    LI+V+L 
Sbjct: 193 EKTIPWSGRDYDRYLRNKNKMLWQYEGGDGVKTGFTNKAGRCLVASATRDGHRLISVVLN 252

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTT-- 299
           +       + S  +L   F      K ++                      +++      
Sbjct: 253 SG---PMWEDSQKILDYSFEKYKPLKIVSKCQVLKTISVINGKEKYLPLQYNDDFTLPVS 309

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++EI+N   +    K  ++     EK+ + K  +  K
Sbjct: 310 KEEILNIKVEYNIPKSIKAPIGIGEKVGIAKVLLNDK 346


>gi|196047683|ref|ZP_03114887.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           03BB108]
 gi|225862066|ref|YP_002747444.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           03BB102]
 gi|196021468|gb|EDX60171.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           03BB108]
 gi|225789232|gb|ACO29449.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           03BB102]
          Length = 439

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/375 (20%), Positives = 144/375 (38%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A +     S          + T+    +
Sbjct: 67  ASMTKMMSEYLVNEAVAKGKLKWDQKVKVSEYAYKISQDRSLSNVPLRNGESYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MNN SK LGL    F+N+ G+           
Sbjct: 127 AMAIYSANGATIALAEAIGGKEVDFVKLMNNKSKELGLKNYKFVNSTGLTNKDLKGQHPE 186

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA---- 206
                  +   ARD+AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 187 GTNPDEENKMAARDVAILAQRLIQDFPKTLDTAKISKKTFREGTTDRIDMINWNWMLPGL 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
              + G DG+KTG T  +G     +  +     I+V++    R+ R   +  L   GF N
Sbjct: 247 SKAYDGVDGLKTGSTPEAGECFTGTIEKDGMRFISVVINTKSRDARFDETKKLYDYGFAN 306

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESH 319
              ++          Q+ +  E            + V     +      + +  +  +  
Sbjct: 307 FEMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAVSLPVAKGSKDVYKTELKEANKGQ 366

Query: 320 FIDFEKITLLKNKIT 334
               +K  +L   + 
Sbjct: 367 EAPIKKGAVLGQMVI 381


>gi|302874917|ref|YP_003843550.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium cellulovorans
           743B]
 gi|307690464|ref|ZP_07632910.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cellulovorans
           743B]
 gi|302577774|gb|ADL51786.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium cellulovorans
           743B]
          Length = 403

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 26/352 (7%)

Query: 4   FLVIIAMAMLSNIFPFLS----------------IAETNKLPYYTLLDTNTGHVIAENYP 47
           FLV+I++  L      +                  A   +     L++ NTG V+ E   
Sbjct: 12  FLVLISIFQLFVPKAAIVVFAEEAAVETSAAKDTTAINVEANSALLMEPNTGKVLYEKNI 71

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
              + PAS+TK+MT  +    +   +  LT  IT+S+NA +   S+   + G   T++  
Sbjct: 72  HDKYAPASVTKIMTMLLAMEAIDSGRIKLTDTITVSENAKKMGGSSMILETGEVRTVEEI 131

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           +K + + S ND AVA+AE +  +E+ FV  MN   + LG+  T F N  G+   GH +TA
Sbjct: 132 IKGIAIASGNDAAVAMAEYIGGSEENFVVMMNKKCEELGMKNTTFKNCTGLSADGHLSTA 191

Query: 168 RDMAILSWRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            D++++S  +            +   I        +  N N  V  F G DG+KTGFT  
Sbjct: 192 YDISLMSRELLKHPTILKYSSIYMETISEGRKTPIELVNHNKLVRFFKGCDGLKTGFTSE 251

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD---- 279
           + + I A+A +    +++VI+GA     RN+ ++ L++ GF     +  +    +     
Sbjct: 252 AKYCISATATRDGVRMLSVIMGAPTFKVRNRDASMLMNYGFSKFESKVIVKKDDEVDKVS 311

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
           F ++     +    +EV    ++  N  T  K   +   +  + ++  ++  
Sbjct: 312 FDKKGDKFLMAKSCDEVRVVVEKGGNIETTKKIILN--DNLKEIKQGQMIGK 361


>gi|153814787|ref|ZP_01967455.1| hypothetical protein RUMTOR_01002 [Ruminococcus torques ATCC 27756]
 gi|317500310|ref|ZP_07958535.1| serine-type D-Ala-D-Ala carboxypeptidase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|145847818|gb|EDK24736.1| hypothetical protein RUMTOR_01002 [Ruminococcus torques ATCC 27756]
 gi|316898251|gb|EFV20297.1| serine-type D-Ala-D-Ala carboxypeptidase [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 415

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 11/321 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++ +TG V+ E   D    PAS+TK+MT  ++F  ++ KK  L   + +S+
Sbjct: 55  QIGAPSALLMEASTGTVLFEQDADTKRPPASVTKIMTMLLIFDAVESKKISLEDKVPVSE 114

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    + G T T+D  LK + + SAND  VA+AE +  +E+ FVQ MN  +K 
Sbjct: 115 FAASMGGSQVFLETGETQTVDTMLKCISIASANDACVAMAEYISGSEEAFVQEMNKRAKA 174

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           LG+  T+F+N +G+   GH TTARD+A++S  + T +PQ   Y       I  +      
Sbjct: 175 LGMHNTNFVNCNGLDAQGHVTTARDIALMSRELITKYPQIHEYAMTWMENITHETKKGTS 234

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  V  +  A G+KTG T  + F + A+  + D  LIAV++ A     R   +
Sbjct: 235 EFGLTNTNKLVRQYEYATGLKTGSTGEAKFCVSATGKKDDVELIAVVMAADTSKERFADA 294

Query: 257 ASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             +++ GF      +D K +             N      E+      +  +     K  
Sbjct: 295 VKMMNYGFGKCQVYSDEKPMKTKYAVVKNGVEENIEVERGEKFTYLDVKGKDMKKIKKIE 354

Query: 314 KDKESHFIDFEKITLLKNKIT 334
           K  +       K  ++ + + 
Sbjct: 355 KINKKILAPVRKGDVVGSIVY 375


>gi|182416858|ref|ZP_02948244.1| D-alanyl-D-alanine carboxypeptidase [Clostridium butyricum 5521]
 gi|237669065|ref|ZP_04529049.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182379320|gb|EDT76819.1| D-alanyl-D-alanine carboxypeptidase [Clostridium butyricum 5521]
 gi|237657413|gb|EEP54969.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 461

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 82/319 (25%), Positives = 141/319 (44%), Gaps = 10/319 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           + +   +     L++  TG +I E   D  + PAS+TK+MT  +    +   K  L   +
Sbjct: 96  AESNEIEARSALLMEPCTGKIIYEKNADEKFAPASVTKIMTMLLTIEAVDSGKIALDDKV 155

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           T S+NA +   S      G   T++  LK + + S ND AVA+AE L  TE  FV  MN 
Sbjct: 156 TCSENAKKMGGSTMLLDTGEIRTVEELLKGVAIASGNDAAVALAEYLGGTENDFVGMMNK 215

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIK 196
            ++ LG++ T F N +G+   GH +TA D+A +S  +            +   I      
Sbjct: 216 RAEELGMTNTTFKNCNGLPADGHLSTANDIAKMSKELLKHPTILKYTGTYMDTITEGRKS 275

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             +  N N  V  F G DG+KTGFT  + + I A+A +    +++VI+GA     RN+ +
Sbjct: 276 PIELVNHNKLVRFFDGCDGLKTGFTNEAKYCISATATRNGVRMLSVIMGAPTYKIRNRDA 335

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQ----QNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           + LL+ GF     +K  +   +        Q     +    +++     +      + K 
Sbjct: 336 SILLNYGFSKYEGKKIFSKDEEVDKVYMDEQTDRYFMAKAQDDLTAVLPKGCKDEVEKKV 395

Query: 313 AKDKESHFIDFEKITLLKN 331
             D      ++++  ++  
Sbjct: 396 VID--ELQKEYKEGDVVGK 412


>gi|310815390|ref|YP_003963354.1| Probable penicillin-binding protein [Ketogulonicigenium vulgare
           Y25]
 gi|308754125|gb|ADO42054.1| Probable penicillin-binding protein [Ketogulonicigenium vulgare
           Y25]
          Length = 314

 Score =  187 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 5/279 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +  ++  + + + +      A         ++D  TG V+     D   +PASLTK+MT 
Sbjct: 9   RLGLLAFIILCAAMMSHAFAAP----YAALVMDARTGQVLDSENADTRLHPASLTKMMTL 64

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y+ F  ++  +  L + +T+S NA+  PPS    + G  + L   ++   +KSAND A A
Sbjct: 65  YIAFQAIERGEVSLNSQVTVSANAAAQPPSRLGLRAGQRIELQYLIRAAAIKSANDAATA 124

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           I   +  +E+ F   MN T++ +G++ THF++ +G+  +GHY+TARDM IL   +  DFP
Sbjct: 125 IGVGISGSEEAFAARMNATARAMGMNNTHFISMNGLTTNGHYSTARDMTILGRHLIYDFP 184

Query: 183 QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           QY + F  +  +        TN   +  + GADG+KTG+T A+G+N+ ASA +G+  +IA
Sbjct: 185 QYYNLFSRRSADAGIATVRTTNSRLLDNYQGADGIKTGYTQAAGYNLTASAERGNVRIIA 244

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
            + GA     R+     L+  GF N     ++       
Sbjct: 245 TVFGATSNADRHTRITRLMDRGFANAPRNARLRPPEAPP 283


>gi|89069769|ref|ZP_01157105.1| D-alanyl-D-alanine carboxypeptidase family protein [Oceanicola
           granulosus HTCC2516]
 gi|89044715|gb|EAR50826.1| D-alanyl-D-alanine carboxypeptidase family protein [Oceanicola
           granulosus HTCC2516]
          Length = 448

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 88/282 (31%), Positives = 145/282 (51%), Gaps = 1/282 (0%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +     +A         ++D  TG V          +PASLTK+MT Y+ F  ++  +  
Sbjct: 3   LAALAPLASRAAPYAAMVMDARTGQVFHAENATTRLHPASLTKMMTLYIAFEAVERGEIS 62

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L T +TI + A+  PPS      G  +     ++   VKSAND A AIA ++  +++ F 
Sbjct: 63  LDTVVTIPRQAAAEPPSELGLVTGQQIRFRYLIRAAAVKSANDAATAIAFAISGSQEAFA 122

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN T++ +G+++T+F+NAHG+  +GH +TA DM IL   +  D+PQY + F  +  + 
Sbjct: 123 ARMNRTARAMGMNSTNFINAHGLTANGHMSTAADMTILGRHMIYDWPQYYNLFSRRTTDA 182

Query: 196 KGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
             ++  NTN      + GADG+KTG+T A+G N+VASA +G + +I  + GA     RN+
Sbjct: 183 GLREVSNTNRRFLDAYAGADGIKTGYTNAAGSNLVASAQRGSERIIVTVFGAPSSAVRNQ 242

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
               L+ +GF     +  +  + +  Y  N    +   S  +
Sbjct: 243 RVMELMDLGFSRAPSQVAVAALQRPPYLGNQGLPIGGGSRTI 284


>gi|134298966|ref|YP_001112462.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
 gi|134051666|gb|ABO49637.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
          Length = 403

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 75/322 (23%), Positives = 131/322 (40%), Gaps = 4/322 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             S           LLD ++G V+ +         AS+TKLMT  ++     +++  ++ 
Sbjct: 46  SSSAQLETTAETAVLLDYSSGQVLYDKDMHVARPMASVTKLMTMLLICEAESQERIKMSD 105

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +  S++A     S    + G  MT    L  +   SAND +VA+AE +  +++ FV  M
Sbjct: 106 KVVASEHACSMGGSQIFLEPGEEMTAKEMLISIATGSANDASVAMAEFIAGSQEAFVSMM 165

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGLEIKG 197
           N  +K +GL  THF N  G+    HYT+A DMA +          + +       L    
Sbjct: 166 NEKAKKMGLKNTHFSNPTGLPIENHYTSAYDMAQVLRECLRYPLFREVSSIYEYDLRGGD 225

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            K  NTN  +  + GAD  KTG+T  + + + ASA +    L++V+LG     T  + + 
Sbjct: 226 FKLWNTNKLLKWYAGADAGKTGWTNEASYCLAASAKRDSLRLVSVVLGCPMPRTHFQETI 285

Query: 258 SLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            + + GF                +   ++ +  +V  I+++            T      
Sbjct: 286 KIFNYGFARYKAVDMAEAGQVVKEIKVEKGMMEKVKVITKDPVGLVVPKGQEKTVKGTIN 345

Query: 315 DKESHFIDFEKITLLKNKITKK 336
             E      +K  ++   +  K
Sbjct: 346 LPEKVVAPIKKGQIIGQYVVSK 367


>gi|317496786|ref|ZP_07955116.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895798|gb|EFV17950.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 399

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 23/359 (6%)

Query: 1   MRQFLVIIAMAMLSN-------------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYP 47
           M+++ VI+ +A +                    +           +++  +  ++     
Sbjct: 1   MQKWKVILLVAAILVQSFYCPVMAREARFLETAAPVLDLSAKSAIVMEQESKEILFAKDK 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D    PAS+TK+M+  ++F  LK+ K  LT  +T+S++A+    S    + G    +   
Sbjct: 61  DKELAPASVTKIMSLLLIFEDLKQGKIKLTDTVTVSEHAASMGGSQVFLETGEKQQVQTL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           +K +++ SAND  VA+AE +C +E+ FV  MN  ++ LG+  T F NA G+   GH T+A
Sbjct: 121 IKCVVISSANDAVVALAEHVCGSEEAFVSRMNKKARELGMKHTTFQNACGLDTKGHVTSA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEI--------KGKKYPNTNWAVGTFLGADGMKTG 219
            D+A+++  +   +P+   Y +I    I        K     NTN  +  + G  GMKTG
Sbjct: 181 YDIALMTRELAQRYPEVFKYTKIWMDTIIHKTKKGEKEFGLSNTNKLIRQYHGCTGMKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR--KKINYII 277
            T  +GF + A+A +    +IAV++G      R K + +LL  GF N      +     I
Sbjct: 241 STGKAGFCLSATATRNKIHMIAVVMGCESSKARIKDARTLLDYGFSNCQRIHSETTRKEI 300

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                Q       +  E+V     +I     ++ +    +S     +K   +      K
Sbjct: 301 GRIPVQKGQRSEVSCQEKVTADLIDIKTQKGKIVKKIKIDSVKAPVKKGQKIGEIQYSK 359


>gi|126726756|ref|ZP_01742596.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodobacterales
           bacterium HTCC2150]
 gi|126704085|gb|EBA03178.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodobacterales
           bacterium HTCC2150]
          Length = 374

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/327 (23%), Positives = 137/327 (41%), Gaps = 6/327 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L+           ++D ++G V+     D P  PAS++KLMT  ++F  L + +  
Sbjct: 3   AAPLLAQNFATPARSAFVIDVSSGTVLLSKDADIPLPPASMSKLMTLNMLFEALVDGRVS 62

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L+    +S+ A +   S+    K    T +  ++ +IV+S ND  V +AE L   E++F 
Sbjct: 63  LSDTWRVSQRAQDMGGSSMYLDKRDRPTTEELIQGIIVQSGNDACVVVAEGLAGGEEEFA 122

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           Q M   +++LG++ + F NA G        +  D+  L+ R+ T+FPQ+  YF  K    
Sbjct: 123 QLMTERARSLGMNNSTFGNASGWPHPLQKMSTHDLGTLAVRLITEFPQFYPYFSQKSFAF 182

Query: 196 K---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                  + N N  +   +GADG+KTG T  +G+ +V SA+QG + ++ V+ G    + R
Sbjct: 183 DGRVPDNHRNRNPLLALGIGADGLKTGHTNEAGYGLVGSAVQGKRRVVFVVSGLDSASLR 242

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
              S  + +        +                 EV  ++       + ++      K 
Sbjct: 243 ASESERITNWALRQFIQKTIATPDDIITDAPVWMGEVTKVALVPAAPIELLLPVVGSDKL 302

Query: 313 AKDKE---SHFIDFEKITLLKNKITKK 336
               E              L   + K+
Sbjct: 303 NALVEYHGPIQAPVSAGQELGKLVIKR 329


>gi|295690183|ref|YP_003593876.1| serine-type D-Ala-D-Ala carboxypeptidase [Caulobacter segnis ATCC
           21756]
 gi|295432086|gb|ADG11258.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caulobacter segnis ATCC
           21756]
          Length = 433

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 101/316 (31%), Positives = 150/316 (47%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
               +A    S   P+L +  +       ++D N+G V+ +   D P  PAS+TK+MT Y
Sbjct: 22  LFGALAPTPASAAIPYLQLNASEPKYAAIVIDANSGEVLYDKRADSPRYPASVTKVMTLY 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  L E +  LT  + +S  A+   P+    + G +M++D A+K + VKSAND+AVA+
Sbjct: 82  LTFEALSEGRMKLTDRVVMSPRAAAQAPTKIGLRPGDSMSVDEAIKAMTVKSANDVAVAM 141

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE L  +E +F   M    + LG+  + F+NA G+      +TARD+AILS  I  DFPQ
Sbjct: 142 AERLAGSESRFAALMTLRGQELGMRNSRFVNASGLPDSRQISTARDLAILSRAIMRDFPQ 201

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           Y  YF I+G   +G      N  + +  G DG+KTG+T ASGFN+  SA++  + LIAV+
Sbjct: 202 YYSYFSIRGFTFRGNYVKGHNRLLDSMEGFDGLKTGYTNASGFNLAGSAVRDGRRLIAVV 261

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           LG      R+     LL  GF     R +                 P     V     + 
Sbjct: 262 LGGPSTAWRDNNMEDLLLTGFDVMKRRSRGERTTIAANIYEDDPSGPIQRPSVEQGDGDQ 321

Query: 304 INYNTQMKEAKDKESH 319
                 + E       
Sbjct: 322 AGLKIVLTENPHNPGP 337


>gi|332529901|ref|ZP_08405852.1| serine-type D-Ala-D-Ala carboxypeptidase [Hylemonella gracilis ATCC
           19624]
 gi|332040598|gb|EGI76973.1| serine-type D-Ala-D-Ala carboxypeptidase [Hylemonella gracilis ATCC
           19624]
          Length = 378

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 99/339 (29%), Positives = 159/339 (46%), Gaps = 20/339 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + LLD ++G  +A +  D    PASLTKLMTAY+VF  L++ +  L 
Sbjct: 9   SLAPKPPELAARAWLLLDLSSGQALAASNADQTLPPASLTKLMTAYLVFEALRDGRLSLE 68

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            P+TIS+ A   P S    + G  + +++ +K L+V+S ND AVA+AE +  + + FVQ 
Sbjct: 69  KPLTISERARRQPGSRMFLEAGMRVPVEDLIKGLLVQSGNDGAVALAEGVAGSMENFVQA 128

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN  ++ LGL ATHF N  G+   G  +TARD+ +L+ R+ +DFP++ HY+ I+      
Sbjct: 129 MNEKARALGLGATHFANPTGLPVDGQQSTARDLGVLAQRLLSDFPEHAHYYGIRKYRYAG 188

Query: 196 -KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-----------GDQSLIAVI 243
                  N N  +      DGMKTG   A G+++VA+A +           G + L+AV+
Sbjct: 189 TPPANDSNRNLLLFRDPSVDGMKTGHVEAVGYSMVATAQREFPHLGAAGGPGPRRLLAVV 248

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVPNISEE---VC 297
           LGA    TR   +  LL+ G+      K       ++     +  + EV     +   V 
Sbjct: 249 LGADSEQTRAAEAQRLLNWGYTAFEAVKLFEANQAVLTASIWKGRAAEVRLGRPQAIVVT 308

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                       +  A    +     +   LL+ +  ++
Sbjct: 309 VPAGWGAQLRMDVVRADPLIAPLRQGQAAGLLRIREGER 347


>gi|138893689|ref|YP_001124142.1| D-alanine carboxypeptidase [Geobacillus thermodenitrificans NG80-2]
 gi|196251175|ref|ZP_03149851.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. G11MC16]
 gi|134265202|gb|ABO65397.1| D-alanine carboxypeptidase [Geobacillus thermodenitrificans NG80-2]
 gi|196209316|gb|EDY04099.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. G11MC16]
          Length = 452

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 142/375 (37%), Gaps = 41/375 (10%)

Query: 3   QFLVIIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
            F+ ++++ +   ++PF +           +     L+D  TG ++ E   D     AS+
Sbjct: 8   WFVWLLSICLCLTLWPFQATVKAESAPLDIRADAAILVDAQTGRILYEKNIDAVLGIASM 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT Y++   +K K+       T S          S             ++ L    A
Sbjct: 68  TKMMTEYLLLDAIKAKRVKWDQTYTPSDYVYRLSQDRSLSNVPLRKDGQYTVRELYEAMA 127

Query: 117 NDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------- 159
              A A   ++ +    +EK FV+ MN   K LGL    F+N+ G+              
Sbjct: 128 IYSANAATVAIAEIIAGSEKNFVRMMNEKGKELGLKDYKFVNSTGLSNSDLKGFHPQGTS 187

Query: 160 -QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL-----EIKGKKYPNTNWA----VGT 209
               +  +AR MA L++R+  D P+ +    I             +  N NW     V  
Sbjct: 188 QDEENVMSARAMATLAYRLLKDHPEVLETASIPKKLFREGTDDEIRMDNWNWMLPGLVYG 247

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVSASLLSMG 263
           + G DG+KTG+T  +G     +A +    LI+V++ A        +  R + +  L + G
Sbjct: 248 YEGVDGLKTGYTEFAGNCFTGTAKRNGVRLISVVMNAKNASGKTTKEARFEETKKLFNYG 307

Query: 264 FYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
           F   + +       +   ++ L        E    T K++       +E + K  + +D 
Sbjct: 308 FNQYSLQTLYPKGYQLKGKEKLPVAKGKEKEVRVKTGKKLSLLVRNGEEKQYKPVYVLDK 367

Query: 324 EKITLLKNKI--TKK 336
           +K+T         KK
Sbjct: 368 KKMTNEGKLTAPLKK 382


>gi|326204096|ref|ZP_08193957.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium papyrosolvens
           DSM 2782]
 gi|325985863|gb|EGD46698.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium papyrosolvens
           DSM 2782]
          Length = 401

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 12/319 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D  +G V+ E       + AS TK+MTA V     K+        + +S
Sbjct: 53  PRVSAGAAIVMDAKSGRVLYEKNGYKRNSIASTTKIMTAIVAIENGKD-----DEDVIVS 107

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K A+    S    K+G    L N L  ++++S ND A+AIAE +  + + F + MN  + 
Sbjct: 108 KRAASIGGSRVNLKEGKIYKLGNLLNAMMLRSGNDAAIAIAEHIGGSVEAFAEMMNRKAA 167

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +G + T+F+  HG+    HY+T  D+A+++     +  ++      K    +G    NT
Sbjct: 168 QIGATNTNFVTPHGLDDPQHYSTPFDLAMITQYALKN-EKFCKIVSTKSSSFEGNPINNT 226

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +  + GADG+KTG+T  +G  +V SA      +I+V+L    R+ R + S  LL   
Sbjct: 227 NEMLSLYPGADGVKTGYTGQAGRCLVTSATHNGWKVISVVLNCSTRSVRAQNSKILLDYA 286

Query: 264 FYNKTDRKKINYIIKDFYQQNLSNEVPNIS----EEVCTTQKE--IINYNTQMKEAKDKE 317
           F N +    +    +            ++     ++V    K+        +    K  E
Sbjct: 287 FGNYSTYDYLKQGQQISEIGIHKGLNNSVGLCSDKDVSIPLKKDEADRIKAEYDIPKTLE 346

Query: 318 SHFIDFEKITLLKNKITKK 336
           +      +I  +K  +  K
Sbjct: 347 APIQKGSRIGTVKYVLDGK 365


>gi|289209131|ref|YP_003461197.1| beta-lactamase [Thioalkalivibrio sp. K90mix]
 gi|288944762|gb|ADC72461.1| Beta-lactamase [Thioalkalivibrio sp. K90mix]
          Length = 415

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 170/375 (45%), Gaps = 40/375 (10%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE-------------------TNKLPYYTLLDTNTGHVI 42
           R+ L+ +++A+     P ++                            Y L+D ++G ++
Sbjct: 10  RRALMTLSLAVCVAAMPAMADEPLPVPGSGGAMPSGIPSPPSDVTAKSYALMDFDSGLML 69

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKG 99
           A    D    PASLTKLMTAYVVF  +++ +  L   +TIS+ A             + G
Sbjct: 70  ASREADVDREPASLTKLMTAYVVFGEIRDGRLGLEDTVTISERAWRTGMRGASRMFIEVG 129

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
             + +++ L+ +I++S ND + A+AE++  +E  FV  MNN ++ LG++ ++F N+HG+ 
Sbjct: 130 DEVKVEDLLRGMIIQSGNDASTALAEAVAGSEGAFVDMMNNQARELGMTRSYFTNSHGLP 189

Query: 160 -QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
                 T+A+DMA+L+  +  +FP    Y+  +  E       N N  +    G DG+KT
Sbjct: 190 SDEPQSTSAQDMALLARALIREFPDLYGYYSERSFEFNDISQSNRNMLLWRDAGFDGLKT 249

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKK 272
           G+T A+G+N+V+SA + D+ LIAV+LG    N       R   S +L++ G      ++ 
Sbjct: 250 GWTSAAGYNLVSSAKRSDRRLIAVVLGIEASNHQEGGTRRANESQALVNWGMRFTEPQRL 309

Query: 273 INYII----KDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                       Y+   S     ++E+  V        N    M+  +  E+       +
Sbjct: 310 FEAGTQLGSPRVYRGADSEVSVGLAEDFWVIVPPGRGDNLEATMELNQPLEAPLAAGAAV 369

Query: 327 TLL-----KNKITKK 336
             +        I ++
Sbjct: 370 GEVQARLNGELIGQQ 384


>gi|209542214|ref|YP_002274443.1| Serine-type D-Ala-D-Ala carboxypeptidase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529891|gb|ACI49828.1| Serine-type D-Ala-D-Ala carboxypeptidase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 413

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 138/315 (43%), Gaps = 4/315 (1%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                  +  +LD  TG V+ E   D    P+SLTK+MTAY+VF  LK  +  L   + +
Sbjct: 62  PLDTVARWACILDVTTGSVLLEKAADERMPPSSLTKMMTAYIVFGMLKSGRLKLDQMLPV 121

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S+ A     S      G ++ + + ++ ++++S ND  + +AE +  +E++FV  MN+ +
Sbjct: 122 SEKAWRMQGSKMFVPLGQSIAVQDLIQGMVIQSGNDACIVLAEGVAGSEEQFVAQMNDMA 181

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +GLS +HFMNA G     HY +ARD+A L+ R+  DFP+Y H+F  K          N
Sbjct: 182 ARIGLSNSHFMNATGWPADNHYMSARDVAQLAVRLIRDFPEYYHFFSEKDYRFNKISQGN 241

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  V   L ADG+KTG T A GF + ASA +G   ++  + G    N R      LL  
Sbjct: 242 RNVLVDKGL-ADGLKTGHTDAGGFGLCASADRGGNRVVLSLNGMPSSNARAHEGERLLEW 300

Query: 263 GFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            F N  +           +          VP ++             +        +   
Sbjct: 301 SFANFENATLFRKGDIVEQASVWLGTQPTVPLVATRDIVMTLPHGWRSRAHIGVDYQAPV 360

Query: 320 FIDFEKITLLKNKIT 334
                   +L + + 
Sbjct: 361 AAPVAAGQVLGDLVI 375


>gi|162147581|ref|YP_001602042.1| penicillin-binding protein 5 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786158|emb|CAP55740.1| putative penicillin-binding protein 5 precursor [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 422

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 138/315 (43%), Gaps = 4/315 (1%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                  +  +LD  TG V+ E   D    P+SLTK+MTAY+VF  LK  +  L   + +
Sbjct: 71  PLDTVARWACILDVTTGSVLLEKAADERMPPSSLTKMMTAYIVFGMLKSGRLKLDQMLPV 130

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S+ A     S      G ++ + + ++ ++++S ND  + +AE +  +E++FV  MN+ +
Sbjct: 131 SEKAWRMQGSKMFVPLGQSIAVQDLIQGMVIQSGNDACIVLAEGVAGSEEQFVAQMNDMA 190

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             +GLS +HFMNA G     HY +ARD+A L+ R+  DFP+Y H+F  K          N
Sbjct: 191 ARIGLSNSHFMNATGWPADNHYMSARDVAQLAVRLIRDFPEYYHFFSEKDYRFNKISQGN 250

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  V   L ADG+KTG T A GF + ASA +G   ++  + G    N R      LL  
Sbjct: 251 RNVLVDKGL-ADGLKTGHTDAGGFGLCASADRGGNRVVLSLNGMPSSNARAHEGERLLEW 309

Query: 263 GFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            F N  +           +          VP ++             +        +   
Sbjct: 310 SFANFENATLFRKGDIVEQASVWLGTQPTVPLVATRDIVMTLPHGWRSRAHIGVDYQAPV 369

Query: 320 FIDFEKITLLKNKIT 334
                   +L + + 
Sbjct: 370 AAPVAAGQVLGDLVI 384


>gi|238789672|ref|ZP_04633455.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia frederiksenii
           ATCC 33641]
 gi|238722225|gb|EEQ13882.1| D-alanyl-D-alanine carboxypeptidase dacA [Yersinia frederiksenii
           ATCC 33641]
          Length = 401

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 11/313 (3%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           Y L+D ++G V+AE   D   +PASLTK+M++YV+   +K  K      +T+ K+A    
Sbjct: 43  YVLMDYDSGKVLAEGNSDQRLDPASLTKIMSSYVIGQAIKAGKVHPDDLVTVGKDAWATG 102

Query: 91  PSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                       K G  + L +  K ++++S ND ++A+A+ +  ++  FV  MNN +K 
Sbjct: 103 NPALRGSSLMFLKPGDQVKLSDLNKGIVIQSGNDASIALADYIAGSQDSFVGLMNNYAKA 162

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LGL+ T+FM  HG+   G Y+TA DMA+L   +  D P+     + K       +  N N
Sbjct: 163 LGLNNTNFMTVHGLDAPGQYSTAHDMAVLGQALIRDVPEEYALHKEKEFTFNKIRQINRN 222

Query: 205 W-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
                T L  DGMKTG+T  +G N+VASA  G   LI+V+LGA     R   S  LL+ G
Sbjct: 223 RLLWNTNLNVDGMKTGYTTGAGHNLVASATDGPMRLISVVLGAPSDRVRFSESEKLLTWG 282

Query: 264 FYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           F        I           +  +       ++++   T  +    N +     D+   
Sbjct: 283 FRFYETVVPIKATKPFVTQKVWFGDTGQAELGVAQDAAITIPKGQMKNLKASYKLDQTEL 342

Query: 320 FIDFEKITLLKNK 332
                K  ++   
Sbjct: 343 RAPLAKHQVVGTI 355


>gi|167766358|ref|ZP_02438411.1| hypothetical protein CLOSS21_00862 [Clostridium sp. SS2/1]
 gi|167711949|gb|EDS22528.1| hypothetical protein CLOSS21_00862 [Clostridium sp. SS2/1]
          Length = 399

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 20/355 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLS--------IAE--TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +  L++ A+ + S   P ++         A           +++  +  ++     D   
Sbjct: 5   KAILLVAAILVQSFYCPVMAREARFLETAAPVLDLSAKSAVVMEQESKEILFAKDKDKEL 64

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+M+  ++F  LK+ K  LT  +T+S++A+    S    + G    +   +K +
Sbjct: 65  APASVTKIMSLLLIFEDLKQGKIKLTDTVTVSEHAASMGGSQVFLETGEKQQVQTLIKCV 124

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAND  VA+AE +C +E+ FV  MN  ++ LG+  T F NA G+   GH T+A D+A
Sbjct: 125 VISSANDAVVALAEHVCGSEEAFVSRMNKKARELGMKHTTFQNACGLDAKGHVTSAYDIA 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEI--------KGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           +++  +   +P+   Y +I    I        K     NTN  +  + G  GMKTG T  
Sbjct: 185 LMTRELAQRYPEVFKYTKIWMDTIIHKTKKGEKEFGLSNTNKLIRQYHGCTGMKTGSTGK 244

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR--KKINYIIKDFY 281
           +GF + A+A +    +IAV++G      R K + +LL  GF N      +     I    
Sbjct: 245 AGFCLSATATRNKIHMIAVVMGCESSKARIKDARTLLDYGFSNCQRIHSETTRKEIGRIP 304

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            Q       +  E+V     +I     ++ +    +S     +K   +      K
Sbjct: 305 VQKGQRSEVSCQEKVTADLIDIKTQKGKIVKKIKIDSVKAPVKKGQKIGEIQYSK 359


>gi|229003020|ref|ZP_04160878.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides Rock1-4]
 gi|228758220|gb|EEM07407.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides Rock1-4]
          Length = 444

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 138/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L         +       A   +     L++ ++G ++ +   D     
Sbjct: 12  KRFIAMVTVLTLFCSMFVTYGSASAETGAALNVEAGAAILVEADSGKILYQKNADELLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A       S          + T+    +
Sbjct: 72  ASMTKMMSEYLVNEAVAKGKLKWDQKVKVSEYAHMISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALAEAIAGKEADFVKMMNDKAKELGLKNYKFVNSTGLTNHDLKGQQPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+  +  DFP+ +   +I     +       K  N NW     
Sbjct: 192 GTTPDEENKMSARDCAILAQHLIQDFPKVLETAKIPKKVFQEGGKYPVKMDNWNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           V  + G DG+KTG T  +G     +A +    LI+V++       R   +  L   GF N
Sbjct: 252 VKEYEGVDGLKTGSTPEAGDCFTGTAERNGMRLISVVIKTNSHTARFDETKKLFDYGFTN 311

Query: 267 KTDRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      +      + +     +      + +     +  
Sbjct: 312 FEVKKVYPKGSAVKGHETVRVENAKDKDVTIQTKQAIALPMLKGSKDAYKTEFKDVSKDK 371

Query: 320 FIDFEKITLLKNKIT 334
               +K T L   I 
Sbjct: 372 EAPIKKGTTLGQMII 386


>gi|254455195|ref|ZP_05068630.1| D-alanyl-D-alanine carboxypeptidase [Octadecabacter antarcticus
           238]
 gi|198263605|gb|EDY87877.1| D-alanyl-D-alanine carboxypeptidase [Octadecabacter antarcticus
           238]
          Length = 399

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 16/340 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
             +    +++  P  +     +     +LD +TG V+     D P  PAS+ KLMT Y+ 
Sbjct: 9   FALFALFIASAAPVGAQTFDTRASAAYVLDHSTGVVLLAKNADDPLPPASMLKLMTLYMA 68

Query: 66  FSFL-----KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           F  +     ++    +   + +S++  +Y  S         + +D+ L+ +IV S ND +
Sbjct: 69  FEAINPLNGQDPFLTVDDVLPVSQHCMDYTGSTMFLDTTDRVRVDDLLRGIIVLSGNDAS 128

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             IAE L +   E  F Q M   ++ LG+  + F N++G    G   + RD+ +L+ R+ 
Sbjct: 129 CVIAEGLSRNGTEAGFAQQMTVRAQQLGMLNSSFANSNGWPAAGQRMSMRDLGLLANRLI 188

Query: 179 TDFPQYMHYFQIKGLEI---KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           TD+P +   F  +  +          N N  +   +GADG+KTG T  +G+ +V SA QG
Sbjct: 189 TDYPTFYPLFAEQEFDYDGEHPANTRNRNPLLSLGIGADGLKTGHTIEAGYGLVGSAKQG 248

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI--- 292
           D+ +I V+ G      R + +  +++  F   T R       +    +    E P +   
Sbjct: 249 DRRIIFVVTGHETVQERAEEAERIVNWAFRQFTQRDIARSGTRIAQAEVWRGEQPLVGLL 308

Query: 293 ---SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                 +          + ++      E+     + I  L
Sbjct: 309 LQEDLSLLVPTSGGSEISAEVVYNGPIEAPIAQGDTIAEL 348


>gi|228989223|ref|ZP_04149217.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus pseudomycoides DSM 12442]
 gi|228770498|gb|EEM19068.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus pseudomycoides DSM 12442]
          Length = 444

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 138/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L         +       A   +     L++ ++G ++ +   D     
Sbjct: 12  KRFIAMVTVLTLFCSMFVTYGSASAETGAALNVEAGAAILVEADSGKILYQKNADELLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A       S          + T+    +
Sbjct: 72  ASMTKMMSEYLVNEAVAKGKLKWDQKVKVSEYAHMISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALAEAIAGKEADFVKMMNDKAKELGLKNYKFVNSTGLTNHDLKGQQPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+  +  DFP+ +   +I     +       K  N NW     
Sbjct: 192 GTTPDEENKMSARDCAILAQHLIQDFPKVLETAKIPKKVFQEGGKYPVKMDNWNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           V  + G DG+KTG T  +G     +A +    LI+V++       R   +  L   GF N
Sbjct: 252 VKEYEGVDGLKTGSTPEAGDCFTGTAERNGMRLISVVIKTNSHTARFDETKKLFDYGFTN 311

Query: 267 KTDRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      +      + +     +      + +     +  
Sbjct: 312 FEVKKVYPKGSAVKGHETVRVENAKDKDVTIQTKQAIALPMLKGSKDVYKTEFKDVSKDK 371

Query: 320 FIDFEKITLLKNKIT 334
               +K T L   I 
Sbjct: 372 EAPIKKGTTLGQMII 386


>gi|319778852|ref|YP_004129765.1| D-alanyl-D-alanine carboxypeptidase [Taylorella equigenitalis MCE9]
 gi|317108876|gb|ADU91622.1| D-alanyl-D-alanine carboxypeptidase [Taylorella equigenitalis MCE9]
          Length = 430

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 82/309 (26%), Positives = 143/309 (46%), Gaps = 5/309 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
               +  + ++D  +G +IA+  PD    PASLTKLMT+ +VF  +K+K+  L   + +S
Sbjct: 82  PQLDVKSWIIIDMESGQIIAQYNPDLKVAPASLTKLMTSSLVFEAIKDKRISLDQEVIVS 141

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A +   S         +T+   L+ +IV+S ND ++ +AES+  T   FV+ MN++ +
Sbjct: 142 ERAWKTGGSRMFINVNKKVTIGELLQGMIVQSGNDASIQLAESVSGTIDAFVKEMNDSLQ 201

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
              +  +HF +  G+     YTTARD+++L+  I  DFPQ+ HYF          +  NT
Sbjct: 202 AFHMLNSHFADPTGLPSPNTYTTARDLSVLAQHIIVDFPQFYHYFSQPEFTYNKIRQTNT 261

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +G   G DG+KTG T  +G+ +V S  + ++ ++ +++GA     R ++S  L+   
Sbjct: 262 NGLLGKIEGLDGLKTGHTDEAGYCLVTSVKRNNRRILTILMGADSIKHREQLSKQLIDWT 321

Query: 264 FYNKTDRKKINYIIKDFY----QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           F N  + +                     V   ++ V  T       N Q+         
Sbjct: 322 FQNFVNIEWAKANTPFVEHSIRDAKNKKAVFQSTKPVVITVPRGHEANIQVLSN-TSNDL 380

Query: 320 FIDFEKITL 328
               +    
Sbjct: 381 KAPLKAGQA 389


>gi|228995406|ref|ZP_04155077.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides Rock3-17]
 gi|228764332|gb|EEM13208.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides Rock3-17]
          Length = 444

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 138/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L         +       A   +     L++ ++G ++ +   D     
Sbjct: 12  KRFIAMVTVLTLLCSMFVTYGSASAETGAALNVEAGAAILVEADSGKILYQKNADELLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A       S          + T+    +
Sbjct: 72  ASMTKMMSEYLVNEAVAKGKLKWDQKVKVSEYAHMISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALAEAIAGKEADFVKMMNDKAKELGLKNYKFVNSTGLTNHDLKGQQPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+  +  DFP+ +   +I     +       K  N NW     
Sbjct: 192 GTTPDEENKMSARDCAILAQHLIQDFPKVLETAKIPKKVFQEGGKYPVKMDNWNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           V  + G DG+KTG T  +G     +A +    LI+V++       R   +  L   GF N
Sbjct: 252 VKEYEGVDGLKTGSTPEAGDCFTGTAERNGMRLISVVIKTNSHTARFDETKKLFDYGFTN 311

Query: 267 KTDRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      +      + +     +      + +     +  
Sbjct: 312 FEVKKVYPKGSAVKGHETVRVENAKDKDVTIQTKQAIALPMLKGSKDAYKTEFKDVSKDK 371

Query: 320 FIDFEKITLLKNKIT 334
               +K T L   I 
Sbjct: 372 EAPIKKGTTLGQMII 386


>gi|312115142|ref|YP_004012738.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311220271|gb|ADP71639.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 410

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 74/326 (22%), Positives = 133/326 (40%), Gaps = 9/326 (2%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +          TL+D  +G  + E   D  + PAS++K+MT  V+F  LK  +  
Sbjct: 17  ALAQSTGGYQTAAAEATLIDVESGATLFEKNADRLFAPASMSKIMTLAVIFKKLKAGEIT 76

Query: 76  LTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           + T   +S  A          ++       T  + + ++ + V++AND  +A+AE +  T
Sbjct: 77  MDTEFPVSLYAWRNGGAPSRTTSMFIPLNQTAKVSDLIQGIAVQNANDACIAVAEGISGT 136

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E  F + M   ++ LGL  + F N+ G+   G+  TAR++A LS  +   +P    YF  
Sbjct: 137 EDAFAKLMTEEARALGLQKSTFGNSTGLPHPGNQMTARELAALSIHVIKTYPDLYPYFGQ 196

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K  + +   + N N    T + ADG+K GFT   G++I ASA++  + L+ V+ G     
Sbjct: 197 KEFKYRTYTFRNHNPLQATAIAADGLKPGFTEGVGYSIAASAVRDGRRLVLVMNGLESER 256

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R + +  +L+ GF N    K  +          +            E+V          
Sbjct: 257 DRREEAQKILNWGFVNFKAYKVFDKDEVVGDVRVWGGQKWTLPVKAKEDVVVLLPVNAKD 316

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNK 332
                +   +       ++   +   
Sbjct: 317 QRIRAQIAYQGPLKPPLKEGDPVGEV 342


>gi|118477901|ref|YP_895052.1| D-alanyl-D-alanine carboxypeptidase A [Bacillus thuringiensis str.
           Al Hakam]
 gi|118417126|gb|ABK85545.1| D-Ala-D-Ala carboxypeptidase A, Serine peptidase, MEROPS family S11
           [Bacillus thuringiensis str. Al Hakam]
          Length = 450

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 139/375 (37%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ II +  L         +       A   +     L++ N+G ++ E   D     
Sbjct: 33  KRFIAIITVLTLFCSITVISGSASAETVSAIEVEAGSAVLVEANSGKILYEKNADELLAI 92

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   ++  K      + IS+ A +     S          + T+    +
Sbjct: 93  ASMTKMMSEYLVHEAVENGKLKWNQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 152

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 153 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 212

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 213 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQQGGKYPIDMTNFNWMLKGL 272

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +A +    LI+V++ A     R   +  L   GF N
Sbjct: 273 IKQYEGVDGLKTGTTPEAGDCFTGTAERNGMRLISVVIKANSHAARFDETKKLYDYGFAN 332

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              RK                      + V    + V     +      + +     +  
Sbjct: 333 FEVRKVNEKDSVVNGHETVRIANAKDKDVVVQTKQAVSLPILKSNKDVYKKEFKVLNKEQ 392

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 393 EAPIKKGVTISKMII 407


>gi|153009406|ref|YP_001370621.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
 gi|151561294|gb|ABS14792.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
          Length = 398

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 92/334 (27%), Positives = 152/334 (45%), Gaps = 11/334 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           ++++   +  A   K P   L+D  +G V+     + P  PASL KLMTA VVF  L++ 
Sbjct: 26  VASLAAPVEAAFVTKAPQVLLVDDRSGTVLLSKNANVPIPPASLVKLMTAEVVFEALEQG 85

Query: 73  KAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
              L TP T+S+NA          S    +  ST T+ + L+ +IV+SAND A+ +AE L
Sbjct: 86  ATTLGTPYTVSENAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSANDGAIVLAEGL 145

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E+ F   MN+ +K LGL  + F+N+ G+   G   + +D+  L+  I+T  P+Y  Y
Sbjct: 146 AGSEQAFADRMNDRAKELGLIGSKFVNSTGLPAEGQVVSLQDLVRLARHIRTAHPEYYKY 205

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           +             N N  +   +GADGM TGFT ASGF +V SA Q  + L   + G  
Sbjct: 206 YAQPAFTWNNIMQRNRNPLLRLDVGADGMGTGFTEASGFALVGSAEQNGRRLYLAMSGLA 265

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI------SEEVCTTQK 301
               R + +  LL  G     D +           Q     + ++        E+   + 
Sbjct: 266 SIKEREEEAKRLLQWGMTAFDDVQLYPADEIVGEAQVFGGALTHVPLKVKDRVELLLPKD 325

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                  ++      ++   D +++ +L+ ++  
Sbjct: 326 GRNKLKARIVYKGPLDAPVADNQQVGVLRLELNG 359


>gi|126642471|ref|YP_001085455.1| D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5
           (precursor) [Acinetobacter baumannii ATCC 17978]
          Length = 346

 Score =  185 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 12/309 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY---P 90
           +D  TG ++A    +    PAS+TK+MT+Y++   L + +      + ++++A       
Sbjct: 1   MDYETGQILASKNENEKLAPASMTKMMTSYIIEQKLLKGELTENEQVRMNESAWCKGSSS 60

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S        T T+   L+ +I++S ND + A+AE +   E  F   MN  +K +G++ T
Sbjct: 61  ESCMYVPLNGTATVLEMLRGIIIQSGNDASKAMAEHIAGNEGTFAHMMNQEAKRIGMTNT 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
            F+N+ G+   GHY+TA+DMA+L+  I  D  +Y   +  K     G K  N N  + T 
Sbjct: 121 QFINSTGMPAEGHYSTAKDMAVLAQHIIKDSSKYYPIYSEKEFTFNGIKQGNRNALLYTD 180

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
              DG+KTG T  +G+ +  S+ +G   LI+VI G    + R   + +LL+ GF N    
Sbjct: 181 PSVDGLKTGHTDEAGYCLTTSSKRGPMRLISVIFGTPSMSERADQTRALLAWGFANFETA 240

Query: 271 ------KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
                 + +      F ++N        +  V   + +     TQ+     + +     +
Sbjct: 241 NVQPANQVLAKAKVWFGKENEVQVGLAENFNVTMPKGKADGIKTQLVV---QPNLNAPLQ 297

Query: 325 KITLLKNKI 333
           K  ++   +
Sbjct: 298 KGQVVGKLV 306


>gi|329120772|ref|ZP_08249433.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327460142|gb|EGF06480.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 432

 Score =  185 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 5/306 (1%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           Y + D  +G ++     D P  PASLTKLMTAY+ F  L+  K   T  +T S+ A    
Sbjct: 84  YLVQDLQSGQILTGRDLDKPVEPASLTKLMTAYLAFKALESGKLNATDTLTPSEKAWRAE 143

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S      G  + + + LK LIV+S ND A+ +AE+L  +E+ F + MN  +K LG++ T
Sbjct: 144 GSRMFLNAGKPVAVGDLLKGLIVQSGNDAAITLAEALGGSEEGFAKMMNAEAKRLGMNGT 203

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
           HF NA G+   GH+TT RD+AIL+  I  D+P+Y   + ++  +    + PN N  +   
Sbjct: 204 HFTNATGLPGDGHFTTVRDLAILAAAIIRDYPKYYPIYSMQSFKYNNIEQPNRNLLLYRD 263

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
              DG+KTG T ++G+N+VAS+ +  + +++V++G      R   S+ LL+         
Sbjct: 264 PNVDGLKTGHTNSAGYNLVASSKRNGRRVVSVVVGTESIEARAGESSKLLNWALQAFDTP 323

Query: 271 KKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
           K  +          Y+          +E V  T         +    +  +      EK 
Sbjct: 324 KAYDAGKAVSAAQVYKGKADTVNVGFAEPVYVTIPHGEGSKVKTVL-ETVQPVVAPVEKG 382

Query: 327 TLLKNK 332
            +L   
Sbjct: 383 QVLGKL 388


>gi|92117541|ref|YP_577270.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrobacter hamburgensis
           X14]
 gi|91800435|gb|ABE62810.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrobacter hamburgensis
           X14]
          Length = 414

 Score =  185 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 81/335 (24%), Positives = 145/335 (43%), Gaps = 14/335 (4%)

Query: 10  MAMLSNIFPFLSIAETNK---LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +A+ +N     +  E       P   L++ N+G V+ E   D    P+S+ KLMT  VVF
Sbjct: 33  IALAANNSVQGAKKEEIYETVAPTAILVEANSGSVLFEKNADELHAPSSMMKLMTVEVVF 92

Query: 67  SFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +++ +  LT    IS+N           S       S +++D+ L   I++S ND  +
Sbjct: 93  DAIRKGQIKLTDEFVISENTWRKGGAPSGGSTMFAAINSRVSVDDLLHGAIIQSGNDSCM 152

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +   E  F + M   +++LG++ + F N++G+   G+  T R++A+L+  I   +
Sbjct: 153 ALAEGIAGNESAFAEKMTARARDLGMTRSTFANSNGLPDPGNKMTVRELAVLARHIVLTY 212

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P +   F  +       +  N N  +    GADG+KTG+T   G+ +V SA+Q    LI 
Sbjct: 213 PDFYKLFGEREFTWNKIRQFNRNPLLTAMEGADGLKTGYTKEGGYGMVGSAVQNGTRLIV 272

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EE 295
           V+ G    + R   +  LL  GF N   R          Y +    +  ++        +
Sbjct: 273 VVNGLASADDRAAAAKKLLEWGFRNFEVRTLFAAEQTIGYAKVFGGDSGSVRVAASEPVQ 332

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           V   +        ++       +     + I ++K
Sbjct: 333 VMVQKNGSDRLIARIVYTGPVHAPIAPEQPIGVIK 367


>gi|229026963|ref|ZP_04183283.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1272]
 gi|228734350|gb|EEL85024.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1272]
          Length = 453

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 138/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ E   D     
Sbjct: 23  KRFIAIVTVLTLFCSMIVTFGRASAETVPAIDVEAGSAILVEANSGKILYEKNADESLAI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 83  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 142

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 143 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 202

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 203 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQNGGKYPIDMTNFNWMLKGL 262

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 263 IKEYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKANSHTARFDETKKLYDYGFAN 322

Query: 267 KTDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K           +          + V    + +     +      + +     E  
Sbjct: 323 FEVKKVYGKESVVKGYETVRVANAKDKDVVVQTKQAILLPIPKSNKDVYKKEFKVSNEEQ 382

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 383 EAPIKKGVTISKMII 397


>gi|225572270|ref|ZP_03781134.1| hypothetical protein RUMHYD_00564 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040275|gb|EEG50521.1| hypothetical protein RUMHYD_00564 [Blautia hydrogenotrophica DSM
           10507]
          Length = 414

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/320 (24%), Positives = 153/320 (47%), Gaps = 11/320 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            + PY  L++ +TG ++ E   D   +PAS+TK+MT  ++F  ++     +   +T S  
Sbjct: 53  IQSPYGVLMEASTGEILYEKEKDTKRSPASITKIMTLILIFDAIENGSLNMDDMVTTSAY 112

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S    ++G T  ++  +K +++ S ND +VA+AE +  +E++FV+ MN+ +++L
Sbjct: 113 AKSMGGSQVYLEEGETQDVETMIKCIVIASGNDASVAMAEHIAGSEEEFVKKMNDRAQSL 172

Query: 146 GLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           G+  THF +  G+     HYTTA D+A++S  + T +P+ + Y  I    I  K      
Sbjct: 173 GMKNTHFEDCCGLTDSENHYTTAYDVALMSRELITHYPKILEYSSIWMDTITHKTRQGTS 232

Query: 200 ---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                NTN  + ++ G  G+KTG T  + + + A A +   SLI+V++ A D   R   +
Sbjct: 233 EFGLTNTNKLIRSYEGCVGLKTGSTSLAKYCVSAVAQKNGMSLISVVMAAPDYKVRFSDA 292

Query: 257 ASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           A++ + GF   +  ++ N     +    +   ++V     +  +          ++ +  
Sbjct: 293 AAMFNYGFAKCSLYQEPNPDRTFQLKVLRGKESQVRGEYGKAFSYLDTSGRSLDKITQKT 352

Query: 315 DKESHFIDFEKITLLKNKIT 334
             +      +K   +   + 
Sbjct: 353 KLKELTAPVKKGDTVGKTVY 372


>gi|260459469|ref|ZP_05807724.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259035023|gb|EEW36279.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 387

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/328 (22%), Positives = 135/328 (41%), Gaps = 11/328 (3%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P  +     K     ++D +TG V+     D P  PAS+ KLMT  VVF+ +K  +  L 
Sbjct: 23  PAHAQLFETKAAQAFMIDADTGTVLFSKDADKPIQPASMAKLMTMEVVFNAIKSGRLKLD 82

Query: 78  TPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
               +S+NA          S    K  S++ L++ ++ + V++AND  + IAE +  +E 
Sbjct: 83  DTFVVSENAWRKGGAPSGTSTMFAKLKSSVRLEDLIQGVTVQAANDGCIVIAEGMAGSED 142

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   M   ++ +GL  + F+N+ G+   G  T+ R++  L+  +  ++P +  Y+ +K 
Sbjct: 143 NFAAQMTERARQIGLKTSTFVNSTGLPADGQQTSVRELTQLALHLWRNYPDFYRYYSLKD 202

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                    N N  +   +GADG+  G + ASGF IV S       +IA + G  +   R
Sbjct: 203 FTWNKISQRNRNPLLAMDIGADGLAVGASEASGFGIVGSVSHNGTRVIAALSGLANDKER 262

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE------VCTTQKEIINY 306
            + +  LL  G  +    +           Q        ++ +      +          
Sbjct: 263 AEEARKLLDWGVRSFEKTEIFAKDEVVGEAQVFGGAKSGVTLKAKGPIAIFLPITNRDKL 322

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNKIT 334
             ++       +   + + +  L+  I 
Sbjct: 323 TAKIVYNGPVAAPVEEGQPVGALRVWIG 350


>gi|291536082|emb|CBL09194.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis M50/1]
          Length = 348

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 87/312 (27%), Positives = 146/312 (46%), Gaps = 11/312 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++ +TG V+ E       +PAS+TK+MT  ++F  L  K+  L   +T+S+ A+    S 
Sbjct: 1   MEASTGAVVYEKNSHEARHPASVTKIMTLLLIFDALSSKQISLDDTVTVSEYAASMGGSQ 60

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G T T++  +K + V SAND  VA+AE +  +E +FV+ MN  +K LG++ T+F+
Sbjct: 61  VFLEPGETQTVETMIKCISVASANDACVAMAEHVAGSESEFVRMMNERAKGLGMNDTNFV 120

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNW 205
           N  G+   GH T+A D+A++S  + T +P+   Y  I    I              NTN 
Sbjct: 121 NCCGLDADGHMTSANDIALMSRELITKYPKIHDYCTIWMENITHTTAKGSSEFGLTNTNK 180

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +  +  A G+KTGFT  + + I A+A + D  LIAVI+GA D  +R+  + +LL+ GF 
Sbjct: 181 LIKHYQYATGLKTGFTNTAMYCISATAKKDDMELIAVIMGAPDIKSRSADATTLLNYGFG 240

Query: 266 N---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
                 D  +         +    +              +  +     K  +  E+    
Sbjct: 241 KCRIYCDSHEDKLDDLPVEKGLADSVGIIYQRPFQYMTTDGSDLTGITKSIELPENVTAP 300

Query: 323 FEKITLLKNKIT 334
            +K       + 
Sbjct: 301 VKKGNTAGKAVY 312


>gi|209885251|ref|YP_002289108.1| penicillin-binding protein 6 [Oligotropha carboxidovorans OM5]
 gi|209873447|gb|ACI93243.1| penicillin-binding protein 6 [Oligotropha carboxidovorans OM5]
          Length = 425

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 77/314 (24%), Positives = 127/314 (40%), Gaps = 8/314 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++  TG V+ E   D    P+S+ KLMTA V+F  L + +  LT    IS+
Sbjct: 62  DTDAPTAILIEAKTGSVLFEKNADELRAPSSMMKLMTAEVIFHALAKGEIKLTDEYRISE 121

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           NA          S       S +++D+ L  L ++S ND  +A+AE    +E  FV  M 
Sbjct: 122 NAWRRGGAPSGGSTMFAAIHSIVSVDDLLHGLAIQSGNDSCIALAEGYAGSESAFVAKMQ 181

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ +GL+ + F N +G+    +  + R++  L+  +   +P     F  +       +
Sbjct: 182 ARAREIGLARSTFGNTNGLPDPDNKMSVRELGHLARHLILTYPDLYKLFGEREFTWNKIR 241

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  + +  GADG+KTG+T   GF +V SA+Q    L+ V+ G  D   R   +  L
Sbjct: 242 QQNRNPLLASLDGADGLKTGYTKEGGFGMVGSAVQNGTRLVVVVNGLSDAADRAAAAKRL 301

Query: 260 LSMGFYNKTDRKKINYIIKDFY---QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           L  GF N   R          Y       +  +   + E      +    +        K
Sbjct: 302 LEWGFKNFETRTLFEANQTVGYGKVFGGDTGRIALHANEPVGVMVQRNGSDKINARIIYK 361

Query: 317 ESHFIDFEKITLLK 330
                  +    + 
Sbjct: 362 GPVRAPVQSGDRIG 375


>gi|89056340|ref|YP_511791.1| Serine-type D-Ala-D-Ala carboxypeptidase [Jannaschia sp. CCS1]
 gi|88865889|gb|ABD56766.1| Serine-type D-Ala-D-Ala carboxypeptidase [Jannaschia sp. CCS1]
          Length = 468

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 98/282 (34%), Positives = 149/282 (52%), Gaps = 4/282 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           F+  + +A+L     F ++A            ++D   G V+     D   +PASLTK+M
Sbjct: 2   FVRNLFVALLGVQILFGAVAPAQVNAAPYAAMVMDARNGEVLHSRNADTRLHPASLTKMM 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  ++  +  L T +T+S NA+  PPS      G+T+ L   L+   ++S ND A
Sbjct: 62  TLYIAFEAIRLGEITLDTEVTVSANAAAEPPSRLGLSAGTTIRLRYLLRAAAIRSGNDAA 121

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI E++  +E  F + M  T++ LG++ T F NAHG+ + GH +TARDM +L  R+  D
Sbjct: 122 TAIGEAISGSEAAFARRMTRTARALGMTRTTFRNAHGLTEDGHLSTARDMTMLGRRLVYD 181

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +PQY + F     +       NTN  V  T+ GADG+KTG+T A+GFN+VASA +G++ +
Sbjct: 182 YPQYYNLFSRVTADAGIATIRNTNRVVLTTYRGADGIKTGYTRAAGFNLVASAQRGEERI 241

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
           IA + G      RN+    LL MGF        +       Y
Sbjct: 242 IATVFGGRSSAWRNQRVMELLDMGFERAPSHVALRTPPLPTY 283


>gi|28211200|ref|NP_782144.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
 gi|28203640|gb|AAO36081.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
          Length = 395

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 25/360 (6%)

Query: 2   RQFLVIIAMAMLS--NIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           + F++ I +  +    + P    AE         +     L++ N+G +I E   +    
Sbjct: 6   KTFILTILLIFIFQCTVVPIRVKAEGEDKGEIQVEASSALLMEPNSGKIIYEKNANEKLP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALK 109
           PAS+TK+MT  +    +   K  LT  IT+S+N     +   S+     G   T++  LK
Sbjct: 66  PASVTKIMTMLIAMEAVDSGKIKLTDKITVSENAKKNGQGGNSSMLLDTGEIRTVEEILK 125

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            + + S ND A A+AE L  +E+ FV+ MN+ +K LG+  T+F N  G+ + GH TTA D
Sbjct: 126 GIAIASGNDAATAMAEYLDGSEEAFVKTMNDRAKALGMKNTNFKNCSGLPEEGHITTAYD 185

Query: 170 MAILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +A++S  +            +   I           N N  V  F G DG+KTG+T  + 
Sbjct: 186 IALMSKELLKHPTILKYTGTYMETISEGRKSPIGLVNHNKLVRFFKGCDGLKTGYTSEAK 245

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
           + I A+A++    ++ VI+GA +   RNK +++L++ GF    ++  I    +    +  
Sbjct: 246 YCISATAVRDGVRVLTVIMGAPNYKIRNKEASNLMNYGFSKFENKNIIKRDSEVEKVKLG 305

Query: 286 SNE------VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI---TLLKNKITKK 336
            +E            +V   +        +     DK+ +            + +K+  K
Sbjct: 306 KSEDKFFIAKALEDLDVVVERGSKDKITKKPIVNLDKKYYNKGEVVGHCEVYVGDKLIGK 365


>gi|310658666|ref|YP_003936387.1| serine-type d-ala-d-ala carboxypeptidase [Clostridium sticklandii
           DSM 519]
 gi|308825444|emb|CBH21482.1| Serine-type D-Ala-D-Ala carboxypeptidase precursor [Clostridium
           sticklandii]
          Length = 433

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 128/355 (36%), Gaps = 32/355 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            + I+ + +  +      I          L++ ++G ++ E   + P  PAS TK+MTA 
Sbjct: 11  IITILFLNLFISSSFASPIEPDISAEAAILIEIDSGEILYEKNANAPMYPASTTKIMTAL 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +           L   IT+ ++      S      G   T+   L  L+VKSAND AV +
Sbjct: 71  LALEH-----LNLEDKITVPEDMGPADGSAMYLLPGEVFTVRELLDGLLVKSANDAAVLL 125

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--- 180
           A ++    + F   MN  +K++G + T F N +G+    H  +A DMA+++     +   
Sbjct: 126 ARTISGDIQSFATLMNQRAKDIGCANTSFANPNGLHDPSHTISAHDMALIAREAMKNATF 185

Query: 181 -----------------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
                              +       + L    K   N  +    +   DG+KTG+T  
Sbjct: 186 RELVSQVNVTLNETPQTPEKRYFRNTNRFLWSTSKIIYNNEYIPIKYEVVDGIKTGYTGE 245

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKD 279
           +G  +V+S  + D  +I+V+  A       + S  LL  GF N   +  I        + 
Sbjct: 246 AGNCLVSSGKKNDIRVISVVFKA-SGYDVYRDSRLLLDYGFDNFEKKTLIKKDTVLGSQP 304

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               +  +      E       +  +               +   K  ++   + 
Sbjct: 305 INYSSQGSLEYGTKENFVVPYLK--SSLPVYNTKIMLNDLKLPISKGDIVGKLVI 357


>gi|299068147|emb|CBJ39364.1| D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
           [Ralstonia solanacearum CMR15]
          Length = 397

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 82/321 (25%), Positives = 148/321 (46%), Gaps = 15/321 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + L D  +G V+     D    PASLTKLMTAY+  + +++ K      +T ++
Sbjct: 38  QVAARAWMLTDVTSGQVLGGGNMDERIEPASLTKLMTAYLAVAAVRDGKLKYDQMLTPTE 97

Query: 85  --NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
              + +   S    + G  +++ + L+ LIV+S ND A+ +AE++  TE  FV  MN  +
Sbjct: 98  TVRSVKTDESRMFLQPGKPVSVRDLLQGLIVQSGNDAALVLAEAVGGTETNFVMLMNREA 157

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           + LG+  THFMNA G+    HYTTARD++IL+  +  DFP+   ++  K       K PN
Sbjct: 158 ERLGMKGTHFMNAAGLPDPNHYTTARDLSILTSALIRDFPEDYKFYSQKEFTYNNIKQPN 217

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNKV 255
            N  +      DG+KTG T ++G+ ++ SA +         + L++V++G      R + 
Sbjct: 218 RNRLLWIDPTVDGVKTGHTKSAGYCLITSAKRPLPDVPNASRRLLSVMIGTKSEQVRTQE 277

Query: 256 SASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQ 309
           S  +L+ G+      +           D Y+         ++E+  +   +         
Sbjct: 278 SLKVLNYGYQFFDTLRLYEAKQALQTPDVYKGQAKTVKLGVAEDKWITVPKGSGGRLKPV 337

Query: 310 MKEAKDKESHFIDFEKITLLK 330
           ++      +     +++  +K
Sbjct: 338 LERKDPLIAPIAQGQQLGTVK 358


>gi|146276594|ref|YP_001166753.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145554835|gb|ABP69448.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 473

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 1/270 (0%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           M  +       + +         ++D  TG  + E       +PASLTK+MT Y+ F  +
Sbjct: 12  MLFVVAAVVVAAQSAVAAPYAAIVMDARTGETLYETNARTRLHPASLTKMMTLYITFQAI 71

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           +  +  L + +T++KNA+  PPS    K G  + L   ++   VKSAND A AI E++  
Sbjct: 72  QRGEISLDSMVTVAKNAAAEPPSKLGLKSGQRIALRYLIRAAAVKSANDAATAICEAVGG 131

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E  F + MN T+K +G++ + F N HG+   GH +TA DM +L  R+  DFPQY + F 
Sbjct: 132 SEAAFTERMNRTAKAIGMTNSTFKNCHGLTAEGHLSTAYDMNMLGRRLFFDFPQYYNIFS 191

Query: 190 IKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            +  +       NTN      + GADG+KTG+T  +G+N+  SA +G++ +IA + G   
Sbjct: 192 RRTADAGVTTVSNTNRRFLDAYKGADGIKTGYTSPAGYNLTGSAQRGNKRIIATVFGGKS 251

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
              RN   A LL +GF       K+     
Sbjct: 252 TAHRNAKMAELLDLGFREAPANAKVRKPAP 281


>gi|188588716|ref|YP_001921477.1| penicillin-binding protein DacF [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498997|gb|ACD52133.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum E3
           str. Alaska E43]
          Length = 396

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 23/352 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           +++ +    + +L+ I   +             +     +     L++  TG V+ E  P
Sbjct: 5   IKRIISFTLIFVLTIILIPIGAVNASMLEDEVKAEGMNVEAKSALLIEPTTGKVVYEKNP 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  + PAS+TK+MT  +    +   K  L   +T S+NA +   S      G   +++  
Sbjct: 65  DEKFAPASVTKIMTMLLTMEAVDNGKIKLDDKVTCSENAKKMGGSTMLLDTGEIRSVEEL 124

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + S ND AVA+AE L  TE  FV  MN  ++ LG+  T F N +G+   GH +TA
Sbjct: 125 LKGVAIASGNDAAVALAEYLGGTESDFVGLMNKRAQELGMKNTVFKNCNGLPADGHLSTA 184

Query: 168 RDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           RD++++S  +            +   I        +  N N  V  F G DG+KTGFT  
Sbjct: 185 RDISLMSIELLKHPTILKYTGTYMDSISEGRKSPIELVNHNKLVRFFEGCDGLKTGFTNE 244

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           + + I A+A +    ++ VI+GA     RN+ +  LL+ GF     +K ++         
Sbjct: 245 AKYCISATATRNGVRMLTVIMGAPTYKIRNRDAGILLNHGFSKYEGKKIVSKDEDVEKVL 304

Query: 284 NLSNE----VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                    +    +++     +  N     K   ++      ++   ++  
Sbjct: 305 MDKQTDRFFMAKAKDDLTAILPKGSNGEISKKIVIEELKPE--YKMGDIVGK 354


>gi|229184724|ref|ZP_04311923.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BGSC 6E1]
 gi|228598738|gb|EEK56359.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BGSC 6E1]
          Length = 429

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 139/375 (37%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ II +  L         +       A   +     L++ N+G ++ E   D     
Sbjct: 12  KRFIAIITVLTLFCSITVISGSASAETVSAIEVEAGSAVLVEANSGKILYEKNADELLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   ++  K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVENGKLKWNQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQQGGKYPIDMTNFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +A +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTAERNGMRLISVVIKANSHAARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              RK                      + V    + V     +      + +     +  
Sbjct: 312 FEVRKVNEKDSVVNGHETVRIANAKDKDVVVQTKQAVSLPILKSNKDVYKKEFKVLNKEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISKMII 386


>gi|291559238|emb|CBL38038.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SSC/2]
          Length = 399

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 20/355 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLS--------IAE--TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +  L++ A+ + S   P ++         A           +++  +  ++     D   
Sbjct: 5   KAILLVAAILVQSFYCPVMAREARFLETAAPVLDLSAKSAVVMEQESKEILFAKDKDKEL 64

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+M+  ++F  LK+ K  LT  +T+S++A+    S    + G    +   +K +
Sbjct: 65  APASVTKIMSLLLIFEDLKQGKIKLTDTVTVSEHAASMGGSQVFLETGEKQQVQTLIKCV 124

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAND  VA+AE +C +E+ FV  MN  ++ LG+  T F NA G+   GH T+A D+A
Sbjct: 125 VISSANDAVVALAEHVCGSEEAFVSRMNKKARELGMKHTTFQNACGLDAKGHVTSAYDIA 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEI--------KGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           +++  +   +P+   Y +I    I        K     NTN  +  + G  GMKTG T  
Sbjct: 185 LMTRELAQRYPEVFKYTKIWMDTIIHKTKKGEKEFGLSNTNKLIRQYHGCTGMKTGSTGK 244

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR--KKINYIIKDFY 281
           +GF + A+A +    +IAV++G      R K +  LL  GF N      +     I    
Sbjct: 245 AGFCLSATATRNKIHMIAVVMGCESSKARIKDARILLDYGFSNCQRIHSETTRKEIGRIP 304

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            Q       +  E+V     +I     ++ +    +S     +K   +      K
Sbjct: 305 VQKGQRSEVSCQEKVTADLIDIKTQKGKIVKKIKIDSVKAPVKKGQKIGEIQYSK 359


>gi|255262711|ref|ZP_05342053.1| D-alanyl-D-alanine carboxypeptidase family protein [Thalassiobium
           sp. R2A62]
 gi|255105046|gb|EET47720.1| D-alanyl-D-alanine carboxypeptidase family protein [Thalassiobium
           sp. R2A62]
          Length = 465

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 102/296 (34%), Positives = 154/296 (52%), Gaps = 5/296 (1%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M+ +I   ++ A         ++D  TG V+     D   +PASLTK+MT Y+ F  ++ 
Sbjct: 1   MILSIPVRVAAAP----YAAMVIDARTGEVLHSRNADTRLHPASLTKMMTLYIAFQAVER 56

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L T ITI + A+  PPS    + G  + L   ++   VKSAND A AI  ++  +E
Sbjct: 57  GELSLDTMITIPRVAANEPPSKLGLRAGQKIRLRYLIRGAAVKSANDAATAIGVAISGSE 116

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F + M  T++ +G+S T F NAHG+ ++GH +TARDM  L   +  D+PQY + F  +
Sbjct: 117 AAFARRMTRTAEAMGMSRTTFKNAHGLTENGHMSTARDMTNLGRHMIYDYPQYYNLFSRR 176

Query: 192 GLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
             +   ++  NTN   +G + GADG+KTG+T A+GFN+VASA +G + +IA + G     
Sbjct: 177 SADAGVREVANTNRRLLGNYRGADGIKTGYTRAAGFNLVASAERGQERVIATVFGGRSSA 236

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
           TRN   A LL MGF     R  +       Y  N  +      E    T  ++I  
Sbjct: 237 TRNDRVAELLDMGFARAPARAALRRPSLPRYTGNGGSAPSPTQEYAPGTAGKVIRV 292


>gi|225076059|ref|ZP_03719258.1| hypothetical protein NEIFLAOT_01091 [Neisseria flavescens
           NRL30031/H210]
 gi|224952619|gb|EEG33828.1| hypothetical protein NEIFLAOT_01091 [Neisseria flavescens
           NRL30031/H210]
          Length = 405

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 32/363 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS--------------------------IAETNKLPYYTLL 34
           M++ L+ +  A L N     +                                   Y + 
Sbjct: 2   MKKTLLSLIFAALLNTHALAADPVASGPAVQSEAQTQPLLRSINSPTTPPEIAATAYIVT 61

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D ++   +A N  D P  PA+LT++MTAY+ F  L+         +T+S    +   S  
Sbjct: 62  DLHSKQTLASNNADTPIEPAALTQMMTAYLAFKALENGTLQADQMLTVSNVGWKVEGSRM 121

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFM 153
                  +++ + +K   ++SAND A+ +AE+    +  +FV+ MN  +K LG+  THF 
Sbjct: 122 FLNPKVPVSVSSLIKGTTIQSANDAAITLAEALGNGSVDEFVKQMNEEAKRLGMKHTHFN 181

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           N  G+  +GH +T  D+AIL+  +  D+P+Y   F  K  +    + PN N  +      
Sbjct: 182 NPTGISSNGHVSTVGDLAILAAALINDYPKYYPLFANKSFKYNNIEQPNRNLLLYRDSSI 241

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTG++  +G+++ AS+ + ++ +++++ GA     R   S+ LL+         K  
Sbjct: 242 DGLKTGYSEGAGYHLAASSKRNNRRIVSILAGAESTEARASESSKLLNWSLQAFDTPKLY 301

Query: 274 NYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                      Y+ +         ++V  T       N +    +  +      EK  +L
Sbjct: 302 KGGEVISQVKVYKGSTKAVDIGFLDDVYITIPHDTGKNVKP-ILETLQPVLAPIEKGQVL 360

Query: 330 KNK 332
              
Sbjct: 361 GKL 363


>gi|254509295|ref|ZP_05121387.1| penicillin-binding protein 6 [Vibrio parahaemolyticus 16]
 gi|219547783|gb|EED24816.1| penicillin-binding protein 6 [Vibrio parahaemolyticus 16]
          Length = 293

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 16/293 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFL------------SIAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++  +I ++   S                    A       Y L+D ++G V+AE   +
Sbjct: 1   MKKTTLIKSVFASSIALSATFATSAIATPIVVPDAPQIAAKGYVLMDFHSGKVLAEKEMN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLD 105
              +PASLTK+MT+YV+   L+     L   +TISKNA        S    + G+T+ ++
Sbjct: 61  TKLSPASLTKMMTSYVIGQELERGNISLQDDVTISKNAWAKNFPDSSKMFIEVGTTVKVE 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           +  + +I++S ND  VA+AE +  +E  FV  MN  +  +G+  THF N HG+     Y+
Sbjct: 121 DLNRGIIIQSGNDACVAMAEHIAGSEDAFVDLMNAWADTIGMKDTHFANVHGLDNPDLYS 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCAS 224
           T  DMA+L   +  D P     +  K     G    N N       +  DG+KTG T  +
Sbjct: 181 TPYDMALLGSALIRDVPDEYRIYSEKKYTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNA 240

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           G+++V+SA +G   L+AV++G  + N R   S  LLS GF             
Sbjct: 241 GYSLVSSATEGKMRLVAVVMGTKNANARKSESKKLLSYGFRFFETVAPHKAGE 293


>gi|84499966|ref|ZP_00998232.1| D-alanyl-D-alanine carboxypeptidase [Oceanicola batsensis HTCC2597]
 gi|84391900|gb|EAQ04168.1| D-alanyl-D-alanine carboxypeptidase [Oceanicola batsensis HTCC2597]
          Length = 406

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 11/317 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     ++D  T  V+ +   D P  PAS++KLMT Y+ F  L++ +  L   + +S
Sbjct: 30  FDTQARAAYVMDLTTRTVLLDKNADMPLPPASMSKLMTLYIAFEALRDGRLRLDEELPVS 89

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFVQHMNNT 141
            +A  Y  S         + +++ L+ +IV S ND  V +AE+L     E  F ++M   
Sbjct: 90  SHAMSYGGSTMFLDTTDRVKVEDLLRGIIVLSGNDACVVLAEALSPDGTEAGFARYMTQR 149

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK---GK 198
           ++ +G++ + F N++G    GH  + RD+A+L+ R+  DFP +   F  +         +
Sbjct: 150 AQKMGMTNSTFANSNGWPAAGHRMSMRDLALLAARLIEDFPNFYPLFAERTFAFDGRAPQ 209

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              N N  +G  +GADG+KTG T  +G+ +V SA QGD+ +I  + G      R + S +
Sbjct: 210 NNTNRNPLLGLGIGADGLKTGHTEEAGYGLVGSAKQGDRRVIFALSGLPTTAARAQESEA 269

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV------CTTQKEIINYNTQMKE 312
           +++  F   T +  +              +VP +S                     ++  
Sbjct: 270 IINWAFRQFTQKSLLKAGETVTKATVHMGDVPTVSLTTEDDLTALLPVLAGDEIPAEVVY 329

Query: 313 AKDKESHFIDFEKITLL 329
                +     + +  L
Sbjct: 330 NGPISAPVALGQPVAEL 346


>gi|253578836|ref|ZP_04856107.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849779|gb|EES77738.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 399

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 165/363 (45%), Gaps = 30/363 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVIA 43
           ++++ II   ++        +                      + P   L++  TG V+ 
Sbjct: 3   KKWISIICAILIMVCTITTPVYAAGIFLPEESNTRQAESTDLIEAPSGILMEAQTGTVVY 62

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           +   D   +PAS+TK+MT  ++F  L +    +   +T S +A     S    ++G   T
Sbjct: 63  QKDADTRRSPASITKIMTLILIFDALDKGSLKMDDTVTTSAHAKSMGGSQVFLEEGEIQT 122

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHG 162
           ++  +K +++ S ND +VA+AE +C +E++FV+HMN  ++ LG+  THF +  G+     
Sbjct: 123 VETLIKCIVIASGNDASVAMAEHICGSEQEFVRHMNERAEGLGMKNTHFEDCCGLTESPD 182

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGAD 214
           HYTTARD+AI+S  + T +P+ + Y  I    I              NTN  + ++ G  
Sbjct: 183 HYTTARDIAIMSRELITKYPKILEYSSIWMENITHVTRQGTKEFGLTNTNKLIRSYEGCV 242

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR--KK 272
           G+KTG T  + + + A A + D +LIAV++ A D   R K +AS+L+ GF   +    KK
Sbjct: 243 GLKTGSTSIAKYCLSAVAKRNDITLIAVVMAAPDYKVRFKDAASMLNYGFSKCSLYIDKK 302

Query: 273 INYIIKDFYQQNLSNEVPNI-SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
           +  + +   +      V  +  E+         N     ++ +         +K TL   
Sbjct: 303 MEALPEIPVRNGKKKTVSLVYEEQFHYLDTTGQNIGNVKRKLRIHREVKAPVKKNTLAGE 362

Query: 332 KIT 334
            I 
Sbjct: 363 MIY 365


>gi|222148588|ref|YP_002549545.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Agrobacterium vitis S4]
 gi|221735574|gb|ACM36537.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Agrobacterium vitis S4]
          Length = 411

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 84/358 (23%), Positives = 147/358 (41%), Gaps = 23/358 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE------------TNKLPYYTLLDTNTGHVIAENYPDH 49
           R+ +V++A           + A+              +     L++  TG V+ E   D 
Sbjct: 20  RKIVVLLAALFYGASLQTSAFAQAAATDAATPAVYATEAKQVLLIEAETGSVLFEKNSDQ 79

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTL 104
           P+  ASL+K+M A VV   LK  +  L+    +S+ A     +            S + +
Sbjct: 80  PFTSASLSKMMVAEVVLDALKSGRLTLSQDFPVSEFAWRTGGAPSRTATMFAAVRSRVPV 139

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           +  LK ++V+ AND  + +AE +  +E+ FV+ MN  +  LGL  +HF NA G+   G+ 
Sbjct: 140 EALLKGVMVQMANDACLILAEGMAGSEQGFVKLMNERAAALGLKDSHFANATGLPDPGNK 199

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
            + RDM  L+  +K+++P +   +     E       N N  +G   G DG+  GF    
Sbjct: 200 VSLRDMITLAQALKSNYPDFYALYAQPDFEWNKIFQRNRNRLLGQSPGVDGLAAGFADGE 259

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFY 281
           G++IVASA Q    L   + G+    +R + +A  L+ GF     R+         +   
Sbjct: 260 GYSIVASAQQNGVRLYLGLAGSESDKSRQEDAAKALAWGFSAFEKRRLFEAGQVIGEASV 319

Query: 282 QQNLSNEVPNISE---EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 +VP +S    +V            ++             +++  LK  +  K
Sbjct: 320 YGGEPAQVPLVSPQPVDVYLPVGASDKLEAKVIYPWPLRPGVAQGQQVGHLKVMLGDK 377


>gi|254456113|ref|ZP_05069542.1| serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207083115|gb|EDZ60541.1| serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 383

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/343 (25%), Positives = 154/343 (44%), Gaps = 16/343 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L+ I + +    F   +     K     LLD ++  ++ E  PD    PAS+TK+MT
Sbjct: 3   KKILIYIILCLPLTNFA--NANFDVKARTAILLDYHSDEILYEKDPDRKIFPASMTKIMT 60

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           + + F  +K  +  L     +S+NA        S+     G  ++++N LK +I+ S ND
Sbjct: 61  SIIAFDLIKNGELSLDDKFIVSENAWRLSESGYSSMFIMVGDQISVENLLKGIIISSGND 120

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             VA+AE +  TE +F   M   +K +G+  T+F N+ G+    + +T RD+ I+S  + 
Sbjct: 121 ACVALAEGIAGTEDEFAILMTEKAKEIGMENTNFSNSSGINSPDNLSTVRDIMIMSKYLI 180

Query: 179 TDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            ++P Y  YF+ K               N N  +   L ADG+KTG+     +++ +S  
Sbjct: 181 KNYPDYYKYFKEKKFTWDRTGGDPITQGNRNPLLYKNLDADGIKTGYLSYEKYSLASSIN 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEV 289
           +  + LIAV  G   +N+R++ S  LL+ G  N    +           D +    +   
Sbjct: 241 RNGRRLIAVGSGFNSKNSRSRESIKLLTYGLTNYDLVQITKANEPFYKIDVWLGKENFVQ 300

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKD--KESHFIDFEKITLLK 330
               +++  T K+      ++    D   E+     EKI  LK
Sbjct: 301 SYARQDIYKTIKKAKKKLLKVSVNYDGPIEAPIKKNEKIATLK 343


>gi|254560273|ref|YP_003067368.1| serine-type D-alanyl-D-alanine carboxypeptidase [Methylobacterium
           extorquens DM4]
 gi|254267551|emb|CAX23393.1| serine-type D-alanyl-D-alanine carboxypeptidase precursor
           [Methylobacterium extorquens DM4]
          Length = 501

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 6/295 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  L+ +      A     P   ++D  +G V+       PW PAS+TKLMT YV    
Sbjct: 9   LIGSLTALGLMAGAASAVTAPI-LVVDAESGKVLYSQGATDPWYPASITKLMTTYVALDM 67

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +++ K  L T +T+S  A+  PPS   FK G+ +TLDNALK+++VKSAND++ AI E L 
Sbjct: 68  VRQGKVSLDTLLTVSPAAAAEPPSKMGFKPGTQITLDNALKIIMVKSANDVSWAIGEGLG 127

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + + F   MN T+  +G+  + + N +G+ +   +T+ARDMA+L+  +  DFP   + F
Sbjct: 128 GSVEGFADMMNETAHRIGMRESRWYNPNGLPEPRQWTSARDMAVLARALMRDFPNQQNLF 187

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            I  ++       N N  +G + GADGMKTGF C+ GFN+VA+A +G + +I V++G   
Sbjct: 188 SISAIQFGKSVMANHNGLLGRYPGADGMKTGFICSGGFNVVATATRGGRRIITVVMGQPS 247

Query: 249 RNTRNKVSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
              R+  +A L   GF  +          +      +     P++   +C  +K 
Sbjct: 248 ARERDIKAADLFDYGFGQSAGWTAPTLESLPP----SNVAAPPDMRPYICDKRKP 298


>gi|218529374|ref|YP_002420190.1| serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           chloromethanicum CM4]
 gi|218521677|gb|ACK82262.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           chloromethanicum CM4]
          Length = 496

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 6/295 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  L+ +      A     P   ++D  +G V+       PW PAS+TKLMT YV    
Sbjct: 9   LIGSLTALGLMAGAASAVTAPI-LVVDAESGKVLYSQGATDPWYPASITKLMTTYVALDM 67

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +++ K  L T +T+S  A+  PPS   FK G+ +TLDNALK+++VKSAND++ AI E L 
Sbjct: 68  VRQGKVSLDTLLTVSPAAAAEPPSKMGFKPGTQITLDNALKIIMVKSANDVSWAIGEGLG 127

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + + F   MN T+  +G+  + + N +G+ +   +T+ARDMA+L+  +  DFP   + F
Sbjct: 128 GSVEGFADMMNETAHRIGMRESRWYNPNGLPEPRQWTSARDMAVLARALMRDFPNQQNLF 187

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            I  ++       N N  +G + GADGMKTGF C+ GFN+VA+A +G + +I V++G   
Sbjct: 188 SISAIQFGKSVMANHNGLLGRYPGADGMKTGFICSGGFNVVATATRGGRRIITVVMGQPS 247

Query: 249 RNTRNKVSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
              R+  +A L   GF  +          +      +     P++   +C  +K 
Sbjct: 248 ARERDIKAADLFDYGFGQSAGWTAPTLESLPP----SNVAAPPDMRPYICDKRKP 298


>gi|163850650|ref|YP_001638693.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           extorquens PA1]
 gi|163662255|gb|ABY29622.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           extorquens PA1]
          Length = 501

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 6/295 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  L+ +      A     P   ++D  +G V+       PW PAS+TKLMT YV    
Sbjct: 9   LIGSLTALGLMAGAASAVTAPI-LVVDAESGKVLYSQGATDPWYPASITKLMTTYVALDM 67

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +++ K  L T +T+S  A+  PPS   FK G+ +TLDNALK+++VKSAND++ AI E L 
Sbjct: 68  VRQGKVSLDTLLTVSPAAAAEPPSKMGFKPGTQITLDNALKIIMVKSANDVSWAIGEGLG 127

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + + F   MN T+  +G+  + + N +G+ +   +T+ARDMA+L+  +  DFP   + F
Sbjct: 128 GSVEGFADMMNETAHRIGMRESRWYNPNGLPEPRQWTSARDMAVLARALMRDFPNQQNLF 187

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            I  ++       N N  +G + GADGMKTGF C+ GFN+VA+A +G + +I V++G   
Sbjct: 188 SISAIQFGKSVMANHNGLLGRYPGADGMKTGFICSGGFNVVATATRGGRRIITVVMGQPS 247

Query: 249 RNTRNKVSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
              R+  +A L   GF  +          +      +     P++   +C  +K 
Sbjct: 248 ARERDIKAADLFDYGFGQSAGWTAPTLESLPP----SNVAAPPDMRPYICDKRKP 298


>gi|27376431|ref|NP_767960.1| penicillin-binding protein [Bradyrhizobium japonicum USDA 110]
 gi|27349571|dbj|BAC46585.1| bll1320 [Bradyrhizobium japonicum USDA 110]
          Length = 487

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 98/281 (34%), Positives = 156/281 (55%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L++ ++G V+  +    PW PAS+TK+MTAYV    +K+ +  L T +T+S  A+ 
Sbjct: 34  EALLLIEADSGKVLQADNATIPWYPASVTKIMTAYVTLKAVKDGRLTLDTLLTVSPTAAS 93

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
             PS   F+ G+ +T+DNALK+++VKSAND+AV +AE +  +   F   MN+T+K LG++
Sbjct: 94  QSPSKMGFRPGTQLTVDNALKMMMVKSANDMAVVLAEGVGGSIDGFSVMMNDTAKKLGMT 153

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T ++N +G+   G  T+ARD+ IL+     D P+Y ++  I  +    +   N N  +G
Sbjct: 154 QTSYVNPNGLPADGQITSARDLGILARSFLRDLPEYEYFVHIPAIRFGKRVTGNFNKLIG 213

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + GADG KTGF CASG+N+VASA +  + LIAV+LGA     R   +A LL  GF    
Sbjct: 214 RYPGADGFKTGFICASGYNLVASATRNGRRLIAVVLGANSGTARAVKAAQLLERGFSQDN 273

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
                  +        +    PN+ +++C   ++    +  
Sbjct: 274 LSWLRPSLGTVENLVPVDASPPNLRDDMCGGHRKRPASDDD 314


>gi|32490923|ref|NP_871177.1| hypothetical protein WGLp174 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166129|dbj|BAC24320.1| dacA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 410

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 154/354 (43%), Gaps = 20/354 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLS---------IAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           ++FL I     +  +F   +                  Y L+D  +G V+AE   D    
Sbjct: 17  KKFLEIFKFITIIYLFIGKTYSEQYNVEIKPPKINAESYILIDYYSGQVLAEMNADSKRL 76

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE------YPPSNSTFKKGSTMTLDN 106
           PASLTK+MT+Y++  ++K      +  + ISK +           S+   K G  +++ +
Sbjct: 77  PASLTKMMTSYIIGMYIKSGHIKSSDLVKISKESWMLGNPSLKGSSSMFLKPGDLVSISD 136

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VAIA  +   ++ FV+ MNN +K L L  THF N HG+   G +T+
Sbjct: 137 LSRGIILQSGNDACVAIANYISGNQESFVELMNNYAKKLKLKNTHFKNVHGLDNAGQFTS 196

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASG 225
           ARDM+I+   +  D  +    ++ K       +  N N       L  DG+KTG T  +G
Sbjct: 197 ARDMSIIGTYLIKDVHEEYIKYKEKEFTYNNIRQLNRNNLLWDKTLNVDGIKTGHTKLAG 256

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--- 282
           +N+VASAI  +  LI+VILG    N R+  S SLL+ G  +      +    K   +   
Sbjct: 257 YNLVASAINENMRLISVILGGRSINERDNGSKSLLNWGLRSFNTILFLRSNEKFVKKYIF 316

Query: 283 -QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +     +  ++  T         +++      +     +K   +     K
Sbjct: 317 FGKTNYAYLGVKNDIYITVPRGKEKEIKIEYIFFDSTLKAPLKKYQQVGKIFFK 370


>gi|307292800|ref|ZP_07572646.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingobium
           chlorophenolicum L-1]
 gi|306880866|gb|EFN12082.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingobium
           chlorophenolicum L-1]
          Length = 387

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 138/349 (39%), Gaps = 20/349 (5%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++    ++ + +LS      +   T++ P   L D ++G V+ +   +    PAS+ K+
Sbjct: 1   MKKSVAALLFVGLLSQPLTAAAPPYTSEAPIAYLKDMSSGAVLYDKGGETRMPPASMAKM 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLIVK 114
           MTA+V F  +++    L    T+     +        S      G  ++++N L  ++  
Sbjct: 61  MTAHVAFRLIQKGDLKLDQKFTVRPETWQQWHGPQAGSTMFLSPGEQVSVENLLHGIVTL 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAIL 173
           S ND  V +AE +  TE+ FV  MN  +K LGL  ++F  ++G    G  Y TA D+A L
Sbjct: 121 SGNDACVVLAEGIAGTEQAFVALMNQEAKRLGLKNSNFGTSNGWPDEGVTYVTAADLASL 180

Query: 174 SWRIKTDFPQYM-HYFQIKGLEIKGKK------YPNTNWAVGTFLGADGMKTGFTCASGF 226
           +     + P     ++  +                N N  +G   GADG+KTG T  +G+
Sbjct: 181 AEATIEETPSLYKKFYATRAFTWGKTMGGADIEQGNRNPILGKVAGADGLKTGHTEEAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
               SA Q  + L+ V+ G    N R   S   +  GF     +            +   
Sbjct: 241 GFTGSAEQEGRRLVMVVAGLTSANQRIAESVRFMDWGFRAWKAQPLFKKGQTVETAEVQL 300

Query: 287 NEVPNISEE------VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                ++        V   +      + ++      ++     +KI  L
Sbjct: 301 GSATRVALVAPQDMAVTLPRAASSGISVKVAYTGPIKAPIAKGQKIAQL 349


>gi|225864479|ref|YP_002749857.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus cereus 03BB102]
 gi|225790585|gb|ACO30802.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus cereus 03BB102]
          Length = 424

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 139/375 (37%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ II +  L         +       A   +     L++ N+G ++ E   D     
Sbjct: 7   KRFIAIITVLTLFCSITVISGSASAETVSAIEVEAGSAVLVEANSGKILYEKNADELLAI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   ++  K      + IS+ A +     S          + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVENGKLKWNQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 127 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 186

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 187 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQQGGKYPIDMTNFNWMLKGL 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +A +    LI+V++ A     R   +  L   GF N
Sbjct: 247 IKQYEGVDGLKTGTTPEAGDCFTGTAERNGMRLISVVIKANSHAARFDETKKLYDYGFAN 306

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              RK                      + V    + V     +      + +     +  
Sbjct: 307 FEVRKVNEKDSVVNGHETVRIANAKDKDVVVQTKQAVSLPILKSNKDVYKKEFKVLNKEQ 366

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 367 EAPIKKGVTISKMII 381


>gi|240137704|ref|YP_002962175.1| serine-type D-alanyl-D-alanine carboxypeptidase precursor
           [Methylobacterium extorquens AM1]
 gi|240007672|gb|ACS38898.1| serine-type D-alanyl-D-alanine carboxypeptidase precursor
           [Methylobacterium extorquens AM1]
          Length = 501

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 6/295 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  L+ +      A     P   ++D  +G V+       PW PAS+TKLMT YV    
Sbjct: 9   LIGSLTALGLMAGAASAVTAPI-LVVDAESGKVLYSQGATDPWYPASITKLMTTYVALDM 67

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +++ K  L T +T+S  A+  PPS   FK G+ +TLDNALK+++VKSAND++ AI E L 
Sbjct: 68  VRQGKVSLDTLLTVSPAAAAEPPSKMGFKPGTQITLDNALKIIMVKSANDVSWAIGEGLG 127

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + + F   MN T+  +G+  + + N +G+ +   +T+ARDMA+L+  +  DFP   + F
Sbjct: 128 GSVEGFADMMNETAHRIGMRESRWYNPNGLPEPRQWTSARDMAVLARALMRDFPNQQNLF 187

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            I  ++       N N  +G + GADGMKTGF C+ GFN+VA+A +G + +I V++G   
Sbjct: 188 SISAIQFGKSVMANHNGLLGRYPGADGMKTGFICSGGFNVVATATRGGRRIITVVMGQPS 247

Query: 249 RNTRNKVSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
              R+  +A L   GF  +          +      +     P++   +C  +K 
Sbjct: 248 ARERDIKAADLFDYGFGQSAGWTAPTLESLPP----SNVAAPPDLRPYICDKRKP 298


>gi|325982052|ref|YP_004294454.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrosomonas sp. AL212]
 gi|325531571|gb|ADZ26292.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrosomonas sp. AL212]
          Length = 415

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 170/333 (51%), Gaps = 10/333 (3%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            ++  I + +L      L+           ++D +TG V+ E+  D    PASLTK+MT 
Sbjct: 12  IYVFAIFLLLLIVSDSALANPR----YSSIVIDADTGAVLHESNADANRYPASLTKMMTL 67

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++++K  + T + +S +A+  P +N   + G ++++ +A+  LIV+SAND+A  
Sbjct: 68  YMLFEAMEQRKMTVDTRMPVSTHAAAMPQTNIGLRTGDSISVRDAIPALIVRSANDVAAV 127

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE+L K+E  F + M + ++ LG+ +T F NA G+      TTARDM  LS R+  DFP
Sbjct: 128 VAEALGKSEANFGRMMTDKARQLGMRSTTFRNASGLPNLEQKTTARDMVTLSTRLMKDFP 187

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y HYF  +    KG  Y + N  V    G DG+KTGF  ASGFN+  SA +G++ ++AV
Sbjct: 188 KYYHYFSTQSFSYKGITYNSHNRMVRNTSGVDGLKTGFIRASGFNVATSAKRGNRRVVAV 247

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           ++G      R++  A L+   F         N  I+       +  V   + ++      
Sbjct: 248 VMGGNTAAARDQHMAQLIDRSFNQ------GNRTIQVASNSKNARAVAVTAVKMNAPTPA 301

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +  Y  Q K ++   +       ++    ++ K
Sbjct: 302 LKPYPEQPKASESIVTQQYVVPPVSAQPVQLQK 334


>gi|187932841|ref|YP_001886556.1| penicillin-binding protein DacF [Clostridium botulinum B str.
           Eklund 17B]
 gi|187720994|gb|ACD22215.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum B
           str. Eklund 17B]
          Length = 396

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 23/352 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           +++ +    + +L+ I   +             +     +     L++  TG V+ E  P
Sbjct: 5   IKRIISFTLIFVLTIILIPIGAVNASMLEDEVKADGMNVEAKSALLIEPTTGKVVYEKNP 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  + PAS+TK+MT  +    +   K  L   +T S+NA +   S      G   +++  
Sbjct: 65  DEKFAPASVTKIMTMLLTMEAIDNGKIKLDDKVTCSENAKKMGGSTMLLDTGEIRSVEEL 124

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + S ND AVA+AE L  TE  FV  MN  ++ LG+  T F N +G+   GH +TA
Sbjct: 125 LKGVAIASGNDAAVALAEYLGGTESDFVGLMNKRAQELGMKNTVFKNCNGLPADGHLSTA 184

Query: 168 RDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           RD++++S  +            +   I        +  N N  V  F G DG+KTGFT  
Sbjct: 185 RDISLMSIELLKHPTILKYTGTYMDSISEGRKSPIELVNHNKLVRFFEGCDGLKTGFTNE 244

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           + + I A+A +    ++ VI+GA     RN+ +  LL+ GF     +K ++         
Sbjct: 245 AKYCISATATRNGVRMLTVIMGAPTYKIRNRDAGILLNHGFSKYEGKKIVSKDEDVEKVL 304

Query: 284 NLSNE----VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                    +    +++     +  N     K   ++      ++   ++  
Sbjct: 305 MDKQTDRFFMAKAKDDLTAILPKGSNGEISNKIVIEELKPE--YKMGDIVGK 354


>gi|228943820|ref|ZP_04106207.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228815844|gb|EEM62078.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 443

 Score =  184 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGKMVI 385


>gi|87199959|ref|YP_497216.1| Serine-type D-Ala-D-Ala carboxypeptidase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87135640|gb|ABD26382.1| Serine-type D-Ala-D-Ala carboxypeptidase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 391

 Score =  184 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/352 (25%), Positives = 139/352 (39%), Gaps = 23/352 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------NKLPYYTLLDTNTGHVIAENYPD 48
           MR   V +A  ++    P  + A                 P   L+D+ +G  +      
Sbjct: 1   MRLKFVAVAAGLIVGAMPVQAAAPEVGLDAAMTSLPRIDAPIALLVDSGSGRTLYARDVH 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLD 105
             + PAS+TK+MT+YV F  +++ K  L   I+I            S       +  T+ 
Sbjct: 61  RRFVPASITKIMTSYVAFDLVRKGKLRLDQRISIRPETFRKWKNVGSTMFLPAEAQPTVA 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH-Y 164
             ++ ++  SAND  V +AE    +   F + MN  +  LG+  +HF   +G +  G  Y
Sbjct: 121 ELIEGIVTVSANDACVVLAEGAVGSVPAFTRLMNEAALQLGMRDSHFNTPNGWMDEGQTY 180

Query: 165 TTARDMAILSWRIKTDFPQYMH-YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            TA D+A LS  + T FP     ++    +   G   PN N   G   GADG+KTGFT  
Sbjct: 181 VTADDLAKLSGALMTRFPDLYKRFYGHATMTWNGITQPNHNPLYGHTEGADGVKTGFTNE 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DF 280
           +G+  V SA +G + LI V+ G      R   S +L+  GF                   
Sbjct: 241 AGYGFVGSAERGGRRLIMVLGGYDRPIDRTNQSRALIEWGFSAWESHPLFKAGAPVGVAE 300

Query: 281 YQQNLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            Q     +V  ++     V T Q +   Y   ++      +     E +  L
Sbjct: 301 VQGGAERQVSLVAPRALGVTTPQGQKPRYTLSIRYKGPLRAPIAKGETVASL 352


>gi|56418545|ref|YP_145863.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus kaustophilus
           HTA426]
 gi|261417510|ref|YP_003251192.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC61]
 gi|319765168|ref|YP_004130669.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC52]
 gi|461913|sp|Q05523|DACA_BACST RecName: Full=D-alanyl-D-alanine carboxypeptidase dacA;
           Short=CPase; Short=DD-carboxypeptidase;
           Short=DD-peptidase; AltName: Full=Penicillin-binding
           protein 5; Short=PBP-5; Flags: Precursor
 gi|580849|emb|CAA48577.1| D-alanine carboxypeptidase [Geobacillus stearothermophilus]
 gi|56378387|dbj|BAD74295.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus kaustophilus
           HTA426]
 gi|261373967|gb|ACX76710.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC61]
 gi|317110034|gb|ADU92526.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. Y412MC52]
          Length = 452

 Score =  184 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 143/382 (37%), Gaps = 46/382 (12%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFL------SIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           MR+        ++++ +     PF       S     +     L+D  TG ++ E   D 
Sbjct: 1   MRRRKQNWLFWLLSICLCLTFGPFQQTVKAESAPLDIRADAAILVDAQTGRILYEKNIDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS+TK+MT Y++   +K K+       T S          +             ++
Sbjct: 61  VLGIASMTKMMTEYLLLDAIKAKRVKWDQMYTPSDYVYRLSQDRALSNVPLRKDGKYTVR 120

Query: 110 LLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            L    A   A     ++ +    +EK FV+ MN+ +K LGL    F+NA G+       
Sbjct: 121 ELYEAMAIYSANGATVAIAEIIAGSEKNFVKMMNDKAKELGLKDYKFVNATGLSNKDLKG 180

Query: 159 -------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA 206
                      +  +AR MA+L++R+  D P+ +    I     +       K  N NW 
Sbjct: 181 FHPEGTSTNEENVMSARAMAMLAYRLLKDHPEVLKTASIPHKVFREGTKDEIKMDNWNWM 240

Query: 207 ----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVS 256
               V  + G DG+KTG+T  +G     +A +    LI+V++ A        +  R K +
Sbjct: 241 LPGLVYGYEGVDGLKTGYTEFAGNCFTGTAKRNGVRLISVVMNAKDASGKTTKEARFKET 300

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
             L + GF   +         +   ++ L        E    T K +       +E + K
Sbjct: 301 EKLFNYGFNQYSLETLYPKGYQLKGKETLPVVKGKEKEVRVATGKNLDLLVKNGEEKQYK 360

Query: 317 ESHFIDFEKITLLKNKI--TKK 336
             + +D +K+T     +   KK
Sbjct: 361 PVYVLDKKKMTKEGKLVAPLKK 382


>gi|301051750|ref|YP_003789961.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis CI]
 gi|300373919|gb|ADK02823.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 435

 Score =  184 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 4   KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 64  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 124 AMAIFSANGATIALAEAIASKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 183

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 184 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 243

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 244 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 303

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 304 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 363

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 364 APIKKGAALGQMVI 377


>gi|229074074|ref|ZP_04207123.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-18]
 gi|229094734|ref|ZP_04225742.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-29]
 gi|228688672|gb|EEL42542.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-29]
 gi|228709037|gb|EEL61161.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-18]
          Length = 444

 Score =  184 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 141/375 (37%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFMALVTVLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+ E++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALGEAVAGKEVNFVKMMNDKAKELGLKNYKFVNSTGLTNKDLKGQHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD+AIL+  +  D+P+ +   +I     +          N NW     
Sbjct: 192 GTTPDEENKMSARDVAILAQHLIKDYPKTLDTAKIPKKVFQEGGKYPINMDNWNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           V  + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N
Sbjct: 252 VKQYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESH 319
              ++          Q+ +  E            + V     +      + +  +  +  
Sbjct: 312 FEMKQMYKKDSSVKGQETVRVENAKDKDVAVQTKQVVSLPVPKGSKDVYKTEFKEASKGQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   L   + 
Sbjct: 372 EAPIKKGVALGQMVI 386


>gi|251780585|ref|ZP_04823505.1| penicillin-binding protein DacF [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243084900|gb|EES50790.1| penicillin-binding protein DacF [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 396

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 83/352 (23%), Positives = 148/352 (42%), Gaps = 23/352 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           +++ +    + +L+ I   +             +     +     L++  TG V+ E  P
Sbjct: 5   IKRIISFTLIFVLTIILMPIGAVNASMLEDQVKAEGMNVEAKSALLIEPTTGKVVYEKNP 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  + PAS+TK+MT  +    +   K  L   +T S+NA +   S      G   +++  
Sbjct: 65  DEKFAPASVTKIMTMLLTMEAVDNGKIKLDDKVTCSENAKKMGGSTMLLDTGEIRSVEEL 124

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK + + S ND AVA+AE L  TE  FV  MN  ++ LG+  T F N +G+   GH +TA
Sbjct: 125 LKGVAIASGNDAAVALAEYLGGTESDFVGLMNKRAQELGMKNTVFKNCNGLPADGHLSTA 184

Query: 168 RDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           RD++++S  +            +   I        +  N N  V  F G DG+KTGFT  
Sbjct: 185 RDISLMSIELLKHPTILKYTGTYMDSISEGRKSPIELVNHNKLVRFFEGCDGLKTGFTNE 244

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           + + I A+A +    ++ VI+GA     RN+ +  LL+ GF     +K ++         
Sbjct: 245 AKYCISATATRNGVRMLTVIMGAPTYKIRNRDAGILLNHGFSKYEGKKIVSKDEDVEKVL 304

Query: 284 NLSNE----VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                    +    +++     +  N     K   ++      ++   ++  
Sbjct: 305 MDKQTDRFFMAKAKDDLTAILPKGSNGEISKKIVIEELKPE--YKMGDIVGK 354


>gi|229021621|ref|ZP_04178209.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1272]
 gi|228739667|gb|EEL90075.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1272]
          Length = 428

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 142/367 (38%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAML---SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ IA +ML   SN       A   +     L++ N+G ++ +   D   + AS+TK+M+
Sbjct: 4   VLTIACSMLVPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMS 63

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSAN 117
            Y+V   + + K      + +S+ A       S          + T+    + + + SAN
Sbjct: 64  EYLVNEAVAKGKLKWDQKVKVSEYAYNISQDRSLSNVPLRNGESYTVKELYEAMAIYSAN 123

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
              +A+AE++   E  FV+ MN+ SK  GL    F+N+ G+                  +
Sbjct: 124 GATIALAEAVAGKEVDFVKMMNDKSKEFGLKNYKFVNSTGLTNKDLKGHHPEGTTPDEEN 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQI-----KGLEIKGKKYPNTNWA----VGTFLGAD 214
             +ARD+AIL+ R+  DFP+ +   +I     +       + PN NW     +  + G D
Sbjct: 184 KMSARDVAILAQRLIQDFPKTLDIAKISKKVFREGTPDRIEMPNWNWMLKGLIKEYEGVD 243

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG T  +G     +  +     I+V++       R   +  L   GF N   +K   
Sbjct: 244 GLKTGSTPEAGDCFTGTIERNGMRFISVVIKTNSHTARFDETKKLYDYGFANFEMKKMYE 303

Query: 275 YIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                  ++ +  E            + V     +      + +  +  +      +K  
Sbjct: 304 KGSSVKGKETVRVENAKDKDVAVQTKQAVSLPVPKGSKDVYKTEFKEGNKGQEAPVKKGV 363

Query: 328 LLKNKIT 334
            L   + 
Sbjct: 364 SLGQMVI 370


>gi|294011645|ref|YP_003545105.1| D-alanyl-D-alanine carboxypeptidase [Sphingobium japonicum UT26S]
 gi|292674975|dbj|BAI96493.1| D-alanyl-D-alanine carboxypeptidase [Sphingobium japonicum UT26S]
          Length = 387

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/349 (22%), Positives = 140/349 (40%), Gaps = 20/349 (5%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++    ++ + +LS      +   +++ P   + D ++G V+     D    PAS+ K+
Sbjct: 1   MKKSIAALLFVGLLSTPLTAAAPPYSSEAPIAYMKDLSSGAVLYNKGGDTRIPPASMAKM 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLIVK 114
           MTA+V F  +++    L    T+     +        S      G  ++++N L  ++  
Sbjct: 61  MTAHVAFRLIQKGDLKLEQKFTVRPETWQQWHGPQAGSTMFLSPGEQVSVENLLHGIVTL 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--HYTTARDMAI 172
           S ND  V +AE +  TE+ FV  MN  +K LGL  ++F  ++G    G  + T A   A+
Sbjct: 121 SGNDACVVLAEGIAGTEQAFVALMNQEAKRLGLKNSNFGTSNGWPDEGVTYVTAADLAAL 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKK------YPNTNWAVGTFLGADGMKTGFTCASGF 226
               I+     Y  ++  +                N N  +G   GADG+KTG T  +GF
Sbjct: 181 AEATIEETPNLYKKFYATRSFTWGKTMGGADIEQGNRNPILGKVAGADGLKTGHTQEAGF 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQ 283
               SA Q  + L+ V+ G    N R   S   +  GF     +              Q 
Sbjct: 241 GFTGSAEQEGRRLVMVVAGLTSFNQRIAESVRFMDWGFRAWKAQPLFKKGQTVETAEVQL 300

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +  VP ++ +   V   +    N + ++      ++     ++I  L
Sbjct: 301 GSATSVPLVAPQDMAVTLPRAASSNISVKVAYTGPIKAPIAKGQRIAQL 349


>gi|229100800|ref|ZP_04231618.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-28]
 gi|228682607|gb|EEL36666.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-28]
          Length = 430

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 139/367 (37%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAML---SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ +A +ML   SN       A   +     L++ N+G ++ +   D   + AS+TK+M+
Sbjct: 6   VLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMS 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSAN 117
            Y+V   + + K      I +S+ A +     S          + T+    + + + SAN
Sbjct: 66  EYLVHEAVDKGKLKWDQKIKVSEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSAN 125

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
              +A+ E++   E  FV+ MN+ +K LGL    F+N+ G+                  +
Sbjct: 126 GATIALGEAVAGKEVNFVKMMNDKAKELGLKNYKFVNSTGLTNKDLKGQHPEGTTPDEEN 185

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +ARD+AIL+  +  D+P+ +   +I     +          N NW     V  + G D
Sbjct: 186 KMSARDVAILAQHLIKDYPKTLDTAKIPKKVFQEGGKYPINMDNWNWMLKGLVKQYDGVD 245

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG T  +G     +  +     I+V++       R   +  L   GF N   ++   
Sbjct: 246 GLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYK 305

Query: 275 YIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                  Q+          +      + V     +      + +  +  +      +K  
Sbjct: 306 KDSSVKGQETVRVGNAKDKDVAVQTKQVVSLPVPKGSKDVYKAEFKEASKGQEAPIKKGV 365

Query: 328 LLKNKIT 334
            L   + 
Sbjct: 366 ALGQMVI 372


>gi|218233929|ref|YP_002364864.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           B4264]
 gi|218161886|gb|ACK61878.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           B4264]
          Length = 438

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTVLTLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFGMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EVKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|56697577|ref|YP_167946.1| D-alanyl-D-alanine carboxypeptidase [Ruegeria pomeroyi DSS-3]
 gi|56679314|gb|AAV95980.1| D-alanyl-D-alanine carboxypeptidase [Ruegeria pomeroyi DSS-3]
          Length = 388

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 82/337 (24%), Positives = 143/337 (42%), Gaps = 10/337 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A+ M     P  +           +LD +TG V+     D    PAS++KLMT YV F
Sbjct: 9   LLALGMALTALPGFAY--DTSARAAYVLDQSTGTVLLTKNADEALPPASMSKLMTLYVTF 66

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L++ +  L   + +S++A  Y  S         + +++ L+ +IV S ND    IAE+
Sbjct: 67  EALRDGRLTLDERLPVSQHAMSYGGSTMFLNTTDRVRVEDLLRGIIVLSGNDACAVIAEA 126

Query: 127 LCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           L     E  F + M   ++ +G++ + F N++G    GH  +  D+A+L+ R+ TDFP+Y
Sbjct: 127 LSPDGTEAGFARFMTKRAQQMGMTRSTFANSNGWPAAGHLMSVHDLAVLANRLITDFPEY 186

Query: 185 MHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              F                N N  +   +GADG+KTG T  +G+ +V SA QGD+ +I 
Sbjct: 187 YPLFAETEFAFDGRAPSNVRNRNPLLKLDIGADGLKTGHTAEAGYGLVGSARQGDRRVIF 246

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCT 298
           V+ G      R + + ++++  F +   +                     V  +  E  +
Sbjct: 247 VLTGLESEARRAEEAEAIVNWSFRHFATKTVARADAPVAQAQVWMGAKQSVGLVPAEDLS 306

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +++      E            K   L   + K
Sbjct: 307 LLLPVLSDKRIEAEVVYDGPINAPIAKGQQLAELVIK 343


>gi|228908234|ref|ZP_04072080.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 200]
 gi|228851432|gb|EEM96240.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 200]
          Length = 442

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 135/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 12  KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYQKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALVEEIAGKEGNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLE 191

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFPQ ++  +I     +          N NW     
Sbjct: 192 GTTLDEKNKMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                       + V    + V     +      + +     +  
Sbjct: 312 FEVKNVYGKDSVVKGHETVRVANAKEKDVVVQTKQAVSLPMPKGNKDGYKKEFKVSNKEP 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISKIII 386


>gi|303238725|ref|ZP_07325258.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetivibrio
           cellulolyticus CD2]
 gi|302593844|gb|EFL63559.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetivibrio
           cellulolyticus CD2]
          Length = 399

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 83/328 (25%), Positives = 149/328 (45%), Gaps = 13/328 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +          S     +     ++D  +G V+ E       + AS TK+MTA V     
Sbjct: 36  IFSTEVSNAAGSKTPKIEAGAAIVIDMKSGRVLYEKNAYSTRSIASTTKIMTAIVAIEKG 95

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K     L   + +SK A+    S    K+G  ++L   L  L++ S ND A+AIAE +  
Sbjct: 96  K-----LDNKVKVSKRAASVRGSVIHLKEGEELSLRELLYGLMLNSGNDAAIAIAEHIGG 150

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           + ++F Q MN+ ++ LGL  T F   HG+   GHY+TA ++A ++     +   +     
Sbjct: 151 SVEEFAQMMNDKARELGLKNTQFKTPHGLDTPGHYSTAYELAQIARYALGN-STFSQIVG 209

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +   I G+    TN  +G + GADG+KTG+T  +G  +VASA + +  +I+V+L    R
Sbjct: 210 TQSTSITGRSLYTTNEMLGAYPGADGVKTGYTGQAGRCLVASATRNNMRIISVVLNCHSR 269

Query: 250 NTRNKVSASLLSMGFYNKTDRKKIN------YIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           + R + S ++L   F N    K ++       +     +  +   +P    EV  T++E 
Sbjct: 270 SVRAQSSKAILDYAFNNYKLYKLLDSEENVGKLPVVKGKGEIVPIIPVEGLEVALTEEEK 329

Query: 304 INYNTQMKEAKDKE-SHFIDFEKITLLK 330
            +   ++    +K  +      ++  ++
Sbjct: 330 NSLKEELYLYNNKLMAPVHPNVEVGYIR 357


>gi|260773274|ref|ZP_05882190.1| D-alanyl-D-alanine carboxypeptidase [Vibrio metschnikovii CIP
           69.14]
 gi|260612413|gb|EEX37616.1| D-alanyl-D-alanine carboxypeptidase [Vibrio metschnikovii CIP
           69.14]
          Length = 347

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 9/310 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS- 92
           +D ++G ++AE   +   +PASLTK+MT+YV+   L      L   + IS+NA       
Sbjct: 1   MDYHSGKILAEKEMNTKLSPASLTKMMTSYVIGQELNRGNISLDDDVVISENAWAKNYPD 60

Query: 93  --NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                 + G+++ + +  K +I++S ND  VA+AE +  +E  FV  MN  + +L ++ T
Sbjct: 61  SSKMFIEVGTSVKVRDLNKGIIIQSGNDACVAMAEHVAGSEDAFVDLMNAWASSLNMTNT 120

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGT 209
           HF N HG+     Y+T  DMA+L   +  D P     +  +     G    N N      
Sbjct: 121 HFANVHGLDHPELYSTPYDMALLGQALIRDVPDEYALYAEQKFTYNGITQYNRNGLLWDK 180

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
            +  DG+KTG T  +G+++V+SA +G+  LIAV++G  D N+R   S  LLS GF     
Sbjct: 181 SMNVDGIKTGHTTNAGYSLVSSATEGNMRLIAVVMGTKDINSRKTESKKLLSYGFRFFET 240

Query: 270 RKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                       +  +  +       + ++   T       +       +KE       K
Sbjct: 241 VAPHKAGETFVNETIWMGDKPTVALGVKQDTYVTLPRGQTKDLTASFVLEKE-LKAPINK 299

Query: 326 ITLLKNKITK 335
             ++     +
Sbjct: 300 GDVVGTLYYQ 309


>gi|229027860|ref|ZP_04184018.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1271]
 gi|228733452|gb|EEL84276.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1271]
          Length = 443

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 145/374 (38%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALLTMLTLACSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G T T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVAKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGTYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+ E++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALGEAIAGKEVDFVKMMNDKAKELGLKNYKFVNSTGLTNKDLKGMHPA 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW      
Sbjct: 192 GTTPDEENKMSAKDVATLAQHLLKDYPKVLDTAKIPNKEFRPEKEKFQMLNWNWMLKGLS 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++    R  R   +  L   GF N 
Sbjct: 252 KAYDGVDGLKTGSTPEAGECFTGTVERNGMRFISVVIKTNSRQARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + V     +      + +  +  +   
Sbjct: 312 EMKQLYKKDSSVKGQETVRVENAKDKDVAVQTKQAVSLPVPKGSKNVYKTELKEASKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|319781232|ref|YP_004140708.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317167120|gb|ADV10658.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 387

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 114/332 (34%), Positives = 176/332 (53%), Gaps = 8/332 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R FL + +   +        +A         + D  +G ++        W PASL+KLMT
Sbjct: 4   RHFLKLFSAGTI----ALSVVAGPALANPVVVFDLGSGKILQHQDAFKRWYPASLSKLMT 59

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AYV F  +   +  L +PI ++K+++  PPS   FK GS M LDNALK+++VKSANDIA+
Sbjct: 60  AYVTFRAIAAGEVQLDSPIKVTKHSAAEPPSKMGFKPGSVMRLDNALKMMLVKSANDIAM 119

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+ E++  ++  F   MN  +  LG++ THF+N +G+     YTTARD+A+L   I+ +F
Sbjct: 120 AVGENVGGSQAAFADRMNAEATRLGMNGTHFVNPNGLYSPDQYTTARDLAVLVMAIRREF 179

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           PQY+ +F I+GL +  K  PN N  +G + GADGMKTGF C SGFN++ SA +  ++L+A
Sbjct: 180 PQYVPWFSIEGLAVGKKAIPNYNLLIGRYPGADGMKTGFVCPSGFNMIGSATRNGRTLVA 239

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V+LG     TR + +A LL  GF         +  +        +    ++ +EVC  + 
Sbjct: 240 VVLGEKSAVTRAETAAKLLDQGFD---TPVAGSATVTTLAPYGDTVSPNDMQDEVCKKKT 296

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                      AK+        EK+  +   +
Sbjct: 297 PQEQSEAPPAAAKNVPKSPYQ-EKLDHVPTLV 327


>gi|266624787|ref|ZP_06117722.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288863335|gb|EFC95633.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 410

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 87/323 (26%), Positives = 142/323 (43%), Gaps = 14/323 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            + + P   L++ +TG VI E   D   +PAS+TK+MT  ++F  L   K  +T  +  S
Sbjct: 50  PSIQAPSALLMEASTGQVIYEKDADTKRSPASITKIMTLILIFDALDSGKIKMTDEVVTS 109

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +A     S    ++G T T++  +K ++V S ND +VA+AE +  TE++FV+ MN  + 
Sbjct: 110 AHAKSMGGSQVFLEEGETQTVETMIKCIVVASGNDASVAMAEYIAGTEEEFVKMMNERAA 169

Query: 144 NLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--- 199
            LG++ THF +  G+     H TTARD+A++S  +   +PQ  +Y  I    I       
Sbjct: 170 GLGMTNTHFEDCCGLTESPDHVTTARDIALMSRELINKYPQIHNYSTIWMENITHVTKQG 229

Query: 200 -----YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                  NTN    + T     G+KTG T  + + + A+A +    LIA I+ A D   R
Sbjct: 230 TKEFGLSNTNKLLKMATNFQVTGLKTGSTSLAKYCLSATAEKDGVRLIASIMAAPDYKAR 289

Query: 253 NKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
              + +LL+ G+ N     D++ +             +                 +    
Sbjct: 290 FADAQTLLNYGYANCRLYEDKEMLPLPELAVDNGVTDSVPLKYGGTFSYLSLNGEDLAAI 349

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
            KE    ES     E+       
Sbjct: 350 EKELVLPESIAAPVEEGQSAGVI 372


>gi|229113688|ref|ZP_04243125.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-3]
 gi|228669754|gb|EEL25159.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-3]
          Length = 425

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 140/367 (38%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAML---SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ +A +ML   SN       A   +     L++ N+G ++ +   D   + AS+TK+M+
Sbjct: 1   MLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMS 60

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSAN 117
            Y+V   + + K      I +S+ A +     S          + T+    + + + SAN
Sbjct: 61  EYLVHEAVDKGKLKWDQKIKVSEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
              +A+ E++   E  FV+ MN+ +K LGL    F+N+ G+                  +
Sbjct: 121 GATIALGEAVAGKEVNFVKMMNDKAKELGLKNYKFVNSTGLTNKDLKGQHPEGTTPDEEN 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +ARD+AIL+  +  D+P+ +   +I     +          N NW     V  + G D
Sbjct: 181 KMSARDVAILAQHLIKDYPKTLDTAKIPKKVFQEGGKYPINMDNWNWMLKGLVKQYDGVD 240

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG T  +G     +  +     I+V++       R   +  L   GF N   ++   
Sbjct: 241 GLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYK 300

Query: 275 YIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                  Q+ +  E            + V     +      + +  +  +      +K  
Sbjct: 301 KDSSVKGQETVRVENAKDKDVAVQTKQVVSLPVPKGSKDVYKTEFKEASKGQEAPIKKGV 360

Query: 328 LLKNKIT 334
            L   + 
Sbjct: 361 ALGQMVI 367


>gi|288549826|ref|ZP_05968319.2| D-alanyl-D-alanine carboxypeptidase DacA [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317555|gb|EFC56493.1| D-alanyl-D-alanine carboxypeptidase DacA [Enterobacter cancerogenus
           ATCC 35316]
          Length = 347

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 84/310 (27%), Positives = 134/310 (43%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKGNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K G  +T+ +  + LIV S ND  VA+A+ +   + +FV  MN+  + L L
Sbjct: 61  FDGSSLMFLKPGDRVTVRDLSRGLIVDSGNDACVALADHVAGGQPQFVNMMNDYVQKLNL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 RDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R   +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSPKGREDQARKLLHWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
               + ++   K      +  +         ++      +    N + K   DK+     
Sbjct: 241 FDTVQILHNGKKVGTERIWYGDKEQVELGTDQDFWLALPKTEVPNIKAKYVLDKKELEAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 LAAHQRVGEI 310


>gi|228912752|ref|ZP_04076401.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228846879|gb|EEM91882.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 443

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|28211671|ref|NP_782615.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
 gi|28204113|gb|AAO36552.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
          Length = 419

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 24/347 (6%)

Query: 1   MRQFLVIIAMAMLS-------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+++++   +  LS        I    S   +       L+D  TG V+ E   + P+ P
Sbjct: 8   MKKYILTFLIFFLSFVCINSATINAKTSKPPSVSADGAILMDAKTGKVLYEKNINKPYPP 67

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MTA +           L   + + K       S     +G  + + + L  L++
Sbjct: 68  ASTTKIMTALLTLENC-----NLDDEVVVGKKPPLADGSKIFIHEGEKLKVKDLLYALLL 122

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +SAND A A+AE +  +   F + MN  +K LG + T+F+N +G+    H TTA+D+A++
Sbjct: 123 ESANDAAEALAEHIGGSINDFSKLMNKRAKELGCTNTNFVNPNGLYNAKHRTTAQDLALI 182

Query: 174 SWR--IKTDFPQYMHYFQIKGLEIKGKK----YPNTNW-----AVGTFLGADGMKTGFTC 222
                   D+ +  +    K       K      N N      +   F G +G KTG+T 
Sbjct: 183 MKEVSQYEDYRKISNTITYKIKPTNKSKKERPLWNKNKLVQQNSKYYFKGCNGGKTGYTT 242

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            S  + V SA +GD  LI V++    + T  + S +LL+ GF N    K  +        
Sbjct: 243 QSQHSYVVSANRGDFQLIVVLIH-DSKKTFFEDSVNLLNYGFNNFELIKMYSRGDIVTAY 301

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                 +  I+ +     KE  + +T +   + K  + I F K   +
Sbjct: 302 NEKDLSLNLIARDDFYYIKEKNDPSTAILNLEKKNLNSISFHKGDTI 348


>gi|228918964|ref|ZP_04082345.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228840679|gb|EEM85939.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 443

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTVLTLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EVKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|49478184|ref|YP_034369.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329740|gb|AAT60386.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 438

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|206972675|ref|ZP_03233615.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           AH1134]
 gi|206732395|gb|EDZ49577.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           AH1134]
          Length = 438

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTVLTLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EVKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|296445856|ref|ZP_06887808.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylosinus
           trichosporium OB3b]
 gi|296256684|gb|EFH03759.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylosinus
           trichosporium OB3b]
          Length = 400

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 82/319 (25%), Positives = 135/319 (42%), Gaps = 11/319 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                 +P+  L+D  T  V+ E   D    PAS  K+MTA +VF  + E +  L    T
Sbjct: 33  EGFQTSVPHAILVDAGTHTVLLEKAADDFVTPASTVKVMTAEIVFHEIAEGRLKLDDEFT 92

Query: 82  ISKNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +S++A     +            S   +++ ++ L++ S ND A+ +AE +  +E+ FV 
Sbjct: 93  VSEHAWRSGGAPAGGSAMFLPVNSRAKVEDLIRGLVIVSGNDAAITLAEGVAGSEEAFVG 152

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  +  LGL+ + F N  G        T R+M  L+  +   +P +  YF  K     
Sbjct: 153 RMNKRASELGLAKSIFGNPWGQAGPDQKVTPREMVQLAAHVIETYPDFYRYFGEKEFTWN 212

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             +  N N  +   LGADG+KTG   +SGF +V SA+Q D+ LI  + GA     R + +
Sbjct: 213 KIRQQNRNPLLTMSLGADGLKTGNIDSSGFGLVGSAVQDDRRLIVAVYGAKTAKERAEEA 272

Query: 257 ASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISE---EVCTTQKEIINYNTQM 310
             LL  GF N  +++                 S  V  +S    +V   +      + ++
Sbjct: 273 RKLLQWGFRNFEEKQLFKAGEPVGTAQVYGGDSGAVAVVSPTDVKVLLQRGVSEKLSGKV 332

Query: 311 KEAKDKESHFIDFEKITLL 329
                  +      K+  L
Sbjct: 333 VYEGPLIAPVAAGAKVAKL 351


>gi|254744208|ref|ZP_05201889.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. Kruger B]
          Length = 438

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GXXADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|94496388|ref|ZP_01302965.1| D-alanyl-D-alanine carboxypeptidase [Sphingomonas sp. SKA58]
 gi|94424134|gb|EAT09158.1| D-alanyl-D-alanine carboxypeptidase [Sphingomonas sp. SKA58]
          Length = 387

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 20/349 (5%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++   +++A  +++      +   T + P   + D ++G V+ +   +    PAS+ K+
Sbjct: 1   MKKSLAMLLAAGLVAQPVIAAAPPYTTEAPIAYMKDLSSGAVLYDKGGETRIPPASMAKM 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLIVK 114
           MTA+V F  +++    L T  T+     +        S      G  ++++N L  ++  
Sbjct: 61  MTAHVAFRLIQKGDLKLDTKFTVRPETWQQWHGPKAGSTMFLSAGEQVSVENLLHGIVTL 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAIL 173
           S ND  V +AE +  TE+ FV  MN   K LGL  +HF  ++G    G  Y TA D+A L
Sbjct: 121 SGNDACVVLAEGIAGTEQAFVALMNEEGKRLGLKNSHFGTSNGWPDEGVTYVTAEDLATL 180

Query: 174 SWRIKTDFPQYMH-YFQIKGLEIKGKK------YPNTNWAVGTFLGADGMKTGFTCASGF 226
           +     + P     ++  K                N N  +G   GADG+KTG T  +G+
Sbjct: 181 AQATIEETPDLYKRFYATKSFTWGQTMGGSAIEQANRNPILGKIAGADGLKTGHTEEAGY 240

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQ 283
               SA Q  + L+ V+ G    N R K S   +  GF     +              Q 
Sbjct: 241 GFTGSAEQDGRRLVMVVAGLNSFNGRIKESVRFMDWGFKAWKAQPLFKKGQTVETAEVQL 300

Query: 284 NLSNEVPNISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +  VP ++ +   V   +    +   ++      ++     ++I  L
Sbjct: 301 GSATSVPLVAPQNLAVTLPRTASADVKVKVVYTGPIKAPIAKGQQIAQL 349


>gi|258515621|ref|YP_003191843.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779326|gb|ACV63220.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 381

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 150/345 (43%), Gaps = 21/345 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++ ++ +A  +LS     ++ A           L+D+ TG V     PD    PASLTK+
Sbjct: 5   KKLILALAAVILSLTNTSIAYAQEPVLSADAAVLMDSATGQVFFAKEPDKRRFPASLTKI 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           MTA V               + ISK A+     S    + G  +TL+N LK  +V SAND
Sbjct: 65  MTALVALEN-----GDPNDVVKISKKAASVSMGSVIDLRAGEEITLENLLKAALVCSAND 119

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             VAIAE +    + F+  MN  + + G   T++ N +G     HYTTA D+A+++ +  
Sbjct: 120 STVAIAEHVGGNVENFLVMMNARALSAGAVNTNYANTNGYTLPNHYTTAYDLALIARQAL 179

Query: 179 TDFPQYM------HYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVAS 231
            +                +G + +  +  NTN  +   F G DG+KTG T  +G  ++AS
Sbjct: 180 RNKQFNRLISIKETTLNWEGNKNRTLEIRNTNRLLREGFPGIDGVKTGSTPRAGDCLIAS 239

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNE 288
           A +  + LIAV+L +   N R   +A++L+ GF      +      +       + +  E
Sbjct: 240 ASRNGRRLIAVVLHS---NNRYTDAANILNYGFKEIKSYQVFKKGEQVVSVPVMEGVLKE 296

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           VP I++            +   K+   K S     +   +L   I
Sbjct: 297 VPLITQSGLQIDITDDKISLLRKKFLFKNSVMAPVKSGQVLGEII 341


>gi|297528386|ref|YP_003669661.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. C56-T3]
 gi|297251638|gb|ADI25084.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. C56-T3]
          Length = 452

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 143/382 (37%), Gaps = 46/382 (12%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFL------SIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           MR+        ++++ +     PF       S     +     L+D  TG ++ E   D 
Sbjct: 1   MRRRKQNWLFWLLSICLCLTFGPFQQTVKAESAPLDIRADAAILVDAQTGRILYEKNIDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS+TK+MT Y++   +K K+       T S          +             ++
Sbjct: 61  VLGIASMTKMMTEYLLLDAIKAKRVKWDQMYTPSDYVYRLSQDRALSNVPLRKDGKYTVR 120

Query: 110 LLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            L    A   A     ++ +    +EK FV+ MN+ +K LGL    F+NA G+       
Sbjct: 121 ELYEAMAIYSANGATVAIAEIIAGSEKNFVKMMNDKAKELGLKDYKFVNATGLSNKDLKG 180

Query: 159 -------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA 206
                      +  +AR MA+L++R+  D P+ +    I     +       K  N NW 
Sbjct: 181 FHPEGTSTNEENVMSARAMAMLAYRLLKDHPEVLKTASIPHKVFREGTKDEIKMDNWNWM 240

Query: 207 ----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVS 256
               V  + G DG+KTG+T  +G     +A +    LI+V++ A        +  R K +
Sbjct: 241 LPGLVYGYEGVDGLKTGYTEFAGNCFTGTAKRNGVRLISVVMNAKDASGKTTKEARFKET 300

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
             L + GF   +         +   ++ L        E    T K +       +E + K
Sbjct: 301 EKLFNYGFNQYSLETLYPKGYQLKGKETLPVVKGKDKEVRVATGKNLDLLVKNGEEKQYK 360

Query: 317 ESHFIDFEKITLLKNKI--TKK 336
             + +D +K+T     +   KK
Sbjct: 361 PVYVLDKKKMTKEGKLVAPLKK 382


>gi|228925267|ref|ZP_04088365.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228931516|ref|ZP_04094424.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|229119676|ref|ZP_04248939.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus 95/8201]
 gi|228663767|gb|EEL19344.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus 95/8201]
 gi|228828134|gb|EEM73860.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228834381|gb|EEM79920.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
          Length = 443

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|15965358|ref|NP_385711.1| putative penicillin-binding precursor (D-alanyl-D-alanine
           carboxypeptidase fraction A) transmembrane protein
           [Sinorhizobium meliloti 1021]
 gi|307312733|ref|ZP_07592364.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
 gi|307317217|ref|ZP_07596658.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|15074538|emb|CAC46184.1| Putative penicillin-binding precursor (D-alanyl-D-alanine
           carboxypeptidase fraction A) transmembrane protein
           [Sinorhizobium meliloti 1021]
 gi|306897305|gb|EFN28050.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|306899458|gb|EFN30090.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
          Length = 384

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/342 (21%), Positives = 131/342 (38%), Gaps = 12/342 (3%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+   V+    A++S      + A   K     L+D  TG V+     D P  PASL KL
Sbjct: 3   MKWLAVVGFLAAVVSGQAVAQTPAFDTKAKQIYLVDAETGTVLFSRDEDAPVPPASLAKL 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVK 114
           M   VVF  L + +    T   +S++A          S       S + + + ++   V+
Sbjct: 63  MAMEVVFEALDKGELTPETSFEVSEHAWRTGGAPSGTSTMFAAIKSRIRVADLIQGATVQ 122

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
            AND  + +AE +  +E  F + M   +++LGL    F NA G+    +  T R++  L+
Sbjct: 123 LANDACIVLAEGMAGSEAAFAELMTKRARDLGLPVATFKNATGLPHPENKVTMRELVALT 182

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +    P Y   +     E       N N  +   +G DG+ TGF    GF++  S  +
Sbjct: 183 RHLYEAHPDYYRLYSQPEFEWNKILQRNKNPLIAANVGVDGLATGFAEGFGFSLAVSMQR 242

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPN 291
           GD+ +   + G      R + S  +L         R+         +        + V  
Sbjct: 243 GDRRVYLAMGGLESEKERIEESRRVLDWAMTAFEKRRIFADGETIGEASVYGGADSRVAL 302

Query: 292 IS---EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           ++    +V    K       ++       +     +++ ++K
Sbjct: 303 VAGSPVDVLLPVKNPERLTARIVYKWPLNAPVAAGQQVGVVK 344


>gi|218897430|ref|YP_002445841.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9842]
 gi|218545638|gb|ACK98032.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9842]
          Length = 437

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 7   KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYQKNADESLAI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 127 AMAIYSANGATIALVEEIAGKEGNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLE 186

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFPQ ++  +I     +          N NW     
Sbjct: 187 GTTLDEKNKMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 247 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 306

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                       + V    + V    ++      + +     +  
Sbjct: 307 FEVKNVYGKDSVVKGHETVRVANAKEKDVVVQTKQAVSLPMRKGNKDGYKKEFKVSNKEP 366

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 367 EAPIKKGVTISKIII 381


>gi|319655038|ref|ZP_08009108.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus sp. 2_A_57_CT2]
 gi|317393262|gb|EFV74030.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus sp. 2_A_57_CT2]
          Length = 451

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/391 (17%), Positives = 133/391 (34%), Gaps = 56/391 (14%)

Query: 1   MRQFLV------IIAMAMLSNIFPFLSIAET-----NKLPYYTLLDTNTGHVIAENYPDH 49
           M++          +A+ M+  + P +  A              L+D  TG ++ +   D 
Sbjct: 1   MKKTFYRKSIAGFLALVMILGLLPGIHKAHAEDILNINADAAILVDAETGKILYQKNADK 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS+TK+MT Y++   ++E K        +S+   +     +             ++
Sbjct: 61  VLGIASMTKMMTEYLLLEAVEEGKVKWDQEYAVSEYVWKVSQDRNLSNVPLRRDGKYNIR 120

Query: 110 LLIVKSANDIAVAIAESLCKTEK----KFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            L    A   A     ++ +T       FV+ MN  +  LGL    F+N+ G+       
Sbjct: 121 ELYEAMAIYSANGATIAIAETIAGSETNFVKMMNEKAAELGLKDYKFVNSSGLNNRDLKG 180

Query: 159 ------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA- 206
                  +  +  +A+D A+L+  +   FP+ +          +       K  N NW  
Sbjct: 181 SPPAGGPEEENVMSAKDTAMLAKELINRFPEVLETASTPRKTFREGTDDEIKMENWNWML 240

Query: 207 ---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVSA 257
              V  + GADG+KTG T  +G+    +A++     I+V++ A          +R   + 
Sbjct: 241 PELVYGYEGADGLKTGTTDFAGYCFTGTAMRDGNRYISVVMNAKGANGQATYKSRFDETK 300

Query: 258 SLLSMGFYNKTDRKKINYI-------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            +   GF N T  + +               +        +  + +    +     N + 
Sbjct: 301 KMFDFGFSNFTKEEIVPANYQVKGQKTVPVTKGKEDKVKISSKDAIEMVVRNGEKENYKP 360

Query: 311 KEAKDKES------HFIDFEKITLLKNKITK 335
               DKE            +K   +     +
Sbjct: 361 VLVLDKEKLNENGELTAPIKKGEKIGYLTIE 391


>gi|49183048|ref|YP_026300.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Sterne]
 gi|165873233|ref|ZP_02217844.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0488]
 gi|167635043|ref|ZP_02393360.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0442]
 gi|167641737|ref|ZP_02399980.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0193]
 gi|170688916|ref|ZP_02880118.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0465]
 gi|170707518|ref|ZP_02897971.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0389]
 gi|177655678|ref|ZP_02937003.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0174]
 gi|190569327|ref|ZP_03022219.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           Tsiankovskii-I]
 gi|196036362|ref|ZP_03103759.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus W]
 gi|218901215|ref|YP_002449049.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           AH820]
 gi|227812687|ref|YP_002812696.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. CDC 684]
 gi|254686602|ref|ZP_05150461.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. CNEVA-9066]
 gi|254724155|ref|ZP_05185940.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A1055]
 gi|254737010|ref|ZP_05194715.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. Western North America USA6153]
 gi|254755970|ref|ZP_05208002.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. Vollum]
 gi|254761669|ref|ZP_05213687.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. Australia 94]
 gi|49176975|gb|AAT52351.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Sterne]
 gi|164711031|gb|EDR16597.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0488]
 gi|167510291|gb|EDR85694.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0193]
 gi|167529517|gb|EDR92267.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0442]
 gi|170127514|gb|EDS96388.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0389]
 gi|170667140|gb|EDT17901.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0465]
 gi|172080018|gb|EDT65118.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0174]
 gi|190559549|gb|EDV13542.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           Tsiankovskii-I]
 gi|195990992|gb|EDX54963.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus W]
 gi|218539949|gb|ACK92347.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           AH820]
 gi|227002528|gb|ACP12271.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. CDC 684]
          Length = 438

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|126652926|ref|ZP_01725068.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus sp. B14905]
 gi|126590256|gb|EAZ84378.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus sp. B14905]
          Length = 439

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 131/367 (35%), Gaps = 43/367 (11%)

Query: 13  LSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +    P  + AET     +    L+D ++G ++ E   D     AS+TK+MT Y++   +
Sbjct: 17  IFAGIPAKANAETDLGLTVDAAILIDADSGKILYEQNADTSLGIASMTKMMTEYLLLDAI 76

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                       ++        + +             ++ L    A   A A   ++ +
Sbjct: 77  DAGTVKWDQEYHVTDYTYRMSQNRALSNVPLRRDGSYTIRELYEAMAIYSANAATVAIAE 136

Query: 130 TEKK----FVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMA 171
           T       F++ MN  ++ LGL    F+N+ G+               +  +   A+ +A
Sbjct: 137 TIAGTETEFLKLMNKKAEELGLEGYKFVNSTGLNNADLFGMQPAGTGPEDENVMPAKYVA 196

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTC 222
            L++ +  D P+ +   QI     +          N N+     V  + G DG+KTG T 
Sbjct: 197 KLAYHLLKDHPKVLETSQITKKTFREGTEDAIEMSNWNFMLPGLVFEYQGVDGLKTGTTN 256

Query: 223 ASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
            +G     +A +    LIAV++      G      R   +A L + GF   + ++ +   
Sbjct: 257 FAGHCFTGTAERNGTRLIAVVMKAVDASGQGSYKARFDATAKLFNYGFSQFSKQEILPAN 316

Query: 277 -------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                       +         + E +    K       + K   DK+S     +K T++
Sbjct: 317 YTFKDQKTVKVTKGKEDKVEIAVKEPISFMIKSSDKDLYKPKLVLDKKSLEAGVKKDTVV 376

Query: 330 KNKITKK 336
              + ++
Sbjct: 377 GKVVIER 383


>gi|196041942|ref|ZP_03109229.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           NVH0597-99]
 gi|196027197|gb|EDX65817.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           NVH0597-99]
          Length = 438

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|302382572|ref|YP_003818395.1| serine-type D-Ala-D-Ala carboxypeptidase [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193200|gb|ADL00772.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 514

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 90/236 (38%), Positives = 138/236 (58%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  TG V+   + D    PAS+TK+MT Y+VF  L++    L   IT+S  A+  
Sbjct: 44  AAIVVDAGTGEVLFARHADSQRYPASVTKMMTLYLVFEALEKGTVHLDDVITVSPLAASQ 103

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
           PPS      G T+ LD+A++   V+SAND+A+ +AE +  ++ +F       ++ LG+  
Sbjct: 104 PPSKLGLAAGQTIRLDDAMRATTVRSANDMAMVLAEHIGGSQARFAALATLKAQELGMGQ 163

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T ++N +G+      T+ARD+AILS  I  D+PQY  YF I     +G++Y NTN  +  
Sbjct: 164 TRYVNPNGLPDSRQLTSARDLAILSRAIMRDYPQYYSYFGIHDWTYQGREYRNTNGLLLG 223

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
             G DG+KTGFT ASG+N+ ASA++G + +I ++LG     TRN   A+L+  GF 
Sbjct: 224 GNGYDGIKTGFTNASGYNLAASAVRGGKRVITIVLGGRSSITRNAHVAALMDTGFE 279


>gi|126739769|ref|ZP_01755460.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. SK209-2-6]
 gi|126719001|gb|EBA15712.1| D-alanyl-D-alanine carboxypeptidase [Roseobacter sp. SK209-2-6]
          Length = 388

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 8/343 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR   V  A      +      A         ++D  T  V+     D P  PAS++KLM
Sbjct: 1   MRPVFVTSAFVASLGLSALPLAAFETGARAAYVIDQGTDTVLLSKNADQPLPPASMSKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ +  L+  + +S +A  Y  S         + +++ L+ +IV S ND  
Sbjct: 61  TLYIAFEALQDGRLTLSEKLPVSAHAMSYGGSTMFLDTTDRVGVEDLLRGIIVLSGNDAC 120

Query: 121 VAIAESLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             IAE+L     E  F ++M   ++ LG+    F N++G    GH  + RD+ IL+ R+ 
Sbjct: 121 AVIAEALSPDGTEAGFARYMTRRAQELGMVNATFANSNGWPAAGHRMSMRDLGILAERLI 180

Query: 179 TDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            DFPQY   F  K             N N  +G  +GADG+KTG T  +G+ +V SA+QG
Sbjct: 181 EDFPQYYPLFSEKEFAFDGRAPSNTRNRNPLLGLGIGADGLKTGHTSEAGYGLVGSAVQG 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNI 292
           ++ +I VI G      R + + ++++  F     +      I        +     V  +
Sbjct: 241 ERRVIFVITGLNSAKARAEEAEAVVNWSFRQFAKKTIAKAGIPVAQAEIWRGAQQSVGLV 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                      ++      E   K        K   L   + +
Sbjct: 301 PANDFEVLLPALSGKQVAAEVVYKGPVNAPVSKGQRLAELVLR 343


>gi|52145200|ref|YP_081628.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus cereus E33L]
 gi|51978669|gb|AAU20219.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus cereus E33L]
          Length = 435

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 4   KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 64  ASMTKMMSEYLVHDAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 124 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 183

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 184 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 243

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 244 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 303

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 304 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 363

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 364 APIKKGAALGQMVI 377


>gi|262366391|gb|ACY62948.1| penicillin-binding protein 5 [Yersinia pestis D182038]
          Length = 335

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 86/272 (31%), Positives = 128/272 (47%), Gaps = 7/272 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N+   +          Y L+D N+G V+AE   D   NPASLTK+MT+YV+   +K  K
Sbjct: 54  VNLKTMIPGVPQIDAEAYILIDYNSGKVLAEMNADTRRNPASLTKMMTSYVIGQAIKSGK 113

Query: 74  AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                 +T+ K+A                K G  + +    + + ++S ND  VA+A+ +
Sbjct: 114 IGAEDMVTVGKDAWATGNPEFKGSSLMFLKPGDRVPVSKLTRGINLQSGNDACVAMADYV 173

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             ++  FV  MNN  K LGL  THF   HG+   G +++ARDMA++   +  D P     
Sbjct: 174 AGSQDSFVNLMNNYVKALGLQNTHFKTVHGLDAEGQFSSARDMALIGQALIRDVPDEYAI 233

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++ K       +  N N     T L  DG+KTG T A+G+N+VASA  G   LI+V+LG 
Sbjct: 234 YKEKEFTFNNIRQTNRNGLLWDTSLNVDGIKTGHTEAAGYNLVASATDGQMRLISVVLGG 293

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
                R   S  LL+ GF        +    +
Sbjct: 294 HTFKGRETESKKLLTWGFRFFETVAPLKVGKE 325


>gi|228901076|ref|ZP_04065285.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 4222]
 gi|228858592|gb|EEN03043.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 4222]
          Length = 442

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 12  KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYQKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALVEEIAGKEGNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLE 191

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ ++  +I     +          N NW     
Sbjct: 192 GTTLDEKNKMSARDCAILAQRLIQDFPKILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                       + V    + V    ++      + +     +  
Sbjct: 312 FEVKNVYGKDSVVKGHETVRVANAKEKDVVVQTKQAVSLPMRKGNKDGYKKEFKVSNKEP 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISKIII 386


>gi|319783486|ref|YP_004142962.1| serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317169374|gb|ADV12912.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 434

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 76/329 (23%), Positives = 133/329 (40%), Gaps = 11/329 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            P  +     K     ++D  TG V+     D P  PAS+ KLMT  VVF+ +K  +  L
Sbjct: 69  APAGAQLFETKAAQAFMIDAETGTVLFSKEADKPIPPASMAKLMTMEVVFNAIKSGRLKL 128

Query: 77  TTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
                +S+NA          S    K  S++ L++ ++ + V++AND  + IAE +  +E
Sbjct: 129 DDTFVVSENAWRKGGAPSGTSTMFAKLKSSIRLEDLIQGVTVQAANDGCIVIAEGMSGSE 188

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F   M   ++ +GL  + F+N+ G+   G  TT R++A L+  +  D+P +  YF  K
Sbjct: 189 DNFAVQMTERARQIGLKTSTFVNSTGLPADGQQTTVRELAQLALHLWRDYPDFYRYFAQK 248

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     N N  +   +GADG+  G + A+GF IV S       +IA + G      
Sbjct: 249 DFTWNKISQRNRNPLLAMDIGADGLAVGASEAAGFGIVGSLSHNGTRVIAAMSGLASDKE 308

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIIN 305
           R + +  LL  G  +    +           Q        ++       ++         
Sbjct: 309 RAEEARKLLDWGVRSFEKTEIFARDEVVGEAQVFGGAKSGVTLKAKGPIDIFLPITNRDK 368

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              ++       +   + + +  L+  I 
Sbjct: 369 LTARIVYDGPVAAPVEEGQPVGALRVWIG 397


>gi|255524154|ref|ZP_05391114.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|296186612|ref|ZP_06855014.1| putative D-alanyl-D-alanine carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|255512139|gb|EET88419.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|296048649|gb|EFG88081.1| putative D-alanyl-D-alanine carboxypeptidase [Clostridium
           carboxidivorans P7]
          Length = 398

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 82/325 (25%), Positives = 142/325 (43%), Gaps = 14/325 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++ + G +I E        PAS+TK+MT  +    +   K  L+  +TIS+
Sbjct: 44  KVDAKSALLMEPSNGKIIYEKNCHEKLAPASVTKVMTMLLTMENVDSGKIKLSDKVTISE 103

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA +   S+     G   T++  +K + + S ND AVA+AE L  +E+ FV+ MN  +  
Sbjct: 104 NAKKMGGSSMLLDTGEVRTVEELIKGIGIASGNDAAVAMAEYLGGSEEGFVKLMNERAHK 163

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKY 200
           LG+  T+F N  G+   GH TTA D+AI+S  +            +   I          
Sbjct: 164 LGMKDTNFNNCTGLSSPGHVTTAYDIAIMSRELLKHPDILKYTGTYMETISEGRKSPIGL 223

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  V  F G DG+KTGFT  + + I A+A +    ++AVI+G+     RNK ++ L+
Sbjct: 224 VNHNKLVRFFKGCDGLKTGFTDEAKYCISATATRDGVRMLAVIMGSPTYKVRNKDASMLM 283

Query: 261 SMGFYNKTDRKKINYIIKDFYQ----QNLSNEVPNISEEVCTTQKEIINYNT------QM 310
           + GF    ++K I             +     +    ++     +   +           
Sbjct: 284 NYGFSKYENKKLIEKGKDVEKVNLNRKGDRFFIAKAQDDFSVVLERGKDAKVSKKVVIDK 343

Query: 311 KEAKDKESHFIDFEKITLLKNKITK 335
            + + K + F+ + ++ +    + K
Sbjct: 344 DKKEYKSNEFVGYCEVYVEGKIVGK 368


>gi|84500362|ref|ZP_00998611.1| D-alanyl-D-alanine carboxypeptidase family protein [Oceanicola
           batsensis HTCC2597]
 gi|84391315|gb|EAQ03647.1| D-alanyl-D-alanine carboxypeptidase family protein [Oceanicola
           batsensis HTCC2597]
          Length = 477

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 1/258 (0%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +  +                ++D  +G V+  +  D   +PASLTK+MT Y+ F  ++  
Sbjct: 1   MVFVANPAMREAQAAPYAAMVMDARSGEVLHSSNADARLHPASLTKMMTLYIAFEAVRNG 60

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L TP+ IS+NA+  PPS      GS + L   ++   VKSAND A AI E++  +E 
Sbjct: 61  EITLDTPVRISRNAAAEPPSKLGLAAGSKIKLRYLIRASAVKSANDAATAIGEAIEGSEA 120

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           +F + M  T+K LG++ T F NAHG+ + GH +TARDM IL   +  D+P+Y + F    
Sbjct: 121 RFARRMTRTAKALGMTRTTFKNAHGLTESGHLSTARDMTILGRHLLFDYPEYYNLFSRVQ 180

Query: 193 LEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                KK  NTN   +G++ GADG+KTG+T A+GFN+VASA +G++ +IA + G     +
Sbjct: 181 THAGIKKVSNTNRRLLGSYRGADGIKTGYTRAAGFNLVASAERGNERIIATVFGGRSSAS 240

Query: 252 RNKVSASLLSMGFYNKTD 269
           RN   A LL +GF     
Sbjct: 241 RNAKVAELLDLGFKRAPS 258


>gi|83945500|ref|ZP_00957847.1| D-alanyl-D-alanine carboxypeptidase [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851076|gb|EAP88934.1| D-alanyl-D-alanine carboxypeptidase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 418

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 91/265 (34%), Positives = 141/265 (53%), Gaps = 2/265 (0%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M ++++ +   +        + A         + D  TG V+     D    PASLTK+M
Sbjct: 1   MSRYILALLCVLSVFALTSRAEASERYA--AFVADMETGEVLHSRRADAERYPASLTKMM 58

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  L+  +  L   IT S  A+  P S    + G T+ +++A++ LI++SAND+A
Sbjct: 59  TLYMLFEALERGEVSLDDAITASAEAASRPSSKLGLRAGQTIRVEDAIRALIIQSANDVA 118

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE L   E +F   M   ++ LG++ T F NA G+     +TTARD+A L++ +  D
Sbjct: 119 VAVAEHLQDDEARFAAVMTLRARELGMTNTVFRNASGLPDAAQHTTARDVARLAYALHED 178

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY HYF        G  + N N  VG   G DG+KTG+  ASGFN+ ASA +    +I
Sbjct: 179 FPQYYHYFGETRFRWNGVTHRNHNSLVGNQAGVDGLKTGYIRASGFNLAASAERDGHRII 238

Query: 241 AVILGALDRNTRNKVSASLLSMGFY 265
           AV++G +  + R+  +  L+   F 
Sbjct: 239 AVVMGGVSASVRDAHARELIEAAFS 263


>gi|325661128|ref|ZP_08149755.1| hypothetical protein HMPREF0490_00488 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472635|gb|EGC75846.1| hypothetical protein HMPREF0490_00488 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 394

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 96/350 (27%), Positives = 155/350 (44%), Gaps = 31/350 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----------------NKLPYYTLLDTNTGHVIA 43
           MR  L ++ ++++       ++                           L++ +TG +I 
Sbjct: 15  MRTILAVV-LSVILCTGTVCAMPPDGKVLQEEVESEKKNELELTAQSAVLMEASTGKIIY 73

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           E   +    PAS+TK+MT  ++   +++ K  L   +T+S+ A+    S    + G   T
Sbjct: 74  EKQKEEERPPASVTKVMTMLLILDAVEDGKIKLEDEVTVSEYAASMGGSQVFLEPGEVQT 133

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +D  LK + V SAND  VA++E +  +E+ FV+ MN  +K LG+  THF+N +G+   GH
Sbjct: 134 VDTMLKCIAVASANDACVAMSEYISGSEEAFVEQMNARAKGLGMEHTHFVNCNGLDADGH 193

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNWAVGTFLGADG 215
            TTA D+A++S  + T  P+   Y  I    I  K           NTN  V  +  A G
Sbjct: 194 LTTAYDIALMSRELITKHPEIEKYSMIWMENITHKTNKGTSEFGLSNTNKLVRHYPYATG 253

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTG T  + F I A+A +    LIAVI+ A D   R K + +LL+ GF   T      Y
Sbjct: 254 LKTGSTSKAKFCISATARKDGMDLIAVIMAAPDSKMRVKDATTLLNYGFGKCT-----KY 308

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           + K+              E+V    + I  Y         +    +  +K
Sbjct: 309 VDKEKGGLKAVKVDGGTKEKVRIEPEAIFQYVDTTGANLSEIQKKLVLKK 358


>gi|218886223|ref|YP_002435544.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|218757177|gb|ACL08076.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 481

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 99/308 (32%), Positives = 148/308 (48%), Gaps = 5/308 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                S  ET  +    LLD +TG +I E   D P  PASLTK+++ YV    ++  KA 
Sbjct: 67  PVAHASSHETLDVRSAMLLDMSTGRIIYEQNADEPIPPASLTKVLSMYVALDQVRAGKAS 126

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   + +S+ A     S    K+G T+TLD+ L+ + V S ND +VA AE +      FV
Sbjct: 127 LKDTVKVSRRAFSTGGSRMFLKQGETLTLDDLLEGMAVSSGNDASVATAEHIGGNVDNFV 186

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           Q MN  ++ LG+  + F N HG+   G +TTARDM  LS      +P+ + Y   + ++ 
Sbjct: 187 QMMNAKARALGMKNSVFRNPHGLPAAGQHTTARDMLALSRAYLAQYPEALRYHSTRYIKH 246

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                 N N  +G   GADG+KTG+  ASG+N++++  +G   L+AV+LGA     R + 
Sbjct: 247 NKVITTNKNPLLGNCEGADGLKTGWVFASGYNLISTVKRGKTRLLAVVLGAETTQARAQE 306

Query: 256 SASLLSMGFYN-----KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
              L+  GF +     K+    +  +    Y  NL         E+  T K      T +
Sbjct: 307 VNRLVEAGFRSVAGGGKSVSTLLADMRPADYALNLHKTNSEAYAELRKTSKATKARKTSV 366

Query: 311 KEAKDKES 318
             AK  E 
Sbjct: 367 AAAKASED 374


>gi|291539061|emb|CBL12172.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis XB6B4]
          Length = 348

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 88/312 (28%), Positives = 146/312 (46%), Gaps = 11/312 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++  TG V+ E  P    +PAS+TK+MT  ++F  L  K+  L   +T+S+ A+    S 
Sbjct: 1   MEAFTGAVVYEKNPHEARHPASVTKIMTLLLIFDALSSKQISLDDTVTVSEYAASIGGSQ 60

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G T T++  +K + V SAND  VA+AE +  +E +FV+ MN  +K LG++ T+F+
Sbjct: 61  VFLEPGETQTVETMIKCISVASANDACVAMAEHVAGSESEFVRMMNERAKGLGMNDTNFV 120

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNW 205
           N  G+   GH T+A D+A++S  + T +P+   Y  I    I              NTN 
Sbjct: 121 NCCGLDADGHMTSANDIALMSRELITKYPKIHDYCTIWMENITHTTAKGSSEFGLTNTNK 180

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +  +  A G+KTGFT  + + I A+A + D  LIAVI+GA D  +R+  + +LL+ GF 
Sbjct: 181 LIKHYQYATGLKTGFTNTAMYCISATAKKDDMELIAVIMGAPDIKSRSADATTLLNYGFG 240

Query: 266 N---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
                 D  +         +    +              +  +     K  +  E+    
Sbjct: 241 KCRIYCDSHEDKLDDLPVKKGLADSVGIIYQRPFQYMTTDGSDLTGITKSIELPENVTAP 300

Query: 323 FEKITLLKNKIT 334
            +K       + 
Sbjct: 301 VKKGNTAGKAVY 312


>gi|153810795|ref|ZP_01963463.1| hypothetical protein RUMOBE_01179 [Ruminococcus obeum ATCC 29174]
 gi|149833191|gb|EDM88273.1| hypothetical protein RUMOBE_01179 [Ruminococcus obeum ATCC 29174]
          Length = 422

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 12/339 (3%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I M  +       +       P   L++  TG  +     D   +PAS+TK+MT  ++F 
Sbjct: 48  ICMISVYAGQENSTSGPELSAPSAVLMEAETGQFVYAKDKDTRRSPASVTKIMTLILIFD 107

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L      LT P+T S +A     S    ++G   T++  +K +++ S ND +VA+AE +
Sbjct: 108 HLHAGDISLTDPVTTSAHAKSMGGSQVFLEEGEIQTVETLIKCIVIASGNDASVAMAEFI 167

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMH 186
             +E++FV  MN  +  LG+  THF++  G+     HYTTA D+AI+S  +   +P+ + 
Sbjct: 168 SGSEQEFVAQMNLRADRLGMKNTHFIDCCGLTDSDEHYTTANDIAIMSRELIVKYPKILD 227

Query: 187 YFQIKGLE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           Y  I            IK     NTN  + T+ G  G+KTG T  +GF + A+A +    
Sbjct: 228 YSSIWMETIIHETSQGIKEFGLTNTNRLIRTYPGCRGLKTGSTSKAGFCLSATAERNSLK 287

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           LI+V++ A D   R K +A+LL  GF       D    +       +    +      + 
Sbjct: 288 LISVVMAAPDYKARLKDAAALLDYGFSRCSIYEDNTPESLPAIPVKRGLHRSAAVQYGKT 347

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                 +     T  K+     S     +K       I 
Sbjct: 348 FRYLSTDGTKITTVNKKYIHPASVNAPVKKGEKAGEIIY 386


>gi|313901924|ref|ZP_07835342.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467819|gb|EFR63315.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 475

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 139/353 (39%), Gaps = 27/353 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSI------------AETNKLPYYTLLDTNTGHVIAENYPDHPW 51
             V + +A+L+   P +                +       L+D  TG V+     D   
Sbjct: 43  LAVALGLAVLAGAVPGVPAARVRAEGSAPQQPPSQDARAAILVDAATGQVLYARNADATM 102

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS TK+MTA +        +  L   IT S+ A     S+     G   TL+  L  L
Sbjct: 103 PMASTTKIMTALLAIE-----RGDLQQVITTSQRAFGVEGSSLYLALGEQRTLEELLYGL 157

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND AVAIAE L  + + FVQ MN  ++ LGL  T F + HG+    HYT+ARD+A
Sbjct: 158 MLQSGNDAAVAIAEGLAGSVETFVQWMNQRARELGLEHTRFADPHGLASRDHYTSARDLA 217

Query: 172 ILSWRIKTDFPQY-----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            L+     +           Y      +   +   N N  +  + GA G+K G+T A+  
Sbjct: 218 TLARVALANPTFRRVVGTREYRMPWPEKNSERVLYNHNRFLWRYDGATGVKNGYTSAARG 277

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQ 283
            +VASA +G   L+ V+LGA       +  A+L+  GF        +    +      + 
Sbjct: 278 ALVASAQRGGVELVGVLLGAH-PTGMYRDMAALMDWGFARFEPLPLVQAGERVGQVPVRG 336

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-SHFIDFEKITLLKNKITK 335
              + V  ++                ++   + E +      +   +   + +
Sbjct: 337 GRQDSVAAVAAYGVRWLVPRDEPAPPVRRQVELEQALQAPVGEGARVGTLVVR 389


>gi|319638282|ref|ZP_07993045.1| D-alanyl-D-alanine carboxypeptidase DacC [Neisseria mucosa C102]
 gi|317400555|gb|EFV81213.1| D-alanyl-D-alanine carboxypeptidase DacC [Neisseria mucosa C102]
          Length = 405

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 83/363 (22%), Positives = 153/363 (42%), Gaps = 32/363 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS--------------------------IAETNKLPYYTLL 34
           M++ L+ +  A L N     +                                   Y + 
Sbjct: 2   MKKTLLSLIFAALLNTHALAADPVASAPAVQGEAQPQPLLHSINSPTTPPEIAATAYIVT 61

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D ++   +A N  D P  PA+LT++MTAY+ F  L+         +T+S  A +   S  
Sbjct: 62  DLHSKQTLASNNADAPIEPAALTQMMTAYLAFKALENGTLEAGQMLTVSNAAWKVEGSRM 121

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFM 153
                  +++ + +K   ++SAND A+ +AE++   +  +FV+ MN  +K LG+  THF 
Sbjct: 122 FLDPKVPVSVSSLIKGTTIQSANDAAITLAEAIGNGSIDEFVKQMNEEAKRLGMKHTHFN 181

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           N  G+  +GH +T  D+AIL+  +  D+P+Y   F  K  +    + PN N  +      
Sbjct: 182 NPTGISSNGHVSTVGDLAILAAALINDYPKYYPLFANKSFKYNNIEQPNRNLLLYRDSSI 241

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTG++  +G+++ AS+ + ++ +++++ GA     R   S+ LL+         K  
Sbjct: 242 DGLKTGYSEGAGYHLAASSKRNNRRIVSILAGAESTEARASESSKLLNWSLQAFDTPKLY 301

Query: 274 NYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           N          Y+ +         ++V  T       N +    +  +      EK  +L
Sbjct: 302 NGGEVISQVKVYKGSTKAVDIGFLDDVYITIPHDTGKNVKP-ILETLQPVLAPIEKGQVL 360

Query: 330 KNK 332
              
Sbjct: 361 GKL 363


>gi|30260203|ref|NP_842580.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. Ames]
 gi|47525265|ref|YP_016614.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|30253524|gb|AAP24066.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. Ames]
 gi|47500413|gb|AAT29089.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. 'Ames Ancestor']
          Length = 435

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 4   KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 64  ASMTKMMSEYLVHEAVDKGKFKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 124 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 183

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 184 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 243

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 244 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 303

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 304 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 363

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 364 APIKKGAALGQMVI 377


>gi|30018287|ref|NP_829918.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29893827|gb|AAP07119.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 438

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 145/374 (38%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTVLTLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LG+     +N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGVKNYKCVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFGMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EVKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|89100964|ref|ZP_01173810.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus sp. NRRL
           B-14911]
 gi|89084335|gb|EAR63490.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus sp. NRRL
           B-14911]
          Length = 433

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 130/363 (35%), Gaps = 45/363 (12%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                A         +++  TG V+     D     AS+TK+MT Y++   +KE K    
Sbjct: 13  ASADDALNINADAAIVVEAETGKVLYSKNADKVLGIASMTKIMTEYLLLEAIKEGKVKWD 72

Query: 78  TPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
               +S+   +     +             +    + + + SAN   +AIAE++  +E  
Sbjct: 73  QEYAVSEYVWKVSQDRALSNVPLRRDGKYNIKELYEAMSIYSANGATIAIAETIAGSESN 132

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHG-------------HYTTARDMAILSWRIKTD 180
           FV+ MN+ ++ LGL    F+N+ G+                 +  +AR  A L+ R+  D
Sbjct: 133 FVKMMNDKAEELGLKDYKFVNSSGLNNRDLKGSHQVGGAEDENVMSARATAKLAQRLLHD 192

Query: 181 FPQYMHYFQIKGLEIK-----GKKYPNTNWAVGT----FLGADGMKTGFTCASGFNIVAS 231
           +P+ +    I     +       K  N NW + +    + G DG+KTG T  +G+    +
Sbjct: 193 YPEILETTSIPTKNFREGTDDEIKMDNWNWMLPSLVFGYEGVDGLKTGTTDFAGYCFTGT 252

Query: 232 AIQGDQSLIAVILGAL------DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------- 278
           A +     I V++ A          +R   +  +L   F N +  + I    +       
Sbjct: 253 ATRDGNRYITVVMNAKGEGNSGSYKSRFDETRKMLDYAFSNFSKEEIIAKNYQVKGQKTL 312

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES------HFIDFEKITLLKNK 332
              +    +      + +    K     + + +   DK+            +K   +   
Sbjct: 313 PVTKGKEDSVKIQAKDAIELVVKNGEKESYKPELVLDKDKLDKDGNLTAPVKKGEKIGYL 372

Query: 333 ITK 335
             K
Sbjct: 373 TLK 375


>gi|241758793|ref|ZP_04756906.1| D-alanyl-D-alanine carboxypeptidase DacC [Neisseria flavescens
           SK114]
 gi|241321001|gb|EER57214.1| D-alanyl-D-alanine carboxypeptidase DacC [Neisseria flavescens
           SK114]
          Length = 405

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 83/363 (22%), Positives = 152/363 (41%), Gaps = 32/363 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS--------------------------IAETNKLPYYTLL 34
           M++ L+ +  A L N     +                                   Y + 
Sbjct: 2   MKKTLLSLIFAALLNTPALAADPVASAPVVQSEAQTQPLLHSINSPTTPPEIAATAYIVT 61

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D ++   +A N  D P  PA+LT++MTAY+ F  L+         +T+S  A +   S  
Sbjct: 62  DLHSKQTLASNNADTPIEPAALTQMMTAYLAFKALENGTLEAGQMLTVSNAAWKVEGSRM 121

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFM 153
                  +++ + +K   ++SAND A+ +AE+    +  +FV+ MN  +K LG+  THF 
Sbjct: 122 FLDPKVPVSVSSLIKGTTIQSANDAAITLAEALGNGSIDEFVKQMNEEAKRLGMKHTHFN 181

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           N  G+  +GH +T  D+AIL+  +  D+P+Y   F  K  +    + PN N  +      
Sbjct: 182 NPTGISSNGHVSTVGDLAILAAALINDYPKYYPLFANKSFKYNNIEQPNRNLLLYRDSSI 241

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTG++  +G+++ AS+ + ++ +++++ GA     R   S+ LL+         K  
Sbjct: 242 DGLKTGYSEGAGYHLAASSKRNNRRIVSILAGAESTEARASESSKLLNWSLQAFDTPKLY 301

Query: 274 NYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           N          Y+ +         ++V  T       N +    +  +      EK  +L
Sbjct: 302 NGGEVISQVKVYKGSTKAVDIGFLDDVYITIPHDTGKNVKP-ILETLQPVLAPIEKGQVL 360

Query: 330 KNK 332
              
Sbjct: 361 GKL 363


>gi|284800030|ref|ZP_05985503.2| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria subflava
           NJ9703]
 gi|284796183|gb|EFC51530.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria subflava
           NJ9703]
          Length = 405

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 83/363 (22%), Positives = 154/363 (42%), Gaps = 32/363 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS--------------------------IAETNKLPYYTLL 34
           M++ L+ +  A L N     +                                   Y + 
Sbjct: 2   MKKTLLSLIFAALLNTHALAADPVASAPAVQGEAQPQPLLHSINSPTTPPEIAATAYIVT 61

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D ++   +A N  D P  PA+LT++MTAY+ F  L+      +  +T+S  A +   S  
Sbjct: 62  DLHSKQTLASNNADAPIEPAALTQMMTAYLAFKALENGTLEASQMLTVSNAAWKVEGSRM 121

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFM 153
                  +++ + +K   ++SAND A+ +AE++   +  +FV+ MN  +K LG+  THF 
Sbjct: 122 FLDPKVPVSVSSLIKGTTIQSANDAAITLAEAIGNGSIDEFVKQMNEEAKRLGMKHTHFN 181

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           N  G+  +GH +T  D+AIL+  +  D+P+Y   F  K  +    + PN N  +      
Sbjct: 182 NPTGISSNGHVSTVGDLAILAAALINDYPKYYPLFANKSFKYNNIEQPNRNLLLYRDSSI 241

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTG++  +G+++ AS+ + ++ +++++ GA     R   S+ LL+         K  
Sbjct: 242 DGLKTGYSEGAGYHLAASSKRNNRRIVSILAGAESTEARASESSKLLNWSLQAFDTPKLY 301

Query: 274 NYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           N          Y+ +         ++V  T       N +    +  +      EK  +L
Sbjct: 302 NGGEVISQVKVYKGSTKAVDIGFLDDVYITIPHDTGKNVKP-ILETLQPVLAPIEKGQVL 360

Query: 330 KNK 332
              
Sbjct: 361 GKL 363


>gi|114799142|ref|YP_759747.1| putative D-alanyl-D-alanine carboxypeptidase [Hyphomonas neptunium
           ATCC 15444]
 gi|114739316|gb|ABI77441.1| putative D-alanyl-D-alanine carboxypeptidase [Hyphomonas neptunium
           ATCC 15444]
          Length = 442

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 142/258 (55%), Gaps = 2/258 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +    S       +A +         ++D ++G V+     D P  PASLTK+MT Y++F
Sbjct: 13  SAIAASVSITAAVMAPSAHAEKYAAIVVDADSGEVLHARNQDDPRYPASLTKVMTLYLLF 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             +      L   I +S+NA+  PPSN   + G T+T+++A+  L  KSAND+A A+AE 
Sbjct: 73  DAIDAGDVSLKDKIKVSRNAAAQPPSNLRLRAGDTITVEDAIYALTTKSANDVAAAVAEF 132

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L  +E+KF   M + +++LGLS T F NA G+      +TARD+AIL+  +  +   Y H
Sbjct: 133 LGGSERKFAAMMTDKARDLGLSNTTFRNASGLPDTAQLSTARDLAILADALLDNHEPYYH 192

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           YFQ +     G  Y + N  +G+  G DG+KTG+T ASGFN++ SA +  + +IA++LG 
Sbjct: 193 YFQNQRFSWGGMTYKSHNNLIGSVDGVDGIKTGYTRASGFNLMTSAERDGRRVIAIVLGG 252

Query: 247 LDRNTRNKVSASLLSMGF 264
               +R+     L+   F
Sbjct: 253 ASAKSRDAHVTELVESAF 270


>gi|75763243|ref|ZP_00743000.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74489272|gb|EAO52731.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 448

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 136/376 (36%), Gaps = 43/376 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 17  KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYQKNADESLAI 76

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 77  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 136

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 137 AMAIYSANGATIALVEEIAGKEGNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLE 196

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVG-- 208
                  +  +ARD AIL+ R+  DFP+ ++  +I     +          N NW +   
Sbjct: 197 GTTLDEKNKMSARDCAILAQRLIQDFPKILNTAKIPKKTFQEGGKYPIDMANFNWMLKXF 256

Query: 209 ---TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF 
Sbjct: 257 XLXQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFA 316

Query: 266 NKTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
           N   +                       + V    + V    ++      + +     + 
Sbjct: 317 NFEVKNVYGKDSVVKGHETVRVANAKEKDVVVQTKQAVSLPMRKGNKDGYKKEFKVSNKE 376

Query: 319 HFIDFEKITLLKNKIT 334
                +K   +   I 
Sbjct: 377 PEAPIKKGVTISKIII 392


>gi|89070235|ref|ZP_01157559.1| D-alanyl-D-alanine carboxypeptidase [Oceanicola granulosus
           HTCC2516]
 gi|89044155|gb|EAR50313.1| D-alanyl-D-alanine carboxypeptidase [Oceanicola granulosus
           HTCC2516]
          Length = 411

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 11/323 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     +     + D  T  ++ E   D P  PAS++KLMT Y+ F  ++  +  L  
Sbjct: 23  AAAQGFDTRANAAYVYDVTTETILLEKNADEPLPPASMSKLMTLYMAFEAIESGRLRLDE 82

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFVQ 136
            + +S++A  Y  S          T+++ L+ +IV S ND +  +AE+L     E  F +
Sbjct: 83  QLPVSEHAMSYGGSTMFLDTTDRPTVEDLLRGVIVLSGNDASAVLAEALSPDGTEAGFAR 142

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            M    + +GL+ + F N++G     H  + RD+ +++ R+  DFP     F  +  E  
Sbjct: 143 LMTERGRQIGLTNSTFANSNGWPAPDHRMSVRDLGVVATRLIEDFPDLYPMFAEQTFEYD 202

Query: 197 ---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N N  +G  +GADG+KTG T  +G+ +V SA+Q D+ ++ V+ G      R 
Sbjct: 203 GRAPTNVRNRNPLLGLGIGADGLKTGHTEEAGYGLVGSAVQEDRRVVFVLAGLDSTAERA 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIIN--YN 307
           + S  +++  F    ++       +    D +    S     ++E+V      +      
Sbjct: 263 EESERVVNWAFRQYVEKGLTEAGTRIAEADVWMGAASTVGLTVAEDVSLLVPVLSQGGVA 322

Query: 308 TQMKEAKDKESHFIDFEKITLLK 330
            ++      E+     ++I  L+
Sbjct: 323 AEVVYTGPVEAPVAAGDEIAELR 345


>gi|163938022|ref|YP_001642906.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163860219|gb|ABY41278.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 435

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 144/374 (38%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 4   KRFIALVTVLTLAFGMFAPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G   T+    +
Sbjct: 64  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKISQDASLSNVALENGGLYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 124 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKAKELGLKNYKFVNSTGLTNKDLKGMHPE 183

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I     + +K      N NW     V
Sbjct: 184 GTTPDEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKVFRPEKEKFGMSNWNWMLKGLV 243

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 244 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 303

Query: 268 TDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             +K          ++          + V    + V     +      + +  +  +   
Sbjct: 304 EMKKMYEKGSSVKGKETVRVENAKDKDVVVQTKQAVSLPVPKGSKDVYKTEFKEGNKGQE 363

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 364 APLKKGVALGQMVV 377


>gi|302389707|ref|YP_003825528.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosediminibacter
           oceani DSM 16646]
 gi|302200335|gb|ADL07905.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosediminibacter
           oceani DSM 16646]
          Length = 377

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 17/334 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+++       +      +  +     Y L+D  +G ++ E   +     AS TK+MTA 
Sbjct: 12  FVILFTSGFFISGSEAKELNLSLNARAYVLMDPVSGRILVEKNSEIRLPMASTTKIMTAI 71

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V           L + +T+S+ A+    S+   + G TM+L++ L  L++ S ND AVAI
Sbjct: 72  VALEK-----GDLNSTVTVSRKAASVRGSSFHLEPGETMSLESMLYGLLLPSGNDAAVAI 126

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +    K FV+ MN  ++ +G   THF N HG+ + GH+TTA+D+A+++     + P+
Sbjct: 127 AEHIGGDVKTFVELMNLKAREIGAFNTHFKNPHGLDEPGHFTTAKDLALITRYAL-NIPK 185

Query: 184 YMHYFQIKGLEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +    + K + I    + +   NTN  +      DG+KTG+T  +G  +VA+A +    L
Sbjct: 186 FREIVRTKDIIITEGRRPRHIYNTNRLLRVSEEIDGVKTGYTGKAGRCLVATAERNGMRL 245

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE 295
           I+V+L A D       +  LL+ GF      K +               ++  V    E+
Sbjct: 246 ISVVLDAHD---HFSNTLKLLNYGFSTYRLNKLVQKNNIYAAVPLKGGIINKAVLIAGED 302

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           V    ++    + ++       +     + +  +
Sbjct: 303 VALPMRDGEKAHLKLVIPSFVPAPVFKDQVVGEI 336


>gi|220926507|ref|YP_002501809.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Methylobacterium nodulans ORS 2060]
 gi|219951114|gb|ACL61506.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Methylobacterium nodulans ORS 2060]
          Length = 490

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 97/271 (35%), Positives = 149/271 (54%), Gaps = 4/271 (1%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D ++G V+       PW PAS+TKLMT YV    +++ +A +   +TIS  A+  PP
Sbjct: 34  LVVDVDSGKVLYSQAATDPWYPASITKLMTTYVALDLVRQGRASMDQLLTISPEAASEPP 93

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   FK G+ +TLDNALK+++VKSAND+A AIAE L  +   F   MN T++ LG+  + 
Sbjct: 94  SKMGFKPGTQITLDNALKIIMVKSANDVAWAIAEGLAGSVDNFAVLMNETAQRLGMRDSR 153

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           ++N +G+     +T+ARDMAIL   +  DFP     F I  ++      PN N  +G + 
Sbjct: 154 WVNPNGLPDPRQWTSARDMAILGRALLRDFPDNRDLFSISAIQFGRAVMPNHNGLLGRYA 213

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           G DGMKTGF CA GFN+VASA +  + +I V++G      R+  +A L   GF   +   
Sbjct: 214 GVDGMKTGFICAGGFNVVASATRNGRRIITVVMGQPTARERDLKAADLFDYGFGQSSWGG 273

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
                +      + +   P++   +C  ++ 
Sbjct: 274 TSLADLPT----SPAAAPPDMRPYICDKRRP 300


>gi|126462962|ref|YP_001044076.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|332558995|ref|ZP_08413317.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           WS8N]
 gi|126104626|gb|ABN77304.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|332276707|gb|EGJ22022.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           WS8N]
          Length = 389

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 138/340 (40%), Gaps = 13/340 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +    +LS +    ++A   +     + D  T  V+ +     P  PAS++KLMT  ++F
Sbjct: 6   LFLALILSLVTALPAMAFDTRARAAWVYDVTTHTVLLDKNAHEPLPPASMSKLMTLNMLF 65

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L++ +  + T   +S  A +   S    ++    T++  +  +IV S ND  V +AE 
Sbjct: 66  EALRDGRVTMETTFAVSTKAKQMGGSKMFVEERDRPTVEELIHGIIVNSGNDACVVVAEG 125

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L  TE  F + M   +K LG++ + F N+ G    GH  +  D+ IL+ R+  +FP++  
Sbjct: 126 LNGTESDFARAMTVRAKALGMTDSTFTNSSGWPDPGHRMSVHDLGILAVRLIEEFPEFYP 185

Query: 187 YFQIKGLEIKGKKYPNTNWA-------VGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
           YF       K +   N N               ADG+KTG T  +G+ +V SA  +  + 
Sbjct: 186 YFSHTEFNYKDRVPSNANNRNPLLRLGPNGDWTADGLKTGHTQEAGYGLVGSAVQKDGRR 245

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           ++ V+ G      R +    +++  F     +  +    +    D +  N S      +E
Sbjct: 246 IVFVLTGLATEADRAQEGEQIVNWAFRQFVQKTLVTKGQRVTEADVWLGNASRVGLVPAE 305

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +V      ++  +    E                L   + 
Sbjct: 306 DVKLLVPALVQ-DNVTAEVSYTGPLRAPIAAGQELAELVI 344


>gi|323484906|ref|ZP_08090261.1| hypothetical protein HMPREF9474_02012 [Clostridium symbiosum
           WAL-14163]
 gi|323693651|ref|ZP_08107850.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14673]
 gi|323401787|gb|EGA94130.1| hypothetical protein HMPREF9474_02012 [Clostridium symbiosum
           WAL-14163]
 gi|323502265|gb|EGB18128.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14673]
          Length = 404

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 85/369 (23%), Positives = 151/369 (40%), Gaps = 34/369 (9%)

Query: 1   MRQFLVIIAMAML--------------------SNIFPFLSIAETNKLPYYTLLDTNTGH 40
           M++   +I   M+                    ++     +     + P   L++ +TG 
Sbjct: 1   MKRLTAVILTIMMVLQTGLYSVYASVPEIPAEAASAMVQAADGPEIQAPDAILIEASTGT 60

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           VI E   D   NPAS+TK+MT  ++F  LK  K  L   +  S +A     S    ++G 
Sbjct: 61  VIYEKNADEARNPASVTKIMTLLLIFDALKSGKIHLDDEVVTSAHAKSMGGSQVFLEEGE 120

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
             T++  +K +++ S ND +VA+AE +   E  FV+ MN  +K LG+   +F +  G+  
Sbjct: 121 IQTVETLIKCIVIASGNDASVAMAEYIGGDEATFVKMMNERAKGLGMENANFEDCCGLTD 180

Query: 161 -HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--------YPNTNW--AVGT 209
              H  +ARD+A+++  + T +P+  +Y  I    I              NTN    + T
Sbjct: 181 STTHAMSARDIALMTKELITKYPEIFNYSTIWMENITHVTKQGTKEFGLSNTNKLLKMAT 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN--- 266
                G+KTG T  + + + A+A +    LIAVIL A D   R   + +LL+ G+ N   
Sbjct: 241 NFEVTGLKTGSTSLAKYCLSATARKDGVELIAVILAAPDFKARFGDALTLLNYGYANCRM 300

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
             D    +                 ++        +  ++    KE   ++       + 
Sbjct: 301 YRDEDPGSVPPAVIINGIQDTVPAKLNGIFSYLTMKGEDFGGIEKEWVFEDEIKAPVNEG 360

Query: 327 TLLKNKITK 335
            +L   + +
Sbjct: 361 DILGYLVYR 369


>gi|294084619|ref|YP_003551377.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664192|gb|ADE39293.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 437

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 94/298 (31%), Positives = 151/298 (50%), Gaps = 3/298 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R F + + ++  + I+P  ++A         +++  +G V+     D    PASLTK+M
Sbjct: 17  LRAFFIFMMLSCGALIWPQQAMASK---YASIVINAESGRVMYARNADAMRYPASLTKIM 73

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  +K  +  + + I +SK A+   PS    K G +++ + A+  L+ KSAND+A
Sbjct: 74  TLYLLFEEIKSGRMDMNSRIGVSKLAASRSPSKLYLKPGQSISAEQAIYALVTKSANDVA 133

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE++  TE+ F + M   ++ LG+  T F NA G+      TTARDMA L+  ++ D
Sbjct: 134 TAVAEAISGTERNFAKRMTRKARALGMRKTVFKNASGLPHSQQKTTARDMARLAVAMRRD 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+   YF  +    KG+K+ N N  +  + G DG+KTG+  ASGFN+VAS  +    LI
Sbjct: 194 FPRLYRYFSTQNFNWKGRKFGNHNKLLAHYSGTDGIKTGYINASGFNLVASVKRHGVRLI 253

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
            VI G     +R+     +L   F      +    +      Q L    P  S  V  
Sbjct: 254 GVIFGGKTSRSRDAHMMKILDAQFKRAKPAEISAQVAAVDMPQKLPKSPPKRSNLVKV 311


>gi|52078501|ref|YP_077292.1| D-alanyl-D-alanine carboxypeptidase [Bacillus licheniformis ATCC
           14580]
 gi|52783865|ref|YP_089694.1| DacA [Bacillus licheniformis ATCC 14580]
 gi|319648529|ref|ZP_08002744.1| DacA protein [Bacillus sp. BT1B_CT2]
 gi|52001712|gb|AAU21654.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus licheniformis ATCC 14580]
 gi|52346367|gb|AAU39001.1| DacA [Bacillus licheniformis ATCC 14580]
 gi|317389377|gb|EFV70189.1| DacA protein [Bacillus sp. BT1B_CT2]
          Length = 441

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 78/372 (20%), Positives = 148/372 (39%), Gaps = 42/372 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
            ++I+A A+    F  +S A+              L++ ++G ++     D     AS+ 
Sbjct: 10  IMLIVAFAVTVGAFSPMSTAKAANDPINVDAKAAILVEASSGKILYSKNADQRLPVASMA 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           K+MT Y++   + E K            + + + +   SN   +K  + T+    +   +
Sbjct: 70  KMMTEYLLLEAIHEGKVKWDQKYTPDDYVYEISQDRSLSNVPLRKDGSYTVKELYQATAI 129

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------V 159
            SAN  A+A++E +  +E KFV+ MN  +K LG+    F+NA G+               
Sbjct: 130 YSANAAAIALSEIVAGSESKFVELMNKKAKELGMKDFKFVNATGLENKDLHGKHPSGTNA 189

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA----VGTF 210
              +  +ARDMA+L+  + +D+P+ +    I   + +         PN N+     V  +
Sbjct: 190 NEENEVSARDMALLADHLVSDYPEILDTASIAKTKFRKGTDDEMDMPNWNFMLKGLVQQY 249

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR--NTRNKVSASLLSMGFYNKT 268
            G DG+KTG T ++G    A+A +    +I+V+L A       R K +  +L   F N T
Sbjct: 250 EGVDGLKTGSTDSAGSCFTATAERNGMRVISVVLNAKGDLHTARFKETKKMLDYAFENFT 309

Query: 269 DRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
            ++      +          +   +       +      K     N + K   +K+    
Sbjct: 310 MKEFYAKGAQVKGNETVTVDKGKETEVGIVTEKAFSMPVKNGEEKNYKAKVTLNKDELTA 369

Query: 322 DFEKITLLKNKI 333
             +K   +    
Sbjct: 370 PVKKGEKVGTLT 381


>gi|320173897|gb|EFW49075.1| D-alanyl-D-alanine carboxypeptidase [Shigella dysenteriae CDC
           74-1112]
          Length = 279

 Score =  182 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 7/262 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWAMGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRNTRNKVSASLL 260
           LI+V+LGA     R   S  LL
Sbjct: 257 LISVVLGAKTDRIRFNESEKLL 278


>gi|116254096|ref|YP_769934.1| penicillin-binding protein precursor [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115258744|emb|CAK09850.1| putative penicillin-binding protein precursor [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 377

 Score =  182 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 117/317 (36%), Positives = 181/317 (57%), Gaps = 3/317 (0%)

Query: 2   RQFLVIIAMAMLSNIFP-FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R F  +  ++ +S     FL+     +   + L+D  TG V+        W PASLTKLM
Sbjct: 7   RLFAALRPLSFVSAATAVFLTSVPLAQANPHILVDVQTGRVLEHEEAFRKWYPASLTKLM 66

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y VF  ++  +  L TP+ ISK A+  P +   FK G  +TLD+ALK+L+VKSAND+A
Sbjct: 67  TVYTVFDAIRAGQISLDTPVVISKRAAAQPAAKMYFKPGQKLTLDSALKILLVKSANDVA 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  T++ FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++ D
Sbjct: 127 VAVAEAIGGTQEGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  YF ++G     +  PN N  +G F GADGMKTGF CASGFN + SA +  ++L+
Sbjct: 187 FPQYAGYFSLEGFTNGQQNVPNLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRTLV 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           +V+LG      R   +A+LL  GF  +         ++ +       +V +I  ++C+ +
Sbjct: 247 SVVLGTDSLAARADATANLLQKGFTTQPASNDTLGSLRPYGVGQD--QVTDIGADICSAK 304

Query: 301 KEIINYNTQMKEAKDKE 317
              +   T+ +  + K 
Sbjct: 305 GAKVRSETRDEVGRMKV 321


>gi|327188719|gb|EGE55918.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli
           CNPAF512]
          Length = 366

 Score =  182 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 122/320 (38%), Positives = 184/320 (57%), Gaps = 11/320 (3%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR  +F V    A L+++    +         + L+D  TG V+        W PASLTK
Sbjct: 1   MRLLRFTVAATAAFLASVSLAQANP-------HILVDVQTGRVLEHEEAFRKWYPASLTK 53

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMT Y VF  ++  +  L TPI +SK A+  P +   FK G  +TLD+ALK+L+VKSAND
Sbjct: 54  LMTVYTVFDAIRAGQISLDTPIVMSKRAAAQPAAKMYFKPGQKLTLDSALKILMVKSAND 113

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           IAVA+AE++  T++ FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++
Sbjct: 114 IAVAVAEAVGGTQEGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALR 173

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFPQY  YF ++G     +  PN N  +G F GADGMKTGF CASGFN + SA +  ++
Sbjct: 174 RDFPQYAGYFSLEGFTTGQQNVPNLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRT 233

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L++V+LG      R   +A+LL  GF  +         +K + Q     +V +I+ ++C+
Sbjct: 234 LVSVVLGTDSLAARADATANLLQKGFTTQFPGNDTLGSLKPYGQGQD--QVTDITADICS 291

Query: 299 TQKEIINYNTQMKEAKDKES 318
            +   I   T+ +  + K +
Sbjct: 292 AKGAKIRSETRDEVGRMKVT 311


>gi|302386799|ref|YP_003822621.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           saccharolyticum WM1]
 gi|302197427|gb|ADL04998.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           saccharolyticum WM1]
          Length = 411

 Score =  182 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 14/325 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              + P   L++ +TG +I E   D   +PAS+TK+MT  ++F  L   K  LT  +  S
Sbjct: 51  PALQSPSAVLMEASTGQIIYEKNADEKRSPASITKIMTLILIFDALDSGKIKLTDEVVTS 110

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +A     S    ++G   T+D  +K +++ S ND +VA+AE +  TE +FV+ MN  + 
Sbjct: 111 AHAKSMGGSQVFLEEGEVQTVDTLIKCIVIASGNDASVAMAEYIAGTEDEFVKMMNERAA 170

Query: 144 NLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--- 199
            LG++ THF +  G+ + G H TTARD+A++S  +   +PQ  +Y  I    I       
Sbjct: 171 GLGMTNTHFEDCCGLTESGTHVTTARDIALMSRELINKYPQIHNYSTIWMENITHVTKQG 230

Query: 200 -----YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                  NTN    + T     G+KTG T  + + + A+A +    LIA I+ A D   R
Sbjct: 231 TKEFGLSNTNKLLKMATNFNVTGLKTGSTSVAKYCLSATAEKDGVRLIASIMAAPDYKIR 290

Query: 253 NKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
              + +LL+ G+ N     D++ +           +                +  +++T 
Sbjct: 291 FADAQTLLNFGYANCKLYEDKEMLPLPEMVVDNGVVDQVPLKYGGSFSYLSLKGEDFSTI 350

Query: 310 MKEAKDKESHFIDFEKITLLKNKIT 334
            K+ + + S     E+     + I 
Sbjct: 351 EKKLELEPSVSAPVEEGQKAGSLIY 375


>gi|74316284|ref|YP_314024.1| serine-type D-ala-D-ala carboxypeptidase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74055779|gb|AAZ96219.1| serine-type D-ala-D-ala carboxypeptidase [Thiobacillus
           denitrificans ATCC 25259]
          Length = 377

 Score =  182 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 155/342 (45%), Gaps = 9/342 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+   + +A  + ++    ++         + ++D  +G  +A + PD P  PASLT+LM
Sbjct: 7   MKFLWLTLAWLLSASA---IAAPTGIAARAWVIVDQTSGRELASHQPDLPLAPASLTQLM 63

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T YV+   ++     L   + +   A+E   +    K G  + +D  L+ ++V+SA+D  
Sbjct: 64  TVYVLLGDIRRNALRLDAEVRVPDAAAEADGARVFLKPGERVRVDTLLRAILVQSASDAT 123

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           V +A +   +E  FV+ MN  +  LG+  THF NA G+ Q GH ++ARD+A+L   +  +
Sbjct: 124 VTLATATDGSEAAFVERMNREAARLGMKRTHFANATGLAQPGHVSSARDLAVLGRALLRE 183

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            P     F  K   + G  Y N N  +       G+K G    SG++ VASA +G+Q  +
Sbjct: 184 HPAQQALFAQKEFTLDGLTYYNANRLLWRDGTVTGLKVGRNPESGYSAVASAQRGEQRRV 243

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE- 295
           AV+LGA     R + +  LL+ GF                +   Y+    +      ++ 
Sbjct: 244 AVVLGARSDAQRTQDALRLLNYGFEKFDSVLLYRARQPVKVVRLYRGTRQSVGIGFEQDF 303

Query: 296 -VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +   +  +     ++   +   +     ++I LL+  +  K
Sbjct: 304 HLLAPRGSLPRVKAEIVTQRPIVAPIHKGQRIGLLRLTLDGK 345


>gi|229603861|ref|YP_002864665.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0248]
 gi|229268269|gb|ACQ49906.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus anthracis
           str. A0248]
          Length = 438

 Score =  182 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKFKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|194018065|ref|ZP_03056670.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus pumilus ATCC
           7061]
 gi|194010257|gb|EDW19834.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus pumilus ATCC
           7061]
          Length = 441

 Score =  182 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 85/377 (22%), Positives = 149/377 (39%), Gaps = 43/377 (11%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++Q +V I+A+A++   F  +S                 L++ +TG ++     +     
Sbjct: 6   LKQLMVSILALALIVTAFTPMSKAKAAEDPFNVNAKAAILIEASTGKILYSKNAEQRLPI 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALK 109
           AS+ K+MT Y++   + E K            + + + +   SN   +K  + T+    +
Sbjct: 66  ASMAKMMTEYLLLEAIAEGKVKWDQTYTPDDYVYEISQDRSLSNVPLRKDGSYTVKELYQ 125

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
              + SAN  A+ +AE +  +E KFV+ MN  +K LGL+   F+NA G+           
Sbjct: 126 ATAIYSANAAAIGLAEVIAGSESKFVEKMNAKAKELGLTNYKFVNATGLENKDLHGKQPK 185

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA---- 206
                     +A+DMA+L+  +  D P+ +    I   + +         PN N+     
Sbjct: 186 GTGPDEESEVSAKDMALLAQHLIKDHPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGL 245

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGF 264
           V  + G DG+KTG T ++G +   +A QGD  +IAVIL A       R  V+  L    F
Sbjct: 246 VKEYKGVDGLKTGSTDSAGSSFTGTAKQGDMRVIAVILNAKGNLHTARFDVAKKLFDYAF 305

Query: 265 YNKTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
            N T ++      +          +           E      K     + + K   +K 
Sbjct: 306 KNFTMKEMYKKGQQIKGHENIEVDKGKDKEVPVVTKEAFSVPVKNGDEKSFKAKVNIEKT 365

Query: 318 SHFIDFEKITLLKNKIT 334
                 +K T +    T
Sbjct: 366 KLEAPIKKGTKVGMLTT 382


>gi|65317476|ref|ZP_00390435.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
          Length = 443

 Score =  182 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKFKWDQKIKVSEYAYKVSQDAXLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|212637859|ref|YP_002314379.1| D-alanyl-D-alanine carboxypeptidase [Anoxybacillus flavithermus
           WK1]
 gi|212559339|gb|ACJ32394.1| D-alanyl-D-alanine carboxypeptidase [Anoxybacillus flavithermus
           WK1]
          Length = 447

 Score =  182 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 134/378 (35%), Gaps = 44/378 (11%)

Query: 2   RQFLV-IIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           + F++ I+AM       P  + AE      +     L++  TG ++ +   D     AS+
Sbjct: 11  KSFIISIVAMFSFMMTLPQQTKAEEDVLNIEADAAILVEAETGKILYQKNIDAVLGIASM 70

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT Y++   + E +       T+S+   +                   ++ L    A
Sbjct: 71  TKMMTEYLLLEAIHEGRVKWDQEYTVSEYVYQISQKRDLSNVPLRKDGKYTVRELYEAMA 130

Query: 117 NDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------- 158
              A     ++ +    +E  FV+ MN  ++ LGL    F+NA G+              
Sbjct: 131 IYSANGATVAIAEIVGGSETNFVKMMNEKAQELGLKDYKFVNATGLNNKDLGGLHPAGSG 190

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGT 209
               +  +AR +A L++ +  +FP+ +    I     +       K  N NW     V  
Sbjct: 191 DNEENVMSARAVATLAYHLYHEFPEILETASIPRKYFREGTDDQIKMDNWNWMLPGLVAA 250

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-----TRNKVSASLLSMGF 264
           + G DG+KTG+T  +G+    +A +     I V++ A         +R + +  +L   F
Sbjct: 251 YEGVDGIKTGYTEFAGYCFTGTAERNGMRFITVVMNAKTNGKGTYLSRFEQTRKMLDYAF 310

Query: 265 YNKTDRKKINYI-------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
            N T +K                 +           + +    K       +     +KE
Sbjct: 311 SNYTVQKLYPKGYTTKKHKTVTVKKGKEKEVAIATKQPLSLVIKRGEEKKYKPVVVIEKE 370

Query: 318 SHFIDFEKITLLKNKITK 335
           +     +K   +     K
Sbjct: 371 TLTAPVKKGQKIGYMYVK 388


>gi|229100275|ref|ZP_04231166.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-29]
 gi|228683170|gb|EEL37157.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-29]
          Length = 453

 Score =  182 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 23  KRFIAIVTVLALFCSIVVTSGRASAETVPAIDVEAGSAILIEANSGKILYQKNADESLAI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 83  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 142

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 143 AMAIYSANGATIALVEEIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHPE 202

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFPQ ++  +I     +          N NW     
Sbjct: 203 GTTLDEKNKMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 262

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 263 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 322

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                       + V    + V     +  N   + +     +  
Sbjct: 323 FEVKNVYGKDAVVKGHETVRVANAKDKDVVVQTKQAVALPMPKGNNDVYKKEFKVSNKEQ 382

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 383 EAPIKKGVTISKMII 397


>gi|116250789|ref|YP_766627.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255437|emb|CAK06513.1| putative D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein) [Rhizobium leguminosarum bv. viciae 3841]
          Length = 464

 Score =  182 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 8/323 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR+ L  +    L+   P  ++A         +LD  TG V+A    D   +PASLTK+M
Sbjct: 38  MRKLLAAVLTVTLAVSAPLAALA----GNASLILDARTGKVLASENADTLNHPASLTKMM 93

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  LK  K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A
Sbjct: 94  TLYLTFEALKRGKITWDTPIKMSKYAASRPPTKLGVKAGGTITVREAVYGMIVKSANDAA 153

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E  F + M   ++ LG+S T F+NA G+      TTARDM+ L+  +  +
Sbjct: 154 SAMGEKLAGSESGFARVMTAKARQLGMSRTVFVNASGLPDGRQVTTARDMSTLAIALMKN 213

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P     F       +G+     N  +  + G DG+KTG+T ASGFN+V++   G++ ++
Sbjct: 214 YPNEYRLFSTASFNFRGRTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVV 273

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTD----RKKINYIIKDFYQQNLSNEVPNISEEV 296
            V+LG     +R+   A LL       +     +   +   ++  +   + E  ++   +
Sbjct: 274 GVVLGGRTARSRDAKMAGLLDRYLGRASSSGGAKLVASVGAREPVEVASAAEASDVPVPL 333

Query: 297 CTTQKEIINYNTQMKEAKDKESH 319
              +         +  A D    
Sbjct: 334 NAPRPADDLAAKSLAYADDAVVP 356


>gi|229103097|ref|ZP_04233784.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-28]
 gi|228680286|gb|EEL34476.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-28]
          Length = 453

 Score =  182 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 134/375 (35%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 23  KRFIAIVTVITLFCSIVVTSGRASAETVPAIDVEAGSAILIEANSGKILYQKNADESLAI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 83  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 142

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+NA G+           
Sbjct: 143 AMAIYSANGATIALVEEIAGKEVNFVKMMNDKSKEFGMKHYKFVNATGLTNQDLKGYHLE 202

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 203 GTNLDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQKGGKYPIDMVNFNWMLKGL 262

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 263 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKANSHTARFDETKKLYDYGFAN 322

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +        
Sbjct: 323 FEVKKVYGKDAVVKGHETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVPNTEQ 382

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 383 EAPIKKGVTISKMII 397


>gi|126733463|ref|ZP_01749210.1| Probable penicillin-binding protein [Roseobacter sp. CCS2]
 gi|126716329|gb|EBA13193.1| Probable penicillin-binding protein [Roseobacter sp. CCS2]
          Length = 464

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 103/311 (33%), Positives = 152/311 (48%), Gaps = 5/311 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            T       ++D  TG V+     D   +PASLTK+MT YV F  ++  +  L TP+ IS
Sbjct: 3   ATAAPYAAMVMDARTGEVLHSRNADTQLHPASLTKMMTLYVAFQAIERGEITLDTPVRIS 62

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A+  PPS    + G T+ L   L+   VKSAND A AI E++  +E  F   MN T++
Sbjct: 63  RLAASEPPSKLGLRSGQTIRLRFLLRAAAVKSANDAATAIGEAISGSEDAFATRMNRTAR 122

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +G+  T+F NAHG+ Q GH +TARDM++L   +  DFPQY + F  +  +    +  +T
Sbjct: 123 AMGMRNTNFRNAHGLTQSGHLSTARDMSVLGRHVIYDFPQYYNLFSRRSADAGVARVRHT 182

Query: 204 NWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           N     ++ G DG+KTG+T A+GFN+VASA +G + +IA + G    + RN     L+ M
Sbjct: 183 NRRWLDSYAGGDGIKTGYTRAAGFNLVASAQRGQERVIATVFGGSSTSARNARITELMDM 242

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEV----PNISEEVCTTQKEIINYNTQMKEAKDKES 318
           GF     R  I            SN      P     V       I    +   A  +E 
Sbjct: 243 GFNRAPSRATIRRPNPPAAMLTSSNSQGQVNPGKIVRVSGLITRSIRPTARPVAAPVQED 302

Query: 319 HFIDFEKITLL 329
             +      ++
Sbjct: 303 VLVAAVDADVI 313


>gi|150396511|ref|YP_001326978.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
 gi|150028026|gb|ABR60143.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
          Length = 384

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/342 (21%), Positives = 132/342 (38%), Gaps = 12/342 (3%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+    +    A++S      + A   K     L+D  TG V+     D P  PASL KL
Sbjct: 3   MKWLAAVGFLAAIVSGQAVAQTPAFDTKAKQIYLVDAETGTVLFSRDEDAPVPPASLAKL 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVK 114
           M   VVF  L + +    T   +S++A          S       S + + + ++   V+
Sbjct: 63  MAMKVVFEALDKGELTPDTNFLVSEHAWRTGGAPSGTSTMFAAIKSRIRVADLIQGATVQ 122

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
            AND  + +AE +  +E  F + M   ++ +GL    F NA G+   G+  T R++  L+
Sbjct: 123 LANDACIILAEGMAGSEPAFAERMTKRAREIGLPVATFKNATGLPHPGNTITMRELVALA 182

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +    P Y   +     E       N N  +   +G DG+ TGF    GF++ AS  +
Sbjct: 183 RHLYEAHPNYYPLYSQPEFEWNKILQRNKNPLIAAKIGVDGLATGFAEGFGFSVAASMQR 242

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPN 291
           G++ +   + G      R + S  +L         R+  +      +        + V  
Sbjct: 243 GERRVYLAMSGLESEKERIEESRRVLDWAMTAFEKRRIFSDGETIGEASVYGGADSRVAL 302

Query: 292 IS---EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           ++    +V    K       ++       +     +++ ++K
Sbjct: 303 VAGGPVDVLLPVKNSERLTARIVYKWPLNAPVAAGQQVGVVK 344


>gi|13470655|ref|NP_102224.1| penicillin binding protein [Mesorhizobium loti MAFF303099]
 gi|14021397|dbj|BAB48010.1| penicillin binding protein [Mesorhizobium loti MAFF303099]
          Length = 388

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/322 (22%), Positives = 132/322 (40%), Gaps = 11/322 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              K     ++D +TG V+     D P  PAS+ KLMT  VVF+ +K  +  L     +S
Sbjct: 30  FETKATQAFMIDADTGTVLFSKDADKPIPPASMAKLMTMEVVFNAIKSGRLKLDDTFVVS 89

Query: 84  KNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +NA          S    K  S + L++ ++ + V++AND  + IAE +  +E  F   M
Sbjct: 90  ENAWRKGGAPSGTSTMFAKLKSAIRLEDLIQGVTVQAANDGCIVIAEGMAGSEDNFAAQM 149

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
              ++ +GL  + F+N+ G+   G  TT R++A L+  +  D+P +  Y+ +K       
Sbjct: 150 TERARQIGLKTSTFVNSTGLPADGQQTTVRELAQLALHLWRDYPDFYRYYGLKDFTWNKI 209

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              N N  +   +GADG+  G +  +GF IVAS       +I  + G  +   R + +  
Sbjct: 210 SQKNRNPLLAMDIGADGLAVGASEVAGFGIVASVSHNGTRVIMAMNGLANDKERAEEARK 269

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNTQMKE 312
           LL  G  +    +           Q        ++       ++            ++  
Sbjct: 270 LLDWGARSFEKTEIFAKDEVVGEAQVFGGAKSGVTLKAKGPIDIFLPITNRDKLTARIVY 329

Query: 313 AKDKESHFIDFEKITLLKNKIT 334
                +   + + +  L+  I 
Sbjct: 330 TGPVAAPVEEGQPVGALRVWIG 351


>gi|332653043|ref|ZP_08418788.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcaceae bacterium
           D16]
 gi|332518189|gb|EGJ47792.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcaceae bacterium
           D16]
          Length = 367

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 79/314 (25%), Positives = 132/314 (42%), Gaps = 13/314 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   T       L++  +G V+     D P   AS TKLMTA V           L   +
Sbjct: 25  AAEVTVSAQSAVLMEAESGRVLYAKDADTPRLIASTTKLMTALVALESGH----SLEEDV 80

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           TI   A+    S+   K G T+ L+  L  +++ S ND A A+A +   + + F Q MN 
Sbjct: 81  TIPAEAAGVEGSSLYLKTGETVKLETLLYGMLLHSGNDAATAVALTCAGSLEAFAQKMNE 140

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            S+ LG++ +HF N  G+    HY++A DMA+L+       P+       +   ++G+ +
Sbjct: 141 KSQQLGMTNSHFTNPTGLDGEEHYSSAYDMALLARACLA-VPELKEITATRSTTMEGRTF 199

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +  + G  GMKTG+T A+G  +V++A +   +LIAV L A          A++L
Sbjct: 200 VNHNKLLWRYEGCVGMKTGYTQAAGRTLVSAAERDGMTLIAVTLNAPSD---WADHAAML 256

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVP----NISEEVCTTQKEIINYNTQMKEAKDK 316
             GF +    + +             + VP       E +           T+++     
Sbjct: 257 DYGFEHYHMEEAVKAGQSLCSLPVSGSLVPFVSLKAEETLRWPVGPGETLETRLELG-GL 315

Query: 317 ESHFIDFEKITLLK 330
            S     +    + 
Sbjct: 316 TSLEAPVQAGVPMG 329


>gi|221639986|ref|YP_002526248.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           KD131]
 gi|221160767|gb|ACM01747.1| Serine-type D-Ala-D-Ala carboxypeptidase precursor [Rhodobacter
           sphaeroides KD131]
          Length = 389

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 137/340 (40%), Gaps = 13/340 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +    +L  +    ++A   +     + D  T  V+ +     P  PAS++KLMT  ++F
Sbjct: 6   LFLALILGLVTALPALAFDTRARAAWVYDVTTHTVLLDKNAHEPLPPASMSKLMTLNMLF 65

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L++ +  + T   +S  A +   S    ++    T++  +  +IV S ND  V +AE 
Sbjct: 66  EALRDGRVTMETTFAVSTKAKQMGGSKMFVEERDRPTVEELIHGIIVNSGNDACVVVAEG 125

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L  TE  F + M   +K LG++ + F N+ G    GH  +  D+ IL+ R+  +FP++  
Sbjct: 126 LNGTESDFARAMTVRAKALGMTDSTFTNSSGWPDPGHRMSVHDLGILAVRLIEEFPEFYP 185

Query: 187 YFQIKGLEIKGKKYPNTNWA-------VGTFLGADGMKTGFTCASGFNIVASA-IQGDQS 238
           YF       K +   N N               ADG+KTG T  +G+ +V SA  +  + 
Sbjct: 186 YFSHTEFNYKDRVPSNANNRNPLLRLGPNGDWTADGLKTGHTQEAGYGLVGSAVQKDGRR 245

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISE 294
           ++ V+ G      R +    +++  F     +  +    +    D +  N S      +E
Sbjct: 246 IVFVLTGLATEADRAQEGEQIVNWAFRQFVQKTLVTKGQRVTEADVWLGNASRVGLVPAE 305

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +V      ++  +    E                L   + 
Sbjct: 306 DVKLLVPALVQ-DNVTAEVSYTGPLRAPIAAGQELAELVI 344


>gi|295091220|emb|CBK77327.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cf.
           saccharolyticum K10]
          Length = 404

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 14/337 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S            + P   L++ +TG V+ E   D   NPAS+TK+MT  + F  LK  
Sbjct: 33  VSAPASAALEGPQIQAPCGILMEASTGTVLYEKNADEARNPASVTKIMTLLLTFDALKSG 92

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K  LT  +  S +A     S    ++G   T++  +K +++ S ND +VA+AE +   E 
Sbjct: 93  KIALTDEVVTSAHAKSMGGSQVFLEEGEVQTVETLIKCIVIASGNDASVAMAEYIAGDEA 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            FVQ MN  +K LG+   +F +  G+     H  +ARD+A+++  + T +P+  +Y  I 
Sbjct: 153 SFVQMMNERAKGLGMEQANFEDCCGLTDSASHAMSARDIALMTRELITKYPEIFNYSTIW 212

Query: 192 GLEIKGKK--------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              I              NTN    + T     G+KTG T  + + + A+A +    LIA
Sbjct: 213 MENITHVTKQGTKEFGLSNTNKLLKMATNFEVTGLKTGSTSTAKYCLSATARKDGVELIA 272

Query: 242 VILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           VIL A D   R   + +LL+ G+ N    TD                      I +    
Sbjct: 273 VILAAPDYKARFNDAVTLLNYGYANCRLYTDEDVGEIPEVQILGGVQDTVPVRIDKPFSY 332

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 +++   KE   +       ++  ++   + +
Sbjct: 333 LGTSGEDFSGIEKEWIFETELKAPVQEGEIVGKLVYR 369


>gi|169825632|ref|YP_001695790.1| D-alanyl-D-alanine carboxypeptidase [Lysinibacillus sphaericus
           C3-41]
 gi|168990120|gb|ACA37660.1| D-alanyl-D-alanine carboxypeptidase precursor [Lysinibacillus
           sphaericus C3-41]
          Length = 443

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 131/367 (35%), Gaps = 43/367 (11%)

Query: 13  LSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +    P  + AET     +    L+D ++G ++ E   D     AS+TK+MT Y++   +
Sbjct: 21  IFAGIPAKASAETDLGLTVDAAILIDADSGKILYEQNADTSLGIASMTKMMTEYLLLDAI 80

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                       ++        + +             ++ L    A   A A   ++ +
Sbjct: 81  DAGTVKWDQEYHVTDYTYRMSQNRALSNVPLRRDGSYTIRELYEAMAIYSANAATVAIAE 140

Query: 130 TEKK----FVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMA 171
           T       F++ MN  ++ LGL    F+NA G+               +  +   A+ +A
Sbjct: 141 TIAGTETEFLKLMNKKAEELGLEGYKFVNATGLNNADLFGMHPAGTGPEDENVMPAKYVA 200

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTC 222
            L++ +  D P+ +   QI     +          N N+     V  + G DG+KTG T 
Sbjct: 201 KLAYHLLKDHPKVLETSQITKKTFREGTEDAIEMSNWNFMLPGLVFEYQGVDGLKTGTTN 260

Query: 223 ASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
            +G     +A +    LIAV++      G      R   +A L + GF   + ++ +   
Sbjct: 261 FAGHCFTGTAERNGTRLIAVVMKAVDASGQGSYKARFDATAKLFNYGFSQFSKQEILPAN 320

Query: 277 -------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                       +         + E +    K       + K   DK+S     +K T++
Sbjct: 321 YTFKDQKTVKVTKGKEDKVEIAVKEPISFMIKSSDKDLYKPKLVLDKKSLEAGVKKDTVV 380

Query: 330 KNKITKK 336
              + ++
Sbjct: 381 GKVVIER 387


>gi|188585838|ref|YP_001917383.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350525|gb|ACB84795.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 408

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 13/343 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+ + +          +           L++  TG  I EN  +  W PASLTK+MT  +
Sbjct: 12  LLFLMIVNPLLSPSVSAEEFDFDAESVILIEAETGRTIYENNAEKSWPPASLTKVMTLVI 71

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
               L E +  L     +S  A++   S    ++   +T+++ L  + V SAND  VA+A
Sbjct: 72  GLEALNEGELELEETTRVSAKANQTGGSQMFLRENQEVTIEDLLTGIAVVSANDGCVALA 131

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +   FV  MN  ++ +GL  T+F + HG+   G Y  ARD+A LS     + P+ 
Sbjct: 132 EHMEGSVNNFVNRMNEKAEEIGLENTNFKDPHGLASDGQYMNARDVARLSQYAVNETPKI 191

Query: 185 MHYFQIKGLEIKGK-KYPNTNWA--------VGTFLGADGMKTGFTCASGFNIVASAIQG 235
           +    I G +   +    N N            ++ G DG+KTG    +G+N V +A + 
Sbjct: 192 LELESITGFQFNIESTQYNRNLMLPDHPQTTRYSYEGTDGLKTGQIEEAGYNFVGTAQRD 251

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPN 291
           D  LIAV+LGA ++  R  ++  L   GF      K  +   +    D    +    +  
Sbjct: 252 DMRLIAVVLGAEEQTERFNITRQLFDHGFSEYQKIKLFDEGDELEQVDVKDGSERQTMAI 311

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              E   T K   +   +       E      +K   L   + 
Sbjct: 312 SETEANVTTKFDNDQELEFVFQPKDEELRAPIQKGEYLGELLV 354


>gi|229161434|ref|ZP_04289415.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus R309803]
 gi|228621971|gb|EEK78816.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus R309803]
          Length = 416

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 129/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +            A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTFGKASAETVSAIDVEAGSAILVEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           ++  K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VENGKLKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EEIAGKEADFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPEGTTPDEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFP+ +   +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPKILDTAKIPKKTFQQGGKYPIDMTNFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +K          
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKANSHAARFDETKKLYDYGFANFEMKKVYGKDAVVNG 300

Query: 282 QQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +          + V    + V     +      + +     E      +K   +   I 
Sbjct: 301 NETVRVANAKDKDVVVQTKQAVSLPIPKNNKDVYKKEFKVLNEEQEAPIKKGVTISKMII 360


>gi|229165003|ref|ZP_04292801.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH621]
 gi|228618455|gb|EEK75482.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH621]
          Length = 443

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 144/374 (38%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTVLTLAFGVFAPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G   T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKISQDASLSNVALENGGLYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MN+ +K LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKAKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I     + +K      N NW     V
Sbjct: 192 GTTPDEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKVFRPEKEKFGMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             +K          ++ +  E            + V     +      + +  +  +   
Sbjct: 312 EMKKMYEKGSSVKGKETVRVENAKDKDVAVQTKQAVSLPVPKGSKDVYKTEFKEGNKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APLKKGVALGQMVV 385


>gi|229159188|ref|ZP_04287214.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus R309803]
 gi|228624269|gb|EEK81069.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus R309803]
          Length = 443

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 144/374 (38%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLALVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MNN +K LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNNKAKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK----GKKYPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I     +      K  N NW      
Sbjct: 192 GTTPDEENKMSAKDVATLAQHLLKDYPKVLDTAKIPMKVFRPEKEQFKMLNWNWMLKGLS 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +    LI+V++    R  R   +  L   GF N 
Sbjct: 252 KAYDGVDGLKTGSTPEAGECFTGTVERNGMRLISVVIKTNSRQARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+          +      + V     +      + +  +  +   
Sbjct: 312 EMKQMYKKDSSVKGQETLRVENAKDKDVAVQTKQAVSLPMPKGSKDIYKTELKEANKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|283795540|ref|ZP_06344693.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
 gi|291077207|gb|EFE14571.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
          Length = 404

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 144/337 (42%), Gaps = 14/337 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S            + P   L++ +TG V+ E   D   NPAS+TK+MT  + F  LK  
Sbjct: 33  VSAPASAALEGPQIQAPCGILMEASTGTVLYEKNADEARNPASVTKIMTLLLTFDALKSG 92

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K  LT  +  S +A     S    ++G   T++  +K +++ S ND +VA+AE +   E 
Sbjct: 93  KIALTDEVVTSAHAKSMGGSQVFLEEGEVQTVETLIKCIVIASGNDASVAMAEYIAGDEA 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            FVQ MN  +K LG+   +F +  G+     H  +ARD+A+++  + T +P+  +Y  I 
Sbjct: 153 SFVQMMNERAKGLGMEQANFEDCCGLTDSASHAMSARDIALMTRELITKYPEIFNYSTIW 212

Query: 192 GLEIKGKK--------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              I              NTN    + T     G+KTG T  + + + A+A +    LIA
Sbjct: 213 MENITHVTKQGTKKFGLSNTNKLLKMATNFEVTGLKTGSTSTAKYCLSATARKDGVELIA 272

Query: 242 VILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           VIL A D   R   + +LL+ G+ N    TD            +         I +    
Sbjct: 273 VILAAPDYKARFNDAVTLLNYGYANCRLYTDEDVGEIPEVQILRGVQDTVPVRIDKPFSY 332

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 +++   KE   +       ++  ++   + +
Sbjct: 333 LGTSGEDFSGIEKEWIFETELKAPVQEGEIVGKLVYR 369


>gi|299542091|ref|ZP_07052407.1| D-alanyl-D-alanine carboxypeptidase precursor [Lysinibacillus
           fusiformis ZC1]
 gi|298725406|gb|EFI66054.1| D-alanyl-D-alanine carboxypeptidase precursor [Lysinibacillus
           fusiformis ZC1]
          Length = 443

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 139/370 (37%), Gaps = 45/370 (12%)

Query: 11  AMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             +    P  + AET     +    L+D ++G ++ E   D     AS+TK+MT Y++  
Sbjct: 19  FSIFAGIPAKANAETDLGLTVDAAILIDADSGKILFEQNADTSLGIASMTKMMTEYLLLD 78

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +   K        ++        + +             ++ L    A   A A   ++
Sbjct: 79  AIDAGKVKWDQEYHVTDYTYRMSQNRALSNVPLRRDGSYTIRELYEAMAIYSANAATVAI 138

Query: 128 CKTEKK----FVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARD 169
            +T       F++ MN  ++ LGL    F+NA G+               +  +   A+ 
Sbjct: 139 AETIAGSETEFLKLMNKKAEELGLEGYKFVNATGLNNADLFGMHPSGTGPEDENVMPAKS 198

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA----VGTFLGADGMKTGF 220
           +A L++ +  D P+ +   +I     +       K  N N+     V  + G DG+KTG 
Sbjct: 199 VAKLAYHLLKDHPKVLETSKIAKKTFREGTEDAIKMSNWNFMLPGLVYEYQGVDGLKTGT 258

Query: 221 TCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           T  +G     +A +    LIAV++      G      R   +A L + GF   + ++ + 
Sbjct: 259 TNFAGHCFTGTAERNGTRLIAVVMKAVDAKGQGSYEARFDATAKLFNYGFSQFSKQEIL- 317

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK--------DKESHFIDFEKI 326
                F  Q          ++V    KE I++  +  +          DK+S   D +K 
Sbjct: 318 PGNYTFKNQKTVKVTKGKEDKVSIAVKEPISFMIKSSDKDLYKPTLVLDKKSLEADVKKD 377

Query: 327 TLLKNKITKK 336
           T++   + ++
Sbjct: 378 TVVGKVVIER 387


>gi|254294362|ref|YP_003060385.1| serine-type D-Ala-D-Ala carboxypeptidase [Hirschia baltica ATCC
           49814]
 gi|254042893|gb|ACT59688.1| Serine-type D-Ala-D-Ala carboxypeptidase [Hirschia baltica ATCC
           49814]
          Length = 322

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 93/265 (35%), Positives = 140/265 (52%), Gaps = 6/265 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ +  +A+++            + +     ++D +T  V+     D P  PAS+TK+M
Sbjct: 11  IKKLITALALSLCVIA------PASAEKYASYVIDIDTAKVLHSRNADDPRFPASITKVM 64

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+VF  LK  + MLT  + IS+ AS+ PPS    K G T++++ A+  L+ KSAND+A
Sbjct: 65  TLYMVFDALKAGELMLTDELKISREASKQPPSKLYLKPGETISVETAINALVTKSANDVA 124

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           V IAE L  +E +F   M   ++ LGL  T F NA G+      +TA D+AIL   +  D
Sbjct: 125 VVIAERLGGSETRFAALMTAKARQLGLKNTRFKNASGLPNAAQLSTAHDLAILGEAMLRD 184

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
              Y  YF     +     Y N N  + +  G DG+KTG+T ASGFN++ASA +    +I
Sbjct: 185 HADYYDYFSTTEFKYGRANYKNHNKLLESVRGVDGIKTGYTRASGFNLLASAERDGHRVI 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFY 265
           AV+LG     +RN     LL   F 
Sbjct: 245 AVMLGGATSKSRNAHVTDLLEAAFD 269


>gi|222093783|ref|YP_002527831.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|221237829|gb|ACM10539.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
          Length = 435

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 4   KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 64  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 124 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 183

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 184 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 243

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 244 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 303

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 304 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 363

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 364 APIKKGAALGQMVI 377


>gi|187779539|ref|ZP_02996012.1| hypothetical protein CLOSPO_03135 [Clostridium sporogenes ATCC
           15579]
 gi|187773164|gb|EDU36966.1| hypothetical protein CLOSPO_03135 [Clostridium sporogenes ATCC
           15579]
          Length = 407

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 85/325 (26%), Positives = 140/325 (43%), Gaps = 14/325 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L++  TG VI E      + PAS+TK+MT  +    +   K  LT  +TIS+
Sbjct: 53  DVEAKSALLIEPTTGKVIYEKNSHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISE 112

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA +   S      G   T++  LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ 
Sbjct: 113 NAKKMGGSTMLLDVGEERTVEELLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQK 172

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKY 200
           L +  T F N  G+ + GH T+A D++I+S  +            +   I          
Sbjct: 173 LNMKDTSFKNCTGLSEEGHKTSAYDISIMSRELLKHKQILKYTGTYMETISEGRKSPIGL 232

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  V  F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L+
Sbjct: 233 VNHNKLVRFFKGCDGLKTGFTDEAKYCISATATRDGVRMLAVIMGAPTYKIRNKDASKLM 292

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK----- 311
           + GF     +  +             +     +    EE+    ++        K     
Sbjct: 293 NYGFSKFQCKTIVKKGDVISKIPLNSKGDKYFMAKSCEELNAIVEKGKKTKITNKCIIDE 352

Query: 312 -EAKDKESHFIDFEKITLLKNKITK 335
            + + K +  +   +     N I K
Sbjct: 353 NKKEYKINEEVGICEFYSDGNLIGK 377


>gi|227822156|ref|YP_002826127.1| penicillin binding protein [Sinorhizobium fredii NGR234]
 gi|227341156|gb|ACP25374.1| penicillin binding protein [Sinorhizobium fredii NGR234]
          Length = 384

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/342 (21%), Positives = 132/342 (38%), Gaps = 12/342 (3%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+ F ++ I  A++       + A   K     L+D  TG V+     D P  PASL KL
Sbjct: 3   MKWFAIVGILAAIVQGEAAAQTPAFDTKAKQIYLIDAETGTVLFARGEDEPVPPASLAKL 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVK 114
           M   VVF  L++ +        +S++A          S       S + + + ++   V+
Sbjct: 63  MAMEVVFEALEKGELTQEAVFPVSEHAWRTGGAPSGTSTMFAAIKSQVRVADLIQGATVQ 122

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
            AND  + +AE +  +E  F Q MN  +++LG+    F NA G+   G+  T R++  LS
Sbjct: 123 LANDACIILAEGMAGSEAAFAQRMNARARDLGMPVATFKNATGLPDPGNRVTMRELVTLS 182

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             ++     +   +     E       N N  +   +G DG+ TGF    GF++ AS  +
Sbjct: 183 RHLREAHANFYRLYAQPEFEWNKILQRNKNPLIAANVGVDGLATGFAEGFGFSLAASMQR 242

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS- 293
           GD+ +   + G      R + S  +L     N   R+                   +++ 
Sbjct: 243 GDRRVYLAMGGLETDKERTEESRRVLDWAMTNFEKRRIFANGETIGEASIYGGAASHVAL 302

Query: 294 -----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 +V            ++       +     + + ++K
Sbjct: 303 VAGGPVDVLLPVNNPERLTARIVYKWPLTAPVAAGQLVGVVK 344


>gi|188580422|ref|YP_001923867.1| serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium populi
           BJ001]
 gi|179343920|gb|ACB79332.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium populi
           BJ001]
          Length = 499

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 5/272 (1%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  +G V+       PW PAS+TKLMT YV    +++ K  L T +T+S  A+  PP
Sbjct: 31  LVVDAESGKVLYSQGATDPWYPASITKLMTTYVALDMVRQGKVSLDTLLTVSPAAAAEPP 90

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   FK G+ +TLDNALK+++VKSAND++ AI E L  + + F   MN T+  +G+  + 
Sbjct: 91  SKMGFKPGTQITLDNALKIIMVKSANDVSWAIGEGLGGSVEGFADMMNETAHRIGMRESR 150

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           + N +G+ +   +T+ARDMAIL+  +  DFP     F I  ++       N N  +G + 
Sbjct: 151 WYNPNGLPEPRQWTSARDMAILARALMRDFPNQQALFSISAIQFGKSVMANHNGLLGRYP 210

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF-YNKTDR 270
           GADGMKTGF C+ GFN+VA+A +G + +IAV++G      R+  +A L   GF  +    
Sbjct: 211 GADGMKTGFICSGGFNVVATATRGGRRIIAVVMGQPSARERDIKAADLFDYGFGQSAGWT 270

Query: 271 KKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
                 +      +     P++   +C  +K 
Sbjct: 271 APTLESLPP----SNVAAPPDMRPYICDKRKP 298


>gi|170744628|ref|YP_001773283.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium sp.
           4-46]
 gi|168198902|gb|ACA20849.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium sp.
           4-46]
          Length = 506

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 93/233 (39%), Positives = 138/233 (59%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D ++G V+       PW PAS+TKLMT YV    +++ +A +   +TIS  A+  PP
Sbjct: 34  LVVDVDSGKVLYSQAATDPWYPASITKLMTTYVALDLVRQGRASMDQLLTISAEAAAEPP 93

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   F+ G+ +TLDNALK+++VKSAND+A AI E+L  +   F   MN T++ LG+  +H
Sbjct: 94  SKMGFRPGTQLTLDNALKIIMVKSANDVAWAIGENLGGSIDNFAALMNETAQRLGMRDSH 153

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           + N +G+     +T+ARDMAIL   +  DFP+    F I  ++       N N  +G + 
Sbjct: 154 WYNPNGLPDPRQWTSARDMAILGRALLRDFPENRDLFSISAIQFGRAVMANHNGLLGRYA 213

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
           G DGMKTGF CA GFN+VASA +  + +I V++G      R+  +A L   GF
Sbjct: 214 GVDGMKTGFICAGGFNVVASATRNGRRIITVVMGQPTARERDLKAADLFDYGF 266


>gi|229077103|ref|ZP_04209808.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-18]
 gi|228706203|gb|EEL58487.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-18]
          Length = 453

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 134/375 (35%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ ++G ++ E   D     
Sbjct: 23  KRFIAIVTVITLFCSIVVAFGRAAAETVSAIDVEAGSAILIEESSGKILYEKNADESLAI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 83  ASMTKMMSEYLVHEAMDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 142

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+NA G+           
Sbjct: 143 AMAIYSANGATIALVEEIAGKEVNFVKMMNDKSKEFGMKHYKFVNATGLTNQDLKGYHPE 202

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 203 GTTLDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQEGGKYPIDMANFNWMLKGL 262

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 263 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKANSHTARFDETKKLYDYGFAN 322

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +        
Sbjct: 323 FEVKKVYGKDAVVKGHETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVPNTEQ 382

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 383 EAPIKKGVTISKMII 397


>gi|229083326|ref|ZP_04215686.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-44]
 gi|228699973|gb|EEL52598.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-44]
          Length = 449

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 141/375 (37%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L         +       A         L++ ++G ++ +   D     
Sbjct: 17  KRFIAMVTVLTLFCSMFVTYSSASAETGPALDVAAGAAILVEADSGKILYQKNADELLAI 76

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + +S+ A +     S          + T+    +
Sbjct: 77  ASMTKMMSEYLVHKAVDQGKLKWDQKVKVSEYAYKVSQDRSLSNVPLENGGSYTVKELYE 136

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+AE++   E  FV+ MN+ +K  GL    F+N+ G+           
Sbjct: 137 AMAIYSANGATIALAEAVAGKEADFVKMMNDQAKEFGLKNYKFVNSTGLTNTDLKGLHPE 196

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD+AIL+ R+  DFP  +   +I     +       +  N NW     
Sbjct: 197 GTTPDEENKMSARDVAILAQRLMQDFPNVLDTAKIPKKVFQKDGKYPIQMDNWNWMLKGL 256

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           V  + G DG+KTG T  +G+    +A +    LI+V++      +R   +  +   GF N
Sbjct: 257 VKQYEGVDGLKTGHTPEAGYCFTGTAEKNGMRLISVVINTSSNTSRFDETKKIFDYGFAN 316

Query: 267 KTDRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K  +                   +      + +     +      + +     +  
Sbjct: 317 FDVKKVYSKGSAVKGHETVRVENAKDKDVTVQTKQAITLPMPKGSKDVYKTEFKDTSKEK 376

Query: 320 FIDFEKITLLKNKIT 334
               +K T L   + 
Sbjct: 377 EAPIKKGTTLGQMVI 391


>gi|158320769|ref|YP_001513276.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus oremlandii
           OhILAs]
 gi|158140968|gb|ABW19280.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus oremlandii
           OhILAs]
          Length = 442

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 89/359 (24%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F +I++ +  S +F           PY  L+D  TG V+          PAS TK+MTA
Sbjct: 12  IFTLILSFSFESMVFAQ-GQQPDISAPYGVLIDYETGTVLYNKNAHEKAYPASTTKVMTA 70

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +V          L   +TI         S+    KG + T+   L+ L+++SAND A A
Sbjct: 71  VMVLENA-----NLDDKVTI-DYDLYVDGSSMYLLKGESFTVRELLQALLIRSANDAAEA 124

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A  +  +   FV+ MN  +K LG   T+F N HG+    H TTA D+A++S    T   
Sbjct: 125 LAIHIAGSVDSFVEKMNARAKELGAFNTNFTNPHGLPDTNHVTTAYDLAMISKHAMTFDL 184

Query: 183 QYMHYFQI------KGLEIKGKKYPNTNWAVG-----------------TFLGADGMKTG 219
                              + + Y NTN  +                   +   DG+KTG
Sbjct: 185 FRETVKTEMLILEPTEQTPETRYYRNTNKFLWGTGSANHMLYNGSYINIKYDIIDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK- 278
           +T A+G  +++S+ Q D  LI+V+LGA   N     S  L+  G+ N       N+ +  
Sbjct: 245 YTGAAGNCLISSSFQNDHRLISVVLGAEG-NHVYSDSRRLIDYGYENFKLISLTNHNLDS 303

Query: 279 ---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                          +I  +  T       Y    +     E+     ++   L   I 
Sbjct: 304 IHIPIRNGAQDFVALSILNDKLTVVPLGTEYTNIKESLYLNENIQAPVKQGDTLGKLIY 362


>gi|188586281|ref|YP_001917826.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350968|gb|ACB85238.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 395

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 18/343 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            ++ +A++++       +  E   + P Y L +  +G ++ E        PAS+TK+MT 
Sbjct: 9   LVLFLAISLVFQGSTAKTSPEDELEAPVYLLGEPKSGEILLEQDKQEQVYPASITKIMTL 68

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +    L+ ++  L   + + + A + P +    ++G  +T+D+ +  + V SAND ++A
Sbjct: 69  LLTMEALENEQIALEEEVIVPREAEDIPGTTIFLQQGEKITVDDLITAIAVGSANDASIA 128

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL--------- 173
           IA+ +  T   FV  MN+ ++ LG+  T+F N HG+    H TTA D+ I+         
Sbjct: 129 IAKHISGTVDNFVDEMNDKARELGMKNTNFENPHGLHHDEHVTTAEDIFIMASELGKYEE 188

Query: 174 --SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
              W        ++   ++   + +G    NTN  V  + G DG KTGFT  S  +I A+
Sbjct: 189 IHDWLEIWLIEDFLQGKKVVEDDEEGIFLSNTNRLVNQYPGCDGFKTGFTEESKHSITAT 248

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSN 287
           A Q  +  IA+I+   D + R + + +LL  GF N      +            + +   
Sbjct: 249 AKQNGERYIAIIMSHEDSDGRFEEAMNLLDYGFANYQTNTILEKGDLVARVKINKGDQEY 308

Query: 288 EVPNISEEVCTTQKEIINYNTQM--KEAKDKESHFIDFEKITL 328
               + EE+    +E      +   +   D     ++ +K+  
Sbjct: 309 LPLLVKEELVAVTEESDEIEIEEEHQIPDDLSPPIVEGDKVGE 351


>gi|157691298|ref|YP_001485760.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
 gi|157680056|gb|ABV61200.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
          Length = 441

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 85/377 (22%), Positives = 149/377 (39%), Gaps = 43/377 (11%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++Q +V I+A+A++   F  +S                 L++ +TG ++     +     
Sbjct: 6   LKQLMVSILALALIVTAFTPMSKAKAAEDPFNVNAKAAILIEASTGKILYSKNAEQRLPI 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALK 109
           AS+ K+MT Y++   + E K            + + + +   SN   +K  + T+    +
Sbjct: 66  ASMAKMMTEYLLLEAIAEGKVKWDQTYTPDDYVYEISQDRSLSNVPLRKDGSYTVKELYQ 125

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
              + SAN  A+ +AE +  +E KFV+ MN  +K LGL+   F+NA G+           
Sbjct: 126 ATAIYSANAAAIGLAEVIAGSESKFVEKMNAKAKELGLTNYKFVNATGLENKDLHGKQPK 185

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA---- 206
                     +A+DMA+L+  +  D P+ +    I   + +         PN N+     
Sbjct: 186 GTGTDEESEVSAKDMALLAQHLIKDHPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGL 245

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGF 264
           V  + G DG+KTG T ++G +   +A QGD  +IAVIL A       R  V+  L    F
Sbjct: 246 VKEYEGVDGLKTGSTDSAGSSFTGTAKQGDMRVIAVILNAKGNLHTARFDVAKKLFDYAF 305

Query: 265 YNKTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
            N T ++      +          +           E      K     + + K   +K 
Sbjct: 306 KNFTMKEMYKKGQQIKGHENIEVDKGKDKEVPVVTKEAFSVPVKNGDEKSFKAKVNIEKT 365

Query: 318 SHFIDFEKITLLKNKIT 334
                 +K T +    T
Sbjct: 366 KLEAPIKKGTKVGMLTT 382


>gi|148553407|ref|YP_001260989.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingomonas wittichii
           RW1]
 gi|148498597|gb|ABQ66851.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingomonas wittichii
           RW1]
          Length = 392

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/351 (22%), Positives = 141/351 (40%), Gaps = 19/351 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +  L+     M +      +       P   L D ++G ++    PD    PAS+ K+MT
Sbjct: 5   KIALLSAVFLMAAIPAEAAAPPFDTPAPVAFLKDLSSGAILYAKNPDLRMPPASMAKMMT 64

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLIVKSA 116
            YV F  +++ +  L    T+     +        S      G  +++ N L  ++  S 
Sbjct: 65  VYVAFDLIQKGELKLDAMATVRPETWKQWHGPAAGSTMFLSPGEQVSVANLLFGIVTLSG 124

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH-YTTARDMAILSW 175
           ND  V +AE +  TE+ FV  MN  +K +GL+ +HF  ++G    G  Y TARD+A L+ 
Sbjct: 125 NDACVVLAEHISGTEQAFVALMNRRAKEMGLTNSHFGTSNGWPDGGATYVTARDLATLAE 184

Query: 176 RIKTDFPQYMH-YFQIKGLEIK-------GKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +   + P+    ++                    N +  +G   GADG+KTG T  +GF 
Sbjct: 185 KTIEEHPKLYKTFYSRPSFTWGKTMGGGQDITQANRDPLLGRVAGADGLKTGHTEEAGFG 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQ 283
              SA Q  + L+ V+ G    N R   S S ++ GF +   +  +    K    +    
Sbjct: 245 FTGSAEQNGRRLVMVLSGLTSFNQRIDQSVSFMNWGFRSWQSKPVVPKGRKVQTAEVQLG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +         +++  T    +  + + K    +      F+K   + + + 
Sbjct: 305 DEREVGLVAPKDLVVTVPAGLGSDLKTKVV-YQGPIKAPFKKGDHIADLVV 354


>gi|190893669|ref|YP_001980211.1| D-alanyl-D-alanine carboxypeptidase [Rhizobium etli CIAT 652]
 gi|190698948|gb|ACE93033.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CIAT
           652]
          Length = 366

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 122/319 (38%), Positives = 183/319 (57%), Gaps = 11/319 (3%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR  +F V    A L+++    +         + L+D  TG V+        W PASLTK
Sbjct: 1   MRPLRFSVAATAAFLASVSLAQANP-------HILVDVQTGRVLEHEEAFRKWYPASLTK 53

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMT Y VF  ++  +  L TPI +SK A+  P +   FK G  +TLD+ALK+L+VKSAND
Sbjct: 54  LMTVYTVFDAIRAGQISLDTPIVMSKRAAAQPAAKMYFKPGQKLTLDSALKILMVKSAND 113

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           IAVA+AE++  T++ FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++
Sbjct: 114 IAVAVAEAVGGTQEGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALR 173

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFPQY  YF ++G     +  PN N  +G F GADGMKTGF CASGFN + SA +  ++
Sbjct: 174 RDFPQYAGYFSLEGFTNGQQNVPNLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRT 233

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L++V+LG      R   +A+LL  GF  +         +K + Q     +V +I+ ++C+
Sbjct: 234 LVSVVLGTDSLAARADATANLLQKGFTTQFPGNDTLGSLKPYGQGQD--QVTDITADICS 291

Query: 299 TQKEIINYNTQMKEAKDKE 317
            +   I   T+ +  + K 
Sbjct: 292 AKGAKIRSETRDEVGRMKV 310


>gi|42779091|ref|NP_976338.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10987]
 gi|42735006|gb|AAS38946.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10987]
          Length = 438

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMFTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|15966442|ref|NP_386795.1| putative penicillin-binding protein [Sinorhizobium meliloti 1021]
 gi|307300521|ref|ZP_07580301.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
 gi|307318386|ref|ZP_07597821.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|15075713|emb|CAC47268.1| Putative penicillin-binding protein [Sinorhizobium meliloti 1021]
 gi|306896068|gb|EFN26819.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|306904687|gb|EFN35271.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
          Length = 360

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 118/305 (38%), Positives = 180/305 (59%), Gaps = 2/305 (0%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +      FL+ A         ++D +T  V         W PASLTKLMTAY  F  ++ 
Sbjct: 2   LAGACAVFLAAALPASANPRLVIDVDTLKVYEHQDIFQRWYPASLTKLMTAYTTFRAIQA 61

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L +P+ ++KNA+  PPS   +K G  MTLD+ALK++++KSAND+AVAIAE++  +E
Sbjct: 62  GQLTLQSPVVMTKNAASEPPSKMFYKPGQKMTLDSALKMMLIKSANDVAVAIAETVGGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + F++ MN  ++ +G++++HF+N +G+   G YTTARD+A+L+  +K +FPQY  YF ++
Sbjct: 122 QAFIEKMNAEARRIGMTSSHFINPNGLPGQGQYTTARDLAVLAVTLKREFPQYASYFALE 181

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           G     K YPN N  +G F GADGMKTGF CASGFN V+SA +G + +++V+LG      
Sbjct: 182 GFTTGKKDYPNYNMLIGRFDGADGMKTGFICASGFNQVSSASRGGRRVVSVVLGEDSLAA 241

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           R   SA LL M F   +  K     I  + +      V +IS+E+C+ Q   +    + +
Sbjct: 242 RADESARLLQMAFTTVSTGKPSLAEIVPYGE--TRGVVADISKEICSKQAAKVRSEGRDE 299

Query: 312 EAKDK 316
             + K
Sbjct: 300 AGRQK 304


>gi|255066778|ref|ZP_05318633.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria sicca ATCC
           29256]
 gi|255048853|gb|EET44317.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria sicca ATCC
           29256]
          Length = 417

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 6/307 (1%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           Y + D ++  V+A N  D    PASLTK+MTAY+ F  L+         +T+S    +  
Sbjct: 66  YIVTDLHSHQVLASNNIDTQIEPASLTKMMTAYLTFKALENGTLRADQMLTVSDAGWKIE 125

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLSA 149
            S          ++ + +K +IV+S ND A  +AE++   +   FVQ MN  +K LG++ 
Sbjct: 126 GSRMFLIPKVPASVSDLIKGMIVQSGNDAATTLAEAMGGGSVDVFVQQMNEEAKRLGMTK 185

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           THF N  G+   GH +T  D+AILS  +  D+P+Y   F IK  +    + PN N  +  
Sbjct: 186 THFKNPTGLAAEGHVSTVGDLAILSAALIHDYPKYYPVFSIKSFKYNNVEQPNRNLLLYR 245

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTG T ++G+N+ AS+ +  + ++++++G      R   S  LL+        
Sbjct: 246 DSNVDGLKTGHTESAGYNLAASSKRNGRRIVSIVVGTDSTEARASESGKLLNWALQAFDT 305

Query: 270 RKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            K  N          Y+ +  +      E+V  T       N +    +  +       K
Sbjct: 306 PKLYNGGEIISKVKVYKGSSKSVNVGFLEDVYITIPHDAGQNIKP-ILETVQPVIAPIRK 364

Query: 326 ITLLKNK 332
              L   
Sbjct: 365 GQTLGKL 371


>gi|171704678|gb|ACB54658.1| D-ala-D-ala carboxypeptidase [Paenibacillus polymyxa]
          Length = 417

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 37/349 (10%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
              +  L    L++ +TG V+    PD P  PAS+TK+MT Y+V   +K+ K   T  +T
Sbjct: 35  NPPSLALRSAILIEPSTGQVLLSMNPDEPLPPASMTKMMTEYIVAEQVKQGKLKWTDKVT 94

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++NAS+   S     +G   T++     + V SAND  VA+AE +  TE+ FV+ MN T
Sbjct: 95  VNENASKSIGSRIFLAQGDQHTVEELYIAMAVGSANDATVALAERVSGTEQDFVKLMNET 154

Query: 142 SKNLGLSATHFMNAHGVV------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++ +G+  T+F+N+ G+                   TARD A L+  I  D P Y  +  
Sbjct: 155 AQKMGMKNTYFINSTGLDRKDMPTGFQPDTDRETVMTARDAATLAGYIIKDHPDYTRFTT 214

Query: 190 IKGLEIKGK---KYPNTNWA-----------VGTFLGADGMKTGFTCASGFNIVASAIQG 235
           I+  + +        N NW               + G DGMKTG T  +G     +A + 
Sbjct: 215 IQSYKFRPTDKAPIINYNWMLEENKNITNFRKFAYPGLDGMKTGHTNNAGNCFTGTAERN 274

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
              LI+V++GA     R   +A +L+ GF N   ++ +         +N+         E
Sbjct: 275 GMRLISVVMGADSDAHRFTETAKVLNYGFDNFEVKQVVAPKTVVKGVENVP-VTKGTETE 333

Query: 296 VCTTQKEIINYNTQMKEAKDKE----------SHFIDFEKITLLKNKIT 334
           V    K+ +++      +  K           S     ++   +     
Sbjct: 334 VPIVTKDAVSFIVPKGASNPKVTFTTNITPASSLVAPLKQGAKVGTITY 382


>gi|167647108|ref|YP_001684771.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caulobacter sp. K31]
 gi|167349538|gb|ABZ72273.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caulobacter sp. K31]
          Length = 435

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 3/314 (0%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            + +   P+L +          ++D N+G ++ +   D P  PAS+TK+MT Y+ F  L 
Sbjct: 29  TVAAAQIPYLQLNSAEPKYAAIVIDANSGEMLYDKRADSPRYPASVTKVMTLYLTFEALS 88

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           E +  LT  +  +  A+   P+      G ++++D A++ + VKSAND+AVA+AE L  +
Sbjct: 89  EGRLKLTDRVPFTARAAAQAPTKLGLPPGDSISVDEAIRAMTVKSANDVAVAMAERLGGS 148

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E +F   M    + LG+  + F+NA G+      +TARD+AILS     DFPQY  YF I
Sbjct: 149 ESRFAALMTLRGQELGMRNSRFVNASGLPDSRQISTARDLAILSRATMRDFPQYYSYFSI 208

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           KG E +G+     N  +    G DG+KTG+T ASG+N+  SA++  + LIAV+LG     
Sbjct: 209 KGFEFRGRYIAGHNRLLTNMPGFDGLKTGYTNASGYNLAGSAVRDGRRLIAVVLGGSSTA 268

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            R+     LL+ GF     R                   P +     + + +      ++
Sbjct: 269 WRDNNMEDLLTTGFDVLKRRSHGERTTIAANLYEDEPTGPIMRP--SSEEGDGDQAGLKI 326

Query: 311 KEAKDKESHFIDFE 324
               +        +
Sbjct: 327 VLTDN-PKPPAPLK 339


>gi|170757721|ref|YP_001781407.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum B1 str.
           Okra]
 gi|169122933|gb|ACA46769.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum B1
           str. Okra]
          Length = 407

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 155/378 (41%), Gaps = 44/378 (11%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIA-----------------------ETNKLPYYT 32
           M++     F VII +  +  +F     A                                
Sbjct: 1   MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKKEEKAEDKDSNKEGDSDVDAKSAL 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L++  TG VI E  P   + PAS+TK+MT  +    +   K  LT  +TIS+NA +   S
Sbjct: 61  LIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                 G   T+++ LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ L +  T F
Sbjct: 121 TMLLDVGEERTVEDLLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQKLNMKDTSF 180

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            N  G+   GH T+A D++I+S  +            +   I           N N  V 
Sbjct: 181 KNCTGLSAEGHKTSAYDISIMSRELLKHKQILKYTGTYMETISEGRKSPIGLVNHNKLVR 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L++ GF    
Sbjct: 241 FFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLMNYGFSKFE 300

Query: 269 DRKKINYII----KDFYQQNLSNEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            +  +             +     +       +V   + +      +    ++K+ + I 
Sbjct: 301 CKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDVIIEKGKKTKITNKCIIDENKKEYKI- 359

Query: 323 FEKITL-----LKNKITK 335
            E++ +       N I K
Sbjct: 360 NEEVGICEFYSDGNLIGK 377


>gi|295116100|emb|CBL36947.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SM4/1]
          Length = 404

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 14/337 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S            + P   L++ +TG V+ E   D   NPAS+TK+MT  + F  LK  
Sbjct: 33  VSAPASAALEGPQIQAPCGILMEASTGTVLYEKNADEARNPASVTKIMTLLLTFDALKSG 92

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K  LT  +  S +A     S    ++G   T++  +K +++ S ND +VA+AE +   E 
Sbjct: 93  KIALTDEVVTSAHAKSMGGSQVFLEEGEVQTVETLIKCIVIASGNDASVAMAEYIAGDEA 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
            FVQ MN  +K LG+   +F +  G+     H  +ARD+A+++  + T +P+  +Y  I 
Sbjct: 153 SFVQMMNERAKGLGMEQANFEDCCGLTDSASHAMSARDIALMTRELITKYPEIFNYSTIW 212

Query: 192 GLEIKGKK--------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              I              NTN    + T     G+KTG T  + + + A+A +    LIA
Sbjct: 213 MENITHVTKQGTKKFGLSNTNKLLKMATNFEVTGLKTGSTSTAKYCLSATARKDGVELIA 272

Query: 242 VILGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           VIL A D   R   + +LL+ G+ N    TD                      I +    
Sbjct: 273 VILAAPDYKARFNDAVTLLNYGYANCRLYTDEDVGEIPEVQILGGVQDTVPVRIDKPFSY 332

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                 +++   KE   +       ++  ++   + +
Sbjct: 333 LGTSGEDFSGIEKEWIFETELKAPVQEGEIVGKLVYR 369


>gi|228963111|ref|ZP_04124282.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228796567|gb|EEM44004.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 443

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTVITLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EVKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|147678211|ref|YP_001212426.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
 gi|146274308|dbj|BAF60057.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
          Length = 407

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/329 (24%), Positives = 133/329 (40%), Gaps = 19/329 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S      S           ++D   G V+ E  PD    PAS TK+MTA +     +  
Sbjct: 18  ASASPLQASSGPEIVGEAAVVIDIKNGQVLFEKNPDRRVYPASTTKIMTAVIALENGR-- 75

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   + +   A     S+   ++G  ++L++ L  L++ S ND AVAIA  +  + +
Sbjct: 76  ---LDAAVAVPGEACNIEGSSIGLQEGEKISLEDLLYALMLNSGNDTAVAIACHVGGSVE 132

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  MN  +  LG   THF N +G+   GHY+TA DMA++S       P++      + 
Sbjct: 133 AFVSMMNKKAAELGAVNTHFNNPNGLPDPGHYSTAYDMALISRY-AMQNPEFRKIVSTRV 191

Query: 193 LEIK------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
             I+           N N  +  + GA G+KTG+T  +G  +V+SA +  + L+AV++ +
Sbjct: 192 KTIRRSVPDAQVYLENHNRLLWLYEGATGVKTGYTVEAGQCLVSSAARQGRELLAVVMKS 251

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQ 300
              N     S SL+   F        +            F +          S       
Sbjct: 252 EGSNI-WSDSTSLMDYCFKEFRPVCLVEAGAFVADVPVKFGEPAAVAVQTGSSFTYNFPA 310

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLL 329
            + +    ++   K+  +     EK+  +
Sbjct: 311 DKPLEIKKEVLLEKEFCAPVRAGEKLGEM 339


>gi|86359415|ref|YP_471307.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
 gi|86283517|gb|ABC92580.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
          Length = 360

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 117/306 (38%), Positives = 178/306 (58%), Gaps = 2/306 (0%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M++    F++     +   + L++  TG V+        W PASLTKLMT Y VF  ++ 
Sbjct: 1   MIAATAAFVASVSLVQANPHILVEVQTGRVLEHEEAFRKWYPASLTKLMTVYTVFDAIRA 60

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L TPI ISK A+  P +   FK G  +TLD+ALK+L+VKSANDIAVA+AE++  T+
Sbjct: 61  GQISLDTPIVISKRAAAQPAAKMYFKPGQKLTLDSALKILMVKSANDIAVAVAEAVGGTQ 120

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++ DFPQY  YF ++
Sbjct: 121 EGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRDFPQYASYFALE 180

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           G     +  PN N  +G F GADGMKTGF CASGFN + SA +  ++L++V+LG      
Sbjct: 181 GFTTGQQNVPNLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRTLVSVVLGTDSLAA 240

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           R   +A+LL  GF  +         +K +       +V +I+ ++C+ +   I   T+ +
Sbjct: 241 RADATANLLQKGFTTQFPGSDTLGSLKPYGPGQD--QVTDITADICSAKGAKIRSETRDE 298

Query: 312 EAKDKE 317
             + K 
Sbjct: 299 VGRMKV 304


>gi|229009524|ref|ZP_04166753.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides DSM 2048]
 gi|228751735|gb|EEM01532.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides DSM 2048]
          Length = 418

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/355 (20%), Positives = 135/355 (38%), Gaps = 34/355 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 6   SNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVNEAIAKGK 65

Query: 74  AMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 + +S+ A       S          + T+    + + + SAN   +A+AE++  
Sbjct: 66  LKWDQKVKVSEYAYNISQDRSLSNVPLRNGESYTVKELYEAMAIYSANGATIALAEAVAG 125

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSW 175
            E  FV+ MN+ SK LGL    F+N+ G+                  +  +ARD+AIL+ 
Sbjct: 126 KEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGHHPEGTTPDEENKMSARDVAILAQ 185

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTCASGF 226
           R+  DFP+ +   +I     +         PN NW     +  + G DG+KTG T  +G 
Sbjct: 186 RLIQDFPKTLDIAKISKKVFREGTPDRIEMPNWNWMLKGLIKEYEGVDGLKTGSTPEAGD 245

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
               +  +     I+V++       R   +  L   GF N   +K          ++ + 
Sbjct: 246 CFTGTIERNGMRFISVVIKTKSHTARFDETKKLYDYGFANFEMKKMYEKGSSVKGKETVR 305

Query: 287 NEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            E            + V     +      + +  +  +      +K   L   + 
Sbjct: 306 VENAKDKDVAVQTKQAVSLPVPKGSKDVYKTEFKEGNKGQEAPMKKGVTLGQMVV 360


>gi|218895150|ref|YP_002443561.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           G9842]
 gi|218543092|gb|ACK95486.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           G9842]
          Length = 438

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTVITLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EVKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|90418359|ref|ZP_01226271.1| putative penicillin-binding protein, D-Ala-D-Ala carboxypeptidase
           family [Aurantimonas manganoxydans SI85-9A1]
 gi|90338031|gb|EAS51682.1| putative penicillin-binding protein, D-Ala-D-Ala carboxypeptidase
           family [Aurantimonas manganoxydans SI85-9A1]
          Length = 393

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 10/314 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L+D  TG V+ E   D    PASL KLMT  V+F  LK+ +        +S+
Sbjct: 35  ETTAPTAILVDYGTGRVLYEKDADTEIPPASLAKLMTIAVLFDDLKQGRVQRDDRFVVSE 94

Query: 85  NASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +A     ++           S + +++ ++ +IV+S ND  + +AE L  + + F   MN
Sbjct: 95  HAWRTGGASSGGSTMFLPLNSEVAVEDLIRGIIVQSGNDATIVVAEGLSGSVEAFAGRMN 154

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ +GL+ +HF N HG+     + + RD+A L+  +  +FP+    F  +     G K
Sbjct: 155 AEAEKIGLTHSHFTNPHGLPDPEQHVSVRDLARLATYLIREFPEDYPIFAEESFTYNGIK 214

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N      LGADG+KTG T A+G+ +VASA +  + ++  + G      R   +  L
Sbjct: 215 QQNRNPL--LDLGADGLKTGHTSAAGYGLVASAERDGRRIVLAMSGMGSTAERASEARRL 272

Query: 260 LSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           ++ G  +  +   +           +  +S  V   + E         +     +E  + 
Sbjct: 273 MNFGLQDFEEVVLVTAGETLGNVQVRGGVSETVGMAAAEDLRMLVPRGSLADVEREVVEN 332

Query: 317 ESHFIDFEKITLLK 330
                   K   L 
Sbjct: 333 GPFVAPVAKGQRLG 346


>gi|209548202|ref|YP_002280119.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209533958|gb|ACI53893.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 427

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 154/323 (47%), Gaps = 8/323 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR  L  +    L+   P  ++A         +LD  TG V+A    D   +PASLTK+M
Sbjct: 1   MRTLLAAVLTVTLAVSAPLAALA----GSASLVLDARTGKVLAAENADTLNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  LK  K    TPI +SK A+  PP+    K G T+T+  A+  +I+KSAND A
Sbjct: 57  TLYLTFEALKRGKIAWDTPIKMSKYAASRPPTKLGVKAGGTITVREAVYGMIIKSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E  F + M   ++ LG+S T F+NA G+      TTARDM+ L+  +  +
Sbjct: 117 SAMGEKLGGSESGFARMMTAKARQLGMSRTVFVNASGLPDGRQVTTARDMSTLAIALMKN 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P     F +     +G+     N  +  + G DG+KTG+T ASGFN+V++   G++ ++
Sbjct: 177 YPNEYRLFSVASFNFRGRTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVV 236

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTD----RKKINYIIKDFYQQNLSNEVPNISEEV 296
            V+LG     +R+   A LL       +     R   +   ++  +   + +  ++   +
Sbjct: 237 GVVLGGRTARSRDDKMAGLLDRYLGRASSSGGARLVASVGAREPVEVASAADDSDVPVPL 296

Query: 297 CTTQKEIINYNTQMKEAKDKESH 319
              +         +  A D    
Sbjct: 297 SAPRPADDLAAKSLAYADDAVVP 319


>gi|254436605|ref|ZP_05050099.1| D-alanyl-D-alanine carboxypeptidase family [Octadecabacter
           antarcticus 307]
 gi|198252051|gb|EDY76365.1| D-alanyl-D-alanine carboxypeptidase family [Octadecabacter
           antarcticus 307]
          Length = 399

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 13/330 (3%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEK 72
           P  +     +     +LD +TG V+ E   D P  PAS++KLMT Y+ F  +     ++ 
Sbjct: 21  PVSAQTFDTRAGAAYVLDHSTGIVLLEKNADDPLPPASMSKLMTLYMAFEAVNPLNGQDP 80

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT-- 130
                  + +S++  +Y  S         + +++ ++ +IV S ND +  IAE+L +   
Sbjct: 81  ILTFDDVLPVSQHCMDYTGSTMFLDTTDRVRVEDLVRGIIVLSGNDASCVIAEALSRDGT 140

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E  F Q M   ++ +G+  + F N++G    G+  T RD+  L+ R+ TD+P Y   F  
Sbjct: 141 EAGFAQQMTERAQQIGMMNSSFANSNGWPAAGNRVTMRDLGTLADRLITDYPTYYPLFAE 200

Query: 191 KGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           +  +  G+      N N  +   +GADG+KTG T  +GF +V SA QGD+ +I V+ G  
Sbjct: 201 REFDYDGEHLANIRNRNPLLALNIGADGLKTGHTREAGFGLVGSAKQGDRRIIFVVTGIE 260

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               R   +  +++  F   T R       +    +    E P +   +      ++  +
Sbjct: 261 TAQERAAETERIVNWAFRQFTQRDIARGGTQIAQAEVWRGEQPVVGLLLQEDLSLLVPTS 320

Query: 308 TQMKEAKDKE---SHFIDFEKITLLKNKIT 334
              + + +            +   +   + 
Sbjct: 321 GSREISAEVVYTGPIQAPIVQGDAIAELVI 350


>gi|228956454|ref|ZP_04118252.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|229039918|ref|ZP_04189684.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH676]
 gi|229107699|ref|ZP_04237337.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-15]
 gi|229125530|ref|ZP_04254564.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-Cer4]
 gi|229142819|ref|ZP_04271263.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST24]
 gi|229148422|ref|ZP_04276680.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus m1550]
 gi|296500847|ref|YP_003662547.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|228635031|gb|EEK91602.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus m1550]
 gi|228640633|gb|EEK97019.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST24]
 gi|228657914|gb|EEL13718.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-Cer4]
 gi|228675739|gb|EEL30945.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-15]
 gi|228727408|gb|EEL78599.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH676]
 gi|228803211|gb|EEM50031.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|296321899|gb|ADH04827.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 415

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 33/354 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 4   SNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHEAVDKGK 63

Query: 74  AMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 I +S+ A +        N   + G + T+    + + + SAN   +A+AE++  
Sbjct: 64  LKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAG 123

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSW 175
            E  FV+ MN+ SK LGL    F+N+ G+                  +  +A+D+A L+ 
Sbjct: 124 KEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQ 183

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----VGTFLGADGMKTGFTCASGFN 227
            +  D+P+ +   +I   E + +K      N NW     V  + G DG+KTG T  +G  
Sbjct: 184 HLIKDYPKVLDTAKIPKKEFRPEKEKFGMSNWNWMLKGLVKEYDGVDGLKTGSTPEAGDC 243

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  +     I+V++       R   +  L   GF N   ++          Q+ +  
Sbjct: 244 FTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEVKQMYKKGSSVKGQETVRV 303

Query: 288 EVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           E            + +     +      + +  +  +      +K   L   + 
Sbjct: 304 ENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQEAPIKKGAALGQMVI 357


>gi|239625716|ref|ZP_04668747.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519946|gb|EEQ59812.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 392

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/332 (26%), Positives = 140/332 (42%), Gaps = 14/332 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                   A     P   L++ +TG VI E   D   +PAS+TK+MT  ++F  L+  K 
Sbjct: 21  APSADTQAAVQIAAPSAVLMEASTGQVIYEKGADEKRSPASVTKVMTLILIFDALQSGKI 80

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            LT  +  S +A     S    ++G   T++  +K +++ S ND +VA+AE +  TE++F
Sbjct: 81  NLTDEVVTSAHAKSMGGSQVFLEEGEKQTVETLIKCIVIASGNDASVAMAEYIGGTEEEF 140

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           V+ MN  +  LG++ THF++  G+     H TTARD+AI+S  +   +PQ  +Y  I   
Sbjct: 141 VRMMNERAAGLGMTNTHFVDCCGLTESPEHLTTARDIAIMSRELINKYPQIHNYSTIWME 200

Query: 194 EIKGKK--------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            I              NTN    + T     G+KTG T  + + + A+A +    LIA I
Sbjct: 201 NITHVTKQGTKEFGLSNTNKLLKMATNFKVTGLKTGSTSIAKYCLSATAEKDGVRLIATI 260

Query: 244 LGALDRNTRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           + A D   R   + +LL+ G+ N     D++ +                           
Sbjct: 261 MAAPDFKARFGDAQTLLNYGYANCKLYEDKEHVPLPQMPVTGGVEDEVGLAYEGVFSYLS 320

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  +     K     ES     E        
Sbjct: 321 LKGEDLGAIEKNLVLAESMPAPVEPGQKAGVL 352


>gi|260587845|ref|ZP_05853758.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|331083847|ref|ZP_08332956.1| hypothetical protein HMPREF0992_01880 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542110|gb|EEX22679.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|330403272|gb|EGG82832.1| hypothetical protein HMPREF0992_01880 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 393

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/345 (25%), Positives = 156/345 (45%), Gaps = 15/345 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           + +V I +     + P    AE       P+  L++ +TG +I E   D    PAS+TK+
Sbjct: 8   KIVVGILLFCSLFLTPLTVKAENEELITAPHGVLMEASTGKIIYEKDMDTRVKPASITKI 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT  ++F  L++    +   +  S  A     S    ++G   T++  +K +++ S ND 
Sbjct: 68  MTLILIFDELEKGNLHMEDEVVTSAYAKSMGGSQVFLEEGEKQTVETLIKCIVIASGNDA 127

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIK 178
           + A+AE +  +E +FV+ MN  +K LG+  T+F +  G+     HYT+A D+AI+S  + 
Sbjct: 128 SAAMAEHIAGSETEFVKRMNERAKGLGMENTNFEDCCGLTESDNHYTSAHDVAIMSRELI 187

Query: 179 TDFPQYMHYFQIKGLEIKGKKY--------PNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           T +P+ + Y  +    I              NTN  + ++ G  G+KTG T  + + + A
Sbjct: 188 TRYPKILEYSSVWMENITHVTQKGNSEFGLTNTNKLIRSYDGCVGLKTGSTSVAKYCVSA 247

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF---YNKTDRKKINYIIKDFYQQNLSN 287
            A +   +LI+V++ A D   R K +A++L++GF       D +K            L  
Sbjct: 248 VAQREGITLISVVMTAPDYKVRFKDAAAMLNLGFGSCKLYVDEQKEKLPQIPVEGGVLEK 307

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 +E      E  ++    K+ K K+      +K   +   
Sbjct: 308 VPCAYEKEFRYLDTEGASFENIEKKIKLKKDLKAPVKKGDTVGTV 352


>gi|168184531|ref|ZP_02619195.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|237795263|ref|YP_002862815.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Ba4
           str. 657]
 gi|182672360|gb|EDT84321.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|229263748|gb|ACQ54781.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Ba4
           str. 657]
          Length = 407

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 139/325 (42%), Gaps = 14/325 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  TG VI E  P   + PAS+TK+MT  +    +   K  LT  +TIS+
Sbjct: 53  DVDAKSALLIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISE 112

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA +   S      G   T++  LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ 
Sbjct: 113 NAKKMGGSTMLLDVGEERTVEELLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQK 172

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKY 200
           L +  T F N  G+   GH T+A D+AI+S  +            +   I          
Sbjct: 173 LNMKDTSFKNCTGLSAEGHKTSAYDIAIMSRELLKHKQILKYTGTYMETISEGRKSPIGL 232

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  V  F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L+
Sbjct: 233 VNHNKLVRFFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLM 292

Query: 261 SMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK----- 311
           + GF     +  +             +     +    EE+    ++        K     
Sbjct: 293 NYGFSKFECKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKAKITNKCIIDE 352

Query: 312 -EAKDKESHFIDFEKITLLKNKITK 335
            + + K +  +   +     N I K
Sbjct: 353 NKKEYKINEEVGICEFYSDGNLIGK 377


>gi|229136857|ref|ZP_04265486.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST26]
 gi|228646592|gb|EEL02797.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST26]
          Length = 443

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|229119057|ref|ZP_04248397.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-3]
 gi|228664386|gb|EEL19887.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-3]
          Length = 453

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 23  KRFIAIVTVLALFCSIVVTSGRASAETVPAIDVEAGSAILIEANSGKILYQKNADESLAI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 83  ASMTKMMSEYLVHEAVAKGKIKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 142

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 143 AMAIYSANGATIALVEEIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHPE 202

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFPQ ++  +I     +          N NW     
Sbjct: 203 GTTLDEKNKMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 262

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 263 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 322

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                       + V    + V     +  N   + +     +  
Sbjct: 323 FEVKNVYGKDAVVKGHETVRVANAKDKDVVVQTKQAVALPMPKGNNDVYKKEFKVSNKEQ 382

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 383 EAPIKKGVTISKMII 397


>gi|206978355|ref|ZP_03239229.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           H3081.97]
 gi|217957590|ref|YP_002336132.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           AH187]
 gi|206743447|gb|EDZ54880.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           H3081.97]
 gi|217065585|gb|ACJ79835.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus cereus
           AH187]
 gi|324324003|gb|ADY19263.1| serine-type D-Ala-D-Ala carboxypeptidase DacA [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 438

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 7   KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+           
Sbjct: 127 AMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPE 186

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 187 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 246

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 247 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 306

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 307 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 366

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 367 APIKKGAALGQMVI 380


>gi|42781590|ref|NP_978837.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10987]
 gi|42737513|gb|AAS41445.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10987]
          Length = 434

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/375 (18%), Positives = 134/375 (35%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+VI+ +  L         +           +     L++ N+G ++ E   D     
Sbjct: 4   KKFIVIVTVLTLFCSIVVTSGSASAETVPVLDVEAGSAILVEANSGKILYEKNADESLAI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   +++ K      + IS+ A       S          + T+    +
Sbjct: 64  ASMTKMMSEYLVHEAVEKGKLKWDQKVKISEYAYTISQDRSLSNVPLENSGSYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 124 AMAIYSANGATIALVEEIAGKEADFVKMMNDKSKEFGMKNYKFVNSTGLTNYDLKGHHPE 183

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N N      
Sbjct: 184 GTTPDEKNKMSARDCAILAQRLVQDFPKMLDTAKIPKKTFQKGGKYPIDMVNFNMMLKGL 243

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 244 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKANSHTARFDETKKLYDYGFAN 303

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                       + +    + +     +      + +     E  
Sbjct: 304 FEVKNIYGKGSVVKGHETVRVANAKDKDVIVQTKQAISLPMPKGNKDVYKKEFKVSNEEQ 363

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   + 
Sbjct: 364 EAPIKKGVTISKMVI 378


>gi|317122120|ref|YP_004102123.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
 gi|315592100|gb|ADU51396.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
          Length = 578

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 81/327 (24%), Positives = 128/327 (39%), Gaps = 15/327 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P              L+D  TG V+ E   D     AS TK+MTA +        +  L 
Sbjct: 174 PVPDRPPPQDARAAILVDAATGQVLYERNADATMPMASTTKIMTALLAIE-----RGDLR 228

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             IT S+ A     S+     G   TL+  L  L+++S ND AVAIAE L  + + FV  
Sbjct: 229 QVITTSERAFGVEGSSLYLALGEQRTLEELLYGLMLQSGNDAAVAIAEGLAGSVETFVDW 288

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY-----MHYFQIKG 192
           MN  ++ LGL  T F + HG+    HYT+ARD+A L+     +           Y     
Sbjct: 289 MNRRAQELGLEHTRFADPHGLASRDHYTSARDLATLARVAMANPTFRRIVGTREYRMPWP 348

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            +   +   N N  +  + GA G+K G+T A+   +VASA +    LI V+LGA      
Sbjct: 349 EKQSERVLYNHNRFLWRYEGATGVKNGYTSAARGALVASAQRDGVELIGVLLGAH-PTGM 407

Query: 253 NKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
            +  A+L+  GF      + +       +        + V  ++                
Sbjct: 408 YRDMAALMDWGFARFAPVELVRAGETVGEVAVTGGRQDRVAVVAAYGLRWLVPRDEPAPP 467

Query: 310 MKEAKDKE-SHFIDFEKITLLKNKITK 335
           ++   + E +      +       + +
Sbjct: 468 VRRTVEPEGALPAPVARGARAGTLVIR 494


>gi|288957533|ref|YP_003447874.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
 gi|288909841|dbj|BAI71330.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
          Length = 474

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 84/233 (36%), Positives = 129/233 (55%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  TG V+ +   D   +PASLTK+MT Y+ F  L++ +  L   + +S  A    P
Sbjct: 88  IVVDARTGQVLIDQDADAITHPASLTKMMTLYLTFDALEDGRLTLDQQLPVSSWAESMSP 147

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +    + G T+ ++ A+  L+ KSAND AV +AE+L  TE +F + M   ++ LG+  T 
Sbjct: 148 TKLGLRAGQTLKVETAILGLVTKSANDAAVVLAEALGGTESRFAEMMTRKARELGMRHTV 207

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           + NA G+      TTARD A LS  +  D  +Y  YF  +     G+  PN N  +  + 
Sbjct: 208 YRNASGLPNMEQVTTARDYAALSRALMRDHAKYYPYFSRRNFVYGGRTLPNHNRLMSRYE 267

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
           G DG+KTG+T ASGFN+ ASA++  + L+ V+LG     +R+   A+LL   F
Sbjct: 268 GMDGIKTGYTVASGFNLAASAVRDGRRLVGVVLGGKSAVSRDNKMAALLDQAF 320


>gi|168180436|ref|ZP_02615100.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum NCTC
           2916]
 gi|226949102|ref|YP_002804193.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum A2
           str. Kyoto]
 gi|182668867|gb|EDT80845.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum NCTC
           2916]
 gi|226842614|gb|ACO85280.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum A2
           str. Kyoto]
          Length = 407

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 151/377 (40%), Gaps = 42/377 (11%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIA-----------------------ETNKLPYYT 32
           M++     F VII +  +  +F     A                                
Sbjct: 1   MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKKEEKAEDKDSNKEGDSDVDAKSAL 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L++  TG VI E  P   + PAS+TK+MT  +    +   K  LT  +TIS+NA +   S
Sbjct: 61  LIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                 G   T++  LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ L +  T F
Sbjct: 121 TMLLDVGEERTVEELLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQKLNMKDTSF 180

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            N  G+   GH T+A D+AI+S  +            +   I           N N  V 
Sbjct: 181 KNCTGLSAEGHKTSAYDIAIMSRELLKHKQILKYTGTYMETISEGRKSPIGLVNHNKLVR 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L++ GF    
Sbjct: 241 FFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLMNYGFSKFE 300

Query: 269 DRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKES 318
            +  +             +     +    EE+    ++        K      + + K +
Sbjct: 301 CKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKAKITNKCIIDENKKEYKIN 360

Query: 319 HFIDFEKITLLKNKITK 335
             +   +     N I K
Sbjct: 361 EEVGICEFYSDGNLIGK 377


>gi|228937316|ref|ZP_04099964.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228950561|ref|ZP_04112697.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|228970202|ref|ZP_04130863.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228976772|ref|ZP_04137186.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis Bt407]
 gi|229067777|ref|ZP_04201096.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus F65185]
 gi|229077286|ref|ZP_04209969.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-2]
 gi|229188298|ref|ZP_04315349.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus ATCC 10876]
 gi|228595166|gb|EEK52934.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus ATCC 10876]
 gi|228706009|gb|EEL58314.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-2]
 gi|228715330|gb|EEL67187.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus F65185]
 gi|228782934|gb|EEM31098.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis Bt407]
 gi|228789503|gb|EEM37421.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228809104|gb|EEM55587.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|228822341|gb|EEM68321.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|326937806|gb|AEA13702.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 415

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 33/354 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 4   SNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHEAVDKGK 63

Query: 74  AMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 I +S+ A +        N   + G + T+    + + + SAN   +A+AE++  
Sbjct: 64  LKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAG 123

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSW 175
            E  FV+ MN+ SK LGL    F+N+ G+                  +  +A+D+A L+ 
Sbjct: 124 KEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQ 183

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----VGTFLGADGMKTGFTCASGFN 227
            +  D+P+ +   +I   E + +K      N NW     V  + G DG+KTG T  +G  
Sbjct: 184 HLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLVKEYDGVDGLKTGSTPEAGDC 243

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  +     I+V++       R   +  L   GF N   ++          Q+ +  
Sbjct: 244 FTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEVKQMYKKGSSVKGQETVRV 303

Query: 288 EVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           E            + +     +      + +  +  +      +K   L   + 
Sbjct: 304 ENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQEAPIKKGAALGQMVI 357


>gi|228983269|ref|ZP_04143484.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229153793|ref|ZP_04281925.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus ATCC 4342]
 gi|229194404|ref|ZP_04321209.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus m1293]
 gi|228589060|gb|EEK47073.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus m1293]
 gi|228629662|gb|EEK86357.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus ATCC 4342]
 gi|228776449|gb|EEM24800.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 443

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 146/374 (39%), Gaps = 41/374 (10%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ M  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTMLTLACSMLLPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALK 109
           AS+TK+M+ Y+V   + + K      I +S+ A +        N   + G + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------- 159
            + + SAN   +A+AE++   E  FV+ MNN SK LGL    F+N+ G+           
Sbjct: 132 AMAIFSANGATIALAEAIAGKEVDFVKMMNNKSKELGLKNYKFVNSTGLTNKDLKGMHPE 191

Query: 160 ----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----V 207
                  +  +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V
Sbjct: 192 GTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLV 251

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + G DG+KTG T  +G     +  +     I+V++       R   +  L   GF N 
Sbjct: 252 KEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANF 311

Query: 268 TDRKKINYIIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++          Q+ +  E            + +     +      + +  +  +   
Sbjct: 312 EMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQE 371

Query: 321 IDFEKITLLKNKIT 334
              +K   L   + 
Sbjct: 372 APIKKGAALGQMVI 385


>gi|283851675|ref|ZP_06368954.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio sp.
           FW1012B]
 gi|283573005|gb|EFC20986.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio sp.
           FW1012B]
          Length = 362

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/253 (33%), Positives = 136/253 (53%), Gaps = 1/253 (0%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
               +    L + +TG ++ E  PD    PASLTK++T Y++F  +++ K      + +S
Sbjct: 93  PALTVKSAMLWNASTGELLYEQNPDFQIPPASLTKILTLYIIFDAIRQGKLRPWDVVDVS 152

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTS 142
           + A+    S    + G ++ + + +K + V SAND  +A+A+ L       FV  MN+T+
Sbjct: 153 ERAATQGGSTMRLRNGESVKVTDMIKGIAVASANDACMAMADYLEGGNVDAFVALMNDTA 212

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           K LG+S + FMN +G+   G  TTARDM  L+      FP+ +    ++      ++  N
Sbjct: 213 KRLGMSNSVFMNPNGLPAEGQLTTARDMLRLASAYLEQFPKALSIHSLQFFSHNNRQRHN 272

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  + ++ G DG+KTGF CASG+NIVA+A +GD  LIAV+LG+     R + +A LL  
Sbjct: 273 ANSLLASYEGCDGLKTGFVCASGYNIVATAKRGDTRLIAVVLGSRSPRVRQRETAKLLDK 332

Query: 263 GFYNKTDRKKINY 275
           GF     RK    
Sbjct: 333 GFKLAAIRKATTP 345


>gi|229170684|ref|ZP_04298327.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH621]
 gi|228612787|gb|EEK69969.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH621]
          Length = 442

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/378 (20%), Positives = 144/378 (38%), Gaps = 43/378 (11%)

Query: 2   RQFLVI-----IAMAMLSNIFPFLS---IAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I     +  +M+       +    A   +     L++ N+G ++ +   D     
Sbjct: 12  KRFIAIGTVLTLFCSMVVTSGSASAETVPALDVEAGSAILVEANSGKILYQKNADELLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQKGGKYPIDMTNFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKASSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +     +  
Sbjct: 312 FEVKKVYEKDSVVKGHETVRVANAKDKDVVVQAKQAVSLPMPKGNKDVYKKEFKVSNKEQ 371

Query: 320 FIDFEK-ITLLKNKITKK 336
               +K +T+ K  I+ K
Sbjct: 372 EAPIKKDVTISKMTISPK 389


>gi|229176613|ref|ZP_04304020.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus 172560W]
 gi|228606860|gb|EEK64274.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus 172560W]
          Length = 415

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 33/354 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 4   SNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHEAVDKGK 63

Query: 74  AMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 I +S+ A +        N   + G + T+    + + + SAN   +A+AE++  
Sbjct: 64  LKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAG 123

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSW 175
            E  FV+ MN+ SK LGL    F+N+ G+                  +  +A+D+A L+ 
Sbjct: 124 KEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQ 183

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----VGTFLGADGMKTGFTCASGFN 227
            +  D+P+ +   +I   E + +K      N NW     V  + G DG+KTG T  +G  
Sbjct: 184 HLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLVKEYDGVDGLKTGSTPEAGDC 243

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  +     I+V++       R   +  L   GF N   ++          Q+ +  
Sbjct: 244 FTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEVKQMYKKGSSVKGQETVRV 303

Query: 288 EVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           E            + +     +      + +  +  +      +K   L   + 
Sbjct: 304 ENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQEAPIKKGATLGQMVI 357


>gi|260575562|ref|ZP_05843560.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sp. SW2]
 gi|259022205|gb|EEW25503.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sp. SW2]
          Length = 385

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/335 (21%), Positives = 138/335 (41%), Gaps = 9/335 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            M  L+ +    + A   +     + D  T  V+ +   D    PAS++KLMT  ++F  
Sbjct: 5   LMLFLALLTALPAQAFDTQASNAWVYDLTTHTVLMDKNADVAVPPASMSKLMTINMLFEA 64

Query: 69  LKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           L++ +  + T   +S  A        S    ++    T++  +  +I+ S ND  V +AE
Sbjct: 65  LRDGRVAMDTTFAVSTRAKGMTALGGSTMFLQETDRPTVEQLIHGMIINSGNDACVVVAE 124

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            L  +E+ F + M+  ++ LG++ +HF NA G+    H  +  D+ +L+ R+  +FP+Y 
Sbjct: 125 GLAGSEEAFAEQMSQRAQALGMTNSHFANASGMPDPSHRMSMHDLGLLATRLIEEFPEYY 184

Query: 186 HYFQIKGLEIKGKKYP---NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             F         +      N N  +   +GADG+KTG T  +G+ +V SA+QG++ ++  
Sbjct: 185 PVFAETEYNYADRAVENRFNRNPLLKLNIGADGLKTGHTTEAGYGLVGSAVQGNRRIVFA 244

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTT 299
           I G      R + S  +++  F     +      +   +       +  V  +     T 
Sbjct: 245 ITGLPSETARAEESERIVNWAFRQFALKTVAKSGVRVAEAEVWLGDAATVGLVPAADVTR 304

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               +  +    E            K   +   + 
Sbjct: 305 LLPALVQDQMSAEVVYTGPLQAPIAKGDEVAELVL 339


>gi|261364923|ref|ZP_05977806.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria mucosa ATCC
           25996]
 gi|288566708|gb|EFC88268.1| D-alanyl-D-alanine carboxypeptidase DacA [Neisseria mucosa ATCC
           25996]
          Length = 417

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/311 (27%), Positives = 141/311 (45%), Gaps = 7/311 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           Y + D ++  V+A +  D    PASLTK+MTAY+ F  L+         +T+S    +  
Sbjct: 66  YIVTDLHSHQVLASSNIDTQIEPASLTKMMTAYLTFKALENGTLRADQMLTVSDAGWKIE 125

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLSA 149
            S          ++ + +K +IV+S ND A  +AE++   +   FVQ MN  +K LG++ 
Sbjct: 126 GSRMFLIPKVPASVSDLIKGMIVQSGNDAATTLAEAMGGGSVDVFVQQMNEEAKRLGMTK 185

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           THF N  G+   GH +T  D+AILS  +  D+P+Y   F IK  +    + PN N  +  
Sbjct: 186 THFKNPTGLAAEGHVSTVGDLAILSAALIHDYPKYYPVFSIKSFKYNNVEQPNRNLLLYR 245

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTG T ++G+N+ AS+ +  + ++++++G      R   S  LL+        
Sbjct: 246 DSNVDGLKTGHTESAGYNLAASSKRNGRRIVSIVVGTDSTEARASESGKLLNWALQAFDT 305

Query: 270 RKKINYI----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            K  N          Y+ +  +      E+V  T       N +    +  +       K
Sbjct: 306 PKLYNGGEIISKVKVYKGSSKSVNVGFLEDVYITIPHDAGQNIKP-ILETVQPVVAPIRK 364

Query: 326 ITLLKN-KITK 335
              L   KI K
Sbjct: 365 GQSLGKLKIVK 375


>gi|313901633|ref|ZP_07835069.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313468095|gb|EFR63573.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 521

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 79/320 (24%), Positives = 132/320 (41%), Gaps = 19/320 (5%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++   +       L+D  +G V+    P     PAS TK++TA V           L   
Sbjct: 177 VAPPPSIDAAAAVLMDQASGQVLFARNPHQRRAPASTTKILTAIVALE-----FGNLDDV 231

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T+S++A+    S      G   +L   L  L+++S ND AVAIAE +  +E  F + MN
Sbjct: 232 VTVSEHAAATEGSTMDLVAGERYSLRELLWGLMLESGNDAAVAIAEHIAGSEAAFARLMN 291

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI-KTDFPQYMHYFQIKGLEIKGK 198
            T+  LGL  THF N HG+    H+T+A D+A+++      D+   +     K L     
Sbjct: 292 ETALRLGLRDTHFTNPHGLHDPAHFTSAYDLAVMTRYALANDYFARLVCQPEKVLCRGDG 351

Query: 199 KY----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +     +TN  +       G+KTG T A+G  +V+S     + LIAV+L + D   R  
Sbjct: 352 DWVRILSSTNRLLWYHEWIRGVKTGTTGAAGPCLVSSGELEGRRLIAVVLDSGD---RWA 408

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII------NYNT 308
            S +LL  GF      +                  P +   +      ++          
Sbjct: 409 DSRALLEWGFDQFAPAQGGRAGDGVGQVAVARGRQPAVEARLAGDLTALVPPGLVPRVRR 468

Query: 309 QMKEAKDKESHFIDFEKITL 328
            ++ A+  E+     +++  
Sbjct: 469 VLELARQVEAPVAAGQRLGT 488


>gi|312113134|ref|YP_004010730.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311218263|gb|ADP69631.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 584

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 84/273 (30%), Positives = 144/273 (52%), Gaps = 6/273 (2%)

Query: 9   AMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           A+ +L+   P  +          +      ++D +TG ++       P  PAS+TK+MT 
Sbjct: 3   ALFLLAVSSPAEARRRASHAQSYSTASSAMVVDFHTGRILISRNATDPRFPASVTKVMTL 62

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  L++ K  + T + +S  A+   P+      G T+T+ + +  ++ KSAND+AV 
Sbjct: 63  YLLFDALRDGKLNMNTKLRVSAYAASQSPTKLGLDAGDTITVSDVIGAIVTKSANDMAVV 122

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE+L  +E++F + M   ++ +G+  T F NA G+      TTA+D+ IL+  + TD P
Sbjct: 123 VAEALAGSEEEFARRMTQKARTIGMLNTTFRNASGLPNSEQRTTAQDLVILARSVITDHP 182

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +    F  K  +  G+ Y N N  + ++ G +GMKTGFT ASGFN++A+A +G++ LIAV
Sbjct: 183 ERSRVFSTKYFQYDGEIYRNHNTMLFSYEGMEGMKTGFTSASGFNLLATARRGEKRLIAV 242

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +LG      RN    ++L   +           
Sbjct: 243 VLGGSSARVRNAAMRNILDASWSKAMTLTAAKK 275


>gi|144898029|emb|CAM74893.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 424

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 141/260 (54%), Gaps = 1/260 (0%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            + +  +  + P  + A  ++     ++D + G+V+    PD    PASLTK+MT Y++F
Sbjct: 27  ALMLMTILVLAPHTAHARDDR-YASIVVDADNGNVLYAVNPDRRSYPASLTKVMTLYLLF 85

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L++ K  L + + +S +A+   PS    K G  + +++A+  L+ KSAND+AV +AE+
Sbjct: 86  DALEQGKLTLNSRMPVSAHATRQSPSKLNLKVGDRIDVEDAVLSLVTKSANDVAVVVAEA 145

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E  F + M   ++ LG+S+T + NA G+   G  +T RD A L+  +     +Y H
Sbjct: 146 IGGSEDDFAEMMTRKARQLGMSSTTYRNASGLPDMGQISTPRDQATLARALVKHHGRYYH 205

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           YF  +    +G+     N  +  + GADG+KTG+  ASGFN++ASA +  + ++ V+ G 
Sbjct: 206 YFSTRQFNWQGQPISTHNRLMLRYQGADGIKTGYINASGFNLIASAKRDGKRIVGVVFGG 265

Query: 247 LDRNTRNKVSASLLSMGFYN 266
                R+   A +L  GF  
Sbjct: 266 NTAGWRDNNMAQILDKGFAR 285


>gi|295103490|emb|CBL01034.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 410

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 91/325 (28%), Positives = 140/325 (43%), Gaps = 8/325 (2%)

Query: 15  NIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            +           LP     L+D  +G V+ E   D     AS+TK+MT  + F  +   
Sbjct: 44  AVQTLTVTPPQITLPCRAAILIDQTSGTVLYEMNADQTMPIASITKVMTLLLTFEAVHAG 103

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  + T + +S++A     S    + G   TLD  LK + V SAND AVA+AE +  +E 
Sbjct: 104 RLTMDTAVPVSEHAYHMGGSQIWLEPGEQFTLDEMLKAICVSSANDAAVAVAELVGGSEP 163

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--YMHYFQI 190
            FVQ MN  +  LG+  T F NA G+   GH +TARD+AI+S  I T  P+  +      
Sbjct: 164 AFVQQMNARAAELGMEHTTFRNACGLDTEGHLSTARDVAIMSRTILTTCPEVLHYTGIWT 223

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
             L     +  NTN  +  + G  G+KTG T  +G  I ASA +   +LIAV+LGA    
Sbjct: 224 DTLRGGQTQLVNTNKLLRRYNGITGLKTGTTGGAGVCITASATRDGLNLIAVVLGAPSSK 283

Query: 251 TRNKVSASLLSMGFYNKTDRK---KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
            R + + +LL  GF               ++   + +    VP     +  T        
Sbjct: 284 ERFEAATTLLDYGFAAYRAAPVPLPQERPLQLKVKGSTEETVPLDYAALPQTALLPAESA 343

Query: 308 TQMKEA-KDKESHFIDFEKITLLKN 331
            Q+    +  ++      +   +  
Sbjct: 344 GQLTVQLELPDTLEAPVTRGQTVGK 368


>gi|222085114|ref|YP_002543644.1| D-alanyl-D-alanine carboxypeptidase protein [Agrobacterium
           radiobacter K84]
 gi|221722562|gb|ACM25718.1| D-alanyl-D-alanine carboxypeptidase protein [Agrobacterium
           radiobacter K84]
          Length = 429

 Score =  180 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 98/326 (30%), Positives = 162/326 (49%), Gaps = 4/326 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++FL+ ++ A++    P  S A       Y ++D  TG V+A +  D   +PASLTK+M
Sbjct: 1   MKKFLMALSAAVVLLGAPVASFA----GSAYFIMDAKTGAVLASSNADDLNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  +   K    + I +S NA+  PP+    K G T+T+  A+  +I+KSAND A
Sbjct: 57  TLYMTFEAINRGKLSWNSKIPVSSNAAGKPPTKLGLKPGGTVTVREAVDGMIIKSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE+L  +E  F + M   ++ +G+  T FMNA G+      TTARDM+ L+  +  +
Sbjct: 117 AAMAEALGGSESGFARLMTQKAREIGMRRTVFMNASGLPNMQQVTTARDMSTLAVALINN 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +PQ    F   G   +G++    N  +  + G DG+KTG+T ASGFN+V++   G++ +I
Sbjct: 177 YPQEYRLFSQTGFTYRGQRVRGHNNLMYRYEGMDGIKTGYTNASGFNLVSAVRHGNRRVI 236

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
            V++G      R+ + ASLL               +      +    EV + S +V    
Sbjct: 237 GVVMGGATARGRDALMASLLDRYVPKAASSSTSRLVASIGGGKVKQVEVASASNDVAMEV 296

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKI 326
                  T+ +      S  + +  +
Sbjct: 297 DTQTTATTRKRTDTAPVSAPLAYAAV 322


>gi|189024322|ref|YP_001935090.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
 gi|261325261|ref|ZP_05964458.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261752478|ref|ZP_05996187.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|261758361|ref|ZP_06002070.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella sp. F5/99]
 gi|265998302|ref|ZP_06110859.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
 gi|189019894|gb|ACD72616.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
 gi|261301241|gb|EEY04738.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261738345|gb|EEY26341.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella sp. F5/99]
 gi|261742231|gb|EEY30157.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|262552770|gb|EEZ08760.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
          Length = 461

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 11/333 (3%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++      L+       +      ++A+ +      ++D NTG  +     D    PAS
Sbjct: 1   MKKAAQVSLLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MT Y++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KS
Sbjct: 61  LTKMMTLYMLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND+A A+ E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL  
Sbjct: 121 ANDVAAAVGEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGM 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            ++  FP+   YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S    
Sbjct: 181 ALRRHFPREFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLD 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
            + L+AV++G     +R+   A L+                  +       +E P +   
Sbjct: 241 GRRLVAVVMGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVAS 294

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +   + +           +D  +  I    I  
Sbjct: 295 IDLPKAKRAPVPVARIAVEDIINAEIGEGDIDQ 327


>gi|255020045|ref|ZP_05292118.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
 gi|254970574|gb|EET28063.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
          Length = 381

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 143/347 (41%), Gaps = 16/347 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNK----------LPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +I+A  + +        + T            +  Y L+D  TG ++A   P     PAS
Sbjct: 5   LILATGLAAKALAGTPTSATPALVPPPPALPGVKSYVLMDFRTGAILAAKNPQLQLPPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTKLMTAY+ +  L + +      I +S  A     S+   +    +T+D  +  LI+ S
Sbjct: 65  LTKLMTAYLSYEALADGRLRWHERIPVSTVAWHTGGSSMFIQPNLPVTVDQLMHGLIIDS 124

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVA+A+++  +   FV  MN T+  LGL+  H+ +  G+   G + +A ++A LS 
Sbjct: 125 GNDAAVALAQAVAGSRAAFVDEMNATAAQLGLTGAHYTDVDGLPHPGLHLSAMNIAELSR 184

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +   +PQ +   +I+          + N A+      DG+KTG T A+G  +  +  + 
Sbjct: 185 DLIARYPQVLQISRIQYYRYNHITQRSWNPALFGHPHVDGLKTGHTQAAGHCMDTTIDRH 244

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
            + LIAV++GA           SL    +    D + +         ++ + +  +   E
Sbjct: 245 GRRLIAVVMGAQSWPAGVHDVMSLFDYAYRFSHDHELLKAGQIVGTYKDAALDPDHFPVE 304

Query: 296 ------VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 V   + +       +   +           +  ++ ++  K
Sbjct: 305 AAHTVWVSAFEGQAHEIRRVLHYDQLGGRAVAQGTPVGSMRFELNGK 351


>gi|260752472|ref|YP_003225365.1| serine-type D-Ala-D-Ala carboxypeptidase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258551835|gb|ACV74781.1| Serine-type D-Ala-D-Ala carboxypeptidase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 400

 Score =  180 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 135/354 (38%), Gaps = 20/354 (5%)

Query: 1   MRQFLVI---IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M+  L      A+   +      +       P   + D ++G V+     D    PAS+ 
Sbjct: 9   MKPVLFFSASAALCFTAAASYAAAPPFETIAPIAYMKDLSSGAVLYAKDADRRMPPASMA 68

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLI 112
           K+MT YV F  +K+ +  L  PIT+     +        S         ++  N L  ++
Sbjct: 69  KMMTVYVAFDLIKKGQLKLDQPITVQPETWKKWHGPSAGSTMFLSPNEQVSAANLLHGIV 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH-YTTARDMA 171
             S ND  V ++E +  TE+ FV  MN  ++ +GL+ +HF  A+G    G  Y TA D+ 
Sbjct: 129 TLSGNDACVVLSEGIAGTEQAFVALMNEKAQKIGLTNSHFGTANGWPDGGATYVTAHDLE 188

Query: 172 ILSWRIKTDFPQYMHY--------FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            L+     DFP             +       K     N +  +G   GADG+KTG T  
Sbjct: 189 TLAEATIRDFPDLYRQFYGQREFTWGKTMGSGKDITQSNRDPLLGVIDGADGLKTGHTDE 248

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DF 280
           +G+    SA Q  + L+ V+ G      R + S + ++ GF     +  +   ++     
Sbjct: 249 AGYGFTGSAEQRGRRLVMVMAGLPSNAARREQSIAFMNWGFRAWKSKPVVRKGVRVQTAE 308

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            Q   S+ V  ++         I   +    +   +        +   + + + 
Sbjct: 309 VQGGSSSTVGLVAPRDLAVTLPITASDQMKVKVVYQGPIKAPIAQGQHIADLVV 362


>gi|148379819|ref|YP_001254360.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|153934177|ref|YP_001384117.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153937458|ref|YP_001387657.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           Hall]
 gi|148289303|emb|CAL83399.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|152930221|gb|ABS35721.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum A
           str. ATCC 19397]
 gi|152933372|gb|ABS38871.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum A
           str. Hall]
          Length = 407

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 152/377 (40%), Gaps = 42/377 (11%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIA-----------------------ETNKLPYYT 32
           M++     F VII +  +  +F     A                                
Sbjct: 1   MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKKEEKAEDKDSNKEGDSDVDAKSAL 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L++  TG VI E  P   + PAS+TK+MT  +    +   K  LT  +TIS+NA +   S
Sbjct: 61  LIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                 G   T+++ LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ L +  T F
Sbjct: 121 TMLLDVGEERTVEDLLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQKLNMKDTSF 180

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            N  G+   GH T+A D++I+S  +            +   I           N N  V 
Sbjct: 181 KNCTGLSAEGHKTSAYDISIMSRELLKHKQILKYTGTYMETISEGRKSPIGLVNHNKLVR 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L++ GF    
Sbjct: 241 FFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLMNYGFSKFE 300

Query: 269 DRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKES 318
            +  +             +     +    EE+    ++        K      + + K +
Sbjct: 301 CKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKTKITNKCIIDENKKEYKIN 360

Query: 319 HFIDFEKITLLKNKITK 335
             +   +     N I K
Sbjct: 361 EEVGICEFYSDGNLIGK 377


>gi|295402720|ref|ZP_06812662.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294975251|gb|EFG50887.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 450

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/369 (20%), Positives = 135/369 (36%), Gaps = 39/369 (10%)

Query: 7   IIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
            + + +     PF +          +     L+D NTG ++ +   D     AS+TK+MT
Sbjct: 12  FLMIGLCFYFLPFHAAKAAGDPLNIEADAAILVDANTGRILYQKNIDTVLGIASMTKMMT 71

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y++   +KEK+       T S          S             ++ L    A   A 
Sbjct: 72  EYLLLEAVKEKRVKWDQQYTPSDYVYRLSQDRSLSNVPLRKDGKYTIRELYEAMAIYSAN 131

Query: 122 AIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------H 163
           A   ++ +    +E+ FV+ MN  +  LGL    F+N+ G+                  +
Sbjct: 132 AATVAIAEIVGGSEQNFVKMMNEKANQLGLKGYKFVNSTGLSNEDLKGFHPEGTNQSEEN 191

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +AR +A L++ +  ++P+ +          +       K  N NW     V  + G D
Sbjct: 192 VMSARSVATLAYHLLKEYPEVLETASTPRKIFREGTDDQIKMDNWNWMLPGLVHAYEGVD 251

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-----NTRNKVSASLLSMGFYNKTD 269
           G+KTG+T  +G+    +A +     I V++ A          R + +  LL  GF N + 
Sbjct: 252 GLKTGYTEFAGYCFTGTAERNGVRFITVVMNAKSNGKSTIEARFEQTRKLLDYGFSNYSM 311

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +K  +   +   +  L             T K +       +E K +  +  D +K+T  
Sbjct: 312 KKLYSKGYELKGKSVLPVVKGKEKSVAIATDKPLSLVVKNGEEKKYRPVYVFDKKKLTAD 371

Query: 330 KNKI--TKK 336
                  KK
Sbjct: 372 GELTAPVKK 380


>gi|260565574|ref|ZP_05836058.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|260151642|gb|EEW86736.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|326538900|gb|ADZ87115.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis
           M5-90]
          Length = 461

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 11/333 (3%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++      L+       +      ++A+ +      ++D NTG  +     D    PAS
Sbjct: 1   MKKAAQVSLLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MT Y++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KS
Sbjct: 61  LTKMMTLYMLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND+A A+ E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL  
Sbjct: 121 ANDVAAAVGEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGM 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            ++  FP+   YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S    
Sbjct: 181 ALRRHFPREFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLD 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
            + L+AV++G     +R+   A L+                  +       +E P +   
Sbjct: 241 GRRLVAVVMGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVAS 294

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +   + +           +D  +  I    I  
Sbjct: 295 IDLPKTKRAPVPVARIAVEDIINAEIGEGDIDQ 327


>gi|229173162|ref|ZP_04300712.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus MM3]
 gi|228610339|gb|EEK67611.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus MM3]
          Length = 442

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 133/375 (35%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ E   D     
Sbjct: 12  KRFIAIVTVLTLFCSIVVTSGRATAETVSAIDVEAGSAILVEANSGKILYEKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKIKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALVEEIAGKEVDFVKMMNDKSKEFGMKNYKFVNSTGLTNYDLKGHHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N N      
Sbjct: 192 GTTPDEKNKMSARDCAILAKRLVQDFPKILDTAKIPKKTFQNGGKYPIDMVNFNMMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKANSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYI-------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +        
Sbjct: 312 FEMKKVHGKDSVVKGHETVHVANAKDKDVVVQTKQAVSLPMPKGNKDVYKKEFKVSNNEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGLTISKMII 386


>gi|170748801|ref|YP_001755061.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655323|gb|ACB24378.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 509

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 6/310 (1%)

Query: 2   RQFLVIIAMA--MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           R+  V +A    +L      +  A    +P   + D ++G VI    P  PW PAS+TKL
Sbjct: 7   RRLTVGLAALTGLLGAGLVGIGAANAVTVPI-LVADVDSGKVIYAQAPTDPWYPASITKL 65

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT YV    +++ K  L + ITIS  A+  PPS   FK G+ +TLDNALK+++VKSAND+
Sbjct: 66  MTTYVALDLVRQGKVSLDSMITISAAAAAEPPSKMGFKPGTQLTLDNALKIIMVKSANDV 125

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A AI ESL  + + F   MN T++ +G+  + + N +G+     +T+ARDMA+L+  +  
Sbjct: 126 AYAIGESLGGSVENFAALMNETAQRIGMHDSRWYNPNGLPDPRQWTSARDMAVLARALIR 185

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           DFP     F I  ++       N N  +G + G DGMKTGF C+ GFN+VA+A +  + +
Sbjct: 186 DFPDSHDLFSISAIQFGRAVMANHNGLLGRYPGTDGMKTGFICSGGFNVVATATRNGRRI 245

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           + +++G      R+  +A L    F         +    D    +     P++   VC  
Sbjct: 246 VTIVMGQPSPRERDVKTADLFDYAF---GQSAGWSSPTLDALPASAIPAPPDMRPFVCGG 302

Query: 300 QKEIINYNTQ 309
           +K     +  
Sbjct: 303 KKPPAIEDGP 312


>gi|56551985|ref|YP_162824.1| serine-type D-Ala-D-Ala carboxypeptidase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56543559|gb|AAV89713.1| Serine-type D-Ala-D-Ala carboxypeptidase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 400

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 135/354 (38%), Gaps = 20/354 (5%)

Query: 1   MRQFLVI---IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M+  L      A+   +      +       P   + D ++G V+     D    PAS+ 
Sbjct: 9   MKPVLFFSASAALCFTAAASYAAAPPFETIAPIAYMKDLSSGAVLYAKDADRRMPPASMA 68

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLI 112
           K+MT YV F  +K+ +  L  PIT+     +        S         ++  N L  ++
Sbjct: 69  KMMTVYVAFDLIKKGQLKLDQPITVQPETWKKWHGPSAGSTMFLSPNEQVSAANLLHGIV 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH-YTTARDMA 171
             S ND  V ++E +  TE+ FV  MN  ++ +GL+ +HF  A+G    G  Y TA D+ 
Sbjct: 129 TLSGNDACVVLSEGIAGTEQAFVALMNEKAQKIGLTNSHFGTANGWPDGGATYVTAHDLE 188

Query: 172 ILSWRIKTDFPQYMHY--------FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            L+     DFP             +       K     N +  +G   GADG+KTG T  
Sbjct: 189 TLAEATIRDFPDLYRQFYGQREFTWGKTMGSGKDITQSNRDPLLGVIDGADGLKTGHTDE 248

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DF 280
           +G+    SA Q  + L+ V+ G      R + S + ++ GF     +  +   ++     
Sbjct: 249 AGYGFTGSAEQRGRRLVMVMAGLPSNAARREQSIAFMNWGFRAWKSKPVVRKGVRVQTAE 308

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            Q   S+ V  ++         I   +    +   +        +   + + + 
Sbjct: 309 VQGGSSSTVGLVAPRDLAVTLPITASDQMKVKVVYQGPIKAPIAQGQHIADLVV 362


>gi|315296383|gb|EFU55683.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 16-3]
          Length = 347

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N V    +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIVLGTVQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|229011746|ref|ZP_04168928.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides DSM 2048]
 gi|228749543|gb|EEL99386.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus mycoides DSM 2048]
          Length = 442

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 137/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 12  KRFITIVTVLTLFCSMAVTFGRASAETVPAIDVEAGSAILVEANSGKILYQKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQKGGKYPIDMTNFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVEKNGMRLISVVIKANSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +     +  
Sbjct: 312 FEVKKVYGKDSVVKGHETVRVANAKDKDIVVQTKQAVSLPMPKGNKDVYKKEFKVSNKEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISQMII 386


>gi|229145091|ref|ZP_04273484.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST24]
 gi|228638412|gb|EEK94849.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST24]
          Length = 442

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 135/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ E   D     
Sbjct: 12  KRFITIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYEKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHPE 191

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ ++  +I     +          N NW     
Sbjct: 192 GTTLDEKNKMSARDCAILAQRLIQDFPKILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +      +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEARDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +            +          + V    + V     +      + +     +  
Sbjct: 312 FEVKNFYGKDSVIKGYETVRVANAKDKDVVVQTKQAVSLPMSKGNKDIYKKEFKVLNKEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISKMII 386


>gi|241761932|ref|ZP_04760017.1| Serine-type D-Ala-D-Ala carboxypeptidase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373612|gb|EER63184.1| Serine-type D-Ala-D-Ala carboxypeptidase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 400

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 135/354 (38%), Gaps = 20/354 (5%)

Query: 1   MRQFLVI---IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M+  L      A+   +      +       P   + D ++G V+     D    PAS+ 
Sbjct: 9   MKPVLFFSASAALCFTAAASYAAAPPFETIAPIAYMKDLSSGAVLYAKDADRRMPPASMA 68

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLI 112
           K+MT YV F  +K+ +  L  PIT+     +        S         ++  N L  ++
Sbjct: 69  KMMTVYVAFDLIKKGQLKLDQPITVQPETWKKWHGPSAGSTMFLSPNEQVSAANLLHGIV 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH-YTTARDMA 171
             S ND  V ++E +  TE+ FV  MN  ++ +GL+ +HF  A+G    G  Y TA D+ 
Sbjct: 129 TLSGNDACVVLSEGIAGTEQAFVALMNEKAQKIGLTNSHFGTANGWPDGGATYVTAHDLE 188

Query: 172 ILSWRIKTDFPQYMHY--------FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            L+     DFP             +       K     N +  +G   GADG+KTG T  
Sbjct: 189 TLAEATIRDFPDLYRQFYGQREFTWGKTMGSGKDITQSNRDPLLGVIDGADGLKTGHTDE 248

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DF 280
           +G+    SA Q  + L+ V+ G      R + S + ++ GF     +  +   ++     
Sbjct: 249 AGYGFTGSAEQRGRRLVMVMAGLPSNAARREQSIAFMNWGFRAWKSKPVVRKGVRVQTAE 308

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            Q   S+ V  ++         I   +    +   +        +   + + + 
Sbjct: 309 VQGGSSSTVGLVAPRDLAVTLPITASDQMKVKVVYQGPIKAPIAQGQHIADLVV 362


>gi|260754913|ref|ZP_05867261.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260675021|gb|EEX61842.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
          Length = 461

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 11/333 (3%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++      L+       +      ++A+ +      ++D NTG  +     D    PAS
Sbjct: 1   MKKAAQVSLLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MT Y++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KS
Sbjct: 61  LTKMMTLYMLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND+A A+ E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL  
Sbjct: 121 ANDVAAAVGEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGM 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            ++  FP+   YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S    
Sbjct: 181 ALRRHFPREFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLD 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
            + L+AV++G     +R+   A L+                  +       +E P +   
Sbjct: 241 GRRLVAVVMGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEDPQVVAS 294

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +   + +           +D  +  I    I  
Sbjct: 295 IDLPKAKRAPVPVARIAVEDIINAEIGEGDIDQ 327


>gi|153940158|ref|YP_001391119.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum F str.
           Langeland]
 gi|152936054|gb|ABS41552.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum F
           str. Langeland]
          Length = 407

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 14/325 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  TG VI E  P   + PAS+TK+MT  +    +   K  LT  +TIS+
Sbjct: 53  DVDAKSALLIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISE 112

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA +   S      G   T+++ LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ 
Sbjct: 113 NAKKMGGSTMLLDVGEERTVEDLLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQK 172

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKY 200
           L +  T F N  G+   GH T+A D++I+S  +            +   I          
Sbjct: 173 LNMKDTSFKNCTGLSVEGHKTSAYDISIMSRELLKHKQILKYTGTYMETISEGRKSPIGL 232

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  V  F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L+
Sbjct: 233 VNHNKLVRFFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLM 292

Query: 261 SMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK----- 311
           + GF     +  +             +     +    EE+    ++        K     
Sbjct: 293 NYGFSKFECKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKTKITNKCIIDE 352

Query: 312 -EAKDKESHFIDFEKITLLKNKITK 335
            + + K +  +   +     N I K
Sbjct: 353 NKKEYKINEEVGICEFYSDGNLIGK 377


>gi|150016747|ref|YP_001309001.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903212|gb|ABR34045.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 396

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 10/315 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     L++  +G ++ E   D  + PAS+TK+MT  +    +   K  L   +T S+
Sbjct: 42  NIEARSALLMEPMSGKILYEKNADEKFAPASVTKIMTMLITMEGVDSGKIKLDDKVTCSE 101

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA +   S      G   T++  LK + + S ND AVA+AE L  TE++FV  MN  ++ 
Sbjct: 102 NAKKMGGSTMLLDTGEIRTVEELLKGVAIASGNDAAVALAEYLGGTEQEFVNMMNKRAQE 161

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIKGKKY 200
           LG+  T F N +G+   GH +TA+D+AI+S  +            +   I        + 
Sbjct: 162 LGMVNTTFKNCNGLPADGHMSTAKDIAIMSKELLKHPKVLKYTGTYMDNISEGRKSPIEL 221

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  V  F G DG+KTGFT  + + I A+A +    +++VI+GA     RN+ +  LL
Sbjct: 222 VNHNKLVRFFEGCDGLKTGFTDEAKYCISATATRNGVRMLSVIMGAPTYKIRNRDAGVLL 281

Query: 261 SMGFYNKTDRKKINYIIKDFYQ----QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           + GF     +K ++   +        Q     +    +++     +  N + + K   D 
Sbjct: 282 NYGFSKYEGKKLVSKDEEIDKVYMDEQTDKFFMAMAKDDLNVILPKGDNKDLEKKIVID- 340

Query: 317 ESHFIDFEKITLLKN 331
                +++   ++  
Sbjct: 341 -ELRKEYKAGDIVGK 354


>gi|134299097|ref|YP_001112593.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
 gi|134051797|gb|ABO49768.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
          Length = 437

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 88/327 (26%), Positives = 155/327 (47%), Gaps = 12/327 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A      P +            L++ +TG VI  +    P++PAS+TKLM  Y++   + 
Sbjct: 49  ATALTYAPGICNPINLTAKGAILVNQDTGQVIYADQEHQPFHPASITKLMVLYILLENIH 108

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                   P+  SK       +    ++G  ++L+  +K ++V SAND AVA+AE +  +
Sbjct: 109 NGVLHWEDPVQASKKVERINEAQIYLREGEVLSLEEMIKAMVVASANDAAVALAERVAGS 168

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVV---QHGHYTTARDMAILSWRIKTDFPQYMHY 187
           E  FV+ MN  +  LGL  +HF+NA G+     + HY +A D+A+L+  +  ++P+ + +
Sbjct: 169 EAAFVEIMNAKALELGLRNSHFINASGLPASNSYNHYMSAYDIALLAKYLLEEYPEVLEF 228

Query: 188 FQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            ++    I+   +P  NTN  +G F G DG+KTG+T  +G+ +VA+A +  Q +I+V+LG
Sbjct: 229 SRLTTTTIRNGSFPIANTNSLLGIFQGMDGLKTGYTDRAGWCLVATAQRNGQRMISVVLG 288

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKI-------NYIIKDFYQQNLSNEVPNISEEVCT 298
           +     R   + +LL+ GF +      I       NYI              NI  +   
Sbjct: 289 SPSNEIRKANTTALLNYGFQHYQRVNNIYVNGIKCNYIQSPLAVDGTVLVPINILSDTMG 348

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEK 325
            + +       +     +    +D +K
Sbjct: 349 LKVQYQKEKIFLSGWGTQVEFQVDSDK 375


>gi|319935945|ref|ZP_08010369.1| D-alanyl-D-alanine carboxypeptidase [Coprobacillus sp. 29_1]
 gi|319809059|gb|EFW05555.1| D-alanyl-D-alanine carboxypeptidase [Coprobacillus sp. 29_1]
          Length = 381

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 81/346 (23%), Positives = 152/346 (43%), Gaps = 12/346 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M + ++I    ML  +FP +  AE            L++ +T  V+  ++      PAS 
Sbjct: 1   MIKKILICLFVMLLCMFPKVVYAEDLKLAPNAASSVLMEASTKQVLYSSHETDKLFPAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT  ++F  + +        +T S  A+    S    ++G  M++ +  K + + SA
Sbjct: 61  TKIMTMILMFEAINKGTLKWDDVLTCSAYAASMGGSQIYLEEGEQMSVSDLFKGISIASA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND  V + E +  T   FV+ MN  +K L L+ THFMN  G+    HYT A D+ +++  
Sbjct: 121 NDACVMVGERIAGTNDGFVKMMNEKAKELNLTNTHFMNPTGLHDDNHYTCALDLGLMASY 180

Query: 177 IKT------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           +             ++   I+    +     NTN  + ++ GADG+KTG+T  +G+ IV+
Sbjct: 181 LIQIGGDRLFATTSLYDSYIRENSAQKFWLVNTNKLLKSYEGADGLKTGYTKEAGYCIVS 240

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNE 288
           +A +    LIAV++   +   RN+  + LL  GF    +        II+    +N   +
Sbjct: 241 TAKRNGLRLIAVVMKESEPKVRNQEVSQLLDYGFSLYENVILFKKDDIIEKIPIENARQK 300

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              +  +      +  +   ++    +  +     +K   + + + 
Sbjct: 301 SVEVVCKEDVVYVKDKSAQDEVTYEMNYTNLVPPIKKGETIGHILL 346


>gi|221235180|ref|YP_002517616.1| D-alanyl-D-alanine serine-type carboxypeptidase [Caulobacter
           crescentus NA1000]
 gi|220964352|gb|ACL95708.1| D-alanyl-D-alanine serine-type carboxypeptidase [Caulobacter
           crescentus NA1000]
          Length = 451

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 152/320 (47%), Gaps = 15/320 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G V+ +   D P  PAS+TK+MT Y+ F  L E +  LT  I +S  A+  
Sbjct: 64  AAIVIDANSGEVLYDKRGDSPRYPASITKVMTLYLTFEALSEGRLKLTDQIVMSPRAAAQ 123

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G +MT+D A+K + VKSAND+A A+AE L  +E +F   M    + LG+  
Sbjct: 124 APTKIGLRPGESMTVDEAIKAMAVKSANDVATAVAERLAGSESRFAALMTLRGQELGMRN 183

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F+NA G+      +TARD+AILS     DFPQY  YF +KG   +G      N  + +
Sbjct: 184 TRFVNASGLPDSRQISTARDLAILSRATMRDFPQYYSYFSVKGFYFRGNYVKGHNRLLDS 243

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY---- 265
             G DG+KTG+T ASGFN+  SA++  + LIAV+LG      R+     LL  GF     
Sbjct: 244 MEGFDGLKTGYTNASGFNLAGSAVRDGRRLIAVVLGGPSTAWRDNNMEDLLLTGFDVIKR 303

Query: 266 -----------NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
                      N  + +    I +   +Q   ++           +   +  +  ++ A+
Sbjct: 304 RSRGERTTIAANIYEDEPSGPIERPSAEQGDGDQAGLSIVLTENPRSAPVKVSPTLRGAQ 363

Query: 315 DKESHFIDFEKITLLKNKIT 334
                    +       ++ 
Sbjct: 364 AATPVKAAKKPKGEWGVQVG 383


>gi|16126400|ref|NP_420964.1| D-alanyl-D-alanine carboxypeptidase [Caulobacter crescentus CB15]
 gi|13423656|gb|AAK24132.1| D-alanyl-D-alanine carboxypeptidase [Caulobacter crescentus CB15]
          Length = 435

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 98/320 (30%), Positives = 152/320 (47%), Gaps = 15/320 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G V+ +   D P  PAS+TK+MT Y+ F  L E +  LT  I +S  A+  
Sbjct: 48  AAIVIDANSGEVLYDKRGDSPRYPASITKVMTLYLTFEALSEGRLKLTDQIVMSPRAAAQ 107

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G +MT+D A+K + VKSAND+A A+AE L  +E +F   M    + LG+  
Sbjct: 108 APTKIGLRPGESMTVDEAIKAMAVKSANDVATAVAERLAGSESRFAALMTLRGQELGMRN 167

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F+NA G+      +TARD+AILS     DFPQY  YF +KG   +G      N  + +
Sbjct: 168 TRFVNASGLPDSRQISTARDLAILSRATMRDFPQYYSYFSVKGFYFRGNYVKGHNRLLDS 227

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY---- 265
             G DG+KTG+T ASGFN+  SA++  + LIAV+LG      R+     LL  GF     
Sbjct: 228 MEGFDGLKTGYTNASGFNLAGSAVRDGRRLIAVVLGGPSTAWRDNNMEDLLLTGFDVIKR 287

Query: 266 -----------NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
                      N  + +    I +   +Q   ++           +   +  +  ++ A+
Sbjct: 288 RSRGERTTIAANIYEDEPSGPIERPSAEQGDGDQAGLSIVLTENPRSAPVKVSPTLRGAQ 347

Query: 315 DKESHFIDFEKITLLKNKIT 334
                    +       ++ 
Sbjct: 348 AATPVKAAKKPKGEWGVQVG 367


>gi|147678303|ref|YP_001212518.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
 gi|146274400|dbj|BAF60149.1| D-alanyl-D-alanine carboxypeptidase [Pelotomaculum
           thermopropionicum SI]
          Length = 371

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 81/327 (24%), Positives = 133/327 (40%), Gaps = 17/327 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P ++           L+D  TG V           PASLTK+MTA V             
Sbjct: 19  PAVAAPPAITADAAILMDVQTGQVYYAKNHYRRAEPASLTKIMTAVVALENGNLG----D 74

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
                 + A+    S    +KG  +TL+  LK  ++ SAND  VAIAE +  + ++F++ 
Sbjct: 75  VVTVGGRAAAVSMGSIIDLRKGEKITLEELLKAALISSANDSTVAIAEHVGGSHERFIKM 134

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK----TDFPQYMHYFQIKGL 193
           MN  +  LGL  T + N +G     HYTTARD+A+L+         +         ++ +
Sbjct: 135 MNAKAAVLGLFGTRYANTNGYHDPNHYTTARDLAVLTRCALGHPKFNELVQTKEAAVRWV 194

Query: 194 EI--KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           E   + +K  N+N    G + G DG+KTG T  +G  + ASA +  + LIAV+L +   +
Sbjct: 195 EPPEREEKIINSNRLLFGGYEGIDGVKTGTTPMAGNCLAASATREGRRLIAVVLHS---D 251

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
            R +    L   GF        +       K       +  V  ++E+    + +  +  
Sbjct: 252 NRYQDCVRLFEYGFNVIRPVLVVRAGEVVAKRPVTGGSAGAVEAVAEKDLEVRLDPDDLA 311

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
              K  +         +K   +   + 
Sbjct: 312 KLEKRVETGGPVAAPVKKGQKIGESVY 338


>gi|229051351|ref|ZP_04194858.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH676]
 gi|228722004|gb|EEL73442.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH676]
          Length = 442

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 74/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ E   D     
Sbjct: 12  KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYEKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHPE 191

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFPQ ++  +I     +          N NW     
Sbjct: 192 GTTLDEKNKMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +            +          + V    + V     +      + +     +  
Sbjct: 312 FEVKNFYGKDSVIKGYETVRVANAKDKDVVVQTKQAVSLPMSKGNKDIYKKEFKVLNKEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISKMII 386


>gi|251794126|ref|YP_003008857.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. JDR-2]
 gi|247541752|gb|ACS98770.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. JDR-2]
          Length = 428

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 26/332 (7%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L+D +TG V+ E   D P  PAS+TK+MT Y+V   +K K       IT+S+ A+ 
Sbjct: 49  SSAILIDADTGQVVYEVNADEPRPPASMTKMMTEYIVLEQIKSKALNWDEMITVSEEAAN 108

Query: 89  YP--PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
            P   S     +G    + +    + V SAND  +A+A ++  +E+ FV+ MN T++ LG
Sbjct: 109 TPKDGSQVYLAQGEQYKVKDLYMAMAVGSANDATIALASAIGGSEQGFVEKMNETAQKLG 168

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---KYPNT 203
           L++ H+ +A G+      + A+D A L+  I  + P+++ Y      + + +      N 
Sbjct: 169 LTSAHYTSATGLADTTVIS-AKDQAKLAQIIIKNDPEFLEYASTTEYKFRPRDDKPIVNI 227

Query: 204 NWAVGT-----------FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
           NW + +           + G DGMKTG+  A+G+    +  +GDQ  I+V++    +  R
Sbjct: 228 NWMLASNKSNTYLKAFAYDGVDGMKTGYISAAGYTFTGTVKRGDQRYISVVMNTKSKEAR 287

Query: 253 NKVSASLLSMGFYNKTDRKKI------NYIIKDFYQQNLSNEVPNISE-EVCTTQKEIIN 305
              +A L +  F +   +  I              ++ +   VP I+E ++    K+  +
Sbjct: 288 FNETAKLYNYAFNSLEKKTVIPAKSVVEKAESVKIKKGVKKSVPIITESDISLIVKKGAD 347

Query: 306 YNTQMK--EAKDKESHFIDFEKITLLKNKITK 335
              ++   E K  E      +   ++     K
Sbjct: 348 PKVELTGYELKKPEELVAPIKAGQVVGTATYK 379


>gi|53803228|ref|YP_115023.1| D-alanyl-D-alanine carboxypeptidase [Methylococcus capsulatus str.
           Bath]
 gi|53756989|gb|AAU91280.1| putative D-alanyl-D-alanine carboxypeptidase [Methylococcus
           capsulatus str. Bath]
          Length = 362

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 86/272 (31%), Positives = 128/272 (47%), Gaps = 1/272 (0%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M + L      ++  +       E    P    +++  +  V+ E   D   +PASLTK+
Sbjct: 2   MSRRLCRFVGIVVVAVAVGWVAGEAVAAPYSALVMEVESDRVLYERNADEIRHPASLTKM 61

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+VF  L + +  L      S  A+   PS    + G  +T++  +  L+  SAND 
Sbjct: 62  MTLYLVFEALVQGRISLYDTFYASSYAASRSPSRIGLRPGDPLTVEEGILALVTCSANDA 121

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A  + E L  +E  F   M   ++ LG+S T F NA G+      TTARDM  L   +  
Sbjct: 122 AATLGEGLAGSEPAFAAMMTRKARELGMSQTVFRNASGLPDPEQVTTARDMYRLGKALLK 181

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FPQY  YF     + +G+ + N N  +  + GADG+KTGF  ASGFN+VASA +    L
Sbjct: 182 HFPQYYPYFSTSRFQYRGRSFHNHNHLLENYYGADGIKTGFVNASGFNLVASARRNGVRL 241

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           + V+ G      R+     +L  GF     R+
Sbjct: 242 VGVVFGGNSSFRRDAHMRDILDDGFAQIEGRE 273


>gi|300854313|ref|YP_003779297.1| D-alanyl-D-alanine carboxypeptidase [Clostridium ljungdahlii DSM
           13528]
 gi|300434428|gb|ADK14195.1| D-alanyl-D-alanine carboxypeptidase [Clostridium ljungdahlii DSM
           13528]
          Length = 435

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 25/349 (7%)

Query: 5   LVIIAMAMLSNIFPFLSIAET---------------NKLPYYTLLDTNTGHVIAENYPDH 49
           ++I+    +  +    +   +                      L++  +G VI E     
Sbjct: 46  ILILFFITVLWLPVVNAEPLSESNKKEMNSTESGLNINARSALLMEPASGKVIFEKSSHE 105

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS+TK+MT  +    +   +  L+  +T+S+NA +   S+     G   ++++ +K
Sbjct: 106 KLEPASVTKIMTMLLTMEAVDSGRISLSDKVTVSENAKKMGGSSMLLDTGEVRSVEDLIK 165

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            + + S ND AVA+AE L  +E +FVQ MN  +  LG+  T F N  G+ + GH TTA D
Sbjct: 166 GIGIASGNDAAVAMAEYLGGSEDQFVQLMNKRAAELGMKDTSFKNCTGLSEDGHLTTAYD 225

Query: 170 MAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +A++S  +            +   I        +  N N  V  F G DG+KTGFT ++ 
Sbjct: 226 IALMSRELLKHTRILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTSSAK 285

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFY 281
           + I A+A +    ++AVI+G+     RNK ++ +++ GF     +  +            
Sbjct: 286 YCISATATRDGARMLAVIMGSPTYKVRNKDASMMMNYGFSKYFGKNILKKGADVEKIPLN 345

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +      +   SE++    ++        K   DK  +   ++K   + 
Sbjct: 346 KAGDRFFIAKASEDLKVVVEKGKESKITYKCVIDK--NKKQYKKGEKVG 392


>gi|13473090|ref|NP_104657.1| penicillin-binding protein [Mesorhizobium loti MAFF303099]
 gi|14023838|dbj|BAB50443.1| penicillin-binding protein [Mesorhizobium loti MAFF303099]
          Length = 389

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 113/334 (33%), Positives = 184/334 (55%), Gaps = 10/334 (2%)

Query: 2   RQFLVIIAM-AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R FL + +  A++ ++    ++A         + D   G ++        W PASL+KLM
Sbjct: 4   RHFLKLFSAGAIMLSVLAGSALANPV-----VVFDLKNGQILQHQDAFKRWYPASLSKLM 58

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  +   +  L +PI ++K+++  PPS   FK GS M LDNALK+++VKSANDIA
Sbjct: 59  TAYVTFRAIAAGEVQLDSPIKVTKHSAGEPPSKMGFKPGSVMRLDNALKMMLVKSANDIA 118

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+ E++  ++  F + MN  +  LG++ THF+N +G+     YTTARD+++L   I+ +
Sbjct: 119 MAVGENVGGSQAAFAERMNAEAARLGMNGTHFVNPNGLYSPDQYTTARDLSVLVMAIRRE 178

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  +F I+GL +  K  PN N  +G + GADGMKTGF C SGFN++ SA +  ++L+
Sbjct: 179 FPQYAPWFSIEGLAVGKKAIPNYNLLIGRYPGADGMKTGFVCPSGFNMIGSATRNGRTLV 238

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV+LG     +R + +A LL  GF         +  +        +    ++ +E+C  +
Sbjct: 239 AVVLGEKSAVSRAEAAAKLLDQGFD---TPTAGSATVATLAPYGDTVSPNDMHDEICKKK 295

Query: 301 KEIINYNTQMKEAKDKESHFIDF-EKITLLKNKI 333
           K     +     A  K++    + EK+  +   +
Sbjct: 296 KTSEEQSEAPPAAAAKDAPKSPYQEKLDHVPTLV 329


>gi|300935769|ref|ZP_07150733.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 21-1]
 gi|300974063|ref|ZP_07172437.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           200-1]
 gi|300308960|gb|EFJ63480.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           200-1]
 gi|300459040|gb|EFK22533.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 21-1]
 gi|315285607|gb|EFU45049.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           110-3]
 gi|324015750|gb|EGB84969.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 60-1]
          Length = 347

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|51892723|ref|YP_075414.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51856412|dbj|BAD40570.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 401

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 87/347 (25%), Positives = 141/347 (40%), Gaps = 30/347 (8%)

Query: 6   VIIAMAMLSNIFPFLS-------------IAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +I A+ ++S      +                +       L+D  TG V+ E       +
Sbjct: 11  MIAALLLISGAEAAAAPRPLVDHYRDVVESPPSLWAHGAILMDAATGDVLWERNAHVRLH 70

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK++TA +        +  L   +T+SK A++ P S+   ++G   TL + +  L+
Sbjct: 71  PASTTKVLTALIALE-----RGDLDARVTVSKRAAQTPGSSMYLREGEVHTLHDLVHGLL 125

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S ND AVAIAE +  + + F   MN  ++ LG   +HF+N HG+    H +TA D+A+
Sbjct: 126 MLSGNDAAVAIAEHIAGSVEAFADLMNERAERLGARNSHFVNPHGLTHPEHLSTAYDLAV 185

Query: 173 LSWRIKTDFPQYM-----HYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGF 226
           ++     +                    +     NTN  +     GADG+KTG T A+G 
Sbjct: 186 ITRAALQNPLFAEIVAAPQKELTYEELGRKVVLYNTNRLLRGGLPGADGVKTGTTGAAGP 245

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQ 283
            ++ASA + DQ LIAV+L A +   R + SA+LL  GF N    +             + 
Sbjct: 246 CLIASATRDDQKLIAVVLNASN---RWRESAALLEWGFRNFALARLGRAGEVLVHLPVRG 302

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                VP    E                +   K           ++ 
Sbjct: 303 GKRRAVPVALREELAVVVPRKTGAVPEVQVDLKRPLRAPLRAGEVVG 349


>gi|324016991|gb|EGB86210.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           117-3]
          Length = 347

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAVNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + +    K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILPRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|225018712|ref|ZP_03707904.1| hypothetical protein CLOSTMETH_02662 [Clostridium methylpentosum
           DSM 5476]
 gi|224948440|gb|EEG29649.1| hypothetical protein CLOSTMETH_02662 [Clostridium methylpentosum
           DSM 5476]
          Length = 390

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 21/326 (6%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           I   +            L++ N+G ++ +         AS TK+MT+ +           
Sbjct: 20  IPASVQAEPGVSAKAAILIEANSGKILYQKNAQQKLPMASTTKIMTSLIALE-----SGN 74

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L    T+ +NA +   S+   + G  +T+      ++++S ND A A+A  L  + + F 
Sbjct: 75  LDEWFTVDENAIKVEGSSMGLQAGDQVTMRTLAYGMLLQSGNDAANAVAVKLAGSAEAFA 134

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY-----MHYFQI 190
           + MN  ++ +G++ +HF+   G+    HY+TA DMA L+     +               
Sbjct: 135 EKMNERAQQIGMANSHFVTPSGLDNEEHYSTAEDMAKLARTALQNDGFREICSTYQTKLE 194

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            G     +   N N  +  + G  G+KTGFT  SG  +V++A +    LIAV L A    
Sbjct: 195 YGNPPYTRWMTNHNRLLKEYEGTIGVKTGFTKKSGRCLVSAAERDGVRLIAVTLNAPSD- 253

Query: 251 TRNKVSASLLSMGFYNKTDRKK-----INYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
                  ++   GF      K         I      Q     VP    +     +++ +
Sbjct: 254 --WSDHKAMFDYGFSVVQPVKLDCDFSAISIDVVGGTQEKLGVVPLEQPQAGVLSEDVGS 311

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKN 331
              ++        ++   +   ++  
Sbjct: 312 IEKRIHLNS---FYYAPIKAGDVVGK 334


>gi|260566296|ref|ZP_05836766.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|260155814|gb|EEW90894.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
          Length = 461

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 11/333 (3%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++      L+       +      ++A+ +      ++D NTG  +     D    PAS
Sbjct: 1   MKKAAQVSLLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MT Y++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KS
Sbjct: 61  LTKMMTLYMLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND+A A+ E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL  
Sbjct: 121 ANDVAAAVGEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGM 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            ++  FP+   YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S    
Sbjct: 181 ALRRHFPREFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLD 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
            + L+AV++G     +R+   A L+                  +       +E P +   
Sbjct: 241 GRRLVAVVMGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVAS 294

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +   + +           +D  +  I    I  
Sbjct: 295 IDLPKAKRAPVPVARIAVEDIINAEIGEGDIDQ 327


>gi|229170862|ref|ZP_04298467.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus MM3]
 gi|228612597|gb|EEK69814.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus MM3]
          Length = 417

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 73/359 (20%), Positives = 138/359 (38%), Gaps = 33/359 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +   SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   
Sbjct: 1   MLLPYSNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           + + K      I +S+ A +        N   + G   T+    + + + SAN   +A+A
Sbjct: 61  VDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGIYTVKELYEAMAIFSANGATIALA 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDM 170
           E++   E  FV+ MN+ SK LGL    F+N+ G+                  +  +A+D+
Sbjct: 121 EAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDV 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----VGTFLGADGMKTGFTC 222
           A L+  +  D+P+ +   +I   E + +K      N NW     V  + G DG+KTG T 
Sbjct: 181 ATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLVKEYDGVDGLKTGSTP 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G     +  +     I+V++       R   +  L   GF N   ++          Q
Sbjct: 241 EAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYKKDSSVKGQ 300

Query: 283 QNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           + +  E            + V     +      + +  +  +      +K   L   + 
Sbjct: 301 ETVRVENAKDKDVAVQTKQAVSLPVPKGSKDVYKTELKEANKGQEAPIKKGAALGQMVI 359


>gi|117624214|ref|YP_853127.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli APEC O1]
 gi|301019170|ref|ZP_07183370.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 69-1]
 gi|301050040|ref|ZP_07196954.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           185-1]
 gi|301648516|ref|ZP_07248240.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           146-1]
 gi|309797269|ref|ZP_07691664.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           145-7]
 gi|331658091|ref|ZP_08359053.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA206]
 gi|115513338|gb|ABJ01413.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b)
           [Escherichia coli APEC O1]
 gi|300298224|gb|EFJ54609.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           185-1]
 gi|300399363|gb|EFJ82901.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 69-1]
 gi|301073419|gb|EFK88225.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           146-1]
 gi|308119144|gb|EFO56406.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           145-7]
 gi|320198701|gb|EFW73301.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli EC4100B]
 gi|323183797|gb|EFZ69188.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli 1357]
 gi|323951763|gb|EGB47637.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H252]
 gi|323972841|gb|EGB68040.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TA007]
 gi|324008953|gb|EGB78172.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 57-2]
 gi|326338366|gb|EGD62194.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           1044]
 gi|326347113|gb|EGD70846.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli O157:H7 str.
           1125]
 gi|331056339|gb|EGI28348.1| D-alanyl-D-alanine carboxypeptidase DacD (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 6b)
           (PBP-6b) [Escherichia coli TA206]
          Length = 347

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|260881011|ref|ZP_05403380.2| serine-type D-Ala-D-Ala carboxypeptidase [Mitsuokella multacida DSM
           20544]
 gi|260850172|gb|EEX70179.1| serine-type D-Ala-D-Ala carboxypeptidase [Mitsuokella multacida DSM
           20544]
          Length = 412

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 125/318 (39%), Gaps = 14/318 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D  +G VI E   D    PAS TK+MT  +           +   +T+S
Sbjct: 67  QNLTARSAVVIDAASGQVIYERNKDERRFPASTTKIMTLILALEHS-----NMDDMVTVS 121

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            NA+    S    + G  + + + L  +++ S ND  VA+AE +  +  KF   M   + 
Sbjct: 122 SNAAGTEGSTLWLEAGEKIRMGDLLYGMMMHSGNDATVAVAEHIAGSVDKFAAMMTAKAH 181

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK----TDFPQYMHYFQIKGLEIKGKK 199
            +G   T+F NA+G+ +  HYTTA D+A ++         +            ++     
Sbjct: 182 EIGAVNTNFANANGLPREDHYTTAYDLAKITAYGYRVPGFEQIVSTKEIDFDWVKDPSHH 241

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +  + GA+G+KTG+T A+G  +V+ A +    L+AV+L ++        S  L
Sbjct: 242 LRNENQMLWLYRGANGVKTGYTDAAGRCLVSGAKKDGLQLVAVVLDSV---YMWNDSIKL 298

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN--ISEEVCTTQKEIINYNTQMKEAKDKE 317
           L  GF +      +       Y            +      T  ++       K   + +
Sbjct: 299 LDYGFAHVEPDTIVKEGDTVGYANVAGGTGRKLPLKAAETLTLAKLKGEGEAYKTRIEAD 358

Query: 318 SHFIDFEKITLLKNKITK 335
                 ++   +   + +
Sbjct: 359 DLRAPIKEGDTVGRLVVE 376


>gi|160942970|ref|ZP_02090208.1| hypothetical protein FAEPRAM212_00447 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445664|gb|EDP22667.1| hypothetical protein FAEPRAM212_00447 [Faecalibacterium prausnitzii
           M21/2]
          Length = 410

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 137/325 (42%), Gaps = 6/325 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            +          T       L+D  +G V+ E   D     AS+TK+MT  + F  +   
Sbjct: 44  AAQTLTVTPPQLTLPCRAAILIDQTSGTVLYEMNADQTMPIASITKVMTLLLTFEAVHAG 103

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  + T + +S++A     S    + G   TLD  LK + V SAND AVA+AE +  +E 
Sbjct: 104 RLTMDTAVPVSEHAYHMGGSQIWLEPGEQFTLDEMLKAVCVSSANDAAVAVAELVGGSEP 163

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--YMHYFQI 190
            FVQ MN  +  LG+  T F NA G+   GH +TARD+AI+S  I T  P+  +      
Sbjct: 164 AFVQQMNARAAELGMEHTTFRNACGLDTEGHLSTARDVAIMSRTILTTCPEVLHYTGIWT 223

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
             L     +  NTN  +  + G  G+KTG T  +G  I ASA +   +LIAV+LGA    
Sbjct: 224 DTLRGGQTQLVNTNKLLRRYNGITGLKTGTTGGAGVCITASATRDGLNLIAVVLGAPSSK 283

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV----CTTQKEIINY 306
            R + + +LL  GF             +    +   +    +  +      T      + 
Sbjct: 284 ERFEAATTLLDYGFAAYRAAPVPLPQERPLQLKVKGSTEETVLLDYAALPATALLPAESA 343

Query: 307 NTQMKEAKDKESHFIDFEKITLLKN 331
                + +  ++      +   +  
Sbjct: 344 GQLTVQLELPDTLEAPVTRGQTVGK 368


>gi|172056057|ref|YP_001812517.1| Serine-type D-Ala-D-Ala carboxypeptidase [Exiguobacterium sibiricum
           255-15]
 gi|171988578|gb|ACB59500.1| Serine-type D-Ala-D-Ala carboxypeptidase [Exiguobacterium sibiricum
           255-15]
          Length = 415

 Score =  179 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 23/352 (6%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++   +    ++           +     +   Y ++D  TG ++     D    PAS+
Sbjct: 1   MKRLFTLFLSVLILTAGGQPMTGHAETPDIQAESYIMVDAVTGKILLAEQADLALPPASM 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKLMT Y+V   +++KK      +  S+     ++ P       + +T T+        +
Sbjct: 61  TKLMTLYLVRQQIEQKKLSWNQTVRPSEKVLKLAKTPGIARLPIRKTTYTIRELYDAAFI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------HYTTA 167
           KSAND AV +AE +  TEK+FV+ MN T+  LG+  T + NA G+          +  TA
Sbjct: 121 KSANDAAVLLAEVMAGTEKQFVERMNETAVALGMEDTEYANASGLDAVDATLPGTNLMTA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----WAVGTFLGADGMKTGFTCA 223
            D+++L  R   D+P  +   +   + I G+K  N+N         + G  GMKTG T  
Sbjct: 181 MDISLLIIRYIQDYPDVLDVTKRSFITINGEKVENSNKMLPRQPYAYSGMRGMKTGTTDL 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           +G+   + A +G+ +L++V++       R   +  LL  GF             +     
Sbjct: 241 AGYCFASVATRGNLTLVSVVMRTTSDKARFAETKKLLDYGFSFFEPLTYYGKGEQIKGVL 300

Query: 284 NLSNEVPNISEEVC------TTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +     +  + V       T  K     +T + +    E+   + E I  +
Sbjct: 301 PIRGAKQSRYDVVTKTALYVTVLKNQAKPHTPVFQFSKAEAPLKEGEIIGTV 352


>gi|92112285|ref|YP_572213.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chromohalobacter
           salexigens DSM 3043]
 gi|91795375|gb|ABE57514.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chromohalobacter
           salexigens DSM 3043]
          Length = 413

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 92/262 (35%), Positives = 148/262 (56%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+++ +  ++     ++ A  N      ++DT  G V+  +  D P  PASLTK+MT Y+
Sbjct: 15  LILLVVFAIALCTLSVAEAAPNPRYASIVIDTENGAVLHADNADAPRYPASLTKMMTLYL 74

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  +++    L + + +S+ A+  PPS      G T+ +++A+ +LIVKSAND+A  +A
Sbjct: 75  LFEAIEDDTLSLESRLPVSQYAAAKPPSKMGVTPGETVKVEDAINILIVKSANDVAAVVA 134

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +E  F   M + ++ LG+  T F NA G+   G  TTARDMAIL+ R+  DFP Y
Sbjct: 135 EGLAGSESVFAGQMTDKARALGMMDTTFRNASGLPDAGQVTTARDMAILALRLMQDFPGY 194

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF       +GK+Y   N  + ++ GADG+KTG+  ASGFN+  SA+   + +++V++
Sbjct: 195 YPYFGKTQFTWQGKRYQGHNRLLDSYAGADGLKTGYIRASGFNVATSAVHDGRRILSVVM 254

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
           G     +R+     LL  GF  
Sbjct: 255 GGFTAQSRDAHMRELLDSGFAR 276


>gi|307321507|ref|ZP_07600902.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|306892814|gb|EFN23605.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
          Length = 500

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 91/252 (36%), Positives = 136/252 (53%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I +A L  +  F + A  N      ++D  TG V+     D    PASLTK+MT Y+ F 
Sbjct: 31  IFLAGLIAVLTFSAPAFANSKYAGIVVDAKTGKVLYGEDADQLRYPASLTKMMTLYLTFE 90

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L+  +   +TP+  SK AS  PPS    + G ++T++ A+  L+ +SAND A A+ E L
Sbjct: 91  ALEAGRISKSTPVPFSKKASAEPPSKLGVRAGRSITVEQAILSLVTRSANDAATALGELL 150

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E++F + M N ++ LG++ T + NAHG+      TTARD A L   ++  FPQY  Y
Sbjct: 151 GGSEQRFARMMTNKARALGMTRTTYRNAHGLPNSEQRTTARDQARLGIALRQHFPQYYDY 210

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +      +   N N  +G   G DG+KTG+T ASGFN+V SA    +S++AV++G  
Sbjct: 211 FSTRSFRFGKQTIGNHNRLLGNVRGVDGIKTGYTRASGFNLVTSAQLDGRSIVAVVMGGT 270

Query: 248 DRNTRNKVSASL 259
               R+     L
Sbjct: 271 SGGARDAQMRKL 282


>gi|195970177|ref|NP_385517.2| hypothetical protein SMc00996 [Sinorhizobium meliloti 1021]
 gi|307309177|ref|ZP_07588848.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
 gi|187904171|emb|CAC45990.2| Penicillin-binding protein [Sinorhizobium meliloti 1021]
 gi|306900323|gb|EFN30939.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
          Length = 500

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 91/252 (36%), Positives = 136/252 (53%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I +A L  +  F + A  N      ++D  TG V+     D    PASLTK+MT Y+ F 
Sbjct: 31  IFLAGLIAVLTFSAPAFANSKYAGIVVDAKTGKVLYGEDADQLRYPASLTKMMTLYLTFE 90

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L+  +   +TP+  SK AS  PPS    + G ++T++ A+  L+ +SAND A A+ E L
Sbjct: 91  ALEAGRISKSTPVPFSKKASAEPPSKLGVRAGRSITVEQAILSLVTRSANDAATALGELL 150

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E++F + M N ++ LG++ T + NAHG+      TTARD A L   ++  FPQY  Y
Sbjct: 151 GGSEQRFARMMTNKARALGMTRTTYRNAHGLPNSEQRTTARDQARLGIALRQHFPQYYDY 210

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +      +   N N  +G   G DG+KTG+T ASGFN+V SA    +S++AV++G  
Sbjct: 211 FSTRSFRFGKQTIGNHNRLLGNVRGVDGIKTGYTRASGFNLVTSAQLDGRSIVAVVMGGT 270

Query: 248 DRNTRNKVSASL 259
               R+     L
Sbjct: 271 SGGARDAQMRKL 282


>gi|170760218|ref|YP_001787185.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407207|gb|ACA55618.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum A3
           str. Loch Maree]
          Length = 407

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 92/377 (24%), Positives = 151/377 (40%), Gaps = 42/377 (11%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIA-----------------------ETNKLPYYT 32
           M++     F VII +  +  +F     A                                
Sbjct: 1   MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKKEEKAEDKDSNKEGDSDVDAKSAL 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L++  TG VI E      + PAS+TK+MT  +    +   K  LT  +TIS+NA +   S
Sbjct: 61  LIEPTTGKVIYEKNSHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                 G   T+++ LK + + S ND AVA+ E L  +E+ FV+ MN+ ++ L +  T F
Sbjct: 121 TMLLDVGEERTVEDLLKGIAIASGNDAAVAMGEYLAGSEEAFVKMMNDRAQKLNMKDTSF 180

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            N  G+   GH T+A D++I+S  +            +   I           N N  V 
Sbjct: 181 KNCTGLSAEGHKTSAYDISIMSRELLKHKQILKYTGTYMETISEGRKSPIGLVNHNKLVR 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            F G DG+KTGFT  + + I A+A +    ++AVI+GA     RNK ++ L++ GF    
Sbjct: 241 FFKGCDGLKTGFTDEAKYCISATAKKDGVRMLAVIMGAPTYKIRNKDASKLMNYGFSKFE 300

Query: 269 DRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK------EAKDKES 318
            +  +             +     +    EE+    ++        K      + + K +
Sbjct: 301 CKTLVKKGDVISKVPLNSKGDKYFMAKSCEELDAIIEKGKKTKITNKCIIDENKKEYKIN 360

Query: 319 HFIDFEKITLLKNKITK 335
             +   +     N I K
Sbjct: 361 EEVGICEFYSDGNLIGK 377


>gi|83949599|ref|ZP_00958332.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius nubinhibens ISM]
 gi|83837498|gb|EAP76794.1| D-alanyl-D-alanine carboxypeptidase [Roseovarius nubinhibens ISM]
          Length = 403

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 8/324 (2%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              + A   +     ++D  TG V+     D P  PAS++KLMT YV F  +++ +  +T
Sbjct: 22  TQAARAFDTRATAAYVVDVGTGTVLLAKNADQPLPPASMSKLMTLYVTFEAIRDGRLSMT 81

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--EKKFV 135
             + +S +A+ Y  S    + G  +++++ L+ +IV S ND  V +AESL     E  F 
Sbjct: 82  ETLPVSAHAARYGGSTLFLQAGERVSVEDLLRGIIVLSGNDACVVLAESLSPDGTEAGFA 141

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + M   ++N+G++ + F N++G    GH  + RD+ +L+ ++  DFP++   F  +    
Sbjct: 142 RFMTRRAQNMGMTNSAFTNSNGWPAPGHRMSMRDLGLLARKLIEDFPEFYPMFAEEEFLF 201

Query: 196 KG---KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                +   N N  +G  +GADG+KTG T  +G+ +V SA+Q  + +I VI G      R
Sbjct: 202 DEKESQNRYNRNPLLGLGIGADGLKTGHTAEAGYGLVGSAVQNGRRVIFVISGLASAEAR 261

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
            + + ++++  F    +++ +   ++          +  V   + E   T    ++    
Sbjct: 262 AEEAEAIVNWAFRQFAEQQVVRGGVELARAKVWMGDATTVGLEAAEDVRTLMPAMSAGPL 321

Query: 310 MKEAKDKESHFIDFEKITLLKNKI 333
             E           ++   L   +
Sbjct: 322 KAEVVYTGPIEAPVKQGDKLAELV 345


>gi|182677354|ref|YP_001831500.1| Serine-type D-Ala-D-Ala carboxypeptidase [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182633237|gb|ACB94011.1| Serine-type D-Ala-D-Ala carboxypeptidase [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 538

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 100/255 (39%), Positives = 152/255 (59%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +        ++ +T +     ++D  +G+VI ++    PW PASLTKLMT YV    +++
Sbjct: 47  LAIAAVATTTLTDTAQAAPGLVIDLASGNVIYQSEATRPWYPASLTKLMTLYVALQAVRD 106

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +    TP+ +S  A   PPS   FK G+ +TL NALK+L+VKSANDIA+ +AE +  + 
Sbjct: 107 HRIGFDTPLVVSARAHAMPPSKMGFKPGTQVTLGNALKMLMVKSANDIAITVAEGIAGSV 166

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + F + MN  + +LGL  +HF+N +G+    HY++ARDMA+L+  +   FPQY   + I 
Sbjct: 167 EAFAEDMNAQAADLGLRQSHFVNPNGLHNEQHYSSARDMALLARALYLRFPQYASLYNIG 226

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
            L +  +   N N  +G + G DGMKTG+TC +GFNIVASA Q  + +I V+LG+ +  T
Sbjct: 227 ALRLGNQIIQNHNNLLGRYPGVDGMKTGYTCTAGFNIVASAEQSGRRVIVVVLGSPNVET 286

Query: 252 RNKVSASLLSMGFYN 266
           R   +A+L    F N
Sbjct: 287 RTIKAAALFDRAFSN 301


>gi|114328315|ref|YP_745472.1| D-alanyl-D-alanine serine-type carboxypeptidase [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316489|gb|ABI62549.1| D-alanyl-D-alanine serine-type carboxypeptidase [Granulibacter
           bethesdensis CGDNIH1]
          Length = 456

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 89/259 (34%), Positives = 143/259 (55%), Gaps = 1/259 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            +   +  F   + A+         ++D NTG V++ + PD   +PASLTK+MT Y++F 
Sbjct: 67  FLTTAATGFSTTAYAQIGSERYSSIVVDANTGAVLSASSPDELRHPASLTKMMTLYMLFE 126

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L++++  L   + +S +A+   PS      G+ +T++ A+  L+ KSAND A A+ E L
Sbjct: 127 ALRDRRVSLDDLVPVSGHAASMSPSKLGLVPGTRLTVEEAILGLVTKSANDAAAAVGEML 186

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E++F Q M   ++ LG++ T F NA G+      +TA DMA+L+  +  DFP    Y
Sbjct: 187 GGSEEQFAQMMTIRARALGMTRTVFRNASGLPDPDQISTAHDMAVLARHLILDFPSEYRY 246

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F            PN +  +  + GADG+KTG+T ASG N+V SA++ D  LI V+ GA 
Sbjct: 247 FSTPSFVFHRHVIPNHDRMLSIYPGADGLKTGYTNASGLNLVTSALRSDVRLIGVVFGAS 306

Query: 248 DRNTRNKVSASLLSMGFYN 266
           ++  R+   A+LL+ GF  
Sbjct: 307 NKYERDSHMAALLNAGFRQ 325


>gi|300824757|ref|ZP_07104862.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           119-7]
 gi|300920250|ref|ZP_07136696.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           115-1]
 gi|301018907|ref|ZP_07183137.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           196-1]
 gi|299882461|gb|EFI90672.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           196-1]
 gi|300412752|gb|EFJ96062.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           115-1]
 gi|300522744|gb|EFK43813.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           119-7]
 gi|323172598|gb|EFZ58232.1| D-alanyl-D-alanine carboxypeptidase dacD [Escherichia coli LT-68]
          Length = 347

 Score =  179 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|229133395|ref|ZP_04262223.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST196]
 gi|228650068|gb|EEL06075.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST196]
          Length = 442

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 139/375 (37%), Gaps = 42/375 (11%)

Query: 2   RQFLVI-----IAMAMLSNIFPFLS---IAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I     +  +++       +    A   +     L++ N+G ++ +   D     
Sbjct: 12  KRFIAIGTVLTLFCSIVVTSGSASAETVPALDVEAGSAILVEANSGKILYQKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPE 191

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQKGGKYPIDMTNFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVEKNGMRLISVVIKANSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +     +  
Sbjct: 312 FEVKKVYGKDSVVKGHETVRVANAKDKDIVVQTKQAVSLPMPKGNKDVYKKEFKVSNKEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISQMII 386


>gi|303248189|ref|ZP_07334453.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           fructosovorans JJ]
 gi|302490453|gb|EFL50362.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           fructosovorans JJ]
          Length = 359

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 85/243 (34%), Positives = 134/243 (55%), Gaps = 1/243 (0%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
               +    L D NTG ++ E  PD    PASLTK++T Y++F  +++ K      + +S
Sbjct: 89  PRLTVKSAMLWDMNTGGLLYEQNPDVQIPPASLTKILTLYIIFDAIRQGKLHPWDVVEVS 148

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTS 142
           + A+    SN   + G ++ +   +K + V SAND  +A+AE L       FV  MN+T+
Sbjct: 149 QRAASQGGSNMRLRAGESVKVTELIKGIAVASANDACMAMAEYLENGNPDAFVNVMNDTA 208

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           + LG++ + FMN +G+   G  TTARDM  L+      FP+ +    ++      ++  N
Sbjct: 209 QRLGMTRSRFMNPNGLPADGQVTTARDMLRLASAYLEQFPKALTIHSMQFFTHNNRQRHN 268

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +G + GADG+KTGF CASG+NI+A+A +GD  LI V+LG+     R + ++ LL  
Sbjct: 269 ANALLGRYEGADGLKTGFVCASGYNIIATAKRGDTRLIGVVLGSRSAGVRLRETSKLLDK 328

Query: 263 GFY 265
           GF 
Sbjct: 329 GFK 331


>gi|300903877|ref|ZP_07121778.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 84-1]
 gi|301307141|ref|ZP_07213170.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           124-1]
 gi|300404135|gb|EFJ87673.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 84-1]
 gi|300837656|gb|EFK65416.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           124-1]
 gi|315253360|gb|EFU33328.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 85-1]
          Length = 347

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|317486130|ref|ZP_07944975.1| D-alanyl-D-alanine carboxypeptidase [Bilophila wadsworthia 3_1_6]
 gi|316922615|gb|EFV43856.1| D-alanyl-D-alanine carboxypeptidase [Bilophila wadsworthia 3_1_6]
          Length = 339

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 87/311 (27%), Positives = 155/311 (49%), Gaps = 12/311 (3%)

Query: 5   LVIIAMAMLSNIFPFL-----SIAETNKL-------PYYTLLDTNTGHVIAENYPDHPWN 52
            ++IA +++            + A  +             L+D  TG ++    PD    
Sbjct: 20  FLLIAASLVLAPAAEARNARKAHAAQSTASRQILNVRSAVLMDARTGKILYSQNPDVRIP 79

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PASLTK+M+  V F  ++  K  L+  I +S++A+    S    + G  ++L+  L  + 
Sbjct: 80  PASLTKIMSMMVTFDAIRSGKVKLSDQIRVSRHAARQGGSRMGLRAGERVSLNRLLMGMA 139

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V S ND ++A+AE +  + + FV+ MNN ++ +G+S++ F   +G+   G YTTARDMA 
Sbjct: 140 VSSGNDASMAVAERVGGSGRAFVKMMNNKARQIGMSSSTFKTPNGLPAAGQYTTARDMAR 199

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L +    + P  + Y +++ L+ +G    N N  +G   GADG+KTG+  ASG+NI+++ 
Sbjct: 200 LGYVYLKNNPSALQYHRVRVLKHRGAVTTNKNPLLGACPGADGLKTGWVTASGYNIISTV 259

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +G+  LIAVILGA     R+     L+  GF ++T+   +   +  +   N +      
Sbjct: 260 RRGNTRLIAVILGADSAGLRSHEVRRLVEAGFKSRTNGITVASALTKYSYPNKATASSVK 319

Query: 293 SEEVCTTQKEI 303
             ++   +   
Sbjct: 320 KHKIRRNKATA 330


>gi|327438154|dbj|BAK14519.1| D-alanyl-D-alanine carboxypeptidase [Solibacillus silvestris
           StLB046]
          Length = 445

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 144/370 (38%), Gaps = 40/370 (10%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++I++M  ++      +      +    L+D +TG ++ E   +     AS+TK+MT Y+
Sbjct: 17  ILILSMLAMTPAKTHAATDLGLTVDAAILIDADTGKILYEQNAETALGIASMTKMMTEYL 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +   +KE          +++   +   +    N   +   T T+    + + + SAN   
Sbjct: 77  LLDAIKEGSISWDQEYNVTEYTYKVSQNRLLSNVPLRADGTYTIKELYEAMAIYSANAAT 136

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYTT 166
           +AIAE++  TEK+F++ M+  ++ LGL    F+NA G+                  +   
Sbjct: 137 IAIAETIAGTEKEFLKLMDKKAEELGLENYKFVNATGLNNADLQGMHPEGTGEKDENVMP 196

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMK 217
           AR +A L++ +  D P+ +   +I     +          N N+     V  + G DG+K
Sbjct: 197 ARSVAKLAYNLLKDHPEMLETAKIPKKVFREGTSDAISMSNWNFMLPGLVYEYEGVDGLK 256

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNKTDRK 271
           TG T  +G     +A +GD  LIAV++      G      R   +A L   GF   +  +
Sbjct: 257 TGTTDFAGHTFTGTAKRGDTRLIAVVMKAVDSNGVGSYKARFDATAKLFDYGFGQFSKVE 316

Query: 272 KI-------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
            +               +    +    + E V    K     +       DK+      E
Sbjct: 317 LLPGNYVFEEQKSIPVIKGKEDSVKIAVKEPVSVMVKTSEKDSYVPTLTLDKKEIEAGVE 376

Query: 325 KITLLKNKIT 334
           K  ++   + 
Sbjct: 377 KDQVVGQAVL 386


>gi|300898616|ref|ZP_07116943.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           198-1]
 gi|300956273|ref|ZP_07168579.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           175-1]
 gi|405953|gb|AAA16416.1| yeeC [Escherichia coli]
 gi|300316896|gb|EFJ66680.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           175-1]
 gi|300357712|gb|EFJ73582.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           198-1]
          Length = 347

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|118444410|ref|YP_878580.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
 gi|118134866|gb|ABK61910.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
          Length = 410

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 163/354 (46%), Gaps = 25/354 (7%)

Query: 1   MRQFLVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+ L  I + +++          +    T       L+D NTG ++     D P+ PAS
Sbjct: 1   MRKLLTFIWIFIITFSVIVYDTKAIDTPPTVSADGVVLMDKNTGQILYSKNLDSPYPPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +           L   +TI KNA++   S     +G  +T+ + L  L+++S
Sbjct: 61  TTKIMTALLALEKC-----NLDDVVTIGKNATDIDGSKIYIFEGEKLTIRDLLYSLLLQS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND AVA+AE +  + ++FV+ MN  +K LG   T+F+N HG+    H T+ARD+A++  
Sbjct: 116 ANDCAVALAEHISGSTQEFVKLMNTRAKELGCKNTNFVNPHGLYDDKHRTSARDLALILR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG-----------TFLGADGMKTGFTCAS 224
            +               +     K PN  +               + G +G KTG+T  S
Sbjct: 176 ELSKHEDFKKIATTQVYVINPTNKEPNKRFIGNKDKLVLKRSKCYYEGCEGGKTGYTIQS 235

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF-YQQ 283
             + VA+A + ++SLIAV+L    ++T      +L + GF N T  K  +     + Y+ 
Sbjct: 236 KHSFVATATRDNKSLIAVLLH-DAKHTYWDDVINLFNFGFSNYTREKLYSKNQCLYNYKI 294

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL--KNKITK 335
           N ++ +P ++ E     ++  + +    +  +   +   F+K  ++   N + K
Sbjct: 295 NDNSSIPVLATEDFYYLRKNGDKDVPELKVNNAPLNNKFFKKGDIILTGNIVYK 348


>gi|227821091|ref|YP_002825061.1| putative D-alanyl-D-alanine carboxypeptidase [Sinorhizobium fredii
           NGR234]
 gi|227340090|gb|ACP24308.1| putative D-alanyl-D-alanine carboxypeptidase [Sinorhizobium fredii
           NGR234]
          Length = 417

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 4/261 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR   + +A  +        + A         ++D  +G V++    D    PASLTK+M
Sbjct: 1   MRNLQIALAAIVAFVAATASAFA----GSASFVIDARSGRVLSAENADELNYPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L   +    TP+ +SK A+  PP+    K GS +T++ A+  +I+ SAND A
Sbjct: 57  TLYLTFEALHRGEINWQTPVPMSKEAARKPPTKLGLKPGSAITVEEAVYGMIIHSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE L  +E  F Q M   ++ LG++ T F+NA G+      TTARDMA L   +  D
Sbjct: 117 AAMAEKLGGSEAAFAQMMTAKARRLGMTRTVFVNASGLPASQQVTTARDMAKLGMALLRD 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F  +    +G+     N  +  + G DG+KTG+T ASGFN+V++   G++ +I
Sbjct: 177 FPREYRLFSAQSFNFRGRVVRGHNKLMYRYDGMDGIKTGYTNASGFNLVSAVRDGNRRVI 236

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V+LG     +R+   A+LL 
Sbjct: 237 GVVLGGRTAKSRDNKMAALLD 257


>gi|309787902|ref|ZP_07682512.1| D-alanyl-D-alanine carboxypeptidase dacD [Shigella dysenteriae
           1617]
 gi|308924301|gb|EFP69798.1| D-alanyl-D-alanine carboxypeptidase dacD [Shigella dysenteriae
           1617]
          Length = 347

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTSGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN  + L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYVEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNIDGLKTGHTSGAGFNLMASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|260461659|ref|ZP_05809906.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259032729|gb|EEW33993.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 387

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 114/333 (34%), Positives = 180/333 (54%), Gaps = 10/333 (3%)

Query: 2   RQFLVIIAM-AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R FL + +  A++ ++    ++A         + D  +G ++        W PASL+KLM
Sbjct: 4   RHFLKLFSAGAIMLSVLAGPTLANPV-----VVFDLKSGQILQHQDAFKRWYPASLSKLM 58

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  +   +  L +PI ++K+++  PPS   FK GS M LDNALK+++VKSANDIA
Sbjct: 59  TAYVTFRAIAAGEVQLDSPIKVTKHSAAEPPSKMGFKPGSVMRLDNALKMMLVKSANDIA 118

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+ E++  ++  F + MN  +  LG++ THF+N +G+     YTTARD+A+L   I+ +
Sbjct: 119 MAVGENIGGSQAAFAERMNAEAVRLGMNGTHFVNPNGLYSPDQYTTARDLAVLVMAIRRE 178

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  +F I+GL +  K  PN N  +G + GADGMKTGF C SGFN++ SA +  ++L+
Sbjct: 179 FPQYAPWFSIEGLAVGKKAIPNYNLLIGRYPGADGMKTGFVCPSGFNMIGSATRNGRTLV 238

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV+LG     +R + +A LL  GF         +  +        +    ++ +EVC  +
Sbjct: 239 AVVLGEKSAVSRAEAAARLLDQGF---GAPAAGSATVATLAPYGDTVSPNDMHDEVCKKK 295

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                       AKD         K+  +   +
Sbjct: 296 TPEEQSEAPPALAKDVPKSPYQV-KLDHVPTLV 327


>gi|154245869|ref|YP_001416827.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xanthobacter
           autotrophicus Py2]
 gi|154159954|gb|ABS67170.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xanthobacter
           autotrophicus Py2]
          Length = 508

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 105/264 (39%), Positives = 155/264 (58%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R   + +A A+L        +    +     L++ +TG VI +     PW+PAS+TKLMT
Sbjct: 20  RGLCLGLAAAVLGVGLAGSFLVHPAQANPVLLVEADTGRVIEQKEAGRPWHPASVTKLMT 79

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            YV  + +K  +  L TP+T+S  A+   PS   FK G+ +TLDNA+K+++VKSAND+A 
Sbjct: 80  VYVALNAVKNGRLTLDTPLTVSAAAASQQPSKMGFKPGTVVTLDNAMKMVLVKSANDMAW 139

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            + E +  +   FV  MN T+ +LG+S THF N +G+      TTARD+AIL+  I   F
Sbjct: 140 VVGEGVAGSMPAFVAEMNATAAHLGMSGTHFENPNGLPDPDQITTARDLAILARAIIYHF 199

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P++   F+I  ++I      N N  +  + GADGMKTGF C SG+N+VA+A +G++ LIA
Sbjct: 200 PEHEALFRIPAIKIGKAVLRNYNRLIDRYPGADGMKTGFVCGSGYNLVATATRGNKRLIA 259

Query: 242 VILGALDRNTRNKVSASLLSMGFY 265
           VILGA     R + +A +   GF 
Sbjct: 260 VILGARSGTARTEQAALMFEKGFQ 283


>gi|160935972|ref|ZP_02083346.1| hypothetical protein CLOBOL_00869 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441214|gb|EDP18931.1| hypothetical protein CLOBOL_00869 [Clostridium bolteae ATCC
           BAA-613]
          Length = 549

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 31/308 (10%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++FL + I + + + +FP  + A          +     ++D++TG V+     D P+ 
Sbjct: 6   MKRFLMLFICLCLCAGLFPITAAAAPEWPSDVSIQADAGIVMDSDTGTVLYGKNMDQPYY 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALK 109
           PAS+TK++TA +V          L   +T S +         S++   +G  +T+ + L 
Sbjct: 66  PASITKILTALIVLEQCD-----LNEMVTFSHDDVYNVEAGSSSAGIDEGDVLTVRDCLY 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L++ SAN+ A A+A  +  + + F Q MN  +++LG + +HF N  G+    HYTTA D
Sbjct: 121 ALMLASANESANALACHVSGSREAFAQLMNEKARSLGCTGSHFNNPSGLNDENHYTTAHD 180

Query: 170 MAILSWRIKTDFPQ------------YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           MA+++     +                       G      K  N N AV  + GA   K
Sbjct: 181 MALIARAAIQNPEFLTINGTRSYQLAPTKRTPEGGYVANHHKMLNKNEAVY-YPGAFAGK 239

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG+T  +G  +V  A + D +LIAV+L      +    + +L   GF N    + ++Y  
Sbjct: 240 TGYTSLAGNTLVTCARKNDMTLIAVVLN--GHQSHYSDTKALFDFGFRNFQSLRTVDYET 297

Query: 278 KDFYQQNL 285
           +    +N 
Sbjct: 298 RYKSLEND 305


>gi|328543443|ref|YP_004303552.1| D-alanyl-D-alanine carboxypeptidase family [polymorphum gilvum
           SL003B-26A1]
 gi|326413187|gb|ADZ70250.1| D-alanyl-D-alanine carboxypeptidase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 486

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 97/268 (36%), Positives = 148/268 (55%), Gaps = 7/268 (2%)

Query: 1   MRQFLVIIAM------AMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNP 53
           MR  + +  +       +L  +F  L         Y   ++D  TG  +     D P  P
Sbjct: 1   MRSLVSVWTLPRIAKALLLIGLFASLPSIAQANAKYAGIVVDAKTGKTLYAASADEPRYP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTK+MT YVVF  L+ ++  L TP+ +S  A+  PPS    K GST+++ +A+  LI 
Sbjct: 61  ASLTKIMTLYVVFEELEARRLSLDTPLKVSAYAAGQPPSKIGLKPGSTISVKDAILALIT 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           KSAND+AV +AE++  +E +F + M  T++ +G++ T F N HG+   G  TTARDMA L
Sbjct: 121 KSANDVAVVVAENIGGSEARFAERMTRTARQIGMTRTTFRNPHGLPNSGQRTTARDMAQL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              I+  FP Y  YF+ +    +G+ Y N N  +G   G DG+KTGF  ASGFN+V S  
Sbjct: 181 GRAIQERFPSYYGYFKTRSFAYRGRTYGNHNKLLGHVAGVDGIKTGFIRASGFNLVTSVN 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLS 261
           +  + ++AV++G     +R+     L++
Sbjct: 241 RDGRHVVAVVMGGQTGRSRDAQMVKLIN 268


>gi|239832000|ref|ZP_04680329.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
 gi|239824267|gb|EEQ95835.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
          Length = 398

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 89/336 (26%), Positives = 148/336 (44%), Gaps = 11/336 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + +  +         +  A   K P   LLD  +G V+     + P  PASL KLMTA V
Sbjct: 18  ISVAVLVPAICSPAPVDAAFVTKAPQVLLLDDRSGTVLLSKNANVPIPPASLAKLMTAEV 77

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  L++    L T   +S+NA          S    +  S+ T+ + L+ +IV++AND 
Sbjct: 78  VFEALEKGLTTLDTAYPVSENAWRTGGAPSGTSTMFARIKSSPTVADLLQGMIVQAANDG 137

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ +AE L  +E+ F + MN+ ++ LGL+A+ F+N+ G+   G   + +D+  L+  I+T
Sbjct: 138 AIVLAEGLAGSERAFAERMNDRARELGLAASRFVNSTGLPAEGQTVSLQDLVRLAQHIRT 197

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             P+Y  Y+             N N  +   +GADGM TGFT ASGF +V SA Q  + L
Sbjct: 198 AHPEYYKYYAQPAFTWNNIMQRNRNPLLRLDVGADGMGTGFTEASGFALVGSAEQNGRRL 257

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI------S 293
              + G      R + +  LL  G     D             Q     + ++       
Sbjct: 258 YLAMSGLSSVKEREEEAKRLLQWGMTAFDDVLLYPPNEIIGEAQVFGGALAHVPLKVKDR 317

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            E+   +        ++      ++   D +++ +L
Sbjct: 318 VELLLPKNGRDRLKARIVYKGPLDAPVADDQQVGVL 353


>gi|228905810|ref|ZP_04069709.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 200]
 gi|228853818|gb|EEM98576.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 200]
          Length = 424

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/366 (19%), Positives = 144/366 (39%), Gaps = 36/366 (9%)

Query: 5   LVIIAMAML---SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ +A ++    SN       A   +     L++ N+G ++ +   D   + AS+TK+M+
Sbjct: 1   MITLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSIASMTKMMS 60

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSAN 117
            Y+V   + + K      I +S+ A +        N   + G + T+    + + + SAN
Sbjct: 61  EYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGH 163
              +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+                  +
Sbjct: 121 GATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEEN 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----VGTFLGADG 215
             +A+D+A L+  +  D+P+ +   +I   E + +K      N NW     V  + G DG
Sbjct: 181 KMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLVKEYDGVDG 240

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTG T  +G     +  +     I+V++       R   +  L   GF N   ++    
Sbjct: 241 LKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEVKQMYKK 300

Query: 276 IIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                 Q+ +  E            + +     +      + +  +  +      +K   
Sbjct: 301 GSSVKGQETVRVENAKDKDVEVQTKQAISLPVPKGSKDVYKTELKESSKGQEAPIKKGAA 360

Query: 329 LKNKIT 334
           L   + 
Sbjct: 361 LGQMVI 366


>gi|218680753|ref|ZP_03528650.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli CIAT 894]
          Length = 427

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 94/308 (30%), Positives = 147/308 (47%), Gaps = 4/308 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR  L  +    L+   P  ++A         +LD  TG V+A    D   +PASLTK+M
Sbjct: 1   MRTLLAAVLTVTLAVSAPIAALA----GSASLILDARTGKVLAAENADTLNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  LK  K    TPIT+SK A+  PP+    K G T+T+  A+  +I+KSAND A
Sbjct: 57  TLYLTFEALKRGKIAWDTPITMSKYAAARPPTKLGVKAGGTITVREAVYGMIIKSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E  F + M   ++ LG+S T F+NA G+      TTARDM+ L+  +  +
Sbjct: 117 SAMGEKLGGSESGFARMMTAKARQLGMSRTVFVNASGLPDGRQVTTARDMSTLAVALMKN 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P     F       +G+     N  +  + G DG+KTG+T ASGFN+V++   G++ ++
Sbjct: 177 YPNEYRLFSAASFNFRGRTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVV 236

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
            V+LG     +R+   A LL       +       +     ++ +         +V    
Sbjct: 237 GVVLGGRTARSRDDKMAGLLDRYLGRASSSGSAKLVASVSGREPVEVASAADDSDVPVPL 296

Query: 301 KEIINYNT 308
                 + 
Sbjct: 297 SAPRPADD 304


>gi|206971703|ref|ZP_03232653.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus cereus AH1134]
 gi|206733688|gb|EDZ50860.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus cereus AH1134]
          Length = 437

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 132/367 (35%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAMLSN---IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ I  +M+            A   +     L++ N+G ++ E   D     AS+TK+M+
Sbjct: 15  VLTIFCSMVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMS 74

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSAN 117
            Y+V   + + K      + IS+ A +     S          + T+    + + + SAN
Sbjct: 75  EYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSAN 134

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------H 163
              +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+                  +
Sbjct: 135 GATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLDEKN 194

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +ARD AIL+ R+  DFPQ ++  +I     +          N NW     +  + G D
Sbjct: 195 KMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVD 254

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N   +    
Sbjct: 255 GLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYG 314

Query: 275 YIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                              + V    + V     +      + +            +K  
Sbjct: 315 KDSVIKGHETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNTEQEAPIKKGV 374

Query: 328 LLKNKIT 334
            +   I 
Sbjct: 375 TISKMII 381


>gi|262277220|ref|ZP_06055013.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium HIMB114]
 gi|262224323|gb|EEY74782.1| D-alanyl-D-alanine carboxypeptidase [alpha proteobacterium HIMB114]
          Length = 378

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 95/343 (27%), Positives = 164/343 (47%), Gaps = 19/343 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + + II    +S      S A         L+D  +G V+ E   +   +PAS+TK+M
Sbjct: 1   MIKKIFIICFLFISV----KSSALETSAKQAYLIDVLSGEVLFEKNKEQKISPASITKIM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSAN 117
           TA V F  +K+    L     +SKNA         +        ++++N LK +I+ S N
Sbjct: 57  TAIVAFDLIKKGDLKLEEKFKVSKNAWRMSSKGFSSMFIMPNDRVSVENLLKGIIIVSGN 116

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  +A+AE +  TE++FV  MNN ++ +GLS T F N+ G+    +Y+T  D++ +S  +
Sbjct: 117 DACIALAEGIAGTEEEFVNMMNNMAEKIGLSNTRFANSSGIYDGNNYSTVEDISKMSIYL 176

Query: 178 KTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
             +FP    Y+  K               N N  +   +G DG+KTG+   SG+++ A+ 
Sbjct: 177 INNFPNLYKYYSEKKFTWDRTGGAPITQGNRNPILYKDMGGDGIKTGYLNNSGYSLAATI 236

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            + D+ +++V+ G   +N R++ +  LLS         K IN I K++  +       N+
Sbjct: 237 KKNDRRILSVVSGTDSKNARSRETVRLLSYAENRFDLLK-INKIDKNYKIKTW-----NL 290

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            ++    + +   Y T  K  K+K    ID EK  +L +++ K
Sbjct: 291 KQKTVQLELKNNIYLTIPKRKKNKLKIEIDHEK-DILSSELKK 332


>gi|312109161|ref|YP_003987477.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y4.1MC1]
 gi|311214262|gb|ADP72866.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y4.1MC1]
          Length = 450

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 134/369 (36%), Gaps = 39/369 (10%)

Query: 7   IIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
            + + +     PF +          +     L+D NTG ++ +   D     AS+TK+MT
Sbjct: 12  FLMIGLCFYFLPFHAAKAAVDPLNIEADAAILVDANTGRILYQKNIDTVLGIASMTKMMT 71

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y++   +KEK+       T S          +             ++ L    A   A 
Sbjct: 72  EYLLLEAVKEKRVKWDQQYTPSDYVYRLSQDRALSNVPLRKDGKYTIRELYEAMAIYSAN 131

Query: 122 AIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------H 163
           A   ++ +    +E+ FV+ MN  +  LGL    F+N+ G+                  +
Sbjct: 132 AATVAIAEIVGGSEQNFVKMMNEKANQLGLKGYKFVNSTGLSNEDLKGFHPEGTNQSEEN 191

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +AR +A L++ +  ++P+ +          +       K  N NW     V  + G D
Sbjct: 192 VMSARSVATLAYHLLKEYPEVLETASTPRKIFREGTDDQIKMDNWNWMLPGLVHAYEGVD 251

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-----NTRNKVSASLLSMGFYNKTD 269
           G+KTG+T  +G+    +A +     I V++ A          R + +  LL  GF N + 
Sbjct: 252 GLKTGYTEFAGYCFTGTAERNGVRFITVVMNAKSNGKSTIEARFEQTRKLLDYGFSNYSM 311

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           +K  +   +   +  L             T K +       +E   +  +  D +K+T  
Sbjct: 312 KKLYSKGYELKGKSVLPVVKGKEKSVAIATDKPLSLVVKNGEEKNYRPVYVFDKKKLTAD 371

Query: 330 KNKI--TKK 336
                  KK
Sbjct: 372 GELTAPVKK 380


>gi|83310217|ref|YP_420481.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum magneticum
           AMB-1]
 gi|82945058|dbj|BAE49922.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum magneticum
           AMB-1]
          Length = 435

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 1/262 (0%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L +IA+A+   I   ++           ++D   G V+    PD    PASLTK+MT ++
Sbjct: 12  LRLIAVALGVAIIA-VAQPAEAGRYASIVIDAENGSVLHAANPDTRSYPASLTKVMTLFL 70

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  L   +  L +  T S +A+   PS    + G  +++++ +  L+ KSAND AV  A
Sbjct: 71  LFDELDSGRIRLDSKFTTSAHAAAQSPSKLGLEPGEKISVESLILALVTKSANDAAVVAA 130

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  TE +F   M   +  LG+  T + NA G+   G  +T RD A L+  +    P Y
Sbjct: 131 EGVGGTETRFAHMMTQKAHALGMRNTVYRNASGLPDTGQVSTVRDQATLARALIRSHPGY 190

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +     G+     N  +  + GADG+KTG+  ASGFN+++SA +GD+ +I V+ 
Sbjct: 191 YKYFSTRQFVYDGQPINTHNRLMLRYQGADGIKTGYIHASGFNLISSAKRGDKRIIGVVF 250

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
           G    ++R+     LL  GF  
Sbjct: 251 GGSTASSRDNHMGQLLDKGFAK 272


>gi|307546895|ref|YP_003899374.1| serine-type D-Ala-D-Ala carboxypeptidase [Halomonas elongata DSM
           2581]
 gi|307218919|emb|CBV44189.1| serine-type D-Ala-D-Ala carboxypeptidase [Halomonas elongata DSM
           2581]
          Length = 494

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 91/235 (38%), Positives = 141/235 (60%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++DT+T  ++     D P  PASLTK+MT Y++F  L +    L   + +S  ASE 
Sbjct: 48  AGIVVDTDTSEILYAENADAPRYPASLTKMMTLYMLFERLDQGGMTLGQRLPVSATASEM 107

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
           P +    K G ++ ++ A++ LIV+SAND+AV +AE+L  +E  F + M + +  LG+S 
Sbjct: 108 PATKLWLKPGDSIPVEKAIQALIVRSANDVAVVVAEALGGSESHFARMMTSRAHELGMSN 167

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F NA G+      TTARDMA+L+ R+  DFPQY  YF +     +GK     N  + +
Sbjct: 168 TTFRNASGLPDDRQVTTARDMALLARRLMLDFPQYYPYFSLDRFTWRGKTLTGHNNLLDS 227

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
           + GADG+KTGF  ASGFN+  SA +G + +++V++G    ++R++  A+LL  GF
Sbjct: 228 YPGADGLKTGFIRASGFNVATSAKRGGRRILSVVMGGYTASSRDEHMANLLDRGF 282


>gi|241206582|ref|YP_002977678.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240860472|gb|ACS58139.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 377

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 116/317 (36%), Positives = 180/317 (56%), Gaps = 3/317 (0%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK-LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R F  +  ++ +S        + +      + L+D  TG V+        W PASLTKLM
Sbjct: 7   RLFAALRPLSFVSAATAVFLGSFSLAQANPHILVDVQTGRVLEHEEAFRKWYPASLTKLM 66

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y VF  ++  +  L TPI +SK A+  P +   FK G  +TLD+ALK+L+VKSANDIA
Sbjct: 67  TVYTVFDAIRAGQISLDTPIVMSKRAAAQPAAKMYFKPGQKLTLDSALKILMVKSANDIA 126

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  T++ FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++ D
Sbjct: 127 VAVAEAIGGTQEGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRD 186

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  YF ++G     +  P+ N  +G F GADGMKTGF CASGFN + SA +  ++L+
Sbjct: 187 FPQYAGYFSLEGFTNGQQNVPSLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRTLV 246

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           +V+LG      R   +A+LL  GF  +         ++ +       +V +IS ++C+ +
Sbjct: 247 SVVLGTDSLAARADATANLLQKGFTTQPASNDTLGSLRPYGVGQD--QVTDISADICSAK 304

Query: 301 KEIINYNTQMKEAKDKE 317
              +   T+ +  + K 
Sbjct: 305 GAKVRSETRDEVGRMKV 321


>gi|163940275|ref|YP_001645159.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163862472|gb|ABY43531.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 434

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 141/378 (37%), Gaps = 43/378 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 4   KRFITIVTVLTLFCSMAVPFGRASAETVPAIDVEAGSAILVEANSGKILYQKNADESLAI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 64  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYE 123

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------- 158
            +++ SAN   +A+AE +   E  FV+ MN+ SK   +    F+N+ G+           
Sbjct: 124 AMVIYSANGATIALAEEIAGKEVNFVKMMNDKSKEFEMENYKFVNSTGLTNHDLKGHHPE 183

Query: 159 ---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 184 GTTPDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQKGGKYPIDMTNFNWMLKGL 243

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 244 IKQYEGVDGLKTGTTPEAGDCFTGTVEKNGMRLISVVIKANSHTARFDETKKLYDYGFAN 303

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +K                      + V    + V     +      + +     +  
Sbjct: 304 FEVKKVYGKDSVVKGHETVRVANAKDKDVVVQTKQAVSLPMPKGNKDVYKKEFKVSNKEQ 363

Query: 320 FIDFEK-ITLLKNKITKK 336
               +K +T+ K  I+ K
Sbjct: 364 EAPIKKDVTISKMTISPK 381


>gi|228898767|ref|ZP_04063051.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 4222]
 gi|228860859|gb|EEN05235.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis IBL 4222]
          Length = 415

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 33/354 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 4   SNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSIASMTKMMSEYLVHEAVDKGK 63

Query: 74  AMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 I +S+ A +        N   + G + T+    + + + SAN   +A+AE++  
Sbjct: 64  LKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAG 123

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSW 175
            E  FV+ MN+ SK LGL    F+N+ G+                  +  +A+D+A L+ 
Sbjct: 124 KEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQ 183

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWA----VGTFLGADGMKTGFTCASGFN 227
            +  D+P+ +   +I   E + +K      N NW     V  + G DG+KTG T  +G  
Sbjct: 184 HLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNWMLKGLVKEYDGVDGLKTGSTPEAGDC 243

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  +     I+V++       R   +  L   GF N   ++          Q+ +  
Sbjct: 244 FTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEVKQMYKKGSLVKGQETVRV 303

Query: 288 EVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           E            + +     +      + +  +  +      +K   L   + 
Sbjct: 304 ENAKDKDVAVQTKQAISLPVPKGSKDVYKTELKESSKGQEAPIKKGAALGQMVI 357


>gi|300930715|ref|ZP_07146093.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           187-1]
 gi|301330462|ref|ZP_07223080.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 78-1]
 gi|300461436|gb|EFK24929.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           187-1]
 gi|300843583|gb|EFK71343.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 78-1]
 gi|332092389|gb|EGI97462.1| D-alanyl-D-alanine carboxypeptidase dacD [Shigella boydii 5216-82]
          Length = 347

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEAKKLLRWGQQN 240

Query: 267 KTDRKKI----NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + +        +  +  +  N      +E      +    + + K   + +     
Sbjct: 241 FTTVQILHRRKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLNGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|229053860|ref|ZP_04195297.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH603]
 gi|228721470|gb|EEL72987.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH603]
          Length = 418

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/355 (19%), Positives = 133/355 (37%), Gaps = 34/355 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 6   SNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVNEAIAKGK 65

Query: 74  AMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 + +S+ A       S          + T+    + + + SAN   +A+AE++  
Sbjct: 66  LKWDQKVKVSEYAYNISQDRSLSNVPLRNGESYTVKELYEAMAIYSANGATIALAEAVAG 125

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSW 175
            E  FV+ MN+ SK  GL    F+N+ G+                  +  +ARD+AIL+ 
Sbjct: 126 KEVDFVKMMNDKSKEFGLKNYKFVNSTGLTNKDLKGHHPEGTTPDEENKMSARDVAILAQ 185

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTCASGF 226
           R+  DFP+ +   +I     +         PN NW     +  + G DG+KTG T  +G 
Sbjct: 186 RLIQDFPKTLDIAKISKKVFREGTPDRIEMPNWNWMLKGLIKEYEGVDGLKTGSTPEAGD 245

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ--- 283
               +  +     I+V++       R   +  L   GF +   +K          ++   
Sbjct: 246 CFTGTIERNGMRFISVVIKTKSHTARFDETKKLYDYGFASFEMKKMYEKGSSVKGKETVR 305

Query: 284 ----NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                  +      + V     +      + +  +  +      +K   L   + 
Sbjct: 306 VENAKDKDVAAQTKQAVSLPVPKGSKDVYKTEFKEGNKGQEAPMKKGVTLGQMVV 360


>gi|258541378|ref|YP_003186811.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256632456|dbj|BAH98431.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635513|dbj|BAI01482.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638568|dbj|BAI04530.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641622|dbj|BAI07577.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644677|dbj|BAI10625.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647732|dbj|BAI13673.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256650785|dbj|BAI16719.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256653776|dbj|BAI19703.1| D-alanyl-D-alanine serine-type carboxypeptidase [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 382

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 93/267 (34%), Positives = 146/267 (54%), Gaps = 2/267 (0%)

Query: 1   MRQFLVIIA-MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+++ ++A +A+ +      + A+        ++D  TG V++++ PD    PASLTKL
Sbjct: 23  LRKWVGLLAGLAVGTTATYGKAHAQYAGQLSSIVVDARTGAVLSQDDPDLRRYPASLTKL 82

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+ F+ L+     L   + +S +AS   PS      GS +T++ A+  L+ KSAND 
Sbjct: 83  MTLYMTFNALRAGAISLDQAVPVSIHASTMEPSKLGLVPGSHLTVEQAILALVTKSANDA 142

Query: 120 AVAIAESLCKTEK-KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           A A+ E +    + +F   M   +  LG+S T F NA G+      TTARD++ L  R+ 
Sbjct: 143 ACALGELIGGGSEPQFAAMMTQQAHYLGMSNTTFRNASGLPDPDQMTTARDLSTLGRRLI 202

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           +DFP+Y HYF         +  PN N  +  + GADGMKTG+T  +G N+V SAI+ +  
Sbjct: 203 SDFPEYYHYFSTPYFSFHRRIIPNHNPMLKVYAGADGMKTGYTQEAGRNLVTSAIRDNVR 262

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFY 265
           L+ V++GA     R+ V A+ L  GF 
Sbjct: 263 LVGVVMGASSNTQRSLVMANQLDRGFD 289


>gi|254474184|ref|ZP_05087575.1| penicillin-binding protein [Pseudovibrio sp. JE062]
 gi|211956714|gb|EEA91923.1| penicillin-binding protein [Pseudovibrio sp. JE062]
          Length = 485

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/253 (33%), Positives = 139/253 (54%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +A+   I    S+AE N      ++D  TG V+  N  +    PAS TK+MT YV+F  
Sbjct: 22  IIAVSVAIATAPSVAEANSKYAGIVVDAKTGKVLYANNANARRYPASTTKIMTLYVLFEE 81

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           L+  +  L T + +S+ A+  PP+    + G ++ + +A+  LI KSAND +  IAE + 
Sbjct: 82  LEAGRVSLNTKMKVSRYAAGRPPTKLGLRVGGSLRVKDAIYALITKSANDASTVIAEHIS 141

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +EK F + M  T++ +G+  T F N HG+      TTA D+A+L   I+  FP+Y  YF
Sbjct: 142 GSEKAFGRRMTQTARAIGMRNTTFRNPHGLPNSKQVTTAADLALLGRAIQDRFPKYYKYF 201

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             +     G++  N N  +G   G DG+KTG+T ASGFN+V +  + ++ ++AV+LG   
Sbjct: 202 NTRSYTYAGRRMGNHNKLLGRVRGVDGIKTGYTNASGFNLVTNVKRDNRQIVAVVLGGRT 261

Query: 249 RNTRNKVSASLLS 261
             +R+     L++
Sbjct: 262 GKSRDAQMVKLIN 274


>gi|311070657|ref|YP_003975580.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
 gi|310871174|gb|ADP34649.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
          Length = 441

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/372 (20%), Positives = 141/372 (37%), Gaps = 39/372 (10%)

Query: 1   MRQFLVIIAMAMLSNIFP---FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M  F V+  +             S           +++ ++G ++     D     AS+T
Sbjct: 10  MMSFFVLTLIVTCLAPMSRAKAASDPIDVNASAAIMIEASSGKILYSKNADKRLPIASMT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           K+MT Y++   + E K            + + + +   SN   +K    T+    +   +
Sbjct: 70  KMMTEYLLLEAIDEGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAI 129

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--------- 164
            SAN  A+A+AE +  +E KFV  MN  +K LGL+   F+NA G+     +         
Sbjct: 130 YSANAAAIALAEVMAGSETKFVDKMNAKAKELGLTNFKFVNATGLENKDLHGKQPEGTSV 189

Query: 165 -----TTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVG----TF 210
                 +A+DMAIL+ R+ TD+P+ +    I   + +         PN N+ +      +
Sbjct: 190 DEESEVSAKDMAILADRLITDYPEILDTASIAKTKFREGTDDEMDMPNWNFMLKGLVSEY 249

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFYNKT 268
            G DG+KTG T ++G    ++A +    +I V+L A       R   +  +L+  F N +
Sbjct: 250 KGVDGLKTGSTDSAGSCFTSTAERNGMRVITVVLNAKGNIHTGRFDETKKMLNYAFDNFS 309

Query: 269 DRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
            ++      +          +           +      K     N + K   DK+    
Sbjct: 310 MKEIYAEGKQVKGHKTISVEKGKDKEVGIVTKKAFSIPVKNGDEKNYKAKVTLDKDKLDA 369

Query: 322 DFEKITLLKNKI 333
             +K   +    
Sbjct: 370 PVKKGAKVGKLT 381


>gi|229131021|ref|ZP_04259937.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST196]
 gi|228652433|gb|EEL08354.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-ST196]
          Length = 418

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/355 (20%), Positives = 134/355 (37%), Gaps = 34/355 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN       A   +     L++ N+G ++ +   D   + AS+TK+M+ Y+V   + + K
Sbjct: 6   SNASAETGAALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVNEAIAKGK 65

Query: 74  AMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 + +S+ A       S          + T+    + + + SAN   +A+AE++  
Sbjct: 66  LKWDQKVKVSEYAYNISQDRSLSNVPLRNGESYTVKELYEAMAIYSANGATIALAEAVAG 125

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSW 175
            E  FV+ MN+ SK  GL    F+N+ G+                  +  +ARD+AIL+ 
Sbjct: 126 KEVDFVKMMNDKSKEFGLKNYKFVNSTGLTNKDLKGHHPEGTTPDEENKMSARDVAILAQ 185

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTCASGF 226
           R+  DFP+ +   +I     +         PN NW     +  + G DG+KTG T  +G 
Sbjct: 186 RLIQDFPKTLDIAKISKKVFREGTPDRIEMPNWNWMLKGLIKEYEGVDGLKTGSTPEAGD 245

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
               +  +     I+V++       R   +  L   GF +   +K          ++ + 
Sbjct: 246 CFTGTIERNGMRFISVVIKTKSHTARFDETKKLYDYGFASFEMKKMYEKGSSVKGRETVR 305

Query: 287 NEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            E            + V     +      + +  +  +      +K   L   + 
Sbjct: 306 VENAKDKDVAVQTKQAVSLPVPKGSKDVYKTEFKEGNKGQEAPMKKGVTLGQMVV 360


>gi|306841894|ref|ZP_07474574.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO2]
 gi|306288024|gb|EFM59426.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO2]
          Length = 472

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTASSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     E +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFEFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|304406838|ref|ZP_07388493.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
 gi|304344371|gb|EFM10210.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
          Length = 415

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/303 (25%), Positives = 118/303 (38%), Gaps = 10/303 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +A                     L+D  TG ++ E        PAS+TK++TA V     
Sbjct: 29  LASAGEQTALARKPPELLAESAILMDRRTGTILYEKNASQRMYPASITKIVTAIVALESA 88

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 +   +T+SK A     +    ++G  M L   L  ++V S ND A AIAE +  
Sbjct: 89  -----NVEDVVTVSKEARGEEGTRVYLEEGEQMKLWQLLLGMMVNSGNDAATAIAEHVDG 143

Query: 130 TEKKFVQHMNNTSKN-LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
           +++KF +HMN   +       + F N  G+    HYTTA DMA ++    ++        
Sbjct: 144 SKEKFAEHMNAWIREKANAYDSQFRNPSGLPDPEHYTTAEDMAKITQYAMSNEKFRELVG 203

Query: 189 QIKGLEIKGKKYP---NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             K +           N N  +GT+ GA G+K G+T  +G  +VASA +    LI VIL 
Sbjct: 204 TKKVIWNGQTWQTVLVNHNKLLGTYDGATGVKNGYTTLAGSTLVASAERNGMELIGVILK 263

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
           A   N       S+L  GF     +   +   + +             E + T   +   
Sbjct: 264 APSSNQMYADMRSILDYGFAAFEPKLLFDEN-ETYEMDGAPAVAYTADEAIWTVVPKGEK 322

Query: 306 YNT 308
              
Sbjct: 323 PKV 325


>gi|300947320|ref|ZP_07161521.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           116-1]
 gi|300453072|gb|EFK16692.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           116-1]
          Length = 347

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDALGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAVI+GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVIMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|153953878|ref|YP_001394643.1| DacA2 [Clostridium kluyveri DSM 555]
 gi|219854493|ref|YP_002471615.1| hypothetical protein CKR_1150 [Clostridium kluyveri NBRC 12016]
 gi|146346759|gb|EDK33295.1| DacA2 [Clostridium kluyveri DSM 555]
 gi|219568217|dbj|BAH06201.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 403

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 24/347 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET-------------NKLPYYTLLDTNTGHVIAENYPDHP 50
            ++ + + + S +    ++ E                     L++  +G +I E   +  
Sbjct: 15  LIMFLIIGLGSTVVKAKALTEEDKQEIKSIKADLSINAKSALLMEPTSGKIIFEKNANEK 74

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS+TK+M   +    L   K  L+  +T+S+NA +   S+     G   ++++ +K 
Sbjct: 75  LEPASVTKIMDMLLTMEALDSGKISLSDKVTVSENAKKMGGSSMLLDTGEVRSVEDLIKG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + + S ND AVA+AE L  TE+ FVQ MN  +K LG++ T F N  G+ Q GHYTTA D+
Sbjct: 135 IGIASGNDAAVAMAEYLGGTEEAFVQLMNKRAKELGMNNTQFKNCTGLSQEGHYTTAYDI 194

Query: 171 AILSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A++S  +            +   I        +  N N  V  F G DG+KTGFT ++ +
Sbjct: 195 ALMSSELLKHPNILKYTGTYMETISEGRKSPIELVNHNKLVRFFKGCDGLKTGFTDSAKY 254

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
            I A++++    ++AV++G+     RNK ++ L++ GF   T    +             
Sbjct: 255 CISATSVRDGARMLAVVMGSPTYKERNKEASMLMNYGFSKYTSINVLKKGDDIEKVNLNK 314

Query: 287 N------EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                     +   +V   + +      +    K+K  +    EK+ 
Sbjct: 315 GGDKFFMAKSSSDLKVTVEKGKENKITCRCVINKNKRQYK-KGEKVG 360


>gi|62290085|ref|YP_221878.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82700009|ref|YP_414583.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis biovar
           Abortus 2308]
 gi|148560388|ref|YP_001259090.1| D-alanyl-D-alanine carboxypeptidase [Brucella ovis ATCC 25840]
 gi|163843436|ref|YP_001627840.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
 gi|225627640|ref|ZP_03785677.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti str. Cudo]
 gi|237815590|ref|ZP_04594587.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|254697529|ref|ZP_05159357.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254701913|ref|ZP_05163741.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|254706648|ref|ZP_05168476.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|254710245|ref|ZP_05172056.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|254714241|ref|ZP_05176052.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|254717677|ref|ZP_05179488.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|256031739|ref|ZP_05445353.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|256061252|ref|ZP_05451403.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|256159905|ref|ZP_05457627.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
 gi|256255139|ref|ZP_05460675.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|260168872|ref|ZP_05755683.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. F5/99]
 gi|260546634|ref|ZP_05822373.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260761956|ref|ZP_05874299.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|261219519|ref|ZP_05933800.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261222337|ref|ZP_05936618.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|261314108|ref|ZP_05953305.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261317805|ref|ZP_05957002.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|261322014|ref|ZP_05961211.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|265988836|ref|ZP_06101393.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|294852510|ref|ZP_06793183.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NVSL 07-0026]
 gi|62196217|gb|AAX74517.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82616110|emb|CAJ11149.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella
           melitensis biovar Abortus 2308]
 gi|148371645|gb|ABQ61624.1| D-alanyl-D-alanine carboxypeptidase [Brucella ovis ATCC 25840]
 gi|163674159|gb|ABY38270.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
 gi|225617645|gb|EEH14690.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti str. Cudo]
 gi|237788888|gb|EEP63099.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|260095684|gb|EEW79561.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260672388|gb|EEX59209.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260920921|gb|EEX87574.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|260924608|gb|EEX91176.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261294704|gb|EEX98200.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|261297028|gb|EEY00525.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|261303134|gb|EEY06631.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|264661033|gb|EEZ31294.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|294821099|gb|EFG38098.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NVSL 07-0026]
          Length = 472

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|323139480|ref|ZP_08074528.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylocystis
           sp. ATCC 49242]
 gi|322395282|gb|EFX97835.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylocystis
           sp. ATCC 49242]
          Length = 530

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 109/324 (33%), Positives = 168/324 (51%), Gaps = 12/324 (3%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++      +A+ + + +    + A  +      ++D  +G V+ ++     W PASLTK
Sbjct: 4   MKRLRRFGALAIFLAAVVTAGRAGATPS-----LVIDVASGQVLEQDQATASWYPASLTK 58

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMTAYV    ++  +  + TP+ +S  A    PS   F+ GS +TL NAL +L+VKSAND
Sbjct: 59  LMTAYVALDAVRAGRISMDTPLMMSPRACRMAPSKMGFRAGSEVTLHNALIMLMVKSAND 118

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           IAVAIAE +  + + F   MN  S NLG++ + ++N +G+      T+ARD+AIL   + 
Sbjct: 119 IAVAIAEGVSGSVEAFADEMNRASANLGMTQSQWVNPNGLPDSRQVTSARDLAILGRALY 178

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             FP+Y + F I  ++I G+ +P  N  +G + GADGMKTGFTC +GFN+VASA  G Q 
Sbjct: 179 LQFPEYAYLFNIGAMQIGGRVHPTHNGLLGRYPGADGMKTGFTCPAGFNLVASATHGGQR 238

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           LIAV+LGA     R   +A+LL   F   +    +  +             P++ ++VC 
Sbjct: 239 LIAVVLGAPSAAARTAKAAALLDRAFQTGSPIGTLASLPSV-----GPTAAPDMRDKVCR 293

Query: 299 TQKEIINYNTQMKEAKDKESHFID 322
            +           E          
Sbjct: 294 NRGAATAEFMAEVEDMSIPVGSAP 317


>gi|254730424|ref|ZP_05189002.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260758130|ref|ZP_05870478.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260668448|gb|EEX55388.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
          Length = 472

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|254693878|ref|ZP_05155706.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|261214165|ref|ZP_05928446.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|260915772|gb|EEX82633.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
          Length = 472

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|225390069|ref|ZP_03759793.1| hypothetical protein CLOSTASPAR_03819 [Clostridium asparagiforme
           DSM 15981]
 gi|225043871|gb|EEG54117.1| hypothetical protein CLOSTASPAR_03819 [Clostridium asparagiforme
           DSM 15981]
          Length = 382

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 14/320 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
           P   L++ +TG VI E   D   +PAS+TK+MT  ++F  L+  K  +T  +  S  A  
Sbjct: 17  PSALLMEASTGQVIYEKDADQKRSPASITKIMTLILIFDALESGKIKMTDEVVTSAYAKS 76

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    ++G   T++  +K +I+ S ND +V +AE +  TE++FV+ MN  +  LG++
Sbjct: 77  MGGSQVFLEEGEKQTVETLIKCIIIASGNDASVTMAEYIGGTEQEFVRMMNERAAGLGMT 136

Query: 149 ATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-------- 199
            THF++  G+     H TTARD+AI+S  +   +PQ  +Y  I    I            
Sbjct: 137 NTHFVDCCGLTDSPDHVTTARDIAIMSRELINRYPQIHNYSTIWMENITHVTKQGTKEFG 196

Query: 200 YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
             NTN    + T     G+KTG T  + + + A+A +    LIAV++ A D   R   + 
Sbjct: 197 LSNTNKLLKMATNFTVTGLKTGSTSLAKYCLSATAEKDGVRLIAVVMAAPDFKARFADAQ 256

Query: 258 SLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           ++L+ G+ N     D++ +                               + +   K   
Sbjct: 257 TMLNYGYANCRLYEDKEMLPLPQMAVTGGVADQVPLYYEGSFSYLSLSGEDLDQVEKNLV 316

Query: 315 DKESHFIDFEKITLLKNKIT 334
            +ES      K         
Sbjct: 317 LEESLPAPVTKGQAAGVITY 336


>gi|254719233|ref|ZP_05181044.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|265984229|ref|ZP_06096964.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|306837982|ref|ZP_07470840.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. NF 2653]
 gi|264662821|gb|EEZ33082.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|306406906|gb|EFM63127.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. NF 2653]
          Length = 472

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +    PD    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVIDANTGKTLFSANPDAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKNTRIPVSAYAASRPPTKMGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     E +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFEFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|218235920|ref|YP_002367173.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus cereus B4264]
 gi|218163877|gb|ACK63869.1| D-alanyl-D-alanine carboxypeptidase DacA [Bacillus cereus B4264]
          Length = 437

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ E   D     
Sbjct: 7   KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYEKNADESLAI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 127 AMAIYSANGATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHPE 186

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ ++  +I     +          N NW     
Sbjct: 187 GTTLDEKNKMSARDCAILAQRLIQDFPKILNTAKIPKKIFQEGGKYPIDMANFNWMLKGL 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 247 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 306

Query: 267 KTDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +            +          + V    + V     +      + +     +  
Sbjct: 307 FEVKNFYGKDSVIKGYETVRVANAKDKDVVVQTKQAVSLPMSKGNKDIYKKEFKVLNKEQ 366

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 367 EAPIKKGVTISKMII 381


>gi|228952739|ref|ZP_04114812.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|228806910|gb|EEM53456.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar kurstaki str. T03a001]
          Length = 416

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETVPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLDEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            +K   +   I 
Sbjct: 301 HETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNTEQEAPIKKGVTISKMII 360


>gi|310639559|ref|YP_003944317.1| d-ala-d-ala carboxypeptidase [Paenibacillus polymyxa SC2]
 gi|309244509|gb|ADO54076.1| D-ala-D-ala carboxypeptidase [Paenibacillus polymyxa SC2]
          Length = 462

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 148/349 (42%), Gaps = 37/349 (10%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
              +  L    L++ +TG V+    PD P  PAS+TK+MT Y+V   +K+ K   T  +T
Sbjct: 64  NPPSLALRSAILIEPSTGQVLLSMNPDEPLPPASMTKMMTEYIVAEQVKQGKLKWTDKVT 123

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++NAS+   S     +G   T++     + V SAND  VA+AE +  TE+ FV+ MN T
Sbjct: 124 VNENASKSIGSRIFLAQGDQHTVEELYIAMAVGSANDATVALAERVSGTEQDFVKLMNET 183

Query: 142 SKNLGLSATHFMNAHGVV------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++ +G+  T+F+N+ G+                   TARD A L+  I  D P Y  +  
Sbjct: 184 AQRMGMKNTYFINSTGLDRKDMPTGFQPDTDRETVMTARDAATLAGYIIKDHPDYTRFTT 243

Query: 190 IKGLEIKGK---KYPNTNWA-----------VGTFLGADGMKTGFTCASGFNIVASAIQG 235
           I+  + +        N NW               + G DGMKTG T  +G     +A + 
Sbjct: 244 IQSYKFRPTDKAPIINYNWMLEANKNITNFRKFAYPGLDGMKTGHTANAGNCFTGTAERN 303

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
              LI+V++GA     R   +A +L+ GF N   ++ +         +N+         E
Sbjct: 304 GMRLISVVMGADSDAHRFTETAKVLNYGFDNFEVKQVVAPKTVVKGVENVP-VTKGTETE 362

Query: 296 VCTTQKEIINYNTQMKEAKDKE----------SHFIDFEKITLLKNKIT 334
           V    K+ +++      +  K           S     ++   +     
Sbjct: 363 VPIVTKDAVSFIVPKGASNPKVTFTTNITPASSLVAPLKQGAKVGTITY 411


>gi|17987097|ref|NP_539731.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase
           fraction C) [Brucella melitensis bv. 1 str. 16M]
 gi|225852669|ref|YP_002732902.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis ATCC
           23457]
 gi|256044826|ref|ZP_05447730.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113731|ref|ZP_05454535.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|256263838|ref|ZP_05466370.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|265991251|ref|ZP_06103808.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265995087|ref|ZP_06107644.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|17982757|gb|AAL51995.1| penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidase
           fraction c) [Brucella melitensis bv. 1 str. 16M]
 gi|225641034|gb|ACO00948.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis ATCC
           23457]
 gi|262766200|gb|EEZ11989.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|263002035|gb|EEZ14610.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263093969|gb|EEZ17903.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409190|gb|ADZ66255.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis M28]
          Length = 472

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKTKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|190890661|ref|YP_001977203.1| D-alanyl-D-alanine carboxypeptidase [Rhizobium etli CIAT 652]
 gi|190695940|gb|ACE90025.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CIAT
           652]
          Length = 432

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 97/307 (31%), Positives = 153/307 (49%), Gaps = 8/307 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR+ L  +    L+   P  ++A         +LD  TG V+A    D   +PASLTK+M
Sbjct: 1   MRKLLAAVLTVTLAVSAPLAALA----GSASLILDARTGKVLAAENADTLNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  LK  K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A
Sbjct: 57  TLYLTFEALKRGKIDWDTPIRMSKYAAARPPTKLGVKAGGTITVREAVYGMIVKSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE+L  +E  F + M   ++ LG+S T F+NA G+      TTARDM+ L   +  +
Sbjct: 117 AAMAETLGGSESGFARMMTAKARQLGMSRTVFVNASGLPNPSQVTTARDMSTLGVALMKN 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P     F +     +GK     N  +  + G DG+KTG+T ASGFN+V++   G++ ++
Sbjct: 177 YPNEYRLFSMASFNFRGKTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVV 236

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTD----RKKINYIIKDFYQQNLSNEVPNISEEV 296
            V+LG     +R+   A LL       +     R   +   K+  +   + +  ++   +
Sbjct: 237 GVVLGGRTARSRDAKMAGLLDRYLGRASSSGGARLVASVGAKEPVEVASAADASDVPVPL 296

Query: 297 CTTQKEI 303
              +   
Sbjct: 297 NAPRPAG 303


>gi|320175602|gb|EFW50695.1| D-alanyl-D-alanine carboxypeptidase [Shigella dysenteriae CDC
           74-1112]
          Length = 347

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRTIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|325265744|ref|ZP_08132433.1| D-alanyl-D-alanine carboxypeptidase DacA [Kingella denitrificans
           ATCC 33394]
 gi|324982875|gb|EGC18498.1| D-alanyl-D-alanine carboxypeptidase DacA [Kingella denitrificans
           ATCC 33394]
          Length = 489

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 5/319 (1%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  A   +   Y + D  +  V+AE     P  PASLT LM AY+ F  L  +   
Sbjct: 131 SLSATQSAPHIQAAAYAVYDAQSRQVLAEKNFALPIEPASLTHLMVAYLAFKALDAQTIT 190

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                T+S+NA +   +    ++G      + L  +++ S ND A+ +AE +  +E  FV
Sbjct: 191 PKQEWTVSENAWKSAGNRMFLERGGKANTIDLLHGMLILSGNDAALTLAEGMAGSESAFV 250

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++ LG+  THF N  G+    H ++ +D+ ILS  +  DFP Y   F  K    
Sbjct: 251 AQMNAEAERLGMRQTHFENVTGLHSPKHVSSVQDLLILSQALLRDFPDYYQIFAKKTFTY 310

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                PN N  +      DG+K G++  +G++++  + +  + + ++++GA     R   
Sbjct: 311 NKITQPNHNLLLFRNDDVDGLKAGYSDIAGYHLITGSHRNGRRIFSIVIGASSNEARAIE 370

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE----VPNISEEVCTTQKEIINYNTQMK 311
           S  LL+        +K      K      L           +++V  T         ++K
Sbjct: 371 SRKLLNYALEAFDTQKIYAANTKITELPVLDGSHTRIEAGTAQDVYLTFPRHSPQPPEIK 430

Query: 312 EAKDKESHFIDFEKITLLK 330
            +    +H    +K   L 
Sbjct: 431 ISVPNVAH-APVQKGQTLG 448


>gi|209964991|ref|YP_002297906.1| D-alanyl-D-alanine carboxypeptidase [Rhodospirillum centenum SW]
 gi|209958457|gb|ACI99093.1| D-alanyl-D-alanine carboxypeptidase [Rhodospirillum centenum SW]
          Length = 458

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 84/236 (35%), Positives = 125/236 (52%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  TG ++     D    PAS+TK+MT Y+ F  L  +K  L   + +S  A+  
Sbjct: 62  ASIVIDAETGEILHAASADTRNFPASMTKMMTLYMTFDALDARKLTLDQRLKVSSRAAGM 121

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            PS    K G T+  ++ +  L+ KSAND AV +AE++  TE +F + M + ++ LG+  
Sbjct: 122 APSKLGLKPGETIRTEDCILSLVTKSANDCAVVLAEAIGGTETEFARMMTDRARALGMRR 181

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F NA G+   G  +TARDMA L+  +  D  +Y  YF  +    KG  + N N  +  
Sbjct: 182 TTFRNASGLPNAGQLSTARDMARLAQALIQDHAKYYPYFSTRQFTYKGVTHGNHNRLMAR 241

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           + G DG+KTGF  ASGFN+ ASA++  + LI V+ G      R+   A LL   F 
Sbjct: 242 YRGMDGLKTGFIRASGFNLAASAVRDGRRLIGVVFGGETAVWRDNHMADLLDKAFE 297


>gi|154248244|ref|YP_001419202.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xanthobacter
           autotrophicus Py2]
 gi|154162329|gb|ABS69545.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xanthobacter
           autotrophicus Py2]
          Length = 399

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 86/317 (27%), Positives = 131/317 (41%), Gaps = 8/317 (2%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              + P   L+D  TG ++ E   D    P +L K+MTA VVFS LK  K  L TP T+S
Sbjct: 29  FQTQAPSAILVDYETGTILFEKDADRRIAPGTLAKVMTADVVFSQLKAGKIALDTPFTVS 88

Query: 84  KNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            NA               +      +   L  ++V S ND A+A+AE +  TE +F Q M
Sbjct: 89  VNAWRRGGGPSGGAAMFAEVNKPAPVGELLAGMLVVSGNDAAIALAEGVGGTETEFSQQM 148

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
              +K +G++ + F NA G    G ++TARD+++L+  +   +P Y   F    +E    
Sbjct: 149 TERAKAIGMANSEFRNATGFADPGQFSTARDLSVLAQHVIRTYPDYYPVFARTSIEWSRI 208

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           K  N N  +   +GADG++ G+    G++ + SA+Q  Q LI V+L A     R + +  
Sbjct: 209 KQRNRNVLLDAGIGADGLQIGWVKDVGYHALGSAVQNGQRLIVVVLAAKTEKERLEEAKK 268

Query: 259 LLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           LL  GF +   R       +          S  V  +     T                 
Sbjct: 269 LLEWGFQSFRQRVIFTADQEVGRAQVFGGASGTVGLVGSRPVTVLTPRSGNERITARVVY 328

Query: 316 KESHFIDFEKITLLKNK 332
                    K T +   
Sbjct: 329 NGPLLAPVTKGTQVGRL 345


>gi|162149241|ref|YP_001603702.1| D-alanyl-D-alanin carboxypeptidase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787818|emb|CAP57416.1| putative D-alanyl-D-alanin carboxypeptidase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 423

 Score =  177 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 145/264 (54%), Gaps = 1/264 (0%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F + +  A +   F   + A+        ++D  TG +++++ PD    PASLTKLMT Y
Sbjct: 80  FALSVGCAAVMAGFVPRAHAQYVGQISSIVMDARTGAILSQSNPDLQRFPASLTKLMTLY 139

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  L   +  L   + +S +++   PS      GS +T++ A+  L+ KSAND A A+
Sbjct: 140 LAFKALHAGQITLDQSVPVSAHSASMEPSKLGLMPGSYLTVEQAVLGLVTKSANDAACAL 199

Query: 124 AESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
            E +   ++  F   M   ++ LG++ T F NA G+      T+ARD+A+L+ +I T+FP
Sbjct: 200 GELMGGGDEGRFADLMTRQARALGMTRTTFRNASGLPNDEQVTSARDLALLTRQIITEFP 259

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
            Y HYF +      G++ PN +  +  + GADG+KTG+T  +G N+V SAI+ +  LI V
Sbjct: 260 DYYHYFSVPAFYFHGRQVPNHDPMLRIYPGADGLKTGYTTDAGRNLVTSAIRENVRLIGV 319

Query: 243 ILGALDRNTRNKVSASLLSMGFYN 266
           +LGA     R+ V AS+L  GF  
Sbjct: 320 VLGARTNPQRSAVMASILDDGFRQ 343


>gi|228943200|ref|ZP_04105668.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228975976|ref|ZP_04136496.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228979109|ref|ZP_04139457.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis Bt407]
 gi|228780635|gb|EEM28854.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis Bt407]
 gi|228783733|gb|EEM31792.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228816479|gb|EEM62636.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar berliner ATCC 10792]
          Length = 442

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 137/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 12  KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYKKNADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+  +        
Sbjct: 132 AMAIYSANGATIALVEEIASKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNNDLKGYHPE 191

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 192 GTTLDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQEGGKYPIDMANFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                      ++ V    + V     +      + +     +  
Sbjct: 312 FEVKNVYRKDSVVKGHETVRVANAKDTDVVVQTKQAVSLPMPKGNKDIYKKEFKVLNKKQ 371

Query: 320 FIDFEKITLLKNKIT 334
            +  +K   +   I 
Sbjct: 372 EVPIKKGVTISKMII 386


>gi|296447596|ref|ZP_06889517.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylosinus
           trichosporium OB3b]
 gi|296254911|gb|EFH02017.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylosinus
           trichosporium OB3b]
          Length = 448

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 99/301 (32%), Positives = 159/301 (52%), Gaps = 2/301 (0%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  +G ++ +  P   W PASLTKLMT YV    ++  +    TP+ +S  A+   P
Sbjct: 28  VVIDVASGQILEQEQPTQSWYPASLTKLMTVYVALDAVRSGRLSYDTPLVVSPRATSMAP 87

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   F  GS +TL NAL +L+VKSAND+AV IAE +  + + F   MN  S  LG+  ++
Sbjct: 88  SKMGFPPGSEVTLRNALVMLMVKSANDVAVTIAEGVSGSVEAFADEMNRASARLGMRESY 147

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           ++N +G+      T+ARD+A+L   +  +FP+   ++ I  ++   + +P  N  +G + 
Sbjct: 148 WVNPNGLPDDRQVTSARDLALLGRALLVEFPESAGFYNIGAMKFGSQIHPTHNGLLGRYP 207

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           GADGMKTGFTC +G+N+VASA  G Q LIAV+LGA     R   +ASLL   F + +   
Sbjct: 208 GADGMKTGFTCPAGYNLVASATHGGQKLIAVVLGAPSGAARTAKAASLLDKAFTSGSPAG 267

Query: 272 KINYIIKDFY--QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +  +         ++ + V +   +        +   T     ++ E+  +D + I  L
Sbjct: 268 ALAALPSSGVAPAPDMRDSVCHHRGKASAEYMAEVEEMTIAIPHENGETEAVDVKAIAQL 327

Query: 330 K 330
            
Sbjct: 328 P 328


>gi|315500037|ref|YP_004088840.1| serine-type d-ala-d-ala carboxypeptidase [Asticcacaulis excentricus
           CB 48]
 gi|315418049|gb|ADU14689.1| Serine-type D-Ala-D-Ala carboxypeptidase [Asticcacaulis excentricus
           CB 48]
          Length = 464

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 90/268 (33%), Positives = 150/268 (55%), Gaps = 1/268 (0%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + +L+           +      ++D  +G V      D P  PASLTK+MT Y+ F  +
Sbjct: 38  IGVLAVSPARAQDPADSDRYAAIVVDAQSGEVFYAMRADSPRYPASLTKIMTLYMAFEEM 97

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
            + +      IT+S +A+  PP+ S  + G T+T+D A++L+   SAND+A A+ E +  
Sbjct: 98  AQGRLKPDDVITLSAHAASMPPTKSGLRAGDTITVDMAMRLIAAYSANDLAAALGEHIGG 157

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E++F   M   ++ LG++ ++F+NA G+      ++ARD A+L+  +  DFPQY  YF 
Sbjct: 158 SEQRFAALMTVKAQELGMTRSNFVNASGLPDSRQVSSARDFAVLARAVMRDFPQYYEYFH 217

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           ++ ++  G+ Y N N  +  + G DGMKTGF  A+G+N+VAS  +G+  LIAV+LG  ++
Sbjct: 218 VRSVQFNGRTYSNHNPLLA-YPGVDGMKTGFINAAGYNLVASQRKGNHRLIAVMLGGSNK 276

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYII 277
             R +   SL++ GF     R K   I+
Sbjct: 277 AQRREHVTSLMNTGFDVFARRDKGEQIV 304


>gi|296503035|ref|YP_003664735.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|296324087|gb|ADH07015.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 434

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 132/367 (35%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAMLSN---IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ I  +M+            A   +     L++ N+G ++ E   D     AS+TK+M+
Sbjct: 12  VLTIFCSMVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMS 71

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSAN 117
            Y+V   + + K      + IS+ A +     S          + T+    + + + SAN
Sbjct: 72  EYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSAN 131

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------H 163
              +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+                  +
Sbjct: 132 GATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLEEKN 191

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +ARD AIL+ R+  DFPQ ++  +I     +          N NW     +  + G D
Sbjct: 192 KMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVD 251

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N   +    
Sbjct: 252 GLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYG 311

Query: 275 YIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                              + V    + V     +      + +            ++  
Sbjct: 312 KDSVIKGHETVRVANAKEKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNMEQGAPIKEGG 371

Query: 328 LLKNKIT 334
            +   I 
Sbjct: 372 TISKMII 378


>gi|254689394|ref|ZP_05152648.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|256257640|ref|ZP_05463176.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|260883925|ref|ZP_05895539.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|297248482|ref|ZP_06932200.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 5 str.
           B3196]
 gi|260873453|gb|EEX80522.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|297175651|gb|EFH34998.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 5 str.
           B3196]
          Length = 472

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEDPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|146277284|ref|YP_001167443.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145555525|gb|ABP70138.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 389

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 135/330 (40%), Gaps = 13/330 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               ++A   +     + D  T  V+ +     P  PAS++KLMT  ++F  L++ +  +
Sbjct: 16  TALPALAFDTRARAAWVYDVTTRTVLLDKNAHEPLPPASMSKLMTLNMLFEALRDGRVTM 75

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T   +S  A +   S    ++    T+++ +  ++V S ND  V +AE L  TE  F +
Sbjct: 76  NTTFAVSTKAKQMGGSKMFVEERDRPTVEDLIHGIVVNSGNDACVVVAEGLNGTESDFSR 135

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  +K LG++ + F N+ G  + GH  +  D+ IL+ R+  +FP+Y  YF       K
Sbjct: 136 AMNVRAKALGMNDSTFTNSSGWPEPGHRMSVHDLGILAVRLIEEFPEYYPYFAHTEFNYK 195

Query: 197 GKKYPNTNWA-------VGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALD 248
            +   N N               ADG+KTG T  +G+ +V SA  +  + ++ V+ G   
Sbjct: 196 DRVPSNANNRNPLLRLGPDGDWTADGLKTGHTQEAGYGLVGSAVQKDGRRIVFVLTGLAT 255

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEII 304
              R +    +++  F     +  +    +    D +  N S      +E+V      ++
Sbjct: 256 EADRAQEGEQIVNWAFRQFVQKTLVKKGQRVAEADVWLGNASRVGLVPAEDVTLLLPALV 315

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                  E                L   + 
Sbjct: 316 Q-EGVTAEVSYTSPLRAPIAAGQELAELVI 344


>gi|219668772|ref|YP_002459207.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
 gi|219539032|gb|ACL20771.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
          Length = 423

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 133/344 (38%), Gaps = 18/344 (5%)

Query: 1   MRQFLVIIAMAMLSNIF---------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ + +I + +   IF            +           L+D  +G  +     D   
Sbjct: 1   MKRIIALITLLLYFFIFVPALTAAPETQTAAPPEISGEAAYLIDVQSGQTLYSKNGDQLM 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS TK+MT  +       +  +  +   +  + +    +    + G  ++L++ L  L
Sbjct: 61  APASTTKIMTGLLGIELGNPEDIVTASETML--DYNTVYGTRIYLEPGEQLSLEDMLYAL 118

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAND AVAIAE +      FV  MN  + +LGL  T F N  G+ + GH  TA D+A
Sbjct: 119 LLNSANDAAVAIAEHISGNTAAFVSLMNQRAADLGLKNTTFKNPSGLNEEGHLITAHDLA 178

Query: 172 ILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            ++          D+ +   +   +  E    +  N N  +       GMKTG+T  +  
Sbjct: 179 RIAQAAYANPVFRDYIKTKSHVIPRAKENVPIEMINENKLLWRDDTITGMKTGYTSVAQN 238

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
            +VASA +  + +I VIL +  R        +LL  GF    +             +   
Sbjct: 239 CLVASASRDGRDVIGVILKSPGREI-YTDMQALLDYGFEQFENTLYKGVGDSLGQLEIQG 297

Query: 287 NEVPNISEE-VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             V  + ++ +  TQK+              +    +  +  +L
Sbjct: 298 QPVNLLIDQALWITQKKDNTLPQPRINILPIDGELAEVAEGQVL 341


>gi|256369597|ref|YP_003107107.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|255999759|gb|ACU48158.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
          Length = 472

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKH 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|329114967|ref|ZP_08243722.1| D-alanyl-D-alanine carboxypeptidase DacF [Acetobacter pomorum
           DM001]
 gi|326695410|gb|EGE47096.1| D-alanyl-D-alanine carboxypeptidase DacF [Acetobacter pomorum
           DM001]
          Length = 382

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 93/267 (34%), Positives = 145/267 (54%), Gaps = 2/267 (0%)

Query: 1   MRQFLVIIA-MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+++ ++A +A+ +      + A+        ++D  TG V++++ PD    PASLTKL
Sbjct: 23  LRKWVGLLAGLAVGTTATYGKAHAQYAGQLSSIVVDARTGAVLSQDDPDLRRYPASLTKL 82

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+ F+ L+     L   + +S +AS   PS      GS +T++ A+  L+ KSAND 
Sbjct: 83  MTLYMTFNALRAGAISLDQAVPVSIHASTMEPSKLGLVPGSHLTVEQAILALVTKSANDA 142

Query: 120 AVAIAESLCKTEK-KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           A A+ E +    + +F   M   +  LG+S T F NA G+      TTARD++ L  R+ 
Sbjct: 143 ACALGELIGGGSEPQFAAMMTQQAHYLGMSNTTFRNASGLPDPDQMTTARDLSTLGRRLI 202

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFP+Y HYF         +  PN N  +  + GADGMKTG+T  +G N+V SAI+ +  
Sbjct: 203 ADFPEYYHYFSTPYFSFHRRIIPNHNPMLKVYAGADGMKTGYTQEAGRNLVTSAIRDNVR 262

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFY 265
           L+ V++GA     R+ V A+ L  GF 
Sbjct: 263 LVGVVMGASSNTQRSLVMANQLDRGFD 289


>gi|154253237|ref|YP_001414061.1| Serine-type D-Ala-D-Ala carboxypeptidase [Parvibaculum
           lavamentivorans DS-1]
 gi|154157187|gb|ABS64404.1| Serine-type D-Ala-D-Ala carboxypeptidase [Parvibaculum
           lavamentivorans DS-1]
          Length = 558

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 133/259 (51%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
             +I + +L  +     +          ++D  +G V+     D    PASLTK+MT Y+
Sbjct: 23  FCLICLFLLFGLLVAAPVQAAAPKEAALVIDAYSGKVLYARSADEYRYPASLTKVMTLYL 82

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  L+  +  L + IT++   +  PPS    + G T+++++A+  L+ +SAND+A A  
Sbjct: 83  LFEKLQAGEVTLKSRITMTPRGAGMPPSKLGLRAGQTLSVEDAILALVTRSANDVASATG 142

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
             +  TE  F   M   ++ LG++ T + NA G+      TTARD A L+ RI+ DFPQY
Sbjct: 143 AFIAGTEDDFAALMTKKARALGMTRTTYKNASGLPNSAQKTTARDQATLAKRIREDFPQY 202

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            HYF  +       +  N N  +G + G  G+KTG+T ASGFN+ A+  + ++ LI V++
Sbjct: 203 YHYFSTEYFAWGKARIRNHNRLLGEYKGTTGLKTGYTNASGFNLTATVERDNKFLIGVVM 262

Query: 245 GALDRNTRNKVSASLLSMG 263
           G      R+     +L   
Sbjct: 263 GGKQAKLRDAHMIEILDRA 281


>gi|308066921|ref|YP_003868526.1| D-alanyl-D-alanine carboxypeptidase precursor [Paenibacillus
           polymyxa E681]
 gi|305856200|gb|ADM67988.1| D-alanyl-D-alanine carboxypeptidase precursor [Paenibacillus
           polymyxa E681]
          Length = 462

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 147/349 (42%), Gaps = 37/349 (10%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                 L    L++ +TG V+    PD P  PAS+TK+MT Y+V   +K+ K   T  +T
Sbjct: 64  NPPNLALRSAILIEPSTGQVLLSMNPDEPLPPASMTKMMTEYIVAEQVKQGKLKWTDKVT 123

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++NAS+   S     +G   T++     + V SAND  VA+AE +  TE+ FV+ MN T
Sbjct: 124 VNENASKSIGSRIFLAQGDQHTVEELYIAMAVGSANDATVALAERVSGTEQDFVKLMNET 183

Query: 142 SKNLGLSATHFMNAHGVV------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++ +G+  T+F+N+ G+                   TARD A L+  I  D P Y  +  
Sbjct: 184 AQRMGMKNTYFINSTGLDRSDMPKGFQPDTDRETVMTARDAATLASYIIKDHPDYTRFTT 243

Query: 190 IKGLEIKGK--------------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           I+  + +                    TN+    + G DGMKTG T  +G     +A + 
Sbjct: 244 IQSYKFRPTDKAPLININWMLEANKNITNFRKFAYPGLDGMKTGHTANAGNCFTGTAERN 303

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
              LI+V++GA     R   +A +L+ GF N   ++ I         +N+         E
Sbjct: 304 GMRLISVVMGADSDAHRFTETAKVLNYGFDNFEVKQVIAPKTVVKGVENVP-VTKGTETE 362

Query: 296 VCTTQKEIINYNTQMKEAKDKE----------SHFIDFEKITLLKNKIT 334
           V    K+ +++      +  K           S     ++   +     
Sbjct: 363 VPIVTKDAVSFIVPKGASNPKVTFTTNITPASSLVAPLKQGAKVGTITY 411


>gi|326940194|gb|AEA16090.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 437

 Score =  177 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 137/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ +   D     
Sbjct: 7   KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYKKNADESLAI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 67  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+  +        
Sbjct: 127 AMAIYSANGATIALVEEIASKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNNDLKGYHPE 186

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     
Sbjct: 187 GTTLDEKNKMSARDCAILAQRLIQDFPKILDTAKIPKKTFQEGGKYPIDMANFNWMLKGL 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 247 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 306

Query: 267 KTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +                      ++ V    + V     +      + +     +  
Sbjct: 307 FEVKNVYRKDSVVKGHETVRVANAKDTDVVVQTKQAVSLPMPKGNKDIYKKEFKVLNKKQ 366

Query: 320 FIDFEKITLLKNKIT 334
            +  +K   +   I 
Sbjct: 367 EVPIKKGVTISKMII 381


>gi|15895333|ref|NP_348682.1| D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025050|gb|AAK80022.1|AE007709_6 D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum
           ATCC 824]
 gi|325509478|gb|ADZ21114.1| D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum EA
           2018]
          Length = 404

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P  +     +     LL+ +TG +I E      + PAS+TK+MT  +    +   K  LT
Sbjct: 41  PNDTSGINVEAKSAILLEPSTGAIIYEKNSHEKFAPASVTKIMTMLLTMEAVDSGKIKLT 100

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +T+S+NA +   S+     G   T++  LK + + S ND AVA+AE L  +++ FV  
Sbjct: 101 DKVTVSENAKKMGGSSMLLDTGEVRTVEELLKGIAIASGNDAAVAMAEYLGGSQENFVNM 160

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGL 193
           MN  ++ +G+  T F N  G+   GH TTA D++++S  +            +   I   
Sbjct: 161 MNKKAQEIGMKDTSFKNCTGLNADGHMTTAYDISLMSRELLKHPKILKFTGTYMETISEG 220

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N N  V  F G DG+KTGFT  + + I A+A + +  ++A+I+GA     RN
Sbjct: 221 RKTPIALVNHNKLVRFFKGCDGLKTGFTDEAKYCISATACKDNVRMLAIIMGAPTYKVRN 280

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFY----QQNLSNEVPNISEEVCTTQKEIINYNT 308
           + ++ L++ GF   T +K +            ++     +    +++     +  N N 
Sbjct: 281 RDASMLMNYGFSKFTAKKVVEKDSVVKKVALNKKGDKYFLIKAVDDLSVVIPKGENCNI 339


>gi|239832060|ref|ZP_04680389.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
 gi|239824327|gb|EEQ95895.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
          Length = 469

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 85/298 (28%), Positives = 144/298 (48%), Gaps = 9/298 (3%)

Query: 8   IAMAMLSNIFPFLSIAETNKL---PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + +A+++      +              ++D NTG  +  +  D    PASLTK+MT Y+
Sbjct: 20  LLLAVVTGCSTASTTIPAIAAGDRYAAIVIDANTGKTLFASNADAQRYPASLTKMMTLYM 79

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  ++  +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+ 
Sbjct: 80  LFEAMQAGRMSKDTRIPVSAYAAARPPTKIGFRPGQSIRAEDAALAMITKSANDVATAVG 139

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +E++F Q M   ++ LG+  T F NA G+     +TTARDMAILS  ++  FP  
Sbjct: 140 EYLGGSEERFAQMMTAKARRLGMRNTTFRNASGLPNMAQHTTARDMAILSIALRQHFPNE 199

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +    +G+     N  +G   G DG+KTG+T ASG+N+ +S     + L+AV++
Sbjct: 200 FSYFSRRSFVFRGQTINGHNRLLGRVEGVDGIKTGYTNASGYNLASSVSLDGRRLVAVVM 259

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           G     +R+   A L+             +          + N+ P +   V   + +
Sbjct: 260 GGNTGASRDAHMAQLI----RKYLPMATRSRNAAPLV--AMRNDAPQVVASVDLPKAK 311


>gi|229065500|ref|ZP_04200748.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH603]
 gi|228715818|gb|EEL67590.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH603]
          Length = 416

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 71/353 (20%), Positives = 129/353 (36%), Gaps = 34/353 (9%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  A   +     L++ N+G ++ +   D     AS+TK+M+ Y+V   + + K  
Sbjct: 8   ASAETVPAIDVEAGSAILVEANSGKILYQKNADESLAIASMTKMMSEYLVHEAVDKGKLK 67

Query: 76  LTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               + IS+ A +     S          + T+    + +++ SAN   +A+AE +   E
Sbjct: 68  WDQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYEAMVIYSANGATIALAEEIAGKE 127

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRI 177
             FV+ MN+ SK  G+    F+N+ G+                  +  +ARD AIL+ R+
Sbjct: 128 VNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPEGTTPDEKNKMSARDCAILAQRL 187

Query: 178 KTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFTCASGFNI 228
             DFP+ +   +I     +          N NW     +  + G DG+KTG T  +G   
Sbjct: 188 IQDFPKILDTAKIPKKTFQKGGKYPIDMTNFNWMLKGLIKQYEGVDGLKTGTTPEAGDCF 247

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY------- 281
             +  +    LI+V++ A     R   +  L   GF N   +K                 
Sbjct: 248 TGTVEKNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKKVYGKDSVVKGHETVRVA 307

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                + V    + V     +      + +     +      +K   +   I 
Sbjct: 308 NAKDKDVVVQTKQAVSLPMPKGNKDVYKKEFKVSNKEQEAPIKKGVTISQMII 360


>gi|298293245|ref|YP_003695184.1| serine-type D-Ala-D-Ala carboxypeptidase [Starkeya novella DSM 506]
 gi|296929756|gb|ADH90565.1| Serine-type D-Ala-D-Ala carboxypeptidase [Starkeya novella DSM 506]
          Length = 461

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 101/310 (32%), Positives = 168/310 (54%), Gaps = 4/310 (1%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                +++  +G V+  +    PW PAS+TKLMTAYV F  +++ +    T +T+S NA 
Sbjct: 33  ATPALVIEVESGKVLLADDATKPWYPASITKLMTAYVTFKAIRQGRLTPETLLTVSANAV 92

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
              PS   FK G+ +T+DNALK+++VKSAND+AV +AE +  +   FV  MN+T+  LG+
Sbjct: 93  AQKPSKMGFKAGTQLTVDNALKMMLVKSANDMAVVLAEGVSGSLPAFVAEMNSTAAQLGM 152

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
           + +HF N +G+    + +TARD+A+L+  I  DFP+    F+I  +++      + N  +
Sbjct: 153 TGSHFANPNGLPDPDNVSTARDLAVLARHIFLDFPEQADLFRIPAMKLGTAVIRSYNKLI 212

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
             + GADGMKTGF CASGFN+VASA +G++ L+ V+LG      R + +A LL  GF + 
Sbjct: 213 DRYPGADGMKTGFICASGFNLVASAKRGNRHLLVVVLGTQSGRARTEQAALLLERGFQH- 271

Query: 268 TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           + +            +N      ++  +VC  +++               +    +    
Sbjct: 272 SWQIFGAMAPTVEALRNEGGAPADMRAQVCGGKRKNTASEDDDS-PSMGTTTAAGYVAAG 330

Query: 328 L--LKNKITK 335
           +  L +++T 
Sbjct: 331 MGDLGDRVTG 340


>gi|229190458|ref|ZP_04317457.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus ATCC 10876]
 gi|228593007|gb|EEK50827.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus ATCC 10876]
          Length = 416

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 129/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLDEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVVKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V  + + V     +      + +            +K   +   I 
Sbjct: 301 HETVRVANAKEKDVVVQMKQVVSLPMPKGNKDIYKKEFKVSNTEQEAPIKKGVTISKMII 360


>gi|161619123|ref|YP_001593010.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|254704458|ref|ZP_05166286.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|261755137|ref|ZP_05998846.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|161335934|gb|ABX62239.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|261744890|gb|EEY32816.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
          Length = 472

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|23502050|ref|NP_698177.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|23348005|gb|AAN30092.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
          Length = 472

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRNTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     + +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFDFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|306844035|ref|ZP_07476630.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO1]
 gi|306275790|gb|EFM57514.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO1]
          Length = 472

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+       +      ++A+ +      ++D NTG  +     D    PASLTK+MT Y
Sbjct: 20  LLLTAVTGYSTVSSIAPAMAKGDNRYAAIVVDANTGKTLFSANADAQRYPASLTKMMTLY 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++F  +   +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+
Sbjct: 80  MLFEAIHAGRINKDTRIPVSAYAASRPPTKIGFRPGQSIRAEDAALAMITKSANDVAAAV 139

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L  +E++F Q M   ++ LG+  T F NA G+     +++ARDMAIL   ++  FP+
Sbjct: 140 GEYLGGSEERFAQMMTARARRLGMRKTTFRNASGLPNMAQHSSARDMAILGMALRRHFPR 199

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              YF     E +G+     N  +G   G DG+KTG+T ASG+N+V+S     + L+AV+
Sbjct: 200 EFAYFSRSSFEFRGQTIRGHNRLLGRVEGVDGIKTGYTNASGYNLVSSVNLDGRRLVAVV 259

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   A L+                  +       +E P +   +   + + 
Sbjct: 260 MGGNTGASRDAHMAQLIR------KYLPMAARGRNNDALIAARSEAPQVVASIDLPKAKR 313

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
                     +D  +  I    I  
Sbjct: 314 APVPVARIAVEDIINAEIGEGDIDQ 338


>gi|315643932|ref|ZP_07897102.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           vortex V453]
 gi|315280307|gb|EFU43596.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           vortex V453]
          Length = 336

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 19/278 (6%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + +++     + I  + K     L+   TG V+   + D P  PAS++K+MT  +V  
Sbjct: 46  FVVILMAVYITRVIIPPSIKASSAILIHAETGRVLYAQHADLPLPPASMSKMMTELLVLD 105

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            ++  +      ++IS+ A+  P S     +G + TL    + LI+ SAND AVAIAE L
Sbjct: 106 AVRSGQHAWDEEVSISRYAAGVPGSGIGMVEGESYTLTQLFQALIIHSANDAAVAIAEHL 165

Query: 128 CKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQHG------------HYTTARDMAILS 174
             +E +FV+ MN  +K +GLS  T F NA G+                   TARD A+L+
Sbjct: 166 KGSETQFVKEMNARAKEIGLSDRTVFANASGLPAADLASFAEAATEGETIMTARDSAMLA 225

Query: 175 WRIKTDFPQYMHYFQIKGL--EIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNI 228
             I    P  +     +      K      TN         ++G DG KTG+T ++G+  
Sbjct: 226 RWIMNKHPDLLEVTSQRDFPLPQKDLTLHTTNLMLPGEAHGYVGNDGFKTGYTSSAGYCF 285

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             +A +G   LI+V++G    + R   +  L++ GF  
Sbjct: 286 TGTAARGGNRLISVVMGTESTDQRFTETRKLMNYGFER 323


>gi|229150695|ref|ZP_04278909.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus m1550]
 gi|228632782|gb|EEK89397.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus m1550]
          Length = 416

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLEEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            +K   +   I 
Sbjct: 301 HETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNTEQEAPIKKGVTISKMII 360


>gi|30020579|ref|NP_832210.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29896130|gb|AAP09411.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 437

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 132/367 (35%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAMLSN---IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ I  +M+            A   +     L++ N+G ++ E   D     AS+TK+M+
Sbjct: 15  VLTIFCSMVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMS 74

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSAN 117
            Y+V   + + K      + IS+ A +     S          + T+    + + + SAN
Sbjct: 75  EYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSAN 134

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------H 163
              +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+                  +
Sbjct: 135 GATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLEEKN 194

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGAD 214
             +ARD AIL+ R+  DFPQ ++  +I     +          N NW     +  + G D
Sbjct: 195 KMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVD 254

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N   +    
Sbjct: 255 GLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYG 314

Query: 275 YIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                              + V    + V     +      + +            ++  
Sbjct: 315 KDSVIKGHETVRVANAKEKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNMEQGAPIKEGG 374

Query: 328 LLKNKIT 334
            +   I 
Sbjct: 375 TISKMII 381


>gi|86357959|ref|YP_469851.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
 gi|86282061|gb|ABC91124.1| probable D-alanyl-D-alanine carboxypeptidase protein [Rhizobium
           etli CFN 42]
          Length = 354

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 89/279 (31%), Positives = 138/279 (49%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           LS+     + A+        ++D  +G V+  +  D    PASLTK+MT Y+ F  L E 
Sbjct: 76  LSSALLMCAFAQAEAGQASFVVDAQSGQVLEASNQDDLNYPASLTKMMTLYLAFEALHEG 135

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +      +T+S+NA    P       G  +TL  A++ +IV SAND AVAIAE L  +E+
Sbjct: 136 RLTWDQKLTMSENAESKEPFKLAIGAGRQVTLREAVESIIVLSANDSAVAIAEQLGGSEQ 195

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F + M + +  LG+  T F N  G+      TTARDMA L   +  DFP+    F ++G
Sbjct: 196 TFARTMTDKAHQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRDFPEEFKLFSMRG 255

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            + +G K+   N  +  + G DG+KTG+T ASG+N+V SA++  + L+ V++G    + R
Sbjct: 256 FKFRGMKFRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKDGRRLVGVVMGEKTASLR 315

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
           +   ASLL     + +         K         +   
Sbjct: 316 DDRMASLLDGALPSPSTATASTTPGKQPGATMTDAQPTK 354


>gi|326387759|ref|ZP_08209365.1| Serine-type D-Ala-D-Ala carboxypeptidase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207805|gb|EGD58616.1| Serine-type D-Ala-D-Ala carboxypeptidase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 398

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 77/330 (23%), Positives = 127/330 (38%), Gaps = 8/330 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +      S       P   ++D N+G V+    P   + PASLTK+MT+YV F  +K  K
Sbjct: 29  AAPASPESTMPQVTAPIAMMVDVNSGRVLFARDPHRRFVPASLTKIMTSYVAFELIKAGK 88

Query: 74  AMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             L     +            S       S+ ++ + L+ ++  SAND  V +AE +  +
Sbjct: 89  LRLDQKFVMRPETFHKWHGVGSTMFLGNNSSTSVADLLEGIVTVSANDACVVLAEGIAGS 148

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMH-YF 188
              F   MN  +K +G+  +H+   +G +  G  Y +A D+  LS  + T  P     ++
Sbjct: 149 VPGFTAMMNAEAKKIGMRDSHYNTPNGWMDQGETYVSAADLVALSTALITRHPDLYKRFY 208

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                   G    N N   G   GADG+KTGFT  +G+  V S  +G + +I V+ G   
Sbjct: 209 GHDHATFNGIAQENHNPLYGHTPGADGVKTGFTGEAGYGFVGSVERGGRRVIMVVAGYGR 268

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIIN 305
            N R   S + +   F     R  +    K      Q   + +V  ++            
Sbjct: 269 PNDRADQSRTFVEWAFSAWDSRPILTAGAKVGQAVVQGGSTRQVGLVTPRAYALAVPHGE 328

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                   + K        K   + + I +
Sbjct: 329 APRYTLSIRYKAPLTAPIVKGQEVASLIVR 358


>gi|323490220|ref|ZP_08095437.1| D-alanyl-D-alanine carboxypeptidase [Planococcus donghaensis
           MPA1U2]
 gi|323396116|gb|EGA88945.1| D-alanyl-D-alanine carboxypeptidase [Planococcus donghaensis
           MPA1U2]
          Length = 452

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 37/365 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
            + ++A+ M++ I P    AE           L+D  +G ++ E   + P   AS+TK+M
Sbjct: 16  LIALLAVFMITGITPQQVNAEESLTIMAEAAILVDAESGKILYEKNAEKPLGVASMTKMM 75

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE----YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           T Y++F  ++E K        ++            SN  F++  + T+    + + + SA
Sbjct: 76  TEYLLFEAIEEGKVAWDQEYQVTDYTYRISQDMRLSNVPFREDGSYTIKEMYEAMAIFSA 135

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HG 162
           N   + IAE++  TE +FV+ MN  +K +GL  T F+N+ G+                  
Sbjct: 136 NAATIGIAETIAGTESEFVELMNEKAKEMGLEETTFVNSTGLSNSSLMGMHPEGTKETDE 195

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGA 213
           +   AR +A L+  +  D+P+ +   +I     +          N N      +  + G 
Sbjct: 196 NIMPARAVAKLTKILLDDYPEVLETTKIPLKMFREGTSDETRMENWNSMLPGLIYEYEGV 255

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNK 267
           DG+KTG T  +G++   +A + D   IAV++      GA     R   +  L   GF   
Sbjct: 256 DGLKTGSTDFAGYSFAGTAKRDDTRFIAVVMGAVDSEGAGSYKARFDATRVLFDYGFDEF 315

Query: 268 TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           T  + I    + F +Q+       + E+V    KE +    +  + +  +   +  + + 
Sbjct: 316 TKEELIPAGYQ-FKEQDTLEVEKGVEEKVAIAVKEPVTMMVRTADKELYQPTLVLDDSVV 374

Query: 328 LLKNK 332
                
Sbjct: 375 QNGKL 379


>gi|229178819|ref|ZP_04306179.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus 172560W]
 gi|228604584|gb|EEK62045.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus 172560W]
          Length = 416

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLDEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            +K   +   I 
Sbjct: 301 HETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNTEQEAPIKKGVTISKMII 360


>gi|300816637|ref|ZP_07096858.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           107-1]
 gi|300530867|gb|EFK51929.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           107-1]
          Length = 347

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRTIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KGTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|120601649|ref|YP_966049.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio vulgaris
           DP4]
 gi|120561878|gb|ABM27622.1| penicillin-binding protein 6, Serine peptidase, MEROPS family S11
           [Desulfovibrio vulgaris DP4]
          Length = 441

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 10/330 (3%)

Query: 2   RQF-----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           ++F     +V++ +  +         +E   +    L+D N+  V+ E   D    PASL
Sbjct: 11  KRFPGQLGIVLLVLTFVVASVCGAHASERLNVVSAFLIDQNSRRVLFEQNADAQIPPASL 70

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+++ YV    ++  KA L   + IS  A+    S     +G T++LD  L  + V S 
Sbjct: 71  TKVISMYVALDHIRAGKASLADKVKISARAARTGGSRMFLTRGETVSLDELLMGMAVSSG 130

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND +VA+AE +  +  +FVQ MN  ++ LG++ T F N +G+   G  TTARDM  L+  
Sbjct: 131 NDASVAVAEHIAGSTDRFVQLMNAKARALGMTETTFRNVNGLPAAGQKTTARDMGKLAVN 190

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             T  PQ + Y   + +        N N  +G   GADG+KTG+ CASG+N++++  +G+
Sbjct: 191 YLTAHPQALRYHSTRFIRHNKVITTNKNPMLGNCEGADGLKTGWVCASGYNLISTVKRGN 250

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPN 291
             L+AV+LGA +   R +    L+  G+ +      +    +  +    Y+ +L      
Sbjct: 251 TRLVAVVLGAENSQVRGQEMNRLIDAGYRSLRGEGPSVAAVLPRLSPADYRIDLHKTNSL 310

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
              EV   +K+I     +++  K       
Sbjct: 311 AYAEVSKHKKKIAARKGKLRAGKTGSKQHA 340


>gi|110635386|ref|YP_675594.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mesorhizobium
           sp. BNC1]
 gi|110286370|gb|ABG64429.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Chelativorans
           sp. BNC1]
          Length = 382

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 123/317 (38%), Positives = 193/317 (60%), Gaps = 8/317 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ ++++A+   S +              Y L+D  TG V+A+      W PASLTKLMT
Sbjct: 20  KRQVILLAVFCYSMLHLPALAGP------YVLVDVGTGRVLAQENAFQRWYPASLTKLMT 73

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AYVVF  L+  +  + +P+ IS+NA++ PPS   +  GS +TLDNALK+L+V SANDIA 
Sbjct: 74  AYVVFRELESGRLQINSPVRISQNAAKEPPSKMGYSVGSVLTLDNALKILMVLSANDIAT 133

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AES+  +E+ FV  MN  ++ LG++ +HF+NAHG+     +TTARD+AIL+  ++  F
Sbjct: 134 ALAESVAGSEEAFVARMNAEAQRLGMTDSHFINAHGLPGPSQFTTARDLAILARALRAQF 193

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           PQY  YF I+G+        NTN+ +G F GADGMKTG+ C+SGFN+VA+A +G+++L A
Sbjct: 194 PQYASYFSIEGIRNGKSVKENTNFLIGRFDGADGMKTGYICSSGFNLVATATRGERTLAA 253

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V+LGA  +  R +++A LL+ GF  +         ++   Q  ++ +V +I  E+C+ + 
Sbjct: 254 VVLGAQSQVQRAEIAADLLTRGFETQGLGAPSIVDLRPSEQ--VTEDVADIRPEICSEEA 311

Query: 302 EIINYNTQMKEAKDKES 318
                  +  E +   +
Sbjct: 312 VAKRMKERDDEGRLILT 328


>gi|229073057|ref|ZP_04206247.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus F65185]
 gi|228710062|gb|EEL62046.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus F65185]
          Length = 416

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLEEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            +K   +   I 
Sbjct: 301 HETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNREQEAPIKKGVTISKMII 360


>gi|46581059|ref|YP_011867.1| D-alanyl-D-alanine carboxypeptidase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46450480|gb|AAS97127.1| D-alanyl-D-alanine carboxypeptidase family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311234737|gb|ADP87591.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio vulgaris
           RCH1]
          Length = 441

 Score =  176 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 92/330 (27%), Positives = 157/330 (47%), Gaps = 10/330 (3%)

Query: 2   RQF-----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           ++F     +V++ +  +         +E   +    L+D N+  V+ E   D    PASL
Sbjct: 11  KRFPGQLGIVLLVLTFVVASVCGAHASERLNVVSAFLIDQNSRRVLFEQNADAQIPPASL 70

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+++ YV    ++  KA L   + IS  A+    S     +G T++LD  L  + V S 
Sbjct: 71  TKVISMYVALDHIRAGKASLADKVKISARAARTGGSRMFLTRGETVSLDELLMGMAVSSG 130

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND +VA+AE +  +  +FVQ MN  ++ LG++ T F N +G+   G  TTARDM  L+  
Sbjct: 131 NDASVAVAEHIAGSTDRFVQLMNAKARALGMTETTFRNVNGLPAAGQKTTARDMGKLAVS 190

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             T  PQ + Y   + +        N N  +G   GADG+KTG+ CASG+N++++  +G+
Sbjct: 191 YLTAHPQALRYHSTRFIRHNKVITTNKNPMLGNCEGADGLKTGWVCASGYNLISTVKRGN 250

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPN 291
             L+AV+LGA +   R +    L+  G+ +      +    +  +    Y+ +L      
Sbjct: 251 TRLVAVVLGAENSQVRGQEMNRLIDAGYRSLRGEGPSVAAVLPRLSPADYRIDLHKTNSL 310

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
              EV   +K+I     +++  K       
Sbjct: 311 AYAEVSKHKKKIAARKGKLRAGKTGSKQHA 340


>gi|300926504|ref|ZP_07142297.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           182-1]
 gi|300417465|gb|EFK00776.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           182-1]
          Length = 347

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 11/310 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG ++         NPASLTKLMT YVV   +   +      +T+ ++A       
Sbjct: 1   MDYTTGQILTAGNEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPV 60

Query: 94  ------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    K+G  +++ +  + LIV S ND  VA+A+ +   +++FV+ MNN ++ L L
Sbjct: 61  FVGSSLMFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHL 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WA 206
             THF   HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N   
Sbjct: 121 KDTHFETVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLL 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
               +  DG+KTG T  +GFN++ASA+ G   LIAVI+GA     R + +  LL  G  N
Sbjct: 181 WDKTMNVDGLKTGHTSGAGFNLIASAVDGQHRLIAVIMGADSAKGREEEARKLLRWGQQN 240

Query: 267 KTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            T  + ++   K      +  +  N      +E      +    + + K   D +     
Sbjct: 241 FTTVQILHRGKKVGTERIWYGDKENIDLGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAP 300

Query: 323 FEKITLLKNK 332
                 +   
Sbjct: 301 ISAHQRVGEI 310


>gi|168186263|ref|ZP_02620898.1| penicillin-binding protein DacF [Clostridium botulinum C str.
           Eklund]
 gi|169295681|gb|EDS77814.1| penicillin-binding protein DacF [Clostridium botulinum C str.
           Eklund]
          Length = 392

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 79/337 (23%), Positives = 151/337 (44%), Gaps = 13/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + +++   + N+      A   +     L++  TG VI E      + PAS+TK+MT  +
Sbjct: 15  VTLMSQFCIVNVMAADKTALDVEAKAGLLIEPTTGKVIFEKNVHEKFAPASVTKIMTMLL 74

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAV 121
               +   K  L+  + +S+NA +   +   +     G   T+++ LK + + S ND A 
Sbjct: 75  TMEAVDSGKIKLSDTVVVSENAKKMGGNGSSSMLLDTGEVRTVEDLLKGVAIASGNDAAT 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD- 180
           A+AE +  +E  FV+ MN  ++ LG+  T F N HG+   GH T+A D++I+S  +    
Sbjct: 135 ALAEYIGGSESSFVEMMNKRAQELGMKDTTFKNCHGLSADGHLTSAYDISIMSRELLKHK 194

Query: 181 ---FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                   +   I     +  +  N N  V  + G DG+KTGFT  + + I A+A++ + 
Sbjct: 195 KILKYSGTYMETISEGRKQPIELVNHNKLVRFYKGCDGLKTGFTNEAKYCISATAVKNNI 254

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY----QQNLSNEVPNIS 293
            ++A+I+GA     RN+ ++ L++ GF     +K +            ++          
Sbjct: 255 RMLAIIVGAPTYKIRNRDASMLMNYGFSKFESKKVVTKDTDVEKITLDKKGEKFFFAKAK 314

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +++    +  +      K   DK      ++K  ++ 
Sbjct: 315 DDLNLVLERGVKNKITKKCVLDKNKKE--YKKGEIIG 349


>gi|209545022|ref|YP_002277251.1| Serine-type D-Ala-D-Ala carboxypeptidase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532699|gb|ACI52636.1| Serine-type D-Ala-D-Ala carboxypeptidase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 420

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 145/264 (54%), Gaps = 1/264 (0%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F + +  A +   F   + A+        ++D  TG +++++ PD    PASLTKLMT Y
Sbjct: 77  FGLSVGCAAVMAGFVPRAHAQYVGQISSIVMDARTGAILSQSNPDLQRFPASLTKLMTLY 136

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  L   +  L   + +S +++   PS      GS +T++ A+  L+ KSAND A A+
Sbjct: 137 LAFKALHAGQITLDQSVPVSAHSASMEPSKLGLMPGSYLTVEQAVLGLVTKSANDAACAL 196

Query: 124 AESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
            E +   ++  F   M   ++ LG++ T F NA G+      T+ARD+A+L+ +I T+FP
Sbjct: 197 GELMGGGDEGRFADLMTRQARALGMTRTTFRNASGLPNDEQVTSARDLALLTRQIITEFP 256

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
            Y HYF +      G++ PN +  +  + GADG+KTG+T  +G N+V SAI+ +  LI V
Sbjct: 257 DYYHYFSVPAFYFHGRQVPNHDPMLRIYPGADGLKTGYTTDAGRNLVTSAIRENVRLIGV 316

Query: 243 ILGALDRNTRNKVSASLLSMGFYN 266
           +LGA     R+ V AS+L  GF  
Sbjct: 317 VLGARTNPQRSAVMASILDDGFRQ 340


>gi|169831557|ref|YP_001717539.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638401|gb|ACA59907.1| Serine-type D-Ala-D-Ala carboxypeptidase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 376

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 86/353 (24%), Positives = 146/353 (41%), Gaps = 28/353 (7%)

Query: 4   FLVIIAMAMLSNIFPFLS--------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
             ++I +  L       +                   L+D  TGHV+         +PAS
Sbjct: 9   LTLLIVVFALLGPQSASAEPSADSTMKPPRVTADAAVLVDVETGHVLFAKNERQRKDPAS 68

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           LTK+MTA V     +         +T+S+  A     S    + G  +TL+N LK  ++ 
Sbjct: 69  LTKVMTAIVALEAGRPG-----DVVTVSERAARFGRGSVIDLRAGEKITLENLLKAALIM 123

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND  +AIAE +      FV+ MN  ++ LG   T FMN HG     HY+TA D+A ++
Sbjct: 124 SANDSTIAIAEHVAGDYDLFVRWMNLKARQLGAHDTRFMNTHGFTHPNHYSTAADLAEIT 183

Query: 175 WRIKTDFP-----QYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNI 228
                        +            + +   NTN  + +   G DG+KTG T A+G  +
Sbjct: 184 RYALRIPQFAALVRTREITVYWRDSDRKRTIRNTNRLLRSDFEGIDGVKTGTTSAAGHCL 243

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF-----YNKTDRKKINYIIKDFYQQ 283
           +ASA +  + ++AV+L +     R   +  LL+ GF        T   +I  ++     +
Sbjct: 244 IASATRDGRRVLAVVLHSDG---RYLDARRLLTYGFALEPVEVATRGDQITRLLVREGVR 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                VP  +  +   + ++     +++  K  E+     EK+  +  +I  +
Sbjct: 301 PDVIVVPAETVRLYIPEAQLPALEKEVRLKKTLEAPIAPGEKLGEMAFRINGR 353


>gi|150396261|ref|YP_001326728.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
 gi|150027776|gb|ABR59893.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
          Length = 494

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 92/252 (36%), Positives = 138/252 (54%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I +A L  +    + A  N      ++D  TG V+     D    PASLTK+MT Y+ F 
Sbjct: 31  IFLAGLIVVLTLSAPALANSKYAGIVVDAKTGKVLYGEDADQLRYPASLTKMMTLYLTFE 90

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L+  +   +TP+  SK AS  PPS    + G ++T++ A+  L+ +SAND A A+AE L
Sbjct: 91  ALEAGRINKSTPVPFSKKASAEPPSKLGVRAGRSITVEQAILSLVTRSANDSATALAELL 150

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E++F + M N ++ LG++ T + NAHG+      TTARD A L   ++  FPQY  Y
Sbjct: 151 GGSEQRFARMMTNKARALGMTRTTYRNAHGLPNSEQRTTARDQARLGIALRQHFPQYYDY 210

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +      +   N N  +G   G DG+KTG+T ASGFN+V SA  G +S++AV++G  
Sbjct: 211 FSTRSFRFGKQTIGNHNRLLGNVRGVDGIKTGYTRASGFNLVTSAQLGGRSIVAVVMGGT 270

Query: 248 DRNTRNKVSASL 259
              +R+     L
Sbjct: 271 SGGSRDAQMRKL 282


>gi|118443387|ref|YP_878099.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
 gi|118133843|gb|ABK60887.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
          Length = 392

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 79/338 (23%), Positives = 153/338 (45%), Gaps = 13/338 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + +++   + N+    + A   +     L++  TG +I E      + PAS+TK+MT  +
Sbjct: 15  VTLMSQICVVNVMAAENTALDVEAKAGLLMEPTTGKIIFEKNVHEKFAPASVTKIMTMLL 74

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAV 121
               +   K  LT  + +S+NA +   +   +     G   T+++ LK + + S ND A 
Sbjct: 75  TMEAVDSGKIKLTDTVVVSENAKKMGGNGSSSMLLDTGEVRTVEDLLKGVAIASGNDAAT 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD- 180
           A+AE +  +E  FV+ MN  ++ LG+  T F N HG+ + GH T+A D++I+S  +    
Sbjct: 135 ALAEYIGGSESSFVEMMNKRAQELGMKDTTFKNCHGLSKEGHLTSAYDISIMSRELLKHK 194

Query: 181 ---FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                   +   I     +  +  N N  V  + G DG+KTGFT  + + I A+A++ + 
Sbjct: 195 KILKYSGTYMETISEGRKQPIELVNHNKLVRFYKGCDGLKTGFTNEAKYCISATAVRDNI 254

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY----QQNLSNEVPNIS 293
            ++A+I+GA     RN+ ++ L++ GF     +K +            ++          
Sbjct: 255 RMLAIIVGAPTYKIRNRDASMLMNYGFSKFESKKVVAKDSDVEKITLDKKGEKFFFAKAK 314

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
           +++    +         K   DK      +++  ++ N
Sbjct: 315 DDLNLVLERGTKNKITKKCVLDKGKKE--YKRGEIIGN 350


>gi|114566442|ref|YP_753596.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114337377|gb|ABI68225.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 373

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 26/349 (7%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F      +I+ +  +  I   ++ A     PYY L+D  +G +I  +  D     AS
Sbjct: 1   MRGFSKGIRFIILLLLFMGLIASPVNAAPYISSPYYCLMDGGSGQLILSSNGDETRPVAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K+MTA +   +       +    T+S  A+  P  +   K    +T+   LK+ +++S
Sbjct: 61  TVKMMTAILTIEYA-----GMDEEATVSSKAARTPEYSIGLKAEQRITVGELLKVALIRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           +ND AV +AE +   E  F   M+  +  +G S T F NA G+     ++T  D+A +  
Sbjct: 116 SNDAAVVLAEHIAGDESLFAHLMSKKAFLIGASNTRFSNASGLPGGEQFSTCSDLAQIGR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKY------PNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                 PQ       +  + K   Y       NTN  +G++ GADG+KTG   A+G  +V
Sbjct: 176 Y-AQSHPQIKELVATRQSDFKHPSYSQPLRISNTNPLLGSYQGADGIKTGTANAAGKCLV 234

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
           ASA +  + LIAV+L + D   R    A LL+ GF +   ++ IN        + L+ + 
Sbjct: 235 ASATRDGRHLIAVVLKSSD---RAGDCARLLNYGFKDSYYQQIINASTPFKELRVLNAKT 291

Query: 290 PNIS----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           P +      ++        N     K+   K        K   + + + 
Sbjct: 292 PKVKIYPARDLYLWV--GDNSPDIEKKVNMKYELQAPLSKGQEVGSLVV 338


>gi|302392427|ref|YP_003828247.1| serine-type D-Ala-D-Ala carboxypeptidase [Acetohalobium arabaticum
           DSM 5501]
 gi|302204504|gb|ADL13182.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acetohalobium arabaticum
           DSM 5501]
          Length = 383

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 16/322 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +S           ++D  TG V+          PAS TK+MT  +           L T 
Sbjct: 26  VSAKPDITARSAIVVDVKTGEVLYAKNHHERRPPASTTKIMTGILAIEN-----GNLDTE 80

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T+S  A+    S+     G T+ L+  L  L++ S ND AVAIAE +  + + F   MN
Sbjct: 81  VTVSDRAAYTGGSSIWLTSGETLKLEELLYGLLLNSGNDAAVAIAEHIGGSVEGFAWMMN 140

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI-KGLEIKGK 198
             ++ +G   T F N +G+ Q+GH TTA D+A+++     +         + K +  +G 
Sbjct: 141 RKAREIGALNTTFQNPNGLPQNGHLTTAYDLALITRYALQNDTFAKIVRTVRKTISWEGH 200

Query: 199 KYP----NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +Y     NTN  +  F   DG+KTG+T A+G  +V++A   ++ +++V+L +        
Sbjct: 201 EYGRSLLNTNRLLRKFDKVDGVKTGYTDAAGRCLVSAASADNRQVVSVVLKSG---QMWH 257

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            S  LL+ G  N    + I+           +    EV  I+ +               K
Sbjct: 258 DSIKLLNYGLDNFKQIELISKDETAHTIRINEAKKEEVDLIAAKEFGIVIPQDEDVEIKK 317

Query: 312 EAKDKESHFIDFEKITLLKNKI 333
           E + +    +  EK   +    
Sbjct: 318 EVRVQNDLKLPIEKGEQVGKLT 339


>gi|325127981|gb|EGC50880.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           N1568]
          Length = 389

 Score =  175 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 142/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|325137739|gb|EGC60314.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           ES14902]
          Length = 389

 Score =  175 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 78/349 (22%), Positives = 141/349 (40%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +  +++    
Sbjct: 5   KILPVLLSIILGISHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A+LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNISEEVCTT---QKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +                  T  +  +  +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKTTEQILETIQPIPAPVKKGQILGKI 353


>gi|308171901|ref|YP_003918606.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307604765|emb|CBI41136.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus amyloliquefaciens DSM 7]
 gi|328551709|gb|AEB22201.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
           TA208]
          Length = 443

 Score =  175 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 37/367 (10%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L       +S      +           +++ ++G ++     D     AS+TK+MT Y+
Sbjct: 18  LTATCFVPMSKAEAAGNDPIDVNASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYL 77

Query: 65  VFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +   +KE K            + + + +   SN   +K    T+    + + + SAN  A
Sbjct: 78  LLEAIKEGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQAMAIYSANGAA 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--------------TT 166
           +A+AE L  TE KFV  MN  +K LG++   F N+ G+V    +               +
Sbjct: 138 IAVAEILAGTETKFVAKMNAKAKELGMTNYDFKNSTGLVNEDLHGKQPQGEGVKEESEVS 197

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVG----TFLGADGMK 217
           A+DMA+L+ R+ TD+P+ +    I   + +         PN N+ +      + G DG+K
Sbjct: 198 AKDMALLADRLITDYPEVLKTTSIAKTKFRAGTDDEMDMPNWNFMLKGLVSEYPGVDGLK 257

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFY-NKTDRKKIN 274
           TG T ++G    ++A +    +I V+L A       R   +  +L   F  N + +    
Sbjct: 258 TGSTDSAGSCFTSTAQRNGMRVITVVLNAKGNLHTGRFDETKKMLDYAFNSNFSMKDLYP 317

Query: 275 YIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
              +          +           + +    K     N + +   DK+      +K T
Sbjct: 318 EGSQVKGHKTIDVDKGKDKQVDIVTDKALSIPVKSGDEKNYKAEVTLDKKEITAPVKKGT 377

Query: 328 LLKNKIT 334
            +     
Sbjct: 378 KVGTLTV 384


>gi|225175400|ref|ZP_03729395.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225169152|gb|EEG77951.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 426

 Score =  175 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 82/344 (23%), Positives = 136/344 (39%), Gaps = 23/344 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
             LV+  + +L N     +              L+D  TG V+ E        PAS+TK+
Sbjct: 10  ILLVVSLIYLLINPVATWAETTAFPELNSQAAVLIDAQTGQVLFEKNMHQVLYPASITKI 69

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF---KKGSTMTLDNALKLLIVKSA 116
           MT  +           L   IT+S+ A      N++         +TL+ AL  L ++S 
Sbjct: 70  MTGIIALEE-----GNLDDTITMSREAVFSIGRNTSHVALDVDEELTLEQALYALAIESG 124

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A  IAE +    + F Q MN  +   G   T+F NAHG+    HYTTA DMA++  +
Sbjct: 125 NDAANGIAEHISGDVESFAQLMNKRAAEYGAKNTNFTNAHGLPDSDHYTTAYDMALILKQ 184

Query: 177 IKTDFPQYM------HYFQIKGLEIKGKKYPNTN---WAVGTFLGADGMKTGFTCASGFN 227
              +           +       + + + + N N               KTG+T  +G  
Sbjct: 185 AVKNPAFREIFSARNYEMPPTNKQPESRHFRNRNSLLSGRYEDAEILASKTGWTTLAGHT 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS- 286
           +V +A Q ++ LIAV+L + DR +R   +  LL  GF   ++       +      ++S 
Sbjct: 245 LVTAARQENRELIAVVLNSQDRRSRYDDTIKLLDYGFNQFSEVSFSMEELTALIMPSVSF 304

Query: 287 --NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
              E+ NI  +    +    + +        +     D E + +
Sbjct: 305 EEAEILNIEADQKMDRLLHKSLSVDDIIISHQIKDNHDNELVEV 348


>gi|301630478|ref|XP_002944344.1| PREDICTED: d-alanyl-D-alanine carboxypeptidase dacC-like, partial
           [Xenopus (Silurana) tropicalis]
          Length = 294

 Score =  175 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 136/268 (50%), Gaps = 8/268 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                       Y L+D   G V+A    D P   ASLTKLMT Y+VF  L+ KK  L  
Sbjct: 27  ATPQPPEVAARNYLLVDVTAGQVLAAKDIDAPVEQASLTKLMTGYLVFDALRAKKIALAQ 86

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A + P S         + +D+ LK +IV+S ND  VA+AE +  + + FV  M
Sbjct: 87  KLPVSERAWKMPGSRMFIDPKMQIPVDDLLKGMIVQSGNDATVALAEGVGGSVENFVHLM 146

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG++ T + N  G+ + GH TTA+D+A+L  R+  DFP+YMHY+  +     G 
Sbjct: 147 NEQARALGMTGTSYKNPEGLTEPGHSTTAKDLALLVQRLMQDFPEYMHYYATRHYAYPGT 206

Query: 199 KYPNTNWAVG---TFLGADGMKTGFTCASGFNIVASAIQ-----GDQSLIAVILGALDRN 250
              N N            DG+KTG+T A+G+ +VA++ +     G + L++++LG    N
Sbjct: 207 PKSNGNNRNTLLFRDPTVDGLKTGYTAAAGYCLVATSRREFPQLGQRRLLSIVLGTASEN 266

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIK 278
            R+  S  LL+ G+      K  +    
Sbjct: 267 ARSNESQKLLNWGYTAFDAVKLFDAGQP 294


>gi|300021591|ref|YP_003754202.1| serine-type D-Ala-D-Ala carboxypeptidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523412|gb|ADJ21881.1| Serine-type D-Ala-D-Ala carboxypeptidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 360

 Score =  175 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 105/304 (34%), Positives = 162/304 (53%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             T       L + +TG V+     D  W PASLTKL TAY+ F  +K+ K  LT  I  
Sbjct: 19  PITASAGPALLFELSTGKVLYSEDIDDVWYPASLTKLTTAYLAFQAIKDGKLRLTDKIPC 78

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S  A+  PPS +    G T+T++ AL+ +IVKSAND+ V +AE++  +E  F++ MN T+
Sbjct: 79  SLVATLQPPSKAGLNVGDTLTVEQALQAVIVKSANDVTVMLAEAISGSETNFIEQMNATA 138

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           + LG++ THF N +G+   G  T+ARD+A ++  I TDFP+Y  Y+ +  + I  ++  +
Sbjct: 139 QRLGMTRTHFDNTNGLPSPGQLTSARDLARIARAIVTDFPEYASYWSMPAMRIGKRRLGS 198

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  + TF GADGMKTGFTC SG+N+ ASA +  + L+A++LG    N R   SA+LL  
Sbjct: 199 HNALLKTFPGADGMKTGFTCDSGYNVAASATRDGRRLVAIVLGESSGNERAVRSAALLEY 258

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           GF     +   N    D    + +++      +          +  +  + + K      
Sbjct: 259 GFQYYDWKAMFNMPTIDTLPVDPNSKGVLSVRDTVAATSCGGGHRHRGAKHRAKGKLTAK 318

Query: 323 FEKI 326
            + I
Sbjct: 319 NKAI 322


>gi|229112950|ref|ZP_04242457.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-15]
 gi|228670493|gb|EEL25829.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock1-15]
          Length = 442

 Score =  175 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 136/375 (36%), Gaps = 42/375 (11%)

Query: 2   RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ I+ +  L                 A   +     L++ N+G ++ E   D     
Sbjct: 12  KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYEKSADESLAI 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALK 109
           AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+    +
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYE 131

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
            + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+           
Sbjct: 132 AMAIYSANGATIALVEQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHSE 191

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA---- 206
                  +  +ARD AIL+ R+  DFP+ ++  +I     +          N NW     
Sbjct: 192 GTTLDEKNKMSARDCAILAQRLIQDFPKILNTAKIPKKTFQEGGKYPIDMANFNWMLKGL 251

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N
Sbjct: 252 IKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFAN 311

Query: 267 KTDRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +            +          + V    + V     +      + +     +  
Sbjct: 312 FEVKNFYGKDSVIKGYETVRVANAKDKDVVVQTKQAVSLPMSKGNKDIYKKEFKVLNKEQ 371

Query: 320 FIDFEKITLLKNKIT 334
               +K   +   I 
Sbjct: 372 EAPIKKGVTISKMII 386


>gi|251797290|ref|YP_003012021.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. JDR-2]
 gi|247544916|gb|ACT01935.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. JDR-2]
          Length = 425

 Score =  175 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 79/349 (22%), Positives = 139/349 (39%), Gaps = 34/349 (9%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAETN------------------------KLPYYTLL 34
           MR+   L+ +   +L  + P    AE                                L+
Sbjct: 1   MRRLPGLIAMMFIILVLLAPVPVFAEEALQAPDEEQIEQPADQLAEQLPETPHSEAAILI 60

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G V+          PAS+TK++T  +V           T  +T+SK A     +  
Sbjct: 61  DAKSGAVLFAKNETERLYPASITKIVTGIIVLEQS-----NPTDIVTVSKTARGEDGTRI 115

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
              +G    + + ++ +++ S ND A AIAE +  T+++F + MN   + LGL  T+F+N
Sbjct: 116 YLAEGEQKPMLDLIEGMLINSGNDAATAIAEHIDGTKEQFAERMNEFVRKLGLWDTNFVN 175

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---NTNWAVGTFL 211
             G+     YTTARDMA ++     +              +  +      N N  +G++ 
Sbjct: 176 PSGLPDENQYTTARDMAKIAQYAMQNEQFRQVVATKSKPWVGEEWVSKLENHNKMLGSYD 235

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           GA G+K GFT A+G+ +V++A +GD  LI VIL     +   K    LL  GF + T  +
Sbjct: 236 GAIGVKNGFTQAAGYTLVSAAQRGDMELIGVILKGATDSGVYKDMTQLLDYGFAHFTSMQ 295

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
            +    K  +    + +      +              +    + +++ 
Sbjct: 296 VMAADEKRTFVTRDTGKPVEFIADKPFYVTIKDGVEPTVAVDSNGKAYV 344


>gi|309379439|emb|CBX22006.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 388

 Score =  175 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 76/348 (21%), Positives = 142/348 (40%), Gaps = 17/348 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFL-------------SIAETNKLPYYTLLDTNTGHVIAENYPD 48
           +   ++I + + ++  P                         + ++D  +   ++    D
Sbjct: 5   KALSILIPIILAASPAPTALSSNRLPVRAASSPQTPETLAAAHIVIDLQSRQTLSAKNID 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
            P  PA+L +LMTAY+VF  LK         + I ++A +   S    + G ++  D  L
Sbjct: 65  APVEPAALAQLMTAYLVFKNLKSGNIRPEETLKIRESAWKSEGSRMFVRPGGSVRTDTLL 124

Query: 109 KLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           K +IV SAND A+ +A      + + FV+ MN  +++LG+  T F N  G+ + G  +TA
Sbjct: 125 KGMIVLSANDAALTLAGRLGNGSIENFVKQMNEEARHLGMKNTVFKNPTGLSREGQVSTA 184

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +D+A+LS  +  DFP+Y   F IK  + +  +  N N  +    G +G+K G T + G+N
Sbjct: 185 KDLAMLSEALMRDFPEYYPLFSIKSFKFENIEQNNRNTLLYRDSGVNGLKAGHTESGGYN 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           +  S     + ++ + LG+     R   ++ LL+    +    K  +        Q    
Sbjct: 245 LAVSYSGNGRHILVITLGSESAEIRAADTSKLLNRALQSFDTPKIHSAGEIVTKIQVFGG 304

Query: 288 EVPNISE---EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               +     +            T  +  +  +       K  +L   
Sbjct: 305 SKKTVRAGFPKAAYITVPHDGVKTAEQILETIQPLRAPVRKGQVLGKI 352


>gi|258514292|ref|YP_003190514.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257777997|gb|ACV61891.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 409

 Score =  175 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 78/345 (22%), Positives = 134/345 (38%), Gaps = 22/345 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +  + II +  L      +    A         L+D     ++          PAS TK+
Sbjct: 4   KHIIGIIFLIYLLAFAAPVFADDAPDITGMTAVLMDAQNMQILYNKDMQERMYPASTTKI 63

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +T  +     K     +   I +S  A+    +N   ++G  +TL + L  L++ S+ND 
Sbjct: 64  LTGIIAIEKGK-----MDDLIPVSWEAANTEGTNIGLQEGEKLTLRDLLYALLLSSSNDA 118

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A AIAE   K+   F   MN  +K +G   +HF N HG+    HYTTA D+A+++     
Sbjct: 119 AEAIAEHYGKSADNFAVMMNQKAKEIGAVHSHFTNPHGLPDEDHYTTAYDLALIARYAMQ 178

Query: 180 DFP-----QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
           +       +       +      K   N N  +  + GA G+KTG+T A+G  I A   +
Sbjct: 179 NDKFREIVREKEITIARVDPEGQKYMVNHNKLLSRYEGAIGIKTGYTVAAGQCIAAEVKR 238

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPN 291
            D+ LIAV+L +   N     + +L + GF +  +   +       +          V  
Sbjct: 239 DDRELIAVVLKSEG-NDLWTDTENLFNYGFNSFRNIYLVKRGQVMGQAEVSNGSLKAVSL 297

Query: 292 ISEEV---CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           +++         K       ++   K+        +K   L   I
Sbjct: 298 VTDRDFTWNLPTKNGNELKRRLVLNKN---IKAPLKKGQKLGELI 339


>gi|304405771|ref|ZP_07387429.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
 gi|304345014|gb|EFM10850.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
          Length = 437

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 69/347 (19%), Positives = 131/347 (37%), Gaps = 26/347 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +                  L++  TG V+ E   D    PAS+TK+MT Y+V   +K  +
Sbjct: 41  ATASAGTGNPLGINAKAAILMEPTTGQVLYELNADEALPPASMTKMMTEYIVLEEIKAGR 100

Query: 74  AMLTTPITISKN--ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               T ++ S          S     +G   T+      + V SA+D  +A+A  +  + 
Sbjct: 101 LTWDTVVSTSAEAATVPPDGSQVYLAEGEKHTVKELYIAMAVGSASDATIALAVQIGGST 160

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             FV  MN T++ LGL++ HF    G+ +     +ARDMA L+  I  + P+++ Y  I 
Sbjct: 161 AGFVDKMNETAQKLGLTSAHFTGPSGL-EETTVISARDMAKLASTIILNDPEFLTYSSIP 219

Query: 192 GLEIKGKKY---PNTNWAVGT-----------FLGADGMKTGFTCASGFNIVASAIQGDQ 237
             + + +      N NW +G+           + G DGMKTG+  A+G+    +      
Sbjct: 220 RYKFRERDQGELINYNWMLGSNKNSEELKSFAYPGVDGMKTGYIGAAGYCFTGTVEVNGL 279

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-------DFYQQNLSNEVP 290
             ++V++    +  R + +A L   G+ +   +  +    +          +    +   
Sbjct: 280 RYVSVVMNTKTKQARFRETAKLYDFGYASFEKKTIVAPKSEVESVKTVKITKGKSKSVPV 339

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKE--SHFIDFEKITLLKNKITK 335
               +V    K+       + +             ++   L     +
Sbjct: 340 ITGTDVSFLVKKGTEAKATVLKTNLLPEKQLVAPIKQGQKLGTVTYE 386


>gi|296116795|ref|ZP_06835401.1| D-alanyl-D-alanine carboxypeptidase [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295976596|gb|EFG83368.1| D-alanyl-D-alanine carboxypeptidase [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 402

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 91/266 (34%), Positives = 145/266 (54%), Gaps = 3/266 (1%)

Query: 3   QFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +  +++A  +++ +F     + A+        ++D  TG V++++  D    PASLTKLM
Sbjct: 33  KVSLLVAGGLVAGLFGGAGQARAQYVGQISSIVMDARTGTVLSQSNADLRRFPASLTKLM 92

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L+  +  L   + +S +A+   PS    + GS +T++ A+  L+ KSAND A
Sbjct: 93  TLYLTFKALRAGRITLDQVVPVSAHAASMEPSKLGLRPGSYLTVEEAILALVTKSANDAA 152

Query: 121 VAIAESLCKTEK-KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            A+ E L    +  F Q M   +  L ++ T F NA G+      T+ARD+A L+  I  
Sbjct: 153 CALGEFLGAGSESTFAQIMTQQAARLSMNDTSFRNASGLPNEEQMTSARDLATLARHIAL 212

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           DF +Y HYF +     +G+  PN +  + ++ GADG+KTG+T  +G N+V SA++ +  L
Sbjct: 213 DFGEYYHYFAVPAFYFRGRYVPNHDPMLKSYPGADGLKTGYTAVAGHNLVTSAVRDNVRL 272

Query: 240 IAVILGALDRNTRNKVSASLLSMGFY 265
           I V+LGA    TRN V A LL   F 
Sbjct: 273 IGVVLGAPSNETRNAVMADLLDDSFR 298


>gi|229127885|ref|ZP_04256871.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-Cer4]
 gi|228655650|gb|EEL11502.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus BDRD-Cer4]
          Length = 416

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETDPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLEEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            ++   +   I 
Sbjct: 301 HETVRVANAKEKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNMEQGAPIKEGGTISKMII 360


>gi|300022145|ref|YP_003754756.1| serine-type D-Ala-D-Ala carboxypeptidase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299523966|gb|ADJ22435.1| Serine-type D-Ala-D-Ala carboxypeptidase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 583

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 9/336 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R+      + +  +       A   +     +LD N+G V+  +  D   +PASLTK+MT
Sbjct: 3   RRAFAFALLCLAFSGAVPARAAAAPQKHAAFVLDVNSGAVLHNDDGDAIRHPASLTKMMT 62

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  ++  +  ++  ITIS  A+   PS    K G+ +++ +++K ++ KSANDIAV
Sbjct: 63  LYLTFELIESSRLKMSDMITISDRAANAAPSKLDLKPGAQISVADSIKAVVTKSANDIAV 122

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE +  TE  FV+ MN  +++LG++ THF N  G+    H +TA DMAIL+ R+  DF
Sbjct: 123 ALAEKIGGTEANFVRLMNTRARDLGMTKTHFENPSGLPDDDHVSTAHDMAILALRLMDDF 182

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P +   F  +    +GK Y N N  + TF G DG+KTG+T ASGFN+V S  +G + L+ 
Sbjct: 183 PAHYQVFSTRTFAYRGKSYRNHNTMLNTFQGVDGIKTGYTRASGFNLVTSVHRGGRHLVG 242

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRK-----KINYIIKDFYQQNLSNEVPNISEEV 296
           V+ G      RN     LL+  F   +  K      +  +          ++       V
Sbjct: 243 VVFGGSTAAARNAEMRVLLTKAFTRASTAKTRKPMLVAKLKGAPKAAPRPSQRTPKPTNV 302

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + E ++     + A+ K         I + K K
Sbjct: 303 AAAEPEPLSAKPAPRFAEAKSRET----PIQIFKVK 334


>gi|315122117|ref|YP_004062606.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495519|gb|ADR52118.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 282

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 203/265 (76%), Positives = 229/265 (86%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL+ I   +L  I+PF +IAE N LPYYTLLD+NTGHVIAEN PD  WNPASLTKLMTAY
Sbjct: 11  FLIRITALILIGIYPFQAIAEENNLPYYTLLDSNTGHVIAENNPDKLWNPASLTKLMTAY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           VVFSFL++KK  L TPITISKNASE PPSNSTFKKGS +TLDNALKLLIVKSANDIAVAI
Sbjct: 71  VVFSFLEQKKITLETPITISKNASEQPPSNSTFKKGSILTLDNALKLLIVKSANDIAVAI 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AESLC TE++FV+HMN++++ LGL  T FMN+HGVVQ+GHYTTARDM ILSWRIKT F Q
Sbjct: 131 AESLCNTEEEFVKHMNDSAQTLGLLRTKFMNSHGVVQNGHYTTARDMTILSWRIKTHFSQ 190

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           Y HYFQIKGL+IK KKYPNTNWA+G FLGADGMKTGFTCASGFNIVASA QG++SLI V+
Sbjct: 191 YAHYFQIKGLKIKNKKYPNTNWAIGIFLGADGMKTGFTCASGFNIVASASQGNRSLITVV 250

Query: 244 LGALDRNTRNKVSASLLSMGFYNKT 268
           LGALDR++RN++S  LLS GF  K 
Sbjct: 251 LGALDRDSRNQISEKLLSAGFDKKN 275


>gi|312113074|ref|YP_004010670.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218203|gb|ADP69571.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 367

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 105/325 (32%), Positives = 166/325 (51%), Gaps = 10/325 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            +L  +  FL  A+        L +  TG V+     D PW PASLTKLMTAY+ F  ++
Sbjct: 11  LILCGMAAFLFGAQGAVAGPALLTEPATGLVLYAEDADLPWRPASLTKLMTAYLTFEAIR 70

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           + +      +T +  +   PPS      G+ + +D A+K LIVKSAND+A+ +AE +  +
Sbjct: 71  DGRLSPEDMLTSTALSRSQPPSKFGLPLGAQIKVDLAIKALIVKSANDVAIMLAEKIGGS 130

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---------HYTTARDMAILSWRIKTDF 181
            + FV  MN T+K LG++ T F+N +G+ Q             TTARDMA+LS  I  +F
Sbjct: 131 SEAFVDQMNRTAKRLGMTNTKFVNPNGLPQFNPDGTETPEQAVTTARDMALLSNMILKEF 190

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           PQY   F +  + +  +   + N  + ++ GADGMKTGF CA+G+N+VASA +  + L+A
Sbjct: 191 PQYTPIFSMTEVRVGNRLLTSHNGILKSYDGADGMKTGFVCAAGYNVVASATRNGRQLVA 250

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP-NISEEVCTTQ 300
           V+LG      R   +A+L   GF     +  +   +  +  +      P ++   VC+ +
Sbjct: 251 VVLGERSSGARTIRAAALFEHGFEIYPWKAVLAPTLATWPVETPEGAQPADMRGIVCSGR 310

Query: 301 KEIINYNTQMKEAKDKESHFIDFEK 325
           K  ++   + K    +  H     K
Sbjct: 311 KPAVSAKQKSKRPASQPGHGASTAK 335


>gi|325144238|gb|EGC66544.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           M01-240013]
          Length = 389

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 142/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|325293678|ref|YP_004279542.1| D-alanyl-D-alanine carboxypeptidase [Agrobacterium sp. H13-3]
 gi|325061531|gb|ADY65222.1| D-alanyl-D-alanine carboxypeptidase [Agrobacterium sp. H13-3]
          Length = 433

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/257 (33%), Positives = 134/257 (52%), Gaps = 1/257 (0%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A+A    I    +         + ++D NTG V+A    D   +PASLTK+MT Y+ F
Sbjct: 14  VFALAFFCAILSLQASPAQ-AGYAHFIMDANTGKVLAAQNADVLNHPASLTKMMTLYMTF 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L   +      I +S+N +   PS    ++G T T+  A+  +IVKSAND+A  + + 
Sbjct: 73  EALHAGRIRWDQKIRMSRNGAAVIPSKLYVREGQTFTVREAVYGMIVKSANDMAEGMGDH 132

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L  +E +F Q M   ++ LG++ T F NA G+      TTARDMA L   ++ DFP+   
Sbjct: 133 LGGSEAQFAQMMTRKARQLGMTKTVFRNASGLPSKSQVTTARDMAKLGLALQRDFPKEYG 192

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            F ++    +GK+    N  +  + G DG+KTG+T ASGFN+V++     + ++ V+LG 
Sbjct: 193 LFAMESFSFRGKRIRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGG 252

Query: 247 LDRNTRNKVSASLLSMG 263
                R+   A+LL   
Sbjct: 253 KTARGRDAQMAALLDKA 269


>gi|159184788|ref|NP_354511.2| penicillin-binding protein [Agrobacterium tumefaciens str. C58]
 gi|159140076|gb|AAK87296.2| penicillin-binding protein [Agrobacterium tumefaciens str. C58]
          Length = 499

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/255 (33%), Positives = 135/255 (52%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            V + +A        +  A+ +      ++D  +G V+    PD    PASLTK+MT Y+
Sbjct: 28  FVALTLAAAFIAATSVQTAKADPKYAGIVIDAKSGKVLYGEDPDGLRYPASLTKMMTLYL 87

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  L   +  L + +T+S NA++ PPS    + G ++T++ A+  L+ +SAND+A A+ 
Sbjct: 88  TFEALNSGRISLDSRVTVSANAAKEPPSKLGVRAGGSVTVEQAILALVTRSANDMATALG 147

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +E +F + M   ++ LG++ T + NA+G+      TTARD A L   ++  FPQY
Sbjct: 148 EHLGGSEDRFARMMTAKARALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQY 207

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +      +   N N  VGT  G DG+KTG+T A+G N+  SA    +S++AV+L
Sbjct: 208 YGYFSTRTFNFGKQVIGNHNRLVGTVKGVDGIKTGYTRAAGSNLATSAQLDGRSIVAVVL 267

Query: 245 GALDRNTRNKVSASL 259
           G      R+     L
Sbjct: 268 GGRSSAARDATMRKL 282


>gi|296534465|ref|ZP_06896895.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseomonas cervicalis
           ATCC 49957]
 gi|296265208|gb|EFH11403.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseomonas cervicalis
           ATCC 49957]
          Length = 305

 Score =  175 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 132/236 (55%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  TG  +          PASLTK+MT Y++F  +++ +  L+T I +S++A+  
Sbjct: 46  SAIVMDAATGEELVSVNAGASRYPASLTKMMTLYMMFEAMQQGRMTLSTRIPVSRHAAGQ 105

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            PS    K GS+++  +A+  L+ KSAND+A A+AE L  +E +F + M   +++LG+  
Sbjct: 106 EPSKLGLKPGSSISARDAILALVTKSANDVAAAVAEHLGGSEVQFGRLMTRRAQSLGMRD 165

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F NA G+      TTARDMA+LS  +   FPQ+  YF  +    +G+   + N  +  
Sbjct: 166 TSFRNASGLPDANQVTTARDMALLSRALIRHFPQHYAYFNARSFSWRGQTIRSHNRVLAE 225

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           + GADG+KTGF  ASGFN+ +SA +G   LI V+ G      R+    +L   GF 
Sbjct: 226 YDGADGLKTGFIRASGFNLASSAERGGVRLIVVVFGGATSRERDDHVMALFDRGFQ 281


>gi|188584694|ref|YP_001916239.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179349381|gb|ACB83651.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 416

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 81/350 (23%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 2   RQFLVIIAMAMLSNIF-----------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           ++ ++ +   ++ N F           P        +     L++  +G V+ +      
Sbjct: 9   KKVIITLIFLLMINTFTVSDVTAKQLYPQEFETPEIEAETAVLMEFESGKVLYDQEMHRQ 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
            +PAS TK+MTA ++          L   + +S+NA     S+        +T  + L  
Sbjct: 69  MHPASTTKIMTALLLIENA-----SLREQVVVSENAFGTDGSSMYLNLDEKITTRDLLYG 123

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L+V+SAND AVAIAE +  + + F   MN+ +K LG   T+F N HG+ +  H TTA D+
Sbjct: 124 LMVRSANDAAVAIAEYVAGSVENFADMMNSRAKELGAKNTNFKNPHGLTEENHKTTAYDL 183

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKK-------YPNTNWAVGTFLGADGMKTGFTCA 223
            +++     + P++      + + +   +         N N  +  + GA G+KTG+T +
Sbjct: 184 GVIAREALKN-PKFRSVASTRRITLDWPEEEDEDRLLVNRNELLADYPGALGVKTGYTRS 242

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFY 281
           +    VA+A +   +LIAV+L +  RN   + +  LL  GF      +    N +I    
Sbjct: 243 ANQTFVAAAERDGMTLIAVVL-STSRNRLFEDAKELLDFGFEAFEQVEIFEQNDVITSTE 301

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
            +N + E+  I EE  +     +    + +   +++      E+   + +
Sbjct: 302 VENSNQELELIVEESLSLPIPKMATEIEQRVDLEEQLLKAPIEEGEQVGS 351


>gi|241203383|ref|YP_002974479.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240857273|gb|ACS54940.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 427

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 153/323 (47%), Gaps = 8/323 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR+    +    L+   P  ++A         +LD  TG V+A    D   +PASLTK+M
Sbjct: 1   MRKLWAAVLTVTLAVSAPLAALA----GNASLILDARTGKVLAAENADTLNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  LK  K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A
Sbjct: 57  TLYLTFEALKRGKIAWDTPIKMSKYAASRPPTKLGVKAGGTITVREAVYGMIVKSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E  F + M   ++ LG+S T F+NA G+      TTARDM+ L+  +  +
Sbjct: 117 SAMGEKLAGSESGFARVMTAKARQLGMSRTVFVNASGLPDGRQVTTARDMSTLAIALMKN 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P     F       +G+     N  +  + G DG+KTG+T ASGFN+V++   G++ ++
Sbjct: 177 YPNEYRLFSTASFNFRGRTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVV 236

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTD----RKKINYIIKDFYQQNLSNEVPNISEEV 296
            V+LG     +R+   A LL       +     R   +   K+  +   + +  ++    
Sbjct: 237 GVVLGGRTARSRDAKMAGLLDRYLGRASSSGGARLVASVGAKETVEVASAADASDVPVPF 296

Query: 297 CTTQKEIINYNTQMKEAKDKESH 319
              ++        +  A D    
Sbjct: 297 NAPRQVDDLAAKSLAYADDAVVP 319


>gi|121634652|ref|YP_974897.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis FAM18]
 gi|120866358|emb|CAM10101.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis FAM18]
          Length = 389

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 142/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|154684528|ref|YP_001419689.1| DacA [Bacillus amyloliquefaciens FZB42]
 gi|154350379|gb|ABS72458.1| DacA [Bacillus amyloliquefaciens FZB42]
          Length = 443

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/363 (21%), Positives = 141/363 (38%), Gaps = 37/363 (10%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
               +S      +           +++ ++G ++     D     AS+TK+MT Y++   
Sbjct: 22  CFVPMSKAEAAGNDPIDVNASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEA 81

Query: 69  LKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +KE K            + + + +   SN   +K    T+    + + + SAN  A+A+A
Sbjct: 82  IKEGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQAMAIYSANGAAIAVA 141

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--------------TTARDM 170
           E L  TE KFV  MN  +K LG++   F NA G+V    +               +A+DM
Sbjct: 142 EILAGTETKFVAEMNAKAKELGMTNYDFKNATGLVNEDLHGKQPQGEGVKEESEVSAKDM 201

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVG----TFLGADGMKTGFT 221
           A+L+ R+ TD+P+ +    I   + +         PN N+ +      + G DG+KTG T
Sbjct: 202 ALLADRLITDYPEVLKTTSIAKTKFRAGTDDEMDMPNWNFMLKGLVSEYPGVDGLKTGST 261

Query: 222 CASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFY-NKTDRKKINYIIK 278
            ++G    ++A +    +I V+L A       R   +  +L   F  N + +       +
Sbjct: 262 DSAGSCFTSTAQRNGMRVITVVLNAKGNLHTGRFDETKKMLDYAFNSNFSMKDLYPEGSQ 321

Query: 279 -------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                  D  +           + +    K     N + +   DK+      +K T +  
Sbjct: 322 VKGHKTIDVEKGKDKQVDIVTDKALSIPVKSGDEKNYKAEVTLDKKEITAPVKKGTKVGT 381

Query: 332 KIT 334
              
Sbjct: 382 LTV 384


>gi|303247169|ref|ZP_07333443.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           fructosovorans JJ]
 gi|302491328|gb|EFL51216.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           fructosovorans JJ]
          Length = 366

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 10/345 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE----TNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+ + ++ +  L                  +    + D  TG +     PD    PAS+
Sbjct: 1   MRRIMFLLIVLCLIGPKTAFPAKHHSSGKLAVKAALVADYGTGKIFYSQDPDRRIAPASV 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT Y+VF  +   +A  +  + +S+ A     S    + G T+TLD  ++ + V S 
Sbjct: 61  TKVMTMYLVFDMVASGQASFSDKVKVSRRADATGGSTMNLRAGETVTLDELMRGMAVASG 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND AVA+AE        +V+ MN  ++ LG++ T F   +G+   G  TTARD+  L+  
Sbjct: 121 NDAAVAVAEHFGGV-PAWVKRMNAKARQLGMTRTTFKTPNGLPAPGQLTTARDLMKLAVS 179

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               +PQ + Y     +   G  + NTN  +G   G DG+KTGF  ASGFNI+A+A +G 
Sbjct: 180 YLRHYPQALRYHSTTTINHCGAVHANTNRLLGVCEGMDGIKTGFVNASGFNIIATAKRGK 239

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
             +IAV+LG      RN+ +  +L   F    D       +          +  +  +++
Sbjct: 240 TRIIAVVLGGRSSQVRNRETERILDASFEGSVDSMLAKADVAPAKSSVKRAKSHHRGKKI 299

Query: 297 -CTTQKEIINYNTQMKEAKDKESHFIDFE----KITLLKNKITKK 336
                      + +   +   + H    +    K   +K   +KK
Sbjct: 300 RVADSGRHEKISAKRGASARIDGHKASVKSSRHKAAKVKKAPSKK 344


>gi|325132290|gb|EGC54983.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           M6190]
          Length = 389

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 141/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    +   T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPSDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|225181453|ref|ZP_03734896.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167851|gb|EEG76659.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 406

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 77/336 (22%), Positives = 133/336 (39%), Gaps = 11/336 (3%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +F VII + +L             +     L+++ TG V+ E        PAS+TK++T 
Sbjct: 5   KFRVIITVVVLLFYTGTAMAEPVVQSTAAILINSRTGEVLWEKNSHQQMFPASITKILTT 64

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            ++     E           S+ A +   S+   ++G  +T+++ L  L+++SAND +V 
Sbjct: 65  ILLLENAAE-----DEVAVASELAEKTRGSSLYLRRGQELTVEDLLYALMLRSANDGSVV 119

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
            AE +  +   F Q MN  ++  G   + F N HG+    H TTA DMA+++     +  
Sbjct: 120 AAELVSGSVDSFAQLMNQKARQAGAINSTFTNPHGLPDENHLTTAYDMAMITRYAMQNQR 179

Query: 183 QY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                      I   E +     N    + T+ G  G+KTG+T  +G   V +A +    
Sbjct: 180 FRDLAATQRHTIVWPEGEDSYLINRIPLLSTYEGMLGIKTGYTTPAGRTFVGAAQRDGLE 239

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           LI V+L A   N     + +LL  GF N T  + +         +    +  ++      
Sbjct: 240 LITVVLQA-SGNELWDDTVALLDYGFDNFTMVQPVVQGDIMHTTEVRFGDAVSLQAADSF 298

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                +N      E K  E       K   +   + 
Sbjct: 299 ELTRPVNNKEVDMEIKVAE-VQAPVNKGDHIGEVVI 333


>gi|229079541|ref|ZP_04212079.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-2]
 gi|228703766|gb|EEL56214.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock4-2]
          Length = 416

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETDPAIDVEAGSAILIEENSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EQIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLEEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFEVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            +K   +   I 
Sbjct: 301 HETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNREQEAPIKKGVTISKMII 360


>gi|158423216|ref|YP_001524508.1| putative D-alanyl-D-alanine carboxypeptidase precursor
           [Azorhizobium caulinodans ORS 571]
 gi|158330105|dbj|BAF87590.1| putative D-alanyl-D-alanine carboxypeptidase precursor
           [Azorhizobium caulinodans ORS 571]
          Length = 629

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 85/231 (36%), Positives = 137/231 (59%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D NTG V+ E   D   +PASLTK+MT Y++F  L+  +  L + + +S +A+  
Sbjct: 123 AAIVVDGNTGKVLYEENADSLRHPASLTKIMTLYMLFEQLQAGRLKLDSDLPVSAHAASQ 182

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + GST+ +++A+K ++ +SAND AV I E++  TE  F + M   ++ LG+S 
Sbjct: 183 SPTKLNLRPGSTIEVEDAIKAVVTRSANDAAVVIGEAIGGTESNFAEMMTRKARALGMSN 242

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F NA G+   G  TTARD+++L   I+  FP+   YF  +    +G+   N N  +  
Sbjct: 243 TTFRNASGLPNPGQVTTARDLSVLGRAIQDRFPREYRYFSTRAFVYRGETIGNHNRLMLR 302

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
             G DG+KTG+T ASGFN+V S  + D+ L+ V+LG    ++R++  AS+L
Sbjct: 303 MEGVDGIKTGYTNASGFNLVTSLHRDDRFLVGVVLGGSSASSRDQRMASIL 353


>gi|159185157|ref|NP_355279.2| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           [Agrobacterium tumefaciens str. C58]
 gi|159140428|gb|AAK88064.2| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           [Agrobacterium tumefaciens str. C58]
          Length = 431

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 86/257 (33%), Positives = 135/257 (52%), Gaps = 1/257 (0%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A+     I    +         + ++D NTG V+A    D   +PASLTK+MT Y+ F
Sbjct: 14  VFALTFFCAILSLQASPAQ-AGYAHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTF 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L   +      IT+SKN +   PS    ++G T T+  A+  +IVKSAND+A  + + 
Sbjct: 73  EALHAGRLRWDQKITMSKNGASVIPSKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDH 132

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L  +E +F + M   ++ LG+S T F NA G+      TTARDMA L   ++ DFP+   
Sbjct: 133 LGGSEARFAEMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYG 192

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            F ++    +GK+    N  +  + G DG+KTG+T ASGFN+V++     + ++ V+LG 
Sbjct: 193 LFAMESFSFRGKRIRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGG 252

Query: 247 LDRNTRNKVSASLLSMG 263
               +R+   A+LL   
Sbjct: 253 KTARSRDAQMAALLDKA 269


>gi|90417678|ref|ZP_01225590.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337350|gb|EAS51001.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 364

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 126/316 (39%), Gaps = 8/316 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D  TG V+     D P+ PASL K+MT  +VF+ +K+    L T   +S+
Sbjct: 5   ETTAREALLVDGETGTVLFAKNADAPFPPASLAKMMTMEIVFAAIKDGTLTLDTEFPVSE 64

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +A          S    +  S + +   ++  I++SAND A+ IAE +  +E  F + MN
Sbjct: 65  HAWRTGGAPSRTSTMFAELKSQVPVSALIRGAIIQSANDAAIVIAEGMEGSEAAFAERMN 124

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG+  + F N  G+     Y TARD+  L+  +++ +P+    +     E     
Sbjct: 125 ARARELGMINSRFANPTGLPADDQYVTARDLITLARHLRSTYPELYAIYAEPAFEWNKIF 184

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +   +GADG++TG+T ASGF++V +   G +  +  + G      R   +  L
Sbjct: 185 QRNRNPLLSMEIGADGIETGYTEASGFSLVGATSHGGRDTLLAVSGLETAGDRASEARKL 244

Query: 260 LSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           L     +                      S  V   + E                + +  
Sbjct: 245 LLWARESFESETLFPAGQIVGSANVFGGESGSVALAATEAVEALVPADAPELVSLQIRYL 304

Query: 317 ESHFIDFEKITLLKNK 332
           E       +   + + 
Sbjct: 305 EPLIAPIAEGQTVASL 320


>gi|209551182|ref|YP_002283099.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209536938|gb|ACI56873.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 377

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 114/297 (38%), Positives = 175/297 (58%), Gaps = 2/297 (0%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           FL+         + L+D  TG V+        W PASLTKLMT Y VF  ++  +  L T
Sbjct: 25  FLASVPLAAANPHILVDVQTGRVLEHEEAFRKWYPASLTKLMTVYTVFDAIRAGQISLDT 84

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+ +SK A+  P +   FK G  +TLD+ALK+L+VKSANDIAVA+AE++  T++ FV  M
Sbjct: 85  PVVMSKRAAAQPAAKMYFKPGQKLTLDSALKILMVKSANDIAVAVAEAIGGTQEGFVTRM 144

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++ DFPQY  YF ++G     +
Sbjct: 145 NGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRDFPQYASYFALEGFTNGQQ 204

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             P+ N  +G F GADGMKTGF CASGFN + SA +  +++++V+LG      R   +A+
Sbjct: 205 NVPSLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRTIVSVVLGTDSLAARADATAN 264

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           LL  GF  +    +    ++ + Q     +V +IS ++C+ +   I   T+ +  + 
Sbjct: 265 LLQKGFTTQFPGNETLGSLRPYGQGQD--QVTDISADICSAKGAKIRSETRDEVGRM 319


>gi|153009349|ref|YP_001370564.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
 gi|151561237|gb|ABS14735.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
          Length = 469

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 7/318 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + +A+++      +              ++D NTG  +  +  D    PASLTK+MT Y+
Sbjct: 20  LLLAVVTGCSTASTTIPAIAASDRYAAIVIDANTGKTLFASNADAQRYPASLTKMMTLYM 79

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  ++  +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+ 
Sbjct: 80  LFEAMQAGRMNKDTRIPVSAYAAARPPTKIGFRSGQSIRAEDAALAMITKSANDVATAVG 139

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E++F Q M   ++ LG+  T F NA G+     +TTARDMAILS  ++  FP  
Sbjct: 140 EYIGGSEERFAQMMTAKARRLGMRNTTFRNASGLPNMAQHTTARDMAILSIALRQHFPNE 199

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +    +G+     N  +G   G DG+KTG+T ASG+N+ +S     + L+AV++
Sbjct: 200 FSYFSRRSFVFRGQTINGHNRLLGRVEGVDGIKTGYTNASGYNLASSVSLDGRRLVAVVM 259

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G     +R+     L+             +                  S ++   +   +
Sbjct: 260 GGNTGASRDAHMTQLI----RKYLPMATRSRNAAPLVAMRNDAPQVVASIDLPKAKNAPV 315

Query: 305 NYNTQMKEAKDKESHFID 322
               Q+    D  ++   
Sbjct: 316 PVTRQVAAVDDIINNESG 333


>gi|303327144|ref|ZP_07357586.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio sp.
           3_1_syn3]
 gi|302863132|gb|EFL86064.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio sp.
           3_1_syn3]
          Length = 256

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 128/246 (52%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L++ NTG V+ E   D    PASLTKLM+ ++    +K  +  L   + +S+ A+ 
Sbjct: 4   RSAILVNLNTGRVLYEQSADTAIPPASLTKLMSMFLTLDAVKAGRISLNRKVKVSRQAAA 63

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S+   + G  + L   L  + V S ND A+ +A+ +    + FV+ MN  ++ LG+ 
Sbjct: 64  TGGSSMHLRAGERVPLVRLLTGMAVASGNDAAMTVAQHVHGNSRTFVRQMNRKARALGMR 123

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T F N  G+   G  TTARDM  LS       P  M +   +    +G+   NTN  +G
Sbjct: 124 RTLFKNPTGLPAAGQKTTARDMMTLSRAYLKAHPDAMRFHGTRFFLHRGRTMRNTNALLG 183

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           +  G +G+KTG+T ASG+NIV +A +G   L+AV+LG   ++ R+  +  L+  GF + +
Sbjct: 184 SVAGVNGLKTGWTVASGYNIVITAQRGKTRLLAVVLGGNSKDRRDISARRLIEAGFRHPS 243

Query: 269 DRKKIN 274
             K++ 
Sbjct: 244 SPKQVQ 249


>gi|169351113|ref|ZP_02868051.1| hypothetical protein CLOSPI_01892 [Clostridium spiroforme DSM 1552]
 gi|169292175|gb|EDS74308.1| hypothetical protein CLOSPI_01892 [Clostridium spiroforme DSM 1552]
          Length = 380

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 8/316 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 L+D ++  ++ +   D    PAS TK+MT  ++F  +  KK      +T SK A
Sbjct: 30  NASGAILIDADSKQILYDKNADKKLFPASTTKIMTMIIMFEAINNKKISFDDQVTTSKYA 89

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    ++G  M+L++  K + + SAND +VA++E +  +  KFV+ MN  +K L 
Sbjct: 90  ASMGGSQVYLEEGENMSLEDMFKSIAIASANDASVAVSEYIAGSTNKFVEMMNQKAKELN 149

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------FPQYMHYFQIKGLEIKGKKY 200
           L  THF N  G+  + HYT   D+A+++  +             ++   I+    +    
Sbjct: 150 LKNTHFENVTGLHDNNHYTCPYDLAMMASYLIKIGGNKLLSVTSLYDSYIREDTKQSFWL 209

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  +  + G DG+KTG+T  +G+ +V +A +  Q L+ V++   +   RN+   +LL
Sbjct: 210 VNTNKLLKLYDGVDGLKTGYTKEAGYCLVTTAKRDGQRLVGVVMKESEPKKRNEEMCNLL 269

Query: 261 SMGFYNKTDRKKINY--IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
             G  N           II+      + N   N+  +      +    + +       + 
Sbjct: 270 DYGLNNYKREIIYKKDSIIEKHVVDKMDNLTINVVCKEDIAYIKAKANDQKYTTKIVYKD 329

Query: 319 HFIDFEKITLLKNKIT 334
           + +  +K  ++     
Sbjct: 330 NLLPVKKGDIVATLTV 345


>gi|297617197|ref|YP_003702356.1| serine-type D-Ala-D-Ala carboxypeptidase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145034|gb|ADI01791.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 401

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 78/341 (22%), Positives = 136/341 (39%), Gaps = 19/341 (5%)

Query: 4   FLVIIAMAMLSNIFPFLS-IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            ++ +  A+L  + P  +  A       Y L+D  TG V+       P   AS TK+MTA
Sbjct: 33  LVLALTFALLFILSPGKAEAAPYVTSQAYCLVDLTTGQVLGGKNVMQPRPVASTTKVMTA 92

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +   +       L     +S  A+         +    MT+++ LK  +++SAND +V 
Sbjct: 93  ILALEYA-----GLKEVAVVSPKAARTESG-MGLRPQDKMTIEDLLKAALLESANDASVV 146

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +E  F   MN  +  +G   THF NA G+    H +T  D+A+++     +  
Sbjct: 147 LAEHVAGSEDMFAYLMNKKAWAIGAYHTHFENASGLPDKEHLSTCYDLAVITRYALRNQV 206

Query: 183 QY-----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                        +     G+K  NTN  +G++ GA G+KTG T A+G  ++ +A +G++
Sbjct: 207 FEKLVATRQAVIKQPGYPGGRKIYNTNKLLGSYEGAFGVKTGTTDAAGKCLIGAAQRGNR 266

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISE 294
            L+AV+L +     R      LL  GF + T  K ++           +    EV    +
Sbjct: 267 KLVAVVLRS---WDRYADCQRLLDWGFTSFTREKVVDKSNMFKVLRVNKGTRIEVTVYPD 323

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                         + K            +    +     +
Sbjct: 324 RDVYLWLSQDKMGLE-KVVDVDYQPTAPLKTGQKIGELEIR 363


>gi|325292859|ref|YP_004278723.1| D-alanyl-D-alanine carboxypeptidase [Agrobacterium sp. H13-3]
 gi|325060712|gb|ADY64403.1| D-alanyl-D-alanine carboxypeptidase [Agrobacterium sp. H13-3]
          Length = 480

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/255 (32%), Positives = 134/255 (52%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            V + +A        +  A+ +      ++D  TG V+    PD    PASLTK+MT Y+
Sbjct: 4   FVALTLAAAFITATSVGTAQADPKYAGIVIDAKTGKVLYGEDPDGLRYPASLTKMMTLYL 63

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            F  L   +  L + + +S NA++ PPS    + G ++T++ A+  L+ +SAND+A A+ 
Sbjct: 64  TFEALNSGRISLDSKVPVSANAAKEPPSKLGVRAGGSITVEQAILALVTRSANDMATALG 123

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E +F + M   ++ LG++ T + NA+G+      TTARD A L   ++  FPQY
Sbjct: 124 EYIGGSEDRFARMMTAKARALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQY 183

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +      +   N N  VGT  G DG+KTG+T A+G N+  SA    +S++AV+L
Sbjct: 184 YGYFSTRTFNFGKQVIGNHNRLVGTVRGVDGIKTGYTRAAGSNLATSAQLDGRSIVAVVL 243

Query: 245 GALDRNTRNKVSASL 259
           G      R+     L
Sbjct: 244 GGRSSAARDATMRKL 258


>gi|83308700|emb|CAJ01610.1| conserved hypothetical protein [Methylocapsa acidiphila]
          Length = 540

 Score =  174 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 103/254 (40%), Positives = 154/254 (60%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M++ +    + +   +     +++  +G V+ E++   PW PASLTKLMT YV    ++E
Sbjct: 1   MVAALCAGTTASAPAQAAPAIVVEYPSGAVLYEDHATQPWYPASLTKLMTVYVALKAVRE 60

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L TP+ +S  A+  PPS   F+ G+ +TL NA+K+L+VKSAND+AV IAE +  + 
Sbjct: 61  HRLTLDTPLAVSARAASMPPSKMGFRPGTLVTLGNAMKMLMVKSANDLAVTIAEGISGSV 120

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + F   MN  + +LGL  +HF+N +G+    H ++ARD A+L+  + + FP+    F I 
Sbjct: 121 EAFADEMNEAAASLGLRQSHFVNPNGLPNPQHISSARDFAVLAIALYSTFPEQADLFSIG 180

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
            L + G    N N  +G + G DGMKTGFTCA+GFN+VASA QG + LIAVILGA +   
Sbjct: 181 ALRLGGDIITNHNNLLGRYPGVDGMKTGFTCAAGFNVVASATQGGRKLIAVILGAPNVAQ 240

Query: 252 RNKVSASLLSMGFY 265
           R   +A+L   GF 
Sbjct: 241 RTIKAAALFDRGFS 254


>gi|291557282|emb|CBL34399.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum V10Sc8a]
          Length = 409

 Score =  174 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 15/339 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKL----PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
             +A+ M        S  +  +         + + +TG V+ E+        AS+TKLM 
Sbjct: 34  FTLAVVMQGASLTAFSEGDVIEADSITKAAIVTEVSTGQVLYEHNSHERLPMASVTKLMC 93

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +    +++    + T IT +  A+    S      G  M+  + ++ +++ SAND  V
Sbjct: 94  LLIWAEEMEKGTFGMDTVITATARANAMDGSVIWLNVGEEMSAYDMIRSVVIASANDACV 153

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+ E +  TE+ FV+ MN  ++ LG+S TH+ N  G     HYT+A D AILS    +++
Sbjct: 154 AVCEYIAGTEEMFVERMNKRAQELGMSDTHYDNCVGFDSDTHYTSAYDTAILSA-AVSEY 212

Query: 182 PQYMHYFQIKGLEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y  +F  +   +    +  +  NTN  +  + G  G KTG T  +G  +   A +G+ 
Sbjct: 213 DCYNEFFATRLDYVREGERQTQLLNTNKLMQRYDGIIGGKTGTTDKAGCCLAVWAKRGNM 272

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFYQQNLSNEVPN 291
            L AV LG  +   R      LL+ GF      +       +  +      +  +     
Sbjct: 273 KLCAVALGCKESEQRFTACTDLLNYGFSGFELYRTAVDSDVLTPVTVTEGLEKQAEVRVK 332

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   +                 +     EK+  ++
Sbjct: 333 RLNTIVIPKGSSKRIEYTHTVVDSLSAPVQYGEKVGEVR 371


>gi|228921188|ref|ZP_04084518.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228838504|gb|EEM83815.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 416

 Score =  174 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 128/360 (35%), Gaps = 34/360 (9%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +  +         A   +     L++ N+G ++ E   D     AS+TK+M+ Y+V   
Sbjct: 1   MVVTIGKAAAETVPAIDVEAGSAILIEANSGKILYEKNADESLAIASMTKMMSEYLVHEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIA 124
           + + K      + IS+ A +     S          + T+    + + + SAN   +A+ 
Sbjct: 61  VDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKELYEAMAIYSANGATIALV 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDM 170
           E +   E  FV+ MN+ SK  G+    F+N+ G+                  +  +ARD 
Sbjct: 121 EEIAGKEVNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGYHLEGTTLDEKNKMSARDC 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL+ R+  DFPQ ++  +I     +          N NW     +  + G DG+KTG T
Sbjct: 181 AILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWMLKGLIKQYEGVDGLKTGTT 240

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G     +  +    LI+V++ A     R   +  L   GF N   +           
Sbjct: 241 PEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYGFANFKVKNVYGKDSVIKG 300

Query: 282 -------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                       + V    + V     +      + +            ++   +   I 
Sbjct: 301 HETVRVANAKDKDVVVQTKQAVSLPMPKGNKDIYKKEFKVSNMEQEAPIQEGVTISKVII 360


>gi|304321612|ref|YP_003855255.1| D-alanyl-D-alanine carboxypeptidase [Parvularcula bermudensis
           HTCC2503]
 gi|303300514|gb|ADM10113.1| D-alanyl-D-alanine carboxypeptidase [Parvularcula bermudensis
           HTCC2503]
          Length = 423

 Score =  174 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 96/280 (34%), Positives = 150/280 (53%), Gaps = 4/280 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +  L+ I  A + +     +  +        ++  +TG V+ + Y   P  PASLTK+MT
Sbjct: 9   KSLLITIIFATVLSPLAAHANPK----YAAYIIHADTGDVLFDRYSTEPRYPASLTKMMT 64

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y++F  ++E +   TT + +SK AS  P S    K G+T+ +D A++ L++KSAND+A 
Sbjct: 65  LYLLFEAIEEGRVSRTTDMKVSKRASLQPASKLGVKSGTTIDVDTAIRALVIKSANDVAT 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
             AE L  +E KF + M   +++LG+  T F NA G+      TTARDMAILS R+  DF
Sbjct: 125 VTAEHLAGSEAKFARLMTQKARDLGMRQTVFRNASGLPDDRQVTTARDMAILSQRLVQDF 184

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P + HYF     +  G+ Y + N       GADG+KTG+T ASG+N+  +  +GD  LI 
Sbjct: 185 PDFFHYFDDDSFQWGGRTYKSHNKVTQDLKGADGLKTGYTRASGYNLATTVRRGDHRLIG 244

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
           ++LG     TRN     +++  + + + R  +   I    
Sbjct: 245 IVLGGRSGRTRNAHMIEIMNKAYADISARPSLVKSILHVK 284


>gi|46201033|ref|ZP_00055930.2| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 419

 Score =  174 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 85/245 (34%), Positives = 128/245 (52%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  TG V+    PD    PASLTK+MT +++F  L   +  + +  T
Sbjct: 14  QPAQAGRYASIVIDAQTGSVLHAANPDARSYPASLTKVMTLFLLFDELDSGRIRMDSKFT 73

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S +A+   PS    + G T++++N +  L+ KSAND AV  AE +  TE KF Q M   
Sbjct: 74  ASAHAAAQSPSKLGLEPGETISVENLILALVTKSANDAAVVAAEGVGGTESKFAQMMTRK 133

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LG+  T + NA G+   G  +T RD AIL+  +    P Y  YF  +    +G+   
Sbjct: 134 AQALGMRNTVYRNASGLPDTGQVSTVRDQAILARALIRSHPGYYKYFSTRQFVYEGQPIN 193

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             N  +  + GADG+KTG+  ASGFN+++SA +GDQ +I V+ G     +R+   A LL 
Sbjct: 194 THNRLMLRYQGADGIKTGYIHASGFNLISSAKRGDQRIIGVVFGGATATSRDNHMAQLLD 253

Query: 262 MGFYN 266
            GF  
Sbjct: 254 KGFAK 258


>gi|325130023|gb|EGC52816.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           OX99.30304]
          Length = 389

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 11/328 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +  +  P L   ET     + ++D  +  +++    + P  PA+LT+LMTAY+VF  +K 
Sbjct: 30  LTVHAAPTLQTPETLTA-AHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKS 88

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKT 130
                   + I ++A     S    + G T++ D  LK +I  SAND A+ +A      +
Sbjct: 89  GNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGS 148

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
            + FVQ MN  ++ LG+  T F N  G+ + G  +TA+D+A LS  +  DFP+Y   F I
Sbjct: 149 IENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSI 208

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K  + K  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    
Sbjct: 209 KSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAE 268

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEII 304
           TR   ++ LL+         K           Q        +         +    KE  
Sbjct: 269 TRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAK 328

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++     +      +K  +L   
Sbjct: 329 MAEQILET---IQPIPAPVKKGQILGKI 353


>gi|218767989|ref|YP_002342501.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis Z2491]
 gi|121051997|emb|CAM08306.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis Z2491]
 gi|319410238|emb|CBY90578.1| D-alanyl-D-alanine carboxypeptidase (DD-peptidase;
           DD-carboxypeptidase; CPase; PBP5) [Neisseria
           meningitidis WUE 2594]
          Length = 389

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 139/352 (39%), Gaps = 25/352 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENYP 47
           + L ++   +L       +                        + ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNRPTAHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|283850365|ref|ZP_06367654.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio sp.
           FW1012B]
 gi|283574391|gb|EFC22362.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio sp.
           FW1012B]
          Length = 365

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 84/267 (31%), Positives = 136/267 (50%), Gaps = 3/267 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR+ + ++ +  L       S  ++    +    + +  +G V+    PD    PAS+TK
Sbjct: 1   MRRVIFLLMILCLVGPKTAFSARQSGKLPVKAAMVAEYGSGRVLFTQDPDKRIAPASVTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT Y+VF  L   +A L+  + +S+ A     S    + G  +TLD  ++ + V S ND
Sbjct: 61  VMTMYLVFDALAAGRASLSDKVKVSRRADATGGSTMNLRAGEVVTLDELMRGMAVASGND 120

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            AVAIAE        +V  MN  ++ LG+++T F   +G+   G  TTARD+  L+    
Sbjct: 121 AAVAIAEHFGGV-PHWVGMMNEKARELGMTSTTFKTPNGLPAPGQLTTARDLMKLATSYL 179

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             +PQ + Y     +   G  + NTN  +G   G DG+KTG+  +SG+NI+A+A +GD  
Sbjct: 180 RRYPQALRYHSTTEINHCGAVHGNTNRLLGVCEGVDGIKTGYVGSSGYNIIATAKRGDTR 239

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFY 265
           +IAV+LG   +  RN  +  +L   F 
Sbjct: 240 IIAVVLGGRTKQARNNATTRILDASFS 266


>gi|328909969|gb|AEB61565.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus amyloliquefaciens LL3]
          Length = 418

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 75/359 (20%), Positives = 140/359 (38%), Gaps = 37/359 (10%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S      +           +++ ++G ++     D     AS+TK+MT Y++   +KE 
Sbjct: 1   MSKAEAAGNDPIDVNASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIKEG 60

Query: 73  KAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           K            + + + +   SN   +K    T+    + + + SAN  A+A+AE L 
Sbjct: 61  KVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQAMAIYSANGAAIAVAEILA 120

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--------------TTARDMAILS 174
            TE KFV  MN  +K LG++   F N+ G+V    +               +A+DMA+L+
Sbjct: 121 GTETKFVAKMNAKAKELGMTNYDFKNSTGLVNEDLHGKQPQGEGVKEESEVSAKDMALLA 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVG----TFLGADGMKTGFTCASG 225
            R+ TD+P+ +    I   + +         PN N+ +      + G DG+KTG T ++G
Sbjct: 181 DRLITDYPEVLKTTSIAKTKFRAGTDDEMDMPNWNFMLKGLVSEYPGVDGLKTGSTDSAG 240

Query: 226 FNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFY-NKTDRKKINYIIKDFY- 281
               ++A +    +I V+L A       R   +  +L   F  N + +       +    
Sbjct: 241 SCFTSTAQRNGMRVITVVLNAKGNLHTGRFDETKKMLDYAFNSNFSMKDLYPEGSQVKGH 300

Query: 282 ------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                 +           + +    K     N + +   DK+      +K T +     
Sbjct: 301 KTIDVDKGKDKQVDIVTDKALSIPVKSGDEKNYKAEVTLDKKEITAPVKKGTKVGTLTV 359


>gi|307943474|ref|ZP_07658818.1| penicillin-binding protein [Roseibium sp. TrichSKD4]
 gi|307773104|gb|EFO32321.1| penicillin-binding protein [Roseibium sp. TrichSKD4]
          Length = 446

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 93/260 (35%), Positives = 151/260 (58%), Gaps = 1/260 (0%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  ++      FLS     ++  + L+D  +G V+ E      W PASLTK+MTAYV   
Sbjct: 1   MFASLFGLFCFFLSSPTKAEIGAHILIDAKSGDVLYERQSTRKWYPASLTKIMTAYVTLK 60

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +++++  +T+P+  SKN+   PPS   FK G+ +T+D ALK++++KSAND+AVA+ E++
Sbjct: 61  AVRDERITMTSPVVQSKNSISEPPSKMGFKVGTQLTVDAALKIIMIKSANDVAVALGEAV 120

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  F+  MN  +K LG+  T F+N HG+  +   +TARDMA+L+     DFP+    
Sbjct: 121 SGSEAAFIAEMNREAKRLGMRNTRFVNPHGLPDNAQVSTARDMALLARAFWYDFPEARQI 180

Query: 188 FQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++  G++   K   + N        GA+GMKTG+ C SG+N+ A+  +  ++LIAV+LGA
Sbjct: 181 YKYPGIKFGRKPLRSANRFFLQRVPGANGMKTGYICNSGYNVAATVTRRGRTLIAVVLGA 240

Query: 247 LDRNTRNKVSASLLSMGFYN 266
                R  ++  L+  GF  
Sbjct: 241 RSGLERTALTRELMDKGFKK 260


>gi|219669686|ref|YP_002460121.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
 gi|219539946|gb|ACL21685.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
          Length = 379

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 76/345 (22%), Positives = 132/345 (38%), Gaps = 31/345 (8%)

Query: 6   VIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           V + +++  +  P  +             +         L+D  TG ++ +        P
Sbjct: 11  VCVLISLSLSAAPVYAQTTDTNQGLIPTSSLAITADAAVLMDGATGDILYDKNAHKQRPP 70

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK++TA +     K         + +S+ A+    S      G  + L   +   +V
Sbjct: 71  ASTTKILTAILGLELGK-----PDELVVVSEKAAAVGESTIHLDPGEKILLYELVTGAMV 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           KS ND  VAIAE +  TE+ FV+ MN  +  LG   THF N +G+    H +TA D+A++
Sbjct: 126 KSGNDACVAIAEQIAGTEEDFVRLMNQKAFLLGAKNTHFENTNGLPSKNHVSTAYDLALM 185

Query: 174 SWR----IKTDFPQYMHYFQIKGLEIK-GKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +              +   +I  +E        NTN  +  +   DG+KTG T A+G  +
Sbjct: 186 ARYGLQIPAFTSITRLKETEIHFIEPDFFMNLRNTNKLLWNYPYTDGVKTGTTTAAGKCL 245

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNL 285
           VA+A +  + LIAV+L A D   R   +  LL  GF        +               
Sbjct: 246 VAAATKDGRQLIAVVLHAPD---RFGDAQKLLEWGFNETETLNYVQAGETIEFPAENSEP 302

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    ++   + +      ++   ++     +  +    L 
Sbjct: 303 IKAFAQNPIQISILKTDKEKLEKKIVWTRE---PGLPIKAGDSLG 344


>gi|329851344|ref|ZP_08266101.1| D-alanyl-D-alanine carboxypeptidase family protein [Asticcacaulis
           biprosthecum C19]
 gi|328840190|gb|EGF89762.1| D-alanyl-D-alanine carboxypeptidase family protein [Asticcacaulis
           biprosthecum C19]
          Length = 457

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 140/261 (53%), Gaps = 4/261 (1%)

Query: 13  LSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +  + P  + A+           ++D  TG V      D    PASLTK+MT Y+ F  L
Sbjct: 1   MILVSPLKARAQDLSGDARYSAIVVDAVTGEVFYSAKADSARYPASLTKIMTLYMAFDAL 60

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                     I +S+NA+   P     K G T+ +D+A++L+ + SAND+AVA+AE +  
Sbjct: 61  AMGTLKPDDTIVMSRNAAGQSPVKVYLKAGETIDVDSAMRLVALYSANDLAVALAEKIGG 120

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           TE++F   M   ++ LG+  T F+NA G+      ++ARDMAIL+  +  D+PQY  YF 
Sbjct: 121 TEERFAALMTIKAQELGMGQTRFVNASGLPDPRQLSSARDMAILARAVMRDYPQYYDYFS 180

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           +     +G+ Y N N       G DGMKTGFT A+G+N+VAS ++    LIAV+LG  ++
Sbjct: 181 LPNYTFRGRTYVNHNPL-RNMPGVDGMKTGFTNAAGYNLVASQVKDGHRLIAVMLGGNNK 239

Query: 250 NTRNKVSASLLSMGFYNKTDR 270
           + R +    L++ GF     R
Sbjct: 240 SQRREHVTFLMNTGFDIFDRR 260


>gi|261409755|ref|YP_003245996.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. Y412MC10]
 gi|261286218|gb|ACX68189.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. Y412MC10]
          Length = 336

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 19/278 (6%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + +++     + I    K     L+  +TG V+   + D P  PAS++K+MT  +V  
Sbjct: 46  FGVILIAVFIARVFIPPPIKASSAILIHADTGRVLYAMHADLPLPPASMSKMMTELLVLD 105

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            ++  +      + +S+ A+E P S     +G   TL    + LI+ SAND AVAIAE L
Sbjct: 106 AVRSGQHAWDENVPVSRYAAEVPGSAIGMHEGERYTLKQLFEALIIHSANDAAVAIAEHL 165

Query: 128 CKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQH------------GHYTTARDMAILS 174
             +E +FV+ MN  +K +GLS  T F NA G+                   TARD A+L+
Sbjct: 166 GGSEARFVETMNARAKEIGLSDRTVFANASGLPAADLVPFAEAASEGDTVMTARDSAMLA 225

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKK--YPNTNWA----VGTFLGADGMKTGFTCASGFNI 228
             +    P  +     + L +  K+     TN         + G DG KTG+T ++G+  
Sbjct: 226 RWLVNKHPDLLEVTSQRDLPVPQKELSLHTTNLMLPGEPHAYQGNDGFKTGYTASAGYCF 285

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             +A +G   LI+V++G  D + R   +  L+  GF  
Sbjct: 286 TGTASRGGNRLISVVMGTGDADQRFTETRKLMDYGFDR 323


>gi|226312616|ref|YP_002772510.1| peptidase S11 family protein precursor [Brevibacillus brevis NBRC
           100599]
 gi|226095564|dbj|BAH44006.1| peptidase S11 family protein precursor [Brevibacillus brevis NBRC
           100599]
          Length = 406

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 90/337 (26%), Positives = 140/337 (41%), Gaps = 24/337 (7%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKL--------PYYTLLDTNTGHVIAENYPDHP 50
           MR  L  +++ + +L N+    + AE +              L+D  TG V+ E  P   
Sbjct: 1   MRFLLTNLLVVVMVLFNLGMPSAFAEESSSLEPNTLIGQSAILIDATTGQVLFEKNPHEK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS+TK+ T              L   +T+SK A     +    ++G  +TL N L  
Sbjct: 61  LYPASITKIATGIYAIEK-----GNLDDTVTVSKKARREEGTRVYLEEGEKITLRNLLYG 115

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN-LGLSATHFMNAHGVVQHGHYTTARD 169
           L++ S ND   AIAE + +T ++F   +N   K  +G++ T+F N HG+    HYTTA D
Sbjct: 116 LLMNSGNDAGTAIAEHMSQTTERFAVDLNAYLKEKVGVTETNFANPHGLHDPNHYTTAAD 175

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLGADGMKTGFTCASG 225
           MA +S       P +      K L   G+ +     N N  +  + GA G+K GFT  + 
Sbjct: 176 MAKISRY-AMKNPVFREIVGTKRLPWHGQTWETVLVNHNKLLREYEGATGIKNGFTDQAM 234

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQ 282
             +V SA +G+  LIAV + A       K    LL  GF     +          +    
Sbjct: 235 HTLVGSAKRGETELIAVTMKASTSANAYKDIKKLLDFGFQGFETKFIAKKGDSFSEVAVP 294

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            N S       E++  T  + +    ++K       H
Sbjct: 295 GNTSVVTFTAKEDLYATVPKGVEPLVELKTDGSLSVH 331


>gi|220920397|ref|YP_002495698.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Methylobacterium nodulans ORS 2060]
 gi|219945003|gb|ACL55395.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Methylobacterium nodulans ORS 2060]
          Length = 498

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 90/303 (29%), Positives = 155/303 (51%), Gaps = 3/303 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  +G ++     D   +PAS+TK+MT Y++F  L+  +  L TP+ IS NA+  
Sbjct: 49  AAMVVDVKSGRILHAVNEDALRHPASITKVMTLYLLFEQLERGRMSLDTPLEISANAARQ 108

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            PS    + G+T+T++ A+K L+ KSAND+A AI E++  +E  F + M   +  LG++ 
Sbjct: 109 APSKLGLRPGATITVEEAIKALVTKSANDVACAIGENIAGSEGAFAEMMTRKAHALGMTR 168

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           TH+ NA G+      TTARD+ IL+  I+  FP+Y  YFQ +    +G+   N N  +G 
Sbjct: 169 THYANASGLPDSDQITTARDLTILARAIQDRFPRYYRYFQTRSFAFRGRVIGNHNHLLGR 228

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+T  SGFN++ SA   D+ ++AV+LG     +R+ +   L+     N   
Sbjct: 229 VEGVDGIKTGYTRDSGFNLMTSARINDRHIVAVVLGGKSVASRDAIMTRLVE---ANLPK 285

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                       +         ++E+   T+  +   + + +  +   S     + + L 
Sbjct: 286 AYAGARTTAPVVEVAERPRPAVVAEKPVATRTLVAAADGEDESIETTASTGRPGQPLDLN 345

Query: 330 KNK 332
            ++
Sbjct: 346 PSR 348


>gi|121602162|ref|YP_988381.1| D-alanyl-D-alanine carboxypeptidase family protein [Bartonella
           bacilliformis KC583]
 gi|120614339|gb|ABM44940.1| D-alanyl-D-alanine carboxypeptidase family protein [Bartonella
           bacilliformis KC583]
          Length = 362

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 118/326 (36%), Positives = 189/326 (57%), Gaps = 12/326 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR+      + ++ ++   L++A       +  +D   G ++  N     W PASLTKLM
Sbjct: 1   MRKLFYKFFLFLVLSMMSRLALAHP-----FISVDLANGRILEHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
            AY+VF  +   +    T ITISK A++ PP  S++K G T+TLD AL + +VKSAND+A
Sbjct: 56  MAYIVFRAMSTGEISPNTSITISKAAAQAPPHRSSYKTGYTITLDAALSITLVKSANDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AI+E++  ++K FV+ MN  ++ LG+  THF NA G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAISEAIAGSQKAFVKQMNAHAQRLGMFGTHFANASGLPDLNNYSTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    +    N+N  +G F G DGMKTGF CASGFNIVASA + +++
Sbjct: 176 FPQYTHYFSIPAIDFGDNQKIQYNSNKLIGRFDGIDGMKTGFICASGFNIVASATRNNRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IAVILGA + + R   +A LL  GF  K         ++ +  +    ++ ++ +++CT
Sbjct: 236 IIAVILGAENIDEREAKAAELLHEGFTKKGSPTSTLATLEPYGTKIT--QITDMRQQICT 293

Query: 299 TQK---EIINYNTQMKEAKDKESHFI 321
            +       +Y+T+     +      
Sbjct: 294 PEAGNIRRSSYDTEGNITLNSPLIAA 319


>gi|262168638|ref|ZP_06036333.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC27]
 gi|262022756|gb|EEY41462.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae RC27]
          Length = 339

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 81/301 (26%), Positives = 136/301 (45%), Gaps = 9/301 (2%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKG 99
           AE   D   +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G
Sbjct: 2   AEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVG 61

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           +T+ + +  + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+ 
Sbjct: 62  TTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLD 121

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKT 218
               Y+T  D+A+L   +  D P+    +  +     G    N N       +  DG+KT
Sbjct: 122 DPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKT 181

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII- 277
           G T  +G+N+V+SA +G+  L+AV++G  + N R   S  LLS GF              
Sbjct: 182 GHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGET 241

Query: 278 ---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              +  +  +       + ++   T       +       +K+      +K  ++     
Sbjct: 242 FVNETIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQ-LKAPLKKGDVVGTLYY 300

Query: 335 K 335
           +
Sbjct: 301 Q 301


>gi|304391580|ref|ZP_07373522.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Ahrensia sp.
           R2A130]
 gi|303295809|gb|EFL90167.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Ahrensia sp.
           R2A130]
          Length = 480

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 154/329 (46%), Gaps = 8/329 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWN 52
           MR    +     L   F  +   +                ++D  TG VI     +    
Sbjct: 13  MRLVFTLFLSTFLVLSFQLMMTGDAEAKRKKKGNPRYAAYVIDAKTGKVIFSRNGNARRY 72

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PASLTK+MT Y+VF  +K  +    T + +SK  S   PS    + G ++++D A+K LI
Sbjct: 73  PASLTKMMTLYLVFEDMKAGRINGKTRLVMSKKGSLQQPSKIGLRAGQSISMDQAVKSLI 132

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
            KSAND+A AI   L  +E +F + M   ++ LG+S T F NA+G+   G  TTA DMA 
Sbjct: 133 TKSANDVATAIGGQLSGSEVEFAKRMTRKARQLGMSRTTFKNANGLTARGQVTTAADMAK 192

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L   ++  FP+    F  +  ++  ++Y N N  +G   G DG+KTG+T ASGFN+V+S 
Sbjct: 193 LGMALREHFPRKYKLFSTRVFKLGKRRYGNHNKLLGRVRGVDGIKTGYTRASGFNLVSSV 252

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             G +S++AV++G     +RN    +L+       +  K+   + +    +        I
Sbjct: 253 QTGGRSIVAVVMGGRSGRSRNAHMQTLIKRHLRKASRGKQRRVVARATGSRGSVATKKVI 312

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFI 321
             +  T     +   +  +  + K S  I
Sbjct: 313 VAKAVTPTPSPLAARSSARSPQQKISSRI 341


>gi|110633932|ref|YP_674140.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mesorhizobium
           sp. BNC1]
 gi|110284916|gb|ABG62975.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Chelativorans
           sp. BNC1]
          Length = 382

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 129/322 (40%), Gaps = 10/322 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             + +   K     LLD  TG ++     D P+ PASL KLMTA ++ + LK  +  +  
Sbjct: 21  ARAQSFETKAAQAFLLDGETGAILYSKNADEPFPPASLAKLMTAELLLNALKTGRISMQR 80

Query: 79  PITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
              +S++A          +       S + ++  L+ +IV+ AND  + +AE +  +E  
Sbjct: 81  EFEVSEHAWRTGGAPSGTATMFAAVNSRVPIEALLQGIIVQQANDGCIILAEGMAGSENA 140

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F + M   ++ LGL+ + F+N  G+   G   T R++A+LS  +  ++P+Y  YF  +  
Sbjct: 141 FARLMTERARALGLTRSVFVNPTGLPAEGQQVTVREIALLSRHLWREYPEYYRYFGQEDF 200

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           E    +    N  +    GADG+  GFT   G+ I AS  +  + L AV+ G  +   R 
Sbjct: 201 EWNRIRQR--NRVLRLGTGADGLALGFTEGQGYAIAASMERNGKRLFAVLAGIPEEQERP 258

Query: 254 KVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           + +  +L  GF     R+                    V   +              +  
Sbjct: 259 EETRKMLEWGFSAFERRQLFTAGEIIGDANVYGGAKGTVALRAAGPLWALVPTGESQSFS 318

Query: 311 KEAKDKESHFIDFEKITLLKNK 332
                        E+   + N 
Sbjct: 319 ARIVYNGPISAPVEEGVAVGNL 340


>gi|15676773|ref|NP_273918.1| penicillin-binding protein [Neisseria meningitidis MC58]
 gi|7226115|gb|AAF41288.1| penicillin-binding protein [Neisseria meningitidis MC58]
 gi|316985771|gb|EFV64715.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis H44/76]
 gi|325139970|gb|EGC62499.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           CU385]
 gi|325200438|gb|ADY95893.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           H44/76]
          Length = 389

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 140/352 (39%), Gaps = 25/352 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENYP 47
           + L ++   +L       +                        + ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNRPTVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A+LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|89895253|ref|YP_518740.1| hypothetical protein DSY2507 [Desulfitobacterium hafniense Y51]
 gi|89334701|dbj|BAE84296.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 379

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 76/345 (22%), Positives = 131/345 (37%), Gaps = 31/345 (8%)

Query: 6   VIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           V + +++  +  P  +             +         L+D  TG ++ +        P
Sbjct: 11  VCVLISLSLSAAPVYAQTTDTNQGLIPTSSLAITADAAVLMDGATGDILYDKNAHKQRPP 70

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK++TA +     K         + +S+ A+    S      G  + L   +   +V
Sbjct: 71  ASTTKILTAILGLELGK-----PDELVVVSEKAAAVGESTIHLDPGEKILLYELVTGAMV 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           KS ND  VAIAE +  TE+ FV+ MN  +  LG   THF N +G+    H +TA D+A++
Sbjct: 126 KSGNDACVAIAEQIAGTEEDFVRLMNQKAFLLGAKNTHFENTNGLPNKNHVSTAYDLALM 185

Query: 174 SWR----IKTDFPQYMHYFQIKGLEIK-GKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +              +   +I  +E        NTN  +  +   DG+KTG T A+G  +
Sbjct: 186 ARYGLQIPAFTSITRLKETEIHFIEPDFFMNLRNTNKLLWNYPYTDGVKTGTTTAAGKCL 245

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNL 285
           VA A +  + LIAV+L A D   R   +  LL  GF        +               
Sbjct: 246 VAGATKDGRQLIAVVLHAPD---RFGDAQKLLEWGFNETETLNCVQAGETIEFPAENSEP 302

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    ++   + +      ++   ++     +  +    L 
Sbjct: 303 IKAFAQNPIQISILKTDKEKLEKKIVWTRE---PGLPIKAGDSLG 344


>gi|222086014|ref|YP_002544546.1| D-alanyl-D-alanine carboxypeptidase protein [Agrobacterium
           radiobacter K84]
 gi|221723462|gb|ACM26618.1| D-alanyl-D-alanine carboxypeptidase protein [Agrobacterium
           radiobacter K84]
          Length = 403

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/351 (19%), Positives = 134/351 (38%), Gaps = 21/351 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +R+F V     +     P ++      A   K     +++ +TG ++     D   +PAS
Sbjct: 2   LRRFTVAFFFLVGIGCLPAVAQQAPPPAFDTKATQAFMVEASTGTILLAKNADQQISPAS 61

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKL 110
           L KLMT  V+F  +K  +  L T   +S+NA          S       S + + + ++ 
Sbjct: 62  LAKLMTLDVIFDAIKRGEISLDTEYPVSENAWRTGGAPSRTSTMFAVLKSRVRVGDLIQG 121

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT----- 165
           + V+ AND  + +AE +  +EK+F + M   ++ +G+    F N+ G+            
Sbjct: 122 IAVQQANDSCIVLAEGISISEKEFARRMTARAREIGMPRAVFTNSTGLPDANDQNGGGKV 181

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           + R++  L+  ++ ++P +  Y              N N  +   +G DG+  GF    G
Sbjct: 182 SVRELVTLAQDLQQNYPDFYKYLAQPDFTWNKIFQRNRNPLLPLNIGVDGLGLGFADGEG 241

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD------ 279
           ++IVAS  +  + L   + G      R + S  +L  G  N   ++              
Sbjct: 242 YSIVASIERDGRRLFLALGGLKTDKERTEESRRVLEWGLSNFKSQRIFADGEVIGNASVY 301

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              Q+    +  +  +V          + ++       +      +   L+
Sbjct: 302 GGAQSTVGLLAKMPVDVYVANDNPDRLSARIVYRWPLTAPVAAGYEAGTLR 352


>gi|291530422|emb|CBK96007.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum 70/3]
          Length = 409

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 20/349 (5%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    +   A+A +       +       A  +      + + +TG V+ E+      
Sbjct: 24  IKRITAGVTAFALAAVMQGASLTAFSEGDVSAVDSITKAAIVTEVSTGQVLYEHNSHERL 83

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS+TKLM   +    +++    + T IT +  A+    S      G  M+  + ++ +
Sbjct: 84  PMASVTKLMCLLIWAEEMEKGTFGMDTVITATARANAMDGSVIWLNVGEEMSAYDMIRSV 143

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAND  VA+ E +  TE+ FV+ MN  ++ LG+S TH+ N  G     HYT+A D A
Sbjct: 144 VIASANDACVAVCEYITGTEEMFVERMNKRAQELGMSDTHYDNCVGFDSDTHYTSAYDTA 203

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +LS    +++  Y  +F  +   +    +  +  NTN  +  + G  G KTG T  +G  
Sbjct: 204 LLSA-AVSEYDCYNEFFATRLDYVREGERQTQLLNTNKMMQRYDGIIGGKTGTTDKAGCC 262

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK------KINYIIKDFY 281
           +   A +G+  L AV LG  +   R      LL+ GF      +       +  +     
Sbjct: 263 LAVWAKRGNMKLCAVALGCKESEQRFTACTDLLNYGFSGFELYRTAVDSDVLTPVTVTEG 322

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +         +   +                 +     EK+  ++
Sbjct: 323 LEKQAEVRVKRLNTIVIPKGSSKRIEYTHTVVDSLSAPVQYGEKVGEVR 371


>gi|332186127|ref|ZP_08387873.1| D-alanyl-D-alanine carboxypeptidase family protein [Sphingomonas
           sp. S17]
 gi|332013942|gb|EGI56001.1| D-alanyl-D-alanine carboxypeptidase family protein [Sphingomonas
           sp. S17]
          Length = 390

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 77/336 (22%), Positives = 138/336 (41%), Gaps = 20/336 (5%)

Query: 18  PFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           P ++ A       P   + D ++G ++ +   D    PAS+ K+MT YV F  +K+ +  
Sbjct: 20  PSIAAAPEFQTTAPVAFMKDLSSGAILFQRDADRRMPPASMAKMMTVYVAFDLIKKGQLK 79

Query: 76  LTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           L   +T+              S         +++ N L  ++  S ND  V +AE +  T
Sbjct: 80  LDDMVTVQPETWAKWHGPQAGSTMFLSPNEQVSVANLLYGIVTLSGNDACVVLAEHIAGT 139

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMH-YF 188
           E+ FV+ MN T+K +GL+ +HF  ++G    G  Y TARD+A L+     DFP+    ++
Sbjct: 140 EQNFVERMNRTAKQIGLANSHFGTSNGWPDGGVTYVTARDLADLAEHTIQDFPKLYKQFY 199

Query: 189 QIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             +                N +  +G   GADG+KTG T  +G+    SA Q  + L+ V
Sbjct: 200 SRRDFTWGKTMGGNAITQANRDPLLGRVAGADGLKTGHTEEAGYGFTGSAEQNGRRLVMV 259

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCT 298
           + G    N R + S   ++ GF     +  +    K    +    + S+       ++  
Sbjct: 260 MAGLTSSNARAEESVKFMNWGFRAWQAKPVVAQGKKVADAEVQMGSSSSVGLVAPRQLTV 319

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           T    ++     K    +       +    + + + 
Sbjct: 320 TLPAGLDPQMSAKVV-YQGPIKAPIKAGQHIADLVI 354


>gi|325202334|gb|ADY97788.1| penicillin-binding protein 6 precursor [Neisseria meningitidis
           M01-240149]
 gi|325207913|gb|ADZ03365.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           NZ-05/33]
          Length = 389

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 140/349 (40%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +  +++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSKQILSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +       + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLVGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A+LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNRALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNISEEVCTT---QKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +                  T  +  +  +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKTTEQILETIQPIPAPVKKGQILGKI 353


>gi|229543957|ref|ZP_04433016.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           coagulans 36D1]
 gi|229325096|gb|EEN90772.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           coagulans 36D1]
          Length = 373

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/334 (22%), Positives = 138/334 (41%), Gaps = 24/334 (7%)

Query: 1   MRQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+++ +  A+A+L           +   + +     L+D +TG ++ E     P + AS+
Sbjct: 1   MKRYFLYAALAVLVFSALPPGAAAADTPSVQAKSAILMDQDTGRILYEKDAYEPRSIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA V     K     +     +S  A     S+   K G    + + +  L+++S 
Sbjct: 61  TKIMTALVAIESGK-----MDKEAVVSNRAVRTEGSSLYLKPGDKWKMKDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--HYTTARDMAILS 174
           ND A  IAE++  + + FV  MN  +K +G+  THF N +G+   G  HY+TA DMA+L 
Sbjct: 116 NDAANVIAENVGGSIEGFVFMMNEKAKEIGMHDTHFANPNGLEDPGGRHYSTAYDMALLM 175

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAI 233
                   ++      K  +     + N N      +    G KTG+T A+   +V +A 
Sbjct: 176 KY-AMQNKEFRKITGTKFYK----GWRNKNRLLTEKYRYCTGGKTGYTKAARRTLVTTAT 230

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +G ++LIAV L   D         ++   GF     ++ +        +     +   + 
Sbjct: 231 KGGENLIAVTLNDSDD---WDDHIAMYEYGFSQYDRKRIVEEGPVAAVRTKYLKQHVYVK 287

Query: 294 EEVCTTQKEI----INYNTQMKEAKDKESHFIDF 323
            ++    K      +    ++K+ ++        
Sbjct: 288 RDITYPLKAGEEDAVKVEYRIKKPENSWKDPEKV 321


>gi|330993785|ref|ZP_08317717.1| D-alanyl-D-alanine carboxypeptidase dacF [Gluconacetobacter sp.
           SXCC-1]
 gi|329759053|gb|EGG75565.1| D-alanyl-D-alanine carboxypeptidase dacF [Gluconacetobacter sp.
           SXCC-1]
          Length = 371

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 86/247 (34%), Positives = 135/247 (54%), Gaps = 1/247 (0%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A+        ++D  TG V+++  PD    PASLTKLMT Y+ F  ++  +  L   
Sbjct: 29  AARAQYAGQVSSIVVDARTGAVLSQQDPDLRRYPASLTKLMTLYLTFKAVRTGQVTLEQQ 88

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHM 138
           + +S +A+   PS    + GS++T++ A+  L+ KSAND A A+ E L   ++  F   M
Sbjct: 89  MPVSVHAASMEPSKLGLRPGSSLTVEQAVLALVTKSANDAACALGEFLGGGDETRFAAMM 148

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
              +  LG+  T F NA G+      T+ARD+A+L+  +  D+ +Y HYF + G    G 
Sbjct: 149 TREAGRLGMYDTVFRNASGLPNPEQMTSARDLAVLARHLIVDYGEYYHYFAVPGFYFHGH 208

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN +  +G + GADG+KTG+T  +G N+V SA++ +  LI V++GA   + RN   A 
Sbjct: 209 AVPNHDPMLGAYPGADGLKTGYTDEAGHNLVTSAVRDNVRLIGVVMGAKSNSRRNTTMAE 268

Query: 259 LLSMGFY 265
           LL   F 
Sbjct: 269 LLDASFQ 275


>gi|134298517|ref|YP_001112013.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
 gi|134051217|gb|ABO49188.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
          Length = 410

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 19/334 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +      +           LLD  +G V+          PAS TK++TA V     +   
Sbjct: 16  TVTSQAWAGQPQITGETAVLLDAKSGAVLYGKEEHKRMYPASTTKVLTALVALEHAR--- 72

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             +T  +TI  N S+   ++   ++G  + +   L  L++ SAND  VAIAE +  +  K
Sbjct: 73  --MTDRVTIGPNPSKAGGTSIWLQEGEQLAMQELLYALMLNSANDAGVAIAEHVAGSVGK 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY----MHYFQ 189
           F    N  ++ LG + THF+N HG+    HY+TA D+A++      +          + +
Sbjct: 131 FAAMSNERARELGANNTHFVNPHGMPNKDHYSTAYDLALIGQAALKNKDLRKILTTIHHE 190

Query: 190 IKGLEIKGKKY-PNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           I   + + +KY  N N         + GA G+KTG+T  +G  I+ASA +    LIAV+L
Sbjct: 191 IPRADPEAQKYLFNHNKLLWSKTYGYKGATGLKTGYTVEAGQCIIASAERNGMELIAVVL 250

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQK 301
            +   N     +A LL  GF N T+R+ +           +   S+       +   T  
Sbjct: 251 RSEGFNL-WTDAAKLLDYGFANFTNRQLVQGGKIMADVPVKYGKSHVKLLAQNDFYYTFP 309

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +    +  +   +  E      +K  +L   + +
Sbjct: 310 KEGTVDLHV-ITEPAEEAKAPVDKGQVLGAVVIQ 342


>gi|90424819|ref|YP_533189.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB18]
 gi|90106833|gb|ABD88870.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB18]
          Length = 588

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 89/311 (28%), Positives = 158/311 (50%), Gaps = 7/311 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++    N      ++D N+G ++  N PD   +PASLTK+MT Y++F  L+  K  L + 
Sbjct: 47  VATESYNPAFASIIVDGNSGDILTANNPDGLRHPASLTKIMTLYLLFERLESGKMQLDSE 106

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + +S++AS   P+    + G T+ +++A+K L+ +SAND AV I+E++   E  F + M 
Sbjct: 107 MDVSEHASIQAPTKLGLRPGQTIRVEDAIKALVTRSANDAAVVISEAIAGDEGDFAKLMT 166

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +++LG++ T + NA G+      TTARD A L   ++  FP+Y  +F       +G  
Sbjct: 167 KKARSLGMTRTVYRNASGLPDDDQVTTARDQATLGRAVQERFPRYYRFFSTSVFNYRGNA 226

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +G+  G DG+KTG+T ASGFN+V S  +G++ LI V+LG     +R+ +  +L
Sbjct: 227 IRNHNRLLGSVEGVDGIKTGYTRASGFNLVTSMHRGNRHLIGVVLGGRSGGSRDAIMRNL 286

Query: 260 LSMGFYNKTDRKKINYIIK-------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           L+      + R+ +  + +           ++ S+  P  + +V    +  +   +   E
Sbjct: 287 LAANLDKASTRRTVTAVAERSTSEANAEVAEDESDNRPTRTVQVQGGIQAPVQVASATAE 346

Query: 313 AKDKESHFIDF 323
                      
Sbjct: 347 PVATPRPAAPI 357


>gi|160915294|ref|ZP_02077507.1| hypothetical protein EUBDOL_01303 [Eubacterium dolichum DSM 3991]
 gi|158433093|gb|EDP11382.1| hypothetical protein EUBDOL_01303 [Eubacterium dolichum DSM 3991]
          Length = 414

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 85/346 (24%), Positives = 149/346 (43%), Gaps = 15/346 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+  LV++ ++                         L++  +G VI   + +    PAS+
Sbjct: 32  MKLALVVLCLSASLLPITARKEVSDVGLKGDAKSVYLMEYTSGKVIYAEHENKRLYPASM 91

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+M   +++  L + +  L   +T S+ A+    S    +   T++ ++ +K + + SA
Sbjct: 92  TKMMGLLLIYEALHDGQLQLDDMVTTSEFAASMGGSQVFLEPQETLSAEDMIKSICIASA 151

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND  VA+ E L  + + FV  MN  +K LG++ THFMNA G+    HYTTA+DMA+L   
Sbjct: 152 NDAMVAMGEHLAGSHEAFVNKMNRKAKELGMNNTHFMNATGLHDDKHYTTAKDMALLGQA 211

Query: 177 IKTDFPQYM------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           +  +  + +      +   I+    K     NTN  +    G DG+KTGFT  +   I  
Sbjct: 212 LLKEGGEELLKITSTYDAYIREDSDKKFWLVNTNKLLKQVEGVDGLKTGFTKEALSCITV 271

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLS 286
           SA + +  LIAV++GA +   RN +++ LL  GF             +     F      
Sbjct: 272 SAKRKELRLIAVVMGASNAKARNAIASGLLEYGFAQYAQGLLYAKGTRLDTLSFENGKPK 331

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                  E++    ++      + KE        + ++K   +   
Sbjct: 332 QADIVALEDISYVFEKGKEPKEKHKEI-TITKKKLPYQKNEKIGTV 376


>gi|296313509|ref|ZP_06863450.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria polysaccharea
           ATCC 43768]
 gi|296839954|gb|EFH23892.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria polysaccharea
           ATCC 43768]
          Length = 389

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 80/328 (24%), Positives = 138/328 (42%), Gaps = 11/328 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +  +  P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K 
Sbjct: 30  LTVHAAPTLQTPETLTA-AHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKS 88

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKT 130
                   + I ++A     S    + G T++ D  LK +I  SAND A+ +A      +
Sbjct: 89  GNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGS 148

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
            + FVQ MN  ++ LG+  T F N  G+ + G  +TA+D+A+LS  +  DFP+Y   F I
Sbjct: 149 IENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSI 208

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K  + K  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    
Sbjct: 209 KSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAE 268

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEII 304
           TR   ++ LL+         K           Q        +         +    KE  
Sbjct: 269 TRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAK 328

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++     +      +K  +L   
Sbjct: 329 TAEQILET---IQPIPAPVKKGQILGKI 353


>gi|291562424|emb|CBL41240.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SS3/4]
          Length = 450

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 89/325 (27%), Positives = 140/325 (43%), Gaps = 14/325 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                  P   L++ +TG VI E   D P NPAS+TK+MT  ++F  L+  K  LT  + 
Sbjct: 83  TGPEITAPSAILMEASTGTVICEKNADEPRNPASVTKIMTLILIFDALQSGKIRLTDEVV 142

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S +A     S    ++G   T++  +K +++ S ND +VA+AE +   E  FV+ MN  
Sbjct: 143 TSAHAKSMGGSQVFLEEGEIQTVETLIKCIVIASGNDASVAMAEFIGGDEGTFVKMMNER 202

Query: 142 SKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           +K LG+  T F++  G+     H TTARD+A++S  + T +PQ  +Y  I    I     
Sbjct: 203 AKGLGMEHTKFIDCCGLTDSPEHVTTARDIALMSRELITKYPQITNYTTIWMENITHVTK 262

Query: 200 -------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                    NTN    + T     G+KTG T  + + + A+A +    LIA I+ A D  
Sbjct: 263 QGTKEFGLSNTNKLLKMATNFEVTGLKTGSTSIAKYCLSATAKKDGVELIAAIMAAPDFK 322

Query: 251 TRNKVSASLLSMGFYN---KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
            R K + +LL+ GF N     D                     +             +++
Sbjct: 323 ARFKDAVTLLNYGFGNCRLYKDETPPELPKLSVTGGKEPEVELSYGVTFTYLGLHGEDFS 382

Query: 308 TQMKEAKDKESHFIDFEKITLLKNK 332
              +E   +ES     +    L   
Sbjct: 383 GVERELMLEESAKAPVKAGDQLGTL 407


>gi|218662722|ref|ZP_03518652.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli IE4771]
          Length = 289

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 137/261 (52%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+     ++A+        +LD  +G V+  +  D    PASLTK+M
Sbjct: 1   MTKITTRLRATALSSALLMCAVAQAEAGQASFVLDVQSGQVLEASNQDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHDGRLTWDQKLTMSENAESKEPFKLAVGAGRKVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + ++ LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 121 VAIAEQLGGSEQAFARTMTDKARQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++G + ++
Sbjct: 181 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKGGRRVV 240

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G      R+   A LL 
Sbjct: 241 GVVMGEKTAGLRDDKMAGLLD 261


>gi|190891891|ref|YP_001978433.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli CIAT 652]
 gi|190697170|gb|ACE91255.1| probable serine-type D-Ala-D-Ala carboxypeptidase protein
           [Rhizobium etli CIAT 652]
          Length = 524

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 140/260 (53%), Gaps = 2/260 (0%)

Query: 3   QFLVIIAMAMLSNIF-PFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + L I++MA+   +     + AE     Y   ++D  TG+V+     D    PASLTK+M
Sbjct: 26  KLLAILSMAVTVVLVDSVNAEAEAANPKYAGIVVDAKTGNVLYSENADRLQYPASLTKMM 85

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A
Sbjct: 86  TLYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAA 145

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E +F Q M   +  LG++ T + NA+G+      TTARD A L   ++  
Sbjct: 146 TALGEMLGGSEDRFAQMMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQH 205

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  YF  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S++
Sbjct: 206 FPQYYGYFSTRAFKFGTRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSIV 265

Query: 241 AVILGALDRNTRNKVSASLL 260
           +V+LG      R+    +L+
Sbjct: 266 SVVLGGTSGPARDAQMRNLI 285


>gi|261392770|emb|CAX50346.1| D-alanyl-D-alanine carboxypeptidase (DD-peptidase;
           DD-carboxypeptidase; CPase; PBP5) [Neisseria
           meningitidis 8013]
 gi|325203950|gb|ADY99403.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           M01-240355]
          Length = 389

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|218675296|ref|ZP_03524965.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli GR56]
          Length = 370

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 115/292 (39%), Positives = 174/292 (59%), Gaps = 2/292 (0%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +   + L+D  TG V+        W PASLTKLMT Y VF  ++  +  L TPI +SK A
Sbjct: 26  QANPHILVDVQTGRVLEHEEAFRKWYPASLTKLMTVYTVFDAIRAGQISLDTPIVMSKRA 85

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +  P +   FK G  +TLD+ALK+L+VKSAND++VA+AE++  T++ FV  MN  +  LG
Sbjct: 86  AAQPAAKMYFKPGQKLTLDSALKILLVKSANDVSVAVAEAIGGTQEGFVTRMNGEALKLG 145

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           ++ +HF+N +G+   G YTTARD+A+L+  ++ DFPQY  YF ++G     +  PN N  
Sbjct: 146 MTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRDFPQYASYFALEGFTTGQQNVPNLNML 205

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G F GADGMKTGF CASGFN + SA +  ++L++V+LG      R   +A+LL  GF  
Sbjct: 206 IGRFAGADGMKTGFICASGFNQIGSATRNGRTLVSVVLGTDSLAARADATANLLQKGFTT 265

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
           +         +K + Q     +V +I+ ++C+ +   I   T+ +  + K S
Sbjct: 266 QFPGNDTLGSLKAYEQGQD--QVTDITADICSAKGAKIRSETRDEVGRMKVS 315


>gi|16077078|ref|NP_387891.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307819|ref|ZP_03589666.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312141|ref|ZP_03593946.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221317074|ref|ZP_03598368.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221321337|ref|ZP_03602631.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus subtilis subsp. subtilis str. SMY]
 gi|585034|sp|P08750|DACA_BACSU RecName: Full=D-alanyl-D-alanine carboxypeptidase dacA;
           Short=CPase; Short=DD-carboxypeptidase;
           Short=DD-peptidase; AltName: Full=Penicillin-binding
           protein 5; Short=PBP-5; Flags: Precursor
 gi|467400|dbj|BAA05246.1| D-alanine carboxypeptidase (PBP-5) [Bacillus subtilis]
 gi|2632277|emb|CAB11786.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 443

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 143/375 (38%), Gaps = 40/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M   ++ +A+  L+ +    +             +++ ++G ++     D     AS+TK
Sbjct: 11  MSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTK 70

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           +MT Y++   + + K            + + + +   SN   +K    T+    +   + 
Sbjct: 71  MMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIY 130

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY---------- 164
           SAN  A+AIAE +  +E KFV+ MN  +K LGL+   F+NA G+     +          
Sbjct: 131 SANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVN 190

Query: 165 ----TTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA------VGT 209
                +A+DMA+L+  + TD+P+ +    I   + +         PN N+          
Sbjct: 191 EESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYK 250

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFYNK 267
               DG+KTG T ++G     +A +    +I V+L A       R   +  +    F N 
Sbjct: 251 KATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNF 310

Query: 268 TDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + ++      +          +          ++      K     N + K   +K++  
Sbjct: 311 SMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLT 370

Query: 321 IDFEKITLLKNKITK 335
              +K T +     +
Sbjct: 371 APVKKGTKVGKLTAE 385


>gi|218671981|ref|ZP_03521650.1| probable D-alanyl-D-alanine carboxypeptidase protein [Rhizobium
           etli GR56]
          Length = 277

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 136/261 (52%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+     + A+        ++D  +G V+  + PD    PASLTK+M
Sbjct: 1   MTKTTSRLRATALSSALLMGAFAQAEAGQASFVVDAQSGQVLEASNPDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L E +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHEGRLTWEQKLTMSENAESKEPFKLAVGAGRRVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + +  LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 121 VAIAEQLGGSEQAFAKTMTDKAHQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++G + ++
Sbjct: 181 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKGGRRVV 240

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G      R+   A LL 
Sbjct: 241 GVVMGEKTAGLRDDKMAGLLD 261


>gi|159185835|ref|NP_356978.2| penicillin-binding protein dacf precursor [Agrobacterium
           tumefaciens str. C58]
 gi|159140969|gb|AAK89763.2| penicillin-binding protein dacf precursor [Agrobacterium
           tumefaciens str. C58]
          Length = 389

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 124/286 (43%), Positives = 173/286 (60%), Gaps = 3/286 (1%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  TG VI+       W PASLTKLMTAY+ FS +K  K    T + +SK A++ P 
Sbjct: 55  MVVDVKTGKVISHQEAFRKWYPASLTKLMTAYIAFSQMKAGKISPQTEVVMSKKAADQPA 114

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   FK G  +T+D+ALKLL++KSANDIAVAIAE++  T   FV  MN  ++ LG+S+TH
Sbjct: 115 SKMYFKPGQKLTMDSALKLLLIKSANDIAVAIAETIGGTSDNFVAQMNAQAQRLGMSSTH 174

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           ++N +G+   G YTTARD+A+L+  IK +FP+Y HYF ++G+    K Y N N  VG F 
Sbjct: 175 YVNPNGLPGKGQYTTARDLALLALIIKREFPEYAHYFSLEGVTTGKKNYANFNMLVGRFE 234

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           GADGMKTGF CASGFN VASA++  +S+I V+LGA     R   SA LL MG    + + 
Sbjct: 235 GADGMKTGFICASGFNQVASAVRNGRSVITVVLGADSLAGRTDQSADLLQMGLTAPSGQG 294

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
                +  +     + EV +IS E+C  +   +    + +  +   
Sbjct: 295 VSLASLAPY---GDTAEVNDISAEICNPKAAKVRSEGRDEAGRMVI 337


>gi|254670388|emb|CBA05903.1| putative penicillin-binding protein precursor [Neisseria
           meningitidis alpha153]
          Length = 389

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 79/324 (24%), Positives = 134/324 (41%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +  +++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 34  AAPTLQTPETLTA-AHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIR 92

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T+  D  LK +I  SAND A+ +A      + + F
Sbjct: 93  SEENLKIPESAWASEGSRMFVRPGDTVGTDKLLKGMIALSANDAALTLAGRLGNGSIENF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+A LS  +  DFP+Y   F IK  +
Sbjct: 153 VQQMNKEARRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFK 212

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            K  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+     R  
Sbjct: 213 FKNIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAEIRAS 272

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 273 DNSKLLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 332

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 333 ILET---IQPIPAPVKKGQILGKI 353


>gi|168187889|ref|ZP_02622524.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum C str.
           Eklund]
 gi|169294277|gb|EDS76410.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum C str.
           Eklund]
          Length = 410

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 27/355 (7%)

Query: 1   MRQFLVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+ L  I + +++          +    T       L+D NTG ++     D  + PAS
Sbjct: 1   MRKLLTFIWIFIITFSVIVYDTKAIDTPPTVSADGVVLMDKNTGQILYSKNLDTQYPPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +     K     L   +TI KNA+    S     +G  +T+ + L  L+++S
Sbjct: 61  TTKIMTALLAIEKCK-----LDDVVTIGKNATNVDGSKIYIFEGEKLTVRDLLYALLLQS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND AVA++E +  + ++FV+ MN  +K LG   T+F+N HG+    H T+ARD+A++  
Sbjct: 116 ANDCAVALSEHISGSTQEFVKLMNTRAKELGCKNTNFVNPHGLYDDKHRTSARDLALILR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG------------TFLGADGMKTGFTCA 223
              +    +      +   I           +              + G +G KTG+T  
Sbjct: 176 -ELSKHEDFKKIATTQIYTINPTNKEPNKRYIWNKDKLVQKKSKCYYEGCEGGKTGYTIQ 234

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF-YQ 282
           S  + VA+A + ++ LIA++L    ++T      +L + GF N T  K  +     + Y+
Sbjct: 235 SKHSFVATATRDNKGLIAILLH-DAKHTYWDDVINLFNFGFNNYTREKLYSKDQCLYNYK 293

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL--KNKITK 335
            +  + VP I+ +     ++  + +    +  D       FEK  ++   N   K
Sbjct: 294 IDKGSTVPLIATKDFYYLRKKGDKDIPQLKVNDISLSNKTFEKGDIILTGNITYK 348


>gi|319899483|ref|YP_004159580.1| penicillin-binding protein [Bartonella clarridgeiae 73]
 gi|319403451|emb|CBI77022.1| penicillin-binding protein [Bartonella clarridgeiae 73]
          Length = 367

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 123/336 (36%), Positives = 194/336 (57%), Gaps = 13/336 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M Q      ++ + +I   L++A       +  +D  TG ++  N     W PASLTKLM
Sbjct: 1   MHQLFHTFFLSFILSITSSLTLAHP-----FISVDATTGRILKHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV+F  +   K      ITISKNA++ P  NS +K GS +TLD ALK+ +VKS ND+A
Sbjct: 56  TAYVIFRAMSTGKISSHKHITISKNAAQAPAINSGYKAGSVLTLDTALKITLVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AI+E++  +++ FVQ MN  ++ LG+  T+F N  G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAISEAISGSQEAFVQQMNAEAQRLGMFGTNFTNTSGLPDPNNYSTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    K    N+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYAHYFSIPAIDFGNGKKIQFNSNNLIGRFDGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IAVILG+   N R + +A LL  GF +K   +     ++ +  +   ++  ++ +++C 
Sbjct: 236 IIAVILGSDSVNKREEKAAQLLDEGFSDKGSLQSTLATLEPYGTK--MSQTTDMRQQICA 293

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +   +  N+  +E     +  +    IT L + I 
Sbjct: 294 PEAIKMRLNSYDEEGNIIFTSPL----ITALPSSIL 325


>gi|163760868|ref|ZP_02167947.1| hypothetical protein HPDFL43_06977 [Hoeflea phototrophica DFL-43]
 gi|162281912|gb|EDQ32204.1| hypothetical protein HPDFL43_06977 [Hoeflea phototrophica DFL-43]
          Length = 441

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 98/321 (30%), Positives = 154/321 (47%), Gaps = 1/321 (0%)

Query: 10  MAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           MA         S A      Y   ++D  TG  +     D    PASLTK+MT Y+VF  
Sbjct: 1   MAFAGLAMALASGAALANSKYAGIVVDAKTGKTLYAYNADQLRFPASLTKMMTLYMVFEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           L+++K  L T I  S NA++ PP+      G ++T++ A+  L+ KSAND + A+AE L 
Sbjct: 61  LEQRKIKLNTRIVFSANAAKEPPTKLGVGTGKSITVEQAIYALVTKSANDASTAVAEHLG 120

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +E KF + M   +++LG+S T F NAHG+      TTARDMA L   ++  FP+   YF
Sbjct: 121 GSEAKFARMMTAKARSLGMSRTTFRNAHGLPNSKQVTTARDMARLGIALREHFPRQYKYF 180

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             +  +    +  N N  +GT  G DG+KTG+T ASGFN+V+S +  ++S++AV++G   
Sbjct: 181 ATRSFKFGKTRLSNHNRLLGTVRGVDGIKTGYTRASGFNLVSSVVDRNRSIVAVVMGGRT 240

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +RN     L++      + R   N I +          +           +   +   
Sbjct: 241 GASRNAQMKKLIAGYLSKASTRGSGNLIARGAPSTISVAALELPKVGPVPNLRHKASARM 300

Query: 309 QMKEAKDKESHFIDFEKITLL 329
            +  A    +  +  E +   
Sbjct: 301 ALAYAAPSPAPVVGREALAQS 321


>gi|332977394|gb|EGK14172.1| serine-type D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
          Length = 377

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 148/353 (41%), Gaps = 26/353 (7%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR  ++L+ + +  +  + P  S+A               ++D  +G ++ E        
Sbjct: 1   MRLTRWLLAVWIGGVLVLLPAESLASHRPDHLELSARAAAVIDVQSGRILYEKKAGQQMR 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            ASLTK+MTA V           LT  + +   A     S+   K G  + L++ L  L+
Sbjct: 61  IASLTKIMTAIVAIENSD-----LTEKVKVKPGAVGVEGSSIYLKPGEEIPLEHLLYGLM 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND AVAIAE +  + + FV  MN  ++ LGL  THF N HG+    HY++A D+A 
Sbjct: 116 LRSGNDAAVAIAEHVGGSVEGFVYKMNEKAEYLGLRNTHFQNPHGLDAKEHYSSAEDLAR 175

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGK------KYPNTNWAVGTFLGADGMKTGFTCASGF 226
           L+     + P++      +   +         K+ N N  +  + G DG+KTGFT  S  
Sbjct: 176 LTAYALKN-PEFRKIVSTQVKTVPWPGEEWHRKWYNKNKMLRLYPGGDGVKTGFTKLSRR 234

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQ 283
            +V+SA +  + +  V L A +     + S  LL  GF +    + +    +       +
Sbjct: 235 TLVSSATREGRQIATVTLNAPND---WEDSMRLLEYGFRHFQRVRLVKKGEEFSSGLKGR 291

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                V + S     T++E      +       +   +   ++   +  +  K
Sbjct: 292 APLEIVASRSFTYPLTEEERDRVEVRPMITYPLKKAKVSGIRVGTARIFVEGK 344


>gi|23099281|ref|NP_692747.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
 gi|22777510|dbj|BAC13782.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Oceanobacillus iheyensis HTE831]
          Length = 367

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 12/315 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR F+ ++   +L   FP    A  +       L++ +TG V+ E   +   + AS+TK+
Sbjct: 2   MRVFIGLLTSLILFMSFPSYGQALPSVSANNAVLIEQSTGRVLFEKNANEEASIASITKI 61

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA +          ML   +T S+ A     S+   ++G  + L + +  L+++S ND 
Sbjct: 62  MTAIIAIE-----SGMLDEQVTTSRKAIYTEGSSIYLEQGEEIPLKDLVYGLMLRSGNDA 116

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVAIAE +  +E+ FV  MN  +K LG+  THF N HG+    HY++A DMAIL      
Sbjct: 117 AVAIAEHVGGSEEGFVYLMNEKAKWLGMENTHFDNPHGLDSDTHYSSAYDMAILMKYAMD 176

Query: 180 DFPQYMHYFQIKG-LEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           +                +   + N N      +    G KTG+T A+G  +V SA +   
Sbjct: 177 NPMFREVSQSDSYLSNNRTYHWQNKNKLLTRLYEYCTGGKTGYTKATGRTLVTSAHKNGM 236

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ-NLSNEVPNISEEV 296
            LIAV L A D     +    +   GF     +         ++ +   S    N ++ V
Sbjct: 237 DLIAVTLDAPDD---WQDHIGMFEWGFEQFEMKTVQEEGTALYHIEPKTSKVYGNYNKAV 293

Query: 297 CTTQKEIINYNTQMK 311
                +  N N  +K
Sbjct: 294 NLPLLKDGNDNVDVK 308


>gi|261406005|ref|YP_003242246.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. Y412MC10]
 gi|261282468|gb|ACX64439.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. Y412MC10]
          Length = 394

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 15/295 (5%)

Query: 1   MRQFLVIIAMAMLSNI--FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M   L+ I   +++ +          +N      L+D  +G ++     D     ASLTK
Sbjct: 12  MLSMLIAICCLLVTAVPVHADHEQGPSNHAQAAALIDVTSGRMLYSKNGDERLRIASLTK 71

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MTA V     K     L   + +SKNA     S+   K G  MTL+N L  L+++S ND
Sbjct: 72  IMTAIVAIEHGK-----LDDRVKVSKNAFAKEGSSIFLKLGEEMTLENLLYGLMLRSGND 126

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A AIAE +  TE+ FV  MN  + +LG++ +HFMN HG+    HY++A D+A L+    
Sbjct: 127 AATAIAEHVGGTEEGFVLLMNEKAASLGMTNSHFMNPHGLDHDEHYSSAHDVAKLTAYAL 186

Query: 179 TDFPQYMHYFQIKGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            +                       K+ N N  +  + GADG+KTG+T  +   +V+SA 
Sbjct: 187 KNPVFSEIVKTPTKKAPNPNEAWDYKWDNKNKMLRFYEGADGVKTGYTKKAFRCLVSSAT 246

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +  Q + AV L   +        +++L  GF +   +K      K      ++  
Sbjct: 247 RNGQQIAAVTLNDGND---WNDHSNMLDYGFAHFPLKKVTEKGQKIQGYPLVTGS 298


>gi|49474795|ref|YP_032837.1| penicillin-binding protein [Bartonella quintana str. Toulouse]
 gi|49240299|emb|CAF26780.1| Penicillin-binding protein [Bartonella quintana str. Toulouse]
          Length = 365

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 118/326 (36%), Positives = 190/326 (58%), Gaps = 12/326 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MRQ L  + ++ + N+   + +A+      +  +D  TG ++  N     W PASLTKLM
Sbjct: 1   MRQLLYNLFLSFILNLTSTIVLAQP-----FISVDVTTGRILEHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV+F  +   K      ITIS+ A++ P  +S +K GS +TLD AL + +VKS ND+A
Sbjct: 56  TAYVIFRAMSIGKISSNKHITISEYAAKAPTYHSGYKAGSVLTLDTALSITMVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A++E++  ++K FVQ MN  ++ LG+  THF NA G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAMSEAVAGSQKAFVQQMNAEAQRLGMFGTHFTNASGLPDPHNYSTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++   K+   PN+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYAHYFSIPAIDFGNKRKIQPNSNNLIGRFDGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IAVILG+   + R + +A LL  GF ++   +     ++ +  + +     ++ ++ CT
Sbjct: 236 IIAVILGSNTISEREEKAAQLLERGFLHQGSLQSTLATLEPYGTKMIQAS--DMRQQTCT 293

Query: 299 T---QKEIINYNTQMKEAKDKESHFI 321
               +    +Y+ Q     +      
Sbjct: 294 PEAMKMHANSYDDQGNIILNSPFIAA 319


>gi|296284125|ref|ZP_06862123.1| D-alanyl-D-alanine carboxypeptidase [Citromicrobium bathyomarinum
           JL354]
          Length = 378

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 79/340 (23%), Positives = 147/340 (43%), Gaps = 11/340 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M  FL  +++A+ + +    S     + P   ++D ++G  +     D  + PAS+TK+M
Sbjct: 1   MVGFLAALSLALPTGLSAQPSPPTPEQAPIAYMIDLSSGQTLYARDIDRRFVPASITKVM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITI---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T  V F  L + K      +     S +      S     + +  +++  L  +   SAN
Sbjct: 61  TTLVAFDMLADGKLRRDQRMPYRDASFDEWHRKGSTLFLPRRARPSVNELLIGITTVSAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH-YTTARDMAILSWR 176
           D AV +AE    +  K+   MN T++++G+  ++F   +G    GH +T+ARD+ +L+ R
Sbjct: 121 DAAVVLAEGASGSVDKWTARMNATARSIGMHDSYFGTPNGWPDEGHTFTSARDLGLLAKR 180

Query: 177 IKTDFPQYMHYFQ-IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           I    P +  Y+    GL+  G    N +   G   GADG+KTG+T  +G+  + +A + 
Sbjct: 181 IIRGHPDFFDYYYGRTGLKAYGIAQDNHDPITGRVDGADGLKTGYTDQAGYGFLGTAERD 240

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV---PNI 292
            + L+ V+ GA     RN+ +   +  GF        +         Q  +  V   P +
Sbjct: 241 GRRLVMVVAGADRGQVRNRAARDFIEWGFDAFDSTLLVRKGKPAASAQVQNGAVDQLPLV 300

Query: 293 SEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +   V T + +       ++      +     E +  L
Sbjct: 301 AAQDIRVATPRGDGARPELTVRYDGPLRAPIAKGEAVATL 340


>gi|325206288|gb|ADZ01741.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           M04-240196]
          Length = 389

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|163759954|ref|ZP_02167038.1| putative penicillin-binding protein [Hoeflea phototrophica DFL-43]
 gi|162282912|gb|EDQ33199.1| putative penicillin-binding protein [Hoeflea phototrophica DFL-43]
          Length = 371

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 116/298 (38%), Positives = 174/298 (58%), Gaps = 2/298 (0%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                 +D  +G VIA       W PASLTK+MTAYV FS +K  +  + TP+T+S +A+
Sbjct: 2   ATPSIAVDVGSGRVIAHEDAFQRWYPASLTKIMTAYVAFSAVKSGQMSMDTPVTMSIHAA 61

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           + PPS   FK G    LD+ALK L+VKSAND+AVAIAE++  +E+ FV+ MN T+K LG+
Sbjct: 62  KEPPSKMYFKPGERFPLDSALKYLMVKSANDVAVAIAEAVSGSEEAFVREMNATAKALGM 121

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
            AT F+N +G+   G YTTARDMA+L+   + +FP+Y  YF  +G  +  + + N N  +
Sbjct: 122 QATRFVNPNGLPGSGQYTTARDMAVLAAAARRNFPEYAQYFGYEGFSVGKQVHTNYNLLI 181

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
           G F GADGMKTGF CASGFN V+SA +  +++++V+LGA  +  R + SA+LL     + 
Sbjct: 182 GRFQGADGMKTGFICASGFNQVSSATRNGRTVVSVVLGAPSQTARAERSAALLQAALTSS 241

Query: 268 TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                    +  + +    + V +IS ++C+++        + +      S     E 
Sbjct: 242 GSVSPSLASLAPYGEG--RDAVADISAQICSSEARAARDKNRDENGNLVLSSPFLVEP 297


>gi|260459198|ref|ZP_05807453.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259034752|gb|EEW36008.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 482

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 89/273 (32%), Positives = 139/273 (50%), Gaps = 12/273 (4%)

Query: 1   MRQFLV------------IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           MR+ L+            I+  A+          +         ++D  TG V+     +
Sbjct: 1   MRKALLGIVSRSTSPLKAIMVFALALTFVCADVASSLAARQAAIVVDAKTGKVLYSADAN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
               PASLTK+MT Y+ F  L + K    TP+  S  AS   P+    K G ++T+D A+
Sbjct: 61  GRRYPASLTKMMTLYLTFEALAKGKISRNTPVVFSAKASAEAPTKLGVKPGGSVTVDTAI 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             ++ KSAND A A+ E +   E  F + M   ++ LG++ T F NA+G+   G +TTAR
Sbjct: 121 LSIVTKSANDSATALGEMIGGNETNFARMMTAKARQLGMNGTVFRNANGLPDPGQFTTAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           DMA L   ++  FPQY  YF  +      ++    N  +G   G DG+KTG+T ASGFN+
Sbjct: 181 DMATLGIALREHFPQYYGYFSQRSFLYGRQRINGHNRLLGRIKGVDGIKTGYTRASGFNL 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           V+S   G++ L+AV++G     +R+   A+L++
Sbjct: 241 VSSVSDGNRRLVAVVMGGTSGGSRDNQMAALIN 273


>gi|329929810|ref|ZP_08283486.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
 gi|328935788|gb|EGG32249.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
          Length = 394

 Score =  172 bits (435), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 15/295 (5%)

Query: 1   MRQFLVIIAMAMLSNI--FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M   L+ I   +++ +          +N      L+D  +G ++     D     ASLTK
Sbjct: 12  MLSMLIAICCLLVTAVPVHADHEQGPSNHAQAAALIDVTSGRMLYSKNGDERLRIASLTK 71

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MTA V     K     L   + +SKNA     S+   K G  MTL+N L  L+++S ND
Sbjct: 72  IMTAIVAIEHGK-----LDDRVKVSKNAFAKEGSSIFLKLGEEMTLENLLYGLMLRSGND 126

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A AIAE +  TE+ FV  MN  + +LG++ +HFMN HG+    HY++A D+A L+    
Sbjct: 127 AATAIAEHVGGTEEGFVLLMNEKAASLGMTNSHFMNPHGLDHDEHYSSAHDVAKLTAYAL 186

Query: 179 TDFPQYMHYFQIKGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            +                       K+ N N  +  + GADG+KTG+T  +   +V+SA 
Sbjct: 187 KNPVFSEIVKTPTKKAPNPNEAWDYKWDNKNKMLRFYEGADGVKTGYTKKAFRCLVSSAT 246

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +  Q + AV L   +        +++L  GF +   +K      K      ++  
Sbjct: 247 RNGQQIAAVTLNDGND---WNDHSNMLDYGFAHFPLKKVTEKGQKIQGYPLVTGS 298


>gi|261400191|ref|ZP_05986316.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria lactamica ATCC
           23970]
 gi|269210194|gb|EEZ76649.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria lactamica ATCC
           23970]
          Length = 388

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 10/323 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                         + ++D  +   ++    D P  PA+L +LMTAY+VF  LK      
Sbjct: 33  AASSPQTPETLAAAHVVIDLQSRQTLSAKNIDAPAEPAALAQLMTAYLVFKNLKSGNIRP 92

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFV 135
              + I ++A +   S    + G ++  D  LK +IV SAND A+ +A      + + FV
Sbjct: 93  EETLKIRESAWKSEGSRMFVRPGGSVRTDTLLKGMIVLSANDAALTLAGRLGNGSIENFV 152

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + MN  ++ LG+  T F N  G+ Q    +TARD+A+L+  +  DFP+Y   F IK  + 
Sbjct: 153 KQMNEEARRLGMKNTLFRNPTGLSQERQVSTARDLALLAEALMRDFPEYYPLFSIKSFKF 212

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           +  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR   
Sbjct: 213 ENIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASD 272

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE------EVCTTQKEIINYNTQ 309
           ++ LL+         K           Q        +         +    KE       
Sbjct: 273 NSKLLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEVYITLPHKEAKTAEQI 332

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
           ++     +      +K  +L   
Sbjct: 333 LET---IQPIPAPVKKGQILGKI 352


>gi|51893725|ref|YP_076416.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51857414|dbj|BAD41572.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 374

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 85/332 (25%), Positives = 130/332 (39%), Gaps = 30/332 (9%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            LLD  TG V+ E  PD P  PASLTKLMT ++ F  ++  +     P+ +S+NA     
Sbjct: 1   MLLDFATGQVLYEKNPDEPIAPASLTKLMTLHLAFKRIEAGQMSYDDPVVVSRNAWAANF 60

Query: 92  SN---STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
            +      + G  +T+   +K L + S ND AVA+AE +  T + FV+ MN+ ++ LG  
Sbjct: 61  PDSSLMFLEPGDKVTVGEVMKGLAIVSGNDAAVALAEHIGGTVENFVKMMNDEAQALGFK 120

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---------- 198
              F++ HG+      T           I+            K                 
Sbjct: 121 TFRFVDPHGLSPQNQVTAGEFARFARLYIQLHPESLEMLHSQKEYSYPQYENLSDARQAV 180

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA--- 246
                       N N  + T+ G DG+KTGF   +GFN+  +A +G   L+ V+LG    
Sbjct: 181 TSPEAHEPITQMNRNGLLWTYEGVDGLKTGFVDEAGFNLAVTAQRGGMRLVGVLLGIQAD 240

Query: 247 ---LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD--FYQQNLSNEVPNISEEVCTTQK 301
                   R    A+LLS GF N    K     +K    ++   +      +    T   
Sbjct: 241 SIPEGSAKREAEGAALLSWGFNNFVTVKPQMPEVKPVRVWKGAANEVTLQAAGGTPTLVL 300

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           E    ++     + +ES      K   L   I
Sbjct: 301 EKGLESSLTASVRQEESVTAPVAKGQKLGEVI 332


>gi|296533026|ref|ZP_06895674.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseomonas cervicalis
           ATCC 49957]
 gi|296266655|gb|EFH12632.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseomonas cervicalis
           ATCC 49957]
          Length = 293

 Score =  172 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 90/268 (33%), Positives = 146/268 (54%), Gaps = 3/268 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+  ++ A  +L N+ P L+ A+         +++ N+G+V+     D P +PASLTK+
Sbjct: 7   LRRLGLLAATTVLFNL-PGLAQAQIGSARYAAVVIEPNSGNVLFGANADAPRHPASLTKM 65

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+VF  L+  +  L   + +++ A+  PPS      G T+T++NA+  L+ KSAND+
Sbjct: 66  MTLYMVFDALRAGRLELDQRLEMTETAASRPPSKLGLPPGRTITVENAIYALVTKSANDV 125

Query: 120 AVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           A  + E+L    +  F Q M   ++ +G+++T F NA G+      TTA DMA L  R+ 
Sbjct: 126 AALLGETLGAGSEARFAQMMTLRARAMGMTSTTFRNASGLPDVEQITTAHDMATLGRRLL 185

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            DFP+  HYF  +   +      N N  +  + G DG+KTG+   SGFNIV SA + +  
Sbjct: 186 HDFPERYHYFGTRTHRMGSIALRNHNRMLDEYEGVDGIKTGYINDSGFNIVTSARRSNVR 245

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYN 266
           L+  + G      R++ +A+LL  GF  
Sbjct: 246 LVVAVFGGSSWVERDRHAAALLERGFSQ 273


>gi|313668657|ref|YP_004048941.1| D-alanyl-D-alanine carboxypeptidase [Neisseria lactamica ST-640]
 gi|313006119|emb|CBN87580.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria lactamica
           020-06]
          Length = 388

 Score =  172 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 75/323 (23%), Positives = 130/323 (40%), Gaps = 10/323 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                         + ++D  +   ++    D P  PA+L +LMTAY+VF  LK      
Sbjct: 33  AASSPQTPETLAAAHIVIDLQSRQTLSAKNIDAPVEPAALAQLMTAYLVFKNLKSGNIRP 92

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFV 135
              + I ++A +   S    + G ++  D  LK +IV SAND A+ +A      + + FV
Sbjct: 93  EETLKIRESAWKSEGSRMFVRPGGSVRTDTLLKGMIVLSANDAALTLAGRLGNGSIENFV 152

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + MN  ++ LG+  T F N  G+ Q    +TARD+A+L+  +  DFP+Y   F IK  + 
Sbjct: 153 KQMNEEARRLGMKNTLFRNPTGLSQERQVSTARDLALLAEALMRDFPEYYPLFSIKSFKF 212

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           +  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR   
Sbjct: 213 ENIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASD 272

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE------EVCTTQKEIINYNTQ 309
           ++ LL+         K           Q        +         +    KE       
Sbjct: 273 NSKLLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEVYITLPHKEAKTAEQI 332

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
           ++     +       K  +L   
Sbjct: 333 LET---IQPLRAPVRKGQVLGKI 352


>gi|167749174|ref|ZP_02421301.1| hypothetical protein EUBSIR_00125 [Eubacterium siraeum DSM 15702]
 gi|167657852|gb|EDS01982.1| hypothetical protein EUBSIR_00125 [Eubacterium siraeum DSM 15702]
          Length = 389

 Score =  172 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 74/349 (21%), Positives = 143/349 (40%), Gaps = 20/349 (5%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +++    +   A+A+++      +          +      + + +TG V+ E+      
Sbjct: 4   IKRITAVVTAFALAVVTQGASLTAFSEGDVSEADSITKAAIVTEVSTGQVLYEHNSHERL 63

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS+TKLM   +    +++    + T IT +  A+    S      G  M+  + ++ +
Sbjct: 64  PMASVTKLMCLLIWAEEMEKGTFGMDTVITATARANAMDGSVIWLNVGEEMSAYDMIRSV 123

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAND  VA+ E +  TE+ FV+ MN  ++ LG+S TH+ N  G     HYT+A D A
Sbjct: 124 VIASANDACVAVCEYIAGTEEMFVERMNKRAQELGMSDTHYDNCVGFDSDTHYTSAYDTA 183

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +LS    +++  Y  +F  +   +    +  +  NTN  +  + G  G KTG T  +G  
Sbjct: 184 LLSA-AVSEYDCYNEFFATRLDYVREGERQTQLLNTNKLMQRYDGIIGGKTGTTDKAGCC 242

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNL 285
           +   A +G+  L AV LG  +   R      LL+ GF      +    + ++        
Sbjct: 243 LAVWAKRGNMKLCAVALGCKESEQRFTACTDLLNHGFSGFELYRTAVDSDVLTPVTVTEG 302

Query: 286 SNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +I  +    +   +                 +     EK+  ++
Sbjct: 303 LEKQADIRVKRLNTIVIPKGSSKRIEYTHTVVDSLSAPVQYGEKVGEVR 351


>gi|160931610|ref|ZP_02079005.1| hypothetical protein CLOLEP_00442 [Clostridium leptum DSM 753]
 gi|156869481|gb|EDO62853.1| hypothetical protein CLOLEP_00442 [Clostridium leptum DSM 753]
          Length = 381

 Score =  172 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 70/349 (20%), Positives = 136/349 (38%), Gaps = 23/349 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +   ++A A +       + A     +       L+  +   V+ E   +     AS TK
Sbjct: 10  KLCALLAAAGILTSAGTPAAANGGEPSVSAKAAVLMTADNSTVLYEKAAEEKLPMASTTK 69

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MTA +     + +       + I+        S+   K G+ +TL    + +++ S ND
Sbjct: 70  IMTALLTLEAAQAE----DRQVKITDEMVRVEGSSMGLKPGNVVTLTALAQGMLLCSGND 125

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A A A ++  + ++F + MN  +K +G+  T+F+   G+    HYTTA DMA+L     
Sbjct: 126 AANAAAIAIAGSTEEFAKLMNQRAKQIGMKNTNFVTPSGLDDENHYTTAYDMALLGAC-A 184

Query: 179 TDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
            +  ++      K ++++         + N N  +  + G  G+KTGFT  SG  +V+ A
Sbjct: 185 MENQRFREIASQKSMQVQFVEPDMKYTFGNHNRLLTAYEGCIGVKTGFTKKSGRCLVSCA 244

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN-----KTDRKKINYIIKDFYQQNLSN 287
            +    L+AV L A D         ++L  GF         D      +      ++  +
Sbjct: 245 ERDGVRLVAVTLNAPDD---WNDHKAMLDYGFSKVKQVSFDDTALGLQVPVVGGVRDSIS 301

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                +       +E      +++      +     + +  L  +I  K
Sbjct: 302 VNGAFTAGASVLAEEESGIEKRIEVPAFLYAPVRKGQTVGKLTYEINGK 350


>gi|325133984|gb|EGC56639.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           M13399]
          Length = 389

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|237749357|ref|ZP_04579837.1| penicillin-binding protein 6. serine peptidase. merops family s11
           [Oxalobacter formigenes OXCC13]
 gi|229380719|gb|EEO30810.1| penicillin-binding protein 6. serine peptidase. merops family s11
           [Oxalobacter formigenes OXCC13]
          Length = 397

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 73/334 (21%), Positives = 141/334 (42%), Gaps = 14/334 (4%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           N+      A T     + L+D  +  V+A +         +  +LMTAY+VF  +K+ K 
Sbjct: 35  NVHAAGVAAPTLTSRSWLLIDVVSNQVLASSNSQERIRAGTPARLMTAYLVFGAIKDGKL 94

Query: 75  MLTTPITISKNASEYP--PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            L   +++S               + GS++T+   L  LIV+ + D A+ +A ++   EK
Sbjct: 95  NLDKTVSVSDEIGAMESGGPRMFLQPGSSVTIQQLLDGLIVQGSEDAALTLALAVSGDEK 154

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV  MN  +  LG+ +T+F + +       Y+T  D+++L+  +  D+P Y   F  + 
Sbjct: 155 SFVDLMNREAVRLGMKSTNFTHPYETADKDSYSTPNDLSVLAVNLMRDYPDYYSGFSTRE 214

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG----DQSLIAVILGALD 248
                    N N  +      DG+    +     ++V SA +     ++ +++V++GA+ 
Sbjct: 215 FTYNKITQRNPNRLLWVDPTVDGL--VASAGVRDSMVVSARRDSILGERRMLSVVVGAVS 272

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVP---NISEEVCTTQKE 302
              R + S  LL+ GF N    +       +      +  S +V    N+   V   + E
Sbjct: 273 DQARAQESLKLLNWGFQNFDTIRLYEKNQVVASPEVWKGSSGDVDIGFNVDTYVSVPKGE 332

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           I    T ++      +   +  ++ +LK  +  K
Sbjct: 333 ISRLKTVLERNDPLIAPINEGSQVGVLKILVGDK 366


>gi|255658320|ref|ZP_05403729.1| serine-type D-Ala-D-Ala carboxypeptidase [Mitsuokella multacida DSM
           20544]
 gi|260849639|gb|EEX69646.1| serine-type D-Ala-D-Ala carboxypeptidase [Mitsuokella multacida DSM
           20544]
          Length = 288

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 13/259 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                 ++ A         ++D  TG V+ E   D    PAS+TK+MT  +         
Sbjct: 20  VWSAVAMAAAPDITADAAIVIDEATGQVLYEKNADKREYPASMTKMMTCILALEKS---- 75

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 +T+S NA++   +      G T+ + + L+ +++ S N  A A+ E++   E  
Sbjct: 76  -SPDQLVTVSANAADVECTR--LYPGYTLRMADILQQMMMISDNGAATAVGEAVGGDEAS 132

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------HY 187
           F   MN  ++ +G + THF+N +G+    HY+TARDM  ++     +             
Sbjct: 133 FAAMMNAKAQEIGATHTHFVNMNGMPDADHYSTARDMGKIAAYAMHNDAFRRIVGTKAKN 192

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                 +       NTN  + T+ G  G+KTG+T A+   + A+A +  + LIAV++ + 
Sbjct: 193 IYYIVPQGHTTYCINTNELLDTYEGCTGIKTGWTSAARGCLSAAAKRDGKELIAVVMHSD 252

Query: 248 DRNTRNKVSASLLSMGFYN 266
           D  TR   +A+LL  GF  
Sbjct: 253 DDETRFSEAAALLDYGFEQ 271


>gi|296332949|ref|ZP_06875407.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672708|ref|YP_003864379.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149913|gb|EFG90804.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305410951|gb|ADM36069.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 443

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 72/375 (19%), Positives = 135/375 (36%), Gaps = 40/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M   ++ +A+  L+ +    +             +++ ++G ++     D     AS+TK
Sbjct: 11  MSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTK 70

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT Y++   + + K       T      E    NS             +K L   +A  
Sbjct: 71  MMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIY 130

Query: 119 IAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY---------- 164
            A A A ++ +    +E KFV+ MN  +K LGL+   F+NA G+     +          
Sbjct: 131 SANAAAIAIAEVVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVD 190

Query: 165 ----TTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA------VGT 209
                +A+DMAIL+  + TD+P+ +    I   + +         PN N+          
Sbjct: 191 EESEVSAKDMAILADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYK 250

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFYNK 267
               DG+KTG T ++G     +A      +I V+L A       R   +  +    F N 
Sbjct: 251 KATVDGLKTGSTDSAGSCFTGTAELNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFNNF 310

Query: 268 TDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + ++      +          +          ++      K     N + K   +KE+  
Sbjct: 311 SMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKETLT 370

Query: 321 IDFEKITLLKNKITK 335
              +K T +     +
Sbjct: 371 APVKKGTKVGKLTAE 385


>gi|325135913|gb|EGC58523.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           M0579]
          Length = 389

 Score =  172 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 81/324 (25%), Positives = 137/324 (42%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +  +++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 34  AAPTLQTPETLTA-AHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIR 92

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T++ D  LK +I  SAND A+ +A      + + F
Sbjct: 93  SEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+A LS  +  DFP+Y   F IK  +
Sbjct: 153 VQQMNKEARRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFK 212

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            K  +  N N  +      +G+K G T + G+N+  S     + ++A+ LG+    TR  
Sbjct: 213 FKNIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILAITLGSESAETRAS 272

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 273 DNSKLLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 332

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 333 ILET---IQPIPAPVKKGQILGKI 353


>gi|291544371|emb|CBL17480.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. 18P13]
          Length = 378

 Score =  172 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/342 (19%), Positives = 127/342 (37%), Gaps = 18/342 (5%)

Query: 1   MRQFLVIIAMAM----LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+++L ++   +    L       +         Y L++ +TG V+     D     AS 
Sbjct: 1   MKKWLSLMLAVLCCLHLCCPAVHAADPLGISAQAYVLMEADTGKVLLSKNGDEKRPIAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT  +           L     +   A     S+   ++G  +T       +++ S 
Sbjct: 61  TKIMTTLLCLE-----SGGLDDWFVVDPEAIRVEGSSMGLQEGDVVTKRMLCYGMLLPSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A A A  L  +  +F + MN  +  +G++ T F+   G+   GH  + RDM +L+  
Sbjct: 116 NDAANATAVRLAGSIPEFAKLMNARAARIGMTHTCFVTPSGLDAEGHGASVRDMGLLART 175

Query: 177 IKTDFPQYMHYFQIK-----GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
              +        Q +     G     +   NTN  +  + G  G+KTGFT A+G  +V+ 
Sbjct: 176 AMQNPDFRAICSQSRAEVCFGNPPYNRWLKNTNKLLTMYEGVVGVKTGFTDAAGRCLVSF 235

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI-IKDFYQQNLSNEVP 290
             +   SL+ V L A D          L   GF +   +       +        ++ V 
Sbjct: 236 CERDGVSLLCVTLHAKDD---WNDHMKLYDYGFAHVVSQPVEPPDALSVSVVGGTADTVA 292

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             + +  +   +  +    M + + +   +    +   + N 
Sbjct: 293 LRTRDPLSVGTDNGDLRQLMVQVQVEPFLYAPVPENARVGNL 334


>gi|161869810|ref|YP_001598979.1| D-alanyl-D-alanine carboxypeptidase [Neisseria meningitidis 053442]
 gi|161595363|gb|ABX73023.1| D-alanyl-D-alanine carboxypeptidase [Neisseria meningitidis 053442]
          Length = 389

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 138/352 (39%), Gaps = 25/352 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENYP 47
           + L ++   +L       +                        + ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNRPTAHAAPTLQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|86357827|ref|YP_469719.1| serine-type D-Ala-D-Ala carboxypeptidase protein [Rhizobium etli
           CFN 42]
 gi|86281929|gb|ABC90992.1| probable serine-type D-Ala-D-Ala carboxypeptidase protein
           [Rhizobium etli CFN 42]
          Length = 525

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 3   QFLVIIAMAMLSNIF-PFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + L I++M +   +     + AE     Y   ++D  TG+V+     D    PASLTK+M
Sbjct: 26  KLLAILSMTVTVVLVDSVNAEAEAANSKYAGIVVDAKTGNVLYSENADRLQYPASLTKMM 85

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A
Sbjct: 86  TLYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAA 145

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E +F Q M   +  LG++ T + NA+G+      TTARD A L   ++  
Sbjct: 146 TALGEMLGGSEDRFAQMMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQH 205

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  YF  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S++
Sbjct: 206 FPQYYGYFSTRAFKFGTRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSIV 265

Query: 241 AVILGALDRNTRNKVSASLL 260
           +V+LG      R+    +L+
Sbjct: 266 SVVLGGASGPARDAQMRNLI 285


>gi|209549573|ref|YP_002281490.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209535329|gb|ACI55264.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 291

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 135/261 (51%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+     +           ++D  +G V+  +  D    PASLTK+M
Sbjct: 1   MTKTTSRLLATALSSAVLLGAFTLAEAGQASFVVDAQSGQVLEASNQDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L E +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHEGRLTWDQKLTMSENAESKEPFKLAVGAGRQVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + ++ LG++ T F N  G+      T+ARDMA L   +  D
Sbjct: 121 VAIAEQLGGSEQAFAKAMTDKARQLGMTNTVFRNPSGLPDPEQVTSARDMATLGISLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++  + ++
Sbjct: 181 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKDGRRVV 240

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G    + R+   A LL 
Sbjct: 241 GVVMGEKTASLRDDKMAGLLD 261


>gi|255528214|ref|ZP_05395035.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|255508087|gb|EET84506.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
          Length = 411

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 80/346 (23%), Positives = 136/346 (39%), Gaps = 24/346 (6%)

Query: 1   MRQFLVII--AMAMLSNI---FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ L+ +   + +LS++       +   T       L+D  TG+V+     D  + PAS
Sbjct: 1   MKKLLIFMMSFVFLLSSVSLKAQAKADPPTVSADSVVLMDAITGYVLYGKNEDSAYPPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TKLMTA +     K     L   +T+ KN      S     +G  + + + L  L+++S
Sbjct: 61  TTKLMTALLTLEKCK-----LDDVVTVGKNPPLVDGSKIYLFEGEQLKVRDLLYGLMLQS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND A A+AE +  +   F   MN  +  LG   +HF+N  G+    H T+ARD+A++  
Sbjct: 116 GNDCAEALAEHVGGSIDNFAVLMNKRALELGCRDSHFVNPSGLYDEKHKTSARDLALIMR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK-------YPNTNW-----AVGTFLGADGMKTGFTCA 223
              ++ P+Y         EI             N N      +   + G  G KTG+T  
Sbjct: 176 -ELSNKPEYTQIASTSFYEIPPTNKSAVKRPLWNENKLIQKSSQLYYDGCKGGKTGYTTQ 234

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S  + V+ + +  Q LI  ++   D+ T    + +L + GF                   
Sbjct: 235 SLHSYVSYSTRNGQRLIVALVHDKDK-TFFPDAVNLFNYGFSTFESVLLYKKGDLVATYS 293

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           N    VP ++       K   +        KD+      F+    +
Sbjct: 294 NNGVTVPLLAASDFYYVKLKEDTTVPKFVLKDENLSTKFFKTGDTI 339


>gi|329923410|ref|ZP_08278892.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
 gi|328941302|gb|EGG37596.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
          Length = 336

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 19/278 (6%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + ++      + I    K     L+  +TG V+   + D P  PAS++K+MT  +V  
Sbjct: 46  FGVILIGVFIARVFIPPPIKASSAILIHADTGRVLYAMHADLPLPPASMSKMMTELLVLE 105

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            ++  +      + +S+ A+E P S     +G   TL    + LI+ SAND AVAIAE L
Sbjct: 106 AVRSGQHAWDENVPVSRYAAEVPGSAIGMHEGERYTLKQLFEALIIHSANDAAVAIAEHL 165

Query: 128 CKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQH------------GHYTTARDMAILS 174
             +E +FV+ MN  +K +GLS  T F NA G+                   TARD A+L+
Sbjct: 166 GGSEARFVESMNIRAKEIGLSDRTVFANASGLPAADLVPFAEAASEGDTVMTARDSAMLA 225

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKK--YPNTNWA----VGTFLGADGMKTGFTCASGFNI 228
             +    P  +     + L +  K+     TN         + G DG KTG+T ++G+  
Sbjct: 226 RWLVNKHPDLLEVTSQRDLPVPQKELSLHTTNLMLPGEPHAYQGNDGFKTGYTSSAGYCF 285

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             +A +G   LI+V++G  D + R   +  L+  GF  
Sbjct: 286 TGTASRGGNRLISVVMGTGDADQRFTETRKLMDYGFDR 323


>gi|255022591|ref|ZP_05294577.1| D-alanyl-D-alanine carboxypeptidase DacA (DD-peptidase)
           (DD-carboxypeptidase) (CPase) (Penicillin-binding
           protein [Listeria monocytogenes FSL J1-208]
          Length = 433

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 143/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+N+ G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKAEELKLGEHQFVNSTGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRQGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGAHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K   +         ++++     +
Sbjct: 305 KAGSKVKDPSTIEVDKGKEDTVGLVTKDAVKLVVP-KNDNSPKLNTNVTLEEKTIEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KGTEVGK 370


>gi|153953521|ref|YP_001394286.1| DacA1 [Clostridium kluyveri DSM 555]
 gi|146346402|gb|EDK32938.1| DacA1 [Clostridium kluyveri DSM 555]
          Length = 407

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 23/332 (6%)

Query: 1   MRQFLVIIAMAMLSN-IFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +  I   ++   I P+   A     +       +LD  TG V+    PD  + PAS
Sbjct: 1   MKKIVTFILFFLIICYINPYNVYATQTLPSVSADSAVILDATTGEVLYAKNPDSAYPPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +           L   +T+ KN      +     +G  +T+ + L  L++ S
Sbjct: 61  TTKIMTALLTLENT-----NLNDKVTVGKNPPLVDGTRIGLYEGEELTVKDLLYGLLLAS 115

Query: 116 ANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           AND A A+AE +   + +KF   MN  +  LG   T+F+N  G+    H T+A+D+A++ 
Sbjct: 116 ANDCAEALAEHIGNGSSEKFAIEMNKKAHELGAYNTNFVNPSGLFDEKHKTSAKDLALIM 175

Query: 175 WRIKTDFPQY------MHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCA 223
             +  +           +         K +   N N      +   + G +G KTG+T  
Sbjct: 176 KELCKNPEYSKIATTLYYTIPPTNKSPKERGVWNENKLIQPNSTYYYSGCEGGKTGYTTQ 235

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S  + V++A +  Q LI  ++   ++ T    S SL + GF N +  K  +         
Sbjct: 236 SLHSYVSAATRNGQRLIVALVHDKNK-TFFPDSISLFNFGFDNFSLVKLYSKGDLVTTYN 294

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
             +  VP  +       K   +        K+
Sbjct: 295 KNNISVPLTAASDFYYVKNKDDAAVPSFTLKN 326


>gi|319406361|emb|CBI80002.1| penicillin-binding protein [Bartonella sp. AR 15-3]
          Length = 367

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 112/323 (34%), Positives = 189/323 (58%), Gaps = 9/323 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MRQ    +  + + ++   L++A       +  +D  TG ++  N     W PASLTKLM
Sbjct: 1   MRQLFHTLFFSFILSMIGSLTLAHP-----FISVDATTGRILKHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
             YV+F  +   +      ITISKNA++ P  NS +K GS +TLD ALK+ +VKS ND+A
Sbjct: 56  MTYVIFRAMSTGEISPHKHITISKNAAQAPAINSGYKAGSVLTLDTALKITLVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AI+E++  +++ FV+ MN  ++ LG+  T+F N  G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAISEAISGSQEAFVKQMNAEAQRLGMFGTNFTNTSGLPNPNNYSTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    +    N+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYTHYFSIPAIDFGNGQKIQSNSNNLIGRFDGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +I VILG+   N R + +A LL+ GF +K   +     ++ +  +   +++ ++ +++CT
Sbjct: 236 IIVVILGSDSINKREEKAAELLNAGFSDKGSPQSTLATLEPYGTKI--SQITDMRQQICT 293

Query: 299 TQKEIINYNTQMKEAKDKESHFI 321
            +      ++  ++     +  +
Sbjct: 294 PEAIKTRLDSYDEKGNIILTSPL 316


>gi|58039077|ref|YP_191041.1| D-alanyl-D-alanine carboxypeptidase [Gluconobacter oxydans 621H]
 gi|58001491|gb|AAW60385.1| D-alanyl-D-alanine carboxypeptidase [Gluconobacter oxydans 621H]
          Length = 348

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 89/267 (33%), Positives = 141/267 (52%), Gaps = 2/267 (0%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR  F     +  ++ +    + A+        ++D  TG V++    +    PASLTKL
Sbjct: 1   MRFPFQKAFLLCAMTAMGLGSAKAQYAGHISSYVMDARTGAVLSATDAELQRYPASLTKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+ F  L+  +  L   + +S +AS   PS      G+ +T++  +  L+ KSAND 
Sbjct: 61  MTLYLTFRALEAHQITLDEQVPVSIHASVQAPSKLGLVPGTRLTVEQGILGLVTKSANDA 120

Query: 120 AVAIAESLCKTEK-KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           A A+ E L   ++ +F Q M   ++ LG++ T F NA G+      TTA D+A+LS  + 
Sbjct: 121 ACALGEFLGGGDEVRFAQLMTQQARALGMTNTTFRNASGLPDPDQVTTAHDLALLSQHLI 180

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           +DFPQY HYF +       +  PN +  +  + GADG+KTG+T  +G N++ SA +G+  
Sbjct: 181 SDFPQYYHYFNVPSFYFHRRMVPNHDPMLKIYAGADGLKTGYTDLAGHNLITSAQRGNVR 240

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFY 265
           LI V++GA +   R+    SLL  GF 
Sbjct: 241 LIGVVMGAPNNTRRSMEMVSLLDKGFA 267


>gi|325142125|gb|EGC64550.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           961-5945]
 gi|325198078|gb|ADY93534.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
           G2136]
          Length = 389

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 11/328 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +  +  P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K 
Sbjct: 30  LTVHAAPTLQTPETLTA-AHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKS 88

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKT 130
                   + I ++A     S    + G T++ D  LK +I  SAND A+ +A      +
Sbjct: 89  GNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGS 148

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
            + FVQ MN  ++ LG+  T F N  G+ + G  +TA+D+A LS  +  DFP+Y   F I
Sbjct: 149 IENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSI 208

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K  + K  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    
Sbjct: 209 KSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAE 268

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEII 304
           TR   ++ LL+         K           Q        +         +    KE  
Sbjct: 269 TRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAK 328

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNK 332
                ++     +      +K  +L   
Sbjct: 329 MAEQILET---IQPIPAPVKKGQILGKI 353


>gi|218461037|ref|ZP_03501128.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli Kim 5]
          Length = 294

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 133/261 (50%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +  + L       +           +LD  +G V+  +  D    PASLTK+M
Sbjct: 6   MSKTTSRLLASALPFALLVGAFIPAEAGQASFVLDVQSGQVLEASNQDDLNYPASLTKMM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 66  TLYLAFEALHDGRLTWDQKLTMSENAESKEPFKLAVGAGRKVTLREAVESIVVLSANDSA 125

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + ++ LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 126 VAIAEQLGGSEQAFARTMTDKARQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 185

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++G + ++
Sbjct: 186 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKGGRRVV 245

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G      R+   A LL 
Sbjct: 246 GVVMGEKTAGLRDDKMAGLLD 266


>gi|47092644|ref|ZP_00230431.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes str. 4b
           H7858]
 gi|47018939|gb|EAL09685.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes str. 4b
           H7858]
          Length = 433

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 305 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLNTKVTMKEKTIEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KGTEVGK 370


>gi|227821811|ref|YP_002825781.1| penicillin-binding protein [Sinorhizobium fredii NGR234]
 gi|227340810|gb|ACP25028.1| penicillin-binding protein [Sinorhizobium fredii NGR234]
          Length = 498

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 86/252 (34%), Positives = 134/252 (53%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + +A +     + + A  N      ++D  TG V+     D    PASLTK+MT Y+ F 
Sbjct: 24  VVLAGVVAGLVYSAPALANSKYAGIVVDAKTGKVLYGEDADQLRYPASLTKMMTLYLTFE 83

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L+  +   +TP+  SK A+  PPS    + G  +T++ A+  L+ +SAND A A+ E L
Sbjct: 84  ALEAGRISKSTPVPFSKKAAAEPPSKLGVRAGKAITVEQAVLSLVTRSANDAATALGELL 143

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E++F + M N ++ LG++ T + NA+G+      TTARD A L   ++  FPQY  Y
Sbjct: 144 GGSEQRFARMMTNKARALGMTRTTYRNANGLPNTEQKTTARDQARLGLALRQHFPQYYDY 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +      +   N N  +G   G DG+KTG+T ASGFN+V SA    +S++AV++G  
Sbjct: 204 FSTRSFRFGKQTIGNHNRLLGNVRGVDGIKTGYTRASGFNLVTSAQLDGRSIVAVVMGGT 263

Query: 248 DRNTRNKVSASL 259
               R+     L
Sbjct: 264 SGGARDAQMRKL 275


>gi|4104145|gb|AAD01953.1| penicillin-binding protein homolog [Listeria monocytogenes]
          Length = 433

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 305 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLNTKVTMKEKTIEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KGTEVGK 370


>gi|319783686|ref|YP_004143162.1| beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169574|gb|ADV13112.1| Beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 469

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           L  + +  L+  F F  +A +        ++D  TG V+     +    PASLTK+MT Y
Sbjct: 16  LKTMMIIALAMTFVFGDVASSLAAKQAAIVVDAKTGKVLYSADANGRRYPASLTKMMTLY 75

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  + + K    TP+  S  AS   P+    K G ++T++ A+  ++ KSAND A A+
Sbjct: 76  LTFEAMAKGKISRNTPVVFSAKASAEAPTKLGVKPGGSVTVETAILSIVTKSANDSATAL 135

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            E L   E  F + M   ++ LG++ T F NA+G+   G +TTARDMA L   ++  FPQ
Sbjct: 136 GEMLGGNETTFARMMTAKARALGMNGTVFRNANGLPDPGQFTTARDMATLGIALREHFPQ 195

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           Y  YF  +      ++    N  +G   G DG+KTG+T ASGFN+V+S   G++ ++ V+
Sbjct: 196 YYGYFSQRSFLYGRQRINGHNRLLGRIKGVDGIKTGYTRASGFNLVSSVSDGNRRIVGVV 255

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           +G     +R+   ASL++      + R        D   +   N       +V   + + 
Sbjct: 256 MGGSSGRSRDNQMASLINTYLPRASTR-----GGGDLVAKAGGNNPVTALAQVLLPKHDA 310

Query: 304 INYNTQMKEAKDKESHFID 322
              + +   A+D  +   D
Sbjct: 311 PTPDDKPVVAQDDATVAED 329


>gi|319404878|emb|CBI78479.1| penicillin-binding protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 368

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 117/320 (36%), Positives = 187/320 (58%), Gaps = 9/320 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M Q    +    + +I   LS+A       +  +D  TG ++  N     W PASLTKLM
Sbjct: 1   MHQLFYTLFFFFILSIMSSLSLAHP-----FISVDATTGRILKHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
             Y++F  +   K      ITISKNA++ P  NS +K GS +TLD ALK+ +VKS ND+A
Sbjct: 56  MTYIIFRAMSTGKISPHKHITISKNAAQAPAINSGYKAGSVLTLDTALKITLVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AI+E++  +++ FV+ MN  ++ LG+  T+F N  G+    +Y+TARDMA+L+ +I+ +
Sbjct: 116 IAISEAISGSQEAFVKQMNAEARRLGMFGTNFTNTSGLPNPNNYSTARDMALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    K    N+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYTHYFSIPAIDFGNGKKIQSNSNNLIGRFDGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +I VILG+   N R + +A LL+ GF +K   +     ++ +  +   +++ ++ +++CT
Sbjct: 236 IIVVILGSESINKREEKAAQLLNAGFSDKGSPQSTLATLEPYGTKI--SQITDMRQQICT 293

Query: 299 TQKEIINYNTQMKEAKDKES 318
            +   +  N+  +E     +
Sbjct: 294 PEAIKMRLNSYDEEGNIILT 313


>gi|88607085|ref|YP_505745.1| D-alanyl-D-alanine carboxypeptidase family protein [Anaplasma
           phagocytophilum HZ]
 gi|88598148|gb|ABD43618.1| D-alanyl-D-alanine carboxypeptidase family protein [Anaplasma
           phagocytophilum HZ]
          Length = 386

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 9/338 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F   I   +        +     K P+  + +  +  ++ E+  D P   AS++KLMT Y
Sbjct: 10  FKAFICALIFVLPAHPDASGLRTKAPHAIVFEWGSKTILFEHDVDAPTPTASMSKLMTLY 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   LK     L   + +S+ A+      +  K G  +++++ +K   V S ND  + +
Sbjct: 70  IVLKNLKAGNIKLEDNLRVSEGAASAGAPTAFLKTGQLISVNDLIKGAAVASGNDACITL 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE L  +++KFV+ MN  +K L L  + F+N  G     +  + RD+ ILS RI  DFP+
Sbjct: 130 AEGLYTSQEKFVEEMNRVAKELDLKNSRFVNVTGWPD-DNMMSVRDLLILSARILQDFPE 188

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           Y ++F  K     G    N N  +       DG+KTG T   G+ +VASA++  + ++ V
Sbjct: 189 YYYFFGEKQFTYNGITQKNYNALLNYNNIEVDGIKTGHTRTGGYGMVASALKDGRRVLVV 248

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           I G      R   +  L+     + + +            +         S +V   +  
Sbjct: 249 INGLSTETERAYEAKKLILYALNHFSTKTIFPANG--VVGEISVKHKKGTSLQVFLKEDA 306

Query: 303 IINYNTQMKEA-----KDKESHFIDFEKITLLKNKITK 335
           ++ Y   ++         +ES     +K  L+ + + K
Sbjct: 307 VVTYPKDLEHELHAFLLSQESLKAPIKKGQLVGSLLVK 344


>gi|313901070|ref|ZP_07834558.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. HGF2]
 gi|312954028|gb|EFR35708.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. HGF2]
          Length = 395

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 85/344 (24%), Positives = 152/344 (44%), Gaps = 22/344 (6%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAETNK---------------LPYYTLLDTNTGHVIAE 44
           M++ +V+ +++ +   + P    A+ +K                    L++  TG VI  
Sbjct: 1   MKKLIVLCLSICLCMGLLPQQIHAQDDKTKQEPAQNAQDLAPSAKAAYLVENTTGKVIYA 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
            +      PAS+TK+M   ++F  L +KK      ++ S+ A+    S    + G +M++
Sbjct: 61  KHETDKLYPASMTKMMGLLLIFEALHDKKISWDESVSASEYAASMGGSQVFLEPGESMSV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
            + +K + + SAND  VA+AE +  +   FV  MN+ +K L LS +HFMNA G+    HY
Sbjct: 121 RDMVKSICIASANDAMVAMAEKVGGSNDHFVAMMNDKAKELKLSNSHFMNATGLHDPEHY 180

Query: 165 TTARDMAILSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
           T A+DM+I++  +  +  + +      +   I+    K     NTN  +  + G DG+KT
Sbjct: 181 TCAKDMSIIARALIAEGGEELLRITSTYDAYIRENTDKKFWLVNTNKLLKQYEGVDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           GFT  +   I  +A + D  L+AV +G      RN     +L  GF             K
Sbjct: 241 GFTTEAMSCITVTAKKKDLRLVAVAMGEPSSKQRNAEIKQMLDYGFSQYAQGLLYPKGTK 300

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
                  + +  +++         +    ++ KE K + +   D
Sbjct: 301 LKTYTMENGKPSSVNLVTLKDLVYVFEKGSEPKEQKKEITITKD 344


>gi|330839897|ref|YP_004414477.1| Serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
 gi|329747661|gb|AEC01018.1| Serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
          Length = 376

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 79/330 (23%), Positives = 137/330 (41%), Gaps = 17/330 (5%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +           L++ +TG V+ E   D P  PAS TK+MT  +          
Sbjct: 18  TARAGAAENIQITAASAILIEASTGRVLYEKAADVPRFPASTTKMMTCVLAIEE-----G 72

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L++ +T+S+ A+E   +      G    L   +  ++++S N  +VAIAE L  +   F
Sbjct: 73  DLSSILTVSRTAAETEDT--EVGAGDRFVLAELVAEMMLRSDNGASVAIAEDLAGSVGSF 130

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGL 193
             HMN  +K +G   THF+N +G+    H +TA D+A ++     +   +     + + +
Sbjct: 131 AAHMNEKAKAIGAKDTHFLNPNGLPDPAHVSTAHDIARIAAYGMKNPKFRSFVGTKEREI 190

Query: 194 EI-----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                  K  +  NTN  + T+ GA G+KTG+T A+G  + ASA +G   LIAV+LGA D
Sbjct: 191 TWVTPEKKRARMANTNRLLSTYEGATGIKTGYTNAAGGCLAASARRGGVELIAVVLGAAD 250

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYII--KDFYQQNLSNEVPNI--SEEVCTTQKEII 304
              R   +A LL MGF               +  + +        +  +E++     +  
Sbjct: 251 EEARFSDAAKLLDMGFRRVKAAPAYTKTDLARRVWVKGGKEGRLAVYPTEDLRLPLVDGE 310

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                              ++   + + + 
Sbjct: 311 AEENYRLTYDLPRVIAAGVKEGDRVGDLVV 340


>gi|260888699|ref|ZP_05899962.1| serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
 gi|260861568|gb|EEX76068.1| serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
          Length = 438

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 79/330 (23%), Positives = 137/330 (41%), Gaps = 17/330 (5%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +           L++ +TG V+ E   D P  PAS TK+MT  +          
Sbjct: 80  TARAGAAENIQITAASAILIEASTGRVLYEKAADVPRFPASTTKMMTCVLAIEE-----G 134

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L++ +T+S+ A+E   +      G    L   +  ++++S N  +VAIAE L  +   F
Sbjct: 135 DLSSILTVSRTAAETEDT--EVGAGDRFVLAELVAEMMLRSDNGASVAIAEDLAGSVGSF 192

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGL 193
             HMN  +K +G   THF+N +G+    H +TA D+A ++     +   +     + + +
Sbjct: 193 AAHMNEKAKAIGAKDTHFLNPNGLPDPAHVSTAHDIARIAAYGMKNPKFRSFVGTKEREI 252

Query: 194 EI-----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                  K  +  NTN  + T+ GA G+KTG+T A+G  + ASA +G   LIAV+LGA D
Sbjct: 253 TWVTPEKKRARMANTNRLLSTYEGATGIKTGYTNAAGGCLAASARRGGVELIAVVLGAAD 312

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYII--KDFYQQNLSNEVPNI--SEEVCTTQKEII 304
              R   +A LL MGF               +  + +        +  +E++     +  
Sbjct: 313 EEARFSDAAKLLDMGFRRVKAAPAYTKTDLARRVWVKGGKEGRLAVYPTEDLRLPLVDGE 372

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                              ++   + + + 
Sbjct: 373 AEENYRLTYDLPRVIAAGVKEGDRVGDLVV 402


>gi|307572345|emb|CAR85524.1| dacA [Listeria monocytogenes L99]
          Length = 433

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 143/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+N+ G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKAEELKLGEHQFVNSTGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRQGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVITVVLHANGEAPGAHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K   +         ++++     +
Sbjct: 305 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNDNSPKLNTNVKLEEKTIEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KGTEVGK 370


>gi|49476281|ref|YP_034322.1| penicillin-binding protein [Bartonella henselae str. Houston-1]
 gi|49239089|emb|CAF28392.1| Penicillin-binding protein [Bartonella henselae str. Houston-1]
          Length = 368

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 115/320 (35%), Positives = 189/320 (59%), Gaps = 9/320 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L  + ++ + +    L++A+      +  +D  TG ++  N     W PASLTKLM
Sbjct: 1   MQRLLYKLFLSFVLSFTSSLALAQP-----FISVDVKTGRILEHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV+F  +   +      ITIS+ A++ P   S +K GS +TLD AL + +VKS ND+A
Sbjct: 56  TAYVIFRAMSRGEISSNKHITISEYAAKAPTYRSGYKAGSVLTLDTALSITMVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A++E++  ++K FV+ MN  ++ LG+  THF NA G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAMSEAVAGSQKAFVKKMNAEAQRLGMFGTHFANASGLPDPNNYSTARDIALLAIQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++   K+   PN+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYAHYFSIPAIDFGNKRKIQPNSNNLIGRFDGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IAVILG+ + + R K +A LL  GF  +   +     ++ +  +       ++ ++ CT
Sbjct: 236 IIAVILGSKNISEREKKAAKLLETGFSRQGSLQLTLETLEPYGTKMTHAR--DMRQQTCT 293

Query: 299 TQKEIINYNTQMKEAKDKES 318
            +   +N N+   +     +
Sbjct: 294 PEAVKMNANSYDDQGNIILT 313


>gi|225871200|ref|YP_002747147.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus equi subsp. equi
           4047]
 gi|225700604|emb|CAW95134.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus equi
           subsp. equi 4047]
          Length = 411

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 146/365 (40%), Gaps = 31/365 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ +V +A  M        +   +        ++  TG ++           ASLTKL+
Sbjct: 1   MKKLIVTLAALMCLITNTSFAENFSVNSRQAIAVEMTTGKILYAKEAQQKAPIASLTKLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V   +K  +    + +T+S+ A +    P  ++   +    T+   ++  ++ SAN
Sbjct: 61  TVYLVLKEIKAGRLQWDSQVTLSEYALQLATDPDISNPAFEQRPYTIKELVESSLIISAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             AVA+AE +  +E  FV  M    +  G+     +NA G+                  +
Sbjct: 121 SSAVALAEHIAGSEPTFVDMMKKQLEAWGIRDYLLVNASGLNNSMLKGHLYPGSQPDDEN 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
             TARD+A+++ ++  DFP+ +       L+   K  P++N  +        G DG+KTG
Sbjct: 181 QMTARDLALIAQQLIQDFPELLTISSQPQLKWGEKALPSSNLLLAGREMGRAGVDGLKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINY 275
            T  +G  ++A+A+Q +  +I+VIL A     D   R   +  LL   F +    K +  
Sbjct: 241 TTSQAGQTMIATAVQDNMRVISVILHADQSDTDERARFVETNRLLDYCFNSYALEKLVAQ 300

Query: 276 IIKDFYQQNLSNEVP-----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 +  +            S+ +   + +     +     KDK +      +   + 
Sbjct: 301 NQVLPERLIVKQAAKQRLRVKASQTLTVVRPKDQTELSYSLRIKDK-ALKAPIRQNKKVG 359

Query: 331 NKITK 335
             I +
Sbjct: 360 TLIYQ 364


>gi|321313677|ref|YP_004205964.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis BSn5]
 gi|320019951|gb|ADV94937.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis BSn5]
          Length = 443

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 143/375 (38%), Gaps = 40/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M   ++ +A+  L+ +    +             +++ ++G ++     D     AS+TK
Sbjct: 11  MSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTK 70

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           +MT Y++   + + K            + + + +   SN   +K    T+    +   + 
Sbjct: 71  MMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIY 130

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY---------- 164
           SAN  A+AIAE +  +E KFV+ MN  +K LGL+   F+NA G+     +          
Sbjct: 131 SANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVN 190

Query: 165 ----TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA------VGT 209
                +A+DMAIL+  + TD+P+ +    I   + +         PN N+          
Sbjct: 191 EESEVSAKDMAILADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYK 250

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFYNK 267
               DG+KTG T ++G     +A +    +I V+L A       R   +  +    F N 
Sbjct: 251 KATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNF 310

Query: 268 TDRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + ++      +          +          ++      K     N + K   +K++  
Sbjct: 311 SMKEIYAEGDQVKDHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLT 370

Query: 321 IDFEKITLLKNKITK 335
              +K T +     +
Sbjct: 371 APVKKGTKVGKLTAE 385


>gi|150390086|ref|YP_001320135.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
 gi|149949948|gb|ABR48476.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
          Length = 441

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 84/367 (22%), Positives = 141/367 (38%), Gaps = 40/367 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ + +    +++ IF F           +   P   LLD  TG V+ +        PA
Sbjct: 1   MKKSVSLFLTCVITLIFMFNPDISHGEGKPSITAPNGVLLDFQTGEVLYDKNAHEITYPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S TK +TA +V          L   IT+ +       S     KG   T++  L +L+++
Sbjct: 61  STTKALTAILVLEN-----LELDEVITV-EEDMFVGGSGMYLLKGEAFTVNELLHVLMIR 114

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A  +A  +  + + F   MN  +K LG   +HF N HG+    H TTA D+A++ 
Sbjct: 115 SANDVAELLATHISGSVEAFADLMNRRAKELGALNSHFTNPHGLPDEEHVTTAYDLAMIG 174

Query: 175 WRIKTDFP------QYMHYFQIKGLEIKGKKYPNTNWAVG-----------------TFL 211
               T            +  +      + + Y NTN  +                   + 
Sbjct: 175 KHAITFDVLREIAGTVRYDVEPTEFTPETRYYRNTNRFLWGTGSGNQILYRGQYQNIKYD 234

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
             +G+KTGFT A+   ++ASAIQGDQ  I+V+LGA   N     S +L+  GF N    +
Sbjct: 235 IVEGLKTGFTNAAQNCLIASAIQGDQRFISVVLGAQGVNV-YADSRALIDYGFENYQLVQ 293

Query: 272 KINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
            +        +   +           + +       ++ +   K+    +          
Sbjct: 294 LVEEQHYVTTEPLLKGVEDEVSLYSKDSLTKILPIDVDPSLIEKQLIINDELSAPILLEE 353

Query: 328 LLKNKIT 334
                I 
Sbjct: 354 TYGKIIY 360


>gi|240851366|ref|YP_002972769.1| penicillin-binding protein [Bartonella grahamii as4aup]
 gi|240268489|gb|ACS52077.1| penicillin-binding protein [Bartonella grahamii as4aup]
          Length = 363

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 115/327 (35%), Positives = 187/327 (57%), Gaps = 12/327 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++    +  +++ ++F  +++A+      +  +D  TGH++  N     W PASLTKLM
Sbjct: 1   MQRLFYNLFFSVILSLFSAIALAQP-----FISVDVTTGHILKHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV+F  +   +      ITIS+ A++ P   S +K GS +TLD AL + +VKS ND+A
Sbjct: 56  TAYVIFRAMSRGEISPNKHITISEYAAKAPSYRSGYKAGSVLTLDTALSITMVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A++E++  ++K FV+ MN+ +K LG+  THF NA G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAMSEAVAGSQKNFVRKMNSEAKRLGMFGTHFANASGLPDPQNYSTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    +    N+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYAHYFSIPAIDFGNNRKIQHNSNNLIGRFYGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +I VILGA +   R + +A LL  GF ++   +     +K + +        N+ ++ CT
Sbjct: 236 IITVILGANNITEREEKAAQLLETGFLHQGRPQLTLATLKPYGRNITQAN--NMRQQTCT 293

Query: 299 T---QKEIINYNTQMKEAKDKESHFID 322
               +    +Y+ Q             
Sbjct: 294 PEAIKMHANSYDDQGNIILTSPFITAP 320


>gi|150395730|ref|YP_001326197.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
 gi|150027245|gb|ABR59362.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
          Length = 405

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 145/261 (55%), Gaps = 4/261 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +F + +A   +       ++A         ++D  TG V++   PD   +PASLTK+M
Sbjct: 1   MTRFRLALATIAVLFFGTAQAVA----GSASLVVDARTGRVLSAENPDTLNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L   +    TP+ +S  A+  PP+    + G T+T+  A+  +IV+SAND A
Sbjct: 57  TLYMTFEALHRGQLAWKTPVPMSATAARKPPTKLGVRPGETITVQEAVYGMIVRSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE L  TE+ F + MN  ++ LG++ T F+NA G+      TTARDMA L+  +   
Sbjct: 117 AAMAERLGGTEEGFARMMNAKARQLGMNRTFFVNASGLPASEQVTTARDMARLAVALMRH 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P+    F ++    +G+     N  +  + G DG+KTG+T ASG+N+V++  +G++ LI
Sbjct: 177 YPREYRLFSVQSFAFRGRVIRGHNNLMYRYQGMDGIKTGYTRASGYNLVSAVAEGNRRLI 236

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V+LG     +R++  A+LL 
Sbjct: 237 GVVLGGRSARSRDEKMAALLD 257


>gi|116252402|ref|YP_768240.1| D-alanyl-D-alanine carboxypeptidase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115257050|emb|CAK08144.1| putative D-alanyl-D-alanine carboxypeptidase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 291

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 136/261 (52%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+ F   +  +        ++D  +G V+  +  D    PASLTK+M
Sbjct: 1   MTKTTSRLLATALSSFFLMGAFTQVQAGQASFVVDVQSGQVLEGSNQDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHDGRLNWDQKLTMSENAESKEPFKLAVGAGRKVTLREAVEGIVVLSANDAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  TE+ F + M + +  LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 121 VAIAEQLGGTEQVFAKAMTDKAHQLGMKDTVFRNPSGLPDPEQVTTARDMATLGVSLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++  + ++
Sbjct: 181 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKDGRRVV 240

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G    + R+   ASLL 
Sbjct: 241 GVVMGEKTASIRDDKMASLLD 261


>gi|220904314|ref|YP_002479626.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868613|gb|ACL48948.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 258

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/247 (30%), Positives = 126/247 (51%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L++ +TG ++     D    PASLTK+MT Y+    ++  K      I I+   + 
Sbjct: 4   RSAILINMDTGKILYAKNADMAIPPASLTKVMTMYLAMDQIRAGKIKPGEKIRITPQVAA 63

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S+   + G  + L   L  + V S ND A A+A  +   +++FV+ MN  +K LG++
Sbjct: 64  VGGSSMHLRAGERVALSQLLTGMAVVSGNDAATAVARRVGGNDRQFVRAMNQKAKALGMN 123

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T F N  G+   G  TTARDMA ++       P  + Y  ++ L  + +K  NTN  +G
Sbjct: 124 RTTFKNPTGLPAAGQKTTARDMARMTRAYLRSHPSALRYHSVQLLTYRDRKTRNTNGLLG 183

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           T  G +G+KTG+T ASG+N++ +  +G   ++AV++G   R  R+  +  L+  GF +  
Sbjct: 184 TVAGVNGLKTGWTVASGYNLIVTGQRGKTRMLAVVMGGTSRVGRDNAARRLIEAGFRHPA 243

Query: 269 DRKKINY 275
             KK+  
Sbjct: 244 SPKKVQQ 250


>gi|51893513|ref|YP_076204.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51857202|dbj|BAD41360.1| D-alanyl-D-alanine carboxypeptidase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 424

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 89/290 (30%), Positives = 132/290 (45%), Gaps = 17/290 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +++   IIA A+L  +   L  +              L+D  TG V+ E  PD     AS
Sbjct: 10  LKRLRAIIACALLLTLLLRLPASADDTWYETSAESGILMDCATGQVLWEKNPDERLAIAS 69

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +     +     L   +TI   A     S     +G+T TL   L+ LI++S
Sbjct: 70  TTKIMTALLAIESGR-----LDETVTIPPEAELIEGSKVYLTQGTTYTLRELLEALILES 124

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND AVAIA  L  +E+ FV+ MN  ++ LGL+ T F N HG+ + GHY++ARD+A L  
Sbjct: 125 ANDAAVAIAIFLGGSEEAFVRQMNEKARALGLTDTQFRNPHGLDEDGHYSSARDLARLGR 184

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKY------PNTNWAVGTFLGADGMKTGFTCASGFNIV 229
               D P Y      + L     +        N N  +     A G+K G+T A+ F +V
Sbjct: 185 VAMAD-PVYREIAGTEWLTFPWPEMETTREIYNRNLLIQRMPEATGVKNGYTEAALFTLV 243

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
            SA    + +I V+LG  D+         LL  G Y+ +    ++     
Sbjct: 244 GSAAADGREVIGVLLGNPDKEQMYADMERLLRHGLYDFSLTTVLSAGDLP 293


>gi|261377658|ref|ZP_05982231.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria cinerea ATCC
           14685]
 gi|269145924|gb|EEZ72342.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria cinerea ATCC
           14685]
          Length = 389

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 141/349 (40%), Gaps = 18/349 (5%)

Query: 2   RQFLVIIAMAMLSNIF--------------PFLSIAETNKLPYYTLLDTNTGHVIAENYP 47
           +   + +++ + S+                P            + + D  +   ++    
Sbjct: 5   KALSIFLSVILGSSPATADSFFPNRLPANIPSSPQTPETLTAAHIVTDLQSKQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  LK         + I ++A +   S    + G+ +  D+ 
Sbjct: 65  NAPVEPAALTQLMTAYLVFKNLKSGNIRPEETLKIRESAWKSDGSRMFVRPGNLIRTDDL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A+     + + F++ MN  ++ LG+  T F N  G+ Q    +T
Sbjct: 125 LKGMIALSANDAALTLADKLGNGSIENFIKQMNEEARRLGMKDTLFKNPTGLSQERQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           ARD+A+LS  +  DFP+Y   F IK  + K  +  N N  +    G +G+K G T + G+
Sbjct: 185 ARDLALLSEALILDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDSGVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQ 283
           N+  S     + ++ + LG+     R   ++ LL+    +    K  +      K     
Sbjct: 245 NLAVSYTGNGRHILVITLGSESAEIRASDNSKLLNWALQSFDTPKIHSAGEIVTKIQVLG 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                V     +            T  +  +  +       K  +L   
Sbjct: 305 GSKKNVHAGFPKGVYITLPHTQAKTAEQILETIQPLRAPVRKGQVLGKI 353


>gi|239831909|ref|ZP_04680238.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
 gi|239824176|gb|EEQ95744.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
          Length = 426

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 8/307 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +I + A+ + +    +   +     + + D ++G ++ ++  +    PASL K+MT Y+ 
Sbjct: 33  LIASFALGAGVLCTSA---SMASTSWVVFDADSGRILGQDDANIQHAPASLAKMMTLYLA 89

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  LK  +      + ISKNA+         K G T+T+ +A+  +IV SAND A  + E
Sbjct: 90  FEALKTGRLHWDDAMPISKNAASKVRMKLWLKPGETITVHDAIYGMIVISANDAATVMGE 149

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQY 184
            +  +E  F + M   ++ +G+ +T F+N  G+       TTARDMAIL   ++ DFP+ 
Sbjct: 150 YMAGSEAAFGRLMTQRARQIGMKSTFFVNPSGLTAKATQLTTARDMAILGMSLRRDFPEQ 209

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              F  +    + +     N  +  + G DG+KTG+T  SG+N+V+SAI  D+ L+ V+L
Sbjct: 210 YALFSTRSFTFRNRVLNGHNTLMYRYQGVDGIKTGYTDVSGYNLVSSAIINDKHLVGVVL 269

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           GA     R+   A LL       +              +         + +        +
Sbjct: 270 GAGSARQRDDQMAKLL----TRFSTEGAETKGQLVAMAKPQPVAKQTAAAQPKADAVAGL 325

Query: 305 NYNTQMK 311
             +++++
Sbjct: 326 IDDSRIE 332


>gi|308389049|gb|ADO31369.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha710]
          Length = 389

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 80/324 (24%), Positives = 135/324 (41%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 34  AAPTLQTPETLTA-AHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQ 92

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T++ D  LK +I  SAND A+ +A      + + F
Sbjct: 93  SEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+A LS  +  DFP+Y   F IK  +
Sbjct: 153 VQQMNKEARRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFK 212

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            K  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR  
Sbjct: 213 FKNIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRAS 272

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 273 DNSKLLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 332

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 333 ILET---IQPIPAPVKKGQILGKI 353


>gi|255021081|ref|ZP_05293134.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969495|gb|EET27004.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
          Length = 299

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 84/276 (30%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
            L ++A AML +     +               Y L++  TG ++A  +   P+  AS+T
Sbjct: 8   LLSLVACAMLLHSTSARAQNIVQAGLPVIDARAYILMNAETGQILATKHAYRPYAIASIT 67

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KLMT Y++F  L+     L         A     S    + G   T+   +  + V S N
Sbjct: 68  KLMTLYLLFQDLQSGHLSLQQQFKPCPAALHTGGSTMDLRAGVPFTVAQMILGMTVPSGN 127

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D AV  A  +  +   FV+ MN T++ LG+ +T F +  G+    +  +  D+A+L+  I
Sbjct: 128 DAAVEAAHLVSGSVPAFVRKMNRTARQLGMLSTQFYDPDGLPHPNNTASPYDIALLTRAI 187

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            T FPQYM +FQ +     G  YPN N  VG      GMK+G+T A+G  +VA+  Q   
Sbjct: 188 MTQFPQYMPFFQHEHFTYGGITYPNPNLLVGRVPFITGMKSGYTDAAGHCLVATGTQDGV 247

Query: 238 SLIAVILGALD--RNTR-----NKVSASLLSMGFYN 266
            LIAV+LG        R     +  S  LL  GF  
Sbjct: 248 KLIAVVLGVPSFHDEARGFWKASWQSLKLLDWGFAR 283


>gi|118591083|ref|ZP_01548482.1| hypothetical protein SIAM614_15692 [Stappia aggregata IAM 12614]
 gi|118436159|gb|EAV42801.1| hypothetical protein SIAM614_15692 [Stappia aggregata IAM 12614]
          Length = 561

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 98/282 (34%), Positives = 150/282 (53%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A  N      ++D  TG  +  +  D    PASLTK+MT Y+VF  L+  +  L + 
Sbjct: 27  PATAMANPKYAGIVVDAKTGKTLYSSSADSYRYPASLTKIMTLYLVFEELEAGRLSLDSN 86

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +++S  AS  PPS    K G T+ + +A+  L+ KSAND+A  IAE+L  +EKKF + M 
Sbjct: 87  LSVSSYASARPPSKLGLKPGGTIKVKDAILALVTKSANDVASVIAENLGGSEKKFAERMT 146

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
            T++ +G+S T F N HG+  +G  TTARDMA L   I+  FPQY  YF+ +  + KG+ 
Sbjct: 147 RTARQIGMSKTTFRNPHGLPDNGQRTTARDMATLGRAIQERFPQYYGYFKTRAYKYKGRT 206

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           Y N N  +G   G DG+KTG+  ASGFN+V S  +  + ++AV++G     +RN     L
Sbjct: 207 YGNHNKLLGRVKGVDGIKTGYIRASGFNLVTSVNRDGRHIVAVVMGGKTGASRNAQMTKL 266

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           ++      +   K   +I     +     V   +  +  T+ 
Sbjct: 267 INAYLPKASRGPKTAPLIVQNTSEPTFVAVALKNPPLPNTKP 308


>gi|319409433|emb|CBI83082.1| Penicillin-binding protein [Bartonella schoenbuchensis R1]
          Length = 357

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 116/310 (37%), Positives = 183/310 (59%), Gaps = 9/310 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MRQ L  + ++ + ++   L++A       +  +D  TG ++  N     W PASLTKLM
Sbjct: 1   MRQLLYSLCLSFILSMTSTLALAYP-----FISVDAATGRILQHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T YV+F  +   +      ITISKNAS+  PS+S ++ GS +TL+ AL + +VKSAND+A
Sbjct: 56  TTYVIFRAMSTGEISPQKHITISKNASQASPSHSGYEAGSILTLETALSITLVKSANDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A++E++  +++ FVQ MN  ++ LG+  THF NA G+    +YTTARD+A+L+ +I+ +
Sbjct: 116 IALSEAVSGSQEAFVQQMNVQAQRLGMFGTHFANASGLPHPDNYTTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    +    N+N  +  F G DGMKTGFTCASGFN+VASA +  ++
Sbjct: 176 FPQYAHYFSIPAIDFGDGRKIKFNSNNLINRFYGTDGMKTGFTCASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IAV+LG    N R   +A LL  GF  +   +     +K +  +    ++ ++ E++C 
Sbjct: 236 IIAVVLGLDTINAREGKAAQLLETGFSLQGSAQSTLATLKPYGTKMT--QITDMEEQICD 293

Query: 299 TQKEIINYNT 308
            +        
Sbjct: 294 PEVVKKRIED 303


>gi|222147779|ref|YP_002548736.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           [Agrobacterium vitis S4]
 gi|221734767|gb|ACM35730.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           [Agrobacterium vitis S4]
          Length = 442

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L+ +++ +  ++                LLD  TG VIA    D P +PASLTK+M
Sbjct: 1   MSRTLIALSLFVSISMMAS----PVLAGSAQLLLDARTGRVIASENADMPNHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+VF  ++       +P+  SK AS  PP+    K G  +T+  A+  ++  SAND A
Sbjct: 57  TIYMVFDAIRRGTLSWDSPVPFSKYASSRPPTKLRLKPGEEITVREAVLGMVTLSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE L  TE+ F   M   ++ LG+  T F+NA G+      TTARDM+ L   +  D
Sbjct: 117 AAMAEKLGGTEENFAAMMTAKARQLGMPNTTFVNASGLPDDRQITTARDMSTLGVALLRD 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F  +    +G+     N  +  + G DG+KTG+T ASG+N+V++   G + +I
Sbjct: 177 FPRDYALFSTRSFAFRGRTINGHNNLMYRYKGMDGIKTGYTNASGYNLVSAVADGKRRVI 236

Query: 241 AVILGALDRNTRNKVSASLL 260
            VI+G     +R+ + A L+
Sbjct: 237 GVIMGGRSGASRDNLMAQLI 256


>gi|291482380|dbj|BAI83455.1| penicillin-binding protein 5 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 443

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/375 (19%), Positives = 143/375 (38%), Gaps = 40/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M   ++ +A+  L+ +    +             +++ ++G ++     D     AS+TK
Sbjct: 11  MSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTK 70

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           +MT Y++   + + K            + + + +   SN   +K    T+    +   + 
Sbjct: 71  MMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIY 130

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY---------- 164
           SAN  A+AIAE +  +E KFV+ MN  +K LGL+   F+NA G+     +          
Sbjct: 131 SANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVN 190

Query: 165 ----TTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA------VGT 209
                +A+DMAIL+  + TD+P+ +    I   + +         PN N+          
Sbjct: 191 EESEVSAKDMAILADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYK 250

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFYNK 267
               DG+KTG T ++G     +A +    +I V+L A       R   +  +    F N 
Sbjct: 251 KATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLYAKGNLHTGRFDETKKMFDYAFDNF 310

Query: 268 TDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + ++      +          +          ++      K     N + K   +K++  
Sbjct: 311 SMKEIYAEGDQVKGHKTVSVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLT 370

Query: 321 IDFEKITLLKNKITK 335
              +K T +     +
Sbjct: 371 APVKKGTKVGKLTAE 385


>gi|304387808|ref|ZP_07369982.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Neisseria
           meningitidis ATCC 13091]
 gi|304338073|gb|EFM04209.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Neisseria
           meningitidis ATCC 13091]
          Length = 389

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 137/352 (38%), Gaps = 25/352 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENYP 47
           + L ++   +L       +                        + ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNRPTAHAAPTLQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    +   T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPESAWASEGSRMFVRPCDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A+LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+     R   ++ LL+         K           Q   
Sbjct: 245 NLAVSYTGNGRHILVITLGSESAEIRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|219854143|ref|YP_002471265.1| hypothetical protein CKR_0800 [Clostridium kluyveri NBRC 12016]
 gi|219567867|dbj|BAH05851.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 415

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 135/332 (40%), Gaps = 23/332 (6%)

Query: 1   MRQFLVIIAMAMLSN-IFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +  I   ++   I P+   A     +       +LD  TG V+    PD  + PAS
Sbjct: 9   MKKIVTFILFFLIICYINPYNVYATQTLPSVSADSAVILDATTGEVLYAKNPDSAYPPAS 68

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +           L   +T+ KN      +     +G  +T+ + L  L++ S
Sbjct: 69  TTKIMTALLTLENT-----NLNDKVTVGKNPPLVDGTRIGLYEGEELTVKDLLYGLLLAS 123

Query: 116 ANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           AND A A+AE +   + +KF   MN  +  LG   T+F+N  G+    H T+A+D+A++ 
Sbjct: 124 ANDCAEALAEHIGNGSSEKFAIEMNKKAHELGAYNTNFVNPSGLFDEKHKTSAKDLALIM 183

Query: 175 WRIKTDFPQY------MHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCA 223
             +  +           +         K +   N N      +   + G +G KTG+T  
Sbjct: 184 KELCKNPEYSKIATTLYYTIPPTNKSPKERGVWNENKLIQPNSTYYYSGCEGGKTGYTTQ 243

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S  + V++A +  Q LI  ++   ++ T    S SL + GF N +  K  +         
Sbjct: 244 SLHSYVSAATRNGQRLIVALVHDKNK-TFFPDSISLFNFGFDNFSLVKLYSKGDLVTTYN 302

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
             +  VP  +       K   +        K+
Sbjct: 303 KNNISVPLTAASDFYYVKNKDDAAVPSFTLKN 334


>gi|288556011|ref|YP_003427946.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudofirmus OF4]
 gi|288547171|gb|ADC51054.1| D-alanyl-D-alanine carboxypeptidase (serine) [Bacillus pseudofirmus
           OF4]
          Length = 382

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 30/356 (8%)

Query: 1   MRQFLVI--IAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +VI  I   +  +I P +   +   +       +++  +G ++           AS
Sbjct: 2   MKKTVVIGLIFFLLSFSIAPQIEVEARNFSVSAEAAIMMEQESGRILYAKNDQTSLRIAS 61

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     +   + IS NA     S+   + G +M L++ +  L+++S
Sbjct: 62  ITKIMTALLAIESGK-----MQEQVKISTNAEGTEGSSIYLRAGESMLLEDLVYGLMLRS 116

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILS 174
            ND AVAIAE +  + + FV  MN  ++ LG++ T F N HG+  H  HY++A DMA+L+
Sbjct: 117 GNDAAVAIAEHVGGSLEGFVYLMNEKARELGMNQTQFQNPHGLDDHEDHYSSAYDMALLT 176

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKK---YPNTNWAVGT-FLGADGMKTGFTCASGFNIVA 230
                + P Y      K   + G +   + N N  +   +  + G KTGFT  +   +V+
Sbjct: 177 RY-AMESPLYQEISSAKTHRVDGDQIRVWHNKNRLLTELYEYSTGGKTGFTKRARRTLVS 235

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---------IKDFY 281
           +A + D  LI V L A           +L +  F + +    +             KD  
Sbjct: 236 TASKDDLDLIVVTLNAPSD---WHDHMNLFNWAFDSFSLETLVEEGMFKDIKDEFYKDHV 292

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL--LKNKITK 335
               + E P +  E    Q+++  Y    +E +D+        K+ +     KI +
Sbjct: 293 FSPYTFEYPLLGSEKEMVQQKVTLYRPPTEEERDQYVPPHPVGKVDITLSGEKIGQ 348


>gi|241204910|ref|YP_002976006.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240858800|gb|ACS56467.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 292

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 136/261 (52%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS++F   +           ++D  +G V+  +  D    PASLTK+M
Sbjct: 2   MTKTTSRLLATALSSVFLMGAFTLAQAGQASFVVDVQSGQVLEGSNQDDLNYPASLTKMM 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 62  TLYLAFEALHDGRLNWDQKLTMSENAESKEPFKLAVGAGRKVTLREAVEGIVVLSANDAA 121

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + +  LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 122 VAIAEQLGGSEQVFAKAMTDKAHQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 181

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++  + ++
Sbjct: 182 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKDGRRVV 241

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G    + R+   ASLL 
Sbjct: 242 GVVMGEKTASIRDDKMASLLD 262


>gi|167922874|ref|ZP_02509965.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei BCC215]
          Length = 315

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 9/268 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A   +S      + A   +   + ++D ++G  +  +  D    PASLTKLMTAYV F
Sbjct: 28  LFAALFVSAACAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTKLMTAYVAF 87

Query: 67  SFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             L+         +T++ +                G  + + + ++ LIV SAND A+ +
Sbjct: 88  DALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVASANDAALVL 147

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ R+  DFP 
Sbjct: 148 AKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQRLNRDFPA 207

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI------QGDQ 237
           +  +   +          N N  +G     DGMKTG T A+G+ +V +A       +   
Sbjct: 208 FYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRPVGGARARH 267

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFY 265
            +IAV+LG      R   + +LL  GF 
Sbjct: 268 RVIAVLLGEPTEKQRLADARALLDQGFA 295


>gi|328541732|ref|YP_004301841.1| D-alanyl-D-alanine carboxypeptidase family [polymorphum gilvum
           SL003B-26A1]
 gi|326411484|gb|ADZ68547.1| D-alanyl-D-alanine carboxypeptidase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 458

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 148/262 (56%), Gaps = 3/262 (1%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            ++  +L   F     A   +     + ++D ++G V+ E      W PASLTK+MTAYV
Sbjct: 10  ALSFGVLIAAFLAAVQAPPARADIGSWIVIDADSGQVLDEFQGTRRWYPASLTKMMTAYV 69

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
               ++E ++ L + +T S+N+   PPS   FK G+ MT+D ALK+++VKSANDIAVA+ 
Sbjct: 70  TLKAIREGRSSLDSAVTQSQNSLAQPPSKMGFKVGTQMTVDTALKIVMVKSANDIAVALG 129

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E++  TE  FV  MN  +  LG+  THF N HG+  +   ++A DMAIL+  ++ DFP+ 
Sbjct: 130 EAIGGTEANFVALMNAEAARLGMRDTHFANPHGLPDNRQVSSALDMAILARALRRDFPEA 189

Query: 185 MHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             Y+   GL    +   + N        GADGMKTG+ C SG+N+ ASA +  +++IAV+
Sbjct: 190 RGYYGHAGLTFGKQTLRSANREFLLRVPGADGMKTGYICNSGYNVAASATRRGRTVIAVV 249

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           LGA     R   +   +  GF 
Sbjct: 250 LGASSGLERTAFAREAIDKGFR 271


>gi|218666016|ref|YP_002426742.1| D-alanyl-D-alanine carboxypeptidase, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518229|gb|ACK78815.1| D-alanyl-D-alanine carboxypeptidase, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 323

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 122/269 (45%), Gaps = 7/269 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           LV I +  +       S         Y L++ +TG +IA      P+  AS+TKLMT Y+
Sbjct: 39  LVAIFLFCIPRAEAETSGLPPIDARAYILMNADTGAIIATKNAYRPYAIASITKLMTLYL 98

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  +      L       + A +   S+     G   T+   +  + V S ND AV  A
Sbjct: 99  LFKDIDSGHLQLNQHFVPCRAALQTGGSSMFMHPGMPFTIAQLILGMTVPSGNDAAVETA 158

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
             +  +   FV  MN T++ +G+ +T F +  G+    +  +  D+A+L+  + T FPQ+
Sbjct: 159 HLVAGSVPAFVAEMNRTARKIGMLSTTFYDPDGLPHPNNMASPYDVAVLTRTLMTQFPQF 218

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           M +F+ +     G   PN N  VG      GMK+G+T A+G  +VA+  Q   SLIAVIL
Sbjct: 219 MPFFRHENFTYAGITSPNPNLLVGRVPFITGMKSGYTDAAGHCLVATGTQNGISLIAVIL 278

Query: 245 GALD--RNTR-----NKVSASLLSMGFYN 266
           G        R     +  S  LL  GF  
Sbjct: 279 GVPSFRDEGRGFWRASWQSLKLLDWGFAR 307


>gi|255029224|ref|ZP_05301175.1| hypothetical protein LmonL_09016 [Listeria monocytogenes LO28]
          Length = 432

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 77/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 4   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 63

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 64  LEAIDKGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 124 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 183

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 184 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 243

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 244 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 303

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 304 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNAPKLNTKVTMKEKTIEAPVK 362

Query: 325 KITLLKN 331
           K T +  
Sbjct: 363 KGTEVGK 369


>gi|150397770|ref|YP_001328237.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
 gi|150029285|gb|ABR61402.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium medicae
           WSM419]
          Length = 376

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 116/308 (37%), Positives = 176/308 (57%), Gaps = 9/308 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
               L+ + P  +           ++D +T  V         W PASLTKLMTAY+ F  
Sbjct: 22  CAIFLAAVLPASANPR-------LVIDVDTLKVYEHQDIFQKWYPASLTKLMTAYITFRA 74

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +K  +  L +P+ ++KNA+  PPS   +K G  MTLD+ALK+++VKSAND+AVAIAE++ 
Sbjct: 75  IKADQLTLESPVVMTKNAASEPPSKMFYKPGQKMTLDSALKMMLVKSANDVAVAIAETVG 134

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            TE+ F++ MN  ++ +G++++ F+N HG+   G YTTARD+A+L+  +K +FPQY  YF
Sbjct: 135 GTEQAFIERMNAEARRIGMTSSRFINPHGLPGEGQYTTARDLAVLAVTLKREFPQYASYF 194

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            ++G     K YPN N  +G F GADGMKTGF CASGFN V+SA++  + +++V+LG   
Sbjct: 195 ALEGFTTGKKDYPNYNMLIGRFEGADGMKTGFICASGFNQVSSAVRSGRRVVSVVLGEDS 254

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              R   SA LL          K     I  + +      V ++S E+C+ Q   +    
Sbjct: 255 LGARADESARLLQKALTTVATDKPSLAEIPPYGE--SREVVADVSREICSKQAAKVRSEG 312

Query: 309 QMKEAKDK 316
           + +  + K
Sbjct: 313 RDEAGRQK 320


>gi|253682546|ref|ZP_04863343.1| D-alanyl-D-alanine carboxypeptidase DacF [Clostridium botulinum D
           str. 1873]
 gi|253562258|gb|EES91710.1| D-alanyl-D-alanine carboxypeptidase DacF [Clostridium botulinum D
           str. 1873]
          Length = 391

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 79/331 (23%), Positives = 150/331 (45%), Gaps = 14/331 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            L ++ ++ +  +    +      +     L++ +TG +I +      + PAS+TK+MT 
Sbjct: 12  LLAVLFISQIFVVNVKAAEGSLDVEAKAGLLMEPSTGKIIYKKNVHEKFAPASVTKIMTM 71

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDI 119
            +    +   K  L+  + +S+NA +   +   +     G   T+++ LK + + S ND 
Sbjct: 72  LLTMEAIDSGKIKLSDTVVVSENAKKMGKNGSSSMLLDTGEVRTVEDLLKGVAIASGNDA 131

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A+AE +  +E +FV+ MN  ++ LG+  T F N HG+ + GH T+A D++I+S  +  
Sbjct: 132 ATALAEYIGGSESRFVEMMNKRAQQLGMKDTTFKNCHGLSKEGHLTSAYDISIMSCELLK 191

Query: 180 DF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                     +   I        +  N N  V  + G DG+KTGFT  + + I A+A++ 
Sbjct: 192 HKKILKYSGTYMETISEGRKNPIELVNHNKLVRFYKGCDGLKTGFTNEAKYCISATAVRN 251

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK------INYIIKDFYQQNLSNEV 289
           +  ++A+I+GA     RN+ ++ L++ GF     +K       +  II D   +      
Sbjct: 252 NIRMLAIIVGAPTYKVRNRDASMLMNYGFSKFESKKIVTKDSDVEKIILDKKGEKFFFAK 311

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                 V   +        +    KDK+ + 
Sbjct: 312 AKNDLNVVLERGSKNKITKKCVLNKDKKEYK 342


>gi|225174843|ref|ZP_03728840.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225169483|gb|EEG78280.1| Serine-type D-Ala-D-Ala carboxypeptidase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 371

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/323 (21%), Positives = 119/323 (36%), Gaps = 16/323 (4%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                           LLD  TG ++           AS TK+MTA +     +     L
Sbjct: 19  LAVAMETPDVTARAAVLLDQETGRILFSKNAHERLPMASTTKIMTAILAIESGR-----L 73

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
              +T+S+ AS    S      G   TL+  L  L+++S ND A AIAE L  + +KF +
Sbjct: 74  DEMVTVSEYASLVEGSGVDLDAGEQKTLEELLYGLMLRSGNDAATAIAEHLAGSVEKFAR 133

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD--MAILSWRIKTDFPQYMHYFQIKGLE 194
            M   +  LG + T F N HG+    HYTTA D  +  +      +F + +   + +   
Sbjct: 134 QMTRRAGELGAAQTRFENPHGLEAENHYTTAYDLGIIAVYAMSLPEFREVVATSEKRISW 193

Query: 195 IKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     N N  +  +  ADG+KTG+T  +G   V S+ +    L++V+L A     
Sbjct: 194 TGRPYDRILYNQNKLLDMYEYADGIKTGWTTPAGRCFVGSSNKDGWGLVSVVLNAP---Q 250

Query: 252 RNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             + +  L+  G+        +           ++  ++ V  ++        +    + 
Sbjct: 251 MWEDTIELMEFGYSYYHWEPLVEEGRHLKTAQVERGTADRVTLVAGNDLGLPLKENEADV 310

Query: 309 QMKEAKDKESHFIDFEKITLLKN 331
              E    E           +  
Sbjct: 311 LRYEFNVAEPLRAPVSAGDEVGT 333


>gi|239825594|ref|YP_002948218.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. WCH70]
 gi|239805887|gb|ACS22952.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. WCH70]
          Length = 450

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 81/357 (22%), Positives = 138/357 (38%), Gaps = 34/357 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +    S     +     L+D NTG ++ +   D     AS+TK+MT Y++   +KEK+
Sbjct: 24  FRVAKAASDPLNIEADAAILVDANTGRILYQKNIDTVLGIASMTKMMTEYLLLEAIKEKR 83

Query: 74  AMLTTPITISKNASE----YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                  T S            SN   +K    T+    + + + SAN   VAIAE +  
Sbjct: 84  VKWDQQYTPSDYVYRLSQDRSLSNVPLRKDEKYTVRELYEAMAIYSANAATVAIAEIVGG 143

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSW 175
           +E+ FV+ MN  +K LGL    F+N+ G+                  +  +AR +A L++
Sbjct: 144 SEQNFVKMMNEKAKQLGLKGYKFVNSTGLSNEDLKGFHPEGTNEREENVMSARSVATLAY 203

Query: 176 RIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFTCASGF 226
            +  ++P+ +          +       K  N NW     V  + G DG+KTG+T  +G+
Sbjct: 204 HLLKEYPEVLETASTPRKIFREGTDDQIKMDNWNWMLPGLVREYEGVDGLKTGYTEFAGY 263

Query: 227 NIVASAIQGDQSLIAVILGALDR-----NTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
               +A +     I V++ A          R + +  LL  GF N + +K      +   
Sbjct: 264 CFTGTAERDGVRFITVVMNAKSNGKSTIEARFEQTEKLLHYGFSNYSIKKLYPKGYQLKG 323

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI--TKK 336
           +  L             T K         +E   +  +  D +K+T     +   KK
Sbjct: 324 KSTLPVVKGKEKSVAIVTDKPFFLVVKNGEEKNYRPVYVFDQKKLTDKGELVAPIKK 380


>gi|86749513|ref|YP_486009.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris HaA2]
 gi|86572541|gb|ABD07098.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris HaA2]
          Length = 573

 Score =  170 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 91/302 (30%), Positives = 157/302 (51%), Gaps = 1/302 (0%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D NTG  ++   PD   +PASLTK+MT Y++F  L+  K  L + + +S +A
Sbjct: 51  PAFASIIVDANTGATLSATNPDAVRHPASLTKIMTLYLLFERLEAGKLSLDSEMEVSAHA 110

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           S   P+    + G T+ +++A+K L+ +SAND AV IAE++  +E +F + M   ++ LG
Sbjct: 111 SSQAPTKLGLRPGQTLRVEDAIKALVTRSANDAAVVIAETVGGSEAEFARMMTRKARALG 170

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T + N++G+      TTARD +IL   I+  FP+Y  YF       +G    N N  
Sbjct: 171 MSRTVYRNSNGLPNDDQVTTARDQSILGRAIQDRFPRYYRYFATTTFNYRGASIRNHNRL 230

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G   G DG+KTG+T ASGFN+V S  +G++ L+ V+LG     +R+ +  +LL+     
Sbjct: 231 LGNVEGVDGIKTGYTRASGFNLVTSMHRGNRFLVGVVLGGRSGGSRDAIMRNLLAENLEK 290

Query: 267 KTDRKKINYIIK-DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
              R+ +  I++       ++ ++P+         +  +   +   E  +  +       
Sbjct: 291 GATRRTVAAIVERSPSSTQVAEDMPDSRPSPTVQVQGAVQVASAAPEPIETVARPAPPAP 350

Query: 326 IT 327
           IT
Sbjct: 351 IT 352


>gi|198284088|ref|YP_002220409.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248609|gb|ACH84202.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 317

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 122/269 (45%), Gaps = 7/269 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           LV I +  +       S         Y L++ +TG +IA      P+  AS+TKLMT Y+
Sbjct: 33  LVAIFLFCIPRAEAETSGLPPIDARAYILMNADTGAIIATKNAYRPYAIASITKLMTLYL 92

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  +      L       + A +   S+     G   T+   +  + V S ND AV  A
Sbjct: 93  LFKDIDSGHLQLNQHFVPCRAALQTGGSSMFMHPGMPFTIAQLILGMTVPSGNDAAVETA 152

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
             +  +   FV  MN T++ +G+ +T F +  G+    +  +  D+A+L+  + T FPQ+
Sbjct: 153 HLVAGSVPAFVAEMNRTARKIGMLSTTFYDPDGLPHPNNMASPYDVAVLTRTLMTQFPQF 212

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           M +F+ +     G   PN N  VG      GMK+G+T A+G  +VA+  Q   SLIAVIL
Sbjct: 213 MPFFRHENFTYAGITSPNPNLLVGRVPFITGMKSGYTDAAGHCLVATGTQNGISLIAVIL 272

Query: 245 GALD--RNTR-----NKVSASLLSMGFYN 266
           G        R     +  S  LL  GF  
Sbjct: 273 GVPSFRDEGRGFWRASWQSLKLLDWGFAR 301


>gi|190892030|ref|YP_001978572.1| D-alanyl-D-alanine carboxypeptidase [Rhizobium etli CIAT 652]
 gi|218516887|ref|ZP_03513727.1| probable D-alanyl-D-alanine carboxypeptidase protein [Rhizobium
           etli 8C-3]
 gi|190697309|gb|ACE91394.1| probable D-alanyl-D-alanine carboxypeptidase protein [Rhizobium
           etli CIAT 652]
          Length = 290

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 135/261 (51%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+       A+        ++D  +G V+  +  D    PASLTK+M
Sbjct: 1   MTKMTSRLRATALSSALLISGFAQAEAGQASFVVDAQSGQVLEASNQDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHQGRLTWEQKLTMSENAESKEPFKLAIGAGRQVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + ++ LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 121 VAIAEQLGGSEQAFAKAMTDKARQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++G + ++
Sbjct: 181 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKGGRRVV 240

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G      R+   A LL 
Sbjct: 241 GVVMGEKTAGLRDDKMAGLLD 261


>gi|254824881|ref|ZP_05229882.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J1-194]
 gi|293594121|gb|EFG01882.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J1-194]
          Length = 445

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLNTKVTMKEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|290891934|ref|ZP_06554931.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J2-071]
 gi|290558528|gb|EFD92045.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J2-071]
          Length = 433

 Score =  170 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 139/367 (37%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+N+ G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKAEELKLGEHQFVNSTGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRQGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVITVVLHANGEAPGAHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK---------ESHFIDFE 324
               K     +         + V    K+ +       +   K         ++     +
Sbjct: 305 KAGSK-VKNPSTIAVDKGKEDTVGLVTKDAVKLVVSKNDNSPKLNTNVKLEEKTIEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KGTEVGE 370


>gi|254851941|ref|ZP_05241289.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           R2-503]
 gi|254994152|ref|ZP_05276342.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J2-064]
 gi|255520022|ref|ZP_05387259.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J1-175]
 gi|300763487|ref|ZP_07073485.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           N1-017]
 gi|258605239|gb|EEW17847.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           R2-503]
 gi|300515764|gb|EFK42813.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           N1-017]
          Length = 445

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLNTKVTMKEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|167582899|ref|ZP_02375773.1| family S11 unassigned peptidase [Burkholderia thailandensis TXDOH]
          Length = 333

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++             + A   +   + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGAQAAPAQAPGIQAVSWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERAALRWDETVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATLMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFSKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 IGGARAPHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|254472440|ref|ZP_05085840.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Pseudovibrio
           sp. JE062]
 gi|211958723|gb|EEA93923.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Pseudovibrio
           sp. JE062]
          Length = 447

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 103/267 (38%), Positives = 156/267 (58%), Gaps = 6/267 (2%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +FL + A+A+ S +    +      +  + L+D + G V+  N     W PASLTK+MTA
Sbjct: 13  RFLAVFAVALGSLLSTARA-----DIAAWLLMDADNGQVLEHNAAFDRWYPASLTKMMTA 67

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           YV F  +      ++  + +S+NA   PPS   FK G+T+TLDNALK+++VKSANDIAVA
Sbjct: 68  YVAFQHISRGDMAMSDMVMVSQNALNQPPSKMGFKVGTTITLDNALKMILVKSANDIAVA 127

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  TE+ F+  MN  ++ +G+  T+F+N HG+  +   TTARDMAIL+  +   FP
Sbjct: 128 VAERVGGTEENFITMMNANARRMGMLHTNFVNPHGLPDNRQVTTARDMAILARELWNKFP 187

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           QY  Y    G+    + + + N        GA+GMKTG+ C SGFN+  SA +  +++IA
Sbjct: 188 QYRSYMSHPGIRFGRRTFRSGNRDFLLRTAGANGMKTGYICNSGFNVATSATRNGRTVIA 247

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKT 268
           ++LGA     R+  +  L+  GF   T
Sbjct: 248 IVLGAASSLERSAFAKKLIDSGFKKTT 274


>gi|254804742|ref|YP_003082963.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha14]
 gi|254668284|emb|CBA05194.1| putative D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha14]
          Length = 389

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/352 (21%), Positives = 137/352 (38%), Gaps = 25/352 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENYP 47
           + L ++   +L       +                        + ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNRPTVHAAPTLQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T+  D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVGTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A+LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+     R   ++ LL+         K           Q   
Sbjct: 245 NLAVSYTGNGRHILVITLGSESAEIRASDNSKLLNWALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|326791358|ref|YP_004309179.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
 gi|326542122|gb|ADZ83981.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
          Length = 382

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 75/351 (21%), Positives = 135/351 (38%), Gaps = 25/351 (7%)

Query: 1   MRQFLVIIAMA----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ +++  +     ++S++    S     +     L++  +G V+ E     P   AS 
Sbjct: 1   MKKKIILSFILIGSMLVSSLCYANSELPKVRAKGAVLIEQESGRVLYEKNGYEPLAMAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT  +           L   +TISK AS  PP     K G    L + L  L+++S 
Sbjct: 61  TKIMTCILAIEK-----GNLLDVVTISKRASSAPPVKLHLKVGEKQRLGDLLYALMLQSD 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND AVA+AE +  + + F + M   +K +G   T F   +G+   GHY +A DM ++   
Sbjct: 116 NDAAVAVAEHIAGSVEAFCEQMTEKAKEIGAEHTSFKTPNGLDAEGHYASAYDMTLIGAY 175

Query: 177 IKTDFPQYM-------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
              +                I           N N    ++ GA+G+KTGFT  +G   V
Sbjct: 176 ALKNPEFVKIITTATIQIPTIPTEGSHTYGLQNKNRFFYSYEGANGIKTGFTNKAGHCFV 235

Query: 230 ASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
            +A + D  LI   LG+      +  +     ++++ GF        +            
Sbjct: 236 GAAYKNDMQLIGAALGSGWGKAGKTQKYTDVINMMNYGFKYYKKYTLVEPQRNIAKVAIE 295

Query: 286 SNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + ++S +    +     E+   N  +K+            K  ++   
Sbjct: 296 KALIESLSLDCDETIILPLTEVEKANVYIKKV-VPTQLVAPVHKRDIIGEV 345


>gi|331269461|ref|YP_004395953.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum
           BKT015925]
 gi|329126011|gb|AEB75956.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum
           BKT015925]
          Length = 379

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 79/349 (22%), Positives = 155/349 (44%), Gaps = 18/349 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           + I+ ++ +  +    +      +     L++ +TG V+ E      + PAS+TK+MT  
Sbjct: 1   MAILFISQICVVNVKAAEGSLDVEAKAGILMEPSTGKVVFEKNVHEKFAPASVTKIMTML 60

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +    +   K  LT  + +S+NA +   +   +     G   T+++ LK + + S ND A
Sbjct: 61  LTMEAIDSGKIKLTDTVVVSENAKKMGKNGSSSMLLDTGEVRTVEDLLKGVAIASGNDAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +  +E  FV+ MN  ++ LG+  T F N HG+ + GH T+A D++I+S  +   
Sbjct: 121 TALAEYIGGSESSFVEMMNKRAQQLGMKDTTFKNCHGLSKEGHLTSAYDISIMSRELLKH 180

Query: 181 F----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
                    +   I     K  +  N N  V  + G DG+KTGFT  + + I A+A++ +
Sbjct: 181 KKILKYSGTYMETISEGRKKPIELVNHNKLVRFYKGCDGLKTGFTNEAKYCISATAVRNN 240

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY----QQNLSNEVPNI 292
             ++A+I+GA     RN+ ++ L++ GF     +K +            ++         
Sbjct: 241 IRMLAIIVGAPTYKVRNRDASMLMNYGFSKFESKKIVTKDSDVEKISLDKKGEKFFFAKA 300

Query: 293 SEEVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
             +     +         K      + + K++  I + ++ +    + K
Sbjct: 301 KNDFNVVVERGEKNKITKKCVLNKDKKEYKQNEIIGYCEVYVNDKLLGK 349


>gi|313616580|gb|EFR89415.1| D-alanyl-D-alanine carboxypeptidase DacA [Listeria innocua FSL
           S4-378]
          Length = 433

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   ++    + + + SAN  A+
Sbjct: 65  LEAIDKGQLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYSVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+N+ G+                 +  TAR
Sbjct: 125 AISEKIAGSEKEFVDLMNKKAEELKLGDHQFVNSTGLNNEDLKGGQQVGGPTDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLIDDYPDVLKTASTTKKEFRKGTSDQIDMSNWNWLLPGLIYGRKGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    ++ V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVVTVVLHANGGGKGEHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    +   + ++    K         K    +++     +
Sbjct: 305 KAGSKVKNPSTIAVDKGKEDTVGLITKDAVKLVVP-KNDNEPKLSTKVKLKEKTLEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KNTEVGE 370


>gi|195978797|ref|YP_002124041.1| D-alanyl-D-alanine carboxypeptidase precursor DacA.2 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195975502|gb|ACG63028.1| D-alanyl-D-alanine carboxypeptidase precursor DacA.2 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 411

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 146/365 (40%), Gaps = 31/365 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ +V +A  M       L+   +        ++  TG ++           ASLTKL+
Sbjct: 1   MKKLIVTLAALMCLITNTSLAEDFSVNSRQAIAVEMTTGKILYAKEAQQKAPIASLTKLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V   +K  +    + + +S+ A +    P  ++   +    T+   ++  ++ SAN
Sbjct: 61  TVYLVLKEIKAGRLQWDSQVILSEYALQLATDPDISNPAFEQRPYTIKELVESSLIISAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             AVA+AE +  +E  FV  M    +  G+     +NA G+                  +
Sbjct: 121 SSAVALAEHIAGSEPTFVDMMKKQLEAWGIRDYRLVNASGLNNSMLKGHLYPGSQPDDEN 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
             TARD+A+++ ++  DFP+ +       L+   K  PN+N  +        G DG+KTG
Sbjct: 181 QMTARDLALIAQQLLQDFPEVLTISSQAQLKWGEKDLPNSNLLLAGREMARTGVDGLKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINY 275
            T  +G  ++A+A+Q +  +I+VIL A     D   R   +  LL   F + T  K +  
Sbjct: 241 TTSQAGQTMIATAVQDNMRVISVILHADQSDTDERARFVETNRLLDYCFNSYTLEKLVAQ 300

Query: 276 IIKDFYQQNLSNEVP-----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 +  +            ++ +   + +     +     KDK        +   + 
Sbjct: 301 NQVLPERLIVKQAAKQRLRVKANQSLMVVRPKDQTQLSYSLRIKDKV-LKTPIRQNKKVG 359

Query: 331 NKITK 335
             I +
Sbjct: 360 TLIYQ 364


>gi|217977547|ref|YP_002361694.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocella silvestris
           BL2]
 gi|217502923|gb|ACK50332.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocella silvestris
           BL2]
          Length = 536

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 105/244 (43%), Positives = 154/244 (63%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
           I    +     L+D  +G V+ E++   PW PASLTKLMT YV    +++ +  L TP+ 
Sbjct: 38  IPLRAEAAPSLLMDLASGAVLYEDHATQPWFPASLTKLMTVYVALQAVRDHRISLDTPLV 97

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S+ A+  PPS   F+ G+ +TLD ALK+L+VKSAND++V +AE +  + + F   MN T
Sbjct: 98  VSRRAAAMPPSKMGFRPGTMVTLDTALKILMVKSANDVSVTVAEGVSGSVEAFAAEMNAT 157

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +  LG+  +HF+N +G+    HY++ARD+A+L+  +   FP++   F I  LEI G+   
Sbjct: 158 AAALGMQQSHFVNPNGLPDPQHYSSARDLALLARALYVTFPEHADLFSIGALEIGGRVMA 217

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           N N  +G + G DGMKTGFTCA+GFN+VASA QG + L+AVILGA +   R   +A+L  
Sbjct: 218 NHNNLLGRYPGVDGMKTGFTCAAGFNVVASATQGGRKLVAVILGAPNVALRTVKAAALFD 277

Query: 262 MGFY 265
            GF 
Sbjct: 278 RGFA 281


>gi|168179469|ref|ZP_02614133.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum NCTC 2916]
 gi|182669511|gb|EDT81487.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum NCTC 2916]
          Length = 415

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 78/348 (22%), Positives = 142/348 (40%), Gaps = 25/348 (7%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     ++ ++ + S  F  +++A+              L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFCKILCSILLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  + + F + MN  +K LG + T+F+N  G+    H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLENFSKDMNKRAKELGCTNTNFVNPSGLYNDKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKNNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|47095562|ref|ZP_00233170.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes str.
           1/2a F6854]
 gi|47015992|gb|EAL06917.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes str.
           1/2a F6854]
          Length = 433

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 77/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 185 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 245 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 304

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 305 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNAPKLNTKVTMKEKTIEAPVK 363

Query: 325 KITLLKN 331
           K T +  
Sbjct: 364 KGTEVGK 370


>gi|167630369|ref|YP_001680868.1| d-alanyl-d-alanine carboxypeptidase [Heliobacterium modesticaldum
           Ice1]
 gi|167593109|gb|ABZ84857.1| d-alanyl-d-alanine carboxypeptidase [Heliobacterium modesticaldum
           Ice1]
          Length = 259

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 12/265 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  +L       S +         L+D  TG ++ E     P  PAS TK++TA + 
Sbjct: 1   MCLSPFLLLGGPALCSASPQVTADAAVLMDAETGRILFERQAHQPRPPASTTKIVTALLG 60

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F         L   + IS+ A     ++     G  + L + L   +V+S ND  VAIAE
Sbjct: 61  FE-----FGDLEDEVIISQKAGSTGEASINLFPGERVALGDLLTGALVRSGNDACVAIAE 115

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +E+ F   M   S+ +G  ++ F N +G+    H+++A D+A+++           
Sbjct: 116 HIAGSEEFFTLWMTAKSRIIGGRSSQFFNTNGLPHKHHWSSAYDLAVVTREAMRRPEFAA 175

Query: 186 HYFQIKGLEIKGKKYP----NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +      + +P    NTN  + ++  ADG+KTG T A+G  +VASA + ++ LIA
Sbjct: 176 TVRSRRATLKNRQGWPKEIKNTNALLWSYPFADGVKTGTTRAAGACLVASATKNNRQLIA 235

Query: 242 VILGALDRNTRNKVSASLLSMGFYN 266
           V+L + D   R   S  L   GF  
Sbjct: 236 VVLHSDD---RFGDSLRLFEYGFNQ 257


>gi|217966043|ref|YP_002351721.1| D-alanyl-D-alanine carboxypeptidase DacA (DD-peptidase)
           (DD-carboxypeptidase) (CPase) (Penicillin-binding
           protein5) (PBP-5) [Listeria monocytogenes HCC23]
 gi|217335313|gb|ACK41107.1| D-alanyl-D-alanine carboxypeptidase DacA (DD-peptidase)
           (DD-carboxypeptidase) (CPase) (Penicillin-binding
           protein5) (PBP-5) [Listeria monocytogenes HCC23]
          Length = 445

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 143/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+N+ G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKAEELKLGEHQFVNSTGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRQGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGEAPGAHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K   +         ++++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNDNSPKLNTNVKLEEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|226225306|ref|YP_002759413.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Listeria monocytogenes Clip81459]
 gi|225877768|emb|CAS06483.1| Putative D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein 5) [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|328468231|gb|EGF39237.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes 1816]
          Length = 445

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLNTKVTMKEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|319404375|emb|CBI77978.1| penicillin-binding protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 449

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 5/311 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++  + + + ++   +   +  E         ++D NTG  + +        PASLTK+M
Sbjct: 13  KKVGIALTVLVIFCSWAIATPKEAYPDKYAAIVIDANTGKTLFQANATLKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  +K  +    TPI IS  A+  PP+    K G T++++ A K LI KSAND+A
Sbjct: 73  TVYMIFEAIKNGRVTPNTPIPISNYAATRPPTKIGIKAGQTISIEAATKALITKSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI E L  +E+KF Q M   ++ LG+  THF NA G+    +Y+TA+DMA L+  ++  
Sbjct: 133 TAIGEYLGGSEQKFAQMMTIKARTLGMKNTHFANASGLPDTRNYSTAQDMATLALALRRH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F+      +G+   N N  + T  G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPEQYKLFKTTHFTFRGQTINNHNTLIKTIKGVDGIKTGYTQMSGSNLATSMRINGRSVV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV++G    NTRN   A+LL         +       +              +  +  T+
Sbjct: 253 AVVMGGKSSNTRNIHMANLL----KQYLPKASRVESNEHLVATARYKLPTGAATPIPLTK 308

Query: 301 KEIINYNTQMK 311
             +IN + ++ 
Sbjct: 309 NNLINSDDEIS 319


>gi|225867885|ref|YP_002743833.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701161|emb|CAW98054.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus equi
           subsp. zooepidemicus]
          Length = 411

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 75/365 (20%), Positives = 146/365 (40%), Gaps = 31/365 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ +V +A  M       L+   +        ++  TG ++           ASLTKL+
Sbjct: 1   MKKLIVTLAALMCLITNTSLAEDFSVNSRQAIAVEMTTGKILYAKEAQQKAPIASLTKLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V   +K  +    + + +S+ A +    P  ++   +    T+   ++  ++ SAN
Sbjct: 61  TVYLVLKEIKAGRLQWDSQVILSEYALQLATDPDISNPAFEQRPYTIKELVESSLIISAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             AVA+AE +  +E  FV  M    +  G+     +NA G+                  +
Sbjct: 121 SSAVALAEHIAGSEPTFVDMMKKQLEAWGIRDYRLVNASGLNNSMLKGHLYPGSQPDDEN 180

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
             TARD+A+++ ++  DFP+ +       L+   K  P++N  +        G DG+KTG
Sbjct: 181 QMTARDLALIAQQLLQDFPEVLTISSQAQLKWGEKALPSSNLLLAGREMGRAGVDGLKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINY 275
            T  +G  ++ +A+Q +  +I+VIL A     D   R   +  LL   F +    K +  
Sbjct: 241 TTSQAGQTMITTAVQDNMRIISVILHADQSDTDERARFVETNRLLDYCFDSYALEKLVAQ 300

Query: 276 IIKDFYQQNLSNEVP-----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 +  +            S+ +   + +     +     KDK +  +   +   + 
Sbjct: 301 NQVLPERLIVKQAAKQRLRVKASQTLTVVRPKDQTELSYSLRIKDK-ALKVPIRQNKKVG 359

Query: 331 NKITK 335
             I +
Sbjct: 360 TLIYQ 364


>gi|46908941|ref|YP_015330.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|254930973|ref|ZP_05264332.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes
           HPB2262]
 gi|46882214|gb|AAT05507.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|293582519|gb|EFF94551.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes
           HPB2262]
 gi|328469102|gb|EGF40050.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes 220]
 gi|332313185|gb|EGJ26280.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes str.
           Scott A]
          Length = 445

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGQIKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLNTKVTMKEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|220903565|ref|YP_002478877.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219867864|gb|ACL48199.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 378

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 80/250 (32%), Positives = 128/250 (51%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P +      +     L D +   ++ E   D    PASLTK+++ ++    + + K  
Sbjct: 36  AAPPIPEHGFLETSSAILYDLDHDAILFEQNADQRIAPASLTKVLSMFLALDSVDQGKLS 95

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   +T+S+ A+    S    ++   ++L+  L  + V S ND ++A+AE +  +   FV
Sbjct: 96  LDNTVTVSRAAAGTGGSRMGLRENDVVSLEQLLMGMAVSSGNDASMAVAECVGGSTPAFV 155

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++ LG+  + F N HG+   G YTTARDM  L+       PQ + +     +  
Sbjct: 156 AMMNAKAQALGMRDSQFRNPHGLPAKGQYTTARDMLTLARAYLQAHPQALRFHNTHTISH 215

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           KG+   N N  +G + GADG+KTG+  ASG+N++ +A QG + L+AVILGA D  TR   
Sbjct: 216 KGRVTWNKNPLLGQYPGADGLKTGWVNASGYNLIFTASQGPRRLLAVILGAPDSRTRGVE 275

Query: 256 SASLLSMGFY 265
           +  LL  GF 
Sbjct: 276 AFRLLDAGFQ 285


>gi|218513170|ref|ZP_03510010.1| probable serine-type D-Ala-D-Ala carboxypeptidase protein
           [Rhizobium etli 8C-3]
          Length = 325

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 82/253 (32%), Positives = 133/253 (52%), Gaps = 1/253 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               +  +    + AE     Y   ++D  TG+V+     D    PASLTK+MT Y+ F 
Sbjct: 1   MAVTVVLVDSVNAEAEAANPKYAGIVVDAKTGNVLYSENADRLQYPASLTKMMTLYMTFE 60

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A A+ E L
Sbjct: 61  ALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAATALGEML 120

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E +F Q M   +  LG++ T + NA+G+      TTARD A L   ++  FPQY  Y
Sbjct: 121 GGSEDRFAQMMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQYYGY 180

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S+++V+LG  
Sbjct: 181 FSTRAFKFGTRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSIVSVVLGGT 240

Query: 248 DRNTRNKVSASLL 260
               R+    +L+
Sbjct: 241 SGPARDAQMRNLI 253


>gi|209884896|ref|YP_002288753.1| serine-type D-Ala-D-Ala carboxypeptidase [Oligotropha
           carboxidovorans OM5]
 gi|209873092|gb|ACI92888.1| serine-type D-Ala-D-Ala carboxypeptidase [Oligotropha
           carboxidovorans OM5]
          Length = 587

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 81/279 (29%), Positives = 146/279 (52%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  +     D   +PASLTK+MT Y++F  ++  K  L + + +S++AS  
Sbjct: 55  ASIIVDANSGATLQSTNADATRHPASLTKIMTLYMLFEQIENGKLRLDSQLEVSRHASAQ 114

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G T+ +++A+K ++ +SAND +V +AE++  +E+ F + M   ++ LG++ 
Sbjct: 115 APTKLGLRPGQTIRVEDAIKGIVTRSANDASVVVAEAIAGSEEGFAKMMTRKARALGMNN 174

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T ++NA G+      TTARD A L   I+  FP+Y  YF       +G+   N N  +G 
Sbjct: 175 TTYVNASGLPDSDQITTARDQATLGRAIQDRFPKYYRYFSTSVFTWRGRPIRNHNHLLGR 234

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+  ASGFN+V++  +G++ L+ V+LG      R+     LL+    + + 
Sbjct: 235 VEGVDGIKTGYIRASGFNLVSNIRRGNRHLVGVVLGGRTSGARDATMRKLLATYLDDAST 294

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
           R+ +  I +         ++        + +   I   T
Sbjct: 295 RRTVAAITERTPAGTTPAKMEQPVAAKPSPRPAPIQVAT 333


>gi|170755725|ref|YP_001782612.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120937|gb|ACA44773.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 415

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 137/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSILLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG + T+F+N  G+    H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFPKDMNKRAKELGCTNTNFVNPSGLYNDKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKNNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|315646383|ref|ZP_07899501.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           vortex V453]
 gi|315278026|gb|EFU41346.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           vortex V453]
          Length = 394

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 13/293 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   +  + + +   ++        N      L+D  +G ++     D     ASLTK+M
Sbjct: 14  MLIAVCCLLVTIAPVVYADHEKGPANHAQAAALIDVTSGRMLYSKNGDERLRIASLTKIM 73

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V     K     L   + ISKNA     S+   K G  MTL+N L  L+++S ND A
Sbjct: 74  TAIVAIEHGK-----LDDRVKISKNAFAKEGSSIFLKLGEEMTLENLLFGLMLRSGNDAA 128

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AIAE +  TE+ FV  MN  +  LG++ +HFMN HG+    HY++A DMA L+     +
Sbjct: 129 TAIAEHVGGTEEGFVMLMNEKAAQLGMTNSHFMNPHGLDHDEHYSSANDMAKLTAYALKN 188

Query: 181 FPQYMHYFQIKGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                                  K+ N N  +  + GADG+KTG+T  +   +V+SA + 
Sbjct: 189 PVFSEIVKTPTKKAPNPNESWDYKWDNKNKMLRFYEGADGVKTGYTKKAFRCLVSSATRN 248

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
            Q + AV L   +        +++L  GF +   +K      K      ++  
Sbjct: 249 GQQIAAVTLNDGND---WNDHSNMLDYGFAHFPLKKVTEKGQKIQGYTLVTGS 298


>gi|49474302|ref|YP_032344.1| penicillin-binding protein [Bartonella quintana str. Toulouse]
 gi|49239806|emb|CAF26196.1| Penicillin-binding protein [Bartonella quintana str. Toulouse]
          Length = 450

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 93/312 (29%), Positives = 148/312 (47%), Gaps = 4/312 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +  +  I +A+                    ++D NTG  + +        PASLTK+MT
Sbjct: 14  KVAIAFIVLALSCFCASATPQEVYPDKYAAIVIDANTGKTLFQANATLKRYPASLTKMMT 73

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y++F  +  ++    TPI +S+NA+  PP+    K G T++   A K LI +SAND+A 
Sbjct: 74  LYMLFQAMHMRRVTPNTPIPVSRNAAARPPTKLGLKAGQTISAQEAAKALITRSANDVAT 133

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE L   EKKF + M   ++ LG++ THF NA G+    +Y+TARDMA LS  ++  F
Sbjct: 134 AVAEYLGGNEKKFARMMTAKARKLGMTNTHFANASGLPDLRNYSTARDMATLSLALRKHF 193

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           PQ    F+ K    +G    + N  V T  G DG+KTG+T  SG N+  S     +SL+A
Sbjct: 194 PQQYKLFKTKSFVFRGHTVKSHNKLVKTMKGVDGIKTGYTQMSGSNLATSMHIEGRSLVA 253

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V++G      R++  A+LL         +                N     +  + T + 
Sbjct: 254 VVMGGKSSTARDRHMANLL----SQYLPKANSMKNDGRLMASAHYNLPTGANIPIPTVKA 309

Query: 302 EIINYNTQMKEA 313
           +  + + ++   
Sbjct: 310 DPTDSDDEISTI 321


>gi|315644414|ref|ZP_07897547.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus vortex
           V453]
 gi|315280164|gb|EFU43457.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus vortex
           V453]
          Length = 472

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 78/344 (22%), Positives = 137/344 (39%), Gaps = 36/344 (10%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
             +    L++ +TG V+     D    PAS+TK+MT Y+V   +K+ +      +++ +N
Sbjct: 79  LDVSSAVLIEPSTGQVLLSVNADEALPPASMTKMMTEYIVAEKVKQGELAWDEMVSVKEN 138

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A +   S     +G   T++     + V SAND  VA+AE +  +E++FV  MN+T+K +
Sbjct: 139 AEKTVGSRIFLAEGDQHTVEELYIAMAVGSANDATVALAEHVAGSEEEFVTLMNDTAKKM 198

Query: 146 GLSATHFMNAHGVV------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           GL    F+N+ G+                   +A D A+L+  I  D P +  +  I+  
Sbjct: 199 GLKTAFFINSTGLSRADMPEKYRPAEDKETVMSAMDTALLAKFIVEDHPDFARFTAIQSH 258

Query: 194 EIKG---KKYPNTNWA-----------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + +        N NW               + G DG+KTG T A+ +    +A +    L
Sbjct: 259 KFRPRDTHPIINYNWMLEANKDITNFKKYAYEGLDGLKTGHTNAAKYCFAGTAERDGMRL 318

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKK---------INYIIKDFYQQNLSNEVP 290
           I+V++G      R   S  +L  GF N   ++           + I     +   +  V 
Sbjct: 319 ISVVMGTKSEGARFVESKKVLDYGFDNFEVKEVQAAGATVEGFDSIEVKKGKGKQTAVVT 378

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           + +      +      N   +   D  S      K T +     
Sbjct: 379 DKAVTFVVPKGSTGK-NITFEAKLDSSSMTAPVAKGTKVGTVTY 421


>gi|114704888|ref|ZP_01437796.1| hypothetical protein FP2506_08126 [Fulvimarina pelagi HTCC2506]
 gi|114539673|gb|EAU42793.1| hypothetical protein FP2506_08126 [Fulvimarina pelagi HTCC2506]
          Length = 482

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 87/242 (35%), Positives = 135/242 (55%), Gaps = 1/242 (0%)

Query: 20  LSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           + +       Y   ++D N G V+ E+  D    PASLTK+MT Y+ F  L +K+  LT 
Sbjct: 24  MPMQANANAKYAGFVIDANNGKVLYEDRADEYRYPASLTKMMTLYLTFDALSKKRISLTD 83

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A+  PP+      G T+ ++ A+  L+ KSAND +V +AE L  +E  F + M
Sbjct: 84  KMPVSRYAAGRPPTKIGVPAGKTLQVEEAIYSLVTKSANDASVTLAEYLAGSESSFAEMM 143

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
             T+  LG++ T + NA+G+   G  TTARD A L   ++  FPQY  YF  +    +G+
Sbjct: 144 TRTAHKLGMTKTTYKNANGLPDSGQRTTARDQAKLGIALREHFPQYYKYFSTRSYSFRGR 203

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  N N  +G   G DG+KTG+  ASGFN+V+S  +  +SL+AV++G     +R+     
Sbjct: 204 RLGNHNRVLGRMTGVDGIKTGYINASGFNLVSSIKRDGKSLVAVVMGGRSGRSRDNHMVD 263

Query: 259 LL 260
           LL
Sbjct: 264 LL 265


>gi|299135167|ref|ZP_07028358.1| Serine-type D-Ala-D-Ala carboxypeptidase [Afipia sp. 1NLS2]
 gi|298590144|gb|EFI50348.1| Serine-type D-Ala-D-Ala carboxypeptidase [Afipia sp. 1NLS2]
          Length = 597

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 140/265 (52%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  +     D   +PASLTK+MT Y++F  L   K  L + + +S++AS  
Sbjct: 56  ASIVVDANSGATLQSTNADALRHPASLTKIMTLYMLFEQLDSGKLRLDSQLEVSRHASVQ 115

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G T+ +++A+K ++ +SAND AV +AE++  +E+ F + M   ++ LG+S 
Sbjct: 116 APTKLGLRPGQTIRVEDAIKGIVTRSANDAAVVVAEAIGGSEENFCKMMTRKARALGMSK 175

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T ++NA G+      TTARD A L   I+  FP Y  YF       +G    N N  +G 
Sbjct: 176 TTYVNASGLPDDDQITTARDQATLGRAIQDRFPTYYRYFSTSVFTWRGSPIRNHNHLLGQ 235

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+  ASGFN+V +  +G++ L+ V+LG     +R+     LL+        
Sbjct: 236 MDGVDGIKTGYVRASGFNLVTNIRRGNRHLVGVVLGGRSGGSRDATMRRLLAEHLDEGAT 295

Query: 270 RKKINYIIKDFYQQNLSNEVPNISE 294
           R+ +  I +    +  S+E P    
Sbjct: 296 RRTVAAITERNPSRMASDEEPAAKA 320


>gi|291522275|emb|CBK80568.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus catus GD/7]
          Length = 430

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 88/327 (26%), Positives = 144/327 (44%), Gaps = 14/327 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            A T       L++  TG VI E   D   +PAS+TK+MT  +++  L   K  LT  + 
Sbjct: 65  SAVTVISEAAVLMEAGTGTVIYEKNQDVRVSPASITKIMTLLLIYDALYNGKIQLTDEVV 124

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S  A     S    ++G   T++  +K +++ S ND +VA+AE +  +E+ FV  MN  
Sbjct: 125 TSARAKSMGGSQVFLEEGEKQTVETLIKCIVIASGNDASVAMAEYVSGSEEAFVGEMNQK 184

Query: 142 SKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           + +LG++ THF++  G+   + HYTTA+D+AI++  + T++P    Y  I    I     
Sbjct: 185 AADLGMNGTHFVDCCGLTDSNDHYTTAKDVAIMARALITNYPDISQYATIWMENITHVTA 244

Query: 200 -------YPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                    NTN    +       G+KTG T  +G+    +A++   SLIAV++ A D  
Sbjct: 245 KGSSEFGLSNTNKLLKMANNFEVTGLKTGSTAKAGYCFCGTAVKDGLSLIAVVMDAPDYK 304

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYN 307
            R   +  LL+ GF N +  +  +  +            +       +         N  
Sbjct: 305 IRFSEAQQLLNYGFANCSAYRDDHPPVLLPMAIKDGKTESVELMYDGQFSYVALRGENLE 364

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
               + +  ES F  FE  T     I 
Sbjct: 365 NIHSKLQLDESLFPPFEAGTKAGRLIY 391


>gi|294676801|ref|YP_003577416.1| D-alanyl-D-alanine carboxypeptidase [Rhodobacter capsulatus SB
           1003]
 gi|294475621|gb|ADE85009.1| D-alanyl-D-alanine carboxypeptidase-2 [Rhodobacter capsulatus SB
           1003]
          Length = 386

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 117/318 (36%), Gaps = 9/318 (2%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     + D  T  V+ E   D    PAS++KLMT  ++F  L E +  L T   +S
Sbjct: 23  FDTRARTAWVYDLTTQTVLLEKDADVAVPPASMSKLMTLNMLFEALSEGRVTLDTTFAVS 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             A +   S     +    ++   ++ +++ S ND  V +AE L  +E  F   M   +K
Sbjct: 83  TKAKQMGGSTMFLNEMDRPSVRELMQGVVINSGNDACVVVAEGLAGSEGAFAAGMTERAK 142

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---KY 200
            LG++ + F NA G        +  D+ IL+ R+ T FPQY   F       K +     
Sbjct: 143 MLGMTRSTFANASGWPHPDQRMSMHDLGILAVRLITQFPQYYPLFSETQFNYKNRAPANA 202

Query: 201 PNTN---WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            N N           ADG+KTG T  +G+ +V SA+ GD+ ++ VI G      R   + 
Sbjct: 203 HNRNPLLKIPAADWHADGLKTGHTEEAGYGLVGSAVMGDRRIVFVISGLASEADRASEAE 262

Query: 258 SLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           ++ +  F     +          +          V  +                   EA 
Sbjct: 263 AVANWAFRQFVMKTVAQKGTRLAEAPVWLGTEASVGLVPASDVAMLIPAGAAEGVKAEAV 322

Query: 315 DKESHFIDFEKITLLKNK 332
                       T L   
Sbjct: 323 FDGPVTAPVTAGTELGRL 340


>gi|254673307|emb|CBA08444.1| putative penicillin-binding protein precursor [Neisseria
           meningitidis alpha275]
          Length = 389

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 79/352 (22%), Positives = 141/352 (40%), Gaps = 24/352 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY--------------TLLDTNTGHVIAENYP 47
           +   V++++ +  +     S A      +                ++D  +   ++    
Sbjct: 5   KILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETLTAAHIVIDLQSRQTLSAKNI 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           + P  PA+LT+LMTAY+VF  +K         + I ++A     S    + G T++ D  
Sbjct: 65  NTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPESAWASEGSRMFVRPGDTVSTDKL 124

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           LK +I  SAND A+ +A      + + FVQ MN  ++ LG+  T F N  G+ + G  +T
Sbjct: 125 LKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEARRLGMKNTVFKNPTGLSREGQVST 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A+D+A LS  +  DFP+Y   F IK  + K  +  N N  +      +G+K G T + G+
Sbjct: 185 AKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQNNRNILLYRDNNVNGLKAGHTESGGY 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           N+  S     + ++ + LG+    TR   ++ LL+         K           Q   
Sbjct: 245 NLAVSYSGNGRHILVITLGSESAETRASDNSKLLNRALQAFDTPKIYPKGKTVAQIQISG 304

Query: 287 NEVPNIS------EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +         +    KE       ++     +      +K  +L   
Sbjct: 305 GSKKTVRAGFLKEAYITLPHKEAKMAEQILET---IQPIPAPVKKGQILGKI 353


>gi|13470857|ref|NP_102426.1| penicillin-binding protein [Mesorhizobium loti MAFF303099]
 gi|14021600|dbj|BAB48212.1| penicillin-binding protein [Mesorhizobium loti MAFF303099]
          Length = 485

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 92/321 (28%), Positives = 151/321 (47%), Gaps = 17/321 (5%)

Query: 1   MRQFLV------------IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           MR+ L+            ++  A+          +     P   ++D  TG V+     +
Sbjct: 1   MRKALLGIVSKSTSPLKAMMVFALAMTFVCADVASSLAARPAAIVVDAKTGKVLYSADAN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
               PASLTK+MT Y+ F  + + K    TP+  S  AS   P+    K G +++++ A+
Sbjct: 61  GRRYPASLTKMMTLYLTFEAMAKGKISRNTPVVFSAKASAEAPTKLGVKPGGSVSVETAI 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             ++ KSAND A A+ E L   E  F + M   ++ LG++ T F NA+G+   G +TTAR
Sbjct: 121 LSIVTKSANDSATALGEMLGGDETTFARMMTAKARALGMNGTVFRNANGLPDPGQFTTAR 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           DMA L   ++  FPQY  YF  +      ++    N  +G   G DG+KTG+T ASGFN+
Sbjct: 181 DMATLGIALREHFPQYYGYFSQRSFLYGRQRINGHNRLLGRIKGVDGIKTGYTRASGFNL 240

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           V+S   G++ L+AV++G     +R+   ASL+     N    +       D   +  S+ 
Sbjct: 241 VSSVSDGNRRLVAVVMGGTSGGSRDNQMASLI-----NTYMPRASTRGGGDLVAKADSSN 295

Query: 289 VPNISEEVCTTQKEIINYNTQ 309
                 +V   + +    + +
Sbjct: 296 PVKALAKVLLPKHDAPTPDDK 316


>gi|322388019|ref|ZP_08061626.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus infantis
           ATCC 700779]
 gi|321141292|gb|EFX36790.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus infantis
           ATCC 700779]
          Length = 413

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 147/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL +I +    +     +        +   ++ N+G ++ E     P   AS++KL
Sbjct: 1   MKKLFLTLITLISFGSATTVFAQDFDVAAKHAIAVEANSGKILYEKDATQPVEIASISKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L++ K  L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  LTVYLVYEALEQGKITLSTPVEISDYPYQLTTNSEASNVPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKVAGSEKDFVDMMKAKLLEWGIQDATLVNTTGLNNETLGNNIYPGSKKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +   +PQ +   +       G    +TN  +        G DG+KT
Sbjct: 181 NKMSAYDVAVVARNLILKYPQVLEITKKPSSTFAGMTIHSTNSMLDGMPAYRGGIDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A +++T    R   +++LL     N   +  + 
Sbjct: 241 GNTDKAGASFVGTTVEKGMRIITVVLNADNQDTNPYARFTATSALLDYISSNFALQTIVK 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                       Y            E++   Q+      + +    D   H    E  T+
Sbjct: 301 QGESYQDSKSPVYDGKQDTVTAVAKEDIKIVQRLGSRAESTVTYTPDATEHVAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|154248459|ref|YP_001419417.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xanthobacter
           autotrophicus Py2]
 gi|154162544|gb|ABS69760.1| Serine-type D-Ala-D-Ala carboxypeptidase [Xanthobacter
           autotrophicus Py2]
          Length = 663

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 87/233 (37%), Positives = 135/233 (57%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D NTG V+ E+ PD   +PAS+TK+MT Y++F  L+     L + + +S  A+ 
Sbjct: 74  SSAIIVDANTGKVLYEDNPDALRHPASVTKIMTLYLLFEQLEAGNLKLDSDLQVSAKAAS 133

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
             PS    K GS + +++A+K L+ +SAND+AV IAE+L  +E +F + M   ++ LG+S
Sbjct: 134 QQPSKLGVKPGSAIEVEDAIKALVTRSANDVAVVIAENLGGSESEFAEMMTRKARALGMS 193

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T F NA G+      TTARD++IL   I+  FP+   YF  +    +G+   N N  +G
Sbjct: 194 RTVFRNASGLPNPNQVTTARDLSILGRAIQDRFPKQYKYFATRTFYYRGQAIGNHNRLLG 253

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
              G DG+KTG+T ASGFN+V S  +  + L+ V+LG      R+    +L+S
Sbjct: 254 RVEGVDGIKTGYTQASGFNLVTSVKRDGRFLVGVVLGGSSAGARDARMTNLIS 306


>gi|293400812|ref|ZP_06644957.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305838|gb|EFE47082.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 378

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 11/319 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 L++  +G VI          PAS+TK+M   ++F  L + K      +T S  A
Sbjct: 26  NAKSAYLMEYTSGKVIYAKNEKAKLYPASMTKMMGLLLIFESLHDGKLDWKDEVTTSAYA 85

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    ++  TM++ + +K + + SAND  VA+AE +  + + FV+ MN  +K L 
Sbjct: 86  ASMGGSQVFLEENETMSVKDMIKSICIASANDAMVAMAEKVGGSAEHFVEMMNEKAKKLN 145

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------HYFQIKGLEIKGKKY 200
           L  THFMN  G+    HYT A+DMAI+   +  +    +      +   I+    K    
Sbjct: 146 LCNTHFMNPTGLHDPQHYTCAKDMAIVGKALIKEGGDDLLKITSTYDAYIREDSEKAFWL 205

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            NTN  +  + G DG+K+GFT  +   I  +A + D  LIAV++G      RN     +L
Sbjct: 206 VNTNKLLKQYPGVDGLKSGFTSQAMSCITITAKKKDLRLIAVVMGEPSSKVRNGEIKQML 265

Query: 261 SMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
             GF             K                   +++    ++        KE   +
Sbjct: 266 DYGFSQYQQGLLYAAGTKMKTIPIENGKPQKVDVLTDKDLVYVFEKGSEPKETAKEISLR 325

Query: 317 ESHFIDFEKITLLKNKITK 335
           ++H   F+K  ++     K
Sbjct: 326 KTH-APFKKGEIIGKVQIK 343


>gi|85858430|ref|YP_460632.1| D-alanyl-D-alanine serine-type carboxypeptidase [Syntrophus
           aciditrophicus SB]
 gi|85721521|gb|ABC76464.1| D-alanyl-D-alanine serine-type carboxypeptidase [Syntrophus
           aciditrophicus SB]
          Length = 310

 Score =  169 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 32/297 (10%)

Query: 1   MRQFLVIIAMAMLSNIF---------PFLSIAETNKL----------------------- 28
           M++  ++ ++ +                       K                        
Sbjct: 1   MKKLAILFSILLTVFFIQPSELMARKAPKKKTPEVKAAVGKSVSKKRVARKSPRNTAPEI 60

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L+D     V+ E   D P  PASLTK+++ Y+ +  + + +      + +S+ A +
Sbjct: 61  KSSILMDMTDRRVLYEQNADQPIQPASLTKVLSLYLTYEAMAQGRVRWLDSVVVSQAARQ 120

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    + G  + L+  +K + V SAND +VA+AE +     +FV+ MN  +  LG++
Sbjct: 121 ADGSRMYIEAGERVPLETLIKGMTVISANDASVAVAEHVAGNVDRFVERMNRKAGELGMT 180

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            + F   +G+   G YTTARDM IL+      FP  +    ++    K     N N  + 
Sbjct: 181 HSVFRTPNGLPAEGQYTTARDMMILADAYLRRFPGSLALHSMQYYTYKKITQHNCNALLK 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +   DG+K+GF  ASG+N++A+A +G+  LIAV++GA     R + +  LL  GF 
Sbjct: 241 KYPDVDGLKSGFVRASGYNLIATARRGNTRLIAVVMGARTPEIRVRETRRLLDAGFQ 297


>gi|317126753|ref|YP_004093035.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           cellulosilyticus DSM 2522]
 gi|315471701|gb|ADU28304.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           cellulosilyticus DSM 2522]
          Length = 479

 Score =  169 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 73/407 (17%), Positives = 147/407 (36%), Gaps = 75/407 (18%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++    ++L+ +    +  E++ L    L+D +TG ++     D P  PAS+ K+M+ Y
Sbjct: 12  LIIFTFTSLLTGVTTTKADYESDLLETGILVDADTGKILYGRNIDQPLPPASMVKMMSIY 71

Query: 64  VVFSFLKEKKAMLTTPITISKN-----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++   +++        + I+       + +   SN   +K    T+    + + + SAN 
Sbjct: 72  LIHESIEKGDISWDDIVYINDYLVNDLSKQINLSNVPLRKDEDYTVRELYESIAIYSANA 131

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSA------------------------THFMN 154
             +A+AE +  +E  FV+ MN   K LG+                            F+N
Sbjct: 132 SMMAVAEHIAGSEGSFVEMMNEKGKELGMGNLLREEGEKHGISNLNEIAEANLGDFQFVN 191

Query: 155 AHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           + G+                  ++ +AR  A L++ +  D+P+ +    I  +  K    
Sbjct: 192 STGLPNSVLLENRPSGTEIDDDNFMSARATATLAYHLLNDYPEVLETASIPEMTFKEGTE 251

Query: 200 ----YPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL---- 247
                PN N         +  ADG+KTG T A+G     +A++  + LI V++G      
Sbjct: 252 DAIVMPNWNKMLEGRGHFYEYADGLKTGTTTAAGACFTGTAVKNGRRLITVVMGLPRPLT 311

Query: 248 ----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
               D   R   +  L+  GF N +  +     +     + +            +T   +
Sbjct: 312 SRPEDDLARYDETRKLMEYGFNNFSRVELYPENMTIEGFEEIPVVKGKEDVVSISTTDAV 371

Query: 304 INYNTQMKEAKDKES---------------HFIDFEKITLLKNKITK 335
             +  +  E   + S                    E  T++   + +
Sbjct: 372 SAFVHRNDEESYQYSVVFNEDDELFDSEGRLIAPIEANTVIGQLVVE 418


>gi|114707363|ref|ZP_01440260.1| penicillin-binding protein [Fulvimarina pelagi HTCC2506]
 gi|114537244|gb|EAU40371.1| penicillin-binding protein [Fulvimarina pelagi HTCC2506]
          Length = 299

 Score =  169 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 17/277 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           R     +++ ML+        AE                   +     ++D  TG  + E
Sbjct: 16  RLLAAFLSLGMLAGCQSSQLTAEGLMPASQPVAPIAFSQIERRGHSALVVDFGTGRTLYE 75

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           +  D    PASLTK+MT Y++F  ++  +    T   +S+NA+  PPS    K G ++ +
Sbjct: 76  DQADELRYPASLTKMMTLYLLFEAVENGQLSRETQFIVSENAASKPPSKLGLKPGESIPV 135

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
             A+  L VKSAND+A  +AE++  TE+ F   M   +++LG++ T F NA G+      
Sbjct: 136 SLAMTALAVKSANDVATVVAENMAGTEEAFAAVMTRKARSLGMNHTQFANASGLPNPQQV 195

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           ++ARDMAIL   I + +P Y   F     +  G+ Y +TN  +G   G DGMKTG+   +
Sbjct: 196 SSARDMAILGRAIMSRYPSYAQLFATPSYQYNGRTYNSTNKLLGKVAGVDGMKTGYINDA 255

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           G ++VA+  +  + LI V+LG      R+     L+ 
Sbjct: 256 GSHLVATVRRNGRRLIVVVLGGDSSRKRDAEVTELIE 292


>gi|209549453|ref|YP_002281370.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209535209|gb|ACI55144.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 517

 Score =  169 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 3/261 (1%)

Query: 3   QFLVIIAMAMLSNIF-PFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + + I+++A+   +     + AE     Y   ++D  TG+V+     D    PASLTK+M
Sbjct: 19  KLMAILSVALTVVLVDSVSAEAEAANSKYAGIVVDAKTGNVLYSENADRLQYPASLTKMM 78

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A
Sbjct: 79  TIYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAA 138

Query: 121 VAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            A+ E L    +  F Q M   +  LG++ T + NA+G+      TTARD A L   ++ 
Sbjct: 139 TALGEMLGGGSEDRFAQLMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQ 198

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FPQY  YF  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S+
Sbjct: 199 HFPQYYGYFSTRAFKFGTRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSI 258

Query: 240 IAVILGALDRNTRNKVSASLL 260
           + V+LG      R+    +L+
Sbjct: 259 VGVVLGGASTPARDAQMRNLI 279


>gi|319407837|emb|CBI81490.1| penicillin-binding protein [Bartonella sp. 1-1C]
          Length = 360

 Score =  169 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 120/335 (35%), Positives = 193/335 (57%), Gaps = 13/335 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M Q    +  + + +I   L++A       +  +DT TG ++  N     W PASLTKLM
Sbjct: 1   MHQLFHTLFFSFILSIISSLTLAHP-----FISVDTTTGRILKHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
             Y++F  +   K      ITISKNA++ P  +S +K GS +TLD ALK+ +VKS ND+A
Sbjct: 56  MTYIIFRAMSTGKISPYKHITISKNAAQAPAIHSGYKAGSVLTLDTALKITLVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +AI+E++  +++ FV+ MN  ++ LG+  T+F N  G+    +Y+TARDMA+L+ +I+ +
Sbjct: 116 IAISEAISGSQEAFVKQMNAEARRLGMFGTNFTNTSGLPNPNNYSTARDMALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    K    N N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYTHYFSIPAIDFGNGKKIQSNLNNLIGRFDGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +I VILG+   N R + +A LL  GF +K   +     ++ +  +   +++ ++ +++CT
Sbjct: 236 IIVVILGSESINKREEKAAQLLDAGFLDKGSPQLTLATLEPYGTKI--SQITDMKQQICT 293

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            +   +  N+  +E     +  +    IT L + I
Sbjct: 294 PEAIKMRLNSYDEEGNIILTSPL----ITALPSSI 324


>gi|217976936|ref|YP_002361083.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocella silvestris
           BL2]
 gi|217502312|gb|ACK49721.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocella silvestris
           BL2]
          Length = 614

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 80/232 (34%), Positives = 135/232 (58%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  +     D P +PAS+TK+MT Y++F  L++ +  L + I IS  A+  
Sbjct: 81  AAIVVDGNSGEALYARNEDEPRHPASITKVMTLYLLFEQLEQGRLRLDSEIPISARAAAQ 140

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G T+++D+A+K ++ +SANDIAVAIAE++   E +F   M   ++ LG+  
Sbjct: 141 KPTKLGLRPGRTISVDDAIKAIVTRSANDIAVAIAEAVGGDEDRFADLMTRKARELGMRN 200

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T ++NA G+      TTARD++IL   ++  FP+Y  YF  +     G    N N  +  
Sbjct: 201 TKYVNASGLPADAQITTARDLSILGRAVQERFPRYYRYFSTRTFYFAGAAIRNHNRLMDR 260

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             G DG+KTG+T ASGFN++ S  +    ++AV++G +   +R+++ A L+ 
Sbjct: 261 VEGMDGIKTGYTNASGFNLLTSVKRDGHYIVAVVMGGVSAPSRDRIMADLIE 312


>gi|332097261|gb|EGJ02244.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella boydii 3594-74]
          Length = 268

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 86/252 (34%), Positives = 130/252 (51%), Gaps = 7/252 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKDVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDRN 250
           LI+V+LGA    
Sbjct: 257 LISVVLGAKTDR 268


>gi|59800884|ref|YP_207596.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae FA 1090]
 gi|240016201|ref|ZP_04722741.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae FA6140]
 gi|240080345|ref|ZP_04724888.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae FA19]
 gi|240112554|ref|ZP_04727044.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae MS11]
 gi|240117582|ref|ZP_04731644.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae PID1]
 gi|240123137|ref|ZP_04736093.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae PID332]
 gi|254493357|ref|ZP_05106528.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae 1291]
 gi|268596491|ref|ZP_06130658.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae FA19]
 gi|268598622|ref|ZP_06132789.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae MS11]
 gi|268603285|ref|ZP_06137452.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae PID1]
 gi|268681765|ref|ZP_06148627.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae PID332]
 gi|59717779|gb|AAW89184.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae FA 1090]
 gi|226512397|gb|EEH61742.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae 1291]
 gi|268550279|gb|EEZ45298.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae FA19]
 gi|268582753|gb|EEZ47429.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae MS11]
 gi|268587416|gb|EEZ52092.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae PID1]
 gi|268622049|gb|EEZ54449.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae PID332]
          Length = 389

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 34  AAPTLQTPETLTA-AHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQ 92

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T++ D  LK +I   AND A+ +A+     + + F
Sbjct: 93  SEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+++LS  +  DFP+Y   F IK  +
Sbjct: 153 VQQMNKEARRLGMKNTVFKNPTGLGREGQVSTAKDLSLLSEALMRDFPEYYPLFSIKSFK 212

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR  
Sbjct: 213 FENIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRAS 272

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 273 DNSKLLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 332

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 333 ILET---IQPIPAPVKKGQILGKI 353


>gi|62289915|ref|YP_221708.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82699842|ref|YP_414416.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis biovar
           Abortus 2308]
 gi|189024158|ref|YP_001934926.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
 gi|237815417|ref|ZP_04594415.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|254697357|ref|ZP_05159185.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family protein [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260545336|ref|ZP_05821077.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260761773|ref|ZP_05874116.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|62196047|gb|AAX74347.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82615943|emb|CAJ10966.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella
           melitensis biovar Abortus 2308]
 gi|189019730|gb|ACD72452.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
 gi|237790254|gb|EEP64464.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|260096743|gb|EEW80618.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260672205|gb|EEX59026.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
          Length = 396

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 144/337 (42%), Gaps = 11/337 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFTGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P+Y  Y++            N N  +   +GADGM TGFT ASG+ +V SA Q  + 
Sbjct: 195 AAHPEYYRYYEQPAYTWNNITQRNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNI 292
           L   + G      R + +  L+  G     D +      K    Q    +      V   
Sbjct: 255 LFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAANDKVGDAQVFGGQSSTLPLVVKK 314

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             E+   ++       ++      ++      ++  L
Sbjct: 315 DVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRL 351


>gi|170760236|ref|YP_001788291.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407225|gb|ACA55636.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 415

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/348 (22%), Positives = 138/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSILLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG + T+F+N  G+  + H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFSKDMNKRAKELGCTNTNFVNPSGLYNNKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSREKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKDNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + E     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASEDFYYLKPKDDNMAPNLKLENTNLKNLKFKKGDVV 342


>gi|148559355|ref|YP_001258933.1| D-alanyl-D-alanine carboxypeptidase [Brucella ovis ATCC 25840]
 gi|148370612|gb|ABQ60591.1| D-alanyl-D-alanine carboxypeptidase [Brucella ovis ATCC 25840]
          Length = 396

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 148/343 (43%), Gaps = 11/343 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFAGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P+Y  Y++            N N  +   +GADGM TGFT ASG+ +V SA Q  + 
Sbjct: 195 AAHPEYYRYYEQPAYTWNNITQRNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNI 292
           L   + G      R + +  L+  G     D +      K    Q    +      V   
Sbjct: 255 LFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAANDKVGDAQVFGGQSSTLPLVVKK 314

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             E+   ++       ++      ++      ++  L+ ++ +
Sbjct: 315 DVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRLQFELNR 357


>gi|266618868|ref|ZP_06111806.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|263528518|gb|EEZ28341.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
          Length = 415

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 138/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSILLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG + T+F+N  G+  + H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFSKDMNKRAKELGCTNTNFVNPSGLYNNKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKNNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|327189245|gb|EGE56423.1| putative serine-type D-Ala-D-Ala carboxypeptidase protein
           [Rhizobium etli CNPAF512]
          Length = 493

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 82/253 (32%), Positives = 133/253 (52%), Gaps = 1/253 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               +  +    + AE     Y   ++D  TG+V+     D    PASLTK+MT Y+ F 
Sbjct: 1   MAVTVVLVDSVNAEAEAANPKYAGIVVDAKTGNVLYSENADRLQYPASLTKMMTLYMTFE 60

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A A+ E L
Sbjct: 61  ALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAATALGEML 120

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E +F Q M   +  LG++ T + NA+G+      TTARD A L   ++  FPQY  Y
Sbjct: 121 GGSEDRFGQMMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQYYGY 180

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S+++V+LG  
Sbjct: 181 FSTRAFKFGTRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSIVSVVLGGT 240

Query: 248 DRNTRNKVSASLL 260
               R+    +L+
Sbjct: 241 SGPARDAQMRNLI 253


>gi|256061084|ref|ZP_05451239.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261325086|ref|ZP_05964283.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261301066|gb|EEY04563.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
          Length = 396

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 144/337 (42%), Gaps = 11/337 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFAGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P+Y  Y++            N N  +   +GADGM TGFT ASG+ +V SA Q  + 
Sbjct: 195 AAHPEYYRYYEQPAYTWNNITQRNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNI 292
           L   + G      R + +  L+  G     D +      K    Q    +      V   
Sbjct: 255 LFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAANDKVGDAQVFGGQSSTLPLVVKK 314

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             E+   ++       ++      ++      ++  L
Sbjct: 315 DVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRL 351


>gi|322376423|ref|ZP_08050916.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. M334]
 gi|321282230|gb|EFX59237.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. M334]
          Length = 413

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 147/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++ ++ ++++ +     +        +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIILTLLTLSVIGSASTVAAQDFNIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS           +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYRLTTNSEASNVPMEARNYTVEQLLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAHRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    +++   ++     +  ++   D ++     E  T+
Sbjct: 301 KGDAYQDSKVPVQDGKEDTVTAVAKDDISLVERVGNQSSKSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|330814086|ref|YP_004358325.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487181|gb|AEA81586.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 379

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 144/345 (41%), Gaps = 12/345 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  +++    L  I  + + A         L+D N+G V+ +   +   +PAS+TK+M
Sbjct: 1   MKKITILLISFFL--IQAYNANALITSAKQAILMDVNSGQVLFKKNENEKISPASITKVM 58

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T+ + F  +K  +  L     +S  A        S+        +T+ N LK +I+ S N
Sbjct: 59  TSIIAFDLIKSGELKLNEKFLVSNKAWRMAKQGYSSMFIVPNDRITVLNLLKGIIIASGN 118

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  +A+AE +  +E  F   MN+ +K++G++ T+F N+ G+    +Y+T  D++++S  +
Sbjct: 119 DACIALAEGIAGSEAAFASMMNDKAKSIGMTNTNFSNSSGIYSEDNYSTVSDISLMSVYL 178

Query: 178 KTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
             +FP+    +  +               N N  +      DG+KTG    SG+++ A+ 
Sbjct: 179 IKEFPELYKMYAERTFTWDRTGGNPITQSNRNTLLYKNSKVDGIKTGHLNDSGYSLAATM 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT--DRKKINYIIKDFYQQNLSNEVP 290
           +  ++ +++V+ G   +  R K S  LL+           KK N +          + + 
Sbjct: 239 LVNNRRILSVVSGTNSQKERAKESLKLLNHAIITTELLLVKKENPLFSINTWNGKKSSIK 298

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              E+                  +  E     F+    L     K
Sbjct: 299 LELEKDLYITYSKRRSRDIKMYLEVSEPIKDHFKASDQLGVLRIK 343


>gi|226950403|ref|YP_002805494.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|226841760|gb|ACO84426.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A2 str. Kyoto]
          Length = 415

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 136/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSILLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG   T+F+N  G+    H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFSKDMNKRAKELGCINTNFVNPSGLYNDKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKNNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|17987273|ref|NP_539907.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|23501872|ref|NP_697999.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|161618945|ref|YP_001592832.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|163843260|ref|YP_001627664.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
 gi|225627469|ref|ZP_03785506.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti str. Cudo]
 gi|225852496|ref|YP_002732729.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis ATCC
           23457]
 gi|254689222|ref|ZP_05152476.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|254693707|ref|ZP_05155535.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|254701743|ref|ZP_05163571.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|254704285|ref|ZP_05166113.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|254706813|ref|ZP_05168641.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|254710077|ref|ZP_05171888.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|254730255|ref|ZP_05188833.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|256031573|ref|ZP_05445187.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|256044652|ref|ZP_05447556.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113538|ref|ZP_05454364.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|256257472|ref|ZP_05463008.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|256264013|ref|ZP_05466545.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|256369413|ref|YP_003106921.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|260168704|ref|ZP_05755515.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. F5/99]
 gi|260563998|ref|ZP_05834484.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|260566468|ref|ZP_05836938.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|260754727|ref|ZP_05867075.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260757950|ref|ZP_05870298.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260883748|ref|ZP_05895362.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|261213979|ref|ZP_05928260.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|261314280|ref|ZP_05953477.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261317626|ref|ZP_05956823.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|261752296|ref|ZP_05996005.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|261754953|ref|ZP_05998662.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|261758181|ref|ZP_06001890.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella sp. F5/99]
 gi|265988661|ref|ZP_06101218.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|265991076|ref|ZP_06103633.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265994911|ref|ZP_06107468.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|297248317|ref|ZP_06932035.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Brucella abortus bv. 5 str. B3196]
 gi|17982950|gb|AAL52171.1| d-alanyl-d-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|23347810|gb|AAN29914.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|161335756|gb|ABX62061.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|163673983|gb|ABY38094.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
 gi|225617474|gb|EEH14519.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti str. Cudo]
 gi|225640861|gb|ACO00775.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis ATCC
           23457]
 gi|255999573|gb|ACU47972.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|260154014|gb|EEW89106.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|260155986|gb|EEW91066.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|260668268|gb|EEX55208.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260674835|gb|EEX61656.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260873276|gb|EEX80345.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|260915586|gb|EEX82447.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|261296849|gb|EEY00346.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|261303306|gb|EEY06803.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261738165|gb|EEY26161.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella sp. F5/99]
 gi|261742049|gb|EEY29975.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|261744706|gb|EEY32632.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|262766024|gb|EEZ11813.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|263001860|gb|EEZ14435.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263094156|gb|EEZ18078.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|264660858|gb|EEZ31119.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|297175486|gb|EFH34833.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Brucella abortus bv. 5 str. B3196]
 gi|326409012|gb|ADZ66077.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis M28]
 gi|326538722|gb|ADZ86937.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis
           M5-90]
          Length = 396

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 144/337 (42%), Gaps = 11/337 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFAGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P+Y  Y++            N N  +   +GADGM TGFT ASG+ +V SA Q  + 
Sbjct: 195 AAHPEYYRYYEQPAYTWNNITQRNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNI 292
           L   + G      R + +  L+  G     D +      K    Q    +      V   
Sbjct: 255 LFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAANDKVGDAQVFGGQSSTLPLVVKK 314

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             E+   ++       ++      ++      ++  L
Sbjct: 315 DVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRL 351


>gi|115525408|ref|YP_782319.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisA53]
 gi|115519355|gb|ABJ07339.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisA53]
          Length = 584

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 89/241 (36%), Positives = 137/241 (56%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++    +      ++D NTG  ++ N PD    PASLTK+MT Y++F  L+  K  L + 
Sbjct: 45  VATESYSPAFASIIVDGNTGATLSANNPDALRRPASLTKIMTLYLLFERLEAGKLSLDSE 104

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + +S++AS   P+    + G T+ +++A+K L+ +SAND AV IAE++   E  F + M 
Sbjct: 105 MDVSEHASIQAPTKLGLRPGQTLRVEDAIKALVTRSANDAAVVIAEAIGGDEDDFAKLMT 164

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG++ T + NA G+      TTARD A L   I+  FP+Y  YF       KG  
Sbjct: 165 KKARALGMTRTVYRNASGLPNDDQITTARDQATLGRAIQERFPRYYRYFATSVFVYKGHA 224

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  +G+  G DG+KTG+T ASGFN+V+S  +G++ LI V+LG     +R+    SL
Sbjct: 225 IRNHNRLLGSVEGVDGIKTGYTRASGFNLVSSMRRGNRHLIGVVLGGRSGGSRDAAMRSL 284

Query: 260 L 260
           L
Sbjct: 285 L 285


>gi|322807302|emb|CBZ04876.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum H04402
           065]
          Length = 415

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 137/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSVLLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG + T+F+N  G+    H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFSKDMNKRAKELGCTNTNFVNPSGLYNDKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKNNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|91977526|ref|YP_570185.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB5]
 gi|91683982|gb|ABE40284.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisB5]
          Length = 578

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 90/277 (32%), Positives = 153/277 (55%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D NTG  +    PD   +PASLTK+MT Y++F  L++ K  L + + +S++A
Sbjct: 54  PAFASIIVDANTGATLTATNPDALRHPASLTKIMTLYMLFERLEQGKLQLDSEMEVSEHA 113

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           S   P+    + G ++ +++A+K L+ +SAND AV IAE++  +E  F + M   ++ LG
Sbjct: 114 SSQAPTKLGLRPGQSLRVEDAIKGLVTRSANDAAVVIAETVGGSETDFAKMMTRKARALG 173

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T + NA G+      TTARD +IL   I+  FP+Y  YF       +G    N N  
Sbjct: 174 MSRTVYRNASGLPNDDQVTTARDQSILGRAIQDRFPRYYRYFATASFNYRGNSIRNHNRL 233

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G   G DG+KTG+T ASGFN+V S  +G++ L+ V+LG     +R+ +  +LL+     
Sbjct: 234 LGNVEGVDGIKTGYTRASGFNLVTSMHRGNRFLVGVVLGGRSGGSRDAIMRNLLAENLEK 293

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
            ++R+ +  I++    Q  ++   + + +  T Q + 
Sbjct: 294 ASNRRTVAAIVERSPSQIDTDVASDDTRQAPTVQVQG 330


>gi|239998641|ref|ZP_04718565.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae 35/02]
 gi|240013763|ref|ZP_04720676.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae DGI18]
 gi|240115295|ref|ZP_04729357.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae PID18]
 gi|240120831|ref|ZP_04733793.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae PID24-1]
 gi|240125386|ref|ZP_04738272.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae SK-92-679]
 gi|240127841|ref|ZP_04740502.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae SK-93-1035]
 gi|260440888|ref|ZP_05794704.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae DGI2]
 gi|268594495|ref|ZP_06128662.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae 35/02]
 gi|268600975|ref|ZP_06135142.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae PID18]
 gi|268683987|ref|ZP_06150849.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686238|ref|ZP_06153100.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268547884|gb|EEZ43302.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae 35/02]
 gi|268585106|gb|EEZ49782.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae PID18]
 gi|268624271|gb|EEZ56671.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268626522|gb|EEZ58922.1| D-alanyl-D-alanine carboxypeptidase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 389

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 34  AAPTLQTPETLTA-AHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQ 92

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T++ D  LK +I   AND A+ +A+     + + F
Sbjct: 93  SEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+A+LS  +  DFP+Y   F IK  +
Sbjct: 153 VQQMNKEARRLGMKNTVFKNPTGLGREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFK 212

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR  
Sbjct: 213 FENIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRAS 272

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 273 DNSKLLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 332

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 333 ILET---IQPIPAPVKKGQILGKI 353


>gi|148380930|ref|YP_001255471.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153933353|ref|YP_001385299.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|153936108|ref|YP_001388707.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. Hall]
 gi|148290414|emb|CAL84541.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|152929397|gb|ABS34897.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|152932022|gb|ABS37521.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. Hall]
          Length = 415

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 137/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSILLFSLFFSNVALAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG + T+F+N  G+    H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFSKDMNKRAKELGCTNTNFVNPSGLYNDKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNILPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKNNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|327190645|gb|EGE57733.1| putative D-alanyl-D-alanine carboxypeptidase protein [Rhizobium
           etli CNPAF512]
          Length = 290

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 135/261 (51%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    L +     + A+        ++D  +G V+  +  D    PASLTK+M
Sbjct: 1   MTKMTSRLRATALWSALLISAFAQAEAGQASFVVDVRSGQVLEASNQDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHQGRLTWEQKLTMSENAESKEPFKLAIGAGRQVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + +  LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 121 VAIAEQLGGSEQAFARAMTDKAHQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F ++G + +G K    N  +  + G DG+KTG+T ASG+N+V SA++G + ++
Sbjct: 181 FPEEFKLFSMRGFQFRGMKLRGHNNLMYRYDGVDGIKTGYTDASGYNVVTSALKGGRRVV 240

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V++G    + R+   A LL 
Sbjct: 241 GVVMGEKTASIRDDKMAGLLD 261


>gi|306840479|ref|ZP_07473238.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO2]
 gi|306289494|gb|EFM60712.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO2]
          Length = 396

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 133/315 (42%), Gaps = 8/315 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            K P   L+D  +G V+     D P  PASL KLMTA VVF  L++ +  L T   +S+ 
Sbjct: 37  TKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAEVVFEALEKGRTTLETAYPVSEY 96

Query: 86  ASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           A          S    +  ST T+ + L+ +IV+SAND A+ +AE L  +E+ F   MN 
Sbjct: 97  AWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSANDGAIVLAEGLAGSEQTFAGAMNQ 156

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K LGLS++ F+N+ G+   G   T  D+  L+  I    P+Y  Y+            
Sbjct: 157 RAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIHAAHPEYYRYYAQPAYTWNNITQ 216

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +   +GADGM TGFT ASG+ +V SA Q  + L   + G      R + +  L+
Sbjct: 217 RNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRRLFLAMSGLASVKEREEEARKLI 276

Query: 261 SMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
             G     D +      K          S+ +P + ++                    + 
Sbjct: 277 QWGMTGFDDMRIFAANDKVGDAQVFGGKSSTLPLVVKKDVELLLPKEAREKLKARIIYEG 336

Query: 318 SHFIDFEKITLLKNK 332
                    T +   
Sbjct: 337 PLQAPIAAGTEVGRL 351


>gi|301794006|emb|CBW36404.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pneumoniae INV104]
 gi|332204876|gb|EGJ18941.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA47901]
          Length = 413

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 150/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITAYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK F+  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFIDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|306843866|ref|ZP_07476461.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO1]
 gi|306275621|gb|EFM57345.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. BO1]
          Length = 396

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 90/337 (26%), Positives = 139/337 (41%), Gaps = 8/337 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFAVAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P+Y  Y+             N N  +   +GADGM TGFT ASG+ +V SA Q  + 
Sbjct: 195 AAHPEYYRYYAQPAYTWNNITQRNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEE 295
           L   + G      R + +  L+  G     D +      K          S+ +P + ++
Sbjct: 255 LFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAANDKVGDAQVFGGKSSTLPLVVKK 314

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                               +          T +   
Sbjct: 315 DVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRL 351


>gi|90419583|ref|ZP_01227493.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336520|gb|EAS50261.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 500

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 139/268 (51%), Gaps = 1/268 (0%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +F  ++A+     +   +   E N      ++D N G V+  +  D    PASLTK+MT 
Sbjct: 25  RFAGVVAIG-AGMLLSAVGHVEANDKYAGFVIDANNGQVLYNDRADEYRYPASLTKMMTL 83

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y+ F  LK  +  ++  + +S  A+  PPS    K GST+T++ A+  L+ KSAND AV 
Sbjct: 84  YMTFDALKSGRISMSDKMPVSAYAAARPPSKIGLKAGSTLTVEEAVYSLVTKSANDAAVV 143

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           + E    +E  F   M   ++ +G+  T F NA+G+      TTARDMA L   ++  FP
Sbjct: 144 LGEFQAGSESAFAARMTAKARQIGMPKTTFRNANGLPDSEQKTTARDMATLGIALREHFP 203

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y   F  +    +G++  N N  +G   G DG+KTG+  ASGFN+V S  +  +SL+AV
Sbjct: 204 EYYKIFSTRSYSFRGRRLGNHNRVLGRVKGVDGIKTGYINASGFNLVTSIERDGKSLVAV 263

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDR 270
           ++G     +R+     LL+      + R
Sbjct: 264 VMGGRSGRSRDDHMVELLTRYLPKASTR 291


>gi|114705410|ref|ZP_01438318.1| penicillin-binding protein [Fulvimarina pelagi HTCC2506]
 gi|114540195|gb|EAU43315.1| penicillin-binding protein [Fulvimarina pelagi HTCC2506]
          Length = 467

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/289 (32%), Positives = 158/289 (54%), Gaps = 3/289 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  TG V++++       PAS TKLMTAY+    ++       TP+ +++ A+  
Sbjct: 66  ASIVVDLETGKVLSQSNATERRYPASTTKLMTAYLAMKAVEVGSMDWDTPVVMTRQAANE 125

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLS 148
            PS      GS M LD A++ L+VKSAND+A A+ ++    + + FV  MN T+  +G+ 
Sbjct: 126 APSKLDIPPGSIMRLDEAVRALLVKSANDVATAVGQTLGHGSSETFVAMMNRTAGLIGMR 185

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T F+NAHG+   G +++A+D+AIL+  I+ +FP+Y  +F  + +   GK   N N  +G
Sbjct: 186 DTQFINAHGLPGEGQHSSAKDLAILAMAIREEFPEYKDWFGTEAIVFNGKLMNNGNKLLG 245

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + GA+GMKTG+ CA GFN+V++  + +++LIAV+LGA     R  +SA L    F    
Sbjct: 246 RYDGAEGMKTGYICAGGFNLVSAVTRDNRTLIAVVLGANGTIERETLSAELYETAFK--A 303

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
           D       +K+           ++S  +C+ +      N ++ + +DK 
Sbjct: 304 DLDANYKTVKELPIVGDGKVTLDVSNYICSGEGRTARANDRVADRRDKS 352


>gi|38142311|dbj|BAD00958.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142319|dbj|BAD00962.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|332202728|gb|EGJ16797.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA41317]
          Length = 413

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/367 (20%), Positives = 150/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITAYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKKDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|38142345|dbj|BAD00975.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 413

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 147/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L       +        +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTVAAQDFNIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  LTVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNVPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDRMRAKLLEWGIKDATVVNTTGLNNETLGDNIYPGSNKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFDGITITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKTIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|332716423|ref|YP_004443889.1| penicillin-binding protein [Agrobacterium sp. H13-3]
 gi|325063108|gb|ADY66798.1| penicillin-binding protein [Agrobacterium sp. H13-3]
          Length = 372

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 124/310 (40%), Positives = 181/310 (58%), Gaps = 3/310 (0%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++ A+       ++ A         ++D  TG VI+       W PASLTKLMTAY+ FS
Sbjct: 14  LSAAIAIMTAGLVAAAPVANANPKMVVDVKTGKVISHQEAFRKWYPASLTKLMTAYIAFS 73

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K  K    T + +SK A++ P S   FK G  +T+D+ALKLL++KSANDIAVAIAE++
Sbjct: 74  QMKAGKLSPQTEVVMSKKAADQPASKMYFKPGQKLTMDSALKLLLIKSANDIAVAIAETI 133

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             T   FV  MN  ++ LG+S+T ++NA+G+   G YTTARD+A+L+  IK +FP+Y HY
Sbjct: 134 GGTSDNFVAQMNAQAQRLGMSSTRYINANGLPGKGQYTTARDLALLALIIKREFPEYAHY 193

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F ++G+    K Y N N  VG F GADGMKTGF CASGFN V+SA++  +S+I V+LGA 
Sbjct: 194 FSLEGVTTGKKDYANFNMLVGRFDGADGMKTGFICASGFNQVSSAVRNGRSVITVVLGAD 253

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               R   SA LL MG    + +      +  +     + EV ++S E+C  +   +   
Sbjct: 254 SLAGRTDQSADLLQMGLTAPSGQGVSLASLAPY---GDTAEVNDVSAEICNPKAAKVRSE 310

Query: 308 TQMKEAKDKE 317
           ++ +  +   
Sbjct: 311 SRDETGRMVI 320


>gi|16804791|ref|NP_466276.1| hypothetical protein lmo2754 [Listeria monocytogenes EGD-e]
 gi|224502838|ref|ZP_03671145.1| hypothetical protein LmonFR_09994 [Listeria monocytogenes FSL
           R2-561]
 gi|16412254|emb|CAD00967.1| lmo2754 [Listeria monocytogenes EGD-e]
          Length = 445

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNAPKLNTKVTMKEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|114569833|ref|YP_756513.1| Serine-type D-Ala-D-Ala carboxypeptidase [Maricaulis maris MCS10]
 gi|114340295|gb|ABI65575.1| Serine-type D-Ala-D-Ala carboxypeptidase [Maricaulis maris MCS10]
          Length = 450

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 100/267 (37%), Positives = 144/267 (53%), Gaps = 1/267 (0%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L+I++ ++        + A  N      +++ NTG V+     +    PASLTK+MT Y+
Sbjct: 15  LLILSCSLALLGLSTPAHA-NNSRYAAFVVEENTGVVLHSRRSEAERFPASLTKMMTLYM 73

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  L+  +  L  PI IS NA+   PS      GST++ +NA++ L+VKSAND+AVA+ 
Sbjct: 74  LFDALEAGEIGLNDPIRISANAANASPSRLGLAPGSTISAENAIRALVVKSANDVAVAVG 133

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L   E +F + M   +  +GL+ T F NA G+      TTARDMA L+  +  DFPQY
Sbjct: 134 ERLGGGESRFGELMTARAAEIGLTNTTFRNASGLPNSRQTTTARDMARLAIALHRDFPQY 193

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +     G+ Y N N  VG   G DG+KTG+  ASGFN+V SA + D  LI VI+
Sbjct: 194 FDYFNEETFRYNGRTYRNHNSLVGRVRGVDGLKTGYIRASGFNVVVSAERDDHRLITVIM 253

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRK 271
           G      R+  +  L+   F     R+
Sbjct: 254 GGPSAAARDAHAEELIEAAFATLEQRQ 280


>gi|241204780|ref|YP_002975876.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240858670|gb|ACS56337.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 517

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 3/261 (1%)

Query: 3   QFLVIIAMAM-LSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + L I+++A+ +  +    + AE     Y   ++D  TG+V+     D    PASLTK+M
Sbjct: 19  RLLAILSVAVTIVMVDSVNTDAEAANSKYAGIVVDAKTGNVLYSENADRLQYPASLTKMM 78

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A
Sbjct: 79  TLYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAA 138

Query: 121 VAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            A+ E L    +  F Q M   +  LG++ T + NA+G+      TTARD A L   ++ 
Sbjct: 139 TALGEMLGGGSEDRFAQLMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQ 198

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FPQY  YF  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S+
Sbjct: 199 HFPQYYGYFSTRAFKFGSRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSI 258

Query: 240 IAVILGALDRNTRNKVSASLL 260
           + V+LG      R+    +L+
Sbjct: 259 VGVVLGGASTPARDAQMRNLI 279


>gi|254827320|ref|ZP_05232007.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           N3-165]
 gi|254830810|ref|ZP_05235465.1| hypothetical protein Lmon1_05599 [Listeria monocytogenes 10403S]
 gi|254899789|ref|ZP_05259713.1| hypothetical protein LmonJ_08246 [Listeria monocytogenes J0161]
 gi|254913006|ref|ZP_05263018.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes J2818]
 gi|254937387|ref|ZP_05269084.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes F6900]
 gi|284800360|ref|YP_003412225.1| hypothetical protein LM5578_0105 [Listeria monocytogenes 08-5578]
 gi|284993545|ref|YP_003415313.1| hypothetical protein LM5923_0105 [Listeria monocytogenes 08-5923]
 gi|258599701|gb|EEW13026.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           N3-165]
 gi|258609993|gb|EEW22601.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes F6900]
 gi|284055922|gb|ADB66863.1| hypothetical protein LM5578_0105 [Listeria monocytogenes 08-5578]
 gi|284059012|gb|ADB69951.1| hypothetical protein LM5923_0105 [Listeria monocytogenes 08-5923]
 gi|293591008|gb|EFF99342.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes J2818]
          Length = 445

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAIDKGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLINDYPDVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V   + ++    K         K    +++     +
Sbjct: 317 KAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNAPKLNTKVTMKEKTIEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KGTEVGK 382


>gi|222086064|ref|YP_002544596.1| serine-type D-Ala-D-Ala carboxypeptidase protein [Agrobacterium
           radiobacter K84]
 gi|221723512|gb|ACM26668.1| serine-type D-Ala-D-Ala carboxypeptidase protein [Agrobacterium
           radiobacter K84]
          Length = 504

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 1/320 (0%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           + L  +A++  +      +        Y   ++D NTG+V+     D    PASLTK+MT
Sbjct: 26  KMLFGLAVSTATITMTVDASYAAGGSKYAGIVIDANTGNVLYSENADTLHYPASLTKMMT 85

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            Y+ F  L+  +  L TP+  SKNA+   P+      G ++T+  A+  ++ KSAND A+
Sbjct: 86  VYLTFEALESGRITLDTPVVFSKNAAMQAPTKLGIGTGRSVTVREAILGIVTKSANDAAM 145

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+ E L  +E  F + MN+ ++ LG++ T + N +G+      TTARD A L   ++  F
Sbjct: 146 ALGEMLGGSEDNFARMMNDKARMLGMTRTTYRNPNGLPNTAQMTTARDQARLGIALREHF 205

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           PQY   F      +  +  P  N  +G+  G DG+KTG+T A+G+N+  S     +S++ 
Sbjct: 206 PQYYGLFSTTSFRLGNRVIPGHNHLLGSVRGVDGIKTGYTRAAGYNLATSVKVDGRSIVG 265

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V+LG      R+     L++      + +   + +I     +  + +  +       + K
Sbjct: 266 VVLGGASTPARDNQMRKLIATYLPVASTKHISSNVIAQTVAETPNIQAASARMAAAGSVK 325

Query: 302 EIINYNTQMKEAKDKESHFI 321
                + ++++ +   S   
Sbjct: 326 ASKVESAEVEDDQQPSSAAA 345


>gi|253577333|ref|ZP_04854650.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251843233|gb|EES71264.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 469

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/344 (21%), Positives = 140/344 (40%), Gaps = 35/344 (10%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            ++    LL+  +G ++     + P  PAS+TK+MT Y+V   +K+ K      +T+ +N
Sbjct: 75  LEVSAAILLEPVSGQILLNVNGEQPLPPASMTKMMTEYIVAELVKQGKFSWDDVVTVGRN 134

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A++   S     +G   T++     + + SAND  VA+AE +  +E+ FV+ MN+ +K +
Sbjct: 135 AAQTIGSRIFLAEGDQHTVEELYTAMAIASANDATVALAEYVAGSEQAFVKMMNDEAKRM 194

Query: 146 GLSATHFMNAHGVVQHGH------------YTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           G+   HF N+ G+                   +A D AIL+  I TD P +  +  I+  
Sbjct: 195 GMKTAHFANSTGLDIADMPAEFRPTDGKETVMSALDAAILAKYIVTDHPDFTRFTTIQSK 254

Query: 194 EIKGK---KYPNTNWA-----------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + + +      N NW               + G DG+KTG T  +G     +A++    L
Sbjct: 255 KFRDRDTAPMVNLNWMLEANKNVTNFKQFAYEGLDGLKTGHTSNAGNCFTGTAVRNGMRL 314

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---------IIKDFYQQNLSNEVP 290
           I+V++G      R   +  +L  GF N   ++ +           +     +      V 
Sbjct: 315 ISVVMGTASDKARFVETRKVLDYGFNNFETKQIVPPKTTVTGTETVTVKKAKNTEVPVVT 374

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           + +      +    +         D+ +     ++ T +     
Sbjct: 375 DQAVSFVVPKGADTSAVEAKVTLADESNLTAPLKQGTKVGTVTY 418


>gi|116252287|ref|YP_768125.1| penicillin-binding protein/D-alanyl-D-alanine carboxypeptidase
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256935|emb|CAK08029.1| putative penicillin-binding protein/D-alanyl-D-alanine
           carboxypeptidase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 523

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 7/324 (2%)

Query: 3   QFLVIIAMAM-LSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + L I+++A+ +  +    + AE     Y   ++D  TG+V+     D    PASLTK+M
Sbjct: 26  RLLAILSVAVTIVMVDSVNADAEAANPKYAGIVVDAKTGNVLYSENADRLQYPASLTKMM 85

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND A
Sbjct: 86  TLYMTFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAA 145

Query: 121 VAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            A+ E L    +  F Q M   +  LG++ T + NA+G+      TTARD A L   ++ 
Sbjct: 146 TALGEMLGGGSEDRFAQLMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQ 205

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FPQY  YF  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S+
Sbjct: 206 HFPQYYGYFSTRAFKFGSRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSI 265

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           + V++G      R+    +L++      + R   + +I            P         
Sbjct: 266 VGVVMGGASTPARDAQMRNLIASYLPKASSRGGSSALIAQAAPAPAMIVTPAP----VQP 321

Query: 300 QKEIINYNTQMKEAKDKESHFIDF 323
           +K      T         +   D 
Sbjct: 322 KKAQQMAKTITAAQPPISAAAADL 345


>gi|293399410|ref|ZP_06643563.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Neisseria gonorrhoeae F62]
 gi|291609979|gb|EFF39101.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Neisseria gonorrhoeae F62]
          Length = 441

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 86  AAPTLQTPETLTA-AHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQ 144

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T++ D  LK +I   AND A+ +A+     + + F
Sbjct: 145 SEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENF 204

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+A+LS  +  DFP+Y   F IK  +
Sbjct: 205 VQQMNKEARRLGMKNTVFKNPTGLGREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFK 264

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR  
Sbjct: 265 FENIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESTETRAS 324

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 325 DNSKLLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 384

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 385 ILET---IQPIPAPVKKGQILGKI 405


>gi|228994104|ref|ZP_04154004.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
 gi|228765556|gb|EEM14210.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
          Length = 425

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 146/374 (39%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+ L I+ + +LS     ++ +        +     L D +TG ++ E  PD     AS
Sbjct: 3   MRKILSILLVFLLSFSSLGVTTSHAEEKIHIEAAAAILFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N          L   +K L    
Sbjct: 63  MSKLIVVYSVLEAIKEGKITWDTKVNISDYAYEISRNNEFSNVPFEKGLQYTVKELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  I T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNGENSLSARDMGILSRTIITKYPEILEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    SA +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 243 AYEGTDGLKTGSSDTAGYGFTISAKRGDLRLISVIIKTKSMDERFTESRELIDYGFNNFE 302

Query: 269 DRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE---SHFI 321
            +K    K N I     +++     P     V + +    +Y    +  K          
Sbjct: 303 KQKLKIDKNNTISVVKGKEDTVTVTPEKEITVISKKGSKPSYKVSTEADKSLAEDGKLVA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + + + +
Sbjct: 363 PIKKDAKVGSLVLE 376


>gi|194098190|ref|YP_002001238.1| Penicillin-binding protein [Neisseria gonorrhoeae NCCP11945]
 gi|291044211|ref|ZP_06569920.1| penicillin-binding protein [Neisseria gonorrhoeae DGI2]
 gi|193933480|gb|ACF29304.1| Penicillin-binding protein [Neisseria gonorrhoeae NCCP11945]
 gi|291011105|gb|EFE03101.1| penicillin-binding protein [Neisseria gonorrhoeae DGI2]
 gi|317163912|gb|ADV07453.1| putative D-alanyl-D-alanine carboxypeptidase / penicillin binding
           protein [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 441

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 11/324 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P L   ET     + ++D  +   ++    + P  PA+LT+LMTAY+VF  +K     
Sbjct: 86  AAPTLQTPETLTA-AHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQ 144

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKF 134
               + I ++A     S    + G T++ D  LK +I   AND A+ +A+     + + F
Sbjct: 145 SEENLKIPESAWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENF 204

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           VQ MN  ++ LG+  T F N  G+ + G  +TA+D+A+LS  +  DFP+Y   F IK  +
Sbjct: 205 VQQMNKEARRLGMKNTVFKNPTGLGREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFK 264

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +  +  N N  +      +G+K G T + G+N+  S     + ++ + LG+    TR  
Sbjct: 265 FENIEQNNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRAS 324

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS------EEVCTTQKEIINYNT 308
            ++ LL+         K           Q        +         +    KE      
Sbjct: 325 DNSKLLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQ 384

Query: 309 QMKEAKDKESHFIDFEKITLLKNK 332
            ++     +      +K  +L   
Sbjct: 385 ILET---IQPIPAPVKKGQILGKI 405


>gi|16801957|ref|NP_472225.1| hypothetical protein lin2897 [Listeria innocua Clip11262]
 gi|16415432|emb|CAC98123.1| lin2897 [Listeria innocua Clip11262]
          Length = 445

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 138/366 (37%), Gaps = 40/366 (10%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + +      +TIS+ A     +   SN   + G   ++    + + + SAN  A+
Sbjct: 77  LEAIDKGQLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYSVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+N+ G+                 +  TAR
Sbjct: 137 AISEKIAGSEKEFVDLMNKKAEELKLGDHQFVNSTGLNNEDLKGGQQVGGPTDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P  +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLIDDYPDVLKTASTTKKEFRKGTSDQIDMSNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    ++ V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVVTVVLHANGGGKGEHTSARFDETNKMLDYAFNNFKVKEVQ 316

Query: 274 NYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-SHFIDFEK 325
               K          +           + V     +  N      + K KE +     +K
Sbjct: 317 KAGSKVKIPSTIAVDKGKEDTVGLITKDAVKLVVPKNDNEPKLSTKVKLKEKTLEAPVKK 376

Query: 326 ITLLKN 331
            T +  
Sbjct: 377 NTEVGE 382


>gi|149002408|ref|ZP_01827342.1| penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae SP14-BS69]
 gi|237650527|ref|ZP_04524779.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae CCRI
           1974]
 gi|237822666|ref|ZP_04598511.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147759345|gb|EDK66337.1| penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae SP14-BS69]
          Length = 413

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 150/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                               +    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|56963593|ref|YP_175324.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
 gi|56909836|dbj|BAD64363.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
          Length = 380

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 82/353 (23%), Positives = 145/353 (41%), Gaps = 26/353 (7%)

Query: 1   MRQFLV------IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ +V       +     S +                L++ ++G V+       P   A
Sbjct: 1   MKKTIVHCLLVGFLFFFQSSEVLANEPATFPVSGQAAILMEQSSGRVLYSKNEHQPLKIA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MTA +     K     L   +T+SK A     S+     G  +TL + +  L+++
Sbjct: 61  SITKIMTAILAIESGK-----LDETVTVSKRAEGTEGSSLYLVAGEKLTLRDLVYGLMLR 115

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAIL 173
           S ND A+AIAE +  + + FV  MN  ++ +G+S T F N HG+     H ++A DMA+L
Sbjct: 116 SGNDAAIAIAEHVGGSVEGFVFLMNEKAEEIGMSNTLFRNPHGLDTDEDHLSSAYDMALL 175

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKK---YPNTNW-AVGTFLGADGMKTGFTCASGFNIV 229
           +     +  +Y      K    KG K   + N N      +  + G KTG+T  +   +V
Sbjct: 176 TQYAMGN-EEYRDISSTKDYRSKGDKVRVFHNKNRLLTEKYSYSTGGKTGYTKLAKRTLV 234

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNL 285
           ++A +    LIAV L A D          + + GF + +  + ++        D + +  
Sbjct: 235 STASKDGLDLIAVTLNAPDD---WDDHMHMFNWGFEHYSLERLVSKGKLKSKVDPFYEGN 291

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKD--KESHFIDFEKITLLKNKITKK 336
                ++   + T +K  +     +K      K +     E I  L   +  K
Sbjct: 292 LYVPYDVVYPLTTEEKSQLQSALTLKNPPKRGKFTDQELLEPIGKLAFTVDGK 344


>gi|218132659|ref|ZP_03461463.1| hypothetical protein BACPEC_00519 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992385|gb|EEC58388.1| hypothetical protein BACPEC_00519 [Bacteroides pectinophilus ATCC
           43243]
          Length = 436

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 114/270 (42%), Gaps = 18/270 (6%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             + T       L+D +TG ++ E        PAS TK+MT+ +           L   I
Sbjct: 23  PASPTISAGSAILIDADTGAILYEKDCHSRAYPASTTKIMTSLLAIENS-----SLDDVI 77

Query: 81  TISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           T SK   N+ ++  +N+  ++G   T++ AL   ++KSAN++A  I E +  +   F   
Sbjct: 78  TFSKAAANSYKWDEANTGTREGEQFTMEQALYATLLKSANEVAYGIGEYIAGSIPAFSDM 137

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----------HY 187
           MN  ++ LG   THF N +G+    HYTTA D+A++      +                 
Sbjct: 138 MNERARELGALNTHFNNPNGLSDTNHYTTAYDLAMIGRACFNNSTFMTISSSVNYSIPPT 197

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +        +++   N     +    G KTGFT  SG+ ++  A + D  LI V+    
Sbjct: 198 NKTAETRYFRQRHGMANSNGYQYEYFKGGKTGFTDESGYTLITFAQKDDMRLICVVFRES 257

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           D  +R   S +L   GF N       +  +
Sbjct: 258 DDASRYVDSKALFDYGFNNFKKAPISSSDV 287


>gi|121533591|ref|ZP_01665418.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosinus
           carboxydivorans Nor1]
 gi|121307582|gb|EAX48497.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermosinus
           carboxydivorans Nor1]
          Length = 384

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 83/321 (25%), Positives = 132/321 (41%), Gaps = 19/321 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    L+D  TG V+ +        PAS TK++TA +     +     L   + +S
Sbjct: 27  PKLNCRAAVLMDAKTGQVLYDKDMHKRSAPASTTKILTAIIAIESGR-----LDEVVRVS 81

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             A+    S+     G T+TL   +  L+++S ND AVAIAE L  + + F   MN  ++
Sbjct: 82  PRAAGTGGSSMNLYAGQTLTLRELVTGLMLRSGNDAAVAIAEHLAGSVEAFAAVMNKRAQ 141

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--------PQYMHYFQIKGLEI 195
            +G   +HF+N HG+   GH++TA D+A L+    T+          +    +  +    
Sbjct: 142 EIGAVNSHFVNPHGLTAPGHFSTAFDLAWLARYALTNPVFGQIVSTKETTIEWLDRSGRE 201

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           + +   NTN  +     ADG+KTG T  +G  +VASA +G+Q LIAV+L     + R   
Sbjct: 202 RDRNLRNTNKLLWMLEEADGVKTGTTSEAGPCLVASATRGNQRLIAVVLH---DHARWYN 258

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT---QKEIINYNTQMKE 312
           S  LL  GF N       +           + +   +   V T      E   Y     +
Sbjct: 259 SMMLLKHGFDNYDLYDYADEGAVLAAIPVENGQHGMVDAVVATPAALVVEAAAYPHVTVK 318

Query: 313 AKDKESHFIDFEKITLLKNKI 333
               E       +   +   I
Sbjct: 319 VDLPEKIKAPVYQGQKIGEII 339


>gi|15902820|ref|NP_358370.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae R6]
 gi|116516506|ref|YP_816254.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae D39]
 gi|1620468|emb|CAA67776.1| D,D-carboxypeptidase [Streptococcus pneumoniae]
 gi|15458372|gb|AAK99580.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae R6]
 gi|116077082|gb|ABJ54802.1| penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae D39]
          Length = 413

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 151/367 (41%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L  +   ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGVSTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                               +    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|316933618|ref|YP_004108600.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris DX-1]
 gi|315601332|gb|ADU43867.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris DX-1]
          Length = 576

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 17/325 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D N+G V++   PD   +PASLTK+MT Y++F  L++ K  L + + +S+ A
Sbjct: 54  PAFASIIVDGNSGAVLSATNPDSQRHPASLTKIMTLYLLFERLEQGKLSLDSEMEVSEFA 113

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           S   P+    + G  + +++A+K L+ +SAND AV IAE++  +E +F + M   ++ LG
Sbjct: 114 SGQAPTKLGLRPGQKLRVEDAIKGLVTRSANDAAVVIAETIGGSEAEFARMMTRKARALG 173

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T + NA G+      TTARD +IL   ++  FP+Y  YF       +G+   N N  
Sbjct: 174 MSRTVYRNASGLPNSEQVTTARDQSILGRAVQDRFPRYYRYFSTSVFAYRGQSIRNHNRL 233

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G+  G DG+KTG+T ASGFN+V S  +G++ L+ V+LG     +R+ +  +LL+     
Sbjct: 234 LGSVEGVDGIKTGYTRASGFNLVTSMHRGNRFLVGVVLGGRSGGSRDAIMRNLLAENLEK 293

Query: 267 KTDRKKINYIIK-----------------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
              R+ +  I +                    Q   + +V + + E            T+
Sbjct: 294 GATRRTVAAITERSSGSDDIEVAETSRSAPPVQVQGAVQVASAAPETVLPTPRPAAPLTR 353

Query: 310 MKEAKDKESHFIDFEKITLLKNKIT 334
              A + +     F   T+    + 
Sbjct: 354 SAAAPEPKPEPGPFNSGTIETKPLV 378


>gi|260587841|ref|ZP_05853754.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|331083843|ref|ZP_08332952.1| hypothetical protein HMPREF0992_01876 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542106|gb|EEX22675.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|330403268|gb|EGG82828.1| hypothetical protein HMPREF0992_01876 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 411

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/370 (18%), Positives = 134/370 (36%), Gaps = 41/370 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +   + +A  +  + FP L        E        L+D  +G V+ E   +     AS 
Sbjct: 8   KILSLFLAFYISMSAFPVLVAGKGDEPENLYALSAALIDGESGRVLYEKNGEEKRPMAST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT  +           L      S+ A+  P  +     G    + + L  L+++S 
Sbjct: 68  TKIMTCILTLE-----SGCLEEIAEASEKAARMPKVHLGASVGEKFYVKDLLYSLMLESH 122

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------HYTTAR 168
           ND AV +AE +  + + F + MN  ++ +G   T F+  +G+            H TTA 
Sbjct: 123 NDSAVILAEHVGGSVEGFAEKMNEKAREIGCEDTWFITPNGLDAKEEREGEEKVHETTAE 182

Query: 169 DMAILSWRIKT---DFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTG 219
           ++A +            +++   Q            +     N N  +    GA   KTG
Sbjct: 183 NLAQIMRYCVCLSPAREEFLKITQTPSYRFSDADGKREFSCQNHNAFLSMMEGAISGKTG 242

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKK---- 272
           FT  +G+  V +  +  ++LI  +LG    N    +   +  L+  G    +        
Sbjct: 243 FTAQAGYCYVGALQRDGKTLIVALLGCGWPNNKGYKWSDTRKLMEYGLNEYSLHSFDEIE 302

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-------SHFIDFEK 325
            +   K+   +N  N+  + + ++   +++       +KE ++ E             +K
Sbjct: 303 FSKCPKEIPVKNAKNKELDKNSKISLVREKGEEKKILLKEGEEIEVSYHGKKKLTAPVKK 362

Query: 326 ITLLKNKITK 335
              +     K
Sbjct: 363 GEKIGELRYK 372


>gi|167828274|ref|ZP_02459745.1| family S11 unassigned peptidase [Burkholderia pseudomallei 9]
          Length = 266

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 9/247 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + ++D ++G  +  +  D    PASLTKLMTAYV F  L+         +T++ +  
Sbjct: 1   AASWLVVDADSGKTLGAHNVDARREPASLTKLMTAYVAFDALERAALRWDDTVTVAADDI 60

Query: 88  EYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                         G  + + + ++ LIV SAND A+ +A+ +  +   F   MN+T++ 
Sbjct: 61  ASVGRDEARMYLTPGQRVRVRDLMRGLIVASANDAALVLAKRIGGSPAGFATMMNDTARR 120

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  +HF++  G+    HY+TA D++IL+ R+  DFP +  +   +          N N
Sbjct: 121 LGMRDSHFVSPSGITTPDHYSTAHDLSILAQRLNRDFPAFYTFSSQRHFAYGAFAKTNKN 180

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAI------QGDQSLIAVILGALDRNTRNKVSAS 258
             +G     DGMKTG T A+G+ +V +A       +    +IAV+LG      R   + +
Sbjct: 181 RLLGADPSVDGMKTGHTNAAGWCMVVTAKRPVGGARARHRVIAVLLGEPTEKQRLADARA 240

Query: 259 LLSMGFY 265
           LL  GF 
Sbjct: 241 LLDQGFA 247


>gi|331085110|ref|ZP_08334196.1| hypothetical protein HMPREF0987_00499 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407893|gb|EGG87383.1| hypothetical protein HMPREF0987_00499 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 402

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/363 (21%), Positives = 135/363 (37%), Gaps = 36/363 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE--TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L+ I   +L    P  +  E          L+D + G V+ E         AS TK
Sbjct: 1   MKKVLIGILTGVLLVSSPVSAKEEIEQLYAQSAVLMDADNGRVLFEKNGSEKKPMASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +           LT  + +S+NA+  P  +   +      L + L  L+++S ND
Sbjct: 61  IMTCILALEE-----GNLTDVVNVSENAARQPKVHLGMQMDEKFYLRDLLYSLMLESHND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----VQHGHYTTARDMAILS 174
            AVAIAE +  + + F   MN  +K +G   T+F+  +G+        H TTA D+A + 
Sbjct: 116 SAVAIAEHIGGSVQAFADKMNAKAKEIGCRDTYFITPNGLDASDDNGEHSTTAEDLARIM 175

Query: 175 WRIKTDFPQYMHYFQIKG---------LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
                  P+   +  I              +     N N  +    GA   KTGFT  +G
Sbjct: 176 SYCILKSPKKESFLSITQKGSYHFMDVDCHRSFSCQNHNAFLTMMDGALSGKTGFTGKAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKKI--NYIIKDF 280
           +  V +     ++ +  +LG    N    +   +  L++ G  N   R+       ++D 
Sbjct: 236 YCYVGALESRGRTFVVALLGCGWPNNKGYKWADTKRLMTYGMENYELREAFAGKEPLRDV 295

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMK-----------EAKDKESHFIDFEKITLL 329
             +       N+ E+     K     N+ ++             + +E      E+   L
Sbjct: 296 TVKAGIPTSGNLFEKAHVPVKIEKIQNSPVEVLLHREEEIETVVELQEEVQAPIERYEKL 355

Query: 330 KNK 332
              
Sbjct: 356 GTV 358


>gi|89896454|ref|YP_519941.1| hypothetical protein DSY3708 [Desulfitobacterium hafniense Y51]
 gi|89335902|dbj|BAE85497.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 428

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 13/282 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +++  A+     P              L+D  TG  +    PDHP+ PAS TK+M+A 
Sbjct: 16  LAMLLNFAVPVFGSPDKVPVPEISSEGAILIDITTGQTLFAKNPDHPYEPASTTKIMSAL 75

Query: 64  VVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +           L   +T      +      +    + G  +TL+N L  L++ SAND A
Sbjct: 76  IALEK-----GNLNDLVTAGPSVLDQELTQGTRIYLEPGEQVTLENLLYALLLNSANDAA 130

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE +    + F   MN  +K +G   T F N  G+   GH TTARD+A+++     +
Sbjct: 131 VAIAEHIGGDIQGFTDLMNAKAKEIGALNTSFKNPSGLSADGHLTTARDLAMIARFAYQN 190

Query: 181 F-PQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
              +     + K +    +       N N  + T     GMKTG+T ++G   VA+A + 
Sbjct: 191 PVFRDYVKTKTKIIPRNRENIPTEMYNINEFIWTEPTVTGMKTGYTSSAGNTYVATAERD 250

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
            ++L+ V+L +  + +       L   GF N  +        
Sbjct: 251 GRALLGVVLKSPSKTSIYTDMRKLFEYGFTNFENVVYKPKGT 292


>gi|307706421|ref|ZP_07643231.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus mitis SK321]
 gi|307618208|gb|EFN97365.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus mitis SK321]
          Length = 413

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++ +++++++ +     +        +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIILTLLSLSVIGSASTVAAQDFNIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSRKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    +++   ++     +  ++   D ++     E  T+
Sbjct: 301 KGDAYQDSKAPVQDGKEDAVTAVAKDDITLIERVGGQSSQTIQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|119384494|ref|YP_915550.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paracoccus denitrificans
           PD1222]
 gi|119374261|gb|ABL69854.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paracoccus denitrificans
           PD1222]
          Length = 568

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 3/264 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG  +     D   +PASLTK+MT Y+ F+ ++  +  L +   +S +A+  PPS  
Sbjct: 47  DARTGQEVYAQNADTRLHPASLTKMMTLYMAFNAIERGQVRLDSKFLVSSHAAAQPPSRL 106

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
             K G  + L   ++   VKSAND A  I E L  +E KF   M   ++ LG+  T+F N
Sbjct: 107 GLKPGQRIELRYLIRAAAVKSANDAATVIGEGLAGSEAKFAAQMTQMARALGMRNTNFRN 166

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGA 213
           A+G+   GHY+TARDM +L  R+  DFPQY   F  +  +       +TN     ++ GA
Sbjct: 167 ANGLTAEGHYSTARDMTVLGRRLFYDFPQYYSIFSRRSADAGIATVASTNKRFLDSYEGA 226

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTG+T A+GFN+ ASA +G + +IA +LG      RN+V A LL  GF     R + 
Sbjct: 227 DGIKTGYTRAAGFNLTASAKRGSKRIIATVLGGTSTAHRNQVMAQLLDAGFGKAPTRVRE 286

Query: 274 NYIIKD--FYQQNLSNEVPNISEE 295
                     ++ +   V     E
Sbjct: 287 VKPAPPQLVAEKKVRRTVQVARAE 310


>gi|303325746|ref|ZP_07356189.1| D-alanyl-D-alanine carboxypeptidase family protein [Desulfovibrio
           sp. 3_1_syn3]
 gi|302863662|gb|EFL86593.1| D-alanyl-D-alanine carboxypeptidase family protein [Desulfovibrio
           sp. 3_1_syn3]
          Length = 375

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 86/312 (27%), Positives = 147/312 (47%), Gaps = 8/312 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P +       +    L D +   ++ E   D    PASLTK+++ ++    +    
Sbjct: 35  AVAAPAVPPHGFVGVCSAILYDLDNDAILFEQNADEHIPPASLTKVLSMFLALDHISAGH 94

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           A   + + +S+ A+    S    +    + L+  L  + V S ND ++A+AE +  +   
Sbjct: 95  AAFDSVVPVSRAAARTGGSRMGLRNREQVPLEELLMGMAVSSGNDASMAVAEFVGGSAPA 154

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  ++ LG+  + F N HG+   G YTTARDM  L+      +P  + +     L
Sbjct: 155 FVNMMNVKARTLGMRDSRFRNPHGLPAQGQYTTARDMLTLARAYLRAYPWALKFHNTHVL 214

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
             +G+   N N  +G + GADG+KTG+  ASG+N++ +A +GD+ L+AVILGA D   R 
Sbjct: 215 NHQGRVTWNKNPLLGQYPGADGLKTGWVNASGYNLIFTASRGDKRLLAVILGAPDVRVRG 274

Query: 254 KVSASLLSMGFYNKTDRKK-----INYIIKDFYQQNLSNEVPNISEEVCTTQKEII---N 305
             +  LL  GF    ++       +  + ++ Y+ +L         +    Q E      
Sbjct: 275 TEACRLLDAGFQVCGNQAVSVAAALTQMPQENYRLDLRKTAHEAGRQYAQAQPEARKQAK 334

Query: 306 YNTQMKEAKDKE 317
           + TQ K AK+K+
Sbjct: 335 HGTQSKYAKNKK 346


>gi|296447357|ref|ZP_06889284.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylosinus
           trichosporium OB3b]
 gi|296255136|gb|EFH02236.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylosinus
           trichosporium OB3b]
          Length = 552

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 85/234 (36%), Positives = 138/234 (58%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D NTG  +     +   +PAS+TK+MT Y++F  L++ +  L +P+ IS +A
Sbjct: 80  PAFAAIVVDANTGRTLYGRSENELRHPASITKVMTLYLLFEQLEKGRLRLDSPLVISAHA 139

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +   P+      G T+ ++NA+K ++ KSANDIAVAIAE++   E  F + M   + +LG
Sbjct: 140 AAQSPTKLGLPPGQTIDVENAIKAVVTKSANDIAVAIAENIAGDEDAFAELMTRKAHSLG 199

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           ++ TH+ NA G+      TTARD+A+L   I+  FP Y  YF       +G+ + N N  
Sbjct: 200 MTRTHYANASGLPNDAQITTARDLAVLGRAIQDRFPHYYRYFSTYSFTYRGQAHRNHNHL 259

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           +G   G DG+KTG+T ASGFN+++S  +G + ++AV+LG     +R+ + A L+
Sbjct: 260 LGQIEGVDGIKTGYTRASGFNLLSSVRRGGRHIVAVVLGGTSGPSRDHIMAGLI 313


>gi|218663522|ref|ZP_03519452.1| probable serine-type D-Ala-D-Ala carboxypeptidase protein
           [Rhizobium etli IE4771]
          Length = 430

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 1/253 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               +  +    + A+T    Y   ++D  TG+V+     D    PASLTK+MT Y+VF 
Sbjct: 1   MALTVVLVDSVNAEAKTANPKYAGIVVDAKTGNVLYSENADRLQYPASLTKMMTLYMVFE 60

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND + A+ E L
Sbjct: 61  ALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDASTALGELL 120

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E +F Q M   +  LG++ T + NA+G+      TTARD A L   ++  FPQY  Y
Sbjct: 121 AGSEDRFAQLMTAKAHALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQHFPQYYGY 180

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +  +   +   + N  VG+  G DG+KTG+T A+GFN+V+S     +S+++V+LG  
Sbjct: 181 FSTRAFKFGSRTIRSHNRLVGSVRGVDGIKTGYTRAAGFNLVSSVQVDGKSIVSVVLGGT 240

Query: 248 DRNTRNKVSASLL 260
               R+    +L+
Sbjct: 241 SGAARDAQMRNLI 253


>gi|319407377|emb|CBI81028.1| Penicillin-binding protein [Bartonella sp. 1-1C]
          Length = 449

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++  + + + ++S  +   +  E         ++D NTG  + +        PASLTK+M
Sbjct: 13  KKVGIALTVLVISCSWAIATPKEAYPDKYAAIVIDANTGKTLFQANATLKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  +K  +    TPI IS  A+  PP+    K G T++++ A K LI KSAND+A
Sbjct: 73  TVYMIFEAIKNGRVTPNTPIPISNYAATRPPTKIGIKAGQTISIEAATKALITKSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI E L  +E+KF Q M   ++ LG+  THF NA G+    +Y+TA+DMA L+  ++  
Sbjct: 133 TAIGEYLGGSEQKFAQMMTIKARKLGMKNTHFANASGLPDTRNYSTAQDMATLALALRRH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F+    + +GK   N N  + T  G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPEQYKLFKTTHFKFRGKTINNHNTLIKTIKGVDGIKTGYTQMSGSNLATSMRINGRSIV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE---VPNISEEVC 297
           AV++G    NTRN   A+LL       +  +   Y++     +        +P     + 
Sbjct: 253 AVVMGGKSSNTRNIHMANLLKQYLPKASPVETNEYLVATARYKLPIGSATPIPLTKNNLI 312

Query: 298 TTQKEIINYNTQMKEAKDKESHFI 321
            +  EI +  T + E  +  +  +
Sbjct: 313 NSDDEISSLLTALTEQPNDSNTAV 336


>gi|167759042|ref|ZP_02431169.1| hypothetical protein CLOSCI_01389 [Clostridium scindens ATCC 35704]
 gi|167663449|gb|EDS07579.1| hypothetical protein CLOSCI_01389 [Clostridium scindens ATCC 35704]
          Length = 406

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/376 (19%), Positives = 140/376 (37%), Gaps = 45/376 (11%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHP 50
           MR+     +++A  +L   F   +         +        L+D ++G V+     +  
Sbjct: 5   MRKNRLLGILLACILLIQPFSAQAKESDAADEPDNLYAQSAVLMDADSGRVLFGKNENEA 64

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS TK+MT  +    ++E +      +  S  A+  P      +      L + L  
Sbjct: 65  KPMASTTKIMTCIMALENMEEGQI-----VAASDYAASQPKVRLGVRGKEEYYLKDILYS 119

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTT 166
           L+++S ND AV +AE +  + + F   MN  ++ +G   T+F+  +G+  +     H TT
Sbjct: 120 LMLESHNDSAVVVAEGIAGSVEAFAGLMNQKAEEIGCKDTYFVTPNGLDAYDDGGTHSTT 179

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK---------YPNTNWAVGTFLGADGMK 217
           ARD+A +      + P+   + +I G +                N N  +    GA   K
Sbjct: 180 ARDLASIMRYCIMESPKKDEFLEITGTKNYHFTNVAGDREFSCNNHNAFLDMMDGALTGK 239

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKK-- 272
           TGFT  +G+  V +  +  ++ I  +L     N    + K + +L+  G  N   R    
Sbjct: 240 TGFTGDAGYCYVGALRKDGKTFIVALLACGWPNNKDYKWKDTKALMEYGLANYEYRNVWE 299

Query: 273 ------------INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                       ++       +  +   V    +EV    K       + K     ++  
Sbjct: 300 EPALSQIRVQEGVSAGNPYKRESKVQAVVKGGEKEVNALLKADEKAEVKRKVKDHLKAPL 359

Query: 321 IDFEKITLLKNKITKK 336
              +K+  ++  +  K
Sbjct: 360 KKGQKVGEIQYLLEGK 375


>gi|148256123|ref|YP_001240708.1| putative D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium sp.
           BTAi1]
 gi|146408296|gb|ABQ36802.1| putative D-alanyl-D-alanine carboxypeptidase (Peptidase
           S11)(DD-carboxypeptidase) [Bradyrhizobium sp. BTAi1]
          Length = 590

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 91/252 (36%), Positives = 143/252 (56%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D N+G V+    PD   +PASLTK+MT Y++F  L   K  L T + +S++A
Sbjct: 57  PAFASIVVDGNSGAVLTATNPDALRHPASLTKIMTLYLLFERLDSGKMKLDTEMPVSEHA 116

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           SE  P+    + G T+ +++A+K L+ +SAND AV IAE++   E +F + M   ++ LG
Sbjct: 117 SEQSPTKLGLRPGQTIRVEDAIKGLVTRSANDAAVVIAEAIGGDEDEFAKMMTRKARALG 176

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T ++NA G+      TTARD +IL   I+  FP+Y  YF       +G+   N N  
Sbjct: 177 MSRTTYVNASGLPADEQITTARDQSILGRAIQDRFPRYYRYFSTVVFNYRGQSIRNHNHL 236

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G   G DG+KTG+T ASGFNIV S  +G++ L+ V+LG     +R+ +  +LL+     
Sbjct: 237 LGNVEGIDGIKTGYTRASGFNIVTSLRRGNRHLVGVVLGGRSGGSRDAIMRNLLAENLEK 296

Query: 267 KTDRKKINYIIK 278
              R+ +  I +
Sbjct: 297 GATRRTVAAIGE 308


>gi|192291929|ref|YP_001992534.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris TIE-1]
 gi|192285678|gb|ACF02059.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris TIE-1]
          Length = 585

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 91/268 (33%), Positives = 147/268 (54%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D NTG V+    PD   +PASLTK+MT Y++F  L++ K  L + + +S++A
Sbjct: 55  PAFASIIVDGNTGAVLTATNPDSLRHPASLTKIMTLYLLFEKLEQGKLSLDSEMEVSEHA 114

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           SE  P+    + GST+ +++A+K L+ +SAND AV IAE++  +E  F + M   ++ LG
Sbjct: 115 SEQAPTKLGLRPGSTLRVEDAIKGLVTRSANDAAVVIAETVGGSESDFAKLMTRKARALG 174

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T + NA G+      TTARD +IL   I+  FP+Y  YF       +G    N N  
Sbjct: 175 MSRTVYRNASGLPNDEQVTTARDQSILGRAIQDRFPRYYRYFATSVFNYRGHAIRNHNRL 234

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G   G DG+KTG+T ASGFN+V S  +G++ L+ V+LG     +R+ +  +LL+     
Sbjct: 235 LGNVEGVDGIKTGYTRASGFNLVTSMHRGNRFLVGVVLGGRSGGSRDAIMRNLLAENLEK 294

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISE 294
              R+ +  I +     + +    +   
Sbjct: 295 GATRRTVAAISERSSGSDETEVAEDTRP 322


>gi|39936213|ref|NP_948489.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris CGA009]
 gi|39650068|emb|CAE28591.1| possible D-alanyl-D-alanine carboxypeptidase [Rhodopseudomonas
           palustris CGA009]
          Length = 585

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 91/268 (33%), Positives = 147/268 (54%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D NTG V+    PD   +PASLTK+MT Y++F  L++ K  L + + +S++A
Sbjct: 55  PAFASIIVDGNTGAVLTATNPDSLRHPASLTKIMTLYLLFEKLEQGKLSLDSEMEVSEHA 114

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           SE  P+    + GST+ +++A+K L+ +SAND AV IAE++  +E  F + M   ++ LG
Sbjct: 115 SEQAPTKLGLRPGSTLRVEDAIKGLVTRSANDAAVVIAETVGGSESDFAKLMTRKARALG 174

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T + NA G+      TTARD +IL   I+  FP+Y  YF       +G    N N  
Sbjct: 175 MSRTVYRNASGLPNDEQVTTARDQSILGRAIQDRFPRYYRYFATSVFNYRGHAIRNHNRL 234

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +G   G DG+KTG+T ASGFN+V S  +G++ L+ V+LG     +R+ +  +LL+     
Sbjct: 235 LGNVEGVDGIKTGYTRASGFNLVTSMHRGNRFLVGVVLGGRSGGSRDAIMRNLLAENLEK 294

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISE 294
              R+ +  I +     + +    +   
Sbjct: 295 GATRRTVAAISERSSGSDETEVAEDTRP 322


>gi|150015409|ref|YP_001307663.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149901874|gb|ABR32707.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 411

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 131/348 (37%), Gaps = 31/348 (8%)

Query: 1   MRQF------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++       L +             +           L+D +TG V+     +    PA
Sbjct: 1   MKRIFKTFNILFLFLFCFTYTSVQAETQPPQINAEGCALIDASTGQVLYGKNEEKVLEPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S TK+MTA +     K     L   +T+ ++ ++   +     KG  +T+ + L  L+++
Sbjct: 61  STTKVMTAIITLEKCK-----LDDEVTVQEDFTKIDGTAVGLLKGDVVTVRDLLLGLLLE 115

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND A A+A+ +  + + F + MN  +K LG   T+F N  G+    H TTA D+A+  
Sbjct: 116 SGNDCANALADHISGSTEAFSKLMNEKAKELGALHTNFKNPSGLPDPEHTTTAHDLALFL 175

Query: 175 WRIKTDFP------QYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCA 223
                +           +   +K    K     N N+         +  A   K G+T  
Sbjct: 176 REAINNKDYVQLSTTPNYTITLKNNPSKTIVLNNKNYMINKNSRYYYPFALCGKNGYTTK 235

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S    VA+A +    L+A  L ALD++       ++L+ GF N +         +     
Sbjct: 236 SNHTYVAAAEKNGHVLVASFLNALDKDQNFHDMQAVLNYGFDNYSLVHLYQKGDEVSQY- 294

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQM-KEAKDKESHFIDFEKITLLK 330
                   I+  +        + +  + K  +D  S  I  +   L K
Sbjct: 295 -------KITNNLTIPVMASRDIDYDVPKGQEDSVSSEIKIQDQDLSK 335


>gi|168484754|ref|ZP_02709699.1| penicillin-binding protein 3 [Streptococcus pneumoniae CDC1873-00]
 gi|172042076|gb|EDT50122.1| penicillin-binding protein 3 [Streptococcus pneumoniae CDC1873-00]
          Length = 413

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKTPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|254501213|ref|ZP_05113364.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
 gi|222437284|gb|EEE43963.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
          Length = 473

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 98/287 (34%), Positives = 155/287 (54%), Gaps = 4/287 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  L I+A A+   +    + AE      Y L+D   G V+ +      W PASLTK+MT
Sbjct: 9   RSALPILAAALGFFLMAAPARAEIGT---YILVDARNGAVVDQKNATRKWYPASLTKMMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           AYV F  ++E +  L + +  SKN++  PPS   FK G+  T+D ALK++++KSAND++V
Sbjct: 66  AYVTFKAIREGRVALDSAVVQSKNSAAEPPSKMGFKVGTKFTIDTALKIILIKSANDVSV 125

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+ E++  +E  F+  MN  ++ LG++ T F N HG+  +   TTARDMAIL+  ++ DF
Sbjct: 126 ALGEAVSGSENAFLAEMNAEARRLGMTNTRFTNPHGLPDNRQVTTARDMAILAMALRKDF 185

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           P+   +++  G+    K   + N        GA+GMKTG+ C SGFN+ +S  +  ++LI
Sbjct: 186 PEAREFYKHPGIRFGKKTLRSANREFLLRVPGANGMKTGYICNSGFNVASSVTRRGRTLI 245

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           A+I+GA     R   +  L   GF   +  + +  +           
Sbjct: 246 AIIMGASSGLERTAFARQLFDEGFRKGSRGQNVKSLSGSSGNPPADG 292


>gi|121597580|ref|YP_989692.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei SAVP1]
 gi|167002262|ref|ZP_02268052.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei PRL-20]
 gi|121225378|gb|ABM48909.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei SAVP1]
 gi|243062001|gb|EES44187.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei PRL-20]
          Length = 511

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERAALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPNHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|153938417|ref|YP_001392255.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum F str. Langeland]
 gi|152934313|gb|ABS39811.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum F str. Langeland]
          Length = 415

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 79/348 (22%), Positives = 137/348 (39%), Gaps = 25/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+     I  ++L     F ++A                 L+D+ TG +I    PD P+ 
Sbjct: 1   MKLIFYKILCSILLFSLFFSNVAWAKDSKPNLKIAADGVVLMDSKTGKIIYSKNPDKPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MTA +        +  L   +TI +       S     +G  + + + L  L+
Sbjct: 61  PASTTKIMTALLTLE-----RGNLDDIVTIGRKPPLAEGSKIYILEGEKIKVRDLLYGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A A+AE L  +   F + MN  +K LG + T+F+N  G+    H T+ARD+AI
Sbjct: 116 LASANDCAEALAEYLSGSLDNFSKDMNKRAKELGCTNTNFVNPSGLYNDKHRTSARDLAI 175

Query: 173 LSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFT 221
           +   +              +         + +   N N      +   + G +G KTG+T
Sbjct: 176 IMNELVKQPEYSKIATTLSYNIPPTNKSKEKRPLWNENKLIQKHSNFYYKGCEGGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S  + VAS  + +  +I  ++           S  L + GF N T             
Sbjct: 236 VQSDHSYVASVNKDNHRIIVALVH-DKEKNFFDDSVKLFNYGFNNFTLDLLYPKDSYVTT 294

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             N + +VP  + +     K   +      + ++     + F+K  ++
Sbjct: 295 YTNDNLKVPLYASKDFYYLKPKDDNMAPDLKLENTNLKNLKFKKGDVV 342


>gi|219667694|ref|YP_002458129.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
 gi|219537954|gb|ACL19693.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
          Length = 423

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 81/292 (27%), Positives = 126/292 (43%), Gaps = 20/292 (6%)

Query: 1   MRQFLVII-AMAMLSNIF------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR   V+  A+AML N        P              L+D  TG  +    PDHP+ P
Sbjct: 1   MRLIAVLFTALAMLLNFAVPVFGSPDKVPVPELSSEGAILIDITTGQTLFAKNPDHPFEP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNALKL 110
           AS TK+M+A +           L   +T      +      +    + G  +TL+N L  
Sbjct: 61  ASTTKIMSALIALEK-----GNLNDLVTAGPSVLDQELTQGTRIYLEPGEQVTLENLLYA 115

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L++ SAND AVAIAE +    + F   MN  +K +G   T F N  G+ + GH TTARD+
Sbjct: 116 LLLNSANDAAVAIAEHIGGDVQGFTDLMNAKAKEIGALNTSFKNPSGLSEDGHLTTARDL 175

Query: 171 AILSWRIKT-----DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           A+++          D+ +       +  E    +  N N  + T     GMKTG+T ++G
Sbjct: 176 AMIARFAYQNPVLRDYVKTKTKIIPRNRENIPTEMYNINEFIWTEPTVTGMKTGYTTSAG 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
              VA+A +  ++L+ V+L +  + +      +L   GF N  +        
Sbjct: 236 NTYVATAERDGRALLGVVLKSPSKTSIYTDMRNLFEYGFTNFENVVYKPKGT 287


>gi|298291483|ref|YP_003693422.1| serine-type D-Ala-D-Ala carboxypeptidase [Starkeya novella DSM 506]
 gi|296927994|gb|ADH88803.1| Serine-type D-Ala-D-Ala carboxypeptidase [Starkeya novella DSM 506]
          Length = 570

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 94/340 (27%), Positives = 162/340 (47%), Gaps = 20/340 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---TNKLPYY----------------TLLDTNTGHV 41
           MR  + ++A++++       +  +   T +                     ++D NTG +
Sbjct: 12  MRVAVAVLAISLVGAGVAEAASKKKKRTARNKAAVTRTVASGDWHRGYSDIIIDANTGRI 71

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           + E   D   +PAS+TK+MT Y++F  L+  K  L TP+ +S  A+   PS    K GST
Sbjct: 72  LHEQNADALRHPASVTKVMTLYLLFEQLQAGKMRLNTPLRVSAYAASQQPSKLGVKPGST 131

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           + +++A++ LI +SAND+AV +AE++      F   M   ++ LG+S T F N +G+   
Sbjct: 132 IVVEDAIQALITRSANDVAVVVAENISGDASTFAALMTRRARQLGMSRTTFRNPNGLPNP 191

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              TTARD+A L   I+  FP+Y  YF+ +    +G+   N N   G   G DG+KTG+T
Sbjct: 192 QQVTTARDLATLGRAIQERFPKYYAYFETRSFMYRGQAIRNHNRMFGRINGVDGIKTGYT 251

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF-YNKTDRKKINYIIKDF 280
            ASGFN++ S  Q  + +I V++G     +R+    +LLS     +   R+++  +    
Sbjct: 252 NASGFNLLTSVKQNGRYVIGVVMGGASAASRDNRMVALLSDAMPKSYAGRQQVARMDSVP 311

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                 + V  ++          +      +E   K +  
Sbjct: 312 SGAADDDVVTPVALAAAEPTPTPVAAPAVAQEVARKPATI 351


>gi|153009485|ref|YP_001370700.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
 gi|151561373|gb|ABS14871.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
          Length = 404

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 4/256 (1%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +I ++A+ +++    +         + + D ++G ++ ++  +    PASL K+MT Y+ 
Sbjct: 11  LIASLALGASVLCTSAAMANT---SWVVFDADSGRILGQDDANVQRAPASLAKMMTLYLA 67

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  LK  +      + +SKNA+         K G T+T+ +A+  +I+ SAND A  + E
Sbjct: 68  FEGLKTGRLHWDDAMPVSKNAAAKVRMKLWLKPGETITVRDAINGMIIVSANDAATVMGE 127

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQY 184
            +  +E  F + M   ++ +G+ +T F+N  G+       TTARDMA+L   ++ DFP+ 
Sbjct: 128 YIAGSEAAFGRLMTQRARQIGMKSTFFVNPSGLTAKSTQLTTARDMAVLGMSLRRDFPEQ 187

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              F  +    + +     N  +  + G DG+KTG+T  SG+N+V+SA+  D+ L+ V+L
Sbjct: 188 YELFSQRSFTFRDRVRNGHNNLMYRYQGVDGIKTGYTDVSGYNLVSSAVINDKHLVGVVL 247

Query: 245 GALDRNTRNKVSASLL 260
           GA     R+   A LL
Sbjct: 248 GAGSARQRDDQMAKLL 263


>gi|114706870|ref|ZP_01439770.1| Serine-type D-Ala-D-Ala carboxypeptidase [Fulvimarina pelagi
           HTCC2506]
 gi|114537818|gb|EAU40942.1| Serine-type D-Ala-D-Ala carboxypeptidase [Fulvimarina pelagi
           HTCC2506]
          Length = 387

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/321 (23%), Positives = 131/321 (40%), Gaps = 10/321 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                P   + D  TG V+ E   D    PASL KLMT  VVF  L++         T+S
Sbjct: 28  FETSAPTAFMKDFATGRVLFEKNADMEVEPASLAKLMTIAVVFDELEKGTISRDQTFTVS 87

Query: 84  KNASEYPPSN-----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ++A     +N          G  +++D+ LK +I++S ND  + IAE +  +   F   M
Sbjct: 88  EDAWRTGGANSGGSTMFLPLGGEVSVDDLLKGIIIQSGNDATIVIAEGIAGSVDAFADMM 147

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ +GL+ + F N+ G+     + T RD+  L+  +  ++P+    F  +     G 
Sbjct: 148 NKRAQAIGLTHSRFGNSSGLPHPDSHVTMRDLVTLAEHLIREYPEEYPAFAEESYRYNGI 207

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              N N  +    GADG+KTG T A+G+ +VASA    + ++  +      N R + S  
Sbjct: 208 TQNNRNPLLSL--GADGLKTGHTQAAGYGLVASAEADGRRVVFALSRMASSNERARESQR 265

Query: 259 LLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           ++  G  +  +               +  + +EV   S E         + +   +   D
Sbjct: 266 MMEFGLQDFEEVTLAEEGETVATVPVRGGVLDEVALRSPERVALLVPTGSLSDARRVIVD 325

Query: 316 KESHFIDFEKITLLKNKITKK 336
                    +   L     K+
Sbjct: 326 NGPVEAPVTEGQRLGWLQIKR 346


>gi|225420336|ref|ZP_03762639.1| hypothetical protein CLOSTASPAR_06680 [Clostridium asparagiforme
           DSM 15981]
 gi|225041022|gb|EEG51268.1| hypothetical protein CLOSTASPAR_06680 [Clostridium asparagiforme
           DSM 15981]
          Length = 595

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 135/333 (40%), Gaps = 29/333 (8%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAE-----TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   + +A A+ +      +        T +     +++  TG V+     D P+ PA
Sbjct: 1   MKRLFALCLAFALCAVPMTAWAAPAWPSGVTIQADGGIVMEAGTGTVLYGKNMDQPYYPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK++TA +V       + +  +   +     E   S++   +G  +T+ + L  L++ 
Sbjct: 61  SITKILTALIVIESCDLDEIVTFSHDAV--YNVEADSSSAGIDEGDQLTVRDCLYALLLA 118

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAN+ A A+AE +  T + F   MN  + +LG + +HF N  G+    HYTTA DMA ++
Sbjct: 119 SANESANALAEHVSGTREAFADLMNQRAASLGCTGSHFANPSGLNDENHYTTAHDMAKIA 178

Query: 175 WRIKTDFPQYMHYFQIK-----------------GLEIKGKKYPNTNWAVGTFLGADGMK 217
                +                                   K  N N     + GA   K
Sbjct: 179 QAAIQNPTFVEICGSRTYRLPNMKRAPAEKFPDGYPIANHHKMWNRN-DAAYYNGAFCGK 237

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG+T  +G  +V  A +GD +LIAV+L      T    + ++L  GF N    K I+   
Sbjct: 238 TGYTSLAGNTLVTCAKRGDMTLIAVVLN--GHLTHYTDTKAMLDFGFGNFQSLK-ISEFE 294

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             +   +    +  ++ +   +     +    +
Sbjct: 295 TTYTSLDNDMTIAGMTAKDTISLDLDEDSRIVI 327


>gi|194396776|ref|YP_002037508.1| penicillin-binding protein 3, D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae G54]
 gi|194356443|gb|ACF54891.1| penicillin-binding protein 3, D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae G54]
          Length = 413

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 148/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +            +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFARMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|149010495|ref|ZP_01831866.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP19-BS75]
 gi|147764976|gb|EDK71905.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP19-BS75]
          Length = 413

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 148/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +       ++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEVSNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKTPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|188586265|ref|YP_001917810.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350952|gb|ACB85222.1| Serine-type D-Ala-D-Ala carboxypeptidase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 387

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 31/350 (8%)

Query: 6   VIIAMAMLSNIFPFLSIAET--------------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           +II + +L+N     ++ E                      L+D  TG V+ E       
Sbjct: 16  LIIGLLVLANSNLTNALPEEDLYELKEIEELEEEITATSACLVDVKTGRVLYEQNSHKQL 75

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS TK+MTA +        +  L   +T S+ ASE   S+   ++   +TL+  L  L
Sbjct: 76  PMASTTKVMTALLSLE-----RGNLNEVVTASEAASEVEGSSIYLQEDEQLTLEAMLYGL 130

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND A AIAE +    + F ++M + +++LG   T+F N HG+    HY+TA DM 
Sbjct: 131 MLESGNDAAHAIAEHIDGDIESFARNMTDRAESLGAKNTNFQNPHGLPSDNHYSTAYDMT 190

Query: 172 ILSWRIKTDFP------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           I++                      +  +   +   N N  +     ADG+KTG+T A+G
Sbjct: 191 IIAKEALKKSKFAEIVSTKEKLIPWEKGDADWRYLNNDNKLLDELSEADGVKTGWTEAAG 250

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQ 282
             ++ S  + ++ ++  +L A       + + +LL  G Y   +++ I       +   +
Sbjct: 251 RCLIFSGTKDERQVVGTVLKAP---KMYQDAENLLEYGIYQFNEKQVIQKGQLVREVPVE 307

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +   + VP ++        E   Y       K  +      EK   +   
Sbjct: 308 KGKYSTVPVVAGSEIVLPLESQEYRDLNYHIKIPKKLQAPLEKGEEIGTL 357


>gi|53722262|ref|YP_111247.1| peptidase [Burkholderia pseudomallei K96243]
 gi|52212676|emb|CAH38706.1| family S11 unassigned peptidase [Burkholderia pseudomallei K96243]
          Length = 333

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|315644241|ref|ZP_07897411.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           vortex V453]
 gi|315280616|gb|EFU43905.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           vortex V453]
          Length = 330

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 28/293 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +++L ++ + +++     + I                  L+D NTG ++     D P  P
Sbjct: 3   KRWLWLVMVLLITVPIGAVVIGNIERAGFRPKVDARAVVLMDLNTGRILLSENGDIPLPP 62

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS++KLMT  V+   +K  K      + IS  AS         K G  +T+    + + V
Sbjct: 63  ASMSKLMTELVILDDIKTGKKSWDDEVQISDTASGVSGIKIALKSGEFLTVRELFQSITV 122

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL------------SATHFMNAHGVVQH 161
            SAND AVA+AE    +E+ FVQ MN  +K +G+             +    +     + 
Sbjct: 123 YSANDAAVALAEHFAGSEEAFVQKMNAKAKEIGMSSSTHFVNASGVESHTDNDQEWSSER 182

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWA------VGTFLGA 213
               TA D A L+  +    P  +        +I G+     NTNW         ++ G 
Sbjct: 183 ETVMTAEDTAKLAAHLIKSHPDILSTSSKTQTKISGRNLYLSNTNWMLPSLGGPYSYEGT 242

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           DG+KTG+T  +G+    +A +    LIAV++G   +  R + +  L   GF  
Sbjct: 243 DGLKTGYTVNAGYCFTGTAEKQGSRLIAVVMGTESKEARFEETRKLFDYGFAK 295


>gi|168490961|ref|ZP_02715104.1| penicillin-binding protein 3 [Streptococcus pneumoniae CDC0288-04]
 gi|221231651|ref|YP_002510803.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae ATCC
           700669]
 gi|225854380|ref|YP_002735892.1| penicillin-binding protein 3 [Streptococcus pneumoniae JJA]
 gi|38142283|dbj|BAD00944.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142293|dbj|BAD00949.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142313|dbj|BAD00959.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142321|dbj|BAD00963.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142323|dbj|BAD00964.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142343|dbj|BAD00974.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142355|dbj|BAD00980.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|66817132|gb|AAY56862.1| penicillin-binding protein 3 [Streptococcus pneumoniae ATCC 700669]
 gi|183574667|gb|EDT95195.1| penicillin-binding protein 3 [Streptococcus pneumoniae CDC0288-04]
 gi|220674111|emb|CAR68630.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pneumoniae ATCC 700669]
 gi|221327902|gb|ACM17687.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327910|gb|ACM17691.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|225723264|gb|ACO19117.1| penicillin-binding protein 3 [Streptococcus pneumoniae JJA]
          Length = 413

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKTPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|15900755|ref|NP_345359.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           TIGR4]
 gi|148993686|ref|ZP_01823133.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP9-BS68]
 gi|149026353|ref|ZP_01836508.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP23-BS72]
 gi|168485819|ref|ZP_02710327.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           CDC1087-00]
 gi|168490307|ref|ZP_02714506.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP195]
 gi|168493026|ref|ZP_02717169.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           CDC3059-06]
 gi|182683787|ref|YP_001835534.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           CGSP14]
 gi|303255291|ref|ZP_07341362.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS455]
 gi|303260392|ref|ZP_07346361.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP-BS293]
 gi|303262749|ref|ZP_07348687.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265038|ref|ZP_07350952.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS397]
 gi|303267132|ref|ZP_07353001.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS457]
 gi|303269372|ref|ZP_07355143.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS458]
 gi|307127577|ref|YP_003879608.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           670-6B]
 gi|14972344|gb|AAK74999.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           TIGR4]
 gi|38142277|dbj|BAD00941.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142279|dbj|BAD00942.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142287|dbj|BAD00946.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142305|dbj|BAD00955.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142307|dbj|BAD00956.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142309|dbj|BAD00957.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142325|dbj|BAD00965.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142329|dbj|BAD00967.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142347|dbj|BAD00976.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142349|dbj|BAD00977.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|55167245|dbj|BAD67449.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|66817134|gb|AAY56863.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|66817138|gb|AAY56865.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|147927766|gb|EDK78789.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP9-BS68]
 gi|147929315|gb|EDK80314.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP23-BS72]
 gi|182629121|gb|ACB90069.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           CGSP14]
 gi|183570937|gb|EDT91465.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           CDC1087-00]
 gi|183571353|gb|EDT91881.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP195]
 gi|183577020|gb|EDT97548.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           CDC3059-06]
 gi|221327900|gb|ACM17686.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327904|gb|ACM17688.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327908|gb|ACM17690.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327914|gb|ACM17693.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327916|gb|ACM17694.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327922|gb|ACM17697.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327924|gb|ACM17698.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|301801696|emb|CBW34402.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pneumoniae INV200]
 gi|302597760|gb|EFL64835.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS455]
 gi|302636071|gb|EFL66568.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638427|gb|EFL68893.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP-BS293]
 gi|302641090|gb|EFL71466.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS458]
 gi|302643340|gb|EFL73618.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS457]
 gi|302645398|gb|EFL75631.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           BS397]
 gi|306484639|gb|ADM91508.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           670-6B]
 gi|332077286|gb|EGI87748.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA17545]
 gi|332204028|gb|EGJ18095.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA47368]
          Length = 413

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|225858672|ref|YP_002740182.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           70585]
 gi|225720794|gb|ACO16648.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           70585]
          Length = 413

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKTFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|167819885|ref|ZP_02451565.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 91]
          Length = 309

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|167915042|ref|ZP_02502133.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 112]
          Length = 333

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|239906564|ref|YP_002953305.1| putative D-alanyl-D-alanine carboxypeptidase [Desulfovibrio
           magneticus RS-1]
 gi|239796430|dbj|BAH75419.1| putative D-alanyl-D-alanine carboxypeptidase [Desulfovibrio
           magneticus RS-1]
          Length = 364

 Score =  167 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 2/251 (0%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
             FP  +      +    + +  +G  +     D P  PASLTK+MT YVVF  +   KA
Sbjct: 24  TAFPAKNAG-KLAVKSALVTEYGSGKTLYSQDADRPIPPASLTKVMTMYVVFDLVASGKA 82

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                I +S+ A     S    + G  +TLD  ++ + V S ND  +A+AE        F
Sbjct: 83  SFADRIKVSRGADRTGGSTMGLRAGEIVTLDELMRGMAVASGNDACIAVAEHFGGV-PTF 141

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  ++ LG++ T F N +G+   G YTTARD+  L+      +PQ + Y     + 
Sbjct: 142 VGLMNRKARELGMTGTTFKNPNGLPAAGQYTTARDLTKLAVSYLRHYPQALRYHSTTEIN 201

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
             G  + NTN  + ++ GADG+KTG+  ASG+NI+A+A +GD  +IAV+LG   +  RN+
Sbjct: 202 HNGAVHGNTNRLLASYDGADGIKTGYVDASGYNIIATAKRGDTRVIAVVLGGRTKQVRNR 261

Query: 255 VSASLLSMGFY 265
            +  +L   F 
Sbjct: 262 EAVRILDASFS 272


>gi|225856538|ref|YP_002738049.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           P1031]
 gi|38142339|dbj|BAD00972.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|225726015|gb|ACO21867.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           P1031]
          Length = 413

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 150/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L  +   ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGVSTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|253576372|ref|ZP_04853702.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251844265|gb|EES72283.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 399

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 36/354 (10%)

Query: 1   MRQ---------FLVIIAMAMLSN-----IFPFLSIAETNKLPYYTLLDTNTGHVIAENY 46
           M++         F  ++A  +L              A +       ++D  +G ++   +
Sbjct: 1   MKKDSHDRRLHSFCCLLAAVLLFAWLNPQAVQAAPDAPSIHAQAAAVIDVTSGRLLYSLH 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            D     ASLTK+MTA V     K     L+  +T+ KNA     S+     G  M+L+N
Sbjct: 61  GDDELPIASLTKIMTAIVAIEHGK-----LSDMVTVGKNAYGKEGSSLYLHLGEEMSLEN 115

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L  L+++S ND A AIAE +  +E+ FV  MN  +K LGL+ THF N HG+   GHY++
Sbjct: 116 MLYGLMLRSGNDAATAIAEHVGGSEEGFVYLMNEKAKLLGLTHTHFQNPHGLDAKGHYSS 175

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFT 221
           A D+A L+     +                       K+ N N  +  + GADG+KTG+T
Sbjct: 176 ANDLAKLTSYALKNPHFKEIVRTPSKTAPNPNDPWDYKWLNKNKMLRFYDGADGVKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---- 277
             +   +V+SA +  Q +  V L   D          LL   F N      I+       
Sbjct: 236 KTARRCLVSSATRNGQQIAVVTLNDGDD---WNDHRKLLDYSFANFPLTTLISKGQAIEN 292

Query: 278 -----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                 DF       EV  +   +   +    ++  + + +       I    +
Sbjct: 293 GLVTGADFKYALAPEEVGKVERRLKLVEARTGSFGYRGRISVRLNGEEIGTVPV 346


>gi|53716694|ref|YP_105744.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 23344]
 gi|67641067|ref|ZP_00439854.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|124381420|ref|YP_001024168.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126447167|ref|YP_001078428.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei NCTC 10247]
 gi|254200552|ref|ZP_04906917.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei FMH]
 gi|254204580|ref|ZP_04910933.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei JHU]
 gi|52422664|gb|AAU46234.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 23344]
 gi|124289440|gb|ABM98709.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
           10229]
 gi|126240021|gb|ABO03133.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
           10247]
 gi|147748164|gb|EDK55239.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei FMH]
 gi|147754166|gb|EDK61230.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei JHU]
 gi|238521922|gb|EEP85370.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
          Length = 333

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERAALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPNHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|313635871|gb|EFS01844.1| D-alanyl-D-alanine carboxypeptidase DacA [Listeria seeligeri FSL
           S4-171]
          Length = 445

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/367 (20%), Positives = 141/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A T        ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPNIAQAAEAPTVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAINDGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+F   MN  ++ L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFXAMMNKKAEELKLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P+ +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLIDDYPEVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGGEGEHTSARFDETNKMLDYSFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V     ++    K         K     ++     +
Sbjct: 317 KAGAKVKDPSTIEVDKGKEDTVGLVTKDEVKLVVP-KNGNEPKLTTKVTLKDKTLEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KNTEVGE 382


>gi|323136415|ref|ZP_08071497.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocystis sp. ATCC
           49242]
 gi|322398489|gb|EFY01009.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylocystis sp. ATCC
           49242]
          Length = 592

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 85/232 (36%), Positives = 134/232 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  +         +PAS+TK+MT Y++F  L++ K  L +P+ IS +A+  
Sbjct: 90  AAIVVDGNSGKTLYARNEHELRHPASVTKVMTLYLLFEQLEKGKLRLDSPLMISSHAAAQ 149

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            PS    + G T++++NA+K ++ KSANDIA AIAE++   E  F Q M   +  LG+  
Sbjct: 150 APSKLGLRPGETISVENAIKAVVTKSANDIACAIAENIGGDEHTFAQMMTRKAHALGMRN 209

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           TH+ NA G+   G  TTA D+A+L   I+  FP+Y  YF        G  + N N  +G 
Sbjct: 210 THYENASGLPDPGQITTAYDLAVLGRAIQDRFPRYYRYFSTHSFAYNGALHRNHNHLLGQ 269

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             G DG+KTG+T ASGFN++ S  +G+  ++AV++G      R+++ A L+ 
Sbjct: 270 VEGMDGIKTGYTRASGFNLLTSVRRGNHHIVAVVMGGATAGGRDRIMAGLIE 321


>gi|168215748|ref|ZP_02641373.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens NCTC
           8239]
 gi|182382096|gb|EDT79575.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens NCTC
           8239]
          Length = 444

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNAASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|205371955|ref|ZP_03224774.1| D-alanine carboxypeptidase [Bacillus coahuilensis m4-4]
          Length = 453

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 127/366 (34%), Gaps = 47/366 (12%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +      S           L++  TG ++ E   +     AS+TK+MT +++   + E +
Sbjct: 25  APSVAEASDPLNINADAAILVEAETGKILYEKNSETALGVASMTKMMTEFLLLEAISEGR 84

Query: 74  AMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 +++S             N   K  S  ++    + + + SAN   + IAE+L  
Sbjct: 85  VSFDQMVSVSDYGHRISQDTSLSNVPLKLDSQYSIKELYESMAIYSANGATITIAEALAG 144

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYTTARDMAILSW 175
           +E  FV+ MN  +  LGL    F+N+ G+                  +  +A D A L++
Sbjct: 145 SETNFVKMMNEKAAELGLENYKFVNSTGLNNADLLGQHPQGTGETEENVMSANDTATLAY 204

Query: 176 RIKTDFPQYMHYFQIKGLEIK------GKKYPNTNWA----VGTFLGADGMKTGFTCASG 225
            + T +P+ +    I  L  +           N NW     V  + G DG+KTG T  +G
Sbjct: 205 ELLTRYPEVLETASIPKLTFREGIADEQTNMDNWNWMLPSLVYGYEGMDGLKTGTTDFAG 264

Query: 226 FNIVASAIQGDQSLIAVILGAL------DRNTRNKVSASLLSMGFYNKTDRKKINYIIK- 278
            +   +A + D   I V++ A           R + +  +L   F N +  + +    K 
Sbjct: 265 ASFTGTAKRNDMRFITVVMNAKNASGTSTYQARFEETKKMLDYAFANYSVEEIVPAGFKL 324

Query: 279 ------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES------HFIDFEKI 326
                    +    +   +    +    K            +  ++           E  
Sbjct: 325 NDQETMPVVKGKEDSVGISSESALTAVVKNGEKEMYSPVFTEASDTLTEDGELTAPVEAG 384

Query: 327 TLLKNK 332
            ++   
Sbjct: 385 DVVGTL 390


>gi|18311103|ref|NP_563037.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens str.
           13]
 gi|18145786|dbj|BAB81827.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens str.
           13]
          Length = 444

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNAASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|307708560|ref|ZP_07645025.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus mitis NCTC
           12261]
 gi|307615476|gb|EFN94684.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus mitis NCTC
           12261]
          Length = 413

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++ +++++++ +     +        +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIILTLLSLSVIGSASTVAAQDFNIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    +++   ++     +  ++   D ++     E  T+
Sbjct: 301 KGDAYQDSKAPVQDGKEDTVTAIAKDDISLIERVGGQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|222149991|ref|YP_002550948.1| penicillin-binding protein [Agrobacterium vitis S4]
 gi|221736973|gb|ACM37936.1| penicillin-binding protein [Agrobacterium vitis S4]
          Length = 366

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 114/294 (38%), Positives = 171/294 (58%), Gaps = 1/294 (0%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                     ++D N+  V+        W PASLTKLMTAY  F  L+  +  L + +T+
Sbjct: 21  PSAVAANPVLVVDVNSLTVLEHQDSFKKWYPASLTKLMTAYTTFRALRAGEVRLDSVVTL 80

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S  A+   PS   FK GS MTLD+ALK+++VKSANDIAVA+AE++  ++  FV  MN  +
Sbjct: 81  SAFAASQAPSKMFFKPGSKMTLDDALKMMLVKSANDIAVAVAENVGGSQAAFVARMNAEA 140

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
             LG++++HF+N +G+   G Y+TARD+A+L+  I+ +FP+Y  YF+I+ ++   K YPN
Sbjct: 141 ARLGMTSSHFVNPNGLPAPGQYSTARDLAVLAVTIRREFPEYAGYFKIEAIDTGKKVYPN 200

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  VG F G DGMKTG+ CASGFN + SA +  ++LI V++GA     R  +SA+LL  
Sbjct: 201 VNMLVGRFDGVDGMKTGYICASGFNQITSATRNGRTLITVVMGADSLAARADISANLLQK 260

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
            F     +      +       L N V ++S E+C+T+       T+ +  + K
Sbjct: 261 YFDRPNAQGSRLSALGPDSVDGL-NAVNDVSAEMCSTEARKRRSETRDETGRMK 313


>gi|217418923|ref|ZP_03450430.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|226198000|ref|ZP_03793572.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|217398227|gb|EEC38242.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|225929876|gb|EEH25891.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
          Length = 333

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERAALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|167723745|ref|ZP_02406981.1| family S11 unassigned peptidase [Burkholderia pseudomallei DM98]
          Length = 318

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERAALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|126444942|ref|YP_001062743.1| peptidase [Burkholderia pseudomallei 668]
 gi|134283712|ref|ZP_01770410.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|167906685|ref|ZP_02493890.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|237510538|ref|ZP_04523253.1| family S11 unassigned peptidase [Burkholderia pseudomallei MSHR346]
 gi|126224433|gb|ABN87938.1| family S11 unassigned peptidase [Burkholderia pseudomallei 668]
 gi|134244894|gb|EBA44990.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|235002743|gb|EEP52167.1| family S11 unassigned peptidase [Burkholderia pseudomallei MSHR346]
          Length = 333

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERAALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-- 233
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A   
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRP 266

Query: 234 ----QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +    +IAV+LG      R   + +LL  GF 
Sbjct: 267 VGGARARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|333006637|gb|EGK26136.1| D-alanyl-D-alanine carboxypeptidase dacC domain protein [Shigella
           flexneri VA-6]
          Length = 269

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 86/251 (34%), Positives = 130/251 (51%), Gaps = 7/251 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
              LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND 
Sbjct: 77  GQVLKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDA 136

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   +  
Sbjct: 137 CIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIH 196

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P+     + K       + PN N     + L  DGMKTG T  +G+N+VASA QGD  
Sbjct: 197 DVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMR 256

Query: 239 LIAVILGALDR 249
           LI+V+LGA   
Sbjct: 257 LISVVLGAKTE 267


>gi|209549400|ref|YP_002281317.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209535156|gb|ACI55091.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 431

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 135/345 (39%), Gaps = 13/345 (3%)

Query: 1   MRQFLVIIAMAML-----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +R F  I    +L     +      +     K     +++  TG V+     D  ++PAS
Sbjct: 35  LRTFAGIALACLLPLTTGALAADSGAAGFATKAAQAYMIEAATGTVLLAKNEDQGFSPAS 94

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKL 110
           L KLMT  +VF  + + +    T   +S+ A     +            S + +++ +K 
Sbjct: 95  LAKLMTMDLVFDAVTKGQITFDTEYPVSEYAWRTGGAPSRTATMFASLKSRVRVEDLIKG 154

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++ AND  + +AE +  +E++F + M   ++ LG+    F N+ G+       TAR+M
Sbjct: 155 VAIQGANDSCIILAEGMAGSEQQFAESMTRRARELGMEKAEFGNSTGLPDGKSKVTAREM 214

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L+  ++  +P    YF     E       N N  +G  LGADG+ TGFT   G++IVA
Sbjct: 215 VTLATALQKSYPNLYPYFAQPDFEWNKIFQRNRNPLLGLDLGADGLATGFTEGEGYSIVA 274

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSN 287
           S  +  + L   + G      R + +  +L  G      R+       I         + 
Sbjct: 275 SVERDGRRLFLALAGVASDKERTEEAKRVLEWGLTAFESRQIFAENEVIGAASVYGGTAR 334

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            V  +++   +    I N +        +       +  T     
Sbjct: 335 TVDLVAKAPVSVYIPISNPDRLSARIIYRWPLAAPVQPDTQAGTL 379


>gi|146341457|ref|YP_001206505.1| putative D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium sp.
           ORS278]
 gi|146194263|emb|CAL78285.1| putative D-alanyl-D-alanine carboxypeptidase (Peptidase
           S11)(DD-carboxypeptidase) [Bradyrhizobium sp. ORS278]
          Length = 586

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 94/304 (30%), Positives = 153/304 (50%), Gaps = 4/304 (1%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D N+G  +    PD   +PASLTK+MT Y++F  L   K  L T + +S++A
Sbjct: 56  PAFASIVVDGNSGATLTATNPDALRHPASLTKIMTLYLLFERLDSGKMKLDTEMPVSEHA 115

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           SE  P+    + G T+ +++A+K L+ +SAND AV IAE++   E +F + M   +++LG
Sbjct: 116 SEQSPTKLGLRPGQTIRVEDAIKGLVTRSANDAAVVIAEAIGGDEDEFAKMMTRKARSLG 175

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           +S T ++NA G+      TTARD +IL   I+  FP+Y  YF       +G+   N N  
Sbjct: 176 MSRTTYVNASGLPADEQITTARDQSILGRAIQDRFPRYYRYFSTVVFNYRGQSIRNHNHL 235

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL----LSM 262
           +G   G DG+KTG+T ASGFNIV S  +G++ L+ V+LG     +R+ +  +L    L  
Sbjct: 236 LGNVEGIDGIKTGYTRASGFNIVTSLRRGNRHLVGVVLGGRSGGSRDAIMRNLLAENLEK 295

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           G   +T          D      + ++ + + E     +     +T  +           
Sbjct: 296 GATKRTVAAVGERGNSDAGDDQSTVQLASAAPETPAPSRAAKFISTLSEATAALPPAAPK 355

Query: 323 FEKI 326
             K+
Sbjct: 356 EAKV 359


>gi|225861235|ref|YP_002742744.1| penicillin-binding protein 3 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298255726|ref|ZP_06979312.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503122|ref|YP_003725062.1| serine family D-Ala-D-Ala carboxypeptidase [Streptococcus
           pneumoniae TCH8431/19A]
 gi|38142303|dbj|BAD00954.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142335|dbj|BAD00970.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142337|dbj|BAD00971.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142341|dbj|BAD00973.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142353|dbj|BAD00979.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|225727841|gb|ACO23692.1| penicillin-binding protein 3 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238717|gb|ADI69848.1| serine family D-Ala-D-Ala carboxypeptidase [Streptococcus
           pneumoniae TCH8431/19A]
          Length = 413

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAISAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|167742710|ref|ZP_02415484.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 14]
 gi|167849724|ref|ZP_02475232.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei B7210]
          Length = 310

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 9/271 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             V  A A  +      + A   +   + ++D ++G  +  +  D    PASLTKLMTAY
Sbjct: 32  LFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTKLMTAY 91

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIA 120
           V F  L+         +T++ +                G  + + + ++ LIV SAND A
Sbjct: 92  VAFDALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVASANDAA 151

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           + +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ R+  D
Sbjct: 152 LVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQRLNRD 211

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI------Q 234
           FP +  +   +          N N  +G     DGMKTG T A+G+ +V +A       +
Sbjct: 212 FPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRPVGGAR 271

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +IAV+LG      R   + +LL  GF 
Sbjct: 272 ARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|289436027|ref|YP_003465899.1| hypothetical protein lse_2666 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172271|emb|CBH28817.1| unnamed protein product [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 445

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 78/367 (21%), Positives = 142/367 (38%), Gaps = 42/367 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A T        ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 17  LAVSGFLVSPNIAQAAEAPTVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 76

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 77  LEAINDGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 136

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  ++ L L    F+NA G+              +  +  TAR
Sbjct: 137 AISEKIAGSEKEFVAMMNKKAEELKLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW----AVGTFLGADGMKTG 219
            MA L+  +  D+P+ +        E +          N NW     +    G DG+KTG
Sbjct: 197 GMAKLAKHLIDDYPEVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTG 256

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKI 273
            T  +G  + A+A+Q    +I V+L A         + R   +  +L   F N   ++  
Sbjct: 257 TTDYAGMCLTATAVQDGMRVITVVLHANGGGEGEHTSARFDETNKMLDYSFNNFKVKEVQ 316

Query: 274 NYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
               K         D  +++    V     ++    K         K     ++     +
Sbjct: 317 KAGAKVKDPSTIAVDKGKEDTVGLVTKDEVKLVVP-KNGNEPKLTTKVTLKDKTLEAPVK 375

Query: 325 KITLLKN 331
           K T +  
Sbjct: 376 KNTEVGE 382


>gi|332073203|gb|EGI83682.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA17570]
          Length = 413

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTTTSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|306843463|ref|ZP_07476064.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO1]
 gi|306276154|gb|EFM57854.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO1]
          Length = 370

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 1   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 57  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 117 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 176

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 177 FPQYAHYFATEAIDPGAGKKVQANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 236

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 237 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAETANLNQAV-DMRKAICS 295

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 296 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 336


>gi|325661133|ref|ZP_08149760.1| hypothetical protein HMPREF0490_00493 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472640|gb|EGC75851.1| hypothetical protein HMPREF0490_00493 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 404

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 77/363 (21%), Positives = 135/363 (37%), Gaps = 36/363 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE--TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L+ I   +L    P  +  E          L+D + G V+ E         AS TK
Sbjct: 3   MKKVLIGILTGVLLVSSPVSAKEEIEQLYAQSAVLMDADNGRVLFEKNGSEKKPMASTTK 62

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +           LT  + +S+NA+  P  +   +      L + L  L+++S ND
Sbjct: 63  IMTCILALEE-----GNLTDVVNVSENAARQPKVHLGMQMDEKFYLRDLLYSLMLESHND 117

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILS 174
            AVAIAE +  + + F   MN  +K +G   T+F+  +G+        H TTA D+A + 
Sbjct: 118 SAVAIAEHIGGSVQAFADKMNAKAKEIGCRDTYFITPNGLDASDDKGEHSTTAEDLARIM 177

Query: 175 WRIKTDFPQYMHYFQIKG---------LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
                  P+   +  I              +     N N  +    GA   KTGFT  +G
Sbjct: 178 SYCILKSPKKESFLSITQKGSYHFMDVDCHRSFSCQNHNAFLTMMDGALSGKTGFTGKAG 237

Query: 226 FNIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKKI--NYIIKDF 280
           +  V +     ++ +  +LG    N    +   +  L++ G  N   R+       ++D 
Sbjct: 238 YCYVGALESRGRTFVVALLGCGWPNNKGYKWADTRRLMTYGMENYELREAFSGKEPLRDV 297

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMK-----------EAKDKESHFIDFEKITLL 329
             +       N+ E+     K     N+ ++             + +E      E+   L
Sbjct: 298 TVKAGIPTSGNLFEKAHVPVKIEKIQNSPVEVLLHREEEIETVVELQEEVQAPIERYEKL 357

Query: 330 KNK 332
              
Sbjct: 358 GTV 360


>gi|38142331|dbj|BAD00968.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 413

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAISAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|329930179|ref|ZP_08283792.1| D-alanyl-D-alanine carboxypeptidase DacA [Paenibacillus sp. HGF5]
 gi|328935201|gb|EGG31682.1| D-alanyl-D-alanine carboxypeptidase DacA [Paenibacillus sp. HGF5]
          Length = 472

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 34/340 (10%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            ++    L++ +TG V+     D    PAS+TK+MT Y+V   +K+ +      +T+ +N
Sbjct: 79  LEVSSAVLIEPSTGQVLLSINADEALPPASMTKMMTEYIVAEKVKQGELAWDDVVTVGEN 138

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A +   S     +G   T++     + V SAND  VA+AE +  +E +FV  MN+T+K +
Sbjct: 139 AEKTVGSRIFLAEGDQHTVEELYIAMAVGSANDATVALAEHIAGSEAEFVTMMNDTAKKM 198

Query: 146 GLSATHFMNAHGVV------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           GL    F+N+ G+                   +A D A+L+  I  D P +  +  I+  
Sbjct: 199 GLKTAFFINSTGLSRADMPEKYRPAEDKETVMSAMDTALLAKYIVEDHPDFARFTAIQSH 258

Query: 194 EIKGK---KYPNTNWA-----------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + + +      N NW               + G DG+KTG T A+G+    +A +    L
Sbjct: 259 KFRPRDTSPIINYNWMLEANKSITNFKAYAYEGLDGLKTGHTNAAGYCFAGTAERDGMRL 318

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I+V++G      R K +  +L  GF N   ++           + +  +     E    T
Sbjct: 319 ISVVMGTKSEGARFKETKKVLDYGFDNFEVKEVQAAGATVQGFETVEVKKGKGKEAGLVT 378

Query: 300 QKEIINYNTQMKEAKDK--------ESHFIDFEKITLLKN 331
            K +     +    K+          S      K T +  
Sbjct: 379 DKALTFVVPKGSSGKNITFEAKLDSSSVTAPVAKDTKVGT 418


>gi|261403951|ref|YP_003240192.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp.
           Y412MC10]
 gi|261280414|gb|ACX62385.1| Serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp.
           Y412MC10]
          Length = 472

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 34/340 (10%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            ++    L++ +TG V+     D    PAS+TK+MT Y+V   +K+ +      +T+ +N
Sbjct: 79  LEVSSAVLIEPSTGQVLLSINADEALPPASMTKMMTEYIVAEKVKQGELAWDDVVTVGEN 138

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A +   S     +G   T++     + V SAND  VA+AE +  +E +FV  MN+T+K +
Sbjct: 139 AEKTVGSRIFLAEGDQHTVEELYIAMAVGSANDATVALAEHVAGSEAEFVTMMNDTAKKM 198

Query: 146 GLSATHFMNAHGVV------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           GL    F+N+ G+                   +A D A+L+  I  D P +  +  I+  
Sbjct: 199 GLKTAFFINSTGLSRADMPEKYRPAEDKETVMSAMDTALLAKYIVEDHPDFAKFTAIQSH 258

Query: 194 EIKGK---KYPNTNWA-----------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + + +      N NW               + G DG+KTG T A+G+    +A +    L
Sbjct: 259 KFRPRDTSPIINYNWMLEANKSITNFKAYAYEGLDGLKTGHTNAAGYCFAGTAERDGMRL 318

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I+V++G      R K +  +L  GF N   ++           + +  +     E    T
Sbjct: 319 ISVVMGTKSEGARFKETKKVLDYGFDNFEVKEVQAAGATVQGFETVEVKKGKGKEAGLVT 378

Query: 300 QKEIINYNTQMKEAKDK--------ESHFIDFEKITLLKN 331
            K +     +    K+          S      K T +  
Sbjct: 379 DKALTFVVPKGSSGKNITFEAKLDSSSVTAPVAKDTKVGT 418


>gi|76818571|ref|YP_335397.1| peptidase [Burkholderia pseudomallei 1710b]
 gi|126456879|ref|YP_001075694.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242313141|ref|ZP_04812158.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254265595|ref|ZP_04956460.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
 gi|76583044|gb|ABA52518.1| family S11 unassigned peptidase [Burkholderia pseudomallei 1710b]
 gi|126230647|gb|ABN94060.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242136380|gb|EES22783.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254216597|gb|EET05982.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 333

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 9/271 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             V  A A  +      + A   +   + ++D ++G  +  +  D    PASLTKLMTAY
Sbjct: 32  LFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTKLMTAY 91

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIA 120
           V F  L+         +T++ +                G  + + + ++ LIV SAND A
Sbjct: 92  VAFDALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVASANDAA 151

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           + +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ R+  D
Sbjct: 152 LVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQRLNRD 211

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI------Q 234
           FP +  +   +          N N  +G     DGMKTG T A+G+ +V +A       +
Sbjct: 212 FPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKRPVGGAR 271

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +IAV+LG      R   + +LL  GF 
Sbjct: 272 ARHRVIAVLLGEPTEKQRLADARALLDQGFA 302


>gi|222148621|ref|YP_002549578.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Agrobacterium vitis S4]
 gi|221735607|gb|ACM36570.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Agrobacterium vitis S4]
          Length = 484

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 4/261 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR   V + +A++       +        Y   ++D N G V+     D    PASLTK+
Sbjct: 17  MR---VSLTVALVCATLVAPAPEAAAASRYADIVVDVNNGKVLRATDADSLRYPASLTKM 73

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+VF  L++ +  L + + +S +A+  PPS    + G + T++  ++ L+ +SAND 
Sbjct: 74  MTLYLVFEALEKGRIRLNSSVPVSAHAASEPPSKLGLRPGGSFTVEQGIQALVTRSANDA 133

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A  E L  +E +F Q M + ++ LG+S T + NA+G+   G  TTARD A L   ++ 
Sbjct: 134 ATAFGEYLGGSEARFAQMMTSKARALGMSRTTYRNANGLPNSGQMTTARDQARLGMALRQ 193

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            FPQY  YF  +      +   N N  +G+  G DG+KTGFT ASGFN+V S     +S+
Sbjct: 194 HFPQYYAYFSTRSFTYGRQVIGNHNRLIGSVRGVDGIKTGFTNASGFNLVTSLQIDGKSV 253

Query: 240 IAVILGALDRNTRNKVSASLL 260
           + V+LG      R+     L+
Sbjct: 254 VGVVLGGASGAARDNQMRKLM 274


>gi|315613037|ref|ZP_07887948.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           ATCC 49296]
 gi|315315147|gb|EFU63188.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           ATCC 49296]
          Length = 413

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 141/366 (38%), Gaps = 32/366 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++  + + +        +        +   ++  TG ++ E   + P   AS+TKL
Sbjct: 1   MKKIILSFMTLFVFGTASTVSAQEFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L +    L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  VTVYLVYEALDQGTISLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATMVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +       G +  +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIRDYPQVLEITKKPTSTFAGLEIHSTNYMLEGMPAYRGGIDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   +++LL     N   +  + 
Sbjct: 241 GTTDKAGASFVGTTVEKGMRIITVVLNADQQDTNPYARFTATSALLDYISANFALKTVVQ 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             + +     ++   Q+        ++      S     E+  +
Sbjct: 301 KGEAYNDSKVTVLDGKEDSVIAVAKSDISIVQRIGSGTTPVLQFTPKSTSEMAPLEEGKV 360

Query: 329 LKNKIT 334
           +     
Sbjct: 361 VGTLTY 366


>gi|170740496|ref|YP_001769151.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium sp.
           4-46]
 gi|168194770|gb|ACA16717.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium sp.
           4-46]
          Length = 503

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 157/325 (48%), Gaps = 11/325 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENYPDHP 50
           R    +IA A +       + A                    ++D  +G V+     D  
Sbjct: 10  RSLPALIAAAAVLTAMTHPADARRRGHHHGGGGGYNPPFAAMVVDVKSGRVLHAVNEDAL 69

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
            +PAS+TK+MT Y++F  L+  K  L TP+ IS NA+   PS    + GST+T++ A+K 
Sbjct: 70  RHPASITKVMTLYLLFEQLERGKMSLDTPLEISANAARQAPSKLGLRPGSTITVEEAIKA 129

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L+ KSAND+A AI E++  +E  F + M   +  LG+S TH+ NA G+      TTARD+
Sbjct: 130 LVTKSANDVACAIGENIAGSEGAFAEMMTRKAHALGMSRTHYANASGLPDSDQITTARDL 189

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
            +L+  I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ 
Sbjct: 190 TVLARAIQDRFPRYYRYFQTRSFAFRGRVIGNHNHLLGRVEGVDGIKTGYTRDSGFNLMT 249

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           SA   D+ ++AV+LG     +R+ +   L+           +    + +  +++    V 
Sbjct: 250 SARLADRHIVAVVLGGKSVASRDAIMTRLVQGNLPKAYAGARTTPPVTELAERSRPAVVA 309

Query: 291 NISEEVCTTQKEIINYNTQMKEAKD 315
             S    T      + +  ++    
Sbjct: 310 ERSATTRTLVAAADDDDEGVETTNS 334


>gi|110800833|ref|YP_696799.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens ATCC
           13124]
 gi|168208823|ref|ZP_02634448.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens B str.
           ATCC 3626]
 gi|110675480|gb|ABG84467.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens ATCC
           13124]
 gi|170713162|gb|EDT25344.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens B str.
           ATCC 3626]
          Length = 444

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNVASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|229000174|ref|ZP_04159743.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|228759506|gb|EEM08483.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
          Length = 426

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 86/374 (22%), Positives = 141/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+ L I+ + +LS     ++I+        +     L D +TG ++ E  PD     AS
Sbjct: 3   MRKILSILLVFLLSFSSLGVTISHAEEKIHIEAAAAILFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              +K L    
Sbjct: 63  MSKLIVVYSVLEAIKEGKITWDTKVNISDYAYEISRNNEFSNVPFEKGRQYTVKELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 IIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  I T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNGENSLSARDMGILSKTIITKYPEILEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    SA +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 243 AYEGTDGLKTGSSDTAGYGFTISAKRGDLRLISVIIKTKSMDERFTESRELIDYGFNNFE 302

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            +           +E+    K+       +    DK          
Sbjct: 303 KQKLKIDKNNTISVVKGTEDTVTVKPEKEITVITKKGSKPPYTISTEADKSLSQDGKVVA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + + + +
Sbjct: 363 PIKKDAKVGSLVLE 376


>gi|148981388|ref|ZP_01816384.1| D-alanyl-D-alanine carboxypeptidase [Vibrionales bacterium SWAT-3]
 gi|145960880|gb|EDK26210.1| D-alanyl-D-alanine carboxypeptidase [Vibrionales bacterium SWAT-3]
          Length = 278

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 133/263 (50%), Gaps = 7/263 (2%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  + ++ F     +  A       + L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 16  VALSATIATSSFAAPIVVPDAPQIAAKGFVLMDYHSGKVLAEKEMNTQLSPASLTKMMTS 75

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L+     L   + IS+NA        S    + G+T+ ++   + +I++S ND 
Sbjct: 76  YVIGQELERGNINLNDDVVISENAWAKNFPDSSKMFVEVGTTVKVEELNRGIIIQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  + ++G+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 136 CVAMAEHIAGSEDAFVDLMNAWASSIGMKDTHFANVHGLDNPNLYSTPYDMALLGQALIR 195

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           D P     +  K     G    N N       +  DG+KTG T  +G+++V+SA +G   
Sbjct: 196 DVPDEYRIYSQKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSNAGYSLVSSATEGKMR 255

Query: 239 LIAVILGALDRNTRNKVSASLLS 261
           L+AV++G  + N R   S  LLS
Sbjct: 256 LVAVVMGTKNANARKTESKKLLS 278


>gi|182624061|ref|ZP_02951849.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens D str.
           JGS1721]
 gi|177910954|gb|EDT73308.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens D str.
           JGS1721]
          Length = 444

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNAASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|229007696|ref|ZP_04165288.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228753564|gb|EEM03010.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
          Length = 426

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 140/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+ L I+ + +LS     ++ +        +     L D +TG ++ E  PD     AS
Sbjct: 3   MRKILSILLVFLLSFSSLGVTTSHAEEKIHIEAAAAILFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              +K L    
Sbjct: 63  MSKLIVVYSVLEAIKEGKITWDTKVNISDYAYEISRNNEFSNVPFEKGRQYTVKELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 IIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  I T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNGENSLSARDMGILSKTIITKYPEILEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    SA +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 243 AYEGTDGLKTGSSDTAGYGFTISAKRGDLRLISVIIKTKSMDERFTESRELIDYGFNNFE 302

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            +           +E+    K+       +    DK          
Sbjct: 303 KQKLKIDKNNTISVVKGTEDTVTVKPEKEITVITKKGSKPPYTISTEADKSLSQDGKVVA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + + + +
Sbjct: 363 PIKKDAKVGSLVLE 376


>gi|38142281|dbj|BAD00943.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142299|dbj|BAD00952.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142351|dbj|BAD00978.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 413

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGCASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIEQIGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|182419858|ref|ZP_02951098.1| D-alanyl-D-alanine carboxypeptidase [Clostridium butyricum 5521]
 gi|237666495|ref|ZP_04526480.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182376406|gb|EDT73988.1| D-alanyl-D-alanine carboxypeptidase [Clostridium butyricum 5521]
 gi|237657694|gb|EEP55249.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 413

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 128/339 (37%), Gaps = 22/339 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M+++   ++M +L    P    A             L+D ++G ++     D  + PAS 
Sbjct: 1   MKRYFKFLSMLLLFLCIPLTVHAETAKPEINAQGCALIDASSGTILYGKNEDCTFEPAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA V     K     LT  +TI +N +    +     KG  +T+ + L  L+++S 
Sbjct: 61  TKVMTALVALDKCK-----LTDEVTIQENFTSVDGTAIGLLKGDVVTVHDLLLGLLMESG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A  +A  +  +   F Q MN  +K LG +AT F N  G+    H TT  D+A+    
Sbjct: 116 NDCANELAYHVSGSIDSFAQLMNEKAKELGATATSFRNPSGLPDPEHLTTPHDLALFLRE 175

Query: 177 IKTDF------PQYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASG 225
              +               +     +     N N+         +  A   K G+T  + 
Sbjct: 176 AIKNQDFLDIAQTPYATITMINNPERTIIINNKNYMINKNSKYYYKYALCGKNGYTTKAN 235

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
              V+SA +    LIA  L A+D+N       S+ + GF N +  K  +   +       
Sbjct: 236 HTYVSSAEKDGHILIASFLNAMDKNQNFFDMQSVFNYGFDNYSFVKLYDKGQEVAQYDVT 295

Query: 286 SN--EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            N      I++ +     +    +       + E     
Sbjct: 296 KNLTVPLLINKTLEYPVLKGDESSLSFDIKVNDEDLSKK 334


>gi|163868095|ref|YP_001609299.1| penicillin-binding protein [Bartonella tribocorum CIP 105476]
 gi|161017746|emb|CAK01304.1| penicillin-binding protein [Bartonella tribocorum CIP 105476]
          Length = 449

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 91/292 (31%), Positives = 145/292 (49%), Gaps = 1/292 (0%)

Query: 2   RQFLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++  +   M + S  + F              ++D  TG  + +        PASLTK+M
Sbjct: 13  KKIAISFIMLVSSYCWAFATPQGAYPDKYAAIVIDATTGKTLFQANATLKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  ++ ++    TPI +S  A+  PP+   FK G T++ + A K LI +SAND+A
Sbjct: 73  TLYLLFEAMQMRRVTPNTPIPVSHYAAMRPPTKIGFKAGQTISAEAAAKALITRSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AIAE L  +EK F + M   ++ LG+  THF NA G+    +Y+TARD+A LS  ++  
Sbjct: 133 TAIAEYLGGSEKNFARMMTAKARKLGMKHTHFANASGLPDVQNYSTARDIATLSLALRQH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F+ K    +G    + N  V    G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPKQYKLFKTKSFNFRGHTINSHNKLVKVMKGVDGIKTGYTQMSGSNLATSMRLEGRSVV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           AV++G      R++  ASLL+         K    ++   + Q  +     I
Sbjct: 253 AVVMGGKSSTARDEHMASLLNQYLPKANQMKSGERLMASVHYQLPTGAKTPI 304


>gi|49475404|ref|YP_033445.1| penicillin-binding protein [Bartonella henselae str. Houston-1]
 gi|49238210|emb|CAF27420.1| Penicillin-binding protein [Bartonella henselae str. Houston-1]
          Length = 449

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 97/261 (37%), Positives = 140/261 (53%), Gaps = 1/261 (0%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++  +   +  LS  + F +  E         ++D NTG  + +        PASLTK+M
Sbjct: 13  KKIAIAFVVLALSYSWAFATPQEAYPDKYAAIVIDANTGKTLFQANATLKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  +  ++    TPI +S+NA+  PP+    K G T++   A K LI +SAND+A
Sbjct: 73  TLYLLFEAMHMRRVTPNTPILVSRNAATRPPTKLGLKTGQTISAQEAAKALITRSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AIAE L   EKKF + M   ++ LG+  THF NA G+    +Y+TARDMA LS  ++  
Sbjct: 133 TAIAEYLGGNEKKFARMMTAKARKLGMINTHFANASGLPDVRNYSTARDMATLSLALRKH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQ    F+IK     G      N  V T  G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPQQYKLFKIKSFIFHGHTVNTHNKLVKTMKGVDGIKTGYTQMSGSNLATSMRIEGRSIV 252

Query: 241 AVILGALDRNTRNKVSASLLS 261
           AV++G      R+K  ASLLS
Sbjct: 253 AVVMGGKSSTARDKHMASLLS 273


>gi|38142295|dbj|BAD00950.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 413

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDYKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|86356590|ref|YP_468482.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
 gi|86280692|gb|ABC89755.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
          Length = 419

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 90/290 (31%), Positives = 142/290 (48%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           ++      +           +LD  TG V+A    D   +PASLTK+MT Y+ F  LK  
Sbjct: 1   MTVTLAVSAPLAALAGSASLILDARTGKVLASENADTLNHPASLTKMMTLYLTFEALKRG 60

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A A+AE+L  +E 
Sbjct: 61  KIAWDTPIKMSKYAAARPPTKLGVKAGGTITVREAVYGMIVKSANDAAAAMAETLGGSES 120

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F + M   ++ LG+S T F+NA G+      TTARDM+ L   +  +FP     F +  
Sbjct: 121 GFARMMTAKARQLGMSRTVFVNASGLPNSSQVTTARDMSTLGVALMKNFPNEYRLFSMAS 180

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
              +GK     N  +  + G DG+KTG+T ASGFN+V++   G++ ++ V+LG     +R
Sbjct: 181 FNFRGKTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVVGVVLGGRTARSR 240

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           +    +LL       +       +     ++ +     + + +V      
Sbjct: 241 DARMEALLDRYLGRASSSGGAKLMASVGAREPVEVASASGASDVPVPLNA 290


>gi|148997049|ref|ZP_01824703.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP11-BS70]
 gi|168575530|ref|ZP_02721466.1| penicillin-binding protein 3 [Streptococcus pneumoniae MLV-016]
 gi|169833078|ref|YP_001694325.1| penicillin-binding protein 3 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307067470|ref|YP_003876436.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           AP200]
 gi|38142285|dbj|BAD00945.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142289|dbj|BAD00947.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142315|dbj|BAD00960.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142317|dbj|BAD00961.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|66817136|gb|AAY56864.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|147756749|gb|EDK63789.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP11-BS70]
 gi|168995580|gb|ACA36192.1| penicillin-binding protein 3 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|183578404|gb|EDT98932.1| penicillin-binding protein 3 [Streptococcus pneumoniae MLV-016]
 gi|221327906|gb|ACM17689.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327912|gb|ACM17692.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327918|gb|ACM17695.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|221327920|gb|ACM17696.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|306409007|gb|ADM84434.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           AP200]
 gi|327390225|gb|EGE88568.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA04375]
          Length = 413

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIEQIGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|239629143|ref|ZP_04672174.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519289|gb|EEQ59155.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 530

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 71/330 (21%), Positives = 135/330 (40%), Gaps = 28/330 (8%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
             + +   P      + +     ++D +TG V+     D  + PAS+TK++TA +V    
Sbjct: 24  FTIRALAAPEWPSDVSIQADGGIVMDADTGTVLYGKNMDQQYYPASITKILTALIVLERC 83

Query: 70  KEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                 L   ++ S +         S++   +G  +T+ + L  L++ SAN+ A A+A  
Sbjct: 84  D-----LDEMVSFSHDDVYNVEAGSSSAGIDEGDVLTVRDCLYALMLASANESANALACH 138

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP---- 182
           +  + ++F + MN  + +LG + +HF N  G+    HYTTA DMA+++     +      
Sbjct: 139 VSGSREEFAKLMNEKAASLGCTGSHFANPSGLNDENHYTTAHDMALIAREAIKNPEFLAI 198

Query: 183 ---QYMHYFQIKG-----LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
              +       K            K  N N +V  + GA   KTG+T  +G  +V  A +
Sbjct: 199 NGTRSYKLAPTKRTPEGGYVANHHKMLNKNESVY-YPGAFAGKTGYTSLAGNTLVTCAKK 257

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
              +LIAV+L      +    + ++    F N    K ++Y  +    +N    +  ++ 
Sbjct: 258 DGMTLIAVVLN--GHQSHYSDTKAMFDFAFRNFQSLKAVDYETQYRSVEN-DMTIAGMTA 314

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
                    +  +   +    K   F D +
Sbjct: 315 RDSI----SLELDKNGRVVIPKSGDFADVK 340


>gi|15964646|ref|NP_384999.1| hypothetical protein SMc00068 [Sinorhizobium meliloti 1021]
 gi|307304223|ref|ZP_07583975.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
 gi|307320528|ref|ZP_07599943.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|15073824|emb|CAC45465.1| Probable D-alanyl-D-alanine carboxypeptidase [Sinorhizobium
           meliloti 1021]
 gi|306893804|gb|EFN24575.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           AK83]
 gi|306902691|gb|EFN33284.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sinorhizobium meliloti
           BL225C]
          Length = 409

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 143/261 (54%), Gaps = 4/261 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M  F + +A   +       ++A         ++D  TG V++   PD   +PASLTK+M
Sbjct: 1   MTSFRLAMATIAVLFFGAVQAMA----GNASLVVDARTGRVLSAENPDTLHHPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L   +    TP+ +S  A+  PP+    K G T+T++ A+  +IV+SAND A
Sbjct: 57  TLYMTFEALHRGQIAWKTPVPVSATAARKPPTKLGVKAGGTITVEEAVYGMIVRSANDAA 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE L  +E+ F + MN  ++ LG++ T F+NA G+      TTARDMA L+  +   
Sbjct: 117 AAMAERLGGSEEGFARMMNAKARQLGMNRTFFVNASGLPASEQVTTARDMARLAVALMRH 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +P+    F ++    +G+     N  +  + G DG+KTG+T ASG+N+V++    ++ LI
Sbjct: 177 YPREYRLFSVQSFAFRGRVIRGHNNLMYRYQGMDGIKTGYTRASGYNLVSAVNDRNRRLI 236

Query: 241 AVILGALDRNTRNKVSASLLS 261
            V+LG     +R++  A+LL 
Sbjct: 237 GVVLGGRSARSRDEKMAALLD 257


>gi|168212842|ref|ZP_02638467.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens CPE
           str. F4969]
 gi|170715638|gb|EDT27820.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens CPE
           str. F4969]
          Length = 444

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNAASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|307704894|ref|ZP_07641785.1| penicillin-binding protein 3 [Streptococcus mitis SK597]
 gi|307621508|gb|EFO00554.1| penicillin-binding protein 3 [Streptococcus mitis SK597]
          Length = 413

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 150/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++ +++++++ +     +        +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIILTLLSLSVIGSASTVAAQDFNIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  LTVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNVPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIKDATVVNTTGLNNETLGDNIYPGSNKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I VIL A     +  +R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVILNADHQDNNPYSRFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKVPVQDGKEDTVTAVAPEDIYLIERGGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|116874117|ref|YP_850898.1| D-alanyl-D-alanine carboxypeptidase [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116742995|emb|CAK22119.1| D-alanyl-D-alanine carboxypeptidase [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 445

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 76/383 (19%), Positives = 146/383 (38%), Gaps = 53/383 (13%)

Query: 1   MRQFL-----------VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +           + ++  ++S      +   T        ++ +TG ++     D 
Sbjct: 1   MKKIIKKTGIAIMAVSLAVSGFLVSPKAAQAAAEPTVNANAAIAIEESTGKILYSKDADK 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLD 105
               AS+TK+M  Y++   + + K      +TIS+ A +     S            T+ 
Sbjct: 61  LMGIASMTKMMDEYLLLEAINDGKIKWDDKVTISEYAYKVSQDRSLSNVPLRLGEEYTVQ 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
              + + + SAN  A+AIAE +  +EK FV  MN  ++ L L    F+N+ G+       
Sbjct: 121 ELYEAMAIYSANGAAIAIAEKVAGSEKAFVDLMNKKAEKLKLGEHQFVNSTGLNNEDLKG 180

Query: 159 ------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA- 206
                  +  +  TAR MA L+  +  D+P+ +        E +          N NW  
Sbjct: 181 GQQVGGPKDENKMTARGMAKLAKHLIKDYPEVLKTASTTKKEFRKGTSDQIDMTNWNWLL 240

Query: 207 ---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKVSA 257
              +    G DG+KTG T  +G  + A+A++    +I V+L A         + R   + 
Sbjct: 241 PGLIYGRKGVDGLKTGTTDYAGMCLTATAVEDGMRVITVVLHANGGGAGEHTSARFDETN 300

Query: 258 SLLSMGFYNKTDRKKINYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            +L   F N   ++      K         D  +++    V   + ++   + +     +
Sbjct: 301 KMLDYSFNNFKVKEVQKAGSKVKDPSSIAVDKGKEDTVGLVTKDAVKLVVPKNDNAPKLS 360

Query: 309 QMKEAKDKESHFIDFEKITLLKN 331
                KDK +  +  +K T +  
Sbjct: 361 TKVTLKDK-TLEVPVKKNTAVGE 382


>gi|331266509|ref|YP_004326139.1| D-alanyl-D-alanine carboxypeptidase,penicillin-binding protein 3
           [Streptococcus oralis Uo5]
 gi|326683181|emb|CBZ00799.1| D-alanyl-D-alanine carboxypeptidase,penicillin-binding protein 3
           [Streptococcus oralis Uo5]
          Length = 413

 Score =  165 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 141/367 (38%), Gaps = 32/367 (8%)

Query: 1   MRQFLVIIAMAMLS-NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++     ++        +        +   ++  TG ++ E   + P   AS+TKL
Sbjct: 1   MKKIILSFMTLLVFGTASTVSAQEFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L++    L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  VTVYLVYEALEQGTISLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATMVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +       G +  +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIRDYPQVLEITKKPTSTFAGLEIHSTNYMLEGMPAYRGGIDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   +++LL     N   +  + 
Sbjct: 241 GTTDKAGASFVGTTVEKGMRIITVVLNADQQDTNPYARFTATSALLDYISANFALKTVVQ 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             N       ++   Q+        ++      S     E+  +
Sbjct: 301 KGEAYNDSKVTVLDGKEDNVTAVAKSDISIVQRIGSATTPALQFTPKLTSEMAPLEEGKV 360

Query: 329 LKNKITK 335
           +     +
Sbjct: 361 VGTLTYE 367


>gi|295696423|ref|YP_003589661.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           tusciae DSM 2912]
 gi|295412025|gb|ADG06517.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           tusciae DSM 2912]
          Length = 366

 Score =  165 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 74/342 (21%), Positives = 137/342 (40%), Gaps = 19/342 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
            V + M +   +    + +            ++D  +G V+ E   D     ASLTK++T
Sbjct: 9   FVAVTMILFPGVGAAAANSPDLYGISAQGAAVVDVGSGRVLYEKNGDQMMPIASLTKIVT 68

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            ++     +     L   +TIS NA+    S+   + G T TL + +  ++++S ND A 
Sbjct: 69  GWLAVESGR-----LDERVTISANAARKEGSSVYLRAGETYTLRDLVYAMMLRSGNDAAT 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A+AE L  +E +F   MN  ++ +GL   HF N HG+   GH  +A D+A ++ +   + 
Sbjct: 124 AVAEHLAGSEARFAALMNAKAREMGLRHVHFANPHGLDAPGHGASAVDLARMTAKALQNP 183

Query: 182 ------PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                     H     G         N N  +  + GADG+KTG+T  +G  + +SA + 
Sbjct: 184 EFAAVVRTKYHRMPWPGEAWDR-VMRNKNKMLWRYPGADGVKTGYTKRAGRCLASSATRD 242

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN-ISE 294
              ++ V+L   D       +A L    F                 +  +   VP  +  
Sbjct: 243 GHQVVVVVLKDPDD---WADTARLFDHVFQTYEWVPVQAGPASVPVRGGVVPTVPVRVQG 299

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 +    ++   +      +     E + LL+ ++ ++
Sbjct: 300 PDRFPIRADEKFHMDWELKPRLRAPVSRGEPVGLLRIQVGEE 341


>gi|168205928|ref|ZP_02631933.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens E str.
           JGS1987]
 gi|170662569|gb|EDT15252.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens E str.
           JGS1987]
          Length = 444

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEEDHMTTPYDLALIMNAASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSKHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|154502526|ref|ZP_02039586.1| hypothetical protein RUMGNA_00339 [Ruminococcus gnavus ATCC 29149]
 gi|153796922|gb|EDN79342.1| hypothetical protein RUMGNA_00339 [Ruminococcus gnavus ATCC 29149]
          Length = 423

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 72/328 (21%), Positives = 131/328 (39%), Gaps = 29/328 (8%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +           L+D ++G ++     +     AS TK+MT  +        +A     +
Sbjct: 49  NTPGQLYARSAVLMDADSGRILFAKNAETERPMASTTKIMTCILALE-----RADPDESV 103

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           ++S NA+  P       +G    L + L  L+++S ND AV +AE L  + ++F   MN 
Sbjct: 104 SVSANAAAQPRVRLGTVEGQKFKLKDLLYSLMLESHNDTAVMLAEHLAGSVEQFADEMNQ 163

Query: 141 TSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKG---- 192
            ++ LGLS THF+  +G+        H TTA ++A +      + P+   + +I G    
Sbjct: 164 KARELGLSHTHFVTPNGLDGADDGGSHRTTAEELARIMRYCVMESPKRKEFLEITGVSSY 223

Query: 193 -----LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                 + +     N N  +    GA   KTGFT  +G+  V +  +  ++ I  +L   
Sbjct: 224 QFSDLEQTQTYSCINHNAFLTMMEGAVSGKTGFTGEAGYCYVGALKREKRTFIVALLACG 283

Query: 248 DRNTR---NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
             N R    + +  L+  G  +   +            Q     V +   +  + QKE  
Sbjct: 284 WPNNRSYKWEDTKKLMEYGLEHFEYQSMKGAG------QKFKIRVTDGIPD--SNQKEAY 335

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNK 332
            Y   + E  +      D+E + + +N 
Sbjct: 336 TYAEALSEQSNLSFLLADWESVQVRRNI 363


>gi|254719069|ref|ZP_05180880.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|265984060|ref|ZP_06096795.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|306838351|ref|ZP_07471196.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. NF 2653]
 gi|264662652|gb|EEZ32913.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|306406491|gb|EFM62725.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. NF 2653]
          Length = 396

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 8/315 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            K P   L+D  +G V+     D P  PASL KLMTA VVF  L++ +  L T   +S+ 
Sbjct: 37  TKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAEVVFEALEKGRTTLETAYPVSEY 96

Query: 86  ASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           A          S    +  ST T+ + L+ +IV+SAND A+ +AE L  +E+ F   MN 
Sbjct: 97  AWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSANDGAIVLAEGLAGSEQTFAGAMNQ 156

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K LGLS++ F+N+ G+   G   T  D+  L+  I    P+Y  Y+            
Sbjct: 157 RAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIHAAHPEYYRYYAQPAYTWNNITQ 216

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +   +GADGM TGFT ASG+ +V SA Q  + L   + G      R + +  L+
Sbjct: 217 RNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRRLFLAMSGLASVKEREEEARKLI 276

Query: 261 SMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
             G     D        K          S+ +P + ++                    + 
Sbjct: 277 QWGMTGFDDMCIFAANDKVGDAQVFGGQSSTLPLMVKKDVELLLPKEAREKLKARIIYEG 336

Query: 318 SHFIDFEKITLLKNK 332
                    T +   
Sbjct: 337 PLQAPIAAGTEVGRL 351


>gi|89053769|ref|YP_509220.1| Serine-type D-Ala-D-Ala carboxypeptidase [Jannaschia sp. CCS1]
 gi|88863318|gb|ABD54195.1| Serine-type D-Ala-D-Ala carboxypeptidase [Jannaschia sp. CCS1]
          Length = 398

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 10/336 (2%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           ++ A     +     +     +     + D  +G V+     D    PAS++KLMT  + 
Sbjct: 13  LLAAGCFFVSSLMANAQGYETQARAAYVYDHASGQVLLALNADEALPPASMSKLMTLLMA 72

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  L++ +  L T + +S++A  +  S          T++  ++ +++ S ND +V + E
Sbjct: 73  FEALRDGRLTLETRVPVSEHAMSFGGSTMFLNTQDRPTIEELIRGVVIVSGNDASVVLGE 132

Query: 126 SLCKT--EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           +L     E+ F   M   ++ LG+  + F NA G    GH  + RD+ IL+ R+  +FP+
Sbjct: 133 ALSPDGTEEGFATMMTQRAQQLGMMNSTFRNASGWPADGHAMSMRDLGILAQRLIEEFPE 192

Query: 184 YMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           Y  YF     + + +      N N  +G  +GADG+KTG T  +GF +V SA+QGD+ + 
Sbjct: 193 YYGYFVETEFDYEDRSPANRFNRNPLLGLGIGADGLKTGHTQEAGFGLVGSAMQGDRRVT 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEV 296
            VI G    + R   +  L++  F     R  +   ++      +  +        SE +
Sbjct: 253 FVITGLDSADARAAEAERLVTWAFRQFVMRDVVEPGVELARAPVFLGSQETVGLAPSEGI 312

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 +++   +                  ++   
Sbjct: 313 EMLLPALLDPEIEANLT-YTSPLQAPVSAGDVVGEL 347


>gi|85374069|ref|YP_458131.1| D-alanyl-D-alanine carboxypeptidase [Erythrobacter litoralis
           HTCC2594]
 gi|84787152|gb|ABC63334.1| D-alanyl-D-alanine carboxypeptidase [Erythrobacter litoralis
           HTCC2594]
          Length = 347

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 11/309 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASE 88
            L+D  +G  +    PD  + PAS+TK+MTAY  F  +K+ K    T  T S+   +   
Sbjct: 1   MLVDMASGQTLYARNPDRRFVPASITKVMTAYTAFELMKQGKLAPGTRFTFSEAAADEWY 60

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S     +GS   + + L  +   SAND ++ +AE    +   ++  MN  +  LG+ 
Sbjct: 61  RTGSTMFLDRGSETAVTDLLMGITTVSANDGSIVLAEGAAGSVDNWLDLMNAHADALGMH 120

Query: 149 ATHFMNAHGVVQHGH-YTTARDMAILSWRIKTDFPQYM-HYFQIKGLEIKGKKYPNTNWA 206
            +HF   +G    G  +TTARD+  L+  + T+ P     YF  +GL   G    N +  
Sbjct: 121 QSHFGTPNGWPDEGRTFTTARDLVTLAKALITEHPGLYARYFGHRGLRTNGIAQDNYDPI 180

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            G   GADG+KTGFT  +G+  + SA +  + L+ V+  +    +R++ + +L+  GF  
Sbjct: 181 TGRIEGADGIKTGFTNQAGWGFLGSAERDGRRLVMVVAASPGMRSRDETARALMEWGFGA 240

Query: 267 KTDRKKINYIIK---DFYQQNLSNEVPNISE---EVCTTQKEIINYNTQMKEAKDKESHF 320
              R              Q      VP +++    V   +        ++       +  
Sbjct: 241 FDSRMLFRSGDTVGHARVQDGAEAAVPLMADRDIPVALPENANAEITLRIAYEGPLRAPV 300

Query: 321 IDFEKITLL 329
              EK+  L
Sbjct: 301 EQGEKVAQL 309


>gi|17986319|ref|NP_538953.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|225853470|ref|YP_002733703.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis ATCC
           23457]
 gi|17981904|gb|AAL51217.1| d-alanyl-d-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|225641835|gb|ACO01749.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis ATCC
           23457]
          Length = 370

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 1   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 57  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 117 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 176

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 177 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 236

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L+A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 237 LLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 295

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 296 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 336


>gi|331270026|ref|YP_004396518.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           BKT015925]
 gi|329126576|gb|AEB76521.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           BKT015925]
          Length = 412

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 90/329 (27%), Positives = 144/329 (43%), Gaps = 22/329 (6%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
              T       L+D NTG V+     D  + PAS TK+MTA +     K     L   +T
Sbjct: 27  TPPTVSADGVVLMDKNTGQVLYSKNLDTQYPPASTTKIMTALLTLENCK-----LDDVVT 81

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           + KNA     S     +G  +T+ + L  L+++SAND AVA++E +  + K+FV  MN  
Sbjct: 82  VGKNAVNVDGSKVYLFEGEKLTVKDLLYALLLQSANDSAVALSEHVAGSTKEFVNLMNKK 141

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP------QYMHYFQIKGLEI 195
           +K LG   T+F+N HG+    H TTARD+ ++   +             M+Y      E 
Sbjct: 142 AKELGCKNTNFVNPHGLYDDKHRTTARDLGLILRELSKHEEFKQIATTSMYYINPTNKET 201

Query: 196 KGKKYPNTNWAVG-----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K +   N +  +       + G +G KTG+T  S  + VA+A + ++SLIAV+L    ++
Sbjct: 202 KKRPIWNKDKLIQKNSKCYYEGCEGGKTGYTIQSKHSFVATATRNNKSLIAVLLH-DAKH 260

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIK--DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
           T       L   GF N T     N      ++   N        SE+    +++      
Sbjct: 261 TYWDDVIKLFDYGFNNYTRETLYNKDQTLCNYNVTNDLKIPILASEDFYYLKRKDAKDAP 320

Query: 309 QMKEAKDKESHFIDFEKITLL--KNKITK 335
           ++K   +       F K  ++   N I +
Sbjct: 321 KLKINDESLGSKS-FNKGDIILTGNIIYQ 348


>gi|125973686|ref|YP_001037596.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|256005769|ref|ZP_05430722.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum DSM 2360]
 gi|281417842|ref|ZP_06248862.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum JW20]
 gi|125713911|gb|ABN52403.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|255990269|gb|EEU00398.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum DSM 2360]
 gi|281409244|gb|EFB39502.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum JW20]
 gi|316940119|gb|ADU74153.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum DSM 1313]
          Length = 415

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 69/328 (21%), Positives = 126/328 (38%), Gaps = 6/328 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + ++ +    +    ++     K P   L++   G ++ +  P    + +   K+MT  +
Sbjct: 14  VAMMILFFSQSPVFAVAEPPEIKAPSAILMEVQRGQILYQKNPKLKLHVSCANKIMTGLI 73

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
               ++     L T IT+SK A     +    + G    +++ +  +++ SAND A  +A
Sbjct: 74  ALEKMQN---QLNTNITVSKKAVSVEGAVLNLEVGGKYPVEDLIYSVLLGSANDSANVLA 130

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +   EK FV+ MN  ++ L +  T+F N  G+     YTTA D+A+L     T    +
Sbjct: 131 EYIGGDEKGFVELMNKKAQELEMKDTYFTNPTGLYDEKQYTTAYDLAVLIRYALTKSSTF 190

Query: 185 MHYFQIKGLEI--KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              F  K        +   N+N    ++ G DG KTG+        + +A +  Q LI +
Sbjct: 191 NEMFSAKARPWVDGTQILINSNELFWSYDGVDGGKTGYNEIDRQTAITTATRNGQRLICI 250

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           +L +    +    S  LL  GF N      ++              +  +S         
Sbjct: 251 VLDSP-EESMYDDSVKLLDYGFLNFRTGILVSMGQPLKKVTVGDKVIDLVSIGDYYYTYP 309

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
                 +  E K  E       K  +L 
Sbjct: 310 AGENYIKNIEFKVPEKFDPPVLKSDVLG 337


>gi|288561558|ref|YP_003428964.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pseudofirmus
           OF4]
 gi|288548190|gb|ADC52072.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pseudofirmus
           OF4]
          Length = 446

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 138/364 (37%), Gaps = 31/364 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++  L+++   +L      +S           L+D  +G ++ +   +     AS++K+M
Sbjct: 10  IKAVLLLVITNVLITSPVSVSANPNINTNSAILVDATSGKILLQKNINELLKVASMSKMM 69

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS----TFKKGSTMTLDNALKLLIVKSA 116
           + Y+V   +          + IS    E   +N+      ++  T T+    + + + SA
Sbjct: 70  SEYLVLEAINNGAISWEQVVPISDLVREISHNNNLSNVYLRQDETYTVKELYESVAIYSA 129

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNL----GLSATHFMNAHGVVQH----------- 161
           N   +A+AE +  +E+ FV  MN+ +  L          F+N+ G+              
Sbjct: 130 NGATMALAELIAGSEESFVNMMNDKAMQLELGEYGIDYKFVNSTGLPNQYLLGKHPEGTT 189

Query: 162 ---GHYTTARDMAILSWRIKTDFPQYMHYFQI-----KGLEIKGKKYPNTNWA----VGT 209
               +  T R  A L++ +  D+P+ +    I     K       +  N NW     V  
Sbjct: 190 EKDENELTVRATAKLAFHLLKDYPEVLETASIERKIFKEGTEDFIQMDNWNWMLPGLVYG 249

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           +   DG+KTG+T  +G++   +A + +  LI V+        R   +  LL  GF   + 
Sbjct: 250 YPDVDGLKTGYTAQAGYSFTGTAERDNVRLITVVTKTSSLEERFSETKKLLDYGFSQFSI 309

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            + I    +   Q+ +        E    T + +I++    +          D E++   
Sbjct: 310 EELIPKGYRPEGQETVGVSKGKEHEVAVFTDESLISFVRVGERDNYIPVVTFDQERLNEN 369

Query: 330 KNKI 333
              I
Sbjct: 370 GELI 373


>gi|258510666|ref|YP_003184100.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257477392|gb|ACV57711.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 455

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 13/314 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            +       ++D +TG V+   +   P  PAS+TK+MTA +           LT  +T S
Sbjct: 67  PSIVSQAAVVMDMDTGAVVYAKHSTAPHYPASITKIMTALLALR-----LGHLTDVLTAS 121

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +A   PP     + G   TL + L  L++ SAND AV IAE    +   F   MN  ++
Sbjct: 122 TDAVRQPPDKLYMRAGEKATLKDLLYGLLIDSANDAAVEIAERYGGSVAHFADMMNAEAR 181

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK----GKK 199
            LG + THF+N  G+    H TTA DMA+++       P++      +  + K       
Sbjct: 182 ALGATHTHFVNPSGLPDPRHVTTAYDMAVIAR-AAMQIPEFRTIVDTRSFDWKGTAWQAT 240

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  + T+ GA G+KTGFT  +   +V +A +G  + +AV++         + + +L
Sbjct: 241 LTNLNRMLFTYPGAIGVKTGFTSVAHETLVVAATRGGTTFLAVLMDCPTDAEIRQDATNL 300

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI-SEEVCTTQKEIINYNTQMKEAKDKES 318
           L+  F +   ++ +    +  +      E P + SE V  T       +   +       
Sbjct: 301 LNYAFLHDETQRILPAGYRAGFVLARDGEDPVVTSEPVLATVPIGHPLDVIERVRVSAPL 360

Query: 319 HFIDFEKITLLKNK 332
                 K       
Sbjct: 361 DRAP--KGAAAGEL 372


>gi|306825360|ref|ZP_07458700.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432298|gb|EFM35274.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 411

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 142/366 (38%), Gaps = 34/366 (9%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++  I + +   +    +        +   ++  TG ++ E   + P   AS+TKL
Sbjct: 1   MKKIILSFITLFVFGTVSTVSAQEFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L++    L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  VTVYLVYEALEQGTISLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATMVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +       G +  +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIRDYPQVLEITKKPTSTFAGLEIHSTNYMLEGMPAYRGGVDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SLL     N   +  + 
Sbjct: 241 GTTDKAGASFVGTTVEKGMRIITVVLNADQQDSNPYARFTATSSLLDYVSANFALKTVVQ 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                     ++   Q+  +   T        +S     E+  +
Sbjct: 301 KGETYKDSKVTVLDGKEDKVAAIAKSDIAIVQR--VGSETTSALQFTPKSEIAPLEEGKV 358

Query: 329 LKNKIT 334
           +     
Sbjct: 359 VGTLTY 364


>gi|303241828|ref|ZP_07328323.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acetivibrio
           cellulolyticus CD2]
 gi|302590603|gb|EFL60356.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acetivibrio
           cellulolyticus CD2]
          Length = 429

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 85/361 (23%), Positives = 144/361 (39%), Gaps = 27/361 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++  +  I+   +  NI    +         Y L+D+ TG VI+E   D    PAS TK
Sbjct: 1   MKKLFIGIIMFTILNMNINTAKAEPLNIDAKAYILIDSKTGQVISEYNADQKLYPASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MTA +       ++ M  +   I  N       N     G  +   + L  L+V+SAN+
Sbjct: 61  IMTAIIGIENADPEQLMTVSQYAI--NNIGPGGMNIGLLPGEQLKFKDVLNALLVRSANE 118

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILS 174
            A  IAE++  T + F   MN  +K L  + T+F+N  G+        H TTARD+++++
Sbjct: 119 TAYVIAENVGPTPEAFFAKMNQRAKELACTNTNFVNPCGMDTDEASQNHLTTARDLSLMA 178

Query: 175 WRIKTDFPQYMHYFQI------KGLEIKGKKYPNTNWAVG------TFLGADGMKTGFTC 222
               T         +         +  +    P+TN           +    G+KTG+T 
Sbjct: 179 KHAMTLPLFKEIVKKTSCTIPPTNMHNEAYTLPSTNKLFYGKYSSKYYNEVTGIKTGYTV 238

Query: 223 ASGFNIVASAIQ-GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
            + FN+V+SA       LI+VILG  +     + S  LL  GF N + +  I        
Sbjct: 239 RASFNLVSSAKNEEGMELISVILGCPNSEGIYQSSKDLLEYGFKNYSMQNLIAANSFVTS 298

Query: 282 QQNLSNE------VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +           +    +  C    E  N     ++ K  ++     ++  +L +   K
Sbjct: 299 VRVADASYNPNLNIVAAEDLKCILPNEPTNQADISEDIKINKNITAPIKEGAVLGSIEYK 358

Query: 336 K 336
           +
Sbjct: 359 Q 359


>gi|329925045|ref|ZP_08279989.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
 gi|328940164|gb|EGG36496.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus sp. HGF5]
          Length = 323

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/293 (25%), Positives = 121/293 (41%), Gaps = 28/293 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +++L ++ M ++      + I                  L+D NTG ++     D P  P
Sbjct: 3   KRWLWLVMMLLIIVPIGAVVIGNIERAGFKPKVDARAVVLMDLNTGRILLSENGDLPLPP 62

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS++KLMT  V+   +K  K      + IS  AS+        K G  +T+    + + V
Sbjct: 63  ASMSKLMTELVILDDIKTGKRSWDDEVKISDTASDVRGVKIALKSGEILTVRELFQSITV 122

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT------------HFMNAHGVVQH 161
            SAND +VA+AE    +E+ FV+ MN  +K +GLS+                        
Sbjct: 123 YSANDASVALAEHFAGSEEAFVRKMNAKAKEIGLSSATRFVNASGVEQGTANGHAWSSDG 182

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWA------VGTFLGA 213
               TA D A L+  +    P  +        +I G+     NTNW         ++ G 
Sbjct: 183 ETVMTAEDTAKLAAHLIRSHPDILSTSSKTQTKISGRNLYLSNTNWMLPSLGGPYSYEGT 242

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           DG+K G+T  +G+    +A +    LIAV++G   +  R + +  L   GF  
Sbjct: 243 DGLKAGYTANAGYCFTGTAEKQGSRLIAVVMGTESKEARFEETRKLFDYGFSK 295


>gi|254520208|ref|ZP_05132264.1| D-alanyl-D-alanine carboxypeptidase [Clostridium sp. 7_2_43FAA]
 gi|226913957|gb|EEH99158.1| D-alanyl-D-alanine carboxypeptidase [Clostridium sp. 7_2_43FAA]
          Length = 418

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 83/348 (23%), Positives = 139/348 (39%), Gaps = 26/348 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR+  +  A           +    T       L+D  TG VI        + PAS TK+
Sbjct: 1   MRRIFLFTAFICSVFTINVKATELPTVYSEGAVLMDGRTGKVIYSKNEHTQYEPASTTKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA VV    K     LT  +TI++  +    S     KG   T++  +  L+++S ND 
Sbjct: 61  MTALVVLENTK-----LTDKVTINEKPTLVDGSAIGIAKGEVYTVEELMLGLLLESGNDC 115

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A+AE +  + ++F + MN  +K LG   T F N  G+ + GH TTA D+A++      
Sbjct: 116 AEALAEHVSGSNEEFAKLMNAKAKELGALDTTFKNPSGLHEDGHVTTAYDLALIMRAAYQ 175

Query: 180 D-------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGM-----KTGFTCASGFN 227
           +         +   Y      +   K   N N     +           K G+T  +   
Sbjct: 176 NEDLVRIAQTESHKYVNHPFSDGSEKWATNRNQLFNEYTPYYYQYAYIGKNGYTPEANHT 235

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
             A+A++ +Q L+  +L A D++        L   GF N    K IN         N   
Sbjct: 236 YTATAMKDEQFLVVALLNATDKDNFYTNIGPLFDYGFDNFETIKLINK--------NDVL 287

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +   I++++        +      + ++  S+ +D++K  + K  I K
Sbjct: 288 DTYKINDDISIPLLAKDDLYYTKSKTEEIPSYTVDYQKKDISKKNINK 335


>gi|330838298|ref|YP_004412878.1| Serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
 gi|329746062|gb|AEB99418.1| Serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
          Length = 379

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 15/248 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L++  TG V+ E   D    PAS+TK+MT  +     +         + ++ 
Sbjct: 129 SMTADAAILMNARTGEVLYEKNGDKREYPASMTKMMTCILSVESGRA-------DLAVTI 181

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                    +  + G    L +  + +++ S N  A+AIAE+L  +E +F   MN  ++ 
Sbjct: 182 TPFAADVETTRVRPGEQARLRDLTRQMMLISDNGAALAIAETLGGSEAQFAAMMNRKARE 241

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------- 197
           +G   THF+N +G+    HY+TA D+A+++     + P++      K   I         
Sbjct: 242 IGAFHTHFVNPNGMPDANHYSTAHDIALIAAYGLRN-PEFRKIVGTKASTIYYLQPAGYK 300

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
               NTN  + ++ G  G+KTG+T A+G  + ASA++GD  LIAV++ + D +TR   +A
Sbjct: 301 TYCENTNALLYSYPGCTGLKTGWTRAAGGCLAASAVRGDTELIAVVMHSDDEDTRASEAA 360

Query: 258 SLLSMGFY 265
           +LL  GF 
Sbjct: 361 ALLDYGFS 368


>gi|163844056|ref|YP_001628460.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
 gi|163674779|gb|ABY38890.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
          Length = 370

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 1   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 57  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 117 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 176

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQ+ HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 177 FPQHAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 236

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 237 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 295

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 296 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 336


>gi|291561741|emb|CBL40540.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SS3/4]
          Length = 514

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 34/301 (11%)

Query: 1   MRQFLVIIAMAMLSN---------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L I     L                    +       L+D N+G V+ E     P+
Sbjct: 1   MKRILSIFLCLTLILGFCPGQTAYAAAEWPSEISISSDGGILMDINSGAVLFEKNSHEPY 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF---KKGSTMTLDNAL 108
            PAS+TK++TA +V          L   +T S  A      NS+    + G T+++ + L
Sbjct: 61  YPASITKILTALIVIENC-----GLDETVTFSNTAVNSLEPNSSILGARAGDTLSVRDCL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             L+++SAN++A A+AE    +   F + MN  +  LG + +HF N  G+    HY +A 
Sbjct: 116 YALLLQSANEVANALAEHCAGSIDAFAEKMNEKTAELGCTDSHFANPSGLNDPNHYVSAY 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEI---------KGKKYPNTNWAVG-----TFLGAD 214
           DMA+++     + P ++        ++          G +Y   +  +       + GA 
Sbjct: 176 DMALIAK-AAFNNPTFVEVDSTTYYDVPAGKLKQYPDGWRYYAHHRMLRRNDSLYYDGAI 234

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G KTG+T  +G  +V  A +    LIAV+L      T    + +L   GF N       +
Sbjct: 235 GGKTGYTLLAGNTLVTCAERDGMKLIAVVLN--GHQTHYSDTKALFDYGFKNFKSVPVAD 292

Query: 275 Y 275
            
Sbjct: 293 Q 293


>gi|261410081|ref|YP_003246322.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. Y412MC10]
 gi|261286544|gb|ACX68515.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. Y412MC10]
          Length = 323

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 74/293 (25%), Positives = 121/293 (41%), Gaps = 28/293 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +++L ++ M ++      + I                  L+D NTG ++     D P  P
Sbjct: 3   KRWLWLVMMLLIIVPIGAVVIGNIERAGFKPKVDARAVVLMDLNTGRILLSENGDVPLPP 62

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS++KLMT  V+   +K  K      + IS  AS+        K G  +T+    + + V
Sbjct: 63  ASMSKLMTELVILDDIKTGKRSWDDEVKISDTASDVRGVKIALKSGEILTVRELFQSITV 122

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT------------HFMNAHGVVQH 161
            SAND +VA+AE    +E+ FV+ MN  +K +GLS+                        
Sbjct: 123 YSANDASVALAEHFAGSEEAFVRKMNAKAKEIGLSSATRFVNASGVEQGTANGHAWSSDG 182

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWA------VGTFLGA 213
               TA D A L+  +    P  +        +I G+     NTNW         ++ G 
Sbjct: 183 ETVMTAEDTAKLAAHLIRSHPDILSTSSKTQTKISGRNLYLSNTNWMLPSLGGPYSYEGT 242

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           DG+K G+T  +G+    +A +    LIAV++G   +  R + +  L   GF  
Sbjct: 243 DGLKAGYTANAGYCFTGTAEKQGSRLIAVVMGTESKEARFEETRKLFDYGFSK 295


>gi|187778439|ref|ZP_02994912.1| hypothetical protein CLOSPO_02033 [Clostridium sporogenes ATCC
           15579]
 gi|187772064|gb|EDU35866.1| hypothetical protein CLOSPO_02033 [Clostridium sporogenes ATCC
           15579]
          Length = 418

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 76/316 (24%), Positives = 129/316 (40%), Gaps = 17/316 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D+ TG +I    PD P+ PAS TK+MTA +        +  L   +TI +
Sbjct: 33  KIAADGVVLMDSKTGKIIYSKNPDKPYPPASTTKIMTALLTLE-----RGNLDDIVTIGR 87

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S     +G  + + + L  L++ SAND A A+AE L  +   F + MN  +K 
Sbjct: 88  KPPLADGSKIYILEGEKIKVRDLLYGLLLASANDCAEALAEYLSGSLDNFSKDMNKRAKE 147

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------HYFQIKGLEIKGK 198
           LG ++T+F+N  G+    H T+ARD+AI+   +              +         + +
Sbjct: 148 LGCTSTNFVNPSGLYNDKHRTSARDLAIIMNELVKQPEYSKIATTLSYNIPPTNKSKEKR 207

Query: 199 KYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
              N N      +   + G +G KTG+T  S  + VAS  + +  LI  ++         
Sbjct: 208 PLWNENRLIQKHSNFYYKGCEGGKTGYTVQSDHSYVASVNKNNHRLIVALVH-DKEKNFF 266

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
             +  L + GF N T     +         N + +VP  + E     K   +  T     
Sbjct: 267 DDAVKLFNYGFNNFTLNLLYSKDSYVTTYTNDNLKVPLYASEDFYYLKPKDDNTTPDLRL 326

Query: 314 KDKESHFIDFEKITLL 329
           ++     + F+K  ++
Sbjct: 327 ENTNLKNLKFKKGDVV 342


>gi|169346809|ref|ZP_02865760.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens C str.
           JGS1495]
 gi|169297091|gb|EDS79213.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens C str.
           JGS1495]
          Length = 444

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 82/329 (24%), Positives = 139/329 (42%), Gaps = 17/329 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 20  FIFSLILSTNVFAESNV-PEIKGEGMVLMDGPTGEVLAEKNANEKLAPASTTKTMTALLT 78

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 79  VEKA-----NLNDVVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-----RIKTD 180
            +  +E+KF + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 134 HISGSEEKFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNAASKNPIIDE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 194 ITKKTVYEMPKSIVSGEPIWANNNNQLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 253

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +                ++  
Sbjct: 254 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFDNFSLVKLYSKNDVVKEYYIDDKNTLSLVV 313

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDF 323
                +    +    +   + K++  IDF
Sbjct: 314 PEDIYKTFKNSEIENLSTDEIKKNLNIDF 342


>gi|38142301|dbj|BAD00953.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142327|dbj|BAD00966.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 413

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/367 (20%), Positives = 150/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++TNTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVETNTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKTPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|251777766|ref|ZP_04820686.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243082081|gb|EES47971.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 438

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 136/344 (39%), Gaps = 22/344 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLS-IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +  +  +++ ++S+I    +            L+D +TG ++    PD    PAS TK+M
Sbjct: 6   KILIFFLSIFLVSSINVMAASAPPEINAEGSVLMDASTGEILFSKNPDKVLEPASTTKVM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +           L   + ++++ ++   +     KG  +T+ + L  L+++S ND A
Sbjct: 66  TAILTLENCD-----LNEEVVVTEDFTKVDGTTIGLLKGDIVTVKDLLLGLLLESGNDAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+A  +  +  KF   MN  +  +G   THF N  G+    H TTA D+A++      +
Sbjct: 121 NALACHISSSIDKFAVLMNKKTIEIGAVNTHFKNPSGLPDPEHLTTAHDLALIMNEAIKN 180

Query: 181 F------PQYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIV 229
                      +   IK    +     N N       +  +      K G+T  S     
Sbjct: 181 DKFLELSKVMTYEIPIKNDSSRTIWINNKNHMINKNSMYYYPYTLAGKNGYTTKSNHTYA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-DFYQQNLSNE 288
            +A      L+A  L ALD+N   +   ++ + GF N           + D  + N    
Sbjct: 241 IAAENNGHILVASYLNALDKNKNFEDMKTVFNYGFNNFYFSTIYKKGQEIDSIKLNNDIV 300

Query: 289 VPNISEEV---CTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           VP I+ +        +     NT +K  +DK  +   F K  ++
Sbjct: 301 VPLIASKDVNCVVPNENKDKLNTYIKF-EDKNLNRSSFNKGDVI 343


>gi|256045637|ref|ZP_05448515.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112362|ref|ZP_05453283.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|256263050|ref|ZP_05465582.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|260562941|ref|ZP_05833427.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|265992060|ref|ZP_06104617.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993797|ref|ZP_06106354.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|260152957|gb|EEW88049.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|262764778|gb|EEZ10699.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|263003126|gb|EEZ15419.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092926|gb|EEZ17101.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|326410032|gb|ADZ67097.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis M28]
 gi|326539748|gb|ADZ87963.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis
           M5-90]
          Length = 371

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L+A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 238 LLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 296

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 297 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 337


>gi|188589932|ref|YP_001919969.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188500213|gb|ACD53349.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 438

 Score =  165 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 136/344 (39%), Gaps = 22/344 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLS-IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +  +  +++ ++S+I    +            L+D +TG ++    PD    PAS TK+M
Sbjct: 6   KILIFFLSIFLVSSINVMAASAPPEINAEGSVLMDASTGEILFSKNPDKVLEPASTTKVM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +           L   + ++++ ++   +     KG  +T+ + L  L+++S ND A
Sbjct: 66  TAILTLENCD-----LNEEVVVTEDFTKVDGTTIGLLKGDIVTVKDLLLGLLLESGNDAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+A  +  +  KF   MN  +  +G   THF N  G+    H TTA D+A++      +
Sbjct: 121 NALACHISSSIDKFAVLMNKKAIEIGAINTHFKNPSGLPDPEHLTTAHDLALIMNEAIKN 180

Query: 181 F------PQYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIV 229
                      +   IK    +     N N       +  +      K G+T  S     
Sbjct: 181 DKFLELSKVMTYEIPIKNDSSRTIWINNKNHMINKNSMYYYPYTLAGKNGYTTKSNHTYA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-DFYQQNLSNE 288
            +A      L+A  L ALD+N   +   ++ + GF N           + D  + N    
Sbjct: 241 IAAENNGHILVASYLNALDKNKNFEDMKTVFNYGFNNFYFSTIYKKGQEIDSIKLNNDIV 300

Query: 289 VPNISEEV---CTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           VP I+ +        +     NT +K  +DK  +   F K  ++
Sbjct: 301 VPLIASKDVNCVVPNENKDKLNTYIKF-EDKNLNRSSFNKGDVI 343


>gi|163869341|ref|YP_001610597.1| penicillin-binding protein [Bartonella tribocorum CIP 105476]
 gi|161019044|emb|CAK02602.1| penicillin-binding protein [Bartonella tribocorum CIP 105476]
          Length = 363

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 116/326 (35%), Positives = 186/326 (57%), Gaps = 12/326 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++    +  + + ++    S+A+      +  +D  T H++  N     W PASLTKLM
Sbjct: 1   MQRLFYNLFFSFILSLSSTFSLAQP-----FISVDVTTEHILKHNQAFERWYPASLTKLM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV+F  +   +     PITIS+ A++ P   S +K GS +TLD AL + +VKS ND+A
Sbjct: 56  TAYVIFRAMSRGEISPNKPITISEYAAKAPSYRSGYKAGSVLTLDTALSITMVKSTNDLA 115

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A++E++  ++K FV+ MN+ +K LG+  THF NA G+    +Y+TARD+A+L+ +I+ +
Sbjct: 116 IAMSEAIAGSQKDFVRKMNSEAKRLGMFGTHFANASGLPDPQNYSTARDIALLAVQIRRE 175

Query: 181 FPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF I  ++    +    N+N  +G F G DGMKTGF CASGFN+VASA +  ++
Sbjct: 176 FPQYAHYFSIPAIDFGNNRKIQHNSNNLIGRFYGIDGMKTGFICASGFNLVASATRNKRT 235

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IAVILGA + + R + +A LL +GF ++   +     +K +          N+ ++ CT
Sbjct: 236 IIAVILGANNVSEREEKAAQLLEIGFLHQGSPQLTLATLKPYGSNITQAN--NMRQQTCT 293

Query: 299 T---QKEIINYNTQMKEAKDKESHFI 321
               +    +Y+ Q            
Sbjct: 294 PEAIKMHANSYDDQGNIILTSPFITA 319


>gi|254500491|ref|ZP_05112642.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
 gi|222436562|gb|EEE43241.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
          Length = 558

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 88/316 (27%), Positives = 151/316 (47%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + + + +    ++A  N      ++D  TG  +     D    PASLTK+MT Y++F  
Sbjct: 8   MLVVGTLVLCAPTVASANPKYAGIVVDAKTGKTLYAANADAYRFPASLTKIMTTYIIFEE 67

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           L+  +  +++ + +SKNA+   PS    K GST+++ +A+  L+ KSAND+A  +AE++ 
Sbjct: 68  LEAGRLSMSSRLKVSKNAAAEVPSKLGLKPGSTISVKDAIGALVTKSANDVATTVAENIA 127

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +E  F + M  T++ LG+S T F NAHG+      TTARDMA L   I+  FP+    F
Sbjct: 128 GSEAAFARRMTRTARQLGMSKTTFRNAHGLPNSKQRTTARDMATLGRAIQERFPERYKLF 187

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             +  + KG+   N N  +G+  G DG+KTG+  ASGFN+V S  + ++ ++AV++G   
Sbjct: 188 NTRVYKYKGRNLRNHNRLLGSVKGVDGIKTGYIRASGFNLVTSVQRNNRHIVAVVMGGRT 247

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              RN     L+    +  +   +   +I         +        +   +        
Sbjct: 248 GARRNAHMTDLIGRYLHKASRGTRTAPLIASAGPVFAFDAASLKEPPLPANKPGGGIAPP 307

Query: 309 QMKEAKDKESHFIDFE 324
                    S +   +
Sbjct: 308 ATGAPVVLASAYAPVK 323


>gi|254372818|ref|ZP_04988307.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           tularensis subsp. novicida GA99-3549]
 gi|151570545|gb|EDN36199.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           novicida GA99-3549]
          Length = 444

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 147/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVAMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKGLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLKAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKTGQTVGNLVI 418


>gi|227823262|ref|YP_002827234.1| putative D-alanyl-D-alanine carboxypeptidase [Sinorhizobium fredii
           NGR234]
 gi|227342263|gb|ACP26481.1| putative D-alanyl-D-alanine carboxypeptidase [Sinorhizobium fredii
           NGR234]
          Length = 372

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 119/308 (38%), Positives = 180/308 (58%), Gaps = 2/308 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+ +L+ +   L+ A         ++D  T  V         W PASLTKLMTAY  F  
Sbjct: 14  AIGVLAGVCAALAAALPVSANPRLVVDVATLKVYEHQDIFQKWYPASLTKLMTAYTTFQA 73

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +K  +  L +P+ ++KNA+  PPS   +K G  MTLD+ALK+++VKSAND+AVAIAE++ 
Sbjct: 74  IKAGQLTLESPVVMTKNAASEPPSKMFYKPGQAMTLDSALKMMLVKSANDVAVAIAETVS 133

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +E+ F+  MN  ++ +G++++HF+NA+G+   G YTTARD+A+L+  +K +FPQY  YF
Sbjct: 134 GSEQAFIDRMNAEARRIGMTSSHFINANGLPGQGQYTTARDLAVLAITLKREFPQYASYF 193

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            ++G     K Y N N  +G F GADGMKTGF CASGFN V+SA +  +S+++V+LG   
Sbjct: 194 SLEGFTTGKKDYANYNMLIGRFEGADGMKTGFICASGFNQVSSATRAGRSVVSVVLGEDS 253

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              R   SA LL M        K     I  + +      V ++S+E+C+ Q   +    
Sbjct: 254 LGARADESARLLQMALTTSAAEKPSLTAIAPYGE--SREVVADVSKEICSKQAAKVRSEG 311

Query: 309 QMKEAKDK 316
           + +  + K
Sbjct: 312 RDEAGRQK 319


>gi|161619952|ref|YP_001593839.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|189025096|ref|YP_001935864.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
 gi|254696286|ref|ZP_05158114.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254705040|ref|ZP_05166868.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis bv. 3 str. 686]
 gi|161336763|gb|ABX63068.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|189020668|gb|ACD73390.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
          Length = 370

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 1   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 57  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 117 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 176

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 177 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 236

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 237 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 295

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 296 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 336


>gi|306839705|ref|ZP_07472507.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NF 2653]
 gi|306405165|gb|EFM61442.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NF 2653]
          Length = 370

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 1   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 57  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 116

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 117 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 176

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 177 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 236

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 237 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPTQTANLNQAV-DMRKAICS 295

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 296 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 336


>gi|154483610|ref|ZP_02026058.1| hypothetical protein EUBVEN_01314 [Eubacterium ventriosum ATCC
           27560]
 gi|149735520|gb|EDM51406.1| hypothetical protein EUBVEN_01314 [Eubacterium ventriosum ATCC
           27560]
          Length = 387

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 10/325 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +F   S           L++++TG V+ EN  +   +PAS+TK+MT  ++F  +   K  
Sbjct: 19  VFGEESHELNIDSKSCVLMESSTGMVLYENNQNEKLSPASITKIMTLVLIFDAIHSGKIK 78

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           LT   T S  A     S    ++G T T++  +K +I+ S ND +V +AE +  +E+ FV
Sbjct: 79  LTDVATTSAYAKSMGGSQVFLEEGETQTVETLIKCIIIASGNDASVVMAEMIAGSEEAFV 138

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           + MN  +K+LG++ THF++  G+     HYTTA+D+A++S  +   +P+   Y  I    
Sbjct: 139 KKMNERAKSLGMNNTHFIDCCGLTDSDDHYTTAKDVALMSRELIEKYPEIFKYSTIWMES 198

Query: 195 IKGKK--------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           I  K           NTN  + T     G+KTG T  + + +   A +    LIAV++ A
Sbjct: 199 ITHKTKAGEKEFVLSNTNKLLKTNQYVKGLKTGSTSKAKYCVSTVAEKDGVQLIAVVMAA 258

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS-EEVCTTQKEIIN 305
            D   R K S  L++ GF N       +         N   +  +IS         +  +
Sbjct: 259 PDYKIRFKESEKLINYGFSNCKVYTDNDGYKTKIKVTNGKKDKVDISTNRFSYVDTKGRD 318

Query: 306 YNTQMKEAKDKESHFIDFEKITLLK 330
            +   K+    +      +K   + 
Sbjct: 319 LSKVTKKVFVNKKVKAPVKKNQKVG 343


>gi|208779297|ref|ZP_03246643.1| D-alanyl-D-alanine carboxypeptidase [Francisella novicida FTG]
 gi|254374319|ref|ZP_04989801.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           novicida GA99-3548]
 gi|151572039|gb|EDN37693.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           novicida GA99-3548]
 gi|208745097|gb|EDZ91395.1| D-alanyl-D-alanine carboxypeptidase [Francisella novicida FTG]
 gi|332678194|gb|AEE87323.1| D-alanyl-D-alanine carboxypeptidase [Francisella cf. novicida Fx1]
          Length = 444

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 147/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVAMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKGLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKTGQTVGNLVI 418


>gi|260461046|ref|ZP_05809295.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
 gi|259033080|gb|EEW34342.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium
           opportunistum WSM2075]
          Length = 297

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 86/251 (34%), Positives = 137/251 (54%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            +  +     L++    +     ++D  TG  + E        PASLTK+MT Y++F  +
Sbjct: 26  CSTTTPPDSVLAVPAPPQKYAAIVVDAQTGKQLFEVNSTAQRYPASLTKMMTLYLLFEAM 85

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              +    T I +S +A+  PP+   F++G T+ +D+A++ ++VKSAND+AVA+ E L  
Sbjct: 86  DSGRVTKETQIPVSDHAASQPPTKMRFRRGETIDVDSAIRAIVVKSANDVAVAVGEYLGG 145

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E +F   M + ++ LG+++T F NA G+      TTARDMA+L   + + FPQ+ HYF 
Sbjct: 146 SEDQFAAMMTSKARQLGMTSTTFRNASGLPDDSQMTTARDMALLGMALHSRFPQHFHYFS 205

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                 +G+     N  +G   G DG+KTG+  ASGFNIV S     + LI V++GA   
Sbjct: 206 ESDFMFRGRLVRGHNDMLGRVRGVDGIKTGYIRASGFNIVTSYNADGRRLIVVVMGADSA 265

Query: 250 NTRNKVSASLL 260
             RN    +L+
Sbjct: 266 RQRNDHVEALI 276


>gi|293365274|ref|ZP_06611991.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus oralis ATCC
           35037]
 gi|291316724|gb|EFE57160.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus oralis ATCC
           35037]
          Length = 413

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/366 (18%), Positives = 140/366 (38%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIAMAMLS-NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++     ++        +        +   ++  TG ++ E   + P   AS+TKL
Sbjct: 1   MKKIILSFMTLLVFGTASTVSAQEFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L++    L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  VTVYLVYEALEQGTISLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATMVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +       G +  +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIRDYPQVLEITKKPTSTFAGLEIHSTNYMLEGMPAYRGGIDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   +++LL     N   +  + 
Sbjct: 241 GTTDKAGASFVGTTVEKGMRIITVVLNADQQDTNPYARFTATSALLDYISANFALKTVVQ 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             N       ++   Q+        ++      S     E+  +
Sbjct: 301 KGEAYNDSKVTVLDGKEDNVTAVAKSDISIVQRIGSGTTPALQFTPKSTSEMAPLEEGKV 360

Query: 329 LKNKIT 334
           +     
Sbjct: 361 VGTLTY 366


>gi|255505895|ref|ZP_05348727.3| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
 gi|255265270|gb|EET58475.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
          Length = 625

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 75/324 (23%), Positives = 134/324 (41%), Gaps = 23/324 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN  P     +        L+D +TG ++     +    PAS+TK+MT  +         
Sbjct: 60  SNNIPNWPQGDPVNAETAILMDADTGAILYAKSIEKQEYPASITKIMTTLIALEK----- 114

Query: 74  AMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             L+  +T S+NA     Y  S+     G  +TL+  L  +++ SAN+I+ A+AE +   
Sbjct: 115 GNLSDVVTFSENAVYSIEYGSSHLGLTAGEELTLEQCLYGIMLASANEISNAVAEHIGGD 174

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----- 185
            + FV  MN  ++ LG + THF+N HG+    HY  A+DMA++      +          
Sbjct: 175 IETFVGMMNEKAQELGCTNTHFVNVHGLHDENHYVCAKDMALIMQAALKNEKFREIIGTV 234

Query: 186 -HYFQIKGLEIKGKKYPNTNWAVGT----FLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            + F    L  + + + N +  +      + G  G K G+T  +   +V +A +   ++I
Sbjct: 235 EYNFPETNLVDEVRYFINHHKMISEEGMLYDGCIGGKNGYTDEAWNTLVTAAERDGMTII 294

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           +V+L    +      +  LL  GF N  D +  N    D     + +       E+   +
Sbjct: 295 SVVLRCPGQYVSYDDTKVLLDYGFANFHDAQIANTNSADIEITGIEDA-----AELEKIK 349

Query: 301 KEIINYNTQMKEAKDKESHFIDFE 324
           +   +       A+ K +     E
Sbjct: 350 QADFSAAPFEMAAETKVTLPAGVE 373


>gi|241204717|ref|YP_002975813.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240858607|gb|ACS56274.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 397

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 134/340 (39%), Gaps = 8/340 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R    ++  A  +      +     K     +++  TG V+     D  ++PASL KLM
Sbjct: 6   LRLLACLMPFATGAFAADGGAAGFATKAAQAYMIEAATGTVLLAKNEDQGFSPASLAKLM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKS 115
           T  + F  L + +  L T   +S+ A     +            S + +++ +K + ++ 
Sbjct: 66  TMDLAFEALTKGQITLDTEYPVSEYAWRTGGAPSRTATMFASLKSRVRVEDLIKGVAIQG 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND  + +AE +  +E++F   M   ++ LG+    F N+ G+       TAR+M  L+ 
Sbjct: 126 ANDSCIILAEGMAGSEQQFAVSMTRRARELGMEKAEFGNSTGLPDGKSKVTAREMVTLAA 185

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            ++  +P    YF     E       N N  +G  LGADG+ TGFT   G++IVAS  + 
Sbjct: 186 ALQQTYPNLYPYFAQPDFEWNKIFQRNRNPLLGLDLGADGLATGFTEGEGYSIVASVERD 245

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNI 292
            + L   + G      R + +  +L  G     +R+       I         +  V  +
Sbjct: 246 GRRLFVALAGIASDKERTEEAKRVLEWGLTAFENRQIFGEKEVIGAASVYGGTARTVDLV 305

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++   +    I N +        +       +  T     
Sbjct: 306 AKAPVSVYIPISNPDRLSARIIYRWPLTAPVKPDTQAGTL 345


>gi|110802740|ref|YP_699397.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens SM101]
 gi|110683241|gb|ABG86611.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens SM101]
          Length = 427

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 19/322 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            I ++ + +N+F   ++    K     L+D  TG V+AE   +    PAS TK MTA + 
Sbjct: 3   FIFSLILSTNVFAESNV-PEIKGEGMVLMDGTTGEVLAEKNANEKLAPASTTKTMTALLT 61

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                     L   +TI KN      +    ++G   T++  L  L+++SAND AVA+AE
Sbjct: 62  VEKA-----NLNDIVTIGKNPPLAEGTRVGLQEGDKYTVEELLNALLIQSANDAAVALAE 116

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS-----WRIKTD 180
            +  +E +F + MN  ++ LG   THF+NA G+ +  H TT  D+A++        I  +
Sbjct: 117 HISGSEGEFAKLMNERAEELGAKNTHFVNASGLFEDDHMTTPYDLALIMNAASKNPIIDE 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +   Y   K +      + N N                  KTG+T  S      +A +
Sbjct: 177 ITKKTVYEMPKSIVSGEPIWANNNNKLIHQTSPYYNKDIFCNKTGYTTKSRHTFTCAAKR 236

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVPNI 292
           GD+ LI  +LG   ++   + + +LL  GF N +  K  +   +IK++Y  + +N     
Sbjct: 237 GDRKLILTLLGYDTKDQYYEDTKNLLDYGFNNFSLVKLYSKNDVIKEYYIDDKNNLSLLA 296

Query: 293 SEEVCTTQKEIINYNTQMKEAK 314
            E++  T K     N    E K
Sbjct: 297 PEDIYKTFKNSEIENLSTDEIK 318


>gi|260888386|ref|ZP_05899649.1| serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
 gi|260861922|gb|EEX76422.1| serine-type D-Ala-D-Ala carboxypeptidase [Selenomonas sputigena
           ATCC 35185]
          Length = 354

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 15/248 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L++  TG V+ E   D    PAS+TK+MT  +     +         + ++ 
Sbjct: 104 SMTADAAILMNARTGEVLYEKNGDKREYPASMTKMMTCILSVESGRA-------DLAVTI 156

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                    +  + G    L +  + +++ S N  A+AIAE+L  +E +F   MN  ++ 
Sbjct: 157 TPFAADVETTRVRPGEQARLRDLTRQMMLISDNGAALAIAETLGGSEAQFAAMMNRKARE 216

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------- 197
           +G   THF+N +G+    HY+TA D+A+++     + P++      K   I         
Sbjct: 217 IGAFHTHFVNPNGMPDANHYSTAHDIALIAAYGLRN-PEFRKIVGTKASTIYYLQPAGYK 275

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
               NTN  + ++ G  G+KTG+T A+G  + ASA++GD  LIAV++ + D +TR   +A
Sbjct: 276 TYCENTNALLYSYPGCTGLKTGWTRAAGGCLAASAVRGDTELIAVVMHSDDEDTRASEAA 335

Query: 258 SLLSMGFY 265
           +LL  GF 
Sbjct: 336 ALLDYGFS 343


>gi|319899049|ref|YP_004159142.1| penicillin-binding protein [Bartonella clarridgeiae 73]
 gi|319403013|emb|CBI76568.1| penicillin-binding protein [Bartonella clarridgeiae 73]
          Length = 449

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 5/312 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++ ++ + + ++S  +   +  E +       ++D NTG  + +        PASLTK+M
Sbjct: 13  KKVVIPLIVLVISYSWALATPKEAHPDKYAAIVIDANTGKTLFQANATLKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  +K ++    TPI IS  A+  PP+    K G T+++++A K LI KSAND+A
Sbjct: 73  TLYMIFEAMKNRRITPNTPIPISNYAATRPPTKMGIKAGQTISVESAAKALITKSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI E L  +E+KF Q M   ++ LG+  T F NA G+    +Y+TA+DMA L+  ++  
Sbjct: 133 TAIGEYLGGSEQKFAQMMTVKARKLGMKNTRFANASGLPDTRNYSTAQDMATLALALRKH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F++     +G+   + N  + T  G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPEQYKLFKMTHFRFRGQTINSHNTLIKTIKGIDGIKTGYTQMSGSNLATSMRIDGRSIV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV++G     TR+   ASLL         +       +              +  +   +
Sbjct: 253 AVVMGGKSSTTRDIHMASLL----KQYLPKASRTKTDEHLVATTHYKLPTGSATPIPIIK 308

Query: 301 KEIINYNTQMKE 312
             +IN + ++  
Sbjct: 309 NNLINSDDEIST 320


>gi|23502884|ref|NP_699011.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|62290881|ref|YP_222674.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82700793|ref|YP_415367.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis biovar
           Abortus 2308]
 gi|237816389|ref|ZP_04595382.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|254690170|ref|ZP_05153424.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 6 str.
           870]
 gi|254694661|ref|ZP_05156489.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 3 str.
           Tulya]
 gi|254700670|ref|ZP_05162498.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis bv. 5 str. 513]
 gi|254731203|ref|ZP_05189781.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 4 str.
           292]
 gi|256060003|ref|ZP_05450185.1| D-alanyl-D-alanine carboxypeptidase [Brucella neotomae 5K33]
 gi|256258424|ref|ZP_05463960.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 9 str.
           C68]
 gi|256370435|ref|YP_003107946.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|260546143|ref|ZP_05821883.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260567492|ref|ZP_05837962.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|260755709|ref|ZP_05868057.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260758934|ref|ZP_05871282.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260760656|ref|ZP_05872999.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260884736|ref|ZP_05896350.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|261214985|ref|ZP_05929266.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|261323978|ref|ZP_05963175.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261751178|ref|ZP_05994887.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|261755741|ref|ZP_05999450.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|294851267|ref|ZP_06791940.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NVSL 07-0026]
 gi|297247266|ref|ZP_06930984.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 5 str.
           B3196]
 gi|306842839|ref|ZP_07475479.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO2]
 gi|23348913|gb|AAN30926.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|62197013|gb|AAX75313.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82616894|emb|CAJ11993.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella
           melitensis biovar Abortus 2308]
 gi|237788456|gb|EEP62671.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|256000598|gb|ACU48997.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|260096250|gb|EEW80126.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260157010|gb|EEW92090.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|260669252|gb|EEX56192.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260671088|gb|EEX57909.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260675817|gb|EEX62638.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260874264|gb|EEX81333.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|260916592|gb|EEX83453.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|261299958|gb|EEY03455.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261740931|gb|EEY28857.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|261745494|gb|EEY33420.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|294819856|gb|EFG36855.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NVSL 07-0026]
 gi|297174435|gb|EFH33782.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 5 str.
           B3196]
 gi|306287033|gb|EFM58544.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO2]
          Length = 371

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 238 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 296

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 297 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 337


>gi|157825663|ref|YP_001493383.1| penicillin-binding protein dacF precursor [Rickettsia akari str.
           Hartford]
 gi|157799621|gb|ABV74875.1| penicillin-binding protein dacF precursor [Rickettsia akari str.
           Hartford]
          Length = 306

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 92/286 (32%), Positives = 142/286 (49%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFIVTFFFAPISEAKKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIRVYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  +++ K  L   + +S+ AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEDGKLSLDQKLLVSQKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNIKAKQLGMKNTYFKNASGWHDPLQLTTARDMAKLTMALKKDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KYYPLFSKTSFVFRGNIVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  ++  +      N S  
Sbjct: 250 VTGGKSAASRDQKMMWLLD---QHFNIKPIVHKPLIKLASNNKSTT 292


>gi|254713557|ref|ZP_05175368.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti M644/93/1]
 gi|254716088|ref|ZP_05177899.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti M13/05/1]
 gi|261217856|ref|ZP_05932137.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261321294|ref|ZP_05960491.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|260922945|gb|EEX89513.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261293984|gb|EEX97480.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
          Length = 371

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 238 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 296

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 297 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 337


>gi|92117941|ref|YP_577670.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrobacter hamburgensis
           X14]
 gi|91800835|gb|ABE63210.1| Serine-type D-Ala-D-Ala carboxypeptidase [Nitrobacter hamburgensis
           X14]
          Length = 586

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 86/296 (29%), Positives = 153/296 (51%), Gaps = 5/296 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  ++   PD   +PASLTK+MT Y++F  L   K  L T + +S +A+  
Sbjct: 56  ASIIVDANSGATLSSTNPDSLRHPASLTKMMTLYLLFERLDAGKINLDTEMRVSGHAAAQ 115

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G T+ +++A+K L+ KSAND AV IAE++   E  F + M   ++ LG++ 
Sbjct: 116 DPTKLGLRSGQTIRVEDAIKGLVTKSANDAAVVIAEAVGGDEDDFARMMTRKARALGMTR 175

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T + NA G+      TTARD A L   ++  FP+Y  YF       +G+     N  +G+
Sbjct: 176 TVYRNASGLPDDDQVTTARDQATLGRALQDRFPRYYRYFATTSFTFRGRTIRGHNHLLGS 235

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+  +SGFN+V +  +G++ L+ V+LG     +R+     LL+        
Sbjct: 236 VDGVDGIKTGYIRSSGFNLVTNLKRGNRHLVGVVLGGRSSGSRDATMRKLLTDNLDKAAT 295

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFE 324
           R+ +  I +     + ++    ++E+   ++ + +   +  ++ A   E   +  E
Sbjct: 296 RRTVAAITES----STADANAQVAEDQARSRPKGMKQVDGAVQVASAPEPVALPTE 347


>gi|254718081|ref|ZP_05179892.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. 83/13]
 gi|265983032|ref|ZP_06095767.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|264661624|gb|EEZ31885.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
          Length = 371

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 191/341 (56%), Gaps = 11/341 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 238 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPTQTANLNQAV-DMRKAICS 296

Query: 299 TQKEIINYNTQMKEAKDK----ESHFIDFEKITLLKNKITK 335
            Q     ++ +  E + K      H +D + I +    +++
Sbjct: 297 EQAMADRWDGREVEGRLKINSPYIHAMDHDPIAVQVRLVSE 337


>gi|121602290|ref|YP_988886.1| D-alanyl-D-alanine carboxypeptidase [Bartonella bacilliformis
           KC583]
 gi|120614467|gb|ABM45068.1| D-alanyl-D-alanine carboxypeptidase [Bartonella bacilliformis
           KC583]
          Length = 448

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 151/311 (48%), Gaps = 5/311 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +   I  +  +++     +  +          ++D NTG  + +        PASLTK+M
Sbjct: 13  KKTAIFLVIFVASYSWVEAAPKGVHADKYAAIVIDANTGKTLFQANATMRRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  ++ ++    TPI IS  AS  PP+    K G T+ ++ A K LI KSAND+A
Sbjct: 73  TLYMLFEAMQVRRVAPNTPIPISAYASTRPPTKIGLKTGQTIPVEAAAKALITKSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI E L  +E+KF Q M   ++ LG+  T+F NA G+    +Y+TA+D+AILS  ++  
Sbjct: 133 AAIGEYLGGSEQKFAQMMTVKARQLGMINTNFANASGLPDTRNYSTAQDLAILSLALREH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQ    F+IK     GK   + N  V T  G DG+KTG+T  SG N+  S   G +S++
Sbjct: 193 FPQQYKLFKIKSFVFHGKIINSHNKLVQTMKGVDGIKTGYTQMSGSNLATSMRLGGRSIV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV++G      R+   A+LL+      +  K    ++      NL          +   +
Sbjct: 253 AVVMGGKSSVERDIHMANLLNKYLPKASPVKTDKRLVAAATYHNL---PTGAKAPIPVAK 309

Query: 301 KEIINYNTQMK 311
               N    + 
Sbjct: 310 ANSRNLEDDIS 320


>gi|254714078|ref|ZP_05175889.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|254716865|ref|ZP_05178676.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261218667|ref|ZP_05932948.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261321835|ref|ZP_05961032.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|260923756|gb|EEX90324.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261294525|gb|EEX98021.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
          Length = 396

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 90/337 (26%), Positives = 144/337 (42%), Gaps = 11/337 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KL+TA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLITAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFAGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              P+Y  Y++            N N  +   +GADGM TGFT ASG+ +V SA Q  + 
Sbjct: 195 AAHPEYYRYYEQPAYTWNNITQRNRNPLLRLEVGADGMGTGFTEASGYALVGSAEQNGRR 254

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNI 292
           L   + G      R + +  L+  G     D +      K    Q    +      V   
Sbjct: 255 LFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAANDKVGDAQVFGGQSSTLPLVVKK 314

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             E+   ++       ++      ++      ++  L
Sbjct: 315 DVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRL 351


>gi|307946404|ref|ZP_07661739.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Roseibium sp.
           TrichSKD4]
 gi|307770068|gb|EFO29294.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Roseibium sp.
           TrichSKD4]
          Length = 492

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 95/320 (29%), Positives = 160/320 (50%), Gaps = 1/320 (0%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R   ++ +  +++ +    +        Y   ++D  TG  +  +  D    PASLTK+M
Sbjct: 11  RHVRIVGSALLIAGMTAAGTAPAAANSKYAGIVVDAKTGKTLYADSADAYRYPASLTKIM 70

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+VF  L+  +  L +   +SKNAS+ PPS    + G T+ + +A+  L+ KSAND+A
Sbjct: 71  TLYIVFEELEAGRLSLNSKFKVSKNASKEPPSKIGLRPGQTIKVKDAILALVTKSANDVA 130

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
             +AE++  +E KF + M NT++ LG+  T F NAHG+      TTARDM+ L   I+  
Sbjct: 131 TTVAENIAGSEAKFAKRMTNTARQLGMKRTTFRNAHGLPNSRQRTTARDMSRLGIAIQER 190

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+Y  YF  +    KG++Y N N  +G   G DG+KTG+  ASGFN+V S  +  + ++
Sbjct: 191 FPKYYKYFNTRVYSYKGRRYGNHNKLLGRVKGVDGIKTGYIRASGFNLVTSVNRNGRHIV 250

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV++G     +RN+   +L+    +  +  +K   ++    +Q         +  +   +
Sbjct: 251 AVVMGGRTGASRNRHMTNLIGRYLHKASKGRKSAPLVAKVKRQPAFVAASMKNVPMPNGK 310

Query: 301 KEIINYNTQMKEAKDKESHF 320
                  T    A    +  
Sbjct: 311 PGSKTIKTSPVLALASATPK 330


>gi|319405849|emb|CBI79481.1| Penicillin-binding protein [Bartonella sp. AR 15-3]
          Length = 449

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++  + + + ++S+ +   +  E +       ++D NTG  + +        PASLTK+M
Sbjct: 13  KKVGISLTLLVISHSWAVATPKEAHPDKYAAIVIDANTGKTLFQANAALKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  +K  +    TPI IS  A+  PP+    K G T++++ A K LI KSAND+A
Sbjct: 73  TVYMIFEAIKNGRVTPNTPIPISNYAATRPPTKIGIKAGQTISIEAATKALITKSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            AI E L  +E+KF Q M   ++ LG+  T F NA G+    +Y+TA+D+A L+  ++  
Sbjct: 133 AAIGEYLGGSEQKFAQMMTIKARKLGMKNTRFANASGLPDTRNYSTAQDIATLALALRKH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP+    F+      +G+   N N  + T  G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPEQYKLFKTTHFTFRGQTINNHNTLIKTIKGVDGIKTGYTQMSGSNLATSMRIDGRSIV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE---VPNISEEVC 297
           AV++G     TRN   A+LL       +  +    ++   + +  +     +P I + + 
Sbjct: 253 AVVMGGKSSTTRNIHMANLLKQYLPKTSRIETNKNLVATVHYKLPTVSATPIPIIKDNLI 312

Query: 298 TTQKEIINYNTQMKEAKDKESHFI 321
            +  EI +  T + E  +  +  +
Sbjct: 313 NSDDEISSLLTALAEQSNDPNTAV 336


>gi|261214059|ref|ZP_05928340.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
 gi|260915666|gb|EEX82527.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 3
           str. Tulya]
          Length = 416

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLL 260
               R+   A LL
Sbjct: 264 SAGQRDGQMAKLL 276


>gi|323704094|ref|ZP_08115696.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfotomaculum nigrificans DSM 574]
 gi|323530944|gb|EGB20881.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfotomaculum nigrificans DSM 574]
          Length = 373

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 133/333 (39%), Gaps = 31/333 (9%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     L++  TG +      D    PASLTK+MTA +           L   +T
Sbjct: 16  QPPKVRASAACLMEVATGRIYFAKQGDKRREPASLTKIMTAILAIEK-----GNLKDVVT 70

Query: 82  ISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           + K A+      +     G  + L++ LK  ++ SAND  VAI E +  +   F++ MN+
Sbjct: 71  VGKKAAAVSMGQDIGLSPGDRLYLEDLLKAALMYSANDSTVAIGEHIAGSHDAFIKMMND 130

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF------------------P 182
            +K LG+  T + N +G     HYTTA D+A L+     +                    
Sbjct: 131 KAKVLGMKDTRYANTNGYHNPNHYTTAIDLAKLTCYALKNPVFASFVRTREATITWLPKE 190

Query: 183 QYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           +  +  +++    + +   NTN      F G +G+KTG T  +G  ++ASA +  + L+A
Sbjct: 191 KTGNPQEVQTETPRQRVIHNTNALLESNFEGINGVKTGTTPRAGKCLIASATREGRQLVA 250

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCT 298
           V+L + +   R   + +LL  GF     +          +    + +  +V  ++ +   
Sbjct: 251 VVLNSPN---RWDDATNLLEYGFREFRPQVLSEKDEVMGEIPVVEGVEQKVTLVAAKKVE 307

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                I+ +   ++           ++   L  
Sbjct: 308 AYVARIDSDKVERKINLAPPPKAPIKQGIKLGK 340


>gi|110632991|ref|YP_673199.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mesorhizobium
           sp. BNC1]
 gi|110283975|gb|ABG62034.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Chelativorans
           sp. BNC1]
          Length = 287

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 86/263 (32%), Positives = 136/263 (51%), Gaps = 5/263 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL-----PYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +L  I +  +S      ++A   +          ++D  +G ++ +   D P  PASLTK
Sbjct: 13  WLAFIVLPFVSGCGSTSAVAPLVQPIESEKYSSIVVDAGSGEILHQYAADAPRYPASLTK 72

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT Y++F  +       T+ IT S  A+  PPS    + G +  +  A+  L VKSAND
Sbjct: 73  MMTLYLLFEAIDSGILSPTSRITASAYAASRPPSKLGLRPGDSFDVQTAILALCVKSAND 132

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
           +A A+AE L  TE++F   M   ++ LG+ +T F NA G+   G  TTARDMA+L+  + 
Sbjct: 133 VAAAVAEHLGGTEQQFAGMMTAKARQLGMRSTVFTNASGLPDSGQMTTARDMALLALALH 192

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             FP + H F  +    +G+     N  +G   G DG+KTG+  ASG+NI  SA +G + 
Sbjct: 193 NRFPHHYHVFANQSFAHEGRTIKGHNDLLGRVDGVDGIKTGYIRASGYNIATSAARGRKR 252

Query: 239 LIAVILGALDRNTRNKVSASLLS 261
           ++ +++G     +RN     LL 
Sbjct: 253 IVVIVMGGDTARSRNAHVERLLE 275


>gi|158320612|ref|YP_001513119.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus oremlandii
           OhILAs]
 gi|158140811|gb|ABW19123.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus oremlandii
           OhILAs]
          Length = 371

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 80/350 (22%), Positives = 137/350 (39%), Gaps = 23/350 (6%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIAE----TNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR +    I + M+    P     +            ++D  TG ++ E         AS
Sbjct: 1   MRERVFCFIIIFMMLMANPSYGQEKMKNIQTGGKSAIVMDVETGRILYEKNMHLKLPMAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +           L   + I++NA     S+   +    +   + +  L+++S
Sbjct: 61  TTKIMTALLAIEN-----IPLEKRVKINQNAQGIEGSSIYLRANEEVKAIDLVYGLMLRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND A AIA  +  + + F   MN  +  +G   T+F N HG+    HYTTA D+A+++ 
Sbjct: 116 GNDAAAAIAYEVSGSIEAFADLMNERANKIGAKNTNFTNPHGLHHENHYTTAYDLALITR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYP---NTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
               +   +    + K       +Y    N N  +    G DG+KTG+T  SG  +V+SA
Sbjct: 176 EALKN-SVFKEVVKTKFWTADRNEYKHFANKNIGLEICEGGDGVKTGYTTRSGRCLVSSA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN------KTDRKKINYIIKDFYQQNLS 286
            +     I++ L   D       +  LL  GF         T+ + I  +     ++N  
Sbjct: 235 SREGMQFISITL---DDYNWFDTNKKLLDEGFKRYRPHHIFTEEQVITSMKVLNGKKNTV 291

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              PN    V  ++ E+    T +      E+      KI  +   +  K
Sbjct: 292 FIKPNRGLIVPLSEGELERLLTVINAPDTLEAPLEKGSKIGTMVTYLDGK 341


>gi|322374431|ref|ZP_08048945.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C300]
 gi|321279931|gb|EFX56970.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C300]
          Length = 413

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 69/366 (18%), Positives = 143/366 (39%), Gaps = 32/366 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++  + + +        +        +   ++  TG ++ E   + P   AS+TKL
Sbjct: 1   MKKIILSFMTLFVFGTASTVSAQEFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L++    L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  VTVYLVYEALEQGTISLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATMVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +       G +  +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIRDYPQVLEITKKPTSTFAGLEIHSTNYMLEGMPAYRGGIDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A  ++T    R   +++LL     N   +  + 
Sbjct: 241 GTTDKAGASFVGTTVEKGMRIITVVLNADQQDTNLYARFTATSALLDYISANFALKTVVQ 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             N       ++   Q+        ++      S     E+  +
Sbjct: 301 KGETYNDSKVTVLDGKEDNVTAVAKSDISIVQRIGSGTTPTLQFTPKSTSEMAPLEEGKV 360

Query: 329 LKNKIT 334
           +     
Sbjct: 361 VGTLTY 366


>gi|306829382|ref|ZP_07462572.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus mitis ATCC
           6249]
 gi|304428468|gb|EFM31558.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus mitis ATCC
           6249]
          Length = 413

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 142/366 (38%), Gaps = 32/366 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++ ++ +     I    + +      +   ++  TG V+ E     P   AS+TKL
Sbjct: 1   MKKIIISLLTLLTFGTISTISAQSFDIAAKHAIAVEATTGKVLYEKDASQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L++    L+TP+ IS           +++   +    T++  L+  +V SA
Sbjct: 61  VTVYLVYEALEQGTISLSTPVDISDYPYHLTTNSEASNVPMEARNYTVEQLLEATMVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +       G +  +TN  +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIRDYPQVLEITKKASSTFAGLEIHSTNSMLEGMPAYRGGIDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SLL     N T +  + 
Sbjct: 241 GTTDKAGASFVGTTVEKGMRIITVVLNADQQDGNPYARFTATSSLLDYISANFTLQTVVK 300

Query: 275 YI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             +       ++   Q+      + ++      S     E+  +
Sbjct: 301 KGETYKDSKVTVLDGKEDSVPAVAKSDIAVVQRVGSGTTSALQFTPKSTSETAPLEEGKV 360

Query: 329 LKNKIT 334
           +     
Sbjct: 361 VGTLTY 366


>gi|38142333|dbj|BAD00969.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 413

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTISLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLRDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VAHLTYE 367


>gi|218682277|ref|ZP_03529878.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli CIAT 894]
          Length = 408

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/337 (21%), Positives = 132/337 (39%), Gaps = 8/337 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              ++     +      +     K     +++  TG V+     D  ++PASL KLMT  
Sbjct: 20  LAWLMPFTAAALAADSGAAGFATKAEQAYMIEAATGTVLLAKNEDQGFSPASLAKLMTMD 79

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSAND 118
           +VF  + + +  L T   +S+ A     +            S + +++ +K + ++ AND
Sbjct: 80  LVFEAVTKGQITLDTEYPVSEYAWRTGGAPSRAATMFASLKSRVRVEDLIKGVAIQGAND 139

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             + +AE +  TE++F + M   ++ LG+    F N+ G+       TAR+M  L+  ++
Sbjct: 140 SCIILAEGMAGTEQQFAESMTRRARELGMEKAEFGNSTGLPDGKSKVTAREMVTLATALQ 199

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             +P    YF     E       N N  +G  LGADG+ TGFT   G++IVAS  +  + 
Sbjct: 200 QSYPNLYPYFAQPDFEWNKIFQRNRNPLLGLDLGADGLATGFTEGEGYSIVASVERDGRR 259

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEE 295
           L   + G      R + +  +L  G      R+       I         +  V  I++ 
Sbjct: 260 LFLALAGIASDKERTEEAKRVLEWGLTAFESRQIFAEKEVIGAASVYGGTARTVDLIAKA 319

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +    I N +        +       E  T     
Sbjct: 320 PVSVYIPISNPDRLSARIVYRWPLTAPVEADTQAGTL 356


>gi|319408389|emb|CBI82044.1| penicillin-binding protein [Bartonella schoenbuchensis R1]
          Length = 449

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 2/292 (0%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + +V   + +  +     +  +          ++D +TG  + +        PASLTK+M
Sbjct: 13  KGIVTTFIVLTISYSSAKATPKEAYPDKYAAIVIDAHTGKTLFQANATLKRYPASLTKMM 72

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  ++ ++    TPI IS  A+  PP+   FK G T++++ A K LI KSAND+A
Sbjct: 73  TLYMLFEAMEVRRVTPNTPIPISAYAAARPPTKIGFKAGQTISVEEAAKALITKSANDVA 132

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ E L  +E KF + M   ++ LG++ T F NA G+    +Y+TA+DMA L+  ++  
Sbjct: 133 TAVGEYLGGSEPKFARMMTVKARKLGMTNTRFANASGLPDARNYSTAKDMATLALALRKH 192

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQ    F+      +GK   N N  V T  G DG+KTG+T  SG N+  S     +S++
Sbjct: 193 FPQQYKLFKTTSFSFRGKTINNHNKLVKTIKGVDGIKTGYTQMSGSNLATSMHIEGRSIV 252

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           AV++G      R+    +LL+      + +K   Y++        +     I
Sbjct: 253 AVVMGGKSSTERDIHMTNLLNRYLPRASRKKTNGYLVAAVSYNLPTGAATPI 304


>gi|241668486|ref|ZP_04756064.1| Serine-type D-Ala-D-Ala carboxypeptidase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877020|ref|ZP_05249730.1| D-alanyl-D-alanine carboxypeptidase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254843041|gb|EET21455.1| D-alanyl-D-alanine carboxypeptidase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 444

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 138/369 (37%), Gaps = 60/369 (16%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P +  ++  TG ++++   D    PASLTK+MT+Y+V S +K       T + IS+
Sbjct: 51  ELDAPAWVAMNYRTGDIVSQKNMDVRRPPASLTKIMTSYIVASEIKAGNLSWDTMVPISE 110

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN T+K 
Sbjct: 111 KAASTGGSKMYVKAGAKVSVKNLVTGMDVVSGNDATIALAEYIGGTAEAFTDLMNQTAKA 170

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           +G++ THF N  G+     YTTA DMA+L+     +FP     +  +GL     +     
Sbjct: 171 IGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPDAYKIYDDRGLVWNATQQESVS 230

Query: 200 -----------------------------------------------YPNTNWAVGTFLG 212
                                                            N N  + TF G
Sbjct: 231 IADRKQCLPKFDRSSGNVLESFSAKGLDSQAQDKCSKLFPKGDNFVLQNNRNRLLFTFDG 290

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           ADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  S+ LL        +   
Sbjct: 291 ADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTSSSAKRDSESSKLLRYAISKYENVLL 350

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-------ESHFIDFEK 325
                        +       +++     + I                          +K
Sbjct: 351 YKAN-SPVTISADNIPNAKAGQKITVASTQNIYQTVPKTYIPFLKQGIVFTPGIKAPIKK 409

Query: 326 ITLLKNKIT 334
              +   + 
Sbjct: 410 GQTVGELVI 418


>gi|49475609|ref|YP_033650.1| penicillin-binding protein [Bartonella henselae str. Houston-1]
 gi|49238416|emb|CAF27643.1| Penicillin-binding protein [Bartonella henselae str. Houston-1]
          Length = 387

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 87/355 (24%), Positives = 137/355 (38%), Gaps = 20/355 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR  L I               AE          L+D +T  V+ E   D P+ PASL K
Sbjct: 1   MRTVLRIFFTLFWMLTLDGRGKAEDFQTSAQQLLLVDDDTDTVLFEKQSDIPFFPASLAK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIV 113
           LMTA V+F  LKE     T    +S+NA          +    K  + +++ + L+ LI+
Sbjct: 61  LMTAEVIFHQLKEGLLSNTQTFKVSENAWRKGGAPSGTTTMFAKVKTEISVSDLLRGLII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            + ND A+ +AE +  +E  F + MN  +K LGL  ++F+N  G+ +   + T RDM  L
Sbjct: 121 VNGNDAAITLAEGVSGSEADFAKLMNQRAKALGLEHSYFVNPTGLPEEEQFVTLRDMMTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I   +P Y   ++            N N  +   +G +G   G++   GF++V +A 
Sbjct: 181 TRHIARAYPNYYILYREPHFTWNKIFQRNKNPLISKEIGVEGFGFGYSEEEGFSMVVAAY 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVP 290
           +  + L   I G  +     K    +L  G      +                   N VP
Sbjct: 241 KNHRHLFLAINGLQNGKGHTKEIERILQWGMTAFDLKTIFTKGETVGHASVYGGEQNSVP 300

Query: 291 NI---------SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            I         S E     K  I Y   +K         +   +I   K  + +K
Sbjct: 301 LIVKGPIRFMLSNEKKVDVKAKIKYRGPLKAP-IILGQPVGVIQILQDKKVLLEK 354


>gi|110633724|ref|YP_673932.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mesorhizobium
           sp. BNC1]
 gi|110284708|gb|ABG62767.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Chelativorans
           sp. BNC1]
          Length = 465

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 100/288 (34%), Positives = 154/288 (53%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + ++A+A  + +    + A  N      ++D  TG V+ E+  D    PASLTK+MT Y+
Sbjct: 36  IAVLAVATGAFVLSLAASAAANPKYAGIVIDAKTGQVLYEDSADELRYPASLTKMMTLYL 95

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           VF  +   +   +T IT SKNAS  PP+      G ++T++ A+  LI +SAND A AIA
Sbjct: 96  VFESMAAGRISKSTSITFSKNASAEPPTKLGVPAGKSITVEQAILALITRSANDAATAIA 155

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +E+ F + M   ++ LG+ +T F NAHG+  +   TTARDMA L   ++  +PQY
Sbjct: 156 EKLGGSEESFARMMTAKARQLGMKSTTFRNAHGLPNNAQKTTARDMARLGIALREHYPQY 215

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF  +     GKK    N  +G   GADG+KTG+  ASGFN+V+S   G + ++AV++
Sbjct: 216 YDYFSTRSFVFSGKKINGHNNLLGRVKGADGIKTGYINASGFNLVSSVSTGGRQIVAVVM 275

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           G     +R+    SL+       +  +  + I K    +    + P I
Sbjct: 276 GGKTARSRDAHMVSLIERYLPKASTGRGQDLIAKGPAIRPTITDTPAI 323


>gi|56708118|ref|YP_170014.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           family protein [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670589|ref|YP_667146.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           family protein [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301929|ref|YP_001121898.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|224457209|ref|ZP_03665682.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           tularensis subsp. tularensis MA00-2987]
 gi|254370602|ref|ZP_04986607.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874916|ref|ZP_05247626.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604610|emb|CAG45662.1| D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein)
           family protein [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320922|emb|CAL09045.1| D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein)
           family protein [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049706|gb|ABO46777.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|151568845|gb|EDN34499.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840915|gb|EET19351.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159318|gb|ADA78709.1| D-alanyl-D-alanine carboxypeptidase family protein [Francisella
           tularensis subsp. tularensis NE061598]
          Length = 444

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 147/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKTGQTVGNLVI 418


>gi|167627934|ref|YP_001678434.1| Serine-type D-Ala-D-Ala carboxypeptidase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167597935|gb|ABZ87933.1| Serine-type D-Ala-D-Ala carboxypeptidase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 444

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 138/369 (37%), Gaps = 60/369 (16%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P +  ++  TG ++++   D    PASLTK+MT+Y+V S +K       T + IS+
Sbjct: 51  ELDAPAWVAMNYRTGDIVSQKNMDVRRPPASLTKIMTSYIVASEIKAGNLSWDTMVPISE 110

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN T+K 
Sbjct: 111 KAASTGGSKMYVKAGAKVSVKNLVTGMDVVSGNDATIALAEYIGGTAEAFTDLMNQTAKA 170

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           +G++ THF N  G+     YTTA DMA+L+     +FP     +  +GL     +     
Sbjct: 171 IGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPDAYKIYDDRGLVWNATQQESVS 230

Query: 200 -----------------------------------------------YPNTNWAVGTFLG 212
                                                            N N  + TF G
Sbjct: 231 IADRKQCLPKFDRSSGNVLESFSAKGLDSQAQDKCAKLFPKGDNFVLQNNRNRLLFTFDG 290

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           ADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  S+ LL        +   
Sbjct: 291 ADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTSSSAKRDSESSKLLRYAISKYENVLL 350

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-------ESHFIDFEK 325
                        +       +++     + I                          +K
Sbjct: 351 YKAN-SPVTISADNIPNAKAGQKITVASTQNIYQTVPKTYIPFLKQGIVFTPGIKAPIKK 409

Query: 326 ITLLKNKIT 334
              +   + 
Sbjct: 410 GQTVGELVI 418


>gi|42523517|ref|NP_968897.1| hypothetical protein Bd2044 [Bdellovibrio bacteriovorus HD100]
 gi|39575723|emb|CAE79890.1| dacA [Bdellovibrio bacteriovorus HD100]
          Length = 286

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 87/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            + K   + LLD ++G ++AE   D    PASLTK+MTAY+VFS ++E +      + +S
Sbjct: 28  PSVKALSWVLLDASSGQILAELNKDQRLPPASLTKVMTAYMVFSEIREGRLSRMDRVKVS 87

Query: 84  KNASEYPPS--NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           + A    P   +   + G  +T++  L+ LIV SAND A+ +AE +  ++K F + MN T
Sbjct: 88  EQAIIRRPEESSMYLRVGEFVTVEELLRGLIVASANDAALVLAEVVSGSQKAFTEQMNKT 147

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ LG++ + F N+ G+    HY+TA+D+ +L+ RI  +FP+Y  Y   K L  +     
Sbjct: 148 AQKLGMTQSLFANSSGLYTEKHYSTAKDLGLLAVRISQEFPEYFEYSSSKELTFRDFHKK 207

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ------SLIAVILGALDRNTRNKV 255
           NTN  + + L  DGMKTG   A+G+ ++ SA +  +        IAV+LGA     R   
Sbjct: 208 NTNDLLFSKLPVDGMKTGHIKAAGWCVMVSARKNKRPDKKSERYIAVVLGAPSNQDRFVA 267

Query: 256 SASLLSMGFYNKTDRK 271
             +LL   F   +  K
Sbjct: 268 GRALLEFAFSQPSTFK 283


>gi|229087877|ref|ZP_04219989.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
 gi|228695432|gb|EEL48305.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
          Length = 426

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 144/374 (38%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR+ L I+   +LS     ++ +        +     L D +TG ++ E  PD     AS
Sbjct: 3   MRKILSILLAFLLSFSSLGVTTSHAEEKIHIEAAAAILFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              +K L    
Sbjct: 63  MSKLIVVYSVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVKELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 VIFSANGSSIALAELLAGSEKNFLNLANEYAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  I T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNGENSLSARDMGILSKIIITKYPEMLADTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 243 AYEGTDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMDERFTESRELIDYGFNNFE 302

Query: 269 DRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE---SHFI 321
            +K    K N I     +++     P     V T +    +Y    +  K          
Sbjct: 303 KQKLKIDKNNTISVVKGKEDTVTVTPEKEITVITQKGSKPSYKISTEADKSLAEDGKLVA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + + + +
Sbjct: 363 PIKKDAKVGSFVLE 376


>gi|229542251|ref|ZP_04431311.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           coagulans 36D1]
 gi|229326671|gb|EEN92346.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           coagulans 36D1]
          Length = 468

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 79/370 (21%), Positives = 139/370 (37%), Gaps = 41/370 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           FL ++  A +    P    A+           ++D + G ++ E   +     AS++K+M
Sbjct: 41  FLALLLTAGVVQQVPKTVHAQDQLDIHAKAAIIVDADNGQILYEKNANQALGIASMSKMM 100

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSA 116
           T Y++   + EKK      +TIS  A     +    N   +KG   T+    + + + SA
Sbjct: 101 TEYLLLKAIHEKKVSWNQKVTISDYAYRISQNRALSNVPLRKGEKYTVKELFQAMAIYSA 160

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-------------- 162
           N   +AIAE+L  TEK ++  MN  +K  GL+   F+NA G+                  
Sbjct: 161 NGATIAIAETLGGTEKNYLNMMNKQAKAFGLTDYKFVNATGLNNEDLQGMQPEGTGRTEE 220

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGA 213
           +  +A+ +A +++ +  D+P+ +       ++ +          N NW     V    G 
Sbjct: 221 NLVSAKSVAKIAYHLIHDYPEILQTTSTAKMKFRAGTDDEIAMQNWNWMLPSLVYGRQGV 280

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN------TRNKVSASLLSMGFYNK 267
           DG+KTG T  +G+    +A Q    +I V+L A D N      +R  V+  L+   F N 
Sbjct: 281 DGLKTGNTDNAGYCFTGTAKQNGMRIITVVLHAEDANGNSTIKSRFDVTNKLMDYAFSNF 340

Query: 268 TDRKKINYI-----IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           T++                              +    K             D +     
Sbjct: 341 TEKTLYPKGYQVKKTVTVKSGKEKQASVVTKAPLKVAVKNGEGKMYTPVVKFDSKQIKAP 400

Query: 323 FEKITLLKNK 332
            +K T +   
Sbjct: 401 VKKGTKVGTL 410


>gi|240850298|ref|YP_002971691.1| penicillin-binding protein [Bartonella grahamii as4aup]
 gi|240267421|gb|ACS51009.1| penicillin-binding protein [Bartonella grahamii as4aup]
          Length = 449

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 92/308 (29%), Positives = 152/308 (49%), Gaps = 4/308 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +  + +A                     ++D  TG  + +        PASLTK+MT Y+
Sbjct: 17  ISFVVLAFSYCWASATPQGAYPDKYAAIVIDATTGKTLFQANATLKRYPASLTKMMTLYL 76

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  ++ ++    TPI +S  A+  PP+   FK G T++ ++A K LI +SAND+A AIA
Sbjct: 77  LFEAMQMRRVTPNTPIPVSHYAAMRPPTKIGFKAGQTISAESAAKALITRSANDVAAAIA 136

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +EKKF Q M   ++ LG+  THF NA G+    +Y+TARD+A LS  ++  FP+ 
Sbjct: 137 EYLGGSEKKFAQMMTIKARKLGMKHTHFANASGLPDVHNYSTARDIATLSLALRKHFPKQ 196

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              F+ K    +G K  + N  V    G DG+KTG+T  SG N+  S     +S++AV++
Sbjct: 197 YKLFKTKSFNFRGHKINSHNKLVKIMKGVDGIKTGYTQMSGSNLATSMRLDGRSVVAVVM 256

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G      R++  ASLL+      +  K    ++         +     +  + T + +  
Sbjct: 257 GGKSSTARDEHMASLLNQYLPKASQMKSGERLMASV----RYHLPTGANTPIPTIKADSS 312

Query: 305 NYNTQMKE 312
           N++ ++  
Sbjct: 313 NFDDEIST 320


>gi|170747224|ref|YP_001753484.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653746|gb|ACB22801.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 489

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 90/305 (29%), Positives = 162/305 (53%), Gaps = 8/305 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  +G  +     D   +PAS+TK+MT Y++F  ++  K  L + +TIS +A+  
Sbjct: 53  AAMVVDVKSGKTLHAVNEDALRHPASITKVMTLYLLFEQMERGKFALDSDLTISAHAAAQ 112

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            PS    + G T+++++A+K ++ KSAND+A AI E++  +E++F Q M   +  LG+S 
Sbjct: 113 APSKLGLRPGQTISVEDAIKAIVTKSANDVACAIGENIAGSEERFAQMMTAKAHALGMSR 172

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           TH+ NA G+      TTARD+ +L+  I+  FP Y  YFQ +    +G+   N N  +G 
Sbjct: 173 THYANASGLPDPEQLTTARDLTVLARAIQDRFPHYYRYFQTRSFAFRGRVIGNHNHLLGN 232

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+T  SGFN++ +A    + ++A++LG      R+++ A L+         
Sbjct: 233 VQGVDGIKTGYTRDSGFNLMTAAKSEGRQIVAIVLGGKSGAGRDRIMADLVRSSLPRAYA 292

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +I+  + +  ++     V +    V  T+ ++ + +      +D E+     E + L 
Sbjct: 293 GARISAPVTEVAERARPAVVADA---VSRTRTQVASADD-----EDVETTGTTGEPLDLS 344

Query: 330 KNKIT 334
            +K T
Sbjct: 345 PSKTT 349


>gi|220931566|ref|YP_002508474.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halothermothrix orenii H
           168]
 gi|219992876|gb|ACL69479.1| Serine-type D-Ala-D-Ala carboxypeptidase [Halothermothrix orenii H
           168]
          Length = 377

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 20/307 (6%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG V+  +  +H   PAS TK++T  +     +     L   +T+S+ A+    S+   +
Sbjct: 45  TGQVLYNHRMNHKLPPASTTKILTTIIAIEEGE-----LNEMVTVSRRAAYQEGSSIWLQ 99

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           +G  + L++ L  +++ S ND AVA+AE +  + KKF + MN  +K +G + ++F+N  G
Sbjct: 100 EGEKLPLEDLLYGVMLASGNDAAVAVAEHISGSVKKFSELMNKRAKEIGATNSNFLNPSG 159

Query: 158 VVQHGHYTTARDMAILSWRIKTDF------PQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           + Q GHY+TA D+A++      +                 G E       N N  +  + 
Sbjct: 160 LPQSGHYSTAHDLAMIMRYALKNDIFARITSTKYKTISWPGKEWDRG-LRNHNKLLWKYP 218

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
              G KTG+T A+G  +VASA + ++ ++AV+L   +          LL  G  N    +
Sbjct: 219 DITGGKTGYTRAAGRCLVASAKRDNRHVVAVVLNCPND---WVEIRKLLDYGLNNFKKIR 275

Query: 272 KINYIIKDFYQQNLSNEVPNIS----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
            I         +   +          E++     E  +   + +   +     +   K  
Sbjct: 276 YIKKGQVLRTLEWTRSREKTFKLVTGEDLDIVVPEGGSIKIKKEIVLN-PDITLPINKGD 334

Query: 328 LLKNKIT 334
           ++   I 
Sbjct: 335 VVGELIL 341


>gi|187931647|ref|YP_001891631.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712556|gb|ACD30853.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 444

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 147/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKIGQTVGNLVI 418


>gi|125973746|ref|YP_001037656.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|256005750|ref|ZP_05430704.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum DSM 2360]
 gi|281417903|ref|ZP_06248923.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum JW20]
 gi|125713971|gb|ABN52463.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium thermocellum
           ATCC 27405]
 gi|255990284|gb|EEU00412.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum DSM 2360]
 gi|281409305|gb|EFB39563.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum JW20]
 gi|316940059|gb|ADU74093.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           thermocellum DSM 1313]
          Length = 432

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 143/350 (40%), Gaps = 28/350 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            SNI    +         Y L+D+ TG V+AE+ PD    PAS TK+MTA +        
Sbjct: 15  FSNIVTLKAQPLDINAQAYILIDSKTGQVLAEHNPDLRTYPASTTKIMTAILALELGDLN 74

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           + M  +   I  +       +     G  + L   L  L+V+SAN+ A  IAE+LC + +
Sbjct: 75  QIMTVSQSAI--DDIGPGGMHIGLLPGEQLELRYLLDALLVRSANETAYVIAENLCSSRE 132

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQ----HGHYTTARDMAILSW--RIKTDFPQYMH 186
           +F + MN  ++ LG + T+F+N  G+        H TTARD+A ++       +F + + 
Sbjct: 133 EFYRLMNEKARELGATNTNFVNPCGIDNGEKGKNHLTTARDLAKIAQYAMTIPEFREIVQ 192

Query: 187 YFQIKGLEIKGKK-------------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              IK                     Y N+ +    +    G+KTG+T  +  N+V+SA+
Sbjct: 193 KTIIKIPPTNKHAEEVIVGTTNKLLLYSNSKYKSEHYTKITGIKTGYTDRALNNLVSSAV 252

Query: 234 QG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
                 LIAV+LG  + +   + S  LL  GF N + +  I           L     + 
Sbjct: 253 NDEGTELIAVVLGVENYDMVFEYSKMLLEYGFKNYSVQPVIAPNSYITSVPVLKAAGNHN 312

Query: 293 SEEVCTTQ------KEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            + + + +            N    E    E+     +K  +L     KK
Sbjct: 313 LDILASPEGLKCLLPNNSTKNDYEIEQHILENIEAPVKKGDVLGYIEVKK 362


>gi|114704618|ref|ZP_01437526.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family protein
           [Fulvimarina pelagi HTCC2506]
 gi|114539403|gb|EAU42523.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family protein
           [Fulvimarina pelagi HTCC2506]
          Length = 396

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 74/346 (21%), Positives = 141/346 (40%), Gaps = 17/346 (4%)

Query: 2   RQFLVIIAMAMLSN-------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R  L   A+  L++            +     + P   L++  TG VI +     P+ PA
Sbjct: 5   RPLLAAFAILSLTSHVTQAQEGAAANAYGLQTEAPRALLVEDRTGTVILDKNASEPFAPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALK 109
           SL KLMT  +VF  LK  +  ++T   ++++A     +            S + + + ++
Sbjct: 65  SLAKLMTMEIVFEALKAGEISMSTEYAVTEHAWRTGGAPSGAATMFAAINSRIPVADLIR 124

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--HYTTA 167
             I++ AND A+ +AE +  +E++F + MN  ++ LGL  T + N  G+        TTA
Sbjct: 125 GTIIQGANDGAIILAEGMFGSEEEFTERMNARAEELGLDDTRYANPTGLPTEEGEQQTTA 184

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           RD+  L+  ++++ P+    +     E       N N  +   LG +G+ TG+T ASG++
Sbjct: 185 RDLVTLTRHLRSEHPELYKIYAEPAFEWNKIFQRNRNPVLREELGGEGVGTGYTEASGYS 244

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQN 284
           ++ +A +G ++ +  + G      R   +  LL  GF    +   +    K         
Sbjct: 245 LMGAASKGGRTFLVALSGLESSAAREAEAQRLLEFGFDRLIEADVLEAGAKLGEVPVFNG 304

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           +   VP   ++                  + +       E    + 
Sbjct: 305 VVETVPVRIDQPIAILLPEEALEEVSARLRFEGPVIAPVEPGDRIG 350


>gi|15615440|ref|NP_243743.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus halodurans C-125]
 gi|10175498|dbj|BAB06596.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus halodurans C-125]
          Length = 395

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 26/293 (8%)

Query: 1   MR---QFLVIIAMAMLSNIFPFLSIAET--------------NKLPYYTLLDTNTGHVIA 43
           MR   +  +++ +  +S  F   + A                       L+D  +G V+ 
Sbjct: 1   MRHLFRVFILLFLFFVSLQFSVQTNASAFVSEGETLNDAHFHLNSESVLLMDQLSGQVLY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
             + D    PAS+TK++TA +           L   +T+SK A+E   +     +G  +T
Sbjct: 61  SEHGDKKMYPASITKIITALIAIEEGD-----LDDIVTVSKTATEVIGTRVYLVEGEEVT 115

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK-NLGLSATHFMNAHGVVQHG 162
           L   ++ L++ S ND   AIAE     E+ F + MN   +  +G+  THF N HG+    
Sbjct: 116 LRKLVQGLMINSGNDAGTAIAEHFDGNEEAFAERMNRFVQVKIGVENTHFTNPHGLFDKE 175

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG---KKYPNTNWAVGTFLGADGMKTG 219
           HYTTA DMA+++     +          +   I         N +  +  + G  G+K G
Sbjct: 176 HYTTAYDMAMITKYAMENEKFRDVASTKELEWIGEGWETTIYNHHRLLWDYPGTTGVKNG 235

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           +   SG+ +V +A + DQ LIAV L A   +     + +LL  GF +    K 
Sbjct: 236 YVSQSGYTLVTTAERDDQQLIAVTLNAPGASFSYNDTMTLLDYGFEHFKTEKI 288


>gi|253682095|ref|ZP_04862892.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum D
           str. 1873]
 gi|253561807|gb|EES91259.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum D
           str. 1873]
          Length = 412

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 86/329 (26%), Positives = 143/329 (43%), Gaps = 22/329 (6%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
              T       L+D NTG ++     D  + PAS TK+MTA +           L   +T
Sbjct: 27  TPPTASADGVVLMDKNTGQILYSKNLDTQYPPASTTKIMTALLTLENS-----NLNDVVT 81

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           + KNA     S     +G  +T+ + L  L+++SAND A+A++E +  + K+FV  MN  
Sbjct: 82  VGKNAVNVDGSKVYLFEGEKLTIKDLLHALLLQSANDSAIALSEHVSGSTKEFVNLMNKR 141

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP------QYMHYFQIKGLEI 195
           +K LG   T+F+N HG+    H TTARD+ ++   +             M+Y      E 
Sbjct: 142 AKELGCKHTNFVNPHGLYDDKHRTTARDLGLILRELSKHDEFKEIATTSMYYINPTNKEA 201

Query: 196 KGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K +   N +      +   + G +G KTG+T  S  + VA+A + ++SLIA++L    ++
Sbjct: 202 KKRPIWNKDKLVQKKSKYYYEGCEGGKTGYTIQSKHSFVATATRNNKSLIAILLH-DQKH 260

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIK--DFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
           T       L   GF N T            ++            +E+ C  +++    +T
Sbjct: 261 TYWNDVIKLFDYGFNNYTLETLYTKGQILCNYKVTKNFKVPILGNEDFCYLRRKDAK-DT 319

Query: 309 QMKEAKDKESHFIDFEKITLL--KNKITK 335
              +  DK      F K  ++   N I +
Sbjct: 320 PKLKIDDKSLISKSFSKGDIILTGNIIYQ 348


>gi|149181680|ref|ZP_01860173.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Bacillus sp. SG-1]
 gi|148850658|gb|EDL64815.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Bacillus sp. SG-1]
          Length = 384

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 23/349 (6%)

Query: 1   MRQ-------FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++       + V I   + S++      A +       ++D +TG V+ E     P   
Sbjct: 1   MKKRRIRAYIYTVFIFSVIFSSLSGTAEAAPSVSAQRAIVIDQDTGRVLYEKDAHTPSRI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MTA +     K     L   + +S NA +   S+   K G  + L++ +  L++
Sbjct: 61  ASITKIMTAILAIESGK-----LEETVKVSNNAVKAEGSSIYLKPGEKIKLEDLVYGLML 115

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           +S ND AVAIAE +  +   F+  MN  ++ +G+  THF N HG+  H  + +      L
Sbjct: 116 RSGNDSAVAIAEHVGGSLDGFIFLMNKKAEEIGMRNTHFANPHGLDDHEDHYSTAFDMAL 175

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGK------KYPNTNWAVGT-FLGADGMKTGFTCASGF 226
             +      +Y      K             K+ N N  +   +    G KTG+T  +  
Sbjct: 176 LTKYAMQNEKYKEVAGTKVHTSPDPEHDWDRKWKNKNRLLTELYKYCTGGKTGYTKRAKR 235

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
            +V +A +G+Q+LIAV L   D          +   GF N      +        +    
Sbjct: 236 TLVTTATKGEQNLIAVTLNGPDD---WNDHIQMFEFGFKNFDTVIAVPEGNVKKIEDEFY 292

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI-DFEKITLLKNKIT 334
                I  +V  T  +    + +++    K      D     ++   + 
Sbjct: 293 KNKVYIKRDVLLTLTKEEEESVRVEYKLMKPEDSWRDGAVPDVVGKAVI 341


>gi|38142291|dbj|BAD00948.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|38142297|dbj|BAD00951.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|301799864|emb|CBW32439.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pneumoniae OXC141]
          Length = 413

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 74/367 (20%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  L+     L+TP+ IS    +      +++   +    T++  L+  +V SA
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  +EK FV  M       G+     +N  G+                  
Sbjct: 121 NSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG+KT
Sbjct: 181 NKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK + 
Sbjct: 241 GTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQ 300

Query: 275 YII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    E++   ++     +  ++   D ++     E  T+
Sbjct: 301 QGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIEQIGNQSSQSVQFTPDSKAIPAPLEARTV 360

Query: 329 LKNKITK 335
           + +   +
Sbjct: 361 VGHLTYE 367


>gi|157828411|ref|YP_001494653.1| penicillin-binding protein dacF precursor [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|157800892|gb|ABV76145.1| penicillin-binding protein dacF precursor [Rickettsia rickettsii
           str. 'Sheila Smith']
          Length = 306

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 89/286 (31%), Positives = 139/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFVVTFFFAPISEAKKAVRNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  A++ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKAAKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARD+A L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDIAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  ++         N S  
Sbjct: 250 VTGGKSAESRDQKMMGLLD---QHFNIKPIVSKPAIKLASNNKSTT 292


>gi|182678644|ref|YP_001832790.1| Serine-type D-Ala-D-Ala carboxypeptidase [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182634527|gb|ACB95301.1| Serine-type D-Ala-D-Ala carboxypeptidase [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 563

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 3/301 (0%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           ET       ++D N+GH +  +      +PAS+TK+MT Y++F  L++    L + I +S
Sbjct: 71  ETPASVAAIVVDANSGHTLYAHGEHELRHPASITKVMTLYLLFEQLEQGHLRLDSAIHVS 130

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +A+   P+      GS++++++A++ ++ +SAND+AVAIAE++   E+ F   M   + 
Sbjct: 131 PHAAAQKPTKLGLHAGSSISVEDAIRAVVTRSANDMAVAIAETVGGDEETFAGMMTRKAH 190

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            LG+S THF NA G+      TTA D+AIL   I+  FP+Y  YF        G++  N 
Sbjct: 191 MLGMSRTHFENASGLPNDAQVTTAHDLAILGRAIQDRFPRYYPYFSTHVFHYAGQEIRNH 250

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +    G DG+KTG+T ASGFN++ S  +G  S++A +LG +    R+++ A L+   
Sbjct: 251 NHLLDQVEGMDGIKTGYTRASGFNLLTSVKRGGHSIVAAVLGGVSAGARDRIMARLIENQ 310

Query: 264 FYNKTDRK---KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             N    +    +              E+P     +        +     K A   +   
Sbjct: 311 IDNGATTRSVGLLTENTASDRLARSGEELPPELRRISMPMPPRTSLLGDAKAANAGKPDA 370

Query: 321 I 321
            
Sbjct: 371 A 371


>gi|116252224|ref|YP_768062.1| penicillin-binding protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256872|emb|CAK07966.1| putative penicillin-binding protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 397

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 136/340 (40%), Gaps = 8/340 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R    ++  A  +      +     K+    +++  TG V+     D  ++PASL KLM
Sbjct: 6   LRLLACLMPFATGAFAADGGAAGFATKVAQAYMIEATTGTVLLAKNEDQGFSPASLAKLM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTLDNALKLLIVKS 115
           T  +VF  L + +  L T   +S+ A     +            S + +++ +K + ++ 
Sbjct: 66  TMDLVFEALTKGQITLDTEYPVSEYAWRTGGAPSRAATMFASLKSRVRVEDLIKGVAIQG 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND  + +AE +  +E++F   M   ++ LG+    F N+ G+       TAR+M  L+ 
Sbjct: 126 ANDSCIILAEGMAGSEQQFAVSMTRRARELGMEKAEFGNSTGLPDGKSKVTAREMVTLAA 185

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            ++  +P    YF     E       N N  +G  +GADG+ TGFT   G++IVAS  + 
Sbjct: 186 ALQQTYPNLYPYFAQPDFEWNKIFQRNRNPLLGLDIGADGLATGFTEGEGYSIVASVERD 245

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNI 292
            + L   + G      R + +  +L  G     +R+       I         +  V  +
Sbjct: 246 GRRLFVALAGIASDKERTEEAKRVLEWGLTAFENRQIFGEKEVIGAASVYGGTARTVDLV 305

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++   +    I N +        +       +  T     
Sbjct: 306 AKAPVSVYIPISNPDRLSARIIYRWPLAAPVKPDTQAGTL 345


>gi|57339684|gb|AAW49829.1| hypothetical protein FTT1029 [synthetic construct]
          Length = 479

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 147/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 73  PANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 132

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 133 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 192

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 193 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 252

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 253 DSVSIADRKQCLPKFDRATGNVIESYTVKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 312

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 313 TFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 372

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 373 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 432

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 433 IKTGQTVGNLVI 444


>gi|62289988|ref|YP_221781.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82699916|ref|YP_414490.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis biovar
           Abortus 2308]
 gi|225627545|ref|ZP_03785582.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti str. Cudo]
 gi|237815492|ref|ZP_04594490.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|254689296|ref|ZP_05152550.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 6 str.
           870]
 gi|254697432|ref|ZP_05159260.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254701819|ref|ZP_05163647.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis bv. 5 str. 513]
 gi|254706741|ref|ZP_05168569.1| D-alanyl-D-alanine carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|254710152|ref|ZP_05171963.1| D-alanyl-D-alanine carboxypeptidase [Brucella pinnipedialis B2/94]
 gi|254714151|ref|ZP_05175962.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti M644/93/1]
 gi|254716791|ref|ZP_05178602.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti M13/05/1]
 gi|254730330|ref|ZP_05188908.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 4 str.
           292]
 gi|256031647|ref|ZP_05445261.1| D-alanyl-D-alanine carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|256159791|ref|ZP_05457534.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti M490/95/1]
 gi|256255049|ref|ZP_05460585.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti B1/94]
 gi|256257546|ref|ZP_05463082.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 9 str.
           C68]
 gi|256369499|ref|YP_003107007.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|260168777|ref|ZP_05755588.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. F5/99]
 gi|260545262|ref|ZP_05821003.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260754808|ref|ZP_05867156.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260758030|ref|ZP_05870378.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260761853|ref|ZP_05874196.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260883826|ref|ZP_05895440.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|261218589|ref|ZP_05932870.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261222240|ref|ZP_05936521.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|261314205|ref|ZP_05953402.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261317706|ref|ZP_05956903.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|261321914|ref|ZP_05961111.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|261752376|ref|ZP_05996085.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|261758258|ref|ZP_06001967.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella sp. F5/99]
 gi|265988739|ref|ZP_06101296.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|265998204|ref|ZP_06110761.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
 gi|297248388|ref|ZP_06932106.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 5 str.
           B3196]
 gi|62196120|gb|AAX74420.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82616017|emb|CAJ11050.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella
           melitensis biovar Abortus 2308]
 gi|225617550|gb|EEH14595.1| D-alanyl-D-alanine carboxypeptidase [Brucella ceti str. Cudo]
 gi|237790329|gb|EEP64539.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus str. 2308 A]
 gi|255999659|gb|ACU48058.1| D-alanyl-D-alanine carboxypeptidase [Brucella microti CCM 4915]
 gi|260096669|gb|EEW80544.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus NCTC 8038]
 gi|260668348|gb|EEX55288.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 4
           str. 292]
 gi|260672285|gb|EEX59106.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260674916|gb|EEX61737.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 6
           str. 870]
 gi|260873354|gb|EEX80423.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella abortus bv. 9
           str. C68]
 gi|260920824|gb|EEX87477.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|260923678|gb|EEX90246.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M13/05/1]
 gi|261294604|gb|EEX98100.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M644/93/1]
 gi|261296929|gb|EEY00426.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           B2/94]
 gi|261303231|gb|EEY06728.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261738242|gb|EEY26238.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella sp. F5/99]
 gi|261742129|gb|EEY30055.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 5 str.
           513]
 gi|262552672|gb|EEZ08662.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
 gi|264660936|gb|EEZ31197.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M292/94/1]
 gi|297175557|gb|EFH34904.1| D-alanyl-D-alanine carboxypeptidase [Brucella abortus bv. 5 str.
           B3196]
          Length = 410

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   +   P++  ++ 
Sbjct: 264 SAGQRDGQMAKLLTR-FGGVDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 312


>gi|189024230|ref|YP_001934998.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
 gi|189019802|gb|ACD72524.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella abortus
           S19]
          Length = 397

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 11  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 70

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 71  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 130

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 131 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 190

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 191 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 250

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   +   P++  ++ 
Sbjct: 251 SAGQRDGQMAKLLTR-FGGVDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 299


>gi|229586661|ref|YP_002845162.1| Penicillin-binding protein dacF precursor [Rickettsia africae
           ESF-5]
 gi|228021711|gb|ACP53419.1| Penicillin-binding protein dacF precursor [Rickettsia africae
           ESF-5]
          Length = 306

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 92/286 (32%), Positives = 139/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFVVTFFFAPISEAKKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +      F   N S  
Sbjct: 250 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKPSIKFASNNKSTT 292


>gi|152977572|ref|YP_001377089.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152026324|gb|ABS24094.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 425

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 79/344 (22%), Positives = 132/344 (38%), Gaps = 34/344 (9%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     L D +TG V+ E  PD     AS++KLM  Y V   +K  K    T + IS  
Sbjct: 31  IEAAAAILFDADTGKVLHEQNPDELLAVASMSKLMVVYAVLEAIKAGKITWNTKVNISDY 90

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNT 141
           A E   +N              ++ L        A   + +L +    +EK F++  +  
Sbjct: 91  AYEVSRNNEFSNVPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLKLADEY 150

Query: 142 SKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           +K LGL    F+NA G+                  +  +ARDM IL+  + T +P+ +  
Sbjct: 151 AKKLGLKKYKFVNATGLNNADLKGKHPEGTDPNGENSLSARDMGILAKTLITKYPEMLED 210

Query: 188 FQIKGLEI-----KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            + +         K  +  N NW        + G DG+KTG +  +G+    +A +GD  
Sbjct: 211 TKQRFRNFPDNHPKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDLR 270

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI----NYIIKDFYQQNLSNEVPNISE 294
           LI+VI+     + R   S  L+  GF N   +K      N I     +++  +  P    
Sbjct: 271 LISVIIKTKSMDERFTESRELIDYGFRNFEKKKLTLDKNNTISVVKGKEDAVSIAPEKEI 330

Query: 295 EVCTTQKEIINYNTQMKEAKDKE---SHFIDFEKITLLKNKITK 335
           EV T +     Y T  +               +K   + + + +
Sbjct: 331 EVVTKKGSKPPYKTSTEAIPSLAEEGKLIAPIKKDAKVGSIVLE 374


>gi|15614136|ref|NP_242439.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Bacillus halodurans C-125]
 gi|10174190|dbj|BAB05292.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein)
           [Bacillus halodurans C-125]
          Length = 382

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 20/312 (6%)

Query: 1   MRQF-LVIIAMAMLSNI------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR+F L+ I++ +  ++          +   +       L++ +TG V+ E         
Sbjct: 1   MRRFWLIAISLFVTLSVGIPERVSAETTEPASVSAQAAILMEQSTGRVLYEKDAHTSLRI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MTA +     +     +   + +S NA     S+   + G  + L + +  L++
Sbjct: 61  ASITKIMTALLAIESGR-----MDEWVKVSSNAEGTEGSSLYLRAGEKIKLSDLVYGLML 115

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAI 172
           +S ND AVAIAE +  +   FV  MN  ++ LG+S T F N HG+  H  HY++A DMA+
Sbjct: 116 RSGNDAAVAIAEHVGGSMDGFVYMMNQKAEELGMSNTVFQNPHGLDDHEDHYSSAYDMAL 175

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKK---YPNTNWAVGT-FLGADGMKTGFTCASGFNI 228
           L+     +                G++   + N N  +   +  + G KTG+T  +   +
Sbjct: 176 LTRYAMNNETYQEISGTKTHRVDNGEQIRVWKNKNRLLTQLYKYSTGGKTGYTKRAKRTL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           V++A + D  LI V L A           +L +  F+     + +        +      
Sbjct: 236 VSTASKDDLDLIVVTLNAPSD---WHDHMNLFNWAFHTFGMTELLEEGKVKGLKDEFYAG 292

Query: 289 VPNISEEVCTTQ 300
               S +V    
Sbjct: 293 QVYASHDVVYPL 304


>gi|306843944|ref|ZP_07476539.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO1]
 gi|306275699|gb|EFM57423.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO1]
          Length = 397

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 11  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 70

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 71  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 130

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 131 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 190

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 191 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNKHLVGVVLGAG 250

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   + + P++  ++ 
Sbjct: 251 SAGQRDGQMAKLLTR-FGGADNGKAAPLVAMAKPQAVTAKQKPDVVADLI 299


>gi|326405324|ref|YP_004285406.1| putative peptidase S11 [Acidiphilium multivorum AIU301]
 gi|325052186|dbj|BAJ82524.1| putative peptidase S11 [Acidiphilium multivorum AIU301]
          Length = 453

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 1/254 (0%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L  I    +         + ++D  TG +++E+   +   PASLTKLMT  + F  L   
Sbjct: 54  LGGIASPAASGPLAPGIDWIVMDAATGRILSEHNAYNERFPASLTKLMTLDLAFHALSHG 113

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTE 131
           +    TP+ +S  A+   P       G T+T+  A+  +   SAND A A+ +     + 
Sbjct: 114 RLNANTPLPVSPAAASVQPVKLNLVAGQTVTVMQAMLGMTTLSANDAATALGQYLGGGSI 173

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           ++    M   +  LG+  + F N  G+      T A DMAIL+  +  D+PQY + F + 
Sbjct: 174 RRVAAEMTARAHALGMERSEFRNPSGLPNPNQVTDAYDMAILARHLLLDYPQYRYLFSVP 233

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +G+  PN +  +  + GA GMKTG+T  + FN+V +A++    LI V + A     
Sbjct: 234 SFRFEGRTIPNIDGMLKRYNGAIGMKTGYTDLARFNLVTAAVRNGHMLIGVEMHAPSWIV 293

Query: 252 RNKVSASLLSMGFY 265
                  LL  GF 
Sbjct: 294 AYNRMTQLLDAGFA 307


>gi|148261820|ref|YP_001235947.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidiphilium cryptum
           JF-5]
 gi|146403501|gb|ABQ32028.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidiphilium cryptum
           JF-5]
          Length = 453

 Score =  162 bits (409), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 1/254 (0%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L  I    +         + ++D  TG +++E+   +   PASLTKLMT  + F  L   
Sbjct: 54  LGGIASPAASGPLAPGIDWIVMDAATGRILSEHNAYNERFPASLTKLMTLDLAFHALSHG 113

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTE 131
           +    TP+ +S  A+   P       G T+T+  A+  +   SAND A A+ +     + 
Sbjct: 114 RLNANTPLPVSPAAASVQPVKLNLVAGQTVTVMQAMLGMTTLSANDAATALGQYLGGGSI 173

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           ++    M   +  LG+  + F N  G+      T A DMAIL+  +  D+PQY + F + 
Sbjct: 174 RRVAAEMTARAHALGMERSEFRNPSGLPNPNQVTDAYDMAILARHLLLDYPQYRYLFSVP 233

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +G+  PN +  +  + GA GMKTG+T  + FN+V +A++    LI V + A     
Sbjct: 234 SFRFEGRTIPNIDGMLKRYNGAIGMKTGYTDLARFNLVTAAVRNGHMLIGVEMHAPSWIV 293

Query: 252 RNKVSASLLSMGFY 265
                  LL  GF 
Sbjct: 294 AYNRMTQLLDAGFA 307


>gi|188584526|ref|YP_001927971.1| serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium populi
           BJ001]
 gi|179348024|gb|ACB83436.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium populi
           BJ001]
          Length = 494

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 12/336 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPWNPA 54
           ++++A + L  +                          ++D  +G  +     D   +PA
Sbjct: 17  VLLLATSFLVAVADPAEAKRRGHARKAVSGYNPPYAAMVVDVKSGRTLHAVNEDALRHPA 76

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT Y++F  L++ +  L +P++IS NA+   PS    + GST+T++ A+K L+ K
Sbjct: 77  SITKVMTLYMLFEQLEKGRYDLDSPLSISANAAAQAPSKLGLRPGSTVTVEEAIKALVTK 136

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A AI E++  +E +F + M   +K LG+S TH+ NA G+      TTA D+ IL+
Sbjct: 137 SANDVACAIGENIAGSEPRFAEMMTRKAKALGMSRTHYANASGLPDPDQITTAHDLTILA 196

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ +A  
Sbjct: 197 RAIQDRFPRYYRYFQTRSFAFRGRTIGNHNRLLGNVEGVDGIKTGYTRDSGFNLMTAAKL 256

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ ++A++LG     +R+++ A L+           +    + +  ++     V     
Sbjct: 257 GDRQIVAIVLGGKSGASRDRIMADLVRANLPRAYAGARQTAPVVEVAERGRPAVVAEADS 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              T        +  ++      +  +D    T   
Sbjct: 317 RTRTVLASAD--DDTVETTNSTSTAPLDIRPATTTP 350


>gi|225378650|ref|ZP_03755871.1| hypothetical protein ROSEINA2194_04319 [Roseburia inulinivorans DSM
           16841]
 gi|225209487|gb|EEG91841.1| hypothetical protein ROSEINA2194_04319 [Roseburia inulinivorans DSM
           16841]
          Length = 461

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 78/362 (21%), Positives = 131/362 (36%), Gaps = 37/362 (10%)

Query: 4   FLVIIAMAML----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            L II+   L         +   A     P   L++ +TG ++ E   D    PAS+TK+
Sbjct: 14  ILTIISAVCLGKVDVKAADYWPDAPETLSPGVILMEESTGTILYEKNSDEAHYPASITKI 73

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           MT  +           L+  +T S +  +    S      G  MTL+  L  ++++SAN+
Sbjct: 74  MTTLLALEN-----GNLSDMVTFSDDAINNTEGSGIARDYGEQMTLEQCLYGVMLESANE 128

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A A+AE +  T + FV  MN  +K LG + THF N HG+    HYTTA DMA+++    
Sbjct: 129 CAYAVAEHVGGTVENFVDMMNAKAKELGCTNTHFANPHGLQDENHYTTAHDMALIAQAAY 188

Query: 179 TD----------------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
            +                  ++     ++        Y N N     +    G KTG+T 
Sbjct: 189 QNETFRIIIGTKMYTIPPTNKHAEETVLRNHHDMLCTYHNANR-KYLYPYCVGGKTGYTA 247

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +   +V  A +   +LI V++     N     + +L    F N               +
Sbjct: 248 TANSTLVTYAEKDGMTLICVVMDTQSPNQ-FIDTVNLFDYAFDNFQVLNVAENDTDYSAE 306

Query: 283 QNLSN---------EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             + N            +    +   +    +  +   E  D +         T     +
Sbjct: 307 TTVDNGNLDNIAPFVELDKEAVIVLPKTAEFSDTSSSVEYNDSDPEIAGSITYTYAGRNV 366

Query: 334 TK 335
            K
Sbjct: 367 GK 368


>gi|196039076|ref|ZP_03106383.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
 gi|196030221|gb|EDX68821.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
          Length = 374

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 83/342 (24%), Positives = 137/342 (40%), Gaps = 17/342 (4%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                    E    +  +K   DK +  +D  K+      + 
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGKTGVYVG 333


>gi|256253946|ref|ZP_05459482.1| cobalamin synthesis protein P47K [Brucella ceti B1/94]
          Length = 630

 Score =  162 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 111/303 (36%), Positives = 176/303 (58%), Gaps = 11/303 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR +    A+A         +   +        +D  TG V  +      W PASLTK+M
Sbjct: 1   MRIWFA--AVAFSGIALSGAAANPSIA------VDVATGKVYEQQDAFQRWYPASLTKMM 52

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 53  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 112

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 113 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 172

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 173 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 232

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 233 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 291

Query: 299 TQK 301
            Q 
Sbjct: 292 EQA 294


>gi|254719144|ref|ZP_05180955.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. 83/13]
 gi|265984138|ref|ZP_06096873.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
 gi|264662730|gb|EEZ32991.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella sp. 83/13]
          Length = 410

 Score =  162 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTASVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNKHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   + + P++  ++ 
Sbjct: 264 SAGQRDGQMAKLLTR-FGGADNGKAAPLVAMAKPQAVTAKQKPDVVADLI 312


>gi|157964469|ref|YP_001499293.1| penicillin-binding protein dacF precursor [Rickettsia massiliae
           MTU5]
 gi|157844245|gb|ABV84746.1| Penicillin-binding protein dacF precursor [Rickettsia massiliae
           MTU5]
          Length = 313

 Score =  162 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 17  IFVVTFFFAPISEATKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 76

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 77  YLMFEAIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 136

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 137 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLAMALKRDYP 196

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 197 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 256

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +          N S  
Sbjct: 257 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKPSIKLASNNKSTT 299


>gi|34580546|ref|ZP_00142026.1| penicillin-binding protein dacF precursor [Rickettsia sibirica 246]
 gi|28261931|gb|EAA25435.1| penicillin-binding protein dacF precursor [Rickettsia sibirica 246]
          Length = 306

 Score =  162 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFVVTFFFAPISEAKKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +          N S  
Sbjct: 250 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKPSIKLASNNKSTT 292


>gi|294496884|ref|YP_003560584.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium QM B1551]
 gi|295702251|ref|YP_003595326.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium DSM 319]
 gi|294346821|gb|ADE67150.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium QM B1551]
 gi|294799910|gb|ADF36976.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium DSM 319]
          Length = 451

 Score =  162 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 151/380 (39%), Gaps = 52/380 (13%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET--------NKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +Q + +IA+ +++++F   + A           +     L++ +TG V+     D     
Sbjct: 7   KQLICVIAVMLMASVFFVSTQASAAPKTDDIGVEADAAILVEASTGKVLYGKNTDALLGI 66

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKN----ASEYPPSNSTFKKGSTMTLDNALK 109
           AS+TK+MT Y+V   +K+KK      + +SK     + +Y  SN    +    T+     
Sbjct: 67  ASMTKMMTEYLVLESIKDKKLSWDQRVPVSKYAAKISQDYGLSNVPLIENQKYTVKELYD 126

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------- 160
            + + SAN  A+A+AE++  +E+ F++ MN T+K L +  + F+N+ G+           
Sbjct: 127 AMAIYSANGAAIALAEAVSGSEENFIKLMNETAKRLNMGESKFVNSTGLSNSLLKGMYPK 186

Query: 161 -----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA---- 206
                  +  +AR +A L++ +  D+P+ +   +              K  N N      
Sbjct: 187 GTKEEDENLLSARAVATLAYHLIHDYPESLEVAKTPSKMFRQGQQGETKMNNWNKMLPGF 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-----DRNTRNKVSASLLS 261
              + G DG+KTG T  +G     +A +     I V++ A          R   +  +L 
Sbjct: 247 SAAYSGVDGLKTGHTDFAGQCFTGTAERNGVRYITVVMNAKENGKSTEAARFSQTKKILD 306

Query: 262 MGFYNKTDRKKI---------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
             F +   ++ +           I     +   ++  P  S ++ T + +  +     K 
Sbjct: 307 YAFSHFQLKEVVPANGEIKGHETIDVAKGKSKEASVSPKNSVKIITEKGQKDHTKINFKL 366

Query: 313 AK---DKESHFIDFEKITLL 329
                + +      +K   +
Sbjct: 367 NDKVMNDQKVVAPIKKGETV 386


>gi|306838136|ref|ZP_07470992.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NF 2653]
 gi|306406726|gb|EFM62949.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NF 2653]
          Length = 397

 Score =  162 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 11  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 70

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 71  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 130

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 131 GSEAAFARLMTQRARQIGMKSTIFANPSGLTASVSQLTTARDMAVLGMALRRDFPEEYAL 190

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 191 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNKHLVGVVLGAG 250

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   + + P++  ++ 
Sbjct: 251 SAGQRDGQMAKLLTR-FGGADNGKAAPLVAMAKPQAVTAKQKPDVVADLI 299


>gi|167773011|ref|ZP_02445064.1| hypothetical protein ANACOL_04399 [Anaerotruncus colihominis DSM
           17241]
 gi|167664944|gb|EDS09074.1| hypothetical protein ANACOL_04399 [Anaerotruncus colihominis DSM
           17241]
          Length = 763

 Score =  162 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 12/268 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                     L+D +TG ++ E   +    PAS+TK+MT  +     K    +  T   +
Sbjct: 56  PPELYAESAILVDADTGQILLEKNMNKKMYPASITKIMTCLLAMERAKPGDVVTVTDEVV 115

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           ++   +   ++     G  +T++     ++V+SAND A  +A  +  + + F   MN+ +
Sbjct: 116 AEVPRDT--THIALTGGEQLTVEQLEYAMMVESANDAASVLAAHISGSTQAFAMLMNDRA 173

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP------QYMHYFQIKGLEIK 196
           K LG   THF NA+G+    HYT+A DMA+++                 +       + +
Sbjct: 174 KELGAKDTHFTNANGLPDPSHYTSAYDMALITRAAMQYPEFRSLAGTTSYEIPPTNKQSE 233

Query: 197 GKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD-RNTR 252
            ++  N N+      T+ GA   KTG+T  +G  +V  A +   +LI +++ +    + +
Sbjct: 234 TRRLNNRNYMFTLNDTYPGAFAGKTGWTEEAGHTLVTLAERDGVTLICIVMHSDGVVDAQ 293

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDF 280
              S ++L  GF N T        ++  
Sbjct: 294 YIDSTAILDYGFDNYTRAVVSKDRVEPK 321


>gi|118497499|ref|YP_898549.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           novicida U112]
 gi|195536192|ref|ZP_03079199.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           novicida FTE]
 gi|118423405|gb|ABK89795.1| D-alanyl-D-alanine carboxypeptidase [Francisella novicida U112]
 gi|194372669|gb|EDX27380.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           novicida FTE]
          Length = 444

 Score =  162 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 147/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T +
Sbjct: 47  PANIELDAPAWVAMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMV 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKGLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSAKQDSERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKTGQTVGNLVI 418


>gi|254564164|ref|YP_003071259.1| D-alanyl-D-alanine carboxypeptidase [Methylobacterium extorquens
           DM4]
 gi|254271442|emb|CAX27457.1| putative D-alanyl-D-alanine carboxypeptidase [Methylobacterium
           extorquens DM4]
          Length = 494

 Score =  162 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 12/336 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPWNPA 54
           ++++A + L  +                          ++D  +G  +     D   +PA
Sbjct: 17  VLLLATSFLVAVADPAEAKRRGHARKAVSGYNPPYAAMVVDVKSGRTLHAVNEDALRHPA 76

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT Y++F  L++ +  L +P++IS NA+   PS    + GST+T++ A+K L+ K
Sbjct: 77  SITKVMTLYMLFEQLEKGRYDLDSPLSISANAAAQAPSKLGLRPGSTVTVEEAIKALVTK 136

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A AI E++  +E +F + M   +K LG+S TH+ NA G+      TTA D+ +L+
Sbjct: 137 SANDVACAIGENIAGSEPRFAEMMTRKAKALGMSRTHYANASGLPDPDQITTAYDLTLLA 196

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ +A  
Sbjct: 197 RAIQDRFPRYYRYFQTRSFAFRGRTIGNHNRLLGNVEGVDGIKTGYTRDSGFNLMTAAKL 256

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ ++A++LG     +R+++ A L+           +    + +  ++     V     
Sbjct: 257 GDRQIVAIVLGGKSGASRDRIMADLVRANLPRAFAGSRQTAPVVEVAERGRPAVVAEADS 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              T        +  ++      +  +D    T   
Sbjct: 317 RTRTVIASAD--DEDIETTSSTSNAPLDIRPATTTP 350


>gi|187932735|ref|YP_001884791.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187720888|gb|ACD22109.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum B
           str. Eklund 17B]
          Length = 443

 Score =  162 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 21/327 (6%)

Query: 1   MRQFLVIIAMAMLSNIFP-FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++  +  + + ++S+I    +S           L+D +TG ++    PD    PAS TK+
Sbjct: 9   LKTLIFFLFIFLVSSINVMAVSSPPEINAEGSVLMDASTGEILFSKNPDKVLEPASTTKV 68

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA +           L   + ++++ ++   +     KG  +T+ + L  L+++S ND 
Sbjct: 69  MTAILTLENCD-----LNEEVVVTEDFTKIDGTTIGLLKGDIVTVKDLLLGLLLESGNDA 123

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A+A  +  +  KF   MN  +  +G   THF N  G+    H TTA D+A++      
Sbjct: 124 ANALACHVSSSIDKFAVLMNKKATEIGAVNTHFKNPSGLPDPEHLTTAHDLALIMNEAIK 183

Query: 180 DF------PQYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNI 228
           +           +   IK    +     N N       +  +      K G+T  S    
Sbjct: 184 NDKFLELSKVMTYEIPIKNDSSRTIWINNKNHMINKNSMYYYQYTLTGKNGYTTKSNHTY 243

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-DFYQQNLSN 287
             +A      L+A  L ALD++   +   ++ + GF N           + D  + +   
Sbjct: 244 TVAAENNGHILVASYLNALDKDKNFEDMRTVFNYGFNNFYFSNIYKKGQEIDSIKLHNGL 303

Query: 288 EVPNISEEV---CTTQKEIINYNTQMK 311
            VP I+ +        ++    NT +K
Sbjct: 304 TVPLIASKDVNCVVPNEDKDKLNTYIK 330


>gi|254369366|ref|ZP_04985378.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
           subsp. holarctica FSC022]
 gi|157122316|gb|EDO66456.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
           subsp. holarctica FSC022]
          Length = 444

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 146/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+S  Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSVKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKTGQNVGNLVI 418


>gi|240141656|ref|YP_002966136.1| putative D-alanyl-D-alanine carboxypeptidase [Methylobacterium
           extorquens AM1]
 gi|240011633|gb|ACS42859.1| putative D-alanyl-D-alanine carboxypeptidase [Methylobacterium
           extorquens AM1]
          Length = 494

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 12/336 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPWNPA 54
           ++++A + L  +                          ++D  +G  +     D   +PA
Sbjct: 17  VLLLATSFLVAVADPAEAKRRGHARKAVSGYNPPYAAMVVDVKSGRTLHAVNEDALRHPA 76

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT Y++F  L++ +  L +P++IS NA+   PS    + GST+T++ A+K L+ K
Sbjct: 77  SITKVMTLYMLFEQLEKGRYDLDSPLSISANAAAQAPSKLGLRPGSTVTVEEAIKALVTK 136

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A AI E++  +E +F + M   +K LG+S TH+ NA G+      TTA D+ +L+
Sbjct: 137 SANDVACAIGENIAGSEPRFAEMMTRKAKALGMSRTHYANASGLPDPDQITTAHDLTLLA 196

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ +A  
Sbjct: 197 RAIQDRFPRYYRYFQTRSFAFRGRTIGNHNRLLGNVEGVDGIKTGYTRDSGFNLMTAAKL 256

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ ++A++LG     +R+++ A L+           +    + +  ++     V     
Sbjct: 257 GDRQIVAIVLGGKSGASRDRIMADLVRANLPRAFAGSRQTAPVVEVAERGRPAVVAEADS 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              T        +  ++      +  +D    T   
Sbjct: 317 RTRTVLASAD--DEDIETTSSTSNAPLDIRPATTTP 350


>gi|218533141|ref|YP_002423957.1| serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           chloromethanicum CM4]
 gi|218525444|gb|ACK86029.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           chloromethanicum CM4]
          Length = 494

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 12/336 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPWNPA 54
           ++++A + L  +                          ++D  +G  +     D   +PA
Sbjct: 17  VLLLATSFLVAVADPAEAKRRGHARKAVSGYNPPYAAMVVDVKSGRTLHAVNEDALRHPA 76

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT Y++F  L++ +  L +P++IS NA+   PS    + GST+T++ A+K L+ K
Sbjct: 77  SITKVMTLYMLFEQLEKGRYDLDSPLSISANAAAQAPSKLGLRPGSTVTVEEAIKALVTK 136

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A AI E++  +E +F + M   +K LG+S TH+ NA G+      TTA D+ +L+
Sbjct: 137 SANDVACAIGENIAGSEPRFAEMMTRKAKALGMSRTHYANASGLPDPDQITTAHDLTLLA 196

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ +A  
Sbjct: 197 RAIQDRFPRYYRYFQTRSFAFRGRTIGNHNRLLGNVEGVDGIKTGYTRDSGFNLMTAAKL 256

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ ++A++LG     +R+++ A L+           +    + +  ++     V     
Sbjct: 257 GDRQIVAIVLGGKSGASRDRIMADLVRANLPRAFAGSRQTAPVVEVAERGRPAVVAEADS 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              T        +  ++      +  +D    T   
Sbjct: 317 RTRTVLASAD--DEDIETTSSTSNAPLDIRPATTTP 350


>gi|15894549|ref|NP_347898.1| D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum
           ATCC 824]
 gi|15024194|gb|AAK79238.1|AE007639_11 D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum
           ATCC 824]
 gi|325508682|gb|ADZ20318.1| D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum EA
           2018]
          Length = 425

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/371 (21%), Positives = 146/371 (39%), Gaps = 46/371 (12%)

Query: 1   MRQFLVI------IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           MR+ ++       +   +  NI+  +            L+D N+G ++ E   +  + PA
Sbjct: 1   MRKLIIFTLTVMFLFSTININIYAKVPDPPNVSADGAVLMDGNSGQILYEKNMNASYPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S TK+MTA +     K    +  +    +K  +    ++     G  +T+ + L  L++ 
Sbjct: 61  STTKIMTALLTLEKCKLDDKVKVSNDFTTKYLALRDGNSIGITNGEELTVRDLLHALLLI 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND AVA+AE +  + + F   MN  +  LG + T+F N +G+    H T+A+D+A++ 
Sbjct: 121 SANDAAVALAEHISGSPQAFATLMNKKAAELGCTNTNFKNPNGLYDKDHKTSAKDLALIM 180

Query: 175 WRIKT-----------DFPQYMHYFQIKGLEIKGKKYPNTNWAVG-----TFLGADGMKT 218
             +             ++              K + + N +  V       +    G K 
Sbjct: 181 KELSKYPEYQKISTTLNYQMSPTNNMDAEKTKKSRNFWNEDKLVYKNSKNYYDKCIGGKA 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+T  S  + V+ A    + L+  ++ +    T    S +L   GF N   +K  +    
Sbjct: 241 GYTILSLHSFVSVANNNGRKLVVALVHSK-EKTFYDDSKALFEYGFNNFQQKKLFSKGDI 299

Query: 279 DFYQ-------------------QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
                                  +N S  VP +  +  + +K+  +  TQ+  AK     
Sbjct: 300 VENYYLDGTKIPLLASEDYYYCTENGSKSVPKVQVDKNSLKKKYFSKGTQIMAAK----I 355

Query: 320 FIDFEKITLLK 330
            ID ++I  LK
Sbjct: 356 SIDGKQIGTLK 366


>gi|165933122|ref|YP_001649911.1| D-alanyl-D-alanine serine-type carboxypeptidase [Rickettsia
           rickettsii str. Iowa]
 gi|165908209|gb|ABY72505.1| D-alanyl-D-alanine serine-type carboxypeptidase [Rickettsia
           rickettsii str. Iowa]
          Length = 306

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 88/286 (30%), Positives = 138/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
             +V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  ILVVTFFFAPISEAKKAVRNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  A++ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKAAKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARD+A L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDIAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  ++         N S  
Sbjct: 250 VTGGKSAESRDQKMMGLLD---QHFNIKPIVSKPAIKLASNNKSTT 292


>gi|52081783|ref|YP_080574.1| putative carboxypeptidase [Bacillus licheniformis ATCC 14580]
 gi|52787169|ref|YP_092998.1| hypothetical protein BLi03478 [Bacillus licheniformis ATCC 14580]
 gi|319647699|ref|ZP_08001917.1| hypothetical protein HMPREF1012_02956 [Bacillus sp. BT1B_CT2]
 gi|52004994|gb|AAU24936.1| putative carboxypeptidase [Bacillus licheniformis ATCC 14580]
 gi|52349671|gb|AAU42305.1| putative protein [Bacillus licheniformis ATCC 14580]
 gi|317390040|gb|EFV70849.1| hypothetical protein HMPREF1012_02956 [Bacillus sp. BT1B_CT2]
          Length = 384

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 80/321 (24%), Positives = 134/321 (41%), Gaps = 22/321 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           R  L II + +                  K     L+D  +G V+ E        PAS+T
Sbjct: 5   RSLLFIIVLCLTLFFHSSAQAGEKNKPEIKSVSAILIDGKSGQVLYEKNSRKKMYPASIT 64

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+ TA             L   + +SKNA++   S+   ++G ++ L   L+ L++ S N
Sbjct: 65  KIATAIYAIEN-----GNLEDRVKVSKNAAQTEGSSVYLEEGESVPLKRLLQGLLMNSGN 119

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNL-GLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           D   AIAE L  + K+F   +N       G+  THFMN HG+    HYTT+ DMA ++  
Sbjct: 120 DAGTAIAEHLSGSVKQFADDLNAFIAEHAGVHDTHFMNPHGLFDKNHYTTSADMARITEY 179

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVG---TFLGADGMKTGFTCASGFNIV 229
                  +   F  K  +  G+ +     N +  +     + G  G KTGF   S   +V
Sbjct: 180 -AMKNKTFRALFSEKQTDWHGQTWDTTLKNHHRMLTGEIPYKGITGGKTGFVDESKHTLV 238

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
            +A +G   LIAV++ A  +      + +LL  GF+N   ++      K     + +   
Sbjct: 239 TTATRGSLDLIAVVMKADSKKMMYSDTKALLDEGFHNFETQEL----KKGEAFTDQNGTS 294

Query: 290 PNISEEVCTTQKEIINYNTQM 310
             + + +  T+K+    +  +
Sbjct: 295 HELKDPLYVTKKKGEVLSENV 315


>gi|89256395|ref|YP_513757.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           family protein [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314839|ref|YP_763562.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|156502486|ref|YP_001428551.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010417|ref|ZP_02275348.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367733|ref|ZP_04983754.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           [Francisella tularensis subsp. holarctica 257]
 gi|290953818|ref|ZP_06558439.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312829|ref|ZP_06803561.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89144226|emb|CAJ79499.1| D-alanyl-D-alanine carboxypeptidase (Penicillin binding protein)
           family protein [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129738|gb|ABI82925.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134253544|gb|EBA52638.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein)
           [Francisella tularensis subsp. holarctica 257]
 gi|156253089|gb|ABU61595.1| D-alanyl-D-alanine carboxypeptidase [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 444

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 146/372 (39%), Gaps = 58/372 (15%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  +D  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVTMDYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVRNLVTGMDVVSGNDATIALAEYIGGTTQAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTVKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+S  Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSVKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFID 322
           +           I  D      + +   ++      +     Y   +K+  +   +    
Sbjct: 347 NVLLYKANSPVTISADNIPNAKAGQKLTVASNQNIYKTVPKTYVPYLKQGIEFNPNLNAP 406

Query: 323 FEKITLLKNKIT 334
            +    + N + 
Sbjct: 407 IKTGQNVGNLVI 418


>gi|138895855|ref|YP_001126308.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267368|gb|ABO67563.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 446

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 130/330 (39%), Gaps = 21/330 (6%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+++     L+ +   ++S +   L            L++ ++G ++           AS
Sbjct: 66  MKRWKRLVWLIALTAGIMSCLPGKLHAMNGVSAKSAILIEQHSGRILFAKDAHTKRRIAS 125

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     L   +T+S  A     S+   ++G  M L + +  L+++S
Sbjct: 126 ITKIMTAILAIESGK-----LDDTVTVSARAVRTEGSSIYLRQGEKMKLRDLVYGLMLRS 180

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILS 174
            ND AVAIAE +  + + FV  MN  +  +G+  T F N HG+     HY+TA DMA+L 
Sbjct: 181 GNDAAVAIAEHVGGSVEGFVFLMNEKAAEIGMRDTEFANPHGLDDAESHYSTAYDMALLM 240

Query: 175 WRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFN 227
                +           +       E   + + N N  + + +    G KTG+T  +   
Sbjct: 241 QYAMKNKEFRRISGTKVYRAPAPPGEDGARVWRNKNKLLTSLYEYCTGGKTGYTKRAHRT 300

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           +V +A +    L+AV L A D         ++   GF N    K     I          
Sbjct: 301 LVTTASKDGIDLVAVTLDASDD---WNDHIAMYEYGFSNYRIAKVSGKRIVKRISDPFYK 357

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
                + ++     E      ++K    K 
Sbjct: 358 GRLQAARDLRYPVTEKEMGELRVKVYLLKP 387


>gi|13474143|ref|NP_105711.1| penicillin-binding protein [Mesorhizobium loti MAFF303099]
 gi|14024895|dbj|BAB51497.1| penicillin-binding protein [Mesorhizobium loti MAFF303099]
          Length = 304

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 90/258 (34%), Positives = 145/258 (56%), Gaps = 3/258 (1%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +++ +A  S   P    L++    +     ++D  TG  + E        PASLTK+MT 
Sbjct: 26  LLLMVAGCSTATPPDQVLTVPAPPQKYAAIVVDVKTGKQMFEVNSTAQRYPASLTKMMTL 85

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  +    T I +S +A+  PP+   F++G T+ +D+A++ ++VKSAND+AVA
Sbjct: 86  YLLFEAMESGRVTKETQIPVSDHAASQPPTKMRFRRGETIDVDSAIRAIVVKSANDVAVA 145

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           + E L  +E +F   M + +++LG+++T F NA G+   G  TTARDMA+L   ++  FP
Sbjct: 146 VGEYLGGSEDRFAAMMTSKARSLGMTSTTFRNASGLPDDGQMTTARDMAVLGMALRQRFP 205

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           Q+ HYF       +G+     N  +G   G DG+KTG+  ASGFNIV S     + LI V
Sbjct: 206 QHFHYFSESDFMFRGRLVRGHNDMLGRVRGVDGIKTGYIRASGFNIVTSYNADGRQLIVV 265

Query: 243 ILGALDRNTRNKVSASLL 260
           ++GA     RN    +L+
Sbjct: 266 VMGADSARQRNDHVEALI 283


>gi|15604254|ref|NP_220770.1| penicillin-binding protein DACF precursor (dacF) [Rickettsia
           prowazekii str. Madrid E]
 gi|3860946|emb|CAA14846.1| PENICILLIN-BINDING PROTEIN DACF PRECURSOR (dacF) [Rickettsia
           prowazekii]
 gi|292572000|gb|ADE29915.1| Penicillin-binding protein dacF precursor [Rickettsia prowazekii
           Rp22]
          Length = 306

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 89/291 (30%), Positives = 141/291 (48%), Gaps = 3/291 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F++I   A +S     +     + +    ++D   G V+  +       PASLTKLMT 
Sbjct: 10  IFILIFCFAPISEAKKIVKNTNKHPIQTSLVIDAKNGKVLQAHNAQVRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++ +K  L   + +S  AS+ P      + G  +T+  A+  LI+KSAND+AV 
Sbjct: 70  YLIFEAIESRKLSLDKKLLVSAKASKMPHCKLGLRAGDHITVREAINGLIIKSANDVAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T F NA G+      TTARD+A L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVRAKTLGMKNTFFKNASGLHDPFQQTTARDIAKLAIALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y   F       +G      N     + GA+GMKTGF   +G+N+V +A + ++SLIAV
Sbjct: 190 KYYPLFSKTHFVFRGNVVNGHNSVTKHYQGAEGMKTGFHTPAGYNLVTTASRNNKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           I G     +R++    LL     +   +   +         N +N      
Sbjct: 250 ITGGKSAASRDQKMMRLLDH---HFGVKTITSKPSIKLASNNKANTKAKSK 297


>gi|294852342|ref|ZP_06793015.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NVSL 07-0026]
 gi|294820931|gb|EFG37930.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. NVSL 07-0026]
          Length = 410

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F       +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQCSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   +   P++  ++ 
Sbjct: 264 SAGQRDGQMAKLLTR-FGGVDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 312


>gi|169334343|ref|ZP_02861536.1| hypothetical protein ANASTE_00741 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259060|gb|EDS73026.1| hypothetical protein ANASTE_00741 [Anaerofustis stercorihominis DSM
           17244]
          Length = 369

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 20/324 (6%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++    ++I+ M +++        A       Y +++  +  V+  +  +     AS T
Sbjct: 1   MKKKSIAIIIVMMILINLPNFGGVKAANVSAQAYCIMEAGSNRVLYSSNMNEKLPMASTT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA +           L   I I K  +    ++   K+G  +TL++ L  +++ S N
Sbjct: 61  KVMTAVLALEK-----GSLNDVIEIKKEWTGIEGTSIYLKEGEKLTLEDLLHGMMLVSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D AV+IA  +  +   F + MN  +K LG+  THF N +G+    HYTTA D  +L+   
Sbjct: 116 DAAVSIACYIGGSIDNFAKMMNKKAKELGMKNTHFTNPNGLPDDDHYTTAYDFTLLASYA 175

Query: 178 KTDFPQYMHYFQIKGL-----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
             +          K       +   +   N N  + ++ GA+G+KTGFT  +    V +A
Sbjct: 176 MKNENFVKIINDEKWSMPYEGKANQRTLYNKNKLLKSYEGANGVKTGFTKKARKCFVLAA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI--IKDFYQQNLSNEVP 290
            + +  ++ V+L         + S   L M F N T +K I     +K    +   N + 
Sbjct: 236 KRNNMQVVGVLLH---TENHYEESKMFLDMAFNNFTLKKVIEKGDYVKTVPMKGSKNGII 292

Query: 291 NISE--EVCTTQKEIINYNTQMKE 312
            +S   +V    K     + + K+
Sbjct: 293 KLSAGSDVYFPLKSDEIADVKYKK 316


>gi|205373775|ref|ZP_03226577.1| D-alanyl-D-alanine carboxypeptidase [Bacillus coahuilensis m4-4]
          Length = 318

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 123/320 (38%), Gaps = 19/320 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   L +  +  +      +  A         L+D  TG V+ E   +     AS+TK+M
Sbjct: 7   MAYLLTVFLLGSVCFRPLDVQAAPGVSAHSAILMDQETGRVLYEKNAEQQMKIASITKIM 66

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V           L   +T+S NA+    S+     G  M L++ L  L+++S ND A
Sbjct: 67  TAIVAIESDD-----LQDTVTVSSNAAGTEGSSLYLVAGQKMKLEDLLYGLMLRSGNDSA 121

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE +  + + FV  MN  ++ +G+  T+F N HG+     + +      L  +   +
Sbjct: 122 VAIAEHVGGSLEGFVYLMNQKAEEIGMENTNFDNPHGLDDSDTHLSTSYDMALLMKYSMN 181

Query: 181 FPQYMHYFQIKGLEIKG------KKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAI 233
              +      +  +           + N N  +   +    G KTG+T  +   +V +A 
Sbjct: 182 NETFQEISSTEVHKAPNPNGDWDYSWHNKNRLLTQLYEYCTGGKTGYTKLAKRTLVTTAE 241

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEV 289
           +  + LIAV L   D         S+   GF                IKD Y +      
Sbjct: 242 KDGEKLIAVTLNGPDD---WNDHISMYEYGFDQFDYYVLAKKGSLSEIKDSYYKGKVYIK 298

Query: 290 PNISEEVCTTQKEIINYNTQ 309
             I   +   +K+ +   T+
Sbjct: 299 HEIKYSIKELEKKRLESITK 318


>gi|291532362|emb|CBL05475.1| D-alanyl-D-alanine carboxypeptidase [Megamonas hypermegale ART12/1]
          Length = 376

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 84/321 (26%), Positives = 133/321 (41%), Gaps = 18/321 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        L+D  TG V+ E  PD    PAS TK+MT  +      +        + + 
Sbjct: 26  QDMTAQAAILIDATTGRVLYEKNPDAKAMPASTTKMMTCILGLENAND-----DDIVEVD 80

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTS 142
           K A     S     +G  + +   L+  ++ S ND A AIA  + K   + FVQ MN+ +
Sbjct: 81  KRAVGVEGSAIYINEGDKIKMSELLQATMLASGNDGAAAIAYYVGKGSLETFVQMMNDKA 140

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--- 199
           K +G + THF N HG+    HYTTARD+A ++        ++      K  EI+      
Sbjct: 141 KEIGATNTHFNNPHGLTDPNHYTTARDLAKIARY-AYQNEKFRKIVSTKEQEIQWVNPAE 199

Query: 200 ----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
               Y +TN  +  +    G+KTG+T A+G  +VASA +   +LIAV+L   D   R   
Sbjct: 200 RKDIYGSTNRLLWNYDDVTGIKTGYTDAAGGCLVASAQKNGITLIAVVLKTSDSRARFVE 259

Query: 256 SASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISE--EVCTTQKEIINYNTQMK 311
             +LL  GF +  + K +    +I   Y  N +N    +           +  N N    
Sbjct: 260 GRALLDYGFKHIKEMKTVDEQKLISSIYTHNSTNYKTTVKPVQPFTYLVMDTDNVNDFSW 319

Query: 312 EAKDKESHFIDFEKITLLKNK 332
           +           ++   +   
Sbjct: 320 KMNLPAYIDAPLKQGAKVGTI 340


>gi|256061158|ref|ZP_05451311.1| D-alanyl-D-alanine carboxypeptidase [Brucella neotomae 5K33]
 gi|261325163|ref|ZP_05964360.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
 gi|261301143|gb|EEY04640.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella neotomae 5K33]
          Length = 410

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++  +       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGRDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   +   P++  ++ 
Sbjct: 264 SAGQRDGQMAKLLTR-FGGVDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 312


>gi|317121890|ref|YP_004101893.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
 gi|315591870|gb|ADU51166.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermaerobacter
           marianensis DSM 12885]
          Length = 541

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 78/303 (25%), Positives = 126/303 (41%), Gaps = 19/303 (6%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           +G V+  + P     PAS TK++TA V   +       L   +T+S+ A+    S     
Sbjct: 215 SGQVLWAHNPHQRRAPASTTKILTAIVALEY-----GNLDDTVTVSEYAASTEGSTMDLS 269

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
            G   TL   L  L+++S ND AVAIAE +  +E  F + MN T+  LGL  THF N HG
Sbjct: 270 AGERYTLRELLWGLMLESGNDAAVAIAEHISGSEAAFARLMNETALRLGLRDTHFTNPHG 329

Query: 158 VVQHGHYTTARDMAILSWRI-KTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG 212
           +   GHYTTA D+A+++      D+   +     K L      +     +TN  +     
Sbjct: 330 LHDPGHYTTAYDLAVMTRYALANDYFARLVCQPEKVLCRGDGDWVRILSSTNRLLWYREW 389

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR-- 270
             G+KTG T A+G  +V+S  +  + LIAV+L + D   R   S  LL  GF        
Sbjct: 390 IRGVKTGTTNAAGPCLVSSGERDGRRLIAVVLDSGD---RWADSERLLEWGFRAFQPVDG 446

Query: 271 ----KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
               + +  +      +       +                  ++  +   +     +++
Sbjct: 447 GRRGQVVGRVAVHDGSRRAVAARLDGDLSALVPPAVAGRVRRVVQLVRTVPAPVAPGQRL 506

Query: 327 TLL 329
             +
Sbjct: 507 GTV 509


>gi|238650925|ref|YP_002916781.1| penicillin-binding protein dacF precursor [Rickettsia peacockii
           str. Rustic]
 gi|238625023|gb|ACR47729.1| penicillin-binding protein dacF precursor [Rickettsia peacockii
           str. Rustic]
          Length = 306

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFVVTFFFAPISEAKKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIQIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +          N S  
Sbjct: 250 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKPSIKLASNNKSTT 292


>gi|319780264|ref|YP_004139740.1| serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166152|gb|ADV09690.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 295

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 87/243 (35%), Positives = 136/243 (55%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
             L++    +     ++D  TG  + E        PASLTK+MT Y++F  L+  +    
Sbjct: 33  SVLAVPAPAQKYAAIVVDARTGKQLFEVSSTAQRYPASLTKMMTLYLLFEALESGRVSKQ 92

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           T I +S +A+  PP+   F++G ++ +D+A++ ++VKSAND+AVA+ E L  +E +F   
Sbjct: 93  TQIPVSDHAASQPPTKMRFRRGESIDVDSAIRAIVVKSANDVAVAVGEYLGGSEDQFAAM 152

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           M + ++ LG+++T F NA G+   G  TTARDMA+L   +   FPQ  HYF       +G
Sbjct: 153 MTSKARQLGMTSTTFRNASGLPDDGQMTTARDMAVLGMALHQRFPQQFHYFSESDFMFRG 212

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +     N  +G   G DG+KTG+  ASGFNIV S     ++LI V++GA     RN    
Sbjct: 213 RLVRGHNDMLGRVRGVDGIKTGYIRASGFNIVTSYNADGRNLIVVVMGADSARQRNDHVE 272

Query: 258 SLL 260
           +L+
Sbjct: 273 ALI 275


>gi|163854196|ref|YP_001642239.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           extorquens PA1]
 gi|163665801|gb|ABY33168.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylobacterium
           extorquens PA1]
          Length = 494

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 90/336 (26%), Positives = 163/336 (48%), Gaps = 12/336 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPWNPA 54
           ++++A + L  +                          ++D  +G  +     D   +PA
Sbjct: 17  VLLLATSFLVAVADPAEAKRRGHARKAVSGYNPPYAAMVVDVKSGRTLHAVNEDALRHPA 76

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TK+MT Y++F  L++ +  L +P++IS NA+   PS    + GST+T++ A+K L+ K
Sbjct: 77  SITKVMTLYMLFEQLEKGRYDLDSPLSISANAAAQAPSKLGLRPGSTVTVEEAIKALVTK 136

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A AI E++  +E +F + M   +K +G+S TH+ NA G+      TTA D+ +L+
Sbjct: 137 SANDVACAIGENIAGSEPRFAEMMTRKAKAIGMSRTHYANASGLPDPDQITTAHDLTLLA 196

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ +A  
Sbjct: 197 RAIQDRFPRYYRYFQTRSFAFRGRTIGNHNRLLGNVEGVDGIKTGYTRDSGFNLMTAAKL 256

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           GD+ ++A++LG     +R+++ A L+           +    + +  ++     V     
Sbjct: 257 GDRQIVAIVLGGKSGASRDRIMADLVRANLPRAFAGSRQTAPVVEVAERGRPAVVAEADS 316

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              T        +  ++      +  +D    T   
Sbjct: 317 RTRTVLASAD--DEDIETTSSTSNAPLDIRPATTTP 350


>gi|118591400|ref|ZP_01548798.1| Serine-type D-Ala-D-Ala carboxypeptidase [Stappia aggregata IAM
           12614]
 gi|118436072|gb|EAV42715.1| Serine-type D-Ala-D-Ala carboxypeptidase [Stappia aggregata IAM
           12614]
          Length = 457

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 98/238 (41%), Positives = 146/238 (61%), Gaps = 1/238 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y L+D ++G VI E      W PASLTKLMTAYV F  ++E +A L + +  SKN++  
Sbjct: 14  AYVLIDASSGAVIEEENATRKWYPASLTKLMTAYVTFKAIREGRASLDSAVVQSKNSAAE 73

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
           PPS   FK G+  T+D ALK++++KSAND+AVA+ E++  +E  F+  MN  ++ LG++ 
Sbjct: 74  PPSKMGFKVGTRFTVDTALKIILIKSANDVAVALGEAIGGSEAGFIAMMNVEAQRLGMTN 133

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-G 208
           T F N HG+  +   TTARD+AIL+  ++ DFP+  +++   G+    K   + N     
Sbjct: 134 TRFYNPHGLPDNRQVTTARDLAILALALRRDFPEARNFYDHPGIRFGKKTLRSANREFLL 193

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
              GA+GMKTG+ C SG+N+ ASA +G+++LIA+ILGA     R   +  L   GF  
Sbjct: 194 RVPGANGMKTGYICNSGYNVAASATRGNKTLIAIILGAGSGLERTAFARQLFDEGFRK 251


>gi|297529545|ref|YP_003670820.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. C56-T3]
 gi|297252797|gb|ADI26243.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. C56-T3]
          Length = 460

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 125/320 (39%), Gaps = 25/320 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++ ++G V+           AS+TK+MTA +     K     +   +T+S  
Sbjct: 110 VSAKSAILIEQHSGRVLFAKDAYTKRRIASITKIMTAILAIESGK-----MDDTVTVSAR 164

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S+   ++G  + L + +  L+++S ND AVAIAE +  + + FV  MN  +  +
Sbjct: 165 AVRTEGSSIYLRQGEKIKLRDLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNQKAAEI 224

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-------KGK 198
           G+  T F N HG+    ++ +      +  +      ++      K             +
Sbjct: 225 GMRDTEFANPHGLDDAENHYSTAYDMAMLMQYAMKNKEFRRISGTKVYRAPAPPGEDGAR 284

Query: 199 KYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + N N  + + +    G KTG+T  +   +V +A +G   LIAV L A D         
Sbjct: 285 VWRNKNKLLTSLYEYCTGGKTGYTKRAHRTLVTTASKGGVDLIAVTLDAPDD---WNDHI 341

Query: 258 SLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           ++   GF +      +  + ++ I   FY +     V ++   V   ++  +     + +
Sbjct: 342 AMYEYGFSHYHIAKVSSERVVDKISDPFY-RGRLQAVRDLRYPVTDKEESGLRVKVYLLK 400

Query: 313 AKD---KESHFIDFEKITLL 329
            +    K       E    +
Sbjct: 401 PRKGWEKYPERAPTEVGKAV 420


>gi|328676052|gb|AEB28727.1| D-alanyl-D-alanine carboxypeptidase [Francisella cf. novicida 3523]
          Length = 444

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 91/373 (24%), Positives = 143/373 (38%), Gaps = 60/373 (16%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P +  ++  TG +++E   D    PASLTK+MT+Y+V S +K       T I
Sbjct: 47  PANIELDAPAWVAMNYRTGDIVSEKNMDVRRAPASLTKIMTSYIVASEIKAGNLSWDTMI 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+NA+    S    K G+ +++ N +  + V S ND  +A+AE +  T + F   MN 
Sbjct: 107 PISENAASTGGSKMYVKAGAKVSVKNLVTGMDVVSGNDATIALAEYIGGTTEAFTDLMNQ 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK- 199
           T+K +G++ THF N  G+     YTTA DMA+L+     +FP+    +  KGL     K 
Sbjct: 167 TAKAIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVYDDKGLVWNATKQ 226

Query: 200 ---------------------------------------------------YPNTNWAVG 208
                                                                N N  + 
Sbjct: 227 DSVSIADRKQCLPKFDRATGNVIESYTTKDLDDQAKDKCNKLFPKGDNFVLQNNRNRLLF 286

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           TF GADGMKTG T A+G+ +V+SA Q  +  I+V+LG      R+  SA LL        
Sbjct: 287 TFDGADGMKTGHTDAAGYCLVSSAKQDGERFISVVLGTTSSAKRDSESAKLLRYALSKYE 346

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-------SHFI 321
           +                +       +++  T  + I            +       +   
Sbjct: 347 NVLLYKAN-SPVTISADNIPNAKAGQKITVTSNQNIYKTVPKTYVPYLKQGIEFNTNLKA 405

Query: 322 DFEKITLLKNKIT 334
             +    + N + 
Sbjct: 406 PIKTGQTVGNLVI 418


>gi|85716353|ref|ZP_01047326.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           sp. Nb-311A]
 gi|85696869|gb|EAQ34754.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           sp. Nb-311A]
          Length = 582

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 81/249 (32%), Positives = 138/249 (55%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  ++   PD P +PASLTK+MT Y++F  L   +  L + + +S +A+  
Sbjct: 55  ASIVVDANSGATLSSVNPDSPRHPASLTKMMTLYMLFERLDAGRISLDSEMRVSAHAAAQ 114

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    ++G T+ +++A+K L+ KSAND AV IAE++   E  F + M   ++ LG++ 
Sbjct: 115 DPTKLGLRQGQTIRVEDAIKGLVTKSANDAAVVIAEAIAGDEDDFARMMTRKARALGMTR 174

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T + NA G+      TTARD A L   ++  FP+Y  YF       +G+     N  +G+
Sbjct: 175 TVYRNASGLPDDDQITTARDQATLGRALQDRFPRYYRYFATTSFTFRGRTVRGHNRLIGS 234

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+  +SGFN+V +  +G++ L+ V+LG    ++R+     LL+        
Sbjct: 235 VDGVDGIKTGYIRSSGFNLVTNIRRGNRHLVGVVLGGRSGSSRDATMRKLLAENLDKAAT 294

Query: 270 RKKINYIIK 278
           R+ +  I +
Sbjct: 295 RRTVAAIAE 303


>gi|256828650|ref|YP_003157378.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577826|gb|ACU88962.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfomicrobium
           baculatum DSM 4028]
          Length = 401

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 85/253 (33%), Positives = 131/253 (51%), Gaps = 1/253 (0%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++ +TG V  E+ PD    PAS+TKL+T Y++   L + +    TPI +S  A +   S 
Sbjct: 148 INMSTGDVYYEHNPDKTIAPASITKLLTLYIIREALAQGRLSQATPIPVSAEAVKTGGSR 207

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLSATHF 152
              K+   + L   +K + V SAN+  VA+AE   K    KFV  MN  +K +G+  + F
Sbjct: 208 MRLKRNEKVPLGELIKGISVVSANNACVAVAEYFGKGDPSKFVAQMNEKAKKIGMVNSRF 267

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            N +G+   G  +TARD+A LS      FP+ +    +      G  + N N  + T+ G
Sbjct: 268 KNPNGLPASGQLSTARDIAKLSVAYLRTFPESLKVHSMTSHTFHGATHRNANTLLRTYKG 327

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DG+KTGF C +G+NI A+A +G   L+AV+LGA +   R + +A LL  GF    D +K
Sbjct: 328 VDGLKTGFVCDAGYNITATAKRGKTRLVAVVLGAQNSAVRQRETARLLDYGFRRAADEEK 387

Query: 273 INYIIKDFYQQNL 285
           +        ++  
Sbjct: 388 LANKTSAAAKKPK 400


>gi|225575599|ref|ZP_03784209.1| hypothetical protein RUMHYD_03691 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037193|gb|EEG47439.1| hypothetical protein RUMHYD_03691 [Blautia hydrogenotrophica DSM
           10507]
          Length = 423

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 21/338 (6%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + SN           +     L+D NTG ++          PAS+TK+MT  +       
Sbjct: 59  ITSNQIKGWPEGPKVEAGSAVLMDANTGAILYSKNAHKKLYPASITKIMTTALAMQRC-- 116

Query: 72  KKAMLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                   +T S       +   SN     G  M + +  + +++ SAN++A AIAE  C
Sbjct: 117 ---NPDDTVTFSDYAITHQDVDSSNIGCLVGEQMKVSDCYRAIMLASANEVATAIAEQSC 173

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM--- 185
              K FV+ MN T++ +G + THF NA+G+    HYTTA DMA+++     +        
Sbjct: 174 GNLKNFVELMNQTARQIGCTRTHFNNANGLPDKHHYTTAHDMALIARYAWKNTQFRKVAT 233

Query: 186 ---HYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              +  +   L  + +   N +  +      + G  G KTG+T A+G  +V  A +G  +
Sbjct: 234 TLEYTIEPTNLYTEPRVLYNHHKMMSNTGYYYEGCLGGKTGYTQAAGNTLVTYAKRGHMT 293

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           LI V+L      T    +A+L   GF N  + +         Y     + +     +   
Sbjct: 294 LICVVLQDEGTYT-YTDTAALFDYGFNNFKNIQVEKKG--PKYLDINLDPLTQTVLDYRQ 350

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           ++  +  Y+        +      + K T++ N I  K
Sbjct: 351 SKSPMFAYHGYFITVPTEIDTDKIYAKTTIIPNPIGNK 388


>gi|225626417|ref|ZP_03784456.1| cobalamin synthesis protein P47K [Brucella ceti str. Cudo]
 gi|260169446|ref|ZP_05756257.1| cobalamin synthesis protein P47K [Brucella sp. F5/99]
 gi|225618074|gb|EEH15117.1| cobalamin synthesis protein P47K [Brucella ceti str. Cudo]
          Length = 635

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 111/303 (36%), Positives = 175/303 (57%), Gaps = 7/303 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+ + +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVFAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 238 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 296

Query: 299 TQK 301
            Q 
Sbjct: 297 EQA 299


>gi|312622483|ref|YP_004024096.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202950|gb|ADQ46277.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 374

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 22/344 (6%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+ +  V+I   +++  F  +  A                ++  TG ++ E   D     
Sbjct: 1   MKARVFVLIFALIITTAFGKICYANEKKNLPQLSSKSAIAIEWVTGKILFEKNKDLKLPM 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MTA +V              I I   A   P S+   +KG  + + + L  L++
Sbjct: 61  ASTTKIMTAILVLENCDV-----NKEIEIPPQAVGVPGSSMYLEKGEKLKIIDLLYGLML 115

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD---- 169
            S ND AVA+A +     K+FV+ MN  +K+LGLS T F + HG+ Q  HYTTA D    
Sbjct: 116 SSGNDAAVALAIATAGDVKRFVKLMNKKAKDLGLSNTVFSSPHGLEQGQHYTTAHDLAKL 175

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNI 228
            A                 ++        +   N N  +  + GADG+KTGFT  +G  +
Sbjct: 176 TAYAMRNPIFRQIVKTKDIEVPWTTRPYNRILRNKNKMLRLYPGADGVKTGFTKKAGRCL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           V S  + D  +I V+L A D       +  +L+  + N    K +   +     +N  ++
Sbjct: 236 VTSVCRDDFRVICVVLNAPD---MWNDTQKILNYCYNNFKVVKLLPDEMGYVKVKNGKSD 292

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              +            +   ++      +      EK  ++   
Sbjct: 293 WVKVGTTYKCYWVVESSCLPKLDVI--LQVAEAPIEKNKVIGRL 334


>gi|15675077|ref|NP_269251.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes M1 GAS]
 gi|13622233|gb|AAK33972.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes M1 GAS]
          Length = 411

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 149/362 (41%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 2   IKRWVILFFMVLTCSGFGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 61

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 62  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 122 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSALEE 181

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+K
Sbjct: 182 ENMLSAQDVAIVTMHLLEDFPEILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLK 241

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    LI VIL A       NTR + +  LL         RK +
Sbjct: 242 TGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 301

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 302 KKGSLVSERSLPIQDGQVKELPISVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 361

Query: 328 LL 329
           ++
Sbjct: 362 VV 363


>gi|222529271|ref|YP_002573153.1| serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456118|gb|ACM60380.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 372

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 22/344 (6%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+ +  V+I   +++  F  +  A                ++  TG ++ E   D     
Sbjct: 1   MKARVFVLIFALIITTAFGKICYANEKKNLPQLSSKSAIAIEWVTGKILFEKNKDLKLPM 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MTA +V              I I   A   P S+   +KG  + + + L  L++
Sbjct: 61  ASTTKIMTAILVLENCDV-----NKEIEIPPQAVGVPGSSMYLEKGEKLKIIDLLYGLML 115

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD---- 169
            S ND AVA+A +     K+FV+ MN  +K+LGLS T F + HG+ Q  HYTTA D    
Sbjct: 116 SSGNDAAVALAIATAGDVKRFVKLMNKKAKDLGLSNTVFSSPHGLEQGQHYTTAHDLAKL 175

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNI 228
            A                 ++        +   N N  +  + GADG+KTGFT  +G  +
Sbjct: 176 TAYAMRNPIFRQIVKTKDIEVPWTTRPYNRILRNKNKMLRLYPGADGVKTGFTKKAGRCL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           V S  + D  +I V+L A D       +  +L+  + N    K +   +     +N  ++
Sbjct: 236 VTSVCRDDFRVICVVLNAPD---MWNDTQKILNYCYNNFKVVKLLPDEMGYVKVKNGKSD 292

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              +            +   ++      +      EK  ++   
Sbjct: 293 WVKVGTTYKCYWVVESSCLPKLDVI--LQVAEAPIEKNKVIGRL 334


>gi|77464119|ref|YP_353623.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodobacter
           sphaeroides 2.4.1]
 gi|77388537|gb|ABA79722.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 355

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 71/311 (22%), Positives = 127/311 (40%), Gaps = 13/311 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
             T  V+ +     P  PAS++KLMT  ++F  L++ +  + T   +S  A +   S   
Sbjct: 1   MTTHTVLLDKNAHEPLPPASMSKLMTLNMLFEALRDGRVTMETTFAVSTKAKQMGGSKMF 60

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
            ++    T++  +  +IV S ND  V +AE L  TE  F + M   +K LG++ + F N+
Sbjct: 61  VEERDRPTVEELIHGIIVNSGNDACVVVAEGLNGTESDFARAMTVRAKALGMTDSTFTNS 120

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA-------VG 208
            G    GH  +  D+ IL+ R+  +FP++  YF       K +   N N           
Sbjct: 121 SGWPDPGHRMSVHDLGILAVRLIEEFPEFYPYFSHTEFNYKDRVPSNANNRNPLLRLGPN 180

Query: 209 TFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
               ADG+KTG T  +G+ +V SA  +  + ++ V+ G      R +    +++  F   
Sbjct: 181 GDWTADGLKTGHTQEAGYGLVGSAVQKDGRRIVFVLTGLATEADRAQEGEQIVNWAFRQF 240

Query: 268 TDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
             +  +    +    D +  N S      +E+V      ++  +    E           
Sbjct: 241 VQKTLVTKGQRVTEADVWLGNASRVGLVPAEDVKLLVPALVQ-DNVTAEVSYTGPLRAPI 299

Query: 324 EKITLLKNKIT 334
                L   + 
Sbjct: 300 AAGQELAELVI 310


>gi|144901274|emb|CAM78138.1| Predicted peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 425

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 99/234 (42%), Positives = 142/234 (60%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  +G V+ ++    P +PASLTK+MT YV F  L E K  L   +T+S+ A+    
Sbjct: 51  IVVDATSGAVLEQDQAGQPRHPASLTKMMTLYVAFQALSEGKTSLNATLTVSERAAGQGG 110

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    K G T+ L +ALK L+V+SAND AVAIAE +  TE  F Q M   ++ LG++AT 
Sbjct: 111 SVLGLKTGKTIALADALKSLVVRSANDAAVAIAEHVAGTEDSFAQRMTEQARRLGMTATS 170

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           F NA G+   GH TTARDMA+L+  +K DFPQ+   F    +     + P  N  V ++ 
Sbjct: 171 FRNATGLTAPGHLTTARDMAVLAMALKRDFPQHWPLFATTSMRWGSSQLPTVNGFVTSYP 230

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           GA+G+KTGFTC +G+N+ A+A +  +S IAVI+GA  +  R  ++ SLL+  F 
Sbjct: 231 GAEGLKTGFTCPAGYNLAAAASRNGRSAIAVIMGAAAKEQRLALTTSLLNKAFA 284


>gi|254709015|ref|ZP_05170826.1| cobalamin synthesis protein P47K [Brucella pinnipedialis B2/94]
 gi|256030540|ref|ZP_05444154.1| cobalamin synthesis protein P47K [Brucella pinnipedialis M292/94/1]
 gi|256158532|ref|ZP_05456426.1| cobalamin synthesis protein P47K [Brucella ceti M490/95/1]
 gi|265987587|ref|ZP_06100144.1| cobalamin synthesis protein P47K [Brucella pinnipedialis M292/94/1]
 gi|264659784|gb|EEZ30045.1| cobalamin synthesis protein P47K [Brucella pinnipedialis M292/94/1]
          Length = 635

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 112/303 (36%), Positives = 176/303 (58%), Gaps = 7/303 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAA----ANPSIAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V ++ + +C+
Sbjct: 238 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV-DMRKAICS 296

Query: 299 TQK 301
            Q 
Sbjct: 297 EQA 299


>gi|227815684|ref|YP_002815693.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CDC 684]
 gi|254682367|ref|ZP_05146228.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254721249|ref|ZP_05183039.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A1055]
 gi|254733782|ref|ZP_05191496.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740527|ref|ZP_05198218.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254753916|ref|ZP_05205951.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Vollum]
 gi|254759012|ref|ZP_05211039.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Australia 94]
 gi|227004936|gb|ACP14679.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           CDC 684]
          Length = 374

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKEIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 327


>gi|306832771|ref|ZP_07465907.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus bovis ATCC
           700338]
 gi|304425120|gb|EFM28250.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus bovis ATCC
           700338]
          Length = 416

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 132/367 (35%), Gaps = 34/367 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++     A+ +          A         +   ++  TG V+ E     P   AS+T
Sbjct: 5   MKKIFAFFAIFLTFLAVGSKVSADDDFDVSAEHAIAVEATTGKVLYEKDATTPDGIASMT 64

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA- 116
           K++T Y+V+  + E K    T ++IS  A     ++               +L+      
Sbjct: 65  KILTVYLVYKAIDEGKISWDTKVSISDYAYNLTANSDASNVPMEAREYTVEQLVNAAMVA 124

Query: 117 --NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-------------- 160
             N  A+A+AE +  TE KFV  M    +  G++    +NA G+                
Sbjct: 125 SANSAAIALAEQIGGTESKFVDMMKAQLEVWGITDATIVNASGLNNSYLGDNIYPGSSST 184

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGM 216
             +  +ARD+AI++  + T++P  +        +  G      N+ +        G DG+
Sbjct: 185 DENMMSARDVAIIAQHLITEYPDILKITSQTTADFDGTTMNTYNYMLEGMPYERSGVDGL 244

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKK 272
           KTG T  +G + VA++ +    +I+V++ A         R + +  LL     N      
Sbjct: 245 KTGTTELAGASFVATSTENGMRIISVVMNADGWEDDEYARFEATNDLLDYVKSNYEMVTL 304

Query: 273 INYII-----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           +         K       +  V  ++ E     +  IN +     + + + +     K  
Sbjct: 305 VKAGKSYQSSKATVNDGKAKSVAAVASEDLKVVR-RINTDVSADFSTNADGYDAPITKGQ 363

Query: 328 LLKNKIT 334
            +     
Sbjct: 364 KVGTITY 370


>gi|302388530|ref|YP_003824352.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
 gi|302199158|gb|ADL06729.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
          Length = 519

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 82/347 (23%), Positives = 139/347 (40%), Gaps = 33/347 (9%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +++F +  + +  L +     S+A          +     L+D +TG V+      + + 
Sbjct: 5   IKKFSIFFLCLLFLVSSNTETSLAAEDWPSGISVQAQGAILMDADTGTVLWGQNIHNQYF 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALK 109
           PAS+TK+MTA +V          L   +T S NA        SN+   +G  +++ + L 
Sbjct: 65  PASITKVMTALLVIENC-----SLDETVTFSHNAVYNVESGSSNAGINEGDKLSVKDCLY 119

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L++KSAN+ A A+AE +  + + F   MN  +K LG + THF N  G+    HYT+  D
Sbjct: 120 ALLLKSANESANALAEHVAGSTEAFADMMNTRAKELGCTNTHFSNPSGLNNPEHYTSPYD 179

Query: 170 MAILSWRIKTDF-------PQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKT 218
           MA+++     +          Y         +     YP            + G  G KT
Sbjct: 180 MALIARAAFNNPVFGEIDSTTYYKLPPNSINKEGLTIYPGHKMMRKSTPYYYPGIVGGKT 239

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+T  +G  +V  A +    LI +IL           + +LL+ GF N    K       
Sbjct: 240 GYTTLAGNTLVTCAERNGLKLITIILKGSTP-QYWSDTKNLLNFGFDNFVSLKAA----- 293

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           D  +   S         +  T+ E +  +   +    K + F D + 
Sbjct: 294 DHEKTYSSITSDLSFSGLTITKPEALILDPDSRIILPKTASFSDAKP 340


>gi|319767311|ref|YP_004132812.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y412MC52]
 gi|317112177|gb|ADU94669.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y412MC52]
          Length = 460

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 127/322 (39%), Gaps = 23/322 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++ ++G V+           AS+TK+MTA +     K     +   +T+S  
Sbjct: 110 VSAKSAILIEQHSGRVLFAKDAYTKRRIASITKIMTAILAIESGK-----MDDTVTVSAR 164

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S+   ++G  + L + +  L+++S ND AVAIAE +  + + FV  MN  +  +
Sbjct: 165 AVRTEGSSIYLRQGEKIKLRDLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNQKAAEI 224

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-------KGK 198
           G+  T F N HG+    ++ +      L  +      ++      K             +
Sbjct: 225 GMRDTEFANPHGLDDAENHYSTAYDMALLMQYAMKNKEFRRISGTKVYRAPAPPGEDGAR 284

Query: 199 KYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + N N  + + +    G KTG+T  +   +V +A +G   LIAV L A D         
Sbjct: 285 VWRNKNKLLTSLYEYCTGGKTGYTKRAHRTLVTTASKGGIDLIAVTLDAPDD---WNDHI 341

Query: 258 SLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           ++   GF +      +  + ++ I   FY +     V ++   V   ++  +     + +
Sbjct: 342 AMYEYGFSHYHIAKVSSERVVDKISDPFY-RGRLQAVRDLRYPVTDKEESGLQVKVYLLK 400

Query: 313 AKDKESHFIDFEKITLLKNKIT 334
            + KE         T +   + 
Sbjct: 401 PR-KEWKKYPERAPTEVGKAVL 421


>gi|209518827|ref|ZP_03267640.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. H160]
 gi|209500712|gb|EEA00755.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia sp. H160]
          Length = 273

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 9/261 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            L+D  +G ++ E+  D    PASLTKLMTAY+    LK         + ++        
Sbjct: 1   MLVDGESGQILLEHNADAKRQPASLTKLMTAYIALDALKHGSVRWDEKVAVNTADIGEVG 60

Query: 92  ---SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              +      G  + + + ++ LI  SAND A+ +A  +  T   F Q MN+ ++ LG++
Sbjct: 61  GDEARMYLVPGQQVPVRDLVQGLIAASANDAALVLARRVGGTPAGFEQLMNDIARKLGMA 120

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            THF    G+   G+Y+TARD++ L+ R+  DFPQY  +   +       +  N NW +G
Sbjct: 121 HTHFSTPSGITTPGNYSTARDLSTLAMRLTKDFPQYYTFSSEQHFVYGKFEKRNKNWLLG 180

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGD------QSLIAVILGALDRNTRNKVSASLLSM 262
                DGMKTG T A+G+ IVA+A +        + + AVILGA   N R   + SLL+ 
Sbjct: 181 KDPSVDGMKTGHTQAAGYCIVATAKRKQTAPPMMRRVFAVILGAPTANDRITGAGSLLNY 240

Query: 263 GFYNKTDRKKINYIIKDFYQQ 283
            F    D    +        +
Sbjct: 241 AFSAYKDYPLTDDAGHHVVTR 261


>gi|15892459|ref|NP_360173.1| penicillin-binding protein dacF precursor [Rickettsia conorii str.
           Malish 7]
 gi|15619614|gb|AAL03074.1| penicillin-binding protein dacF precursor [Rickettsia conorii str.
           Malish 7]
          Length = 306

 Score =  160 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 139/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+V    A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFVVTFFFAPISEAKKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND+AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDVAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHNPLQQTTARDMAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           ++   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KFYPLFAKTSFVFRGNVVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +          N S  
Sbjct: 250 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKPSIKLASNNKSTT 292


>gi|146296825|ref|YP_001180596.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410401|gb|ABP67405.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 452

 Score =  160 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 84/353 (23%), Positives = 143/353 (40%), Gaps = 32/353 (9%)

Query: 5   LVIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + ++   +L    P  S  E              L++ NTG ++ +  P+    PAS TK
Sbjct: 15  IALLIFLILFIPVPVYSKEESNTLLSDINAKSAILIEANTGQILFQKNPNSRCFPASTTK 74

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSA 116
           ++TA V  S  K     L     +SKNA    P  S+    +G T++  +AL  +++ SA
Sbjct: 75  ILTALVALSKEK----DLDKLFKVSKNAIMIEPGSSSYYLNEGETISFQDALYAMLLISA 130

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A  IAE++  + ++FV+ MN  ++N+G   +HF+N  G+    HYTTA D+++++ +
Sbjct: 131 NDAANVIAENISGSIQEFVKEMNQFAQNIGAKDSHFVNPSGLHNPQHYTTAYDLSLIARQ 190

Query: 177 IKTDFP--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCA 223
              +          +Y         +   +   N N      +   +  A+GMKTG+T  
Sbjct: 191 AYKNETLRKIVSTVEYKITTASMHKKPDWQIIYNINKLLRKNSKYYYPYANGMKTGYTAQ 250

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           +   ++ASA + D  LIAVIL     +     +  LL  GF N    +            
Sbjct: 251 AKRCLIASAKKDDIDLIAVIL---SSDDAFADAIKLLDYGFNNFRKEELFKQNQIIGKVM 307

Query: 284 NLSNEVP----NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                       I       + +  N           +       K T++ N 
Sbjct: 308 VDKVNKKWIDGYIKSSFYVLKNQNTNSEDITYRITFLKDIKPPINKDTVIGNV 360


>gi|288904540|ref|YP_003429761.1| penicillin-binding protein 5 (D-alanyl-D-alanine carboxypeptidase)
           [Streptococcus gallolyticus UCN34]
 gi|325977511|ref|YP_004287227.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731265|emb|CBI12815.1| putative penicillin-binding protein 5 (D-alanyl-D-alanine
           carboxypeptidase) [Streptococcus gallolyticus UCN34]
 gi|325177439|emb|CBZ47483.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
           5/6) [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 412

 Score =  160 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 133/367 (36%), Gaps = 34/367 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++     A+ +          A         +   ++  TG V+ E     P   AS+T
Sbjct: 1   MKKIFAFFAIFLTFLAVGSKVSADDDFDVAAEHAIAVEATTGKVLYEKDATTPDGIASMT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA- 116
           K++T Y+V+  + E K    T ++IS  A +   ++               +L+      
Sbjct: 61  KILTVYLVYKAIDEGKLSWDTKVSISDYAYDLTANSDASNVPMEAREYTVEQLVNAAMVA 120

Query: 117 --NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-------------- 160
             N  A+A+AE +  TE KFV  M    +  G++    +NA G+                
Sbjct: 121 SANSAAIALAEQIGGTESKFVDMMKAQLEEWGITDATIVNASGLNNSYLGDNIYPGSSST 180

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGM 216
             +  +ARD+AI++  + T++P  +        +  G      N+ +        G DG+
Sbjct: 181 DENMMSARDVAIIAQHLITEYPDILKITSQTTADFDGTTMNTYNYMLEGMPYERSGVDGL 240

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKK 272
           KTG T  +G + VA++ +    +I+V++ A         R + +  LL     N      
Sbjct: 241 KTGTTELAGASFVATSTENGMRIISVVMNADGWEDDEYARFEATNDLLDYVKSNYEMVTL 300

Query: 273 INYII-----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           +         K       +  V  ++ E     +  IN +     + + + +     K  
Sbjct: 301 VKAGKSYQSSKATVNDGKAKSVAAVASEDLKVVR-RINTDVSADFSTNADGYDAPITKGQ 359

Query: 328 LLKNKIT 334
            +     
Sbjct: 360 KIGTITY 366


>gi|239947237|ref|ZP_04698990.1| penicillin-binding protein DacF [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921513|gb|EER21537.1| penicillin-binding protein DacF [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 306

 Score =  160 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+     A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFISTFFFAPISEAKKAVKNTPKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFESIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE++  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAENMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KYYPLFAKTSFVFRGNIVNGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +          N S  
Sbjct: 250 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKPSIKLASNNKSTT 292


>gi|222152530|ref|YP_002561705.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus uberis 0140J]
 gi|222113341|emb|CAR40940.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus uberis
           0140J]
          Length = 400

 Score =  160 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 141/362 (38%), Gaps = 32/362 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++  L  I + +       L +A+            ++  TG ++ +   +     ASL
Sbjct: 1   MKKTILSTIIVGLFLWTPSTLVLAQEKLVINAKQAIAVECETGKILYQKEANQKAPIASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TK++T Y+    +K  K    TP+ +S  A      P  ++      T T+   +   +V
Sbjct: 61  TKILTVYLTLKEIKNGKISWDTPVKMSDYAKELANNPDVSNPSLYKDTFTVKELIDSSMV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------V 159
            S+N  A+++AE++  +E +FV  M    +  G+     +NA G+               
Sbjct: 121 VSSNSAAISLAETIAGSEPQFVDMMKKQLQTWGIQDYQLVNASGLNNSMLNGHLYPKSKP 180

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADG 215
              +  +A+++AI++  + ++FP+ +       L        N+N  +        G DG
Sbjct: 181 NDENQLSAKNLAIVASHLISEFPEILAISSQSQLYWGNDVLQNSNHLLPGLSMGRLGVDG 240

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDR- 270
           +KTG T  +G   + +A+Q +  +I VIL A     D   R   +  L    F N     
Sbjct: 241 LKTGTTGCAGQTYIGTAVQDNMRVIVVILHANNAEQDSEARFVEANKLFDFAFQNFQSIT 300

Query: 271 --KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
             K   Y  K         +V  IS +  T  +   + +   K  ++K       EK   
Sbjct: 301 IPKAKPYATKLAIIDGKKKKVAFISHKDFTIVQPKNDDSINYKVIQEKSKTKAPIEKDEK 360

Query: 329 LK 330
           L 
Sbjct: 361 LG 362


>gi|148988291|ref|ZP_01819738.1| penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae SP6-BS73]
 gi|147925972|gb|EDK77046.1| penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase
           [Streptococcus pneumoniae SP6-BS73]
          Length = 406

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 145/360 (40%), Gaps = 31/360 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL+T Y+V+
Sbjct: 1   MLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVY 60

Query: 67  SFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             L+     L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+
Sbjct: 61  EALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIAL 120

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARD 169
           AE +  +EK FV  M       G+     +N  G+                  +  +A D
Sbjct: 121 AEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASG 225
           +AI++  +   +PQ +   +       G    +TN+ +        G DG+KTG T  +G
Sbjct: 181 VAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAG 240

Query: 226 FNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII---- 277
            + V + ++    +I V+L A     +   R   ++SL+       T RK +        
Sbjct: 241 ESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQD 300

Query: 278 --KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                        +    E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 301 SKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYE 360


>gi|306841800|ref|ZP_07474484.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO2]
 gi|306288114|gb|EFM59506.1| D-alanyl-D-alanine carboxypeptidase [Brucella sp. BO2]
          Length = 370

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 2/272 (0%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               + + D ++G ++ ++       PASL K+MT Y+ F  LK  +      + ISKNA
Sbjct: 2   ASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEALKTGRLHWDDALPISKNA 61

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +         K G T++  +A+  +I+ SAND A  + E L  +E  F + M   ++ +G
Sbjct: 62  ASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLAGSEAAFARLMTQRARQIG 121

Query: 147 LSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           + +T F N  G+       TTARDMA+L   ++ DFP+    F  +    +G+ Y   N 
Sbjct: 122 MKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYALFSQRSFTFRGRVYNGHNN 181

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA     R+   A LL+  F 
Sbjct: 182 LMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAGSAGQRDGQMAKLLTR-FG 240

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
              + K    +     Q   + + P++  ++ 
Sbjct: 241 GVDNGKAAPLVAMAKPQAVTAKQKPDVVADLI 272


>gi|118590830|ref|ZP_01548230.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family protein [Stappia
           aggregata IAM 12614]
 gi|118436352|gb|EAV42993.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family protein [Stappia
           aggregata IAM 12614]
          Length = 295

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 91/251 (36%), Positives = 145/251 (57%), Gaps = 3/251 (1%)

Query: 14  SNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           +   P ++ A    +       +L+ +TG  +     D P  PASL+K+MT Y++F  + 
Sbjct: 42  AAPLPAVAYAPETAVERGFSALVLNASTGEELYAVDADAPRYPASLSKMMTLYLLFEAVS 101

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           E +  L+TP+++S  A+  PP+    K GST+T++ A + L VKSAND+A+ +AE+L  +
Sbjct: 102 EGRYSLSTPLSVSAKAASEPPAKIGLKAGSTITVEEAARALAVKSANDVAIVVAENLAGS 161

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E  F + M + ++ LGLS T F+NA G+      ++ARDMA+L   +K  FPQY  Y++ 
Sbjct: 162 EAAFARQMTSQARALGLSRTRFVNATGLPDPAQVSSARDMAVLGLTLKRRFPQYASYYRA 221

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           K     G+ +  TN  VG   G DG+KTG+   SG+N+VA+A +G + LI V++G     
Sbjct: 222 KSFSYNGRTFRATNNLVGKVAGVDGLKTGYIRMSGYNLVATANRGGKRLIVVVMGGASEA 281

Query: 251 TRNKVSASLLS 261
            R+K    L+ 
Sbjct: 282 ARDKEVTRLIE 292


>gi|148559912|ref|YP_001259847.1| D-alanyl-D-alanine carboxypeptidase [Brucella ovis ATCC 25840]
 gi|148371169|gb|ABQ61148.1| D-alanyl-D-alanine carboxypeptidase [Brucella ovis ATCC 25840]
          Length = 352

 Score =  160 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 112/316 (35%), Positives = 182/316 (57%), Gaps = 7/316 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                   +D  TG V  +      W PASLTK+MTAYV F  L+  +  L +P+ ++ N
Sbjct: 4   AAANPSIAVDVATGKVYEQQDAFQRWYPASLTKMMTAYVTFRALQSGQMTLESPVRMTVN 63

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           AS+ PPS   +K GS MTLD AL +++VKSAND++VA+AE++  TE  FVQ MN  ++ L
Sbjct: 64  ASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVSVAVAEAVGGTEAAFVQRMNAEARRL 123

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NT 203
           G+  +HF N +G+    +YTTARD+A+L+ +++ +FPQY HYF  + ++    K    N 
Sbjct: 124 GMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRREFPQYAHYFATEAIDPGAGKKVEANY 183

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +G + GADGMKTGF CASGFN+  SA +  ++++A++LGA  + TR   +A +++  
Sbjct: 184 NILLGRYDGADGMKTGFVCASGFNLAGSATRNGRTVLAIVLGADRQETRAIQAAQMMTDA 243

Query: 264 FYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK----ESH 319
           F  ++        +      NL+  V ++ + +C+ Q     ++ +  E + K      H
Sbjct: 244 FRARSSGGPTLATLHPAQTANLNQAV-DMRKAICSEQAMADRWDGREVEGRLKINSPYIH 302

Query: 320 FIDFEKITLLKNKITK 335
            +D + I +    +++
Sbjct: 303 AMDHDPIAVQVRLVSE 318


>gi|228914143|ref|ZP_04077761.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228932855|ref|ZP_04095722.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945169|ref|ZP_04107525.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228814404|gb|EEM60669.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228826776|gb|EEM72543.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228845476|gb|EEM90509.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 378

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 5   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 296 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 331


>gi|196036818|ref|ZP_03104207.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|196047629|ref|ZP_03114836.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
 gi|218902679|ref|YP_002450513.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|225863432|ref|YP_002748810.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB102]
 gi|301053108|ref|YP_003791319.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis CI]
 gi|195990547|gb|EDX54526.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|196021543|gb|EDX60243.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
 gi|218536387|gb|ACK88785.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|225788779|gb|ACO28996.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 03BB102]
 gi|300375277|gb|ADK04181.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 374

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 327


>gi|323164088|gb|EFZ49896.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella sonnei 53G]
 gi|332761340|gb|EGJ91626.1| D-alanyl-D-alanine carboxypeptidase dacC [Shigella flexneri
           2747-71]
          Length = 284

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 16/274 (5%)

Query: 1   MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++  +  A+                  +          Y L+D N+G V+AE   D   
Sbjct: 10  MKRLALTTALCTAFISAAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRR 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLD 105
           +PASLTK+MT+YV+   +K  K   T  +TI  +A                K G  + + 
Sbjct: 70  DPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVS 129

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y+
Sbjct: 130 QLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYS 189

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCAS 224
           +ARDMA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +
Sbjct: 190 SARDMALIGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKA 249

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           G+N+VASA +G   LI+ ++G      R   S +
Sbjct: 250 GYNLVASATEGQMRLISAVMGGRTFKGREAESKN 283


>gi|329116584|ref|ZP_08245301.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus parauberis
           NCFD 2020]
 gi|326906989|gb|EGE53903.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus parauberis
           NCFD 2020]
          Length = 406

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 143/362 (39%), Gaps = 31/362 (8%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPY--YTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ +  +I+  ++L         A            ++++TG ++ E   +     ASL
Sbjct: 1   MKKLIVKLILTTSLLVTFSAQTVFAADFSADSRHAIAVESDTGKILYEKSGNKKAPIASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TKL+T Y+    +K  K      + +S+ A      P  ++      T ++   +   ++
Sbjct: 61  TKLLTIYITLKEIKAGKISWNDQVKLSEYAQSLATDPEISNPPLTSDTYSVKELVDSSLI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ------------- 160
            SAN  A+A+AE +  +E KFV  M    +  G++    +++ G+               
Sbjct: 121 VSANSSAIALAEYIAGSEPKFVDMMKKQVEQWGITDYLLVDSSGLPNSLLKGHTYPGSSP 180

Query: 161 -HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADG 215
              +  +A+ +AI+++ +  DFP+ +       +    +   ++N+ +        G DG
Sbjct: 181 KDENMLSAKSLAIIAYHLIHDFPEVLQITSQPQMIWGYETLYSSNYLLPGQEMGRAGVDG 240

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRK 271
           +KTG T  +G   +A+A + +  LI V+L A     D   R   +  LL   F N   + 
Sbjct: 241 LKTGTTNLAGQTYIATATENNMRLITVLLHANHTKEDHYARFTQTNQLLDYCFQNYQKKL 300

Query: 272 KINYIIK-DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA-KDKESHFIDFEKITLL 329
            +             + +   IS +  T    I   NT  K + K K       +K   +
Sbjct: 301 MVKKDQPLPNRIAVENGKKDKISIKTKTNIYAIHKINTAPKLSFKSKNKLVAPIKKNQFI 360

Query: 330 KN 331
             
Sbjct: 361 GT 362


>gi|49481056|ref|YP_035686.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332612|gb|AAT63258.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 374

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  KI  
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKIGK 327


>gi|49474221|ref|YP_032263.1| penicillin-binding protein [Bartonella quintana str. Toulouse]
 gi|49239725|emb|CAF26104.1| Penicillin-binding protein [Bartonella quintana str. Toulouse]
          Length = 387

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 82/349 (23%), Positives = 145/349 (41%), Gaps = 13/349 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR  L I+       I      +           LLD +T  ++ E   D P+ PASL K
Sbjct: 1   MRTTLRILFTLFWMLILDGWGRAQDFQTSASQLLLLDNDTDTILFEKQSDIPFFPASLVK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIV 113
           LMTA VVF  LK+     T    +S+NA          +    K  + +++ + L+ LI+
Sbjct: 61  LMTAEVVFYQLKQGLLSSTQTFEVSENAWRKGGAPSGTTTMFAKVKTKISVSDLLRGLII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            + ND A+ +AE +  +E  F + MN  ++ LGLS +HF+N  G+ + G   T RDM +L
Sbjct: 121 VNGNDAAITLAEGISGSEADFAKLMNQRARTLGLSHSHFVNPTGLSEEGQLVTLRDMIVL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I   +P Y   +             N N  +   +G +G   G++   GF++V +A 
Sbjct: 181 ARHIAHTYPNYYALYSEPNFTWNKIFQRNKNPLISKEMGVEGFAFGYSEKEGFSMVVAAY 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEV 289
           +  + L   I G  D     K    +L  G      +              Y    ++  
Sbjct: 241 KNHRRLFLAINGLQDGKGHTKEIERILQWGMTAFDLKTIFIKGETVGHASVYGGTQNSVP 300

Query: 290 PNISEEVC--TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + E +    + ++ +N   ++K     ++  +  + + +++    KK
Sbjct: 301 LIVKEPISFMLSNEKKMNVKAKIKHRGPLKAPIVLGQPVGVIQILEDKK 349


>gi|315222027|ref|ZP_07863938.1| beta-lactamase [Streptococcus anginosus F0211]
 gi|315188993|gb|EFU22697.1| beta-lactamase [Streptococcus anginosus F0211]
          Length = 413

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 149/366 (40%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++F++ +   +L  + P + +        +   +D  TG ++ E   + P   AS+TKL
Sbjct: 1   MKKFIITLVTTLLIFLAPTVLADNFEVGAKHAIAVDVATGKILYEKDANQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  + + K  L T + IS    +    P +++   +    T++  L+  ++ SA
Sbjct: 61  LTAYLVYEAIHQGKFTLQTSVDISDYPYQLTVNPDASNVPLEARKYTVEELLETSLIASA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---------------H 161
           N  A+A+AE +  +EKKFV  M    +  G+     +NA G+                  
Sbjct: 121 NSPAIALAEKVAGSEKKFVDLMKAKLQQWGIKDATIVNASGLNNSVLGEEHIYPGSGKED 180

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMK 217
            +  +A D+AI++ R+  D+P+ +   Q       G    ++N  +        G DG K
Sbjct: 181 ENKMSAHDVAIIARRLILDYPEVLEITQKATSNFAGMTLTSSNHMLKNMPAFRAGVDGFK 240

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           TG +   G + V +  Q    LI V+L       D N R   ++  ++  +   T +  +
Sbjct: 241 TGTSDKGGSSFVGTIQQRGMRLITVLLNVNHADEDENARFTATSRFMTYIYQQFTVQTIV 300

Query: 274 NYIIK-----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             +EV  ++ +  T  +   +    +    DK  +    +K  +
Sbjct: 301 KKGEAYNKSSARVINGKKDEVTAVASKKLTIVRRYNHKKPTVHFTTDKNGYPTPLKKGVV 360

Query: 329 LKNKIT 334
           +     
Sbjct: 361 VGKLTY 366


>gi|218289386|ref|ZP_03493620.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240492|gb|EED07673.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 456

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 10/292 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            +       ++D +TG V+   +P     PAS+TK+MT     + L  +   LT  +T S
Sbjct: 67  PSIVSQAAVVMDMDTGAVVYAKHPTALHYPASITKIMT-----ALLALRLGRLTDVLTAS 121

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +A   PP     + G   TL + L  L++ SAND AV IAE    +   F   MN  ++
Sbjct: 122 PDAVRQPPDKLYMRVGEKATLKDLLYGLLIDSANDAAVEIAERYGGSVAHFADMMNAEAR 181

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK----GKK 199
            LG + THF+N  G+    H TTA DMA+++       P++      +  E K       
Sbjct: 182 ALGATHTHFVNPSGLPDPRHVTTAYDMAVIAR-AAMQIPEFRTIVDTRSYEWKGTAWQAT 240

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N  + T+ GA G+KTGFT  +   +V +A +G  + +AV++         + + +L
Sbjct: 241 LTNLNRMLFTYPGAIGVKTGFTSVAHETLVVAATRGGTTFLAVLMDCPTDAEIRQDATNL 300

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           L+  F +   ++ +    +  +      + P ++ E       I +    ++
Sbjct: 301 LNYAFSHYETQRILPAGYRAGFVMARDGQDPVVTAEPVLATVPIDHPLDVIE 352


>gi|320547987|ref|ZP_08042268.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus equinus
           ATCC 9812]
 gi|320447333|gb|EFW88095.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus equinus
           ATCC 9812]
          Length = 419

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 128/361 (35%), Gaps = 31/361 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ +  +A+ +        +        +   ++  TG V+ E     P   AS+TK++
Sbjct: 11  MKKVIAALAILLAFIGSSVYADDFDVAAKHAIAVEATTGKVLYEKDATTPAGIASMTKIL 70

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA---N 117
           T Y+ +  +        T + IS  A +   ++               +L+        N
Sbjct: 71  TVYLTYKEIDNGNLSWDTKVPISDYAYDLTANSDASNVPMEAHEYTVEQLVNAAMVASAN 130

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGH 163
             A+A+AE +  +E  FV  M       G++    +NA G+                  +
Sbjct: 131 SAAIALAEQIGGSESNFVDMMKAQLNEWGITDAKLVNASGLNNSYLSDNIYPESSSTDEN 190

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
             +ARD+AI++  + T++P  +        +  G      N+ +        G DG+KTG
Sbjct: 191 MLSARDIAIIARHLITEYPDVLKISSQTTADFDGSTMNTYNYMLKDMPYERDGVDGLKTG 250

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINY 275
            T  +G + VA++ +    +I+V++ A         R + +  LL     N      I  
Sbjct: 251 TTELAGASFVATSTENGMRIISVVMNADGWEENDFARFEATNELLDYVKSNYEITTIIEA 310

Query: 276 II-----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                  K   +      VP ++ +        I  +   K +   + +     K   + 
Sbjct: 311 GQSYKNSKAKVKDGKEKTVPVVAAQDLNVV-HRIGTDVSAKFSSKAKGYEATINKGDKVG 369

Query: 331 N 331
            
Sbjct: 370 K 370


>gi|225574472|ref|ZP_03783082.1| hypothetical protein RUMHYD_02547 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038322|gb|EEG48568.1| hypothetical protein RUMHYD_02547 [Blautia hydrogenotrophica DSM
           10507]
          Length = 396

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 136/341 (39%), Gaps = 14/341 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A A+ +N                 L++  TG ++ +   D    PAS TK+MTA VV 
Sbjct: 13  VLAAAITTNSIAGWPQGPEIVDETGVLMEAETGTILYDKGMDQRMYPASTTKIMTALVVL 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
              ++ +  +T   T +K  +    +N   + G  +T++  L   ++ SAN+++  +AE 
Sbjct: 73  ENTEDLQTKITFTETGTKEVTP-DSANIQAQLGEELTVEQCLYASLLASANEVSSQLAEF 131

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP---- 182
           +  T++ FV+ MN  ++ LG S THF N +G+    HYTTA D+A++      +      
Sbjct: 132 VGGTKEHFVEMMNLKAQELGCSDTHFTNPNGLPDENHYTTAHDLALIMQAAIQNETFREI 191

Query: 183 --QYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQG 235
                +           +   N +          + GA   KTG T A+   +V +A + 
Sbjct: 192 ESTQTYTIPATNKTATPRNLTNHHAMLVSGNPSYYEGAFAGKTGHTDAAKDTLVTAAEKN 251

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
             +LI V+L + +       + +L + GF                    +  +     ++
Sbjct: 252 GMTLICVVLKSDNGQV-VADTINLFNYGFEQFQRLPMTEKDETKSGGYAIVPKNI-TKDQ 309

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           V   +        Q    ++ +      EK+T       +K
Sbjct: 310 VQVQENADGELIQQTYTWQNVQVGSAAVEKVTPTPTPQPEK 350


>gi|332981601|ref|YP_004463042.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mahella australiensis
           50-1 BON]
 gi|332699279|gb|AEE96220.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mahella australiensis
           50-1 BON]
          Length = 439

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 137/370 (37%), Gaps = 43/370 (11%)

Query: 1   MRQFLVIIAMAMLSNIF---------------------PFLSIAETNKLPYYTLLDTNTG 39
           M++ L++I M +L  +                        +            L+D  TG
Sbjct: 1   MKKKLLVIPMLILYILALAAYIPVAYAEPTSNDTLADDATVLSPPAVSAKNLILIDAKTG 60

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP---SNSTF 96
           + +    PD    PAS+TK++TA +           L   +TI + AS   P   S    
Sbjct: 61  NALYSINPDQKAYPASITKILTAAIALEQ-----GNLKDVVTIDEEASLGIPAGSSAIVM 115

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
            KG   TL+  L  L++ S ND AVAIA+ +  T  +FV  MN  +K  G   +HF N H
Sbjct: 116 DKGEQFTLEQLLYGLMLISGNDAAVAIAKHISGTTDEFVNLMNQKAKEWGAKNSHFANPH 175

Query: 157 GVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI------KGLEIKGKKYPNTNWA---- 206
           G     HYTTA DMA+++    T                 K L    +++ N N+     
Sbjct: 176 GFHNDNHYTTAYDMAMIARHAMTIPKFRDIVSTTLYLDIPKTLRGDQRRWDNINFFVQPN 235

Query: 207 -VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               + GA G+KTG+T  +   +VASA      LIAV++G   +    K +A+L+  GF 
Sbjct: 236 SKYYYKGATGIKTGYTNQAHHTLVASAQHNGTELIAVLMGEPSKPVAWKDAAALMDYGFN 295

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVC---TTQKEIINYNTQMKEAKDKESHFID 322
               +               +       E V                        S    
Sbjct: 296 AFARKIIATKGTPLGTVNITNGSTSESIEAVLDRDIDVMVPKVSEIIQPSVHLPSSITAP 355

Query: 323 FEKITLLKNK 332
            ++  ++ + 
Sbjct: 356 IKEGDVVGSV 365


>gi|228926600|ref|ZP_04089669.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832976|gb|EEM78544.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 378

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 5   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 296 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 331


>gi|223983850|ref|ZP_03634014.1| hypothetical protein HOLDEFILI_01295 [Holdemania filiformis DSM
           12042]
 gi|223964174|gb|EEF68522.1| hypothetical protein HOLDEFILI_01295 [Holdemania filiformis DSM
           12042]
          Length = 412

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 78/340 (22%), Positives = 140/340 (41%), Gaps = 17/340 (5%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+++      + +A+ M+  +                L+D ++G V+ E   D    PAS
Sbjct: 1   MKKWFKGLAALALAINMMPALSIKAEEELNLDGESAVLIDADSGAVLYEKNADDRHYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT Y+  S     + +  T   I  +  +   S+     G  ++L +A    I+ S
Sbjct: 61  ITKIMTVYLALSQGNPDQMLTATDTAI--DNIDRKSSHIWLDYGEELSLKDACYAAIMAS 118

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND +  +AE++  ++++F   MN  +   G   THF NAHG+    HYTTA DMA+++ 
Sbjct: 119 ANDASNVLAEAIGGSQEEFAGLMNEAAAAAGAKNTHFANAHGLPDEDHYTTAYDMAMITR 178

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYP----------NTNWAVGTFLGADGMKTGFTCASG 225
               +      +  +K       K                    +  A G K G+T  +G
Sbjct: 179 MAMKNAAFAEVFGTVKYEMQPTNKQKDVRYFASGNDMLKKGEFFYEYATGGKIGWTEDAG 238

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
           + IV +A +   +LIAV+L   ++N R   + +L   GF N           ++   +  
Sbjct: 239 YTIVTTASKDGVNLIAVVLKNSNKNARYTDTRALFDYGFANYKQITIPASSFEEKTIEIK 298

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                  + +   +    I   T   E++   S  ++ EK
Sbjct: 299 KRGQLWATAKFKMSYDFKILAKTNDDESQYTASVIVENEK 338


>gi|23501950|ref|NP_698077.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|161619022|ref|YP_001592909.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|254704362|ref|ZP_05166190.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|260566392|ref|ZP_05836862.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|261755034|ref|ZP_05998743.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
 gi|23347896|gb|AAN29992.1| D-alanyl-D-alanine carboxypeptidase [Brucella suis 1330]
 gi|161335833|gb|ABX62138.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella canis ATCC
           23365]
 gi|260155910|gb|EEW90990.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella suis bv. 4 str. 40]
 gi|261744787|gb|EEY32713.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis bv. 3 str.
           686]
          Length = 410

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A +      L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVVFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   +   P++  ++ 
Sbjct: 264 SAGQRDGQKAKLLTR-FGGVDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 312


>gi|312135096|ref|YP_004002434.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           owensensis OL]
 gi|311775147|gb|ADQ04634.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           owensensis OL]
          Length = 382

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 82/339 (24%), Positives = 133/339 (39%), Gaps = 21/339 (6%)

Query: 2   RQFLVIIAMAM----LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           R F++I+ M +        +                ++  TG ++     D     AS T
Sbjct: 11  RVFVLILLMIVNTEVAVTCYASEKNLPQVSSKSAIAIEWMTGKILFRKNEDLKLPMASTT 70

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA +V              I I   A     S+   +KG  + + + L  L++ S N
Sbjct: 71  KIMTAILVLENCDV-----NKEIEIPPQAVGVQGSSMYLEKGEKLKIIDLLYGLMLSSGN 125

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAIL 173
           D AVA+A       KKFV  MN  +K LGLS T F + HG+ Q  HYTTA D     A  
Sbjct: 126 DAAVALAIVTAGDVKKFVNLMNKKAKELGLSNTVFSSPHGLEQGQHYTTAHDLALLTAYA 185

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
                          ++        +   N N  +  + GA+G+KTGFT  +G  +V SA
Sbjct: 186 MKNPIFRQIVKTTEKEVPWTTRPYNRILRNKNKMLRLYPGAEGVKTGFTKKAGRCLVTSA 245

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            + D  +I V+L A D       +  +L   + N    K + +   +     ++N     
Sbjct: 246 CRDDFRVICVVLNAQD---MWNDTRKILDYSYRNF---KVLKFPPGEIGYVKVNNGKMGW 299

Query: 293 SEEVCTTQKE-IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +   T QK  +++ +   +     +      EK  ++ 
Sbjct: 300 VKVGTTHQKYWVVDSDCFPRIDVLIQPLDAPVEKNKVIG 338


>gi|163843338|ref|YP_001627742.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
 gi|163674061|gb|ABY38172.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brucella suis ATCC 23445]
          Length = 410

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 81/290 (27%), Positives = 138/290 (47%), Gaps = 2/290 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A +      L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVVFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F  +    +G+ Y   N  +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA 
Sbjct: 204 FSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAG 263

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
               R+   A LL+  F    + K    +     Q   +   P++  ++ 
Sbjct: 264 SAGQRDGQKAKLLTR-FGGVDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 312


>gi|302871919|ref|YP_003840555.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574778|gb|ADL42569.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 373

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 80/333 (24%), Positives = 132/333 (39%), Gaps = 15/333 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            FL+I++  +    +                ++  TG ++ +   D     AS TK+MTA
Sbjct: 9   IFLLIVSTELAKICYANEKNLPQVSSKSAIAIEWMTGKILFKKNEDLKLPMASTTKIMTA 68

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +V              I I   A   P S+   +KG  + + + L  L++ S ND AVA
Sbjct: 69  ILVLENCDV-----NKEIEIPPQAVGVPGSSMYLEKGEKLKIIDLLYGLMLSSGNDAAVA 123

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIK 178
           +A       KKFV  MN  +K LGLS T F + HG+ Q  HYTTA D     A       
Sbjct: 124 LAIVTAGDVKKFVNLMNKKAKELGLSNTVFSSPHGLEQGQHYTTAHDLALLTAYAMKNPI 183

Query: 179 TDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                     ++        +   N N  +  + GA+G+KTGFT  +G  +V SA + D 
Sbjct: 184 FRQIVKTTEKEVPWTTRPYNRILRNKNKMLRLYPGAEGVKTGFTKKAGRCLVTSACRDDF 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
            +I V+L A D       +  +L   + N    K      +  Y +  + ++  +     
Sbjct: 244 RVICVVLNAQD---MWNDTRKILDYSYRNFKVLKL--PPGEIGYVKVNNGKMGWVKVGTT 298

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +  +++ +   K     +      EK  ++ 
Sbjct: 299 HQKYWVVDSDCFPKIDMLMQPLDAPVEKNKVIG 331


>gi|332654087|ref|ZP_08419831.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcaceae bacterium
           D16]
 gi|332517173|gb|EGJ46778.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcaceae bacterium
           D16]
          Length = 453

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 80/372 (21%), Positives = 134/372 (36%), Gaps = 38/372 (10%)

Query: 1   MRQ-------FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++        +V I   +L                   L+D N   V+ E        P
Sbjct: 1   MKKYRLFALVLVVSIMTTLLLPFQSLALEPPEFHGKNAILVDANYDEVLYEVGGHDKVYP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFKKGSTMTLDNALKLL 111
           AS+TK+MTA +    ++  K    T +T S          S +  K G  +T++  L  L
Sbjct: 61  ASITKVMTALLTLEAIESGKLTAQTQVTASATAATIPEGSSTANIKAGEVLTVEQLLYCL 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAN+ A  +AE++      FV  MN+ +K LG   THF N HG     HYTT  D+ 
Sbjct: 121 LLPSANEAAQILAETVGGDIDTFVGMMNDKAKELGCENTHFANPHGFHDPDHYTTPYDIT 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKY-------------PNTNWAVGTFLGADGMKT 218
           +       ++  +          I                   N  +    +    G KT
Sbjct: 181 LFMK-AAMEYDLFQKIVTSPNYTIPATNLSEQRTVRNTNALTSNWTYTGYLYTPGTGGKT 239

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNT---------RNKVSASLLSMGFYNKTD 269
           G T  +G  +V +A +GD  LI+V++G  ++ T         +   +  LL+ GF N   
Sbjct: 240 GSTDEAGKCLVETAKKGDTYLISVVMGEPEKVTLADGTEVVAQFYDTIQLLNWGFENFQR 299

Query: 270 RKKINYIIKDFYQQNLSNEVPN-----ISEEVCTTQKEIINYNTQMKEAKD-KESHFIDF 323
                            +   +      S  +  T  + +N +   K      ++     
Sbjct: 300 TVISEDSEVVAKVNVTLSTQSDQVMVRPSGSIARTLPKDVNVDEMEKVINLFNDTVEAPV 359

Query: 324 EKITLLKNKITK 335
           E+  +L   + K
Sbjct: 360 EQGQVLGTMVLK 371


>gi|311028943|ref|ZP_07707033.1| D-alanyl-D-alanine carboxypeptidase dacA [Bacillus sp. m3-13]
          Length = 459

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 77/398 (19%), Positives = 152/398 (38%), Gaps = 64/398 (16%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDH 49
           M++     F+ ++ + ++ +IFP  S                 L++ +TG +I +   D 
Sbjct: 1   MKRSFKQLFVGLLVLTLMVSIFPGKSAQAEENDFLNINAKAAILIEFSTGKIIYQKNVDE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-----NSTFKKGSTMTL 104
               AS+TK+MT Y++   +++ K   +  + +S  A           N   +K    T+
Sbjct: 61  ALPVASMTKMMTEYLLLEAIEDGKLDWSKEVILSDYAQAISQKYPELSNVPMRKQEPYTI 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
               + + + SAN   +A+AE++  +E KFV+ MN  ++ +GL   +F+N+ G+      
Sbjct: 121 KELYEAMAIYSANGATIALAEAIAGSETKFVEMMNAKAEEIGLENYNFVNSTGLNNEDLA 180

Query: 159 ------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YP 201
                              +A+D A L+ R+ TD+P+ +    I     +         P
Sbjct: 181 VGGVPMHPEGTDANEETTLSAKDTARLAHRLLTDYPEILDTASIPFKVFREGTPDAIDMP 240

Query: 202 NTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----- 250
           N N           F G DG+KTG T A+GFN   +A +    +I+V++   +       
Sbjct: 241 NWNKMLFTEELKVQFEGIDGLKTGSTDAAGFNFTGTAERDGMRVISVVMNTTNDEGVSTE 300

Query: 251 -TRNKVSASLLSMGFYNKTDRKKI-------NYIIKDFYQQNLSNEVPNISEEVCTTQK- 301
            +R   +  L++  F + +  +            I    +    +      E   T  K 
Sbjct: 301 ISRFIETKKLMTHAFGSYSVEELFPGEYQMEGESILPVTKGKEDSVEIQTKEPFKTLVKD 360

Query: 302 -EIINYNTQMKEAKDKESHF----IDFEKITLLKNKIT 334
               N+  Q +  +   +         ++   +     
Sbjct: 361 GNKDNFKPQFEINEKLLNEEGELTAPVKEGDSVGVMTV 398


>gi|332076153|gb|EGI86619.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           GA41301]
          Length = 406

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 144/360 (40%), Gaps = 31/360 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL+T Y+V+
Sbjct: 1   MLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVY 60

Query: 67  SFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             L+     L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+
Sbjct: 61  EALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIAL 120

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARD 169
           AE +  +EK FV  M       G+     +N  G+                  +  +A D
Sbjct: 121 AEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASG 225
           +AI++  +   +PQ +   +       G    +TN+ +        G DG+KTG T  +G
Sbjct: 181 VAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAG 240

Query: 226 FNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII---- 277
            + V + ++    +I V+L A     +   R   ++SL+       T RK +        
Sbjct: 241 ESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQD 300

Query: 278 --KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                             E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 301 SKTPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYE 360


>gi|240850634|ref|YP_002972034.1| penicillin-binding protein [Bartonella grahamii as4aup]
 gi|240267757|gb|ACS51345.1| penicillin-binding protein [Bartonella grahamii as4aup]
          Length = 387

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 80/343 (23%), Positives = 147/343 (42%), Gaps = 11/343 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++    +L+      +           LLD +TG ++ E   D P+ PASL KLMT  V
Sbjct: 7   ILLTLWGILAFDTWGRAEGFQISASQLLLLDDDTGTILYEKQSDIPFFPASLAKLMTVEV 66

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  LKE     T    +S+NA          +    K  + +++ + L+ LI+ + ND 
Sbjct: 67  VFHHLKEGLLKSTQKFKVSENAWRKGGAPSGTTTMFAKIKTEISVSDLLRGLIIMNGNDA 126

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ +AE +   E  F + MN  +K +GLS +HF+NA G+ + G + T RDM IL+  I  
Sbjct: 127 AIILAEGISGHEAHFAKLMNQRAKIVGLSQSHFVNATGLPEEGQFVTVRDMIILARHIVQ 186

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           ++P Y   ++            N N  +   +G +G   G++   GF++VA+  +  + L
Sbjct: 187 EYPDYYALYREPHFTWNNIFQRNKNPLISKEIGVEGFGFGYSGKEGFSMVATISKNHRRL 246

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEE 295
              I G  D     K    +L  G      +              Y    +     + + 
Sbjct: 247 FLAINGLQDGKKYTKEIERILQWGMTAFDLKTIFTKEEAVGRASVYGGTQNFVPLIVKKP 306

Query: 296 VC--TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +    + ++ +N   ++K     ++  +  + + +++    KK
Sbjct: 307 ISFMLSNEKKVNVKAKIKYHGPLKAPIVSGQSVGVIQILEDKK 349


>gi|118477025|ref|YP_894176.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416250|gb|ABK84669.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
          Length = 386

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 13  MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 72

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 73  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 127

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 128 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 188 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 246

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 247 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 303

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 304 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 339


>gi|85708665|ref|ZP_01039731.1| D-alanyl-D-alanine carboxypeptidase [Erythrobacter sp. NAP1]
 gi|85690199|gb|EAQ30202.1| D-alanyl-D-alanine carboxypeptidase [Erythrobacter sp. NAP1]
          Length = 403

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 124/324 (38%), Gaps = 8/324 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +    +LP   L+D  +G V+     D  + PAS+TK+MT +  F  ++E       
Sbjct: 44  PAPVPAQTELPIALLVDVTSGQVLYSRNADRRFVPASITKVMTLFHAFELIEEGDLDPRQ 103

Query: 79  PITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
            + +S    E      S      G  + +D+ L  +   SAND +  +AE    +   ++
Sbjct: 104 TLVMSDEVWEEWGGEGSTMWINAGDRVAVDDLLTGIANISANDGSAMLAEGQAGSISAWL 163

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGH-YTTARDMAILSWRIKTDFPQYM-HYFQIKGL 193
             MN  +++L +  +HF   +G    G  +TTA D+  L+  + +  PQ    Y    G 
Sbjct: 164 DGMNQRARSLEMVNSHFGTPNGWPDEGRTFTTASDLVKLAQALISRHPQKYARYIGKPGF 223

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                +  N +  +G   GADG+KTG+T  SG   V SA +  Q L+ V+ G    + R 
Sbjct: 224 RYNDIEQFNRDPMIGRVAGADGIKTGYTNESGLGYVGSAKRDGQRLVVVVAGISRGSIRA 283

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           + +  L+  GF      +             Q   S  V   +E            +   
Sbjct: 284 RAARDLIEWGFDAFDRERLYANGEVVARARVQGGNSRSVALQTERDVFVNVPKGRLSELS 343

Query: 311 KEAKDKESHFIDFEKITLLKNKIT 334
              +        F+    +   + 
Sbjct: 344 LRVEYDGPLRAPFDSGDHVATLVV 367


>gi|319654383|ref|ZP_08008470.1| hypothetical protein HMPREF1013_05090 [Bacillus sp. 2_A_57_CT2]
 gi|317393882|gb|EFV74633.1| hypothetical protein HMPREF1013_05090 [Bacillus sp. 2_A_57_CT2]
          Length = 389

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 79/283 (27%), Positives = 124/283 (43%), Gaps = 15/283 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M+Q +V+I +A L + F     A            L+D NTG ++ E        PASLT
Sbjct: 1   MKQVIVLIFIASLFSGFQKTIHASDSPVVSSGSAILIDANTGEILFEKKATEEMYPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+ TA             L   ++I  N  +   +    ++G  ++L   ++ L++ S N
Sbjct: 61  KIATAIYAIEK-----GNLNDIVSIGSNPRKIEGTRVYLEEGERVSLRKLIQGLLINSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  VAIAE +  + + F +++N+    LGL  T FMN HG+    H TTA D+A L+   
Sbjct: 116 DAGVAIAEHMDGSIETFSKNLNSYLAGLGLKNTVFMNPHGLFNPEHVTTAEDLATLTQY- 174

Query: 178 KTDFPQYMHYFQIKGLEIKGKKY------PNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
             +  ++   F  K LE KG  +       +       + G  G KTG+   SG  +V +
Sbjct: 175 AMENQEFSEIFGTKELEWKGATWKTTLYTHHKLMRELPYEGVIGGKTGYVDQSGHTLVTA 234

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           A + + SLI V L A  +      +  LL  GF +        
Sbjct: 235 AKRKELSLIVVTLNASSQELAYDDTKKLLDYGFNHYKTSSIAK 277


>gi|111657944|ref|ZP_01408652.1| hypothetical protein SpneT_02000863 [Streptococcus pneumoniae
           TIGR4]
 gi|149007183|ref|ZP_01830847.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP18-BS74]
 gi|147761221|gb|EDK68188.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP18-BS74]
          Length = 406

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 144/360 (40%), Gaps = 31/360 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL+T Y+V+
Sbjct: 1   MLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVY 60

Query: 67  SFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             L+     L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+
Sbjct: 61  EALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIAL 120

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARD 169
           AE +  +EK FV  M       G+     +N  G+                  +  +A D
Sbjct: 121 AEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASG 225
           +AI++  +   +PQ +   +       G    +TN+ +        G DG+KTG T  +G
Sbjct: 181 VAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAG 240

Query: 226 FNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII---- 277
            + V + ++    +I V+L A     +   R   ++SL+       T RK +        
Sbjct: 241 ESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQD 300

Query: 278 --KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                             E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 301 SKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYE 360


>gi|15895327|ref|NP_348676.1| D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025043|gb|AAK80016.1|AE007708_12 D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum
           ATCC 824]
 gi|325509472|gb|ADZ21108.1| D-alanyl-D-alanine carboxypeptidase [Clostridium acetobutylicum EA
           2018]
          Length = 351

 Score =  159 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 75/326 (23%), Positives = 132/326 (40%), Gaps = 14/326 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  ++ + + +L+      +            +D+NT  ++ E   D     AS TK+MT
Sbjct: 5   RSIVLALIVCILTPATFAKADKLNLNARCAIAIDSNTKMILYEKNADMIVPMASTTKIMT 64

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           + V   +       L    TISK A+    S   +K G  +TL   L  L+++S ND A+
Sbjct: 65  SLVAIKY-----GNLDKKFTISKKAASIRGSKVGYKAGEEITLRELLYGLMLRSGNDAAI 119

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE +    +KF   MN  +  +G   +HF   HG+ +  HY TA D+A ++   K + 
Sbjct: 120 CIAEGIAGNTEKFADLMNEYAYKIGAFNSHFQTPHGLDKDLHYCTAYDLAFITSVAKENK 179

Query: 182 PQYMHYFQIKGLEIKG---KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                         +    + Y N N  +    GADG+KTG+T  +G  +V+S       
Sbjct: 180 VFNDIVSSKDVGSGQYGFTRSYHNINKILYQIPGADGVKTGYTGNAGKCLVSSVKMNGHD 239

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEE 295
           +I V+L       R K +  +      N   +K ++     +                 +
Sbjct: 240 VIFVVLNCT---PRWKETKRMYEYVKKNYEYKKMVSKGDVVYSGNVLNGGGKVKLLAPSD 296

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFI 321
           +     +   Y+ ++  +KD +S  +
Sbjct: 297 IYIPCSKNKIYSKKVIVSKDIKSPIL 322


>gi|229138262|ref|ZP_04266857.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
 gi|229195769|ref|ZP_04322529.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
 gi|228587666|gb|EEK45724.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
 gi|228645154|gb|EEL01391.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
          Length = 378

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 131/336 (38%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++      +                L++  +G V+       P   AS+
Sbjct: 5   MRRICVIITLLIMYASVIPIPTYAKMTSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 296 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 331


>gi|206978265|ref|ZP_03239143.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|217959045|ref|YP_002337593.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|222095199|ref|YP_002529259.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|206743514|gb|EDZ54943.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|217067033|gb|ACJ81283.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|221239257|gb|ACM11967.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
          Length = 374

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 131/336 (38%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++      +                L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLLIMYASVIPIPTYAKMTSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 327


>gi|157803860|ref|YP_001492409.1| penicillin-binding protein DacF precursor [Rickettsia canadensis
           str. McKiel]
 gi|157785123|gb|ABV73624.1| Penicillin-binding protein DacF precursor [Rickettsia canadensis
           str. McKiel]
          Length = 306

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 136/263 (51%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+     A +S     +       +    ++D  +G V+  +    P  PASLTKLMT 
Sbjct: 10  IFIATFFFAPISEAKKNVQNTLKPPVQTSLVIDAKSGKVLQSHNSQIPIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFESIEAGKLSLDKKLFVSAKASQMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE++  +EK F   MN  +K LG+  T+F NA G       TTARD+A L+  +K D+P
Sbjct: 130 VAENMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDIAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y   F       +G      N     + GA+GMKTGF   +G+N+V +A +  +SLIAV
Sbjct: 190 KYYPLFSKTSFVFRGNIINGHNRVTKNYQGAEGMKTGFHTPAGYNLVTTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFY 265
           + G+    +R++    LL   F 
Sbjct: 250 VTGSRSAVSRDQKMIGLLDHYFN 272


>gi|306830534|ref|ZP_07463702.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|304427328|gb|EFM30432.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 416

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 69/367 (18%), Positives = 133/367 (36%), Gaps = 34/367 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++     A+ +          A         +   ++  TG V+ E     P   AS+T
Sbjct: 5   MKKIFAFFAIFLTFLAVGSKVSADDDFDVAAEHAIAVEATTGKVLYEKDATTPDGIASMT 64

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA- 116
           K++T Y+V+  + E K    T ++IS  A +   ++               +L+      
Sbjct: 65  KILTVYLVYKAIDEGKLSWDTKVSISDYAYDLTANSDASNVPMEAREYTVEQLVNAAMVA 124

Query: 117 --NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-------------- 160
             N  A+A+AE +  TE KFV  M    +  G++    +NA G+                
Sbjct: 125 SANSAAIALAEQIGGTESKFVDMMKAQLEEWGITDATIVNASGLNNSYLGDNIYPGSSST 184

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGM 216
             +  +ARD+AI++  + T++P  +        +  G      N+ +        G DG+
Sbjct: 185 DENMMSARDVAIIAQHLITEYPDILKITSQTTADFDGTTMNTYNYMLEGMPYERSGVDGL 244

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKK 272
           KTG T  +G + VA++ +    +I+V++ A         R + +  LL     N      
Sbjct: 245 KTGTTELAGASFVATSTENGMRIISVVMNADGWEDDEYARFEATNDLLEYVKSNYEMVTL 304

Query: 273 INYII-----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           +         K       +  V  ++ E     +  IN +     + + + +     K  
Sbjct: 305 VKAGKSYQSSKATVNDGKAKSVAAVASEDLKVVR-RINTDVSADFSTNADGYDAPITKGQ 363

Query: 328 LLKNKIT 334
            +     
Sbjct: 364 KIGTITY 370


>gi|317057431|ref|YP_004105898.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
 gi|315449700|gb|ADU23264.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
          Length = 382

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 71/333 (21%), Positives = 133/333 (39%), Gaps = 16/333 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           LV++ +  L+ I                + + +TG V+ E   D P   AS TK+M+A +
Sbjct: 15  LVLLMIFTLNTINAKAESKLQISAKAAIVYNGSTGEVLFEKNADEPLPMASTTKIMSALI 74

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           V          L    T+   A     S+   ++G  ++L +    +++ S ND A A A
Sbjct: 75  VLEQED-----LDERFTVDSEAVNTEGSSMGLREGDEVSLRDLACGMLLPSGNDAANAAA 129

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--GHYTTARDMAILSWRIKTDFP 182
             +  + + FV  MN  ++ LGL +THF+   G+  +   HY+TARDMA+L+     +  
Sbjct: 130 VRVAGSIENFVGMMNERAEKLGLESTHFVTPSGLDDYTDDHYSTARDMAVLAAEAMENQD 189

Query: 183 ----QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                 +   +++      +++      +    G  G+KTGFT  +   +V+S ++    
Sbjct: 190 FRDICGLQRVKLEFGCPPYERWLINTNKLLKNHGITGIKTGFTDKARRCLVSSCMREGCE 249

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE--V 296
           LI V L   D     K   +L   GF +    K                +V     +  +
Sbjct: 250 LICVTLNDPDD---WKDHMALFDYGFSHVEQVKLSPKQHDIRLMTADGRQVLCKVPDMVI 306

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             T+       +++       +   + +K+  +
Sbjct: 307 TMTRDGASRSESRVYLPDFIYAPVNNGDKVGEI 339


>gi|295091424|emb|CBK77531.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cf.
           saccharolyticum K10]
          Length = 474

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 112/264 (42%), Gaps = 24/264 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +     K     L D     V+ E   D    PAS+TKLMTA +V          L+
Sbjct: 82  AGQTAVPQIKSDAAVLYDATHDRVLYEKNADAQHYPASITKLMTALLVLEHC-----SLS 136

Query: 78  TPITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             +T S+      E        K G   T++  L  L++KSAN+IA  +AE +  +   F
Sbjct: 137 DTVTFSQSAVTNLESGAVTLGVKAGDQFTIEQCLYGLLLKSANEIANGLAEHVSGSVSSF 196

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM-------------AILSWRIKTDF 181
              MN  + +LG + THF+N +G+    HYTTARDM               ++  +  DF
Sbjct: 197 ADLMNQKAASLGCTGTHFVNPNGLNDPNHYTTARDMALIAEAAFENPTLCRIASTVNYDF 256

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P       ++ L +   K  N N     + G  G KTG+T  +G  +V    +    LIA
Sbjct: 257 PATASVPSVRKLTMG-HKMVNPNNKEYYYEGIVGGKTGYTSLAGNTLVTCVERNGTRLIA 315

Query: 242 VILGALDRNTRNKVSASLLSMGFY 265
           VIL    R T    + +LL  GF 
Sbjct: 316 VIL--KSRQTHYADTKALLDYGFS 337


>gi|288553434|ref|YP_003425369.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudofirmus OF4]
 gi|288544594|gb|ADC48477.1| D-alanyl-D-alanine carboxypeptidase S11 serine type [Bacillus
           pseudofirmus OF4]
          Length = 374

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 72/342 (21%), Positives = 135/342 (39%), Gaps = 18/342 (5%)

Query: 2   RQFLVIIAMAMLSN-IFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +  ++++ ++ L     P  + A      +     L+D  TG  +          PAS+T
Sbjct: 10  KSIMLLLCVSFLIAQAVPQQAKASDTPVIESETAVLIDGATGETLWGKDSTKRMYPASVT 69

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K++TA V           L   + +S+N  +   +      G  ++L   ++ L++ S N
Sbjct: 70  KIITAIVAIEE-----GNLEEKVAVSENVMDVIGTRVYLLPGEEVSLLKLVQGLMINSGN 124

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTS-KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           D  +AIAE +  +E+ F + MN    + +G+  +HF N HG+    HYTTA+D+A+++  
Sbjct: 125 DAGLAIAEHMDGSEEAFAKRMNRFVEEEIGVKDSHFTNPHGLFDENHYTTAKDLAMITKY 184

Query: 177 IKTDFPQYMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +          +   I         N +  +  + G  G+K GF   SGF +  +  
Sbjct: 185 AMENEVFKEIAQTKEMEWIGEGWETTIYNHHRMLWDYDGVTGVKNGFVQRSGFTLSTAVE 244

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           + D  LIAV L A       + +A+L   GF             + F  ++         
Sbjct: 245 RDDMELIAVTLNAPAAKVSYQDTAALFDYGFTRYEPHVI--KSDRLFSDESGRKYELEND 302

Query: 294 EEVCTTQKEIINYNTQMK---EAKDKESHFIDFEKITLLKNK 332
                 + +        +   + K+ E   +    +  LK+K
Sbjct: 303 IYYVMEKGKESTVEVTNEGMLQIKNTEGKVLKEVPLKELKDK 344


>gi|291087166|ref|ZP_06345583.2| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
 gi|291075839|gb|EFE13203.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
          Length = 464

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 112/264 (42%), Gaps = 24/264 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +     K     L D     V+ E   D    PAS+TKLMTA +V          L+
Sbjct: 72  AGQTAVPQIKSDAAVLYDATHDRVLYEKNADAQHYPASITKLMTALLVLEHC-----SLS 126

Query: 78  TPITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             +T S+      E        K G   T++  L  L++KSAN+IA  +AE +  +   F
Sbjct: 127 DTVTFSQSAVTNLESGAVTLGVKAGDQFTVEQCLYGLLLKSANEIANGLAEHVSGSVSSF 186

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM-------------AILSWRIKTDF 181
              MN  + +LG + THF+N +G+    HYTTARDM               ++  +  DF
Sbjct: 187 ADLMNQKAASLGCTGTHFVNPNGLNDPNHYTTARDMALIAEAAFENPTLCRIASTVNYDF 246

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P       ++ L +   K  N N     + G  G KTG+T  +G  +V    +    LIA
Sbjct: 247 PATASVPSVRKLTMG-HKMVNPNNKEYYYEGIVGGKTGYTSLAGNTLVTCVERNGTRLIA 305

Query: 242 VILGALDRNTRNKVSASLLSMGFY 265
           VIL    R T    + +LL  GF 
Sbjct: 306 VIL--KSRQTHYADTKALLDYGFS 327


>gi|71910630|ref|YP_282180.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS5005]
 gi|71853412|gb|AAZ51435.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS5005]
          Length = 442

 Score =  158 bits (400), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 149/362 (41%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 33  IKRWVILFFMVLTCSGFGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 92

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 93  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 152

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 153 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSALEE 212

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+K
Sbjct: 213 ENMLSAQDVAIVTMHLLEDFPEILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLK 272

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    LI VIL A       NTR + +  LL         RK +
Sbjct: 273 TGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 332

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 333 KKGSLVSERSLPIQDGQVKELPISVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 392

Query: 328 LL 329
           ++
Sbjct: 393 VV 394


>gi|302672276|ref|YP_003832236.1| D-alanyl-D-alanine carboxypeptidase DacA3 [Butyrivibrio
           proteoclasticus B316]
 gi|302396749|gb|ADL35654.1| D-alanyl-D-alanine carboxypeptidase DacA3 [Butyrivibrio
           proteoclasticus B316]
          Length = 488

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 67/277 (24%), Positives = 109/277 (39%), Gaps = 18/277 (6%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN                 ++D +TG ++          PAS TK+MT  +         
Sbjct: 61  SNETSGWPEGPQIGAEAAIVMDASTGTILYAKNIHEELYPASTTKIMTCLLAVENA---- 116

Query: 74  AMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             L+  IT S  A        S+     G ++TL+ AL  ++V SAN++A A+AE +  +
Sbjct: 117 -SLSDKITFSNEAVFSVPRDGSSIGMDVGESITLEQALFGIMVGSANEVANAVAEHVSGS 175

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD---------F 181
              FV  MN  +  LG + THF N +G+    HYT+A D+A+++     +          
Sbjct: 176 IDAFVNLMNQRASELGCTNTHFNNTNGLQDDDHYTSAYDLALIARAFFNNELLCKVGNTP 235

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
             +      +  +               F G  G KTG+T  +   +V  A +    LI 
Sbjct: 236 RYHFTETSTQPDDFYLNNKHKLITGEVKFDGIIGGKTGYTDQARETLVTCAERDGVKLIC 295

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           VIL     +     + +L + GF N T     +   +
Sbjct: 296 VILKEESPSQ-FTDTVTLFNYGFNNFTSVNVADTDTR 331


>gi|323126583|gb|ADX23880.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 412

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 145/366 (39%), Gaps = 31/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++  V++ + +     P  S   +        ++ ++G ++ E   D     AS+TKL+
Sbjct: 2   IKRLFVVLLITLAFGATPVNSDDFSVAAKQAIAVEVDSGKILYEKEADKAVPVASITKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +   K    + +TIS            ++        T+   LK LIV +AN
Sbjct: 62  TTYLVYKEIANGKLEWGSSVTISNYPYELTTNYSISNVPLDARKYTVKELLKALIVTNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------GH 163
             A+A+AE +  TE KFV  M+   K  G+S    +NA G+  H               +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMSQQLKEWGISDAKLVNATGLPNHFLGENKYPKTEDEDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTG 219
             +ARD+AI++  + T+FP+ +           G+   + N+          G DG+  G
Sbjct: 182 LFSARDLAIIARHLLTEFPEVLKITSKPSANFAGQTIYSYNYMLKDMPYYRDGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           ++   G + VA++++    +I V+L A     D       +  LL     N    + +N 
Sbjct: 242 YSEKGGASFVATSVENRMRVITVVLNADQAQEDEFAVFSATNQLLQYLLTNFQKVQVLNK 301

Query: 276 IIKDFYQQ-----NLSNEVPNISEE-VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                 +      + +  VP ++E+ +   +         +   KD        +K  +L
Sbjct: 302 SKSGQVKAFPILDSPNKSVPLVAEKNLSLIKPANSKIKKALHITKDSSIISAPVKKGQVL 361

Query: 330 KNKITK 335
                +
Sbjct: 362 AKATLQ 367


>gi|251781775|ref|YP_002996077.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390404|dbj|BAH80863.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 412

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 145/366 (39%), Gaps = 31/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++  V++ + +     P  S   +        ++ ++G ++ E   D     AS+TKL+
Sbjct: 2   IKRLFVVLLITLAFGATPVNSDDFSVAAKQAIAVEVDSGKILYEKEADKAVPVASITKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +   K    + +TIS            ++        T+   LK LIV +AN
Sbjct: 62  TTYLVYKEIANGKLEWGSSVTISNYPYELTTNYSISNVPLDARKYTVKELLKALIVTNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------GH 163
             A+A+AE +  TE KFV  M+   K  G+S    +NA G+  H               +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMSQQLKEWGISDAKLVNATGLPNHFLGENKYPKTEDDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTG 219
             +ARD+AI++  + T+FP+ +           G+   + N+          G DG+  G
Sbjct: 182 LFSARDLAIIARHLLTEFPEVLKITSKPSANFAGQTIYSYNYMLKDMPYYRDGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           ++   G + VA++++    +I V+L A     D       +  LL     N    + +N 
Sbjct: 242 YSEKGGASFVATSVENRMRVITVVLNADQAQEDEFAVFSATNQLLQYLLTNFQKVQVLNK 301

Query: 276 IIKDFYQQ-----NLSNEVPNISEE-VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                 +      + +  VP ++E+ +   +         +   KD        +K  +L
Sbjct: 302 SKSGQVKAFPILDSPNKSVPLVAEKNLSLIKPANSKIKKALHITKDSSIISAPVKKGQVL 361

Query: 330 KNKITK 335
                +
Sbjct: 362 AKATLQ 367


>gi|90420271|ref|ZP_01228179.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335605|gb|EAS49355.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 455

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 99/278 (35%), Positives = 160/278 (57%), Gaps = 3/278 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D  TG V+++ +      PAS TKLMTAY+    L+E +  L +P+ +++ ++  
Sbjct: 27  ASIVVDVATGKVLSQQHATERRYPASTTKLMTAYLALRALRESRLSLDSPVIVTRRSAAE 86

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            PS   FK GS + LD AL++++VKSANDIA AI E++  + ++FV  MN+ +  LG+  
Sbjct: 87  APSKMGFKPGSVIRLDFALRMMLVKSANDIAYAIGETVGGSMEEFVAMMNDAAAQLGMQD 146

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F+NA+G+   G +++A+D+AIL   I+ +FP +  YF  + +        N N  +G 
Sbjct: 147 TRFINANGLPGEGQHSSAKDLAILGVAIRREFPAFADYFGTEAISNGTAILKNGNKLLGR 206

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           F GADGMKTG+ CASGFN+V+SA +  ++L+AV++GA     R ++SA +L  GF     
Sbjct: 207 FDGADGMKTGYICASGFNLVSSATRNGRTLVAVVIGANGTIPRERLSAEILEAGFA---T 263

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
                 I  D        E  ++S+ +C+ +      N
Sbjct: 264 DPASVDIRVDELPVASDTEPLDVSDYICSAEGRTARAN 301


>gi|239833080|ref|ZP_04681409.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
 gi|239825347|gb|EEQ96915.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum intermedium
           LMG 3301]
          Length = 389

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 110/289 (38%), Positives = 176/289 (60%), Gaps = 3/289 (1%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
             +D  TG V A+      W PASLTK+MTAYV F  L+  +  L +P+ ++ NA++ PP
Sbjct: 47  IAVDVATGKVYAQQDAFQRWYPASLTKMMTAYVAFRALQSGQMTLESPVRMTVNAAKEPP 106

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   +K GS MTLD+ALK+++VKSAND+AVA+AE++  TE  FVQ MN  ++ +G+  +H
Sbjct: 107 SKMGYKPGSVMTLDSALKIMLVKSANDVAVAVAEAVGGTESAFVQRMNAEAQRIGMVGSH 166

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--YPNTNWAVGT 209
           F N +G+    +YTTARD+A+L+ +++ +FPQY HYF  + ++    K    N N  +G 
Sbjct: 167 FANPNGLHDPQNYTTARDLAVLAVQLRREFPQYAHYFATEAIDPGAGKKVQANYNILLGR 226

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           + GADGMKTGF CASGFN+ +SA +  ++++A++LGA  +  R   +A L++  F     
Sbjct: 227 YDGADGMKTGFVCASGFNLASSATRNGRTVLAIVLGADRQEARAVQAAQLMTDAFRASAG 286

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
                  ++     NL N+  ++ + +C+ +     ++ +  E K K +
Sbjct: 287 GGATLATLRPTGGGNL-NQATDMRKAICSQEAMADRWDGRDVEGKLKIN 334


>gi|218463771|ref|ZP_03503862.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli Kim 5]
          Length = 385

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 11/316 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            K     +++ +TG V+     D  ++PASL KLMT  +VF  + + +  L T   +S+ 
Sbjct: 19  TKAAQAYMIEASTGTVLLAKNEDQGFSPASLAKLMTMNLVFDAVTKGQITLDTEYPVSEY 78

Query: 86  ASEYPPS-----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           A     +            S + +++ +K + ++ AND  + +AE +  +E++F + M  
Sbjct: 79  AWRTGGAPSRTATMFAALKSRVRVEDLIKGVAIQGANDSCIILAEGMAGSEQQFAESMTR 138

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ +G+    F N+ G+       TAR+M  L+  ++  +P    YF +   E      
Sbjct: 139 RAREIGMDKAVFGNSTGLPDGKSKVTAREMVTLAAALQQSYPNLYPYFALPDFEWNKIFQ 198

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G  LGADG+ TGFT   G++IVAS  +  + L   + G      R + +  +L
Sbjct: 199 RNRNPLLGLDLGADGLATGFTEGEGYSIVASVQRDGRRLFLALAGIASDKERTEEAKRVL 258

Query: 261 SMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISE---EVCTTQKEIINYNTQMKEAK 314
             G     +R+       I         +  V  I++    V          + ++    
Sbjct: 259 EWGLTAFENRQIFAEHEVIGAASVYGGTARTVDLIAKAPVSVYIPVSNPDRLSARIVYRW 318

Query: 315 DKESHFIDFEKITLLK 330
              +      +   L+
Sbjct: 319 PLTAPVPPDYQAGTLR 334


>gi|291531257|emb|CBK96842.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum 70/3]
          Length = 390

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/361 (20%), Positives = 138/361 (38%), Gaps = 37/361 (10%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----------------NKLPYYTLLDTNTGHVIAEN 45
           R+ L + A  + +        AE+                       L++ +TG V+   
Sbjct: 3   RKILSVAAAVIFAVTATVTVYAESAKKLCYLENTDKSGIGVSAVSAILIEADTGTVLFSK 62

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                   AS TK+MTA +     +           +   A +   ++   ++G  +T  
Sbjct: 63  NEKEHRQIASTTKIMTALLTLEAGE-----PDKEFEVDPTAIKVEGTSMGLREGDIVTRR 117

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
                +++ S ND A A A ++  ++  F   MN  ++ +G++ T+F+   G+   G Y+
Sbjct: 118 ALCYGMLLPSGNDAANAAAVNISGSKSAFAVLMNKRAEEIGMTDTNFVTPSGLDADGQYS 177

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
            A D+A+L+     +          K     G     +   N+N  + ++ G  G+KTGF
Sbjct: 178 CAYDLALLTREAMNNKDFAKICGLPKAKVSFGNPKSDRILVNSNKLLTSYDGCIGVKTGF 237

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT------DRKKIN 274
           T ++   +V+ A +    LIAV L A +        A +L  GF   T      D   ++
Sbjct: 238 TDSARRTLVSCAERDGVRLIAVTLNAPND---WSDHAKMLDYGFEKVTLCEMKYDSSALS 294

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             +    ++ +S E   +   +C  QK+ I     M   K   +     EK+  +   + 
Sbjct: 295 LSVVGSEKETVSVECGTVKLPLCNEQKDKITAEIYM--PKFIYAGLAAGEKVGEIHYLLN 352

Query: 335 K 335
            
Sbjct: 353 G 353


>gi|68171447|ref|ZP_00544835.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ehrlichia chaffeensis
           str. Sapulpa]
 gi|88657866|ref|YP_507852.1| D-alanyl-D-alanine carboxypeptidase family protein [Ehrlichia
           chaffeensis str. Arkansas]
 gi|67999128|gb|EAM85790.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ehrlichia chaffeensis
           str. Sapulpa]
 gi|88599323|gb|ABD44792.1| D-alanyl-D-alanine carboxypeptidase family protein [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 381

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 137/339 (40%), Gaps = 9/339 (2%)

Query: 1   MRQFLVIIAMAMLSN---IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +R  ++++    +S    I   +++      P   + D  +  ++ E+  D    P+S+T
Sbjct: 2   LRHIILLLLYCFISIQVHISNAVALPIQTTAPQAAVFDFFSNTMLLEHNIDEQIAPSSMT 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
            LMT YV F ++K     +      SK A +   ++   + G  + + + +  +I  SAN
Sbjct: 62  NLMTLYVTFYYIKAGFVKMEDKFKTSKEAWQKGGNSIFLRAGQLVAVRDLINGIITTSAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  + +AE +  +++ FV  MN  ++ L L+ +HF N  G      + + RD+  L+ RI
Sbjct: 122 DACITLAEGVAGSQENFVDEMNRIAQKLNLTKSHFSNVIGAQDKNQFMSIRDLITLTVRI 181

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             DFP+Y H F  K  +       N N         DG+ + +T A G+  + +A    +
Sbjct: 182 FEDFPEYYHLFSKKDFKYNNIYQENINLLS-PDNRIDGIISIYTDAGGYGSIVAAKHEGR 240

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNIS 293
            +  +I G      R      LL   F + + +   +   K         +        +
Sbjct: 241 RIFILISGLKTEKERISEIKQLLDYAFNDFSSQTIFHKGSKAKEIIVKNGDAKYVEAVFN 300

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +V     +  +Y+T       + +     +K   + + 
Sbjct: 301 NDVIILYPKG-SYDTVKTFFSHENAISAPVKKGQEVGHL 338


>gi|27380267|ref|NP_771796.1| D-alanyl-D-alanine carboxypeptidase [Bradyrhizobium japonicum USDA
           110]
 gi|27353431|dbj|BAC50421.1| blr5156 [Bradyrhizobium japonicum USDA 110]
          Length = 611

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 88/231 (38%), Positives = 138/231 (59%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G V+    PD   +PASLTK+MT Y++F  L+  K  L T + +S++A++ 
Sbjct: 60  ASIIVDGNSGSVLQATSPDGIRHPASLTKIMTLYLLFERLESGKMKLDTEMPVSQHAADQ 119

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G T+ +++A+K L+ +SAND AV IAE++   E  F Q M   +++LG+S 
Sbjct: 120 DPTKLNLRAGQTIRVEDAIKGLVTRSANDAAVVIAEAIAGDEDDFAQMMTRKARSLGMSK 179

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T + NA+G+      TTARD A L   I+  FP+Y  YF       +G+   N N  +G+
Sbjct: 180 TVYRNANGLPNDEQVTTARDQATLGRAIQERFPRYYRYFATSTFNWRGQSIRNHNHLLGS 239

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
             G DG+KTG+T ASGFN+V S  +G++ LI V+LG     +R+ +  +LL
Sbjct: 240 VEGVDGIKTGYTRASGFNLVTSMRRGNRHLIGVVLGGRSGGSRDAIMRNLL 290


>gi|159184785|ref|NP_354505.2| penicillin binding protein [Agrobacterium tumefaciens str. C58]
 gi|159140073|gb|AAK87290.2| penicillin binding protein [Agrobacterium tumefaciens str. C58]
          Length = 390

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/322 (21%), Positives = 121/322 (37%), Gaps = 8/322 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     K     ++D  TG V+     D  + PASL KLMT  VV   L + +    T
Sbjct: 28  SQTAPFIAKAEQAYMIDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDALSKGQVTPET 87

Query: 79  PITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
              +S+ A          S       S++ +++ L  +IV++AND  + +AE +  ++  
Sbjct: 88  AYPVSEYAWRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQNANDGCIIVAEGMAGSDAA 147

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F + M   +  LG++ + F N+ G+   G+ TTARDM  L+  +   +P     F     
Sbjct: 148 FAKRMTARAGELGMNRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDRYALFTKPDF 207

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           E       N N  +    G DG+  GF   SGF  V SA +  + +   + G  D  TR 
Sbjct: 208 EWNRIFQRNKNTLLMPGSGIDGLGLGFAEGSGFAAVVSAEREGRRVYLALAGIADDKTRQ 267

Query: 254 KVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           + +  ++  G      R   +               + +    +E  +    + N +   
Sbjct: 268 EEARRVVDWGLTAFEKRHLFSKDEAVGAVSVYGGDVSHIDLSPKEDVSVLVPVNNPDRIS 327

Query: 311 KEAKDKESHFIDFEKITLLKNK 332
                +       +        
Sbjct: 328 GRIVYRWPLNAPLDVGANAGTL 349


>gi|297582349|ref|YP_003698129.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           selenitireducens MLS10]
 gi|297140806|gb|ADH97563.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           selenitireducens MLS10]
          Length = 465

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 79/405 (19%), Positives = 147/405 (36%), Gaps = 71/405 (17%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           ++++   L  + ++    +    + A     +    L+D  +G V+ E   D P  PAS+
Sbjct: 2   LKKWGYALAAVTVSAAVLVPTERAEASYEPTVDTVILVDAKSGRVLFERNIDQPLPPASM 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISK----NASEYPPSNSTFKKGSTMTLDNALKLLI 112
           TK+M+ Y++   + +      T + IS      +     SN   +      ++   + + 
Sbjct: 62  TKMMSEYLILEAVNDGDISWDTNVPISDFLASLSHNRSLSNVPLRVDGEYNVEELYESVA 121

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS------------------------ 148
           + SAN   +A+AE +  +E  FV  MN     LGL                         
Sbjct: 122 IYSANASTMALAELISGSEGAFVSEMNEKGVELGLGTLMREAGGEYGLEDLGEISEEGLG 181

Query: 149 ATHFMNAHGVVQH--------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           +  F+N+ G+                  +Y +AR  A L++ +  D+P+ +    I    
Sbjct: 182 SFQFVNSTGLPNRLLEGNHPEGTGAEEDNYMSARAAATLAYYLVNDYPEVLDVAGIPHKV 241

Query: 195 IKGKK-----YPNTNWA-------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
            +         PN N            +   DG+KTG T A+GF    +  +  Q L++V
Sbjct: 242 FREGTGDAIDMPNWNNMIPGTENSHLDYEYVDGLKTGHTNAAGFTFTGTGEKDGQRLVSV 301

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD------FYQQNLSNEVPNISEE- 295
           ++GA     R + +  +L  GF    + +                 +    EVP  S E 
Sbjct: 302 VMGADSIEHRFQETQRVLEWGFNTFYEEEIYAAGYSPDGFETIAVSKGEEEEVPLESTEA 361

Query: 296 ----VCTTQKEIINYNTQMKEAKDKE--SHFIDFEKITLLKNKIT 334
               +    +E+ +Y   + E    E  +     E  T++   I 
Sbjct: 362 IHRLIQEGDEELYSYEVVLDEDLLDEDGAMEAPVEAGTVVGQMII 406


>gi|254505026|ref|ZP_05117177.1| D-alanyl-D-alanine carboxypeptidase superfamily [Labrenzia
           alexandrii DFL-11]
 gi|222441097|gb|EEE47776.1| D-alanyl-D-alanine carboxypeptidase superfamily [Labrenzia
           alexandrii DFL-11]
          Length = 299

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 96/260 (36%), Positives = 143/260 (55%), Gaps = 3/260 (1%)

Query: 9   AMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           A A+ +   P +S A            +L+  TG  +     D P  PASLTK+MT Y++
Sbjct: 38  AAAVQTASLPVVSYAPATAQERGFSALVLNAATGQELYAVNADAPRFPASLTKMMTLYML 97

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           F  +   +  L++P+ IS NA+  PP+    K GST++++ A + L VKSAND+ VA+AE
Sbjct: 98  FESVSSGENRLSSPLNISANAASQPPAKIGLKAGSTISVEQAARALAVKSANDVGVAVAE 157

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           +L  +E  F + M   ++ LGLS T F+NA G+      TTARDMA L   +K  FPQY 
Sbjct: 158 NLAGSEAAFAREMTQKARALGLSRTRFVNATGLPDPAQVTTARDMAKLGLALKRRFPQYA 217

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            Y++ K     G+ +  TN  +G   G DG+KTG+   SG+N+VA+A +G + LI V++G
Sbjct: 218 SYYRAKSFTYNGRTFRATNNLLGKVQGVDGLKTGYVRMSGYNLVATARRGGKQLIVVVIG 277

Query: 246 ALDRNTRNKVSASLLSMGFY 265
                 R+     L+   F 
Sbjct: 278 GQSETARDAEVTRLIEAHFQ 297


>gi|320120306|gb|EFE28569.2| serine-type D-Ala-D-Ala carboxypeptidase [Filifactor alocis ATCC
           35896]
          Length = 443

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 76/361 (21%), Positives = 141/361 (39%), Gaps = 38/361 (10%)

Query: 2   RQFLVIIAMAMLSNIF------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +  L  + +   +            + +         L++  TG ++ E   D P  PAS
Sbjct: 9   KNLLFAVIIFFNTVFLHDIHAVATNTPSLGLNCSTAVLIEEETGKILYEKQKDVPVYPAS 68

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MTA +           L   IT+ ++      S      G T T++  L+ L+VKS
Sbjct: 69  TTKIMTALLTLEH-----LDLNQKITVPEDMGPADGSAMYLLPGETFTVEELLQGLLVKS 123

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+++  + ++F   MN  ++ +G   THF+N +G+    H T+A D+A+++ 
Sbjct: 124 ANDAAILLAKNISGSVEEFSNLMNQRAQEIGCQNTHFVNPNGLHDPNHTTSAYDLALIAR 183

Query: 176 RIKTDFP------QYMHYFQIKGLEIKGKKYPNTNWAVG--------------TFLGADG 215
               +                     + + + NTN  +                +   DG
Sbjct: 184 EAMKNPKFRELVSTDFVQIHATEQTPEIRYFRNTNKFLWSKQTIDYKGISTPIKYDVIDG 243

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTG+T  +G  +V+S  +    LIAV++           S  LL  GF N T +K    
Sbjct: 244 IKTGYTPEAGKCLVSSGEKNGIRLIAVVMKNQGLEV-YANSRKLLDYGFQNFTKKKIFTA 302

Query: 276 IIKDFYQQNLSNEVPN----ISEEVCTTQKEIINYNTQMKE--AKDKESHFIDFEKITLL 329
                    + +   N    + E+  + +        + +    ++ +      E+I  L
Sbjct: 303 NEVAGTTVIVDSLEKNLDFYVKEDYYSIENINSKSEIEQEVFLNENIKFPIHVDEEIGTL 362

Query: 330 K 330
           K
Sbjct: 363 K 363


>gi|266621645|ref|ZP_06114580.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288866679|gb|EFC98977.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 541

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 25/297 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-----TNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M  FL+ + + M +     L+  +     + +     ++D +TG V+      + + PAS
Sbjct: 20  MSAFLLCLMLLMGAFPATALAAPDWPSGVSVQAESGIVIDADTGTVLWGQNIHNQYFPAS 79

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLI 112
           +TK+MTA +V          L   +T S NA        SN+   +G  +++ + L  L+
Sbjct: 80  ITKIMTALIVIETC-----SLDETVTFSHNAVFNVEAGSSNAGINEGDKLSVKDCLYALL 134

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           +KSAN+ A A+AE +  + + F   MN  +K LG + THF N  G+    HYT+  DMA+
Sbjct: 135 LKSANEAANALAEHVAGSTEAFADMMNAKAKELGCTDTHFANPSGLNDPEHYTSTYDMAL 194

Query: 173 LSW-------RIKTDFPQYMHYFQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTGFT 221
           ++          + D   Y               YP            + G  G KTG+T
Sbjct: 195 IARAAFLNPTFEEIDSTAYYKLPPNSINPEGLTIYPGHKMLKKSTPYYYPGIVGGKTGYT 254

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
             +G  +V  A +    LIAVIL           + +LL  GF N    +  ++  K
Sbjct: 255 TLAGNTLVTCARKNGLKLIAVILKGSTP-QYWTDTKNLLDFGFENFVSVRAADHETK 310


>gi|50914161|ref|YP_060133.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10394]
 gi|50903235|gb|AAT86950.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10394]
          Length = 415

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++++ ++  + +  +    + +A        +  +++ ++G V+ E     P   ASLTK
Sbjct: 6   IKRWAILFFVVLTCSGLSKIVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 66  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 126 SNSAAIALAEKVAGSEPHFVNQMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSALEE 185

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++ R+  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 186 ENTLSAQDVAVVTMRLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 245

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 246 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 305

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 306 KKGSLVSERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 365

Query: 328 LL 329
           ++
Sbjct: 366 VV 367


>gi|139473812|ref|YP_001128528.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes str.
           Manfredo]
 gi|134272059|emb|CAM30298.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes str. Manfredo]
          Length = 411

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 147/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++++ ++  + +  +    + +A        +  +++ ++G V+ E     P   ASLTK
Sbjct: 2   IKRWAILFFVVLTCSGLSKIVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 61

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 62  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 122 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDNRYPGSALEE 181

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 182 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 241

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 242 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 301

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 302 KKGSLVSERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 361

Query: 328 LL 329
           ++
Sbjct: 362 VV 363


>gi|218666161|ref|YP_002427291.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|218518374|gb|ACK78960.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 389

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 80/308 (25%), Positives = 130/308 (42%), Gaps = 8/308 (2%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               LLD N+G V+     + P NP+ L KLMTAYV++   K+       P+ +S  A  
Sbjct: 46  QGAVLLDVNSGQVLVAENAEKPLNPSGLVKLMTAYVMYQAEKQGLVPPQRPVHVSNEAWH 105

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    +    +T+      L++   ND AVAIA+++  +   FV  MN+ +  +GL 
Sbjct: 106 AQGSRMFIQPHLPVTMTQLEHGLLIDGGNDAAVAIAQTVAGSVGGFVDLMNHDAAAMGLQ 165

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            THF N  G+ Q G  +TA D+A LS R+   +P  +                N N   G
Sbjct: 166 HTHFTNPDGLPQPGQTSTALDIARLSKRLIQAYPHVLQVAGKVSYTYNHITQYNYNPLAG 225

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                +G+  G    + +N+  SA +G ++L+AV+LGA  R+     +++LL  G+    
Sbjct: 226 Q-ENINGLGVGLAAKNSWNLDVSATRGGRTLVAVVLGAPSRSAAGSDASALLDYGWNGWQ 284

Query: 269 DRKKINYI-----IKDFYQQNLSNEVPNISEEVCTTQK--EIINYNTQMKEAKDKESHFI 321
           +            I+         E       V +  K  + +  NT+   A   ++   
Sbjct: 285 NLPLYKAGQVVAQIRHVDWSPEVVEGVTTRAVVVSEPKQQQGVRLNTRFIPAAGLKAPIR 344

Query: 322 DFEKITLL 329
               I  L
Sbjct: 345 AGAPIGTL 352


>gi|198284618|ref|YP_002220939.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198249139|gb|ACH84732.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 415

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 80/308 (25%), Positives = 130/308 (42%), Gaps = 8/308 (2%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               LLD N+G V+     + P NP+ L KLMTAYV++   K+       P+ +S  A  
Sbjct: 72  QGAVLLDVNSGQVLVAENAEKPLNPSGLVKLMTAYVMYQAEKQGLVPPQRPVHVSNEAWH 131

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    +    +T+      L++   ND AVAIA+++  +   FV  MN+ +  +GL 
Sbjct: 132 AQGSRMFIQPHLPVTMTQLEHGLLIDGGNDAAVAIAQTVAGSVGGFVDLMNHDAAAMGLQ 191

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            THF N  G+ Q G  +TA D+A LS R+   +P  +                N N   G
Sbjct: 192 HTHFTNPDGLPQPGQTSTALDIARLSKRLIQAYPHVLQVAGKVSYTYNHITQYNYNPLAG 251

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                +G+  G    + +N+  SA +G ++L+AV+LGA  R+     +++LL  G+    
Sbjct: 252 Q-ENINGLGVGLAAKNSWNLDVSATRGGRTLVAVVLGAPSRSAAGSDASALLDYGWNGWQ 310

Query: 269 DRKKINYI-----IKDFYQQNLSNEVPNISEEVCTTQK--EIINYNTQMKEAKDKESHFI 321
           +            I+         E       V +  K  + +  NT+   A   ++   
Sbjct: 311 NLPLYKAGQVVAQIRHVDWSPEVVEGVTTRAVVVSEPKQQQGVRLNTRFIPAAGLKAPIR 370

Query: 322 DFEKITLL 329
               I  L
Sbjct: 371 AGAPIGTL 378


>gi|295399022|ref|ZP_06809004.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110372|ref|YP_003988688.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y4.1MC1]
 gi|294978488|gb|EFG54084.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215473|gb|ADP74077.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y4.1MC1]
          Length = 379

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 20/324 (6%)

Query: 1   MRQF----LVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ +    L I+A+AML +  P  + A          L++ ++G ++ E         AS
Sbjct: 1   MKLWKLIVLFIVAVAMLFSCIPDQAKAMNEVSAQSAVLMEQHSGRILLEKDAHTKRRIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     +   +T+S  A     S+   K+G  + L + +  L+++S
Sbjct: 61  ITKIMTAILALESGK-----MDDTVTVSARAVRTEGSSIYLKEGEKIKLRDLVYGLMLRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVAIAE +  + + FV  MN  +  +G+  T F N HG+    ++ +      L  
Sbjct: 116 GNDAAVAIAEHVGGSVEGFVVLMNQKAAEIGMRNTEFANPHGLDDAENHYSTAYDMALLM 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK------YPNTNW-AVGTFLGADGMKTGFTCASGFNI 228
           +      ++    + K       +      + N N      +    G KTG+T  +   +
Sbjct: 176 QYAMKNKEFRKISRTKVYRAPDPEGKSERVWRNKNKLLTKLYEYCTGGKTGYTKRANRTL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           V +A +    LIAV L A D         ++   GF +    K     +    + +   E
Sbjct: 236 VTTASKDGLDLIAVTLDAPDD---WNDHIAMYEYGFKHYVIAKVDQKRMIKKIRDSFYRE 292

Query: 289 VPNISEEVCTTQKEIINYNTQMKE 312
               S  +     E    + ++K 
Sbjct: 293 NIQASRALRYPVTEEEMKDLRVKI 316


>gi|229059652|ref|ZP_04197030.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH603]
 gi|228719665|gb|EEL71264.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH603]
          Length = 317

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 12/262 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI +N  +    PAS++K+MTAY+V   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAIIIDASNGEVIYQNNENEAVAPASMSKMMTAYLVLESIHNGKVH 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ IS+ +++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKISEKSAQTEGAKIPMQANDTLTVKDLYHALMIESANNSAVALAEHVAKTEKNFV 172

Query: 136 QHMNNTSKNLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D++ L++ +  D+P+ +    ++
Sbjct: 173 QLMNEKAKQLEMSDKAKFANASGLQEPDGSETKMTAADVSKLAYHLIKDYPEILEVTHLR 232

Query: 192 GLE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             +            +  N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVTNTNEMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDNRVITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           +G   +  R   +  L+S  F 
Sbjct: 293 MGTKSKTKRFTETNKLMSYAFQ 314


>gi|94994364|ref|YP_602462.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10750]
 gi|94547872|gb|ABF37918.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10750]
          Length = 451

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 42  IKRWVILFFMVLTCSGFGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 101

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 102 LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 161

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 162 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDNRYPGSALEE 221

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 222 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 281

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 282 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 341

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 342 KKGSLVSERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 401

Query: 328 LL 329
           ++
Sbjct: 402 VV 403


>gi|67459001|ref|YP_246625.1| penicillin-binding protein DacF precursor [Rickettsia felis
           URRWXCal2]
 gi|67004534|gb|AAY61460.1| Penicillin-binding protein DacF precursor [Rickettsia felis
           URRWXCal2]
          Length = 306

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 90/286 (31%), Positives = 137/286 (47%), Gaps = 3/286 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+     A +S     +       +    ++D  +G V+  +       PASLTKLMT 
Sbjct: 10  IFIATFFFAPISEAKKAVKNTSKPPVQTSLVIDAKSGKVLQAHNSQIRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ PP     K G T+T+  A+  LI+KSAND AV 
Sbjct: 70  YLMFEAIEAGKLPLDKKLLVSAKASKMPPCKLGLKAGETITVREAINGLIIKSANDAAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+  +K D+P
Sbjct: 130 VAEGMKGSEKAFAHLMNVKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLAMALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y   F       +G      N     + GA+GMKTGF   +G+N++ +A +  +SLIAV
Sbjct: 190 KYYPLFAKTSFVFRGNIVNGHNRVTKNYQGAEGMKTGFHTPAGYNLITTASRNGKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + G     +R++    LL     +   +  +          N S  
Sbjct: 250 VTGGKSAASRDQKMMGLLD---QHFNIKPIVPKSSIKLASNNKSTT 292


>gi|209559380|ref|YP_002285852.1| Penicillin-binding protein 7 precursor (PBP-7) (D-alanyl-D-alanine-
           endopeptidase) [Streptococcus pyogenes NZ131]
 gi|209540581|gb|ACI61157.1| Penicillin-binding protein 7 precursor (PBP-7) (D-alanyl-D-alanine-
           endopeptidase) [Streptococcus pyogenes NZ131]
          Length = 437

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++++ ++  + +  +    + +A        +  +++ ++G V+ E     P   ASLTK
Sbjct: 6   IKRWAILFFVVLTCSGLSKIVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 66  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 126 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSALEE 185

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+K
Sbjct: 186 ENMLSAQDVAIVTMHLLEDFPEILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLK 245

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    LI VIL A       NTR + +  LL         RK +
Sbjct: 246 TGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 305

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 306 KKGSLVSERSLPIQDGQVKELPISVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 365

Query: 328 LL 329
           ++
Sbjct: 366 VV 367


>gi|229829484|ref|ZP_04455553.1| hypothetical protein GCWU000342_01574 [Shuttleworthia satelles DSM
           14600]
 gi|229791915|gb|EEP28029.1| hypothetical protein GCWU000342_01574 [Shuttleworthia satelles DSM
           14600]
          Length = 508

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/325 (19%), Positives = 118/325 (36%), Gaps = 31/325 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                       +     L+D ++G ++          PAS TKLMTA +     K    
Sbjct: 41  AASAAWPQEPEVQSASAVLMDLDSGEILYGKEDQTARYPASTTKLMTALLALEHSK---- 96

Query: 75  MLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES----L 127
            L   +T S +    +E   S+     G  M+++  L  +++ SAN+ A AIAE     +
Sbjct: 97  -LDETVTFSSDAVFKNETNSSHIARDVGEQMSMEQTLYGVLLASANECAYAIAEHVGADM 155

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ---- 183
                 F+Q MN+ +K LG   THF+N+ G+    HYT A D+A+++     +       
Sbjct: 156 GGDYNTFIQAMNDRAKELGCVNTHFVNSSGLHDDQHYTCAYDLALIAREAYQNETLRKMV 215

Query: 184 --------YMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQ 234
                     +               + N      + G  G KTG+T  +  ++V    +
Sbjct: 216 GTRRYEIPPTNKHAEPTPLNNTHAMLSANKTSKFLYDGCQGGKTGYTDEARHSLVTYVER 275

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV----- 289
             + L+ V + A   ++  K + +L+  G  N       +  ++    + +         
Sbjct: 276 DGRKLVCVSMCAEGNDS-YKDTIALMDWGLANFHKVSLEDETLQSKVDEAIKASGRQGLS 334

Query: 290 PNISEEVCTTQKEIINYNTQMKEAK 314
                 +   +   +       E K
Sbjct: 335 WQAKGTLLLPKDAAVRDLAVKLEPK 359


>gi|71903459|ref|YP_280262.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS6180]
 gi|71802554|gb|AAX71907.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS6180]
          Length = 451

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 42  IKRWVILFFMVLTCSGFGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 101

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 102 LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 161

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 162 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDNRYPGSALEE 221

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 222 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 281

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 282 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVDRTYCRRKIL 341

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 342 KKGSLVLERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 401

Query: 328 LL 329
           ++
Sbjct: 402 VV 403


>gi|94988566|ref|YP_596667.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS9429]
 gi|94992388|ref|YP_600487.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS2096]
 gi|94542074|gb|ABF32123.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS9429]
 gi|94545896|gb|ABF35943.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS2096]
          Length = 451

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 42  IKRWVILFFMVLTCSGFGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 101

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 102 LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 161

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 162 SNSAAIALAEKVAGSEPHFVNQMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSTLEE 221

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 222 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 281

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 282 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCCRKIL 341

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 342 KKGSLVSERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 401

Query: 328 LL 329
           ++
Sbjct: 402 VV 403


>gi|307703815|ref|ZP_07640756.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           oralis ATCC 35037]
 gi|307622650|gb|EFO01646.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           oralis ATCC 35037]
          Length = 405

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 136/358 (37%), Gaps = 31/358 (8%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + + +        +        +   ++  TG ++ E   + P   AS+TKL+T Y+V+ 
Sbjct: 1   MTLLVFGTASTVSAQEFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKLVTVYLVYE 60

Query: 68  FLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
            L++    L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+A
Sbjct: 61  ALEQGTISLSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATMVSSANSAAIALA 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDM 170
           E +  +EK FV  M       G+     +N  G+                  +  +A D+
Sbjct: 121 EKIAGSEKDFVDKMRAKLLEWGIQDATIVNTTGLNNETLGDNIYPGSKKDDENKLSAYDV 180

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGF 226
           AI++  +  D+PQ +   +       G +  +TN+ +        G DG+KTG T  +G 
Sbjct: 181 AIVARNLIRDYPQVLEITKKPTSTFAGLEIHSTNYMLEGMPAYRGGIDGLKTGTTDKAGA 240

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYI------ 276
           + V + ++    +I V+L A     +   R   +++LL     N   +  +         
Sbjct: 241 SFVGTTVEKGMRIITVVLNADQQDTNPYARFTATSALLDYISANFALKTVVQKGEAYNDS 300

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                     N       ++   Q+        ++      S     E+  ++     
Sbjct: 301 KVTVLDGKEDNVTAVAKSDISIVQRIGSGTTPALQFTPKSTSEMAPLEEGKVVGTLTY 358


>gi|163868321|ref|YP_001609530.1| penicillin-binding protein [Bartonella tribocorum CIP 105476]
 gi|161017977|emb|CAK01535.1| penicillin-binding protein [Bartonella tribocorum CIP 105476]
          Length = 387

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 81/345 (23%), Positives = 147/345 (42%), Gaps = 12/345 (3%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + L+ +   +  N +   +           LLD NT  ++ E      + PASL KLMTA
Sbjct: 6   RILLSLWGILAFNTW-GRAQDFQISASQVLLLDDNTETILYEKQECTSFFPASLVKLMTA 64

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAN 117
            VVF  LKE     T    +S+NA          +    K  + + + + L+ LI+ + N
Sbjct: 65  EVVFHQLKEGLLKNTQKFKVSENAWRKGGAPSGTTTMFAKIKTEINISDLLRGLIIVNGN 124

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D A+ +AE +   E  F Q MN  +K +GLS +HF+NA G+ + G + TARDM IL+  I
Sbjct: 125 DAAIILAEGISGDEDHFAQLMNQRAKIIGLSQSHFVNATGLPEEGQFVTARDMIILARHI 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             ++P Y   ++            N N  +   +G +G  +G++   GF++VA+  +  +
Sbjct: 185 VQEYPDYYALYREPHFTWNNIFQRNKNPLIFKEIGVEGFGSGYSEKEGFSMVATIYKNHR 244

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNIS 293
            L   I G  D          +L  G      +       +      Y    +     + 
Sbjct: 245 RLFLAINGLQDGKKHTTEIERILQWGITAFDLKTIFTKGERVGLASVYGGKKNFVPLIVK 304

Query: 294 EEVC--TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           + +    + ++ +N   ++K     ++  +  + + +++    KK
Sbjct: 305 KPISFMLSNEKGVNVKAKIKYHGPLKAPIVSGQSVGVIQILEDKK 349


>gi|30261566|ref|NP_843943.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Ames]
 gi|47777937|ref|YP_018113.2| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184396|ref|YP_027648.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|170706241|ref|ZP_02896702.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|229603016|ref|YP_002865975.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
 gi|30255420|gb|AAP25429.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           Ames]
 gi|47551642|gb|AAT30588.2| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178323|gb|AAT53699.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|170128775|gb|EDS97641.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|229267424|gb|ACQ49061.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
          Length = 374

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 135/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K + +  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIRMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKEIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 327


>gi|19746044|ref|NP_607180.1| D,D-carboxypeptidase, penicillin-binding protein [Streptococcus
           pyogenes MGAS8232]
 gi|19748212|gb|AAL97679.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes MGAS8232]
          Length = 411

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 146/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++++ ++  + +  +      L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 2   IKRWAILFFVVLACSGLGKTVLAADFQVGAEHAIVVEVDSGRVLYEKDAKTPDAIASLTK 61

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +   +  L+  + +S  A         ++      T ++ + L+  +V S
Sbjct: 62  LVTAYLVLDKVNSGQLQLSDQVNLSDYAFELTTDSSLSNVPFDQKTYSVQDLLEATLVAS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M       G+++   +NA G+                 
Sbjct: 122 SNSAAIALAEKVAGSEPNFVAQMRAQLSRWGITSGKILNASGLPNEVLKDHRYPGSALEE 181

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+K
Sbjct: 182 ENMLSAQDVAIVTMHLLEDFPEILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLK 241

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 242 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 301

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 302 KKGSLVLERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 361

Query: 328 LL 329
           ++
Sbjct: 362 VV 363


>gi|146296850|ref|YP_001180621.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410426|gb|ABP67430.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 377

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 85/351 (24%), Positives = 136/351 (38%), Gaps = 31/351 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +    ++ + +   I  + +                   ++  TG ++ E   D     A
Sbjct: 4   KIKFSVLLVIVSLRILSYSNECYAGLKCDIQVTAKSAIAIEWITGKILFEKNKDLKLPMA 63

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S TK+MTA +           L   I I   A   P S+   +KG  + +   L  L++ 
Sbjct: 64  STTKIMTAILAIENCD-----LNKEIEIPAQAIGVPGSSIYLEKGERLKIIELLYGLMLA 118

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND A A+A S+C   KKFV  MN  +K LGL  T F + HG+ +  HYTTA D+A L+
Sbjct: 119 SGNDAAAALAISVCGDVKKFVNLMNKKAKELGLENTMFSSPHGLEEGEHYTTAHDLARLT 178

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKK------YPNTNWAVGTFLGADGMKTGFTCASGFNI 228
                    +         EI+           N N  + ++ GA+G+KTGFT  +G  +
Sbjct: 179 AY-AMKNQTFREIVSTTQKEIRWTTRPYSRVLKNKNKMLKSYQGAEGVKTGFTKRAGRCL 237

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK----INYIIKDFYQQN 284
           V SA + D  +I V+L A D       +  +L   + N    K     I Y+     ++N
Sbjct: 238 VTSACRDDFRVICVVLNAPD---MWNDTKKILDFAYQNYKILKIARGEIGYLRVKDSKEN 294

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                         T+ +    N  + +           +K T +     K
Sbjct: 295 WIKLGITEQNIFVLTKDQYPGLNVVISK-----KVSAPVKKYTEVGKLEIK 340


>gi|225570667|ref|ZP_03779690.1| hypothetical protein CLOHYLEM_06767 [Clostridium hylemonae DSM
           15053]
 gi|225160494|gb|EEG73113.1| hypothetical protein CLOHYLEM_06767 [Clostridium hylemonae DSM
           15053]
          Length = 405

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 137/371 (36%), Gaps = 47/371 (12%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLSIAE----------TNKLPYYTLLDTNTGHVIAENYPD 48
           M++  +++ + M ++ + FP    A                   L+D ++G V+     D
Sbjct: 1   MKKKYWILGMIMTIVFSAFPSTGTAAGDGDIPEELSQLYARSAVLMDADSGRVLFGKDED 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS TK+MT  +    ++E           S +A+  P      K      + + L
Sbjct: 61  VVRPMASTTKIMTCILALENMQE-----DQVTAASDHAASQPKVRLGVKGKEEFRIKDLL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HY 164
             L+++S ND AV IAE +  + + F   MN  +  LG S T+F+  +G+  +     H 
Sbjct: 116 YSLMLESHNDSAVVIAEGIAGSVEAFAGMMNEKAAELGCSDTYFVTPNGLDGYDEGGTHS 175

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLE---------IKGKKYPNTNWAVGTFLGADG 215
           TTARD+A +      D P+   + ++   +          +     N N  +    GA  
Sbjct: 176 TTARDLAAIMKYCIKDSPKKEQFLEVTRTKDYSFTNVKGDRSFSCSNHNAFLTMMDGALS 235

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKK 272
            KTGFT  +G+  V +  +  ++ I  +L     N    + K +  L+  G  N   +  
Sbjct: 236 GKTGFTADAGYCYVGALERDGRTFIVALLACGWPNNKGYKWKDTRKLMEYGVANYEYQTV 295

Query: 273 --------------INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
                         I    +      +  ++ +  +E     +E    +      K   +
Sbjct: 296 WQDMKLKDVNAERGIEKGNEFGGDAKIPVKIADADKEFKVLLREGEKVDITCDVKKKLAA 355

Query: 319 HFIDFEKITLL 329
              +  K+  +
Sbjct: 356 PVEEGTKVGTV 366


>gi|163939795|ref|YP_001644679.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|229132823|ref|ZP_04261668.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-ST196]
 gi|163861992|gb|ABY43051.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|228650650|gb|EEL06640.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-ST196]
          Length = 317

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 12/262 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI +N  +    PAS++K+MTAY+V   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAIIIDASNGEVIYQNNENEAVAPASMSKMMTAYLVLESIHNGKVH 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ IS  +++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKISAKSAQTEGAKIPMQANDTLTVKDLYHALMIESANNSAVALAEHVAKTEKNFV 172

Query: 136 QHMNNTSKNLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D++ L++ +  D+P+ +    ++
Sbjct: 173 QLMNEKAKQLEMSDKAKFANASGLQEPDGSETKMTAADVSKLAYHLIKDYPEILEVTHLR 232

Query: 192 GLE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             +            +  N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVTNTNEMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDNRVITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           +G   +  R   +  L+S  F 
Sbjct: 293 MGTKSKTKRFTETNKLMSYAFQ 314


>gi|142817|gb|AAA22375.1| penicillin binding protein 5 [Bacillus subtilis]
          Length = 396

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 69/338 (20%), Positives = 130/338 (38%), Gaps = 38/338 (11%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPP 91
            ++G ++     D     AS+TK+MT Y++   + + K            + + + +   
Sbjct: 1   ASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSL 60

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           SN   +K    T+    +   + SAN  A+AIAE +  +E KFV+ MN  +K LGL+   
Sbjct: 61  SNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYK 120

Query: 152 FMNAHGVVQHGHY--------------TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           F+NA G+     +               +A+DMA+L+  + TD+P+ +    I   + + 
Sbjct: 121 FVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFRQ 180

Query: 198 -----KKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                   PN N+              DG+KTG T ++G     +A +    +I V+L A
Sbjct: 181 GTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNA 240

Query: 247 LD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY-------QQNLSNEVPNISEEVC 297
                  R   +  +    F N + ++      +          +          ++   
Sbjct: 241 KGNLHTGRFDETKKMFDYAFDNFSMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFS 300

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              K     N + K   +K++     +K T +     +
Sbjct: 301 LPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAE 338


>gi|312793435|ref|YP_004026358.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180575|gb|ADQ40745.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 451

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 140/349 (40%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+++      +      +           L++ +TG ++ E  P+    PAS TK++TA 
Sbjct: 19  FVILFTYPFYTYSQQESNDKLGLSAKSAILVEAHTGQILFEKNPNLRCFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L+    +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----DLSKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++  +  +FV+ MN  +K++G   +HF+N +G+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENIAGSIPEFVEKMNEYAKSIGAENSHFVNPNGLHSPQHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         +   +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 ILKKIFSTVEYRITTASMHKKPDWQIIYNINKLLRKNSQYYYPYATGIKTGYTAQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + D  LIAVIL           +  L   GF N    K  +              
Sbjct: 255 IASAKKNDIELIAVIL---SSEDAFSDAIKLFDYGFNNFKREKLFSENQIVGKVLIDKTN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMK-----EAKDKESHFIDFEKITLLKNK 332
              +   +      + N  +  +          +   I   K T++ N 
Sbjct: 312 QKWLDGYLKAPVYVLQNVYSPAESNFTYTVDFLKDLKIPIYKDTVIGNV 360


>gi|182414513|ref|YP_001819579.1| Serine-type D-Ala-D-Ala carboxypeptidase [Opitutus terrae PB90-1]
 gi|177841727|gb|ACB75979.1| Serine-type D-Ala-D-Ala carboxypeptidase [Opitutus terrae PB90-1]
          Length = 341

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 19/277 (6%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++   ML+   P  +           + D  TG+V+ E   D    PAS+TKLMT  V+ 
Sbjct: 16  VMLTPMLALAAPKKAPKAEPTFKGAIVTDAATGNVLLEQNADVVTPPASMTKLMTFAVLS 75

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             LK     L T + I    +    +        + T++  +  ++++SAND + A+A  
Sbjct: 76  DKLKSGALTLGTVVQIEPEDARMGGTQVFLDPRESFTVEELIYAMMIQSANDASYALARV 135

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------QHGHYTTARDMAILSWRIKTD 180
              +   FV+ MN  ++ LG++ T F + HG+         G  TT RD + L   +  +
Sbjct: 136 SAGSVPAFVELMNAKARELGMTQTTFRSPHGLPPKSRRVSEGDLTTPRDFSRLCRHLLLN 195

Query: 181 FPQYMHYFQIKGLEIK-----GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
               + Y  +K           ++  N N  +G   G DG+KTG+T  +G+ + A+A++ 
Sbjct: 196 TDV-LKYSSVKHRVFGPQRATPQQMKNHNNLLGKVAGVDGLKTGYTEGAGYCLSATALRN 254

Query: 236 DQSLIAVILGALDRN-------TRNKVSASLLSMGFY 265
           D+ +I VI+GA   N       +R++ +  LL  GF 
Sbjct: 255 DRRVIVVIMGAFGPNGQKDLGRSRDRKTIELLERGFA 291


>gi|134299463|ref|YP_001112959.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
 gi|134052163|gb|ABO50134.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfotomaculum reducens
           MI-1]
          Length = 388

 Score =  157 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 78/335 (23%), Positives = 131/335 (39%), Gaps = 30/335 (8%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                K    +L++  +G V  E   D    PASLTK+MTA +       K         
Sbjct: 31  KPPKVKASAASLMEVESGKVYFEKDGDKRREPASLTKVMTAILAIEKGNLK----DVVTV 86

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
             + A      +     G  + L++ LK  ++ SAND  VAI E +  +  +FV+ MN  
Sbjct: 87  QQRAARVSMGQDIGLNIGDRLYLEDLLKAALMYSANDSTVAIGEHIGGSHDQFVKMMNEK 146

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR-------------------IKTDFP 182
           +  LGL  THF N +G     HYTTA D+A L+                           
Sbjct: 147 AVALGLKNTHFANTNGFHHPNHYTTANDLAKLTCYALQNKTFAEFVRTKEATITWLPKET 206

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                 + +   +K +   NTN  + +   G +G+KTG T  +G  ++ASA +  + L+ 
Sbjct: 207 AVKTGKKSEAETVKQRVLRNTNRLLRSDFEGINGVKTGTTPRAGNCLIASATREGRQLVV 266

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD---FYQQNLSNEVPNISEEVCT 298
           VIL +   N R   +  LL  GF        +            + + N++  ++ +   
Sbjct: 267 VILHS---NNRWNDATRLLEYGFNEVKPVVLVEKDEVLSTMPVLEGVENKITLVTAKKLE 323

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                ++ +   ++   K +     ++ T L   I
Sbjct: 324 VYVPSVDMDKIERKIHLKPTPMAPVKQGTKLGQAI 358


>gi|312876048|ref|ZP_07736037.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797246|gb|EFR13586.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 451

 Score =  157 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 140/349 (40%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+++      +      +           L++ +TG ++ E  P+    PAS TK++TA 
Sbjct: 19  FVILFTYPFYTYSQQESNDKLGLSAKSAILVEAHTGQILFEKNPNLRCFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L+    +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----DLSKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++  +  +FV+ MN  +K++G   +HF+N +G+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENIAGSIPEFVEKMNEYAKSIGAKNSHFVNPNGLHSPQHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         +   +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 ILKKIFSTVEYRITTASMHKKPDWQIIYNINKLLRKNSQYYYPYATGIKTGYTAQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + D  LIAVIL           +  L   GF N    K  +              
Sbjct: 255 IASAKKNDIELIAVIL---SSEDAFSDAIKLFDYGFNNFKREKLFSENQIVGKVLIDKTN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMK-----EAKDKESHFIDFEKITLLKNK 332
              +   +      + N  +  +          +   I   K T++ N 
Sbjct: 312 QKWLDGYLKAPVYVLQNVYSPAESNFTYTVDFSKDLKIPIYKDTVIGNV 360


>gi|47569141|ref|ZP_00239829.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
 gi|47554212|gb|EAL12575.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
          Length = 374

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLFIVYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDIVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF        +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTNVVGRGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +   D  K+  
Sbjct: 292 KNSFAVPLTEQERKDVVLKVELDKSAKLKDGVKVGK 327


>gi|94990442|ref|YP_598542.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10270]
 gi|94543950|gb|ABF33998.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10270]
          Length = 451

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 42  IKRWVILFFMVLTCSGFGKTVLAADFQAGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 101

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 102 LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 161

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 162 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDNRYPGSALEE 221

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 222 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 281

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 282 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 341

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 342 KKGSLVSERSLPIQDGQVKELPISVAEDVTIILQQDEQVPKPKQFMISETSLLAPITKGE 401

Query: 328 LL 329
           ++
Sbjct: 402 VV 403


>gi|229017289|ref|ZP_04174193.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH1273]
 gi|229023465|ref|ZP_04179962.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH1272]
 gi|228737818|gb|EEL88317.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH1272]
 gi|228743990|gb|EEL94088.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH1273]
          Length = 317

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 12/271 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++   +   + P   I          ++D + G VI +N  +    PAS++K+MTAY+V 
Sbjct: 44  LLKTGLSEKVVPPKYIPPEIDAKAAIIIDASNGEVIYQNNENEAVAPASMSKMMTAYLVL 103

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             +   K     P+ IS  +++   +    +   T+T+ +    L+++SAN+ AVA+AE 
Sbjct: 104 ENIHNGKVHWEDPVKISAKSAQTEGAKIPMQANDTLTVKDLYHALMIESANNSAVALAEH 163

Query: 127 LCKTEKKFVQHMNNTSKNLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFP 182
           + KTEK FVQ MN  +K L +S    F NA G+          TA D+A L++ +  D+P
Sbjct: 164 VAKTEKNFVQLMNEKAKQLEMSDKAKFANASGLQEPDGSETKMTAADVAKLAYHLIKDYP 223

Query: 183 QYMHYFQIKGLE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
           + +    ++  +            +  N N       G DG+KTGFT ++G+    +A Q
Sbjct: 224 EILEVTHLRQSQLAFNNVNVTNTNEMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQ 283

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           GD  +I V++G   +  R   +  L+S  F 
Sbjct: 284 GDNRIITVVMGTKSKTKRFTETNKLMSYAFQ 314


>gi|229011286|ref|ZP_04168478.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus mycoides DSM
           2048]
 gi|228749942|gb|EEL99775.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus mycoides DSM
           2048]
          Length = 317

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 12/262 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI +N  +    PAS++K+MTAY+V   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAIIIDASNGEVIYQNNENEAVAPASMSKMMTAYLVLESIHNGKVH 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ IS  +++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKISAKSAQTEGAKIPMQANDTLTVKDLYHALMIESANNSAVALAEHVAKTEKNFV 172

Query: 136 QHMNNTSKNLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNEKAKQLEMSDKAKFANASGLQEPDGSETKMTAADVAKLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNVNVTSTNEMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           +G   +  R   +  L+S  F 
Sbjct: 293 MGTKSKTKRFTETNKLMSYAFQ 314


>gi|237747199|ref|ZP_04577679.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes HOxBLS]
 gi|229378550|gb|EEO28641.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes HOxBLS]
          Length = 383

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 16/335 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT--KLMTAYVVFSFLKEKK 73
                  +       + L+D  +  V+A    D     AS T  KLMTAY+VF  L++ +
Sbjct: 20  AHSVSLPSPNLAARSWLLMDVVSNQVLASKNADDR--IASRTASKLMTAYLVFGALRDGR 77

Query: 74  AMLTTPITISKNASE--YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
             L  PI +S+  +           + G T T+   L  LIV+  +D A+A+A ++   E
Sbjct: 78  VSLDQPIVVSEQVARLGTGGPEMFLQNGGTATVRELLLGLIVRGGDDAALALAIAVSGDE 137

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           K FV+ MN  +  LG+ +T F + +G      Y+T  DMA+L+  +  DF  Y  +F  K
Sbjct: 138 KTFVELMNREAVRLGMKSTLFAHPYGSSGKEGYSTPSDMAVLALGVMRDFSDYSSFFSTK 197

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG----DQSLIAVILGAL 247
                G +  N N  +      DG+    +    + ++ASA +     ++ +++++ GA+
Sbjct: 198 EFSYNGIRMRNGNRLLWLDGAVDGLFATNSPEESYTLLASAKRDSVLGERRMLSIVTGAV 257

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE--VCTTQK 301
               R + S  LL+ GF N    +           + ++ +        + +  +   + 
Sbjct: 258 SDQARMQESLKLLNWGFQNFDMIRLFEKNQIVATPEVWKGSSGKVEVGFNNDTFISVPKG 317

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +    + +       +   +  +I +LK  +  K
Sbjct: 318 AVSRMKSVLVRNDPLIAPIDEGSRIGILKIVVDDK 352


>gi|319939695|ref|ZP_08014054.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus anginosus
           1_2_62CV]
 gi|319811284|gb|EFW07590.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus anginosus
           1_2_62CV]
          Length = 415

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 150/366 (40%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++F++ +   +L  + P + +        +   +D  TG ++ E   + P   AS+TKL
Sbjct: 3   MKKFIITLVTTLLIFLAPTVLADNFEVGAKHAIAVDVATGKILYEKDANQPVEIASITKL 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  + + K  L T + IS    +      +++   +    T++  L+  ++ SA
Sbjct: 63  LTAYLVYEAIHQGKFTLQTSVDISDYPYQLTVNSDASNVPLEARKYTVEELLETSLIASA 122

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---------------H 161
           N  A+A+AE +  +EKKFV  M    +  G+  T  +NA G+                  
Sbjct: 123 NSPAIALAEKVAGSEKKFVDLMKAKLQQWGIKGTTIINASGLNNSVLGEEHIYPSSGKED 182

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMK 217
            +  +A D+AI++ R+  D+P+ +   Q       G    ++N  +        G DG+K
Sbjct: 183 ENKMSAHDVAIIARRLILDYPEVLEITQKATSNFAGMTLTSSNHMLENMPAFRAGVDGLK 242

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           TG +   G + V +  Q    LI V+L       D N R   ++  ++  +   T +  +
Sbjct: 243 TGSSDKGGSSFVGTIQQRGMRLITVLLNVDHADEDENARFTATSRFMTYIYQQFTVQTLV 302

Query: 274 NYIIK-----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             +EV  ++ E  T  +   +    +    DK  +    +K  +
Sbjct: 303 KKGEAYNKSSARVINGQKDEVTAVASEKLTIVRRYNHKKPTVHFTTDKNGYPTPLKKGVI 362

Query: 329 LKNKIT 334
           +     
Sbjct: 363 VGKLTY 368


>gi|306827400|ref|ZP_07460687.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus pyogenes
           ATCC 10782]
 gi|304430547|gb|EFM33569.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus pyogenes
           ATCC 10782]
          Length = 442

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 148/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++++++  M +  + F    L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 33  IKRWVILFFMVLTCSGFGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 92

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 93  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 152

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 153 SNSAAIALAEKVAGSELHFVNQMREQLSHWGITSGKILNASGLPNEVLKDNRYPGSALEE 212

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 213 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 272

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 273 TGTTDLAGHCLVVTSIENGMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 332

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 333 KKGSLVSERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKSKQFMISETSLLAPIAKGE 392

Query: 328 LL 329
           ++
Sbjct: 393 VV 394


>gi|320354031|ref|YP_004195370.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfobulbus propionicus
           DSM 2032]
 gi|320122533|gb|ADW18079.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfobulbus propionicus
           DSM 2032]
          Length = 374

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 8/256 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                +S           +++ ++G V+ E+  D    PAS+ KLM  YV+   +++   
Sbjct: 23  TPLAVISQDPYV---SALVIEADSGKVLFESNADVKVYPASVLKLMDLYVILDRIEQGAL 79

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   + ++  AS+   S          +++  +  L+V+SAND AVA+A  +  +++ F
Sbjct: 80  KLDEMVPVTVEASKTGGSQVYLDPKEQFSVEELIYALMVQSANDAAVALATHIAGSKEGF 139

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFP-QYMHYFQ 189
           V  MN  ++ LG+  + F + HG+          TTARD+AIL   +            Q
Sbjct: 140 VALMNQKAQALGMKHSVFHSVHGLPPSEGQEPDVTTARDLAILCRELAKRPEALKYTGTQ 199

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +G         N N  +    G DG KTG+  A+GF+I A+A +G   +I +++G+ DR
Sbjct: 200 TRGFREDKFIMRNHNKLLTQVPGCDGFKTGYYQAAGFSIAATAKKGGVRIITLVMGSKDR 259

Query: 250 NTRNKVSASLLSMGFY 265
             R+  +  LL+ GF 
Sbjct: 260 KVRDAKAVELLAKGFA 275


>gi|238917952|ref|YP_002931469.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium eligens ATCC
           27750]
 gi|238873312|gb|ACR73022.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium eligens ATCC
           27750]
          Length = 464

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 103/263 (39%), Gaps = 19/263 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A         L+D +TG ++ E        PAS TK++T  +           +   +
Sbjct: 53  PDAPEVNSSSCILVDADTGSILFERNSHEKCYPASTTKILTGLLTIENC-----NMDDVV 107

Query: 81  TISKN----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           T S+      + Y  +N   K G   T++  L  L++ SAN++A A+ E +  +   FV 
Sbjct: 108 TFSQAAATSINIYEDANLGCKVGEQFTVNQLLHGLLLYSANEMAYALGEHVAGSIDAFVD 167

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----------FPQYMH 186
            MN  +K LG   THF NA G+    HYTTA DMA+++     +              + 
Sbjct: 168 MMNAKAKELGALNTHFANASGLYNTNHYTTAYDMAMIARGCYNNASFVSIDSTADAYVIP 227

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              +        ++         +    G KTG+T  S   +V  A +    LI V+   
Sbjct: 228 ATNMSAQRTIRHRHKMLKGRSYYYEYCKGGKTGYTDESQNTLVTFAEKDGMRLICVVFKE 287

Query: 247 LDRNTRNKVSASLLSMGFYNKTD 269
              + R   + +L   GF N   
Sbjct: 288 ATDDLRYTDTKTLFDWGFSNFQK 310


>gi|229155136|ref|ZP_04283248.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228628263|gb|EEK84978.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
          Length = 378

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 134/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 5   MRRICVIITLFIVYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDIVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF        +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTNVVGQGALAEITEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 296 KNSFAVPLTEQERKNVVLKVELDKSAKLKDGVKVGK 331


>gi|306820946|ref|ZP_07454566.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551060|gb|EFM39031.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 434

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 34/340 (10%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            +             ++++ TG ++ +        PAS TK+MT  +           L 
Sbjct: 26  AYDIKPSDIVCKSAVVIESETGKILFDKNAKQKAFPASTTKIMTGLLAIEN-----LDLE 80

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             IT+ ++      S+     G T  +   ++ +++ SAND  V +A  +  +   FVQ 
Sbjct: 81  KSITVPEDFQLVDGSSMYLLPGETFKVRELIQAVLIHSANDACVLLAIEISGSVDSFVQL 140

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ------IK 191
           MN  +  LG + THF+N HG+    HYTTA DMAI++     +        Q        
Sbjct: 141 MNQKAAELGATNTHFVNPHGLHDDNHYTTAYDMAIIAREAMKNDEFRKIVGQSSLILPET 200

Query: 192 GLEIKGKKYPNTNWAVG--------------TFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               + + Y NTN  +                +   DG+KTG+T   G  +VAS I+ D 
Sbjct: 201 PKTPEKRIYNNTNRFLWSNSEIIYKNQYIPIKYDIIDGIKTGYTLEGGNCLVASGIKNDM 260

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE--- 294
            LI+V+  +       + S  +L  GF N + +  I    +    +N+ N +    +   
Sbjct: 261 RLISVVYNSNGFE-MYRDSRIILDYGFDNFSVQNIITAG-EVLGSENIKNSIQEKVDFAI 318

Query: 295 --EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +V    K+  +   +     +     +  +K   +   
Sbjct: 319 MQDVSNLMKKGGSPEFEKTIKLN--EFKLPIKKGDKIGTL 356


>gi|51892127|ref|YP_074818.1| D-alanyl-D-alanine carboxypeptidase-like protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855816|dbj|BAD39974.1| D-alanyl-D-alanine carboxypeptidase-like protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 565

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 9/245 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  Y L+D  TG V++E     P   AS TK+MTA +               +T+S
Sbjct: 316 PDIAAQAYILVDVATGAVLSEYNARAPRAIASTTKIMTALLAVEQ-----GHPDAVVTVS 370

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            NA+  P ++   + G   TL   L  L++ S ND AVAIAE L  +E+ F + MN  + 
Sbjct: 371 ANAASQPGTSVYLRAGEQRTLRELLYGLMLVSGNDAAVAIAEHLAGSEEAFARRMNLRAA 430

Query: 144 NLGLSATHFMNAHGVVQHGH-YTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGKK 199
            LG   T+F+ A G+    + Y+TA D+A +S     +                    ++
Sbjct: 431 ELGAQNTYFVTASGLDDDVNPYSTAEDLARISLASLRNPLFRSYMYLPQATIPGLWGNRQ 490

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N+N  V  + GA G+K G+T  +G+ +VASA +  + ++ V+LG   R+     + SL
Sbjct: 491 LTNSNLFVLRYPGATGVKNGWTEKAGYTLVASAWRDGREVMLVLLGGESRSALYAEAYSL 550

Query: 260 LSMGF 264
           +  GF
Sbjct: 551 MDHGF 555


>gi|51473579|ref|YP_067336.1| D-alanyl-D-alanine carboxypeptidase. [Rickettsia typhi str.
           Wilmington]
 gi|51459891|gb|AAU03854.1| D-alanyl-D-alanine carboxypeptidase [Rickettsia typhi str.
           Wilmington]
          Length = 306

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 91/291 (31%), Positives = 141/291 (48%), Gaps = 3/291 (1%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            F+VI   A +S     +       +    ++D   G V+  +       PASLTKLMT 
Sbjct: 10  IFIVIFCFAPISEAKKIVKKTNKYPVQTSLVIDAKNGKVLQAHNAQVRIYPASLTKLMTL 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           Y++F  ++  K  L   + +S  AS+ P      + G  +T+ +A+  LI+KSAND+AV 
Sbjct: 70  YLMFEAIESGKLSLDKKLLVSAKASKMPHCKLGLRAGDNITVRDAINGLIIKSANDVAVT 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  +EK F   MN  +K LG+  T F NA G+      TTARD+A L+  +K D+P
Sbjct: 130 VAEGMKGSEKSFAHLMNVKAKTLGMKHTFFKNASGLHDPLQQTTARDIAKLAIALKRDYP 189

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
           +Y  +F       +G      N     + GA+GMKTGF   +G+N+V +A + ++SLIAV
Sbjct: 190 KYYPFFSKTSFVFRGNVINGHNSVTKHYQGAEGMKTGFHTPAGYNLVTTASRKNKSLIAV 249

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           I GA    +R++    LL     +   +             N +N      
Sbjct: 250 ITGAKSAASRDQKMIRLLDH---HFGVKTINYKPSIKLASNNKANTKAKSK 297


>gi|304406992|ref|ZP_07388646.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
 gi|304343979|gb|EFM09819.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
          Length = 406

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           + +     ++D  +G ++     D P   ASLTK+MTA V           L   + +S 
Sbjct: 47  STQAKAAAIIDVESGRLLYSKNGDEPMRIASLTKIMTAIVAIEN-----GNLADKVKVSV 101

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+    S+   + G  M L++ L  L+++S ND A AIAE +  +   FV+ MN  ++ 
Sbjct: 102 RAAGKEGSSIYLRAGEVMKLEDMLYGLMLRSGNDAATAIAEHVGGSIDGFVKMMNEKAEW 161

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----QYMHYFQIKGLEIKG-KK 199
           +GL  + FMN  G+ + GH +TA D+A L+     +            +      +    
Sbjct: 162 IGLKHSRFMNPSGLDEDGHLSTANDLAKLTAYALHNPTFAAIVKTRVKKAPNPNEQWDYS 221

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           + N N  +  + GADG+KTG+T A+   +V+SA +  Q L AV +   +         S+
Sbjct: 222 WSNKNKMLAMYEGADGVKTGYTKAALRCLVSSATRNGQQLAAVTINDRND---WADHRSM 278

Query: 260 LSMGFYNKTDRKKINYIIKDFYQ 282
           L  GF +                
Sbjct: 279 LDWGFQHYVPTVIAKQGQPISGY 301


>gi|167751641|ref|ZP_02423768.1| hypothetical protein EUBSIR_02646 [Eubacterium siraeum DSM 15702]
 gi|167655449|gb|EDR99578.1| hypothetical protein EUBSIR_02646 [Eubacterium siraeum DSM 15702]
          Length = 390

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 21/322 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++ +TG V+           AS TK+MTA +     +           +  
Sbjct: 42  DVSAACAILIEADTGTVLFSKNEKEHRQIASTTKIMTALLTLEAGE-----PDKEFEVDP 96

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A +   ++   ++G  +T       +++ S ND A A A ++  ++  F   MN  ++ 
Sbjct: 97  TAIKVEGTSMGLREGDIVTRRALCYGMLLPSGNDAANAAAVNISGSKSAFAVLMNKRAEE 156

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-GLEIKGKK---- 199
           +G++ T+F+   G+   G Y+ A D+A+L+     +          K  +     K    
Sbjct: 157 IGMTDTNFVTPSGLDADGQYSCAYDLALLTREAMNNKDFAKICGLPKAKVSFGNPKSDRI 216

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N+N  + ++ G  G+KTGFT ++   +V+ A +    LIAV L A +        A +
Sbjct: 217 LVNSNKLLTSYDGCIGVKTGFTDSARRTLVSCAERDGVRLIAVTLNAPND---WSDHAKM 273

Query: 260 LSMGFYNKT------DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           L  GF   T      D   ++  +    ++ +  E   +   +C  QK+ I     M   
Sbjct: 274 LDYGFEKVTLCEMKYDSSALSLSVVGSEKETVGVECGTVKLPLCNEQKDKITAEIYM--P 331

Query: 314 KDKESHFIDFEKITLLKNKITK 335
           K   +     EK+  +   +  
Sbjct: 332 KFIYAGLAAGEKVGEIHYLLNG 353


>gi|312127658|ref|YP_003992532.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777677|gb|ADQ07163.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 374

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 20/341 (5%)

Query: 2   RQFLVIIAMAMLSNI-----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           R F+++ A+ + +                        ++  TG ++ E   D     AS 
Sbjct: 4   RAFVLVFALIITTTFGKICYANEKKNLPQVSSKSAIAIEWVTGKILFEKNKDLKLPMAST 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +V              I I   A   P S+   +KG  + + + L  L++ S 
Sbjct: 64  TKIMTAILVLENCDV-----NKEIEIPLQAVGVPGSSMYLEKGEKLKIIDLLYGLMLSSG 118

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM----AI 172
           ND AVA+A +     K+FV+ MN  +K LGLS T F + HG+ Q  HYTTA D+    A 
Sbjct: 119 NDAAVALAIATAGDVKRFVKLMNKKAKELGLSNTVFSSPHGLEQGQHYTTAHDLAKLAAY 178

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                           ++        +   N N  +  + GA+G+KTGFT  +G  +V S
Sbjct: 179 AMRNPIFRQIVKTTEREVPWTTRPYNRILKNKNKMLRLYPGAEGVKTGFTKKAGRCLVTS 238

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
             + D  +I V+L A D       +  +L   + N    K +   I     +N  ++   
Sbjct: 239 VCRDDFRVICVVLNAPD---MWNDTQKILDYCYNNFKVVKLLPGEIGYAKVKNGKSDWVK 295

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +            +   +++     ++     EK  ++   
Sbjct: 296 VGTTYQCYWVVESSCLPKLEV--LLQAAEAPIEKNKVVGRL 334


>gi|291458267|ref|ZP_06597657.1| serine-type D-Ala-D-Ala carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418800|gb|EFE92519.1| serine-type D-Ala-D-Ala carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 528

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 66/327 (20%), Positives = 121/327 (37%), Gaps = 20/327 (6%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
              +    + S     +     L+D+++  V+        + PAS+TK++TA VV   +K
Sbjct: 30  IAFAAGGSWPSPPADIQSNGAILIDSDSNAVLYAKNEHEHYFPASITKVLTAVVVLEHVK 89

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                LT   + +    E   +      G  +++ + L  L++ SAND A A+AE +  +
Sbjct: 90  NLDEKLTFSSSATSGNLEANSTVIGAVPGDKLSVRDCLYSLLLHSANDCANALAEHVAGS 149

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY------ 184
            + F + MN  +  LG + +HFMN  G+    HYT+  DMA +      +          
Sbjct: 150 NEAFAELMNQKAAELGCTDSHFMNPSGLDNPEHYTSCADMAKILQYAIKNPTFRQIDSTQ 209

Query: 185 ---------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                          K   I    +         + G    KTG+T  +G  +V +  + 
Sbjct: 210 VYTHAPISKYPDIGAKENTIYAHHHMMRRAYRDFYNGVFAGKTGYTMTAGNTLVTACKRN 269

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE--VPNIS 293
           + +LI VIL           +  L    + N +              QN      +P ++
Sbjct: 270 NMTLICVILNGHHSQ--YSDTRKLFDFAYDNFSSIPISKSDSPYASLQNNLKVDGIPLVN 327

Query: 294 E-EVCTTQKEIINYNTQMKEAKDKESH 319
             E+   + + I     ++  +   S 
Sbjct: 328 ALELSIGESDHITLPKDVEFQELNSSL 354


>gi|196248748|ref|ZP_03147448.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. G11MC16]
 gi|196211624|gb|EDY06383.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. G11MC16]
          Length = 354

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 113/300 (37%), Gaps = 16/300 (5%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++ ++G ++           AS+TK+MTA +     K     L   +T+S  
Sbjct: 4   VSAKSAILIEQHSGRILFAKDAHTKRRIASITKIMTAILAIESGK-----LDDTVTVSAR 58

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S+   ++G  M L + +  L+++S ND AVAIAE +  + + FV  MN  +  +
Sbjct: 59  AVRTEGSSIYLRQGEKMKLRDLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNEKAAEI 118

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-------KGK 198
           G+  T F N HG+    ++ +      L  +      ++      K             +
Sbjct: 119 GMRDTEFANPHGLDDAENHYSTAYDMALLMQYAMKNKEFRRISGTKVYRAPAPPGEDGAR 178

Query: 199 KYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + N N  + + +    G KTG+T  +   +V +A +    L+AV L A D         
Sbjct: 179 VWRNKNKLLTSLYEYCTGGKTGYTKRAHRTLVTTASKDGIDLVAVTLDASDD---WNDHI 235

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
           ++   GF N    K     I               + ++     E      ++K    K 
Sbjct: 236 AMYEYGFSNYRIAKVSGKRIVKRISDPFYKGRLQAARDLRYPVTEKEMGELRVKVYLLKP 295


>gi|308069547|ref|YP_003871152.1| Penicillin-binding protein 5* precursor (D-alanyl-D-alanine
           carboxypeptidase) [Paenibacillus polymyxa E681]
 gi|305858826|gb|ADM70614.1| Penicillin-binding protein 5* precursor (D-alanyl-D-alanine
           carboxypeptidase) [Paenibacillus polymyxa E681]
          Length = 420

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 115/269 (42%), Gaps = 13/269 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A        +L+D  +G +I     D     ASLTK+MTA V     +     L  
Sbjct: 52  AAPPALGTHAQAASLIDVTSGRIIYSTEGDRELRIASLTKIMTAIVAIEHGR-----LQD 106

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S  A     S+   + G  M+L+N L  L+++S ND A AIAE +  TE+ FV  M
Sbjct: 107 RVKVSPTAYAKEGSSLFLQMGEQMSLENMLYGLMLRSGNDAASAIAEHVGGTEEGFVHLM 166

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG- 197
           N+ +  LGLS THF N HG+   GHY++A DMA L+     +                  
Sbjct: 167 NDKAVQLGLSHTHFANPHGLDAEGHYSSANDMARLTAYALHNPTFARIVKTELKKAPNPN 226

Query: 198 ----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                 + N N  +  + GADG+KTGFT  +   +V+SA +  + L AV L   D     
Sbjct: 227 DSWDYSWHNKNKMLRLYEGADGVKTGFTKKAFRCLVSSATRDGRQLAAVTLNDGDD---W 283

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
              A +L  GF         +        
Sbjct: 284 NDHARMLDYGFRYYPLIPITDKQQPIDGY 312


>gi|229096060|ref|ZP_04227034.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|229115016|ref|ZP_04244427.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228668432|gb|EEL23863.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228687352|gb|EEL41256.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 378

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 5   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQSSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSNSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGALAEINEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 296 KNSFSVPLTEEEKKNVVLKVELDKSAKLTDGVKVGK 331


>gi|90420704|ref|ZP_01228610.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334995|gb|EAS48756.1| D-alanyl-D-alanine carboxypeptidase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 313

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 81/248 (32%), Positives = 131/248 (52%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                        +     +LD  +G  + E+  D    PASLTK+MT Y++F  ++  +
Sbjct: 46  VGAATATPGVAEVRGESTLVLDFASGRTLYEDAADGLRYPASLTKMMTLYLLFETIEAGR 105

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             +++ + +S+NA+  PPS    K G T+ + +A + + VKSAND+A  IAE+L  +E  
Sbjct: 106 LSMSSELRVSENAASQPPSKLGLKAGETIRVADAAQAIAVKSANDVATVIAENLGGSEAD 165

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   M   ++ LG+S T F+NA G+   G  +TARDMA L   +   FP Y   F   G 
Sbjct: 166 FANAMTAKARALGMSRTRFVNASGLPDEGQISTARDMATLGRALLNRFPAYASLFTRTGF 225

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           +  G+ Y  TN  +G+  G DG+KTG+   +GF++ A+A +  + +I V++G      RN
Sbjct: 226 DYNGRHYNATNKLLGSVEGVDGLKTGYIRDAGFHLAATATRRGRRIIVVVMGGRTGRERN 285

Query: 254 KVSASLLS 261
               +L+ 
Sbjct: 286 ARVEALID 293


>gi|312793461|ref|YP_004026384.1| serine-type d-ala-d-ala carboxypeptidase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180601|gb|ADQ40771.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 387

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 79/341 (23%), Positives = 133/341 (39%), Gaps = 20/341 (5%)

Query: 2   RQFLVIIAMAMLSNI-----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           R F+++ A+ + +                        ++  T  ++ E   D     AS 
Sbjct: 17  RAFVLVFALIITTTFGKICYANEKKNLPQISSKSAIAIEWVTRKILFEKNKDLKLPMAST 76

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +V              I I   A   P S+   +KG  + + + L  L++ S 
Sbjct: 77  TKIMTAILVLENCDV-----NKEIEIPPQAVGVPGSSMYLEKGEKLKIIDLLYGLMLSSG 131

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM----AI 172
           ND AVA+A +     K+FV  MN  +K LGLS T F + HG+ Q  HYTTA D+    A 
Sbjct: 132 NDAAVALAIATAGDVKRFVNLMNKKAKELGLSNTVFSSPHGLEQGEHYTTAHDLAKLAAY 191

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                           ++        +   N N  +  + GA+G+KTGFT  +G  +V S
Sbjct: 192 AMRNPIFRQIVKTTEKEVPWTTRPYNRILKNKNKMLRLYPGAEGVKTGFTKKAGRCLVTS 251

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
           A + D  +I V+L A +       +  +L   + N    K +   I     +N  ++   
Sbjct: 252 ACRDDFRVICVVLNAPN---MWNDTRKILDYCYSNFKVVKLLPGEIGYVKVKNGKSDWVK 308

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +           +N   +++     +      EK  ++   
Sbjct: 309 VGTTYQRYWVVDLNCLPKIEV--LLQVAEAPIEKNKVVGRL 347


>gi|229166858|ref|ZP_04294605.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH621]
 gi|228616486|gb|EEK73564.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH621]
          Length = 317

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 127/262 (48%), Gaps = 12/262 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI +N  +    PAS++K+MTAY+V   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAIIIDASNGEVIYQNNENEAVAPASMSKMMTAYLVLESIHNGKVH 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ IS  +++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKISAKSAQTEGAKIPMQANDTLTVKDLYHALMIESANNSAVALAEHVAKTEKNFV 172

Query: 136 QHMNNTSKNLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNEKAKQLEMSDKAKFANASGLQEPDGSETKMTAADVAKLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNVNVTSTNEMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           +G   +  R   +  L+S  F 
Sbjct: 293 MGTKSKTKRFTETNKLMSYAFQ 314


>gi|153008237|ref|YP_001369452.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
 gi|151560125|gb|ABS13623.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum anthropi
           ATCC 49188]
          Length = 371

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 110/289 (38%), Positives = 174/289 (60%), Gaps = 3/289 (1%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
             +D  TG V  +      W PASLTK+MTAYV F  L+  +  L +P+ ++ NA++ PP
Sbjct: 29  IAVDVATGKVYQQQEAFQRWYPASLTKMMTAYVAFRALQSGQMTLDSPVRMTVNAAKEPP 88

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S   +K GS MTLD ALK+++VKSAND+AVA+AE++  TE  FVQ MN  ++ +G+  +H
Sbjct: 89  SKMGYKPGSVMTLDTALKIMLVKSANDVAVAVAEAVGGTESGFVQRMNAEAQRIGMVGSH 148

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--YPNTNWAVGT 209
           F N +G+    +YTTARD+A+L+ +++ +FPQY HYF  + ++    K    N N  +G 
Sbjct: 149 FANPNGLHNPNNYTTARDLAVLAVQLRREFPQYAHYFATEAIDPGAGKKVQANYNILLGR 208

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           + GADGMKTGF CASGFN+ +SA +  ++++A++LGA  +  R   +A L++  F     
Sbjct: 209 YDGADGMKTGFVCASGFNLASSATRNGRTVLAIVLGADRQEARAVQAAQLMTDAFRANAS 268

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
                  ++     NL+  V ++ + +C+ Q     ++ +  E K K +
Sbjct: 269 GGATLATLRPAAGGNLNQAV-DMRKAICSQQAMADRWDGRDVEGKLKIN 316


>gi|303239548|ref|ZP_07326074.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acetivibrio
           cellulolyticus CD2]
 gi|302592926|gb|EFL62648.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acetivibrio
           cellulolyticus CD2]
          Length = 416

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 8/332 (2%)

Query: 4   FLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           FLV+I + +++ I  F  S A   K     L+++  G V+ E       + +S  K+MTA
Sbjct: 12  FLVLIIIVLINGISVFAVSEAPEIKGVSAILVESKRGQVLFEKESKSRLHISSANKMMTA 71

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +    +      + TP+TISKNA+    S    + G   ++ + +  +I+ SAND A A
Sbjct: 72  LLALEKVGS---KIDTPVTISKNAAAAQGSILNLEVGGKYSIQDLVYTVILTSANDSATA 128

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +    + FV  MN+ ++ L ++ T+F N  G+     YTTA D+A+L+    ++  
Sbjct: 129 LAEYVGGDFQSFVNIMNDKARELKMTDTNFTNPTGLYDEAQYTTAYDLAVLTRFALSNPY 188

Query: 183 QYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
               +     L     K     N+N    ++ G DG KTG+        + +A + +  +
Sbjct: 189 FEHMFSSQAKLWTNQGKVEVITNSNNLFWSYNGIDGGKTGYNEVERQTAITTATRDNLRV 248

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I+++L +    +    S  LL  GF N      +               +  IS      
Sbjct: 249 ISIVLDSP-EKSVYDDSTKLLDYGFNNYKTGVLVKKDQTLKSISVGDKPIDLISPIDVYY 307

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
              I     +  + K KE   +   K  +   
Sbjct: 308 TFPIGEDYIKAIDLKLKEGIELPVLKTEVAGT 339


>gi|325290352|ref|YP_004266533.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965753|gb|ADY56532.1| Serine-type D-Ala-D-Ala carboxypeptidase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 292

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 15/252 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    L+D  TG V+ E        PAS TK+MTA +     K         +T+S
Sbjct: 49  PAITAHTAILMDAQTGEVLYERQSRKVSPPASTTKIMTAILALELSKG-----DEIVTVS 103

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A     S+    KG  + +   ++  +VKS ND  VAIAE    T   FV+ MN    
Sbjct: 104 EKAGAVGESSIYLNKGDKIKMSELIEGALVKSGNDACVAIAEQTAGTVDSFVELMNKKVL 163

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI------KG 197
            +G   THF+N +G+    HY+ A D+AI++     +  Q+    + K   I      K 
Sbjct: 164 TIGGYNTHFVNPNGLPAKNHYSCAYDLAIMARYALQN-DQFSELVKTKYASISFDEPPKI 222

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +++ NTN  + ++    G+KTG T  +G  +VASA + ++ LI V+L A D   R   S 
Sbjct: 223 EQFKNTNKLLWSYPFTSGVKTGTTNEAGKCLVASANKENRKLICVVLNAPD---RYGDSQ 279

Query: 258 SLLSMGFYNKTD 269
            L + GF N   
Sbjct: 280 KLFNWGFGNTKS 291


>gi|229074761|ref|ZP_04207780.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
 gi|228708359|gb|EEL60513.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
          Length = 378

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 84/336 (25%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 5   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQSSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSNSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGALAEINEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 296 KNSFSVPLTEEEKKNVVLKVELDKSTKLTDGVKVGK 331


>gi|42780668|ref|NP_977915.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
 gi|42736588|gb|AAS40523.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
          Length = 374

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 129/336 (38%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++      +                L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLLIMYASVIPIPTYAKMTSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF        +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTNVVGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 292 KNSFAVPLTEQERKNVVLKVELDKSAKLKDGVKVGK 327


>gi|225027210|ref|ZP_03716402.1| hypothetical protein EUBHAL_01466 [Eubacterium hallii DSM 3353]
 gi|224955470|gb|EEG36679.1| hypothetical protein EUBHAL_01466 [Eubacterium hallii DSM 3353]
          Length = 405

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 68/327 (20%), Positives = 124/327 (37%), Gaps = 16/327 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +   +       L+D +   V+     +     AS TK+MT              L+
Sbjct: 49  SAPAELSSLHAKAAILMDGDNQRVLFGKEEEKELPMASTTKIMTCLYAIEH-----GNLS 103

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +T S+ A+  P      + GS   L + L  L+++S ND+AVAIAE +  + ++F + 
Sbjct: 104 DKVTFSRRAASAPKVRLGARSGSQFLLSDLLYALMLESYNDVAVAIAEHIGGSVEQFCED 163

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD-----MAILSWRIKTDFPQYMHYFQIKG 192
           M   +++ G   T F   +G+    HYTT  D        L         +   +   + 
Sbjct: 164 MTQEARDYGCYHTSFETPNGLDSAKHYTTCHDLALLTCLALKNENFCKIIKEQSFSIKEL 223

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
              +     N N  + ++ GA G+KTG+T  +G+  V +  +    LI+V+LG+     R
Sbjct: 224 KNGQSYSLNNKNLFLTSYNGAIGVKTGYTNNAGYCFVGAVKKDGHYLISVVLGSGWYPNR 283

Query: 253 ---NKVSASLLSMGFYNKTDRKK--INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
               + +  L+  G  N   ++      I      +N       +S    T+        
Sbjct: 284 RYKWEDTKKLMDYGIKNYNKKEIPLNQGIPSKLPVKNGRKSTCTLSAPASTSLYISPTEK 343

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T+        S     +K T + + + 
Sbjct: 344 TRC-IISLSPSLTAPVQKGTAVGSVVL 369


>gi|328543015|ref|YP_004303124.1| D-alanyl-D-alanine carboxypeptidase superfamily [polymorphum gilvum
           SL003B-26A1]
 gi|326412761|gb|ADZ69824.1| D-alanyl-D-alanine carboxypeptidase superfamily [Polymorphum gilvum
           SL003B-26A1]
          Length = 314

 Score =  156 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 87/247 (35%), Positives = 134/247 (54%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
             +  +   +     ++D  +G  +     D P  PASLTK+MT Y++F  ++  +  L 
Sbjct: 68  ALVPASAEARGHAALVIDAASGAELFAANADAPRYPASLTKMMTLYLLFEAVERGELTLD 127

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           TP+ +S  A+  PP+      GST+T+  A + L V+SAND+AVAIAE L  +E  F   
Sbjct: 128 TPLAVSARAAARPPAKIGLATGSTITVREAAQALAVRSANDVAVAIAERLAGSESAFAAQ 187

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           M   +++LG+S T F+NA G+      TTARDMAIL   +K  FPQY  YF+       G
Sbjct: 188 MTAKARSLGMSRTRFVNASGLADTRQVTTARDMAILGRALKARFPQYAAYFRATSFAYNG 247

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           + +  TN  +G   G DG+KTG+   SG+N+VA+  +G +  + V++G    + R+    
Sbjct: 248 RTFEATNKLLGRVPGVDGLKTGYIGLSGYNLVATGSRGGRGFVVVVMGGKSESARDAEVT 307

Query: 258 SLLSMGF 264
            L+   F
Sbjct: 308 RLIETYF 314


>gi|226311997|ref|YP_002771891.1| peptidase S11 family protein precursor [Brevibacillus brevis NBRC
           100599]
 gi|226094945|dbj|BAH43387.1| peptidase S11 family protein precursor [Brevibacillus brevis NBRC
           100599]
          Length = 389

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 19/332 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL I  +   + +    +           L+D  +G ++           ASLTK MTA 
Sbjct: 14  FLFIQMVLTPAAVVKAAAAPPGLSAEGAALIDVESGRILYSKNGTKKMRIASLTKTMTAI 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V           L   +T+   A     S+   K G  +TL+  L  L+++S ND AV I
Sbjct: 74  VAIE-----MGKLDAQVTVPPQAVGVEGSSIYLKNGEKLTLEELLYGLMLRSGNDAAVTI 128

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           A  +  +   F   MN  +  +G+  T+F N HG+     + +  +            P 
Sbjct: 129 AMHIGGSVPGFTYLMNEKAAMIGMEYTNFTNPHGLDDSNQHYSTPEDMAKLSAYALHNPV 188

Query: 184 YMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           +      K  +I        ++  N N  +  + GADG+KTG+T  +   + +SA +  +
Sbjct: 189 FRQIVSTKVKDISWEGEQWDRRLLNKNKMLHLYNGADGVKTGYTKLAKRCLASSATRNGR 248

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN-----YIIKDFYQQNLSNEVPNI 292
            L  + L A D       SA L+  GF N   ++ +              +  ++ V   
Sbjct: 249 QLATITLNASDD---WNDSAKLMDWGFANYPLQELVKNGQEVKPDTPVTLEAGTHLVTTN 305

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
           + +      EI   + ++   +   +  ++ +
Sbjct: 306 AFQYPLQTAEIEAIHKRVVMGESTVTSKMNGQ 337


>gi|223933668|ref|ZP_03625645.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus suis
           89/1591]
 gi|330833493|ref|YP_004402318.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus suis ST3]
 gi|223897661|gb|EEF64045.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus suis
           89/1591]
 gi|329307715|gb|AEB82131.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus suis ST3]
          Length = 413

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 145/368 (39%), Gaps = 33/368 (8%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           MR+FL+ +   +A+     P L+   +    +   ++ ++G ++ E   +   + AS++K
Sbjct: 1   MRKFLLTLTTVIALFFTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG---STMTLDNALKLLIVKS 115
            ++ Y+V+  L + +  L T + IS        +           + ++ + L   ++ S
Sbjct: 61  TLSIYLVYEALAKGEITLDTMVDISDYPYSLTSNTELSNVNLDARSYSVRDLLNASLITS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------------- 162
           +N   +A+AE +  +E  FV  M    +  G++ T  +N  G+                 
Sbjct: 121 SNSAIIALAEKIAGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPGSSPED 180

Query: 163 -HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMK 217
            +  +A D+AI++ R+  D+PQ +    +   +  G  Y +TN  +        G DG+K
Sbjct: 181 VNMFSALDVAIIARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLK 240

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI 273
           TG + ++G + +A+  Q    +I V+L A         R   +  L++  + N +    +
Sbjct: 241 TGTSNSAGSSFLATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLV 300

Query: 274 NYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                        +           + ++   Q++  +         D +      +  T
Sbjct: 301 KKGEAFEDSKIKVFNGEKETSPVVAAADLTVVQRKQTDNVPTATFTTDIKEIDAPLKAGT 360

Query: 328 LLKNKITK 335
           L+     K
Sbjct: 361 LVSKLQLK 368


>gi|210615749|ref|ZP_03290730.1| hypothetical protein CLONEX_02948 [Clostridium nexile DSM 1787]
 gi|210150085|gb|EEA81094.1| hypothetical protein CLONEX_02948 [Clostridium nexile DSM 1787]
          Length = 413

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 136/360 (37%), Gaps = 37/360 (10%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           R  + I+  A+L  I  +      +        L+D ++G V+ E         AS TK+
Sbjct: 20  RILVFILTCALLFGITSYAKEEEPKQLYAQSAVLMDADSGRVLFEKNGYEQKAMASTTKI 79

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT  +     K         +T+S+NA+  P  +     G    L + L  L+++S ND 
Sbjct: 80  MTCILALEKGK-----PDQIVTVSENAARQPRVHLGMANGEQFYLRDLLYSLMLESHNDS 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSW 175
           AVAIAE +  T + F + MN  ++ +G   T+F+  +G+        H TTA ++A +  
Sbjct: 135 AVAIAEQVGGTVEGFARMMNEKAEKIGCKDTYFITPNGLDASDENGKHSTTAEELAKIMR 194

Query: 176 RIK---TDFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                      ++   Q +          +     N N  +G   GA   KTGFT  +G+
Sbjct: 195 YCIKLSPQKELFLEITQTQNHTFTDVEGKRQFSCNNHNVFLGMMDGALSGKTGFTGDAGY 254

Query: 227 NIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKKINY-------- 275
             V +  QG+++ I  +LG    N    + K + +L+  G                    
Sbjct: 255 CYVGALKQGERTFIVALLGCGWPNNKGYKWKDTKALMEYGLQKYEYENVFQKQDSSCIIV 314

Query: 276 ------IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                     F       ++   ++E+    KE    + +    K  ++     E +  +
Sbjct: 315 ENGIPESDDIFDVAMAETKIKTDTQELPFLLKEGETVDIKTDIKKTLKAPVQAGETVGSV 374


>gi|196230570|ref|ZP_03129432.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chthoniobacter flavus
           Ellin428]
 gi|196225500|gb|EDY20008.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chthoniobacter flavus
           Ellin428]
          Length = 355

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 11/246 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +LD  TG V+ E   D P  PAS TK+MTA +V          L   +    
Sbjct: 82  QLAAWGAIVLDELTGKVLYEKNADAPQFPASCTKIMTALLVIEE-----GDLDHEVVCDV 136

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             S+   S+   K     T    L  L++KSAND+A A+      + + F + MN  ++ 
Sbjct: 137 EDSKVGESSLNLKPDQHFTRRQMLYGLMLKSANDVAHALGRDNAGSIEAFAEKMNRRARE 196

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----KY 200
           LG   THF+N +G+    HYTT RD+A+++         +      +             
Sbjct: 197 LGAQNTHFVNPNGLHNPEHYTTPRDLALIARAAMHQPF-FRQVVGTRDYNWNVNGVVDPL 255

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +  F G  G+KTG+T  +   +V+SA++G++ +I+V++   D+      S  LL
Sbjct: 256 HNHNRLLERFPGCTGVKTGYTIPAQQVLVSSAMRGNREVISVVMHT-DKPGIWNDSMLLL 314

Query: 261 SMGFYN 266
           S G   
Sbjct: 315 SYGLDR 320


>gi|103486742|ref|YP_616303.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingopyxis alaskensis
           RB2256]
 gi|98976819|gb|ABF52970.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphingopyxis alaskensis
           RB2256]
          Length = 273

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP- 90
            L D  +G ++     D  + PAS+ K+MTAYVV   LK ++    T  T+S        
Sbjct: 1   MLKDMESGAILFSRGADKRFAPASMAKVMTAYVVLDLLKTRELRRDTTFTVSDAVWRKWN 60

Query: 91  ----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                S      G  +++D+ LK LI  SAND A  +AE +  +E+ FV+ MN  + ++G
Sbjct: 61  SSTGGSTMFLSPGEKLSVDDLLKGLITVSANDAAAVLAEGIDGSEEAFVRRMNKVAADIG 120

Query: 147 LSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYM-HYFQIKGLEIK------GK 198
           ++++HF   +G    G    +A D+  L+ R+  D P     YF I  L+          
Sbjct: 121 MASSHFGTPNGWPDGGVTKVSAADLITLADRLIRDHPDGYARYFSIPKLQHGVAPDGRPI 180

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             PN N  +    GADG+KTG T  +G+  + SA +  + LI V+ G    N R + +  
Sbjct: 181 VQPNRNPILDRVDGADGLKTGHTREAGYCFLGSAERDGRRLIMVVAGLPSANARREEAQR 240

Query: 259 LLSMGF 264
           L+  GF
Sbjct: 241 LMDWGF 246


>gi|313890311|ref|ZP_07823943.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121297|gb|EFR44404.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 404

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 134/366 (36%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIF----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ + ++ + +L+        F   A   +      ++ +TG ++ +   D     ASL
Sbjct: 1   MKKQIYLMLICILTLFPLSHPVFADQALNLRAKEAIAVEYSTGKILYQKNSDRKVPIASL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD---NALKLLIV 113
           TK+MT Y+    +   +      + +SK A++   +                  +   +V
Sbjct: 61  TKIMTIYLTLKEINSGRLKWDDSVEMSKYATDLANNPDISNPPLYKNSYSVKELVDSSMV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ------------- 160
            S+N  A+A+AE +  +E KFV  M +  K  G++    +NA G+               
Sbjct: 121 VSSNSSAIALAEKISGSEAKFVDKMKDQLKTWGITDYQLVNASGLNNSMLNGHIYPGSSK 180

Query: 161 -HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADG 215
              +  +A+ +AI+S  +  DFP+ +       +        N+N  +        G DG
Sbjct: 181 TSENRLSAKSLAIVSRHLIKDFPEILTISSQNQIYWGNDILTNSNHLLPGNTMARNGVDG 240

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKT--D 269
           +KTG T  +G   + +A+Q    +I VIL A     D N R   +  L    F N     
Sbjct: 241 LKTGTTTKAGQTYIGTAVQDKMRVIVVILNATDAPKDSNARFVEANKLFDYSFQNYQKIT 300

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ-MKEAKDKESHFIDFEKITL 328
             K           N   ++         T  + IN  T   K   +KE       K   
Sbjct: 301 IPKGKPFSTKLSISNAKQKMITFKSNRDFTVIQPINVQTIHYKIVPNKEHTTAPITKGEQ 360

Query: 329 LKNKIT 334
           L     
Sbjct: 361 LGKITL 366


>gi|300117503|ref|ZP_07055293.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus SJ1]
 gi|298725338|gb|EFI65990.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus SJ1]
          Length = 374

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            + +  LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDELDLIVVTLSASSD---WDDHMNLFDKGFDRFAQTKVLGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +  +D  K+  
Sbjct: 292 KNSFSVPLTEEEKKSVVLKVELDKSAKLVDGVKVGK 327


>gi|240144614|ref|ZP_04743215.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
 gi|257203330|gb|EEV01615.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
          Length = 468

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 129/350 (36%), Gaps = 29/350 (8%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           +M +      +         P   +++ +TG V+ +        PAS+TK+MT  +    
Sbjct: 27  SMCIPVYAAEYWPEGPEVVSPNVIVMEASTGTVLYDCDSLEAHYPASITKIMTTLIALEN 86

Query: 69  LKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                  L   +T S         S      G  MT++  L  +++ SAN+ A A+AE +
Sbjct: 87  SD-----LNDIVTFSDAAIDNTEGSGIARDYGEQMTMEQCLYAVMLASANECAYAVAEHV 141

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY--- 184
             T + FV  MN  +K LG   THF N HG+    HYT   DMA+++     +       
Sbjct: 142 GGTIENFVAMMNEKAKELGCQNTHFANPHGLHDENHYTCCYDMALIARAAYQNETFRIIV 201

Query: 185 ---MHYFQIKGLEIKGKKYPNTNWAVGT-------FLGADGMKTGFTCASGFNIVASAIQ 234
               +         +     N N  +         + G  G KTG+T A+   +V  A +
Sbjct: 202 GTARYTIPPTNKHAEQTDLQNHNEMLYPFQTNKYVYDGCTGGKTGYTNAANSTLVTYAER 261

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT-------DRKKINYIIKDFYQQNLSN 287
              +LI V++     N     S +L    F N         +    +   K+    N + 
Sbjct: 262 DGMTLICVVMNTQSPNQ-WLDSRNLFDYCFDNFQLFNIAENETNYTSAEQKNAGTLNTNE 320

Query: 288 EVPNISEE--VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              +I ++  +   +    +  T      D  +  +   + T   +++ K
Sbjct: 321 PFVDIDKDAGIVLPKTAEFSDATSKIVYDDVTNDTVGTIEYTYAGHEVGK 370


>gi|312876024|ref|ZP_07736013.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311797222|gb|EFR13562.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 387

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 79/341 (23%), Positives = 132/341 (38%), Gaps = 20/341 (5%)

Query: 2   RQFLVIIAMAMLSNI-----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           R F+++ A+ + +                        ++  T  ++ E   D     AS 
Sbjct: 17  RAFVLVFALIITTTFGKICYANEKKNLPQISSKSAIAIEWVTRKILFEKNKDLKLPMAST 76

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +V              I I   A   P S+   +KG  + + + L  L++ S 
Sbjct: 77  TKIMTAILVLENCDV-----NKEIEIPPQAVGVPGSSMYLEKGEKLKIIDLLYGLMLSSG 131

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM----AI 172
           ND AVA+A +      +FV  MN  +K LGLS T F + HG+ Q  HYTTA D+    A 
Sbjct: 132 NDAAVALAIATAGDVIRFVNLMNKKAKELGLSNTVFSSPHGLEQGEHYTTAHDLAKLAAY 191

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                           ++        +   N N  +  + GA+G+KTGFT  +G  +V S
Sbjct: 192 AMRNPIFRQIVKTTEKEVPWTTRPYNRILKNKNKMLRLYPGAEGVKTGFTKKAGRCLVTS 251

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
           A + D  +I V+L A D       +  +L   + N    K +   I     +N  ++   
Sbjct: 252 ACRDDFRVICVVLNAPD---MWNDTRKILDYCYSNFKVIKLLPGEIGYVKVKNGKSDWVK 308

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +           +N   +++     +      EK  ++   
Sbjct: 309 VGTTYQRYWVVDLNCLPKIEV--LLQVAEAPIEKNKVVGGL 347


>gi|295706466|ref|YP_003599541.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium DSM 319]
 gi|294804125|gb|ADF41191.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium DSM 319]
          Length = 382

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 69/342 (20%), Positives = 136/342 (39%), Gaps = 18/342 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +  + +  + +  + +P +S A  +       L++  +G V+     D     AS+TK+M
Sbjct: 6   KSIIYLFIVLLCLSGWPSISSAAGSVSAHSAILMEQKSGRVLYAKNADQVSRIASITKIM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +     K     +   +T+S +A     S+    +G  + L + +  L+++S ND A
Sbjct: 66  TAILAIESGK-----INKTVTVSHSAVGVEGSSVYLIEGEKIKLKDLVYGLMLRSGNDAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE++  +E  FV  MN  ++ +G++ T F N HG+  H ++ +      L  R   +
Sbjct: 121 VAIAEAVGGSEDGFVYLMNKKAEEIGMTNTTFQNPHGLDDHENHRSTAHDMALLMRYAMN 180

Query: 181 FPQYMHYFQIKGLEIKGKK------YPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAI 233
              +      K   +K  +      + N N      +    G KTG+T  +   +V +A 
Sbjct: 181 NKIFKEISGTKVYRMKHPEEKWDRVWKNKNKLLTTLYAYCTGGKTGYTKLAKRTLVTTAT 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +    LIAV + A D         S+    F         +       + +   +   I 
Sbjct: 241 KDGMDLIAVTINAPDD---WNDHISMYENAFDKYDMTSLASKGELADIKNSFYKDQLYIK 297

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             V     +    + ++K    +      +++   + N + K
Sbjct: 298 RNVVYPLTKKEQSSVEVKTTLIQ--PKKQWKETGEVPNVVGK 337


>gi|91205746|ref|YP_538101.1| penicillin-binding protein dacF precursor [Rickettsia bellii
           RML369-C]
 gi|157827127|ref|YP_001496191.1| penicillin-binding protein dacF precursor [Rickettsia bellii OSU
           85-389]
 gi|91069290|gb|ABE05012.1| Penicillin-binding protein dacF precursor [Rickettsia bellii
           RML369-C]
 gi|157802431|gb|ABV79154.1| Penicillin-binding protein dacF precursor [Rickettsia bellii OSU
           85-389]
          Length = 307

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 92/279 (32%), Positives = 137/279 (49%), Gaps = 7/279 (2%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +  L  I + +        +             +    ++D  TG V+  +       PA
Sbjct: 4   KILLPYIFVIISLLTQVSEAKKAVKNSSKVPIPVQTSLVIDAKTGKVLHAHNSQIRIYPA 63

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTKLMT YV+F  ++  K  L   + +S  A++ PP     + G T+T   A+ +LIVK
Sbjct: 64  SLTKLMTLYVMFELIELGKLSLDKKLLVSAKAAKMPPCKIGLRAGDTITTREAINMLIVK 123

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND AV +AE++  +EK F   MN  +K LG+  T+F NA G       TTARDMA L+
Sbjct: 124 SANDAAVTVAENIRLSEKDFAHLMNIKAKQLGMKNTYFKNASGWHDPLQQTTARDMAKLT 183

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             IK  FP+Y   F       +G      N     + GA+GMKTGF   +G+N+V +A +
Sbjct: 184 LAIKQKFPKYYPLFSKTSFVFRGNVINGHNKITKNYAGAEGMKTGFHTPAGYNLVTTASR 243

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
             +SLIAV+ G     +R++    LL   F   + + K+
Sbjct: 244 NGKSLIAVVTGGRSAGSRDQKMIGLLDQHFNVASAKPKV 282


>gi|150390405|ref|YP_001320454.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
 gi|149950267|gb|ABR48795.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
          Length = 377

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 78/327 (23%), Positives = 135/327 (41%), Gaps = 14/327 (4%)

Query: 12  MLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++S      + A          L+D  TG V+A          AS TK++T  +      
Sbjct: 23  LISYGLSAKNQAPHFPSSHAAILMDVETGRVLAGQNFHEKMPMASTTKILTGLLAVEN-- 80

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+++  A     S+   +    +   + +  L+++S ND A AIA  +  +
Sbjct: 81  ---LPLDKLISVNPKAVGVEGSSIYLESNERVKSIDLIYGLMLRSGNDAAEAIAYEISGS 137

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHYF 188
            + F   MN  +K +G + T+FMN HG+    HYTTA D+++++     +  F + +   
Sbjct: 138 IEDFATLMNQRAKEIGANNTNFMNPHGLHHDDHYTTAYDLSLITRAALKNVTFKEVVKTE 197

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             +      K + N N  + ++  ADG+KTG+T  SG  +VASA   +   IAV L   D
Sbjct: 198 FWQAEREGHKDFANKNKLLKSYESADGVKTGYTRRSGRCLVASATNNNMQFIAVTLNDSD 257

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
                  + +LL  GF   +  K +    K   +Q +     +I+    TT    +    
Sbjct: 258 D---FNTTRTLLEYGFETYSPFKILEQEEKLISKQVIHGLKDSINLYPATTAIIPLRDGD 314

Query: 309 QMKEAKDK---ESHFIDFEKITLLKNK 332
           + K  K     E+        T++   
Sbjct: 315 EEKLIKVLDVPETLQAPLITGTVVGKL 341


>gi|326791206|ref|YP_004309027.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
 gi|326541970|gb|ADZ83829.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
          Length = 436

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 80/365 (21%), Positives = 137/365 (37%), Gaps = 37/365 (10%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++       +I+ +     I      A   +     L+D  T  V+ E        PAS
Sbjct: 1   MKRKVYLCLSLILTLFFSCPIIQAEETAPQIEAESAILIDATTKTVLYEKNAYSKQYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLI 112
           +TKLMTA +            T  IT SK A        S+     G  +T+D AL  L+
Sbjct: 61  ITKLMTALLAIEN-----LQPTDTITFSKEAIFGIERGSSHIGMDVGEQITVDQALHGLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA- 171
           + SAN++A  +AE++  +   F   M++ +K LG   THF+N HG+    HYTTA DM+ 
Sbjct: 116 LMSANEVANGLAEAVSGSIDAFAIRMSDRAKELGALNTHFVNPHGLHDENHYTTAYDMSL 175

Query: 172 ------------ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                        +               +I+ L    K +     A        G KTG
Sbjct: 176 IASYLADNEYFLNIMKDYIYQINGTNKTDEIRYLSQDHKMFNPLKDASIFREDVIGGKTG 235

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYII 277
           +T  +   +V  A +G  +L+AV++ +  + T    + +LL  GF +         N  I
Sbjct: 236 YTDQARHTLVTIAKEGKTTLVAVVMKSE-KGTLYSDTNTLLDYGFNSYHSLALHSPNETI 294

Query: 278 KDFYQQNLSNEVP--------NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           K      + +  P         + +++    +            +  E   +  ++  ++
Sbjct: 295 KTLPLYTIKSGQPYQAGSCSIGVEKDLSVLVRNDTTLQEITTSLELPEYIDMTAKEGDVI 354

Query: 330 KNKIT 334
                
Sbjct: 355 GEITY 359


>gi|327193414|gb|EGE60313.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli
           CNPAF512]
          Length = 360

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 128/308 (41%), Gaps = 8/308 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +++ +TG V+     D  ++PASL KLMT  +VF  + + +  L T   +S+ A     +
Sbjct: 1   MIEASTGTVLLAKNEDQGFSPASLAKLMTMDLVFEAVTKGQITLDTEYPVSEYAWRTGGA 60

Query: 93  -----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                       S + +++ +K + ++ AND  + +AE +  +E++F + M   ++ +G+
Sbjct: 61  PSRTATMFAALKSRVRVEDLIKGIAIQGANDSCIILAEGMAGSEQQFAESMTRRAREIGM 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
               F N+ G+       TAR+M  L+  ++  +P    YF     E       N N  +
Sbjct: 121 DKAVFGNSTGLPDGKSKVTAREMVTLAAALQQSYPNLYPYFAQPDFEWNRIFQRNRNPLL 180

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
           G  LGADG+ TGFT   G++IVAS  +  + L   + G      R + +  +L  G    
Sbjct: 181 GLDLGADGLATGFTEGEGYSIVASVQRDGRRLFLALAGIASDKERTEEAKRVLEWGLTAF 240

Query: 268 TDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
            +R+       I         +  V  I++   +    + N +        +       +
Sbjct: 241 ENRQIFAEHEVIGAASVYGGTARTVDLIAKAPVSVYIPVSNPDRLSARIVYRWPLTAPVQ 300

Query: 325 KITLLKNK 332
                   
Sbjct: 301 PDYQAGTL 308


>gi|56420821|ref|YP_148139.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus kaustophilus
           HTA426]
 gi|56380663|dbj|BAD76571.1| D-alanyl-D-alanine carboxypeptidase [Geobacillus kaustophilus
           HTA426]
          Length = 382

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/320 (20%), Positives = 127/320 (39%), Gaps = 25/320 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++ ++G V+           AS+TK+MTA +     K     +   +T+S  
Sbjct: 32  VSAKSAILIEQHSGRVLFAKDAYTKRRIASITKIMTAILAIESGK-----MDDTVTVSAR 86

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S+   ++G  + L + +  L+++S ND AVAIAE +  + + FV  MN  +  +
Sbjct: 87  AVRTEGSSIYLRQGEKIKLRDLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNQKAAEI 146

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-------KGK 198
           G+  T F N HG+    ++ +      L  +      ++      K             +
Sbjct: 147 GMRDTEFANPHGLDDAENHYSTAYDMALLMQYAMKNKEFRRISGTKVYRAPAPPGEDGAR 206

Query: 199 KYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + N N  + + +    G KTG+T  +   +V +A +G   LIAV L A D         
Sbjct: 207 VWRNKNKLLTSLYEYCTGGKTGYTKRAHRTLVTTASKGGIDLIAVTLDAPDD---WNDHI 263

Query: 258 SLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT---Q 309
           ++   GF +      +  + ++ I   FY +     V ++   V   ++  +       +
Sbjct: 264 AMYEYGFSHYHIAKVSSERVVDKISDPFY-RGRLQAVRDLRYPVTDKEESGLRVKVYLLK 322

Query: 310 MKEAKDKESHFIDFEKITLL 329
           +++  +K       E    +
Sbjct: 323 LRKEWEKYPERAPTEVGKAV 342


>gi|21910291|ref|NP_664559.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes MGAS315]
 gi|28895868|ref|NP_802218.1| D,D-carboxypeptidase, penicillin-binding protein [Streptococcus
           pyogenes SSI-1]
 gi|21904486|gb|AAM79362.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes MGAS315]
 gi|28811118|dbj|BAC64051.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes SSI-1]
          Length = 415

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 71/362 (19%), Positives = 147/362 (40%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++++ ++  + +  +    + +A        +  +++ ++G V+ E     P   ASLTK
Sbjct: 6   IKRWAILFFVVLTCSGLSKIVLAADFQAGAEHAIVVEADSGRVLYEKDAKTPDAIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +K  +  L+  + +S  A E        +      T ++ + L   +V S
Sbjct: 66  LVTAYLVLDKVKSGQLQLSDQVNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVAS 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M     + G+++   +NA G+                 
Sbjct: 126 SNSAAIALAEKVAGSEPHFVNQMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSALEE 185

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+A+++  +  DFP+ +   +   +   G    + N  +        G DG+K
Sbjct: 186 ENTLSAQDVAVVTMHLLEDFPEILEITKQTEVNFAGNSIKSFNQLLPGMAKGRAGVDGLK 245

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    +I VIL A       NTR + +  LL         RK +
Sbjct: 246 TGTTDLAGHCLVVTSIENSMRVITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKIL 305

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                            +     +++E+V    ++        +    + S      K  
Sbjct: 306 KKGSLVSERSLPIQDGQVKELPVSVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGE 365

Query: 328 LL 329
           ++
Sbjct: 366 VV 367


>gi|255284449|ref|ZP_05349004.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
 gi|255264994|gb|EET58199.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
          Length = 403

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 132/363 (36%), Gaps = 39/363 (10%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           R+FL  ++  ++       +  E              L+D  +G ++     +     AS
Sbjct: 6   RRFLACLSALLVMMSGSAAATEEVPEELKNLYAHSAVLMDGGSGRILFGKNEEEVLPMAS 65

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MT  +     ++ +         S NA+  P  +   + G    +++ L  L+++S
Sbjct: 66  TTKIMTCILTLESGRQGEI-----AVASANAAAQPKVHLGVRTGEEFYVEDLLYSLMLES 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMA 171
            ND AV IAE +  + + F   MN  +  LG  +THF+  +G+        H TTA D+A
Sbjct: 121 HNDSAVMIAEHIGGSVEGFAAMMNEKAAQLGCVSTHFVTPNGLDATDGSGTHSTTAADLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLE---------IKGKKYPNTNWAVGTFLGADGMKTGFTC 222
            +     +  PQ   + QI              +     N N  +    G    KTGFT 
Sbjct: 181 EIMRYCVSISPQREAFLQITQTRSYSFSNVEQSRSFSCQNHNAFMDMMEGVISGKTGFTS 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTR---NKVSASLLSMGFYNKTDRKK--INYII 277
           A+G+  V +     +  I  +L     + R    + +A+LL  G  N  ++         
Sbjct: 241 AAGYCYVCALEDDGRLFIVALLACGWPDNRTWKWRDAAALLGYGKENYHNQTINCTEKPR 300

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH----------FIDFEKIT 327
               +  LS +     E V     +    + +    +D E                EK  
Sbjct: 301 TLTVEGGLSGDKNPWREAVVEAVPDTAAASGKQYLLRDGEQIRSRLTIRKGLQAPVEKGE 360

Query: 328 LLK 330
           ++ 
Sbjct: 361 VVG 363


>gi|167772310|ref|ZP_02444363.1| hypothetical protein ANACOL_03687 [Anaerotruncus colihominis DSM
           17241]
 gi|167665413|gb|EDS09543.1| hypothetical protein ANACOL_03687 [Anaerotruncus colihominis DSM
           17241]
          Length = 384

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/315 (20%), Positives = 116/315 (36%), Gaps = 21/315 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K     +LD  TG V+     +     AS TK+M+  +      +         T+  
Sbjct: 44  DTKAKAAVVLDAATGRVLFAKNANARLPMASTTKIMSTLLTLEQDGQ-----DEWFTVDP 98

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +A     S+   + G  +TL      +++ S ND A A A  +  +++ F + MN  +  
Sbjct: 99  DAIRVEGSSMGLRVGDRVTLSALAYGMMLPSGNDAANAAAVRIAGSKEAFARMMNERAAE 158

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------K 198
           LG+  +HF+   G+  + HY++A DMA+L+    ++ P++      K  ++        +
Sbjct: 159 LGMEDSHFVTPSGLDDNAHYSSAYDMALLTREALSN-PRFAEICSQKSAKVCFGNPPADR 217

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
            + N N  +  +  A G+KTGFT A+G  +V+ A +G   LI V L   D          
Sbjct: 218 WFSNHNRLLKLYPDAAGVKTGFTDAAGRCLVSYAQRGGVRLIVVTLNCPDD---WNEHIK 274

Query: 259 LLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           L    F         + I            +       E            +  +     
Sbjct: 275 LYEHYFGALTQTAPGEMIPAADLPVTGGTQTYAAVTFEEPEPVALLPGERLDVTVTAE-- 332

Query: 316 KESHFIDFEKITLLK 330
               +   +   ++ 
Sbjct: 333 -PFLYAPVQAGDVVG 346


>gi|229149767|ref|ZP_04277997.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
 gi|228633798|gb|EEK90397.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
          Length = 378

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 87/336 (25%), Positives = 135/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + M+ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 5   MRRICVIITLLMMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAESVGGSIDGFVYLMNQKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +G   LI V L A           +L   GF      K +         +         
Sbjct: 239 SKGGLDLIVVTLSASSD---WDDHMNLFDKGFDRFKQTKVLGQGAIAEINEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 296 KNSFSVPLTEEEKKNVVLKVELDKSTKLTDGVKVGK 331


>gi|169632783|ref|YP_001706519.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter baumannii SDF]
 gi|169151575|emb|CAP00352.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter baumannii]
          Length = 439

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 15/343 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTQAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +     E         +   +     D  +     ++I +L
Sbjct: 301 STLKMFKVETKQPTIVTTSLYAEP-TPIDLNTFDYATQRIQVL 342


>gi|218232835|ref|YP_002366250.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           B4264]
 gi|296502139|ref|YP_003663839.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|218160792|gb|ACK60784.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus B4264]
 gi|296323191|gb|ADH06119.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 374

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 87/336 (25%), Positives = 135/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + M+ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLLMMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAESVGGSIDGFVYLMNQKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +G   LI V L A           +L   GF      K +         +         
Sbjct: 235 SKGGLDLIVVTLSASSD---WDDHMNLFDKGFDRFKQTKVLGQGAIAEINEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 292 KNSFSVPLTEEEKKNVVLKVELDKSTKLTDGVKVGK 327


>gi|291520325|emb|CBK75546.1| D-alanyl-D-alanine carboxypeptidase [Butyrivibrio fibrisolvens
           16/4]
          Length = 463

 Score =  155 bits (391), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 70/351 (19%), Positives = 130/351 (37%), Gaps = 35/351 (9%)

Query: 1   MRQFLVIIAMAMLSN------------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           +++F+  +   +L                 +             +++  TG ++     D
Sbjct: 3   LKRFISKLLAFVLLINGLFLFNYRDVKAADYWPSGVDVTAESAIIMEQETGTILYSKNID 62

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLD 105
               PAS+TK+MTA +V    K     L   +  S  A        S+        MT++
Sbjct: 63  EVHYPASITKIMTALIVLEKCK-----LDETVKFSAEAVYGTELGSSSIARDVNEEMTVE 117

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             L  ++++SAN+ A A+ E +      FV+ MN  +K LG + THF N +G+    HYT
Sbjct: 118 QTLYGMMLESANECAYALGEHVAGDIPSFVKMMNEKAKELGCTNTHFNNTNGLPDEEHYT 177

Query: 166 TARDMAILSWRIK-------------TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
           TA DMA++S                    P    +     L    +           +  
Sbjct: 178 TAHDMALISRAAFAIPKFAEIVGTKNYTIPPTNKHADPTPLNNHHQMLHYYKSNKYIYDY 237

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
             G KTG+T  +G  +V  A +   +LI V++       +   S +L    F N +    
Sbjct: 238 CLGGKTGYTAVAGATLVTYAKKDGMTLICVVMK-DTVGEQYPDSTNLFEYCFDNFSTYSV 296

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
            ++        N++  + + + ++    K+ +    +     D  S  + +
Sbjct: 297 ADFASISEEDTNITG-ILSENSDLIKIDKKGMIVIPKTASVLDVVSEVVPY 346


>gi|307825263|ref|ZP_07655483.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylobacter
           tundripaludum SV96]
 gi|307733719|gb|EFO04576.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylobacter
           tundripaludum SV96]
          Length = 395

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 93/263 (35%), Positives = 148/263 (56%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + + +L+ ++ F     +       ++D + G+V+ E      W PASLTKLMT Y+ F 
Sbjct: 6   LTLLILNAVWLFAVSEVSYGRHAAIIIDADNGNVLHEVEATQSWYPASLTKLMTLYMTFD 65

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            LK  +  L   +T S  AS+ P S    ++G  +T+++A+  +I +SAND +V +AE L
Sbjct: 66  ALKAGQIHLHDTLTASTRASQQPNSKLGLRRGEHLTVEDAILAIITRSANDASVVLAEHL 125

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             TE+ F  +M   + +LG+  THFMNA G+  +   TT RDMA+L+W+ + +FP+Y HY
Sbjct: 126 GDTEENFAVNMTEKADSLGMYNTHFMNATGLPNNWQVTTPRDMAVLAWKAQRNFPEYYHY 185

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           F       KG +    N    ++ GA+GMKTGFTC SGFN++ +A Q  + LI V++G +
Sbjct: 186 FSAHSFNYKGTELRGINKFTASYPGAEGMKTGFTCGSGFNLIGAAHQNGKHLIGVVMGGM 245

Query: 248 DRNTRNKVSASLLSMGFYNKTDR 270
               R ++    +   F N T+ 
Sbjct: 246 TSKERYQLMMQKMDASFANLTNV 268


>gi|148984605|ref|ZP_01817873.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP3-BS71]
 gi|147922996|gb|EDK74111.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae
           SP3-BS71]
          Length = 406

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 144/360 (40%), Gaps = 31/360 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL+T Y+V+
Sbjct: 1   MLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVY 60

Query: 67  SFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
             L+     L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+
Sbjct: 61  EALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIAL 120

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARD 169
           AE +  +EK FV  M       G+     +N  G+                  +  +A D
Sbjct: 121 AEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASG 225
           +AI++  +   +PQ +   +       G    +TN+ +        G DG+KTG T  +G
Sbjct: 181 VAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAG 240

Query: 226 FNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII---- 277
            + V + ++    +I V+L A     +   R   ++SL+       T RK +        
Sbjct: 241 ESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQD 300

Query: 278 --KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                             E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 301 SKAPVQDGKEDTVTAVAPEDIYLIEQIGNQSSQSVQFTPDSKAIPAPLEARTVVGHLTYE 360


>gi|239827577|ref|YP_002950201.1| serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. WCH70]
 gi|239807870|gb|ACS24935.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacillus sp. WCH70]
          Length = 381

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/330 (23%), Positives = 129/330 (39%), Gaps = 19/330 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           L I A+ ML +  P  + A          L++ N+G ++ E         AS+TK+MT  
Sbjct: 9   LFIAAVMMLFSCIPDRAKAMNGVSAQSAILMEQNSGRILFEKDAHTKRRIASITKIMTVI 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     K     +   +T+S  A     S+   K+G  + L + +   +++S ND AVAI
Sbjct: 69  LAIESGK-----MDDTVTVSARAVHTEGSSIYLKEGEKIKLRDLVYGTMLRSGNDAAVAI 123

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFP 182
           AE +  + + FV  MN  +  +G+  THF N HG+     HY+TA DMA+L      +  
Sbjct: 124 AEHVGGSVEGFVFLMNQKAAEIGMRNTHFANPHGLDDSENHYSTAYDMALLMQYAMKNKE 183

Query: 183 -------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                  +        G +               +    G KTG+T  +   +V +A +G
Sbjct: 184 FRKISGTEVYRAPASPGEDWDRVWRNKNKLLTSLYEYCTGGKTGYTKRAKRTLVTTASKG 243

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
              LI+V L A D         ++   GF +    K     +    + +   +    S +
Sbjct: 244 GMDLISVTLDAPDD---WNDHIAMYEYGFGHYMIAKVNRKRMVKKIRDSFYRKNIQASRD 300

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           +     E       +K          D++K
Sbjct: 301 LRYPVTEEEIKELHVKI--YLLRPKKDWKK 328


>gi|261417877|ref|YP_003251559.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y412MC61]
 gi|261374334|gb|ACX77077.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacillus
           sp. Y412MC61]
          Length = 382

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 127/322 (39%), Gaps = 23/322 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++ ++G V+           AS+TK+MTA +     K     +   +T+S  
Sbjct: 32  VSAKSAILIEQHSGRVLFAKDAYTKRRIASITKIMTAILAIESGK-----MDDTVTVSAR 86

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S+   ++G  + L + +  L+++S ND AVAIAE +  + + FV  MN  +  +
Sbjct: 87  AVRTEGSSIYLRQGEKIKLRDLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNQKAAEI 146

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-------KGK 198
           G+  T F N HG+    ++ +      L  +      ++      K             +
Sbjct: 147 GMRDTEFANPHGLDDAENHYSTAYDMALLMQYAMKNKEFRRISGTKVYRAPAPPGEDGAR 206

Query: 199 KYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + N N  + + +    G KTG+T  +   +V +A +G   LIAV L A D         
Sbjct: 207 VWRNKNKLLTSLYEYCTGGKTGYTKRAHRTLVTTASKGGIDLIAVTLDAPDD---WNDHI 263

Query: 258 SLLSMGFYNK-----TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           ++   GF +      +  + ++ I   FY +     V ++   V   ++  +     + +
Sbjct: 264 AMYEYGFSHYHIAKVSSERVVDKISDPFY-RGRLQAVRDLRYPVTDKEESGLQVKVYLLK 322

Query: 313 AKDKESHFIDFEKITLLKNKIT 334
            + KE         T +   + 
Sbjct: 323 PR-KEWKKYPERAPTEVGKAVL 343


>gi|254707442|ref|ZP_05169270.1| D-alanyl-D-alanine carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261314930|ref|ZP_05954127.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
 gi|261303956|gb|EEY07453.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella pinnipedialis
           M163/99/10]
          Length = 295

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 110/291 (37%), Positives = 169/291 (58%), Gaps = 6/291 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L I   A+  +       A          +D  TG V  +      W PASLTK+M
Sbjct: 2   MSKSLRIWFAAVAFSGIALSGAAANPS----IAVDVATGKVYEQQDAFQRWYPASLTKMM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TAYV F  L+  +  L +P+ ++ NAS+ PPS   +K GS MTLD AL +++VKSAND++
Sbjct: 58  TAYVTFRALQSGQMTLESPVRMTVNASKEPPSKMGYKPGSIMTLDTALNIMLVKSANDVS 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE++  TE  FVQ MN  ++ LG+  +HF N +G+    +YTTARD+A+L+ +++ +
Sbjct: 118 VAVAEAVGGTEAAFVQRMNAEARRLGMFGSHFANPNGLHDPNNYTTARDLAVLAVQLRRE 177

Query: 181 FPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           FPQY HYF  + ++    K    N N  +G + GADGMKTGF CASGFN+  SA +  ++
Sbjct: 178 FPQYAHYFATEAIDPGAGKKVEANYNILLGRYDGADGMKTGFVCASGFNLAGSATRNGRT 237

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
           ++A++LGA  + TR   +A +++  F  ++        ++     NL+  V
Sbjct: 238 VLAIVLGADRQETRAIQAAQMMTDAFRARSSGGPTLATLRPAQTANLNQAV 288


>gi|322411118|gb|EFY02026.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 412

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 76/366 (20%), Positives = 145/366 (39%), Gaps = 31/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++   ++ + +     P  S   +    +   ++ ++G ++ E   D     AS+TKL+
Sbjct: 2   IKRLFFVLLITLAFRATPINSDDFSVAAKHAIAVEVDSGKILYEKEADKAVPVASITKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +   K    + +TIS            ++        T+   LK LIV +AN
Sbjct: 62  TTYLVYKEIANGKLEWGSSVTISNYPYELTTNYSISNVPLDARKYTVKELLKALIVTNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------GH 163
             A+A+AE +  TE KFV  M+   K  G+S    +NA G+  H               +
Sbjct: 122 SPAIALAEKMGGTEPKFVDKMSQQLKEWGISDAKLVNATGLTNHFLGKNKYPKTEDEDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTG 219
             +ARD+AI++  + T+FP+ +           G+   + N+          G DG+  G
Sbjct: 182 LFSARDLAIIARHLLTEFPEVLKITSKPSANFAGQTIYSYNYMLKDMPYYRDGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           ++   G + VA++++    +I V+L A     D       +  LL     N    + +N 
Sbjct: 242 YSEKGGASFVATSVENRMRIITVVLNADQAQEDEFAVFSATNQLLQYLLTNFQKVQVLNK 301

Query: 276 -----IIKDFYQQNLSNEVPNISEE-VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                I       + +  VP ++E+ +   +         +   KD        +K  +L
Sbjct: 302 SKSGQIKAFPILDSPNKTVPLVAEKNLSLIKPANSKIKKSLHITKDSSIISAPIKKGQVL 361

Query: 330 KNKITK 335
                +
Sbjct: 362 AKATLQ 367


>gi|294501119|ref|YP_003564819.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium QM B1551]
 gi|294351056|gb|ADE71385.1| D-alanyl-D-alanine carboxypeptidase [Bacillus megaterium QM B1551]
          Length = 382

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/342 (20%), Positives = 134/342 (39%), Gaps = 18/342 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +  + +  + +  + +P  S A  +       L++  +G V+     D     AS+TK+M
Sbjct: 6   KSIIYLFIVLLCLSGWPSTSSAAGSVSAHSAILMEQKSGRVLYAKNADQVSRIASITKIM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +     K     +   +T+S +A     S+    +G  + L + +  L+++S ND A
Sbjct: 66  TAILAIESGK-----INKTVTVSHSAVGVEGSSVYLVEGEKIKLKDLVYGLMLRSGNDAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE++  +E  FV  MN  ++ +G++ T F N HG+  H ++ +      L  R   +
Sbjct: 121 VAIAEAVGGSEDGFVYLMNKKAEEIGMTNTTFQNPHGLDDHENHRSTAHDMALLMRYAMN 180

Query: 181 FPQYMHYFQIKGLEIKGKK------YPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAI 233
              +      K   +K  +      + N N      +    G KTG+T  +   +V +A 
Sbjct: 181 NKIFKEISGTKVYRMKHPEEKWDRVWKNKNKLLTTLYAYCTGGKTGYTKLAKRTLVTTAT 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +    LIAV + A D         S+    F                 + +   +   I 
Sbjct: 241 KDGMDLIAVTINAPDD---WNDHISMYENAFDKYDMTSLAAKGELADIKDSFYKDQLYIK 297

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             V     +    + ++K    +      +++   + N + K
Sbjct: 298 RNVVYPLTKKEQSSVEVKTTLIQ--PKKQWKETGEVPNVVGK 337


>gi|260549669|ref|ZP_05823886.1| penicillin-binding protein 6B [Acinetobacter sp. RUH2624]
 gi|260407186|gb|EEX00662.1| penicillin-binding protein 6B [Acinetobacter sp. RUH2624]
          Length = 439

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 15/343 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +     E         +   +     D  +     ++I +L
Sbjct: 301 STLKMFKVETKQPTIVTTSLYAEP-APIDLNTFDYATQRIQVL 342


>gi|309800179|ref|ZP_07694364.1| penicillin-binding protein 3 [Streptococcus infantis SK1302]
 gi|308116187|gb|EFO53678.1| penicillin-binding protein 3 [Streptococcus infantis SK1302]
          Length = 397

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/352 (19%), Positives = 141/352 (40%), Gaps = 31/352 (8%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           +     +        +   ++ N+G ++ E     P   AS++KL+T Y+V+  L++ K 
Sbjct: 16  SATTVSAQDFDVAAKHAIAVEANSGKILYEKDATQPVEIASISKLLTVYLVYEALEQGKI 75

Query: 75  MLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+AE +  +E
Sbjct: 76  SLSTPVEISDYPYQLTTNSAASNVPMEARNYTVEELLEATLVSSANSAAIALAEKIAGSE 135

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRI 177
           K FV  M    +  G+     +N  G+                  +  +A D+A+++  +
Sbjct: 136 KDFVDMMKAKLQEWGIQDATLVNTTGLNNETLGTNIYPGSKKDDENKLSAYDVAVVARNL 195

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAI 233
              +PQ +   +       G    +TN+ +        G DG+KTG T  +G + V + +
Sbjct: 196 ILKYPQVLEITKKPSSTFAGMTIHSTNYMLEGMPAYRGGVDGLKTGTTDKAGASFVGTTV 255

Query: 234 QGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKKINYI------IKDFYQQ 283
           +    +I V+L A +++T    R   ++S+L     N + +  +                
Sbjct: 256 EKGMRIITVVLNADNQDTNPYARFTATSSILDYISSNFSLQTIVKQGESYEDSKSPVLDG 315

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                     E++   Q+      + +    D   H    E  T++ +   +
Sbjct: 316 KEDTVTAVAKEDIKIVQRLGSRTQSTITYTADTTEHTAPLEAGTVVGHLTYE 367


>gi|163791201|ref|ZP_02185618.1| hypothetical protein CAT7_03879 [Carnobacterium sp. AT7]
 gi|159873532|gb|EDP67619.1| hypothetical protein CAT7_03879 [Carnobacterium sp. AT7]
          Length = 440

 Score =  155 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 72/391 (18%), Positives = 135/391 (34%), Gaps = 59/391 (15%)

Query: 1   MRQF----LVIIAMAML----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENY 46
           M++F     V + M +L          + +          +     +++  TG V+    
Sbjct: 1   MKKFKKISTVFVTMLLLGTFSPLISMDTTVSAATIEQPKVEAAAAFIIEPTTGKVLLNQN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STM 102
            D     AS+TK++T Y++   +K         I IS+ A E   +            T 
Sbjct: 61  GDEKLGIASMTKMITEYILLETIKNGDLAWDDQIEISEYAHEISQNYELSNVPLRIDDTY 120

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +++   + + + SAN   +A+AE +   EK FV  M+   ++ G++     N  G+    
Sbjct: 121 SVEELYQAMAIYSANGATIALAEHIAGDEKAFVDMMHEKVESWGITNYEIYNTTGLSNFD 180

Query: 163 --------------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNT 203
                         +  TAR MAI++  + TDFP  +    I     +          N 
Sbjct: 181 LNGNIYPGSTENSENSMTARGMAIIAQHLITDFPDVLKTSSISKKTFREGTSDAIEMTNF 240

Query: 204 NWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKV 255
           NW            DG+KTG T  +G ++  +A Q    +I +++ A +       R   
Sbjct: 241 NWMLPGLDHERENVDGLKTGTTDFAGASMTGTAEQEGMRIITIVMNATNGQKDLGKRFVE 300

Query: 256 SASLLSMGFYNKTDRKKINYIIK-------DFYQQNLSNEVPNISEEVCTTQK---EIIN 305
           +  ++   F N +  +                 +         I  +V        +  N
Sbjct: 301 TDKMMDWAFENWSKVQVFKEGQTLDNVDPAKVDKGKKDTVKLAIQSDVSLLVPTNTDSAN 360

Query: 306 YNTQMKEAKDKESH----FIDFEKITLLKNK 332
             T ++  KD  +         +K T +   
Sbjct: 361 TETTVQLQKDLLNESGHLTAPIKKGTEVGTV 391


>gi|262375440|ref|ZP_06068673.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter lwoffii SH145]
 gi|262309694|gb|EEY90824.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter lwoffii SH145]
          Length = 437

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 14/314 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+  + +IA+  L       +       E+ +   +T+LD+ +G VIAE+  D    PAS
Sbjct: 1   MKYIISLIAVFSLFISAFSHAALLNIVPESVEAEAWTILDSQSGQVIAEHNADVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    ++  K      +T +       +  S    K+G  +++D  L  LI+
Sbjct: 61  LTKMMVAYIALKEIEAGKLDKNEVLTATSVVKTVMWDESQMYLKEGDLISVDQLLAGLII 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +     +FV+ MN  +K LG+  T+F N  G+    HY+TA D+A L
Sbjct: 121 MSANDAAVTLAEKISGGIPQFVERMNQEAKALGMQHTNFQNPAGITMPEHYSTAADLARL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +  + P Y++Y +          +  TN  +      DG+KTGFT A+G+N+  +A 
Sbjct: 181 SMAVVNETPDYLYYSKQPSFTYNQHFHRATNRVLQVDPTVDGLKTGFTRAAGYNLALTAN 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +        ++ LI V+LG      R +VS  L+++ +    +   I           + 
Sbjct: 241 RVTADFEMPNRRLIVVVLGTNSAAKRAEVSHKLMNLAYAYTRNEVAIKDQQLLAELPVIK 300

Query: 287 NEVPNISEEVCTTQ 300
           + +     +    Q
Sbjct: 301 STLKMFKVQTKQPQ 314


>gi|291537069|emb|CBL10181.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis M50/1]
          Length = 468

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 72/350 (20%), Positives = 124/350 (35%), Gaps = 29/350 (8%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           +M +      +         P   +++ +TG V+ +        PAS+TK+MT  +    
Sbjct: 27  SMCIPVYAAEYWPEGPEVVSPNVIVMEASTGTVLYDCDSLEAHYPASITKIMTTLIALEN 86

Query: 69  LKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                  L   +T S         S      G  MT++  L  +++ SAN+ A A+AE +
Sbjct: 87  SD-----LNDIVTFSDAAIDNTEGSGIARDYGEQMTMEQCLYAVMLASANECAYAVAEHV 141

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY--- 184
             T + FV  MN  +K LG   THF N HG+    HYT   DMA+++     +       
Sbjct: 142 GGTIENFVAMMNEKAKELGCQNTHFANPHGLHDENHYTCCYDMALIARAAYQNETFRIIV 201

Query: 185 ---MHYFQIKGLEIKGKKYPNTNWAVGT-------FLGADGMKTGFTCASGFNIVASAIQ 234
               +         +     N N  +         + G  G KTG+T A+   +V  A +
Sbjct: 202 GTARYTIPPTNKHAEQTDLQNHNEMLYPFQTNKYVYDGCTGGKTGYTNAANSTLVTYAER 261

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
              +LI V++     N     S +L    F N                +  +    N +E
Sbjct: 262 DGMTLICVVMNTQSPNQ-WLDSRNLFDYCFDNFQLFNIAENETNYTSVEQKNAGTLNTNE 320

Query: 295 E---------VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                     +   +    +  T      D  +  +   + T   +++ K
Sbjct: 321 PFVDIDKDAGIVLPKTAEFSDATSKIVYDDVTNDTVGTIEYTYAGHEVGK 370


>gi|331003847|ref|ZP_08327339.1| hypothetical protein HMPREF0491_02201 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412039|gb|EGG91436.1| hypothetical protein HMPREF0491_02201 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 455

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/341 (20%), Positives = 131/341 (38%), Gaps = 29/341 (8%)

Query: 1   MRQFL-----VIIAMAMLSNIF-----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           +++ +     +++++ M+S           +I    K     + + NTG  + E   D  
Sbjct: 3   IKKLVAGGLSILLSIGMISFSSEYAMVTHAAIPPDIKSQGAAVYNANTGEFLYEKNGDRQ 62

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNA 107
           + PAS+TK+MT  +V          L   +  S+      E   +     +G  M++ +A
Sbjct: 63  FYPASITKIMTTLIVLEQA-----NLNDTVVFSRAATTNLEAGATRLGVSEGDKMSVRDA 117

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L   ++ SAN+++  +AE +  +   F   MN  ++ +G + T+F+N  G+    H TTA
Sbjct: 118 LYGTMLASANEVSNGLAEYVGGSIAGFSSMMNARAREIGATNTNFVNPSGLNNQNHVTTA 177

Query: 168 RDMAILSWRIKTDFP---------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
           +DMA ++     +                 + K      K +         + G  G KT
Sbjct: 178 KDMARIAAEAFRNPDFRVIAGTKVYNFPAIKTKAEVTPIKMHHRMVNGSDNYPGVIGGKT 237

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+T ++G  +V  A +    LI V+L +    T    + +LL  GF   T          
Sbjct: 238 GYTRSAGNTLVTCAERNGVRLIVVVLKSPS--THYADTRALLDYGFEVATTGGVNISSKD 295

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
              +  +          V +T +  +      K     +S 
Sbjct: 296 TGAKNAVVKAKQETKAVVESTSQAQVAIADSAKVDAAPKSI 336


>gi|30019617|ref|NP_831248.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29895161|gb|AAP08449.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 386

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 87/336 (25%), Positives = 135/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + M+ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 13  MRRICVIITLLMMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 72

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 73  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 127

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 128 NDAAQVIAESVGGSIDGFVYLMNQKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 187

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 188 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 246

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +G   LI V L A           +L   GF      K +         +         
Sbjct: 247 SKGGLDLIVVTLSASSD---WDDHMNLFDKGFDRFKQTKVLGQGAIAEINEKKYANHVYT 303

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 304 KNSFSVPLTEEEKKNVVLKVELDKSTKLTDGVKVGK 339


>gi|118589859|ref|ZP_01547263.1| penicillin binding protein [Stappia aggregata IAM 12614]
 gi|118437356|gb|EAV43993.1| penicillin binding protein [Stappia aggregata IAM 12614]
          Length = 384

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 74/345 (21%), Positives = 135/345 (39%), Gaps = 13/345 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR+  +   + + S   P  +      K P   L +  +G ++    PD P++P +L K+
Sbjct: 1   MRRGALFSFLVVASIAGPAQAAETIVTKAPMAFLYEPASGTILFAKEPDRPFSPGALVKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIV 113
           MTA  VF  LK+    L     +S++A           +       S + +++ LK L+V
Sbjct: 61  MTAATVFKSLKDGDLKLDQTCKVSEHAWRTGGAPSGRGATMFAAIKSDIPVEDLLKGLLV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            + ND A+ +AE L  +E+ F   M   +  +G+  + F N+ G  +    TT RD A L
Sbjct: 121 HNGNDAAIVLAECLDGSEEAFAVRMTEFAHAIGMKNSRFGNSTGYPEVPSQTTVRDQARL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I          F I           N N  +G     DG+  G    +G++ + S  
Sbjct: 181 AEYILESHADLYPMFAIPEFTWNKIFQRNKNPLLGEIRNLDGLGGGNDAEAGYSGLGSVD 240

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVP 290
           +  + +IA + G      R +    ++   +   T +   +             +S  VP
Sbjct: 241 RNGRRVIAAVAGLSSDKHRLQTLKEVIEGAWEYFTVQTLFSAGDVVADGRVFGGISASVP 300

Query: 291 NISEE---VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +SEE   V       ++Y  ++       +     EK+  ++  
Sbjct: 301 LVSEEGVNVLLPLGGTLDYRIRVIYNGPLAAPVQAGEKVGEIRVI 345


>gi|331091250|ref|ZP_08340091.1| hypothetical protein HMPREF9477_00734 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404697|gb|EGG84236.1| hypothetical protein HMPREF9477_00734 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 400

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 136/361 (37%), Gaps = 33/361 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  +V+I     S     +   +        L+D ++G ++ E   D     AS TK+MT
Sbjct: 8   RIGIVLIVTIFFSITAKAVEKPKELYAQSAVLMDADSGRILFEKNGDQRRAMASTTKIMT 67

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +        +  L   +  S+NA++ P  +   +KG T  L + L  L+++S ND AV
Sbjct: 68  CILALE-----RGGLEGEVVASENAAKQPKVHLGVEKGETFRLRDLLYSLMLESHNDSAV 122

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRI 177
            IAE +  + +KF + MN  +K +G   T+F+  +G+        H TTA ++A +    
Sbjct: 123 MIAEKVGGSVEKFAKMMNEKAKEIGCINTYFITPNGLDAKDDTGKHSTTAGELAKIMSYC 182

Query: 178 KTDFPQYMHYFQIK---------GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            T  P+   +  I            + +     N N  +    GA   KTGFT  +G+  
Sbjct: 183 ITQSPKKEEFLAITGQKSYQFTNMEKTRTYICHNHNAFLEMMEGAISGKTGFTGEAGYCY 242

Query: 229 VASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKK-----INYIIKDF 280
           V +  + D++ +  +LG    N    +   +  L+  G  +   +          I  + 
Sbjct: 243 VGALRRNDRTFVVALLGCGWPNNKTYKWSDTKKLMQYGLDSFQYKDIEPAIYFETIPVEN 302

Query: 281 YQQNLSNEVPNISEEVCTTQKEIIN-------YNTQMKEAKDKESHFIDFEKITLLKNKI 333
                 +         C   K+ I+         +   E K K+      EK        
Sbjct: 303 GIPQDEDFTEKAQLRFCVKGKKKISERILMSDEESVRVETKIKKEWKAPIEKGERAGTVT 362

Query: 334 T 334
            
Sbjct: 363 Y 363


>gi|310642604|ref|YP_003947362.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Paenibacillus
           polymyxa SC2]
 gi|309247555|gb|ADO57122.1| Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           polymyxa SC2]
          Length = 420

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 80/277 (28%), Positives = 117/277 (42%), Gaps = 13/277 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            + +        A        +L+D  +G +I     D     ASLTK+MTA V     +
Sbjct: 44  VLGAVTTEATPPALGTHAQAASLIDVTSGRIIYSAEGDRELRIASLTKIMTAIVAIEHGR 103

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   + +S  A     S+   + G  MTL+N L  L+++S ND A AIAE +  T
Sbjct: 104 -----LQDRVKVSSTAYAKEGSSLFLQMGEQMTLENMLYGLMLRSGNDAASAIAEHVGGT 158

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E+ FV  MN+ +  LGL+ THF N HG+   GHY++A DMA L+     +          
Sbjct: 159 EEGFVHLMNDKAVQLGLNHTHFANPHGLDADGHYSSANDMARLTAYALHNPTFARIVKTE 218

Query: 191 KGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                         + N N  +  + GADG+KTGFT  +   +V+SA +  + L AV L 
Sbjct: 219 LKKAPNPNDSWDYSWHNKNKMLRLYEGADGVKTGFTKKAFRCLVSSATREGRQLAAVTLN 278

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             D        A +L  GF         +        
Sbjct: 279 DGDD---WNDHARMLDYGFRYYPLIPITDKQQPIDGY 312


>gi|324325585|gb|ADY20845.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 374

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 134/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 1   MRRICVIITLLIMYASVIPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EKVLVSNEAVRVEGSAIYLKAGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF        +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTNVVGQGALAEITEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   D  K+  
Sbjct: 292 KNSFAVPLTEQERKNVVLKVELDKSAKLKDGVKVGK 327


>gi|229102172|ref|ZP_04232882.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228681242|gb|EEL35409.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 378

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 136/336 (40%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 5   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQSSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKKYKSNSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGALAEINEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK +   +  K+  
Sbjct: 296 KNSFSVPLTEEEKKNVVLKVELDKSAKLTEGVKVGK 331


>gi|325265499|ref|ZP_08132221.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
 gi|324029278|gb|EGB90571.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
          Length = 424

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 78/370 (21%), Positives = 137/370 (37%), Gaps = 42/370 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI----------AETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +Q    I +  +       S            +        L+D ++G ++         
Sbjct: 17  KQITAFILICCMVFAGAGGSAVMEVRAESEEPDNLYAQSAVLMDADSGRILFSKNGQQEK 76

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS TK+MT  +   + +     L + +T+S  A+  P  +    KG T  L + L  L
Sbjct: 77  AMASTTKIMTCILALEYGR-----LDSEMTVSSYAASQPKVHLGAYKGETFYLRDLLYSL 131

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTA 167
           +++S ND AV IAE++  + + F   MN  +K LG + T+F+  +G+        H+TTA
Sbjct: 132 MLESHNDAAVIIAENIGNSVEGFADMMNAKAKELGCNHTYFITPNGLDAADENGSHHTTA 191

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK---------YPNTNWAVGTFLGADGMKT 218
            D+A +      D PQ   + +I                    N N  +    GA   KT
Sbjct: 192 EDLARIMKYCIMDSPQKEMFLEITRTPSYQFTDCSGKSTYSCTNHNAFLQMMDGALSGKT 251

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKK--- 272
           GFT  +G+  V S  + D++ I  +L     N    +   + +L++ G  N   R     
Sbjct: 252 GFTGDAGYCYVGSLRRDDRTFIVALLACGWPNNKSYKWADTKALMNYGLENYEYRDIWQD 311

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQ-------KEIINYNTQMKEAKDK-ESHFIDFE 324
           I+                    +V           K ++  + Q++   DK E+      
Sbjct: 312 IDAGTAAVKNGIDKAHPFWTETDVPLEVMGADRDWKLLLKTDEQVEMNWDKEETLEAPVV 371

Query: 325 KITLLKNKIT 334
           K   +   + 
Sbjct: 372 KGQKVGEVVY 381


>gi|86357779|ref|YP_469671.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
 gi|86281881|gb|ABC90944.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CFN 42]
          Length = 360

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 11/309 (3%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +++ +TG V+     D  ++PASL KLMT  +VF  + + +  L T   +S+ A     +
Sbjct: 1   MIEASTGTVLLAKNEDQSFSPASLAKLMTMDLVFDAVTKGQITLDTEYPVSEYAWRTGGA 60

Query: 93  -----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                       S + +++ +K + ++ AND  + IAE +  +E++F Q M   ++ LG+
Sbjct: 61  PSRTATMFAALKSRVRVEDLIKGVAIQGANDSCIIIAEGMAGSEQQFAQSMTRRARELGM 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
               F N+ G+       TAR+M  L+  ++  +P    YF  +  E       N N  +
Sbjct: 121 EKAVFGNSTGLPDGKSKVTAREMVTLAAALQQSYPNLYPYFAQQDFEWNKIFQRNRNPLL 180

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
           G  LGADG+ TGF    G++IVAS  +  + L   + G      R + +  +L  G    
Sbjct: 181 GLDLGADGLATGFAEGEGYSIVASVQRDGRRLFLALAGIASDKERTEEAKRVLEWGLTAF 240

Query: 268 TDRKKINY----IIKDFYQQNLSNE--VPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
             R+             Y  +      V      V          + ++       +   
Sbjct: 241 ESRQIFTEHEVIGAASVYGGSARTVDLVAKAPVSVYIPISNPDRLSARIVYHWPLTAPVK 300

Query: 322 DFEKITLLK 330
              +   L+
Sbjct: 301 PDYQAGTLR 309


>gi|260556621|ref|ZP_05828839.1| penicillin-binding protein 6B [Acinetobacter baumannii ATCC 19606]
 gi|260409880|gb|EEX03180.1| penicillin-binding protein 6B [Acinetobacter baumannii ATCC 19606]
          Length = 439

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 15/343 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FV+ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVKRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +     E         +   +     D  +     ++I +L
Sbjct: 301 STLKMFKVETKQPTIVTTSLYAEP-TPIDLNTFDYATQRIQVL 342


>gi|160880714|ref|YP_001559682.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
 gi|160429380|gb|ABX42943.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
          Length = 429

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 126/326 (38%), Gaps = 29/326 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D + G V+           AS TK+MT  VV          L   +T++ 
Sbjct: 72  QLNALSACLMDASNGRVLYGKDAYKEMPMASTTKIMTLLVVLEKA-----NLDDVVTVTS 126

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA++ P      + G    L + L  L+++S ND AVAIAE +  + + F   M   +K 
Sbjct: 127 NAAKQPDVQLNIQTGEQYILRDLLYSLMLESHNDTAVAIAEHVGGSVEGFCNMMTEKAKE 186

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------K 198
           LG + T F   +G+   GHYTTARD+++++     + P++         +          
Sbjct: 187 LGANHTSFKTPNGLDADGHYTTARDLSLIASYAIKN-PEFCKIVGTATYQFNEVNHKRSF 245

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +    GA G+KTGFT  +G+  V +     ++L++ +LG+     +  +   
Sbjct: 246 NVNNRDRFLYMMKGAIGIKTGFTGKAGYCFVGAVNIDGKTLVSTVLGSGWPPHKTYKWAD 305

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ--------------K 301
           +  L+  G  N         +        +   +   + ++ + +              +
Sbjct: 306 TTKLMEYGLNNFNVYSLYEKLTPGSECVKVPEVISVHNGKINSVKLISTDELLSEKLLLR 365

Query: 302 EIINYNTQMKEAKDKESHFIDFEKIT 327
           E    + ++       +      K+ 
Sbjct: 366 EGEEVSIKINLLDHITAPTKAGVKVG 391


>gi|169795133|ref|YP_001712926.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter baumannii AYE]
 gi|213158204|ref|YP_002320255.1| D-ala-D-ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter baumannii AB0057]
 gi|215482680|ref|YP_002324876.1| Penicillin-binding protein 6B precursor [Acinetobacter baumannii
           AB307-0294]
 gi|301345223|ref|ZP_07225964.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii AB056]
 gi|301511561|ref|ZP_07236798.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii AB058]
 gi|301596993|ref|ZP_07242001.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii AB059]
 gi|332853987|ref|ZP_08435103.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013150]
 gi|332869733|ref|ZP_08438921.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013113]
 gi|169148060|emb|CAM85923.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter baumannii AYE]
 gi|193077983|gb|ABO12897.2| putative D-ala-D-ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter baumannii ATCC 17978]
 gi|213057364|gb|ACJ42266.1| D-ala-D-ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter baumannii AB0057]
 gi|213986927|gb|ACJ57226.1| Penicillin-binding protein 6B precursor [Acinetobacter baumannii
           AB307-0294]
 gi|332728269|gb|EGJ59651.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013150]
 gi|332732635|gb|EGJ63868.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013113]
          Length = 439

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 15/343 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +     E         +   +     D  +     ++I +L
Sbjct: 301 STLKMFKVETKQPTIVTTSLYAEP-TPIDLNTFDYATQRIQVL 342


>gi|328543897|ref|YP_004304006.1| D-alanyl-D-alanine carboxypeptidase family [polymorphum gilvum
           SL003B-26A1]
 gi|326413641|gb|ADZ70704.1| D-alanyl-D-alanine carboxypeptidase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 393

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 75/328 (22%), Positives = 127/328 (38%), Gaps = 11/328 (3%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
            F   +     +     L+D ++  V+    PD  + P SL K+MTA VVF  LK  +  
Sbjct: 27  AFAAAADVLETRARSAFLIDHSSRTVLYAKAPDEAFAPGSLAKVMTAAVVFDALKSGEVF 86

Query: 76  LTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             T   +S++A          S       S + + + L+ L+V +AND A+ +AE L  +
Sbjct: 87  EETLFKVSEHAWRTGGAPSRTSTMFAAVRSEIPVADLLRGLLVHNANDAAIVLAEGLAGS 146

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           E  F Q M   +  +G+ ++ F N  G    G+ TTARDMA L+  I          F +
Sbjct: 147 ETAFAQRMTALATRIGMISSRFANPTGFEDPGNRTTARDMARLAAYILDTHRTRYELFSL 206

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                      N N  +G   G DG+  G + A G++ +AS  +  + +IAVI G     
Sbjct: 207 PEFTWNRIFQRNKNPLLGEIRGLDGLGAGLSQADGYSGLASVERDGRRVIAVIAGLDTDK 266

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEE---VCTTQKEII 304
            R      L+   +     +                  +  VP ++++   V        
Sbjct: 267 MRLAALRDLVEGAWEAFQVQILFGRGEPVASARVYGGETGSVPLVAKDPIAVLLPVGGNR 326

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +Y  +   +    +  +       L+  
Sbjct: 327 DYRLRAVYSGPFVAPVVAGAPAGELRVL 354


>gi|228938680|ref|ZP_04101285.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971562|ref|ZP_04132186.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978173|ref|ZP_04138551.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228781645|gb|EEM29845.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228788221|gb|EEM36176.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821056|gb|EEM67076.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 378

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 5   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAESVGGSIDGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGNES-FKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGAIAEINEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK     D  K+  
Sbjct: 296 KNSFSVPLTEEERKNVLLKVELDKSITLEDGVKVGK 331


>gi|260682216|ref|YP_003213501.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CD196]
 gi|260685815|ref|YP_003216948.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
 gi|260208379|emb|CBA60888.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CD196]
 gi|260211831|emb|CBE02232.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
          Length = 414

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 21/347 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++ +    ++ +F F       N      L+D  T  ++ E   D     ASL+K+MT  
Sbjct: 15  ILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSKMMTFL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND A+AI
Sbjct: 75  LAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGNDAAIAI 134

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMAIL 173
           A+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA D+  L
Sbjct: 135 AKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENMSTAHDIVTL 194

Query: 174 ---SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +    +    +   Q+     K   + NTN  + +  G DG+KTG+T  +G+ +  
Sbjct: 195 GKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAGYCLAF 254

Query: 231 SAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S +         +  LI V+LG  ++  R   SA+LL  G  N   +K  +         
Sbjct: 255 SMMVPKDAKNERNHRLIGVVLGDGNKKNRISSSATLLKYGKDNFHSKKIAHKGDIIETPC 314

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   I+ +V      +++ N  +      ++      K  ++ 
Sbjct: 315 VDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 361


>gi|326939188|gb|AEA15084.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 374

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAESVGGSIDGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGNES-FKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGAIAEINEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK     D  K+  
Sbjct: 292 KNSFSVPLTEEERKNVLLKVELDKSITLEDGVKVGK 327


>gi|312135071|ref|YP_004002409.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1
           [Caldicellulosiruptor owensensis OL]
 gi|311775122|gb|ADQ04609.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor owensensis OL]
          Length = 451

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 142/349 (40%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F ++      +      S           L++ +TG ++ E  P+    PAS TK++TA 
Sbjct: 19  FAILFTYPFYTYSQQEASDKLGLSAKSAILVEAHTGQILFEKNPNLRCFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L     +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----DLNKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++  +  +FV+ MN  +K++G   ++F+N HG+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENIAGSIPEFVKKMNEYAKSIGAKNSYFVNPHGLHSPEHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         + + +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 ILRKIFSTVEYRITTASMHEKPEWQIIYNINKLLRKNSKYYYPYATGIKTGYTTQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + D  LIA+IL + D       +  L + GF N    K  +              
Sbjct: 255 IASAKKDDIELIAIILFSEDA---FSDAIKLFNYGFNNFKREKLFSENQIVGKVLIDKTN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMK-----EAKDKESHFIDFEKITLLKNK 332
              +   +      + N  +  +          +   I   K T++ N 
Sbjct: 312 HKWLDGYIKIPVYVLQNVYSPAESNFTYTVDFSKDLKIPIYKDTVIGNV 360


>gi|296449308|ref|ZP_06891091.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP08]
 gi|296880760|ref|ZP_06904710.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP07]
 gi|296261835|gb|EFH08647.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP08]
 gi|296428255|gb|EFH14152.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP07]
          Length = 414

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 147/352 (41%), Gaps = 22/352 (6%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++Q  ++ +    ++  F F       N      L+D  T  ++ E   D     ASL+K
Sbjct: 10  IKQLTILTLIFIFITPGFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSK 69

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND
Sbjct: 70  MMTFLLAIEAIDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGND 129

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTAR 168
            A+AIA+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA 
Sbjct: 130 AALAIAKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENISTAH 189

Query: 169 DMAIL---SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+  L    +    +    +   Q+     K   + NTN  + +  G DG+KTG+T  +G
Sbjct: 190 DIVTLGKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAG 249

Query: 226 FNIVASAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           + +  S +         +  LI V+LG  ++  R   SASLL  G  N   +K  +    
Sbjct: 250 YCLAFSMMIPKDAKNERNHRLIGVVLGDGNKKNRISSSASLLKYGKDNFHSKKIAHKGDI 309

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    +   I  +V      +++ N  +      ++      K  ++ 
Sbjct: 310 IETPCVDGIDDFKIKVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 361


>gi|126698096|ref|YP_001086993.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile 630]
          Length = 414

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 21/347 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++ +    ++ +F F       N      L+D  T  ++ E   D     ASL+K+MT  
Sbjct: 15  ILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSKMMTFL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND A+AI
Sbjct: 75  LAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGNDAAIAI 134

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMAIL 173
           A+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA D+  L
Sbjct: 135 AKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENMSTAHDIVTL 194

Query: 174 ---SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +    +    +   Q+     K   + NTN  + +  G DG+KTG+T  +G+ +  
Sbjct: 195 GKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAGYCLAF 254

Query: 231 SAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S +         +  LI V+LG  ++  R   SA+LL  G  N   +K  +         
Sbjct: 255 SMMVPKDAKNERNHRLIGVVLGDGNKKNRISSSATLLKYGKDNFHSKKIAHKGDIIETPC 314

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   I+ +V      +++ N  +      ++      K  ++ 
Sbjct: 315 VDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 361


>gi|322411635|gb|EFY02543.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
           27957]
          Length = 409

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 147/379 (38%), Gaps = 43/379 (11%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++    L  + +A        L+        +  +++ ++G V+ E     P   ASLT
Sbjct: 1   MKKRWAILFFVVLACSGLGKTVLAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVK 114
           KL+T Y+V   +K  +  L+  + +S  A         ++        ++ + LK  +V 
Sbjct: 61  KLVTVYLVLDKVKSGQLQLSDQVNLSDYAFELTTDSSLSNVPFDQKAYSVQDLLKATLVA 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-------------- 160
           S+N  A+A+AE +  +E  FV  M       G+++   +NA G+                
Sbjct: 121 SSNSAAIALAEKVAGSEPNFVAQMRIQLSRWGITSGKILNASGLPNEVLKDHRYPGSALE 180

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGM 216
             +  +ARD+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+
Sbjct: 181 EENILSARDIAIVTMHLLEDFPEILEITKQTEVDFAGNSIHSFNQLLLGMAKGRAGVDGL 240

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKK 272
           KTG T  +G  +V ++I+    LI VIL A       NTR + +  LL         RK 
Sbjct: 241 KTGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANRLLDYVAKRYHRRKI 300

Query: 273 INYI----IKDFYQQNLSNEV--PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
           +        + F   N + +     ++++V              +     +S      K 
Sbjct: 301 LKKGSLMTERPFSVVNGTAQTLSAYVTKDVTLVLGTDELAPRPKQFVVSTDSLLAPIAKG 360

Query: 327 TLL---------KNKITKK 336
            ++           +  KK
Sbjct: 361 EVVAYLASPRIAGERYLKK 379


>gi|291484748|dbj|BAI85823.1| penicillin-binding protein 5* [Bacillus subtilis subsp. natto
           BEST195]
          Length = 382

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 120/326 (36%), Gaps = 16/326 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F   + + M+S +   ++      A         ++D  +G V+           AS
Sbjct: 1   MRIFKKAVFVIMISFLIATVNVNTAHAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     +   +T+S NA     S     +G  + L + +  L+++S
Sbjct: 61  ITKIMTAVLAIESGK-----MDQTVTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVAIAE +  +   FV  MN  ++ LG+  T F N HG+  H ++ +      +  
Sbjct: 116 GNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILT 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
           +       Y      K  + +  +    N        +  + G KTG+T  +   +V++A
Sbjct: 176 KYAMKLKDYQKISGTKIYKAETMESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LIAV +   +          + +  F +               +         I
Sbjct: 236 SKDGIDLIAVTINDPND---WDDHMKMFNYVFEHYQTYLIAKKGDIPKLKGTFYESKAFI 292

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKES 318
             ++     E    + ++     K  
Sbjct: 293 KRDITYLLTEEEKEDVKINTTLLKPK 318


>gi|83311331|ref|YP_421595.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum magneticum
           AMB-1]
 gi|82946172|dbj|BAE51036.1| D-alanyl-D-alanine carboxypeptidase [Magnetospirillum magneticum
           AMB-1]
          Length = 417

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 90/238 (37%), Positives = 136/238 (57%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
             +D  +G VIAE+    P +PASLTK+MTAYV F+ +K  K      IT+S+ A+    
Sbjct: 34  LAVDLGSGAVIAESRGGAPHHPASLTKMMTAYVAFAAIKAGKVSQDDVITVSERAASQGG 93

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           ++   + G  +TL  ALK +IV+SAND AVA+AE +  +E  F   M   +  LG++++ 
Sbjct: 94  ASLDLRPGERITLGAALKAMIVRSANDAAVAVAEHVGGSESAFASRMTEEAARLGMTSSS 153

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           F NA G+   GH ++ RDMA+L+  I+ DFP +   F  +    KG+  P  N  +G + 
Sbjct: 154 FRNASGMTAGGHVSSPRDMAVLAMAIERDFPTFRPLFSSRDTTWKGRVLPTVNGFLGAYA 213

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           GA+GMKTGFTC++G+N+VA A +G +  +AV++GA     R      L+         
Sbjct: 214 GAEGMKTGFTCSAGYNLVAIAHRGGRRALAVVMGAESSAQRLGAIRRLMDQALQATPT 271


>gi|75675891|ref|YP_318312.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           winogradskyi Nb-255]
 gi|74420761|gb|ABA04960.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrobacter
           winogradskyi Nb-255]
          Length = 587

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 82/249 (32%), Positives = 134/249 (53%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N+G  ++   PD   +PASLTK+MT Y++F  L   +  L + + +S  A+  
Sbjct: 57  ASIVVDANSGATLSSTSPDSLRHPASLTKMMTLYMLFERLDAGRIGLDSEMRVSARAAAQ 116

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            P+    + G T+ +++A+K L+ KSAND AV IAE++   E  F + M   ++ LG++ 
Sbjct: 117 NPTKLGLRPGQTIRVEDAIKGLVTKSANDAAVVIAEAIAGDEDDFARMMTRKARALGMTR 176

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T + NA G+      TTARD A L   ++  FP+Y  YF       +G+     N  VG+
Sbjct: 177 TVYRNASGLPDDDQVTTARDQATLGRALQDRFPRYYRYFATTSFTFRGRTIRGHNRLVGS 236

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
             G DG+KTG+  ASGFN+V +  +G++ L+ V+LG     +R+     LL+        
Sbjct: 237 VDGVDGIKTGYIRASGFNLVTNLKRGNRHLVGVVLGGRSGGSRDATMRKLLAENLDKAAT 296

Query: 270 RKKINYIIK 278
           R+ +  I +
Sbjct: 297 RRTVAAIAE 305


>gi|142820|gb|AAA22377.1| penicillin-binding protein 5 [Bacillus subtilis]
          Length = 382

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 77/336 (22%), Positives = 133/336 (39%), Gaps = 18/336 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F   + + M+S +   ++      A         ++D  +G V+           AS
Sbjct: 1   MRIFKKAVFVIMISFLIATVNVNTAHAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     +   +T+S NA     S     +G  + L + +  L+++S
Sbjct: 61  ITKIMTAVLAIESGK-----MDQTVTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILS 174
            ND AVAIAE +  +   FV  MN  ++ LG+  T F N HG+  H  HY+TA DMAIL+
Sbjct: 116 GNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILT 175

Query: 175 WRIK--TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
                     +   +  I+   ++             +  + G KTG+T  +   +V++A
Sbjct: 176 KYAIEAERLSKDFRHKNIQAETMESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LIAV +   +          + +  F +               +         I
Sbjct: 236 SKDGIDLIAVTINDPND---WDDHMKMFNYVFEHYQTYLIAKKGDIPKLKGTFYESKAFI 292

Query: 293 SEEVC--TTQKEIINYNTQMKEAKDKESHFIDFEKI 326
             ++    T++E  N        K K++   D  KI
Sbjct: 293 KRDITYLLTEEEKENVKINTTLLKPKKAWEKDASKI 328


>gi|163760085|ref|ZP_02167168.1| putative penicillin-binding protein/D-alanyl-D-alanine
           carboxypeptidase [Hoeflea phototrophica DFL-43]
 gi|162282484|gb|EDQ32772.1| putative penicillin-binding protein/D-alanyl-D-alanine
           carboxypeptidase [Hoeflea phototrophica DFL-43]
          Length = 289

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 87/265 (32%), Positives = 140/265 (52%), Gaps = 6/265 (2%)

Query: 3   QFLVIIAMAMLSNIF-----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
            FLV   ++  ++          S+A T       ++D  +G ++     +    PASLT
Sbjct: 18  IFLVAAFVSACASSGGSIDEAVYSVAPTTAKYAAIVVDEKSGKMLYGANVNELRYPASLT 77

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT Y++F  + + +    TPI IS+NA+  PPS    K G ++ +D A+++L+VKSAN
Sbjct: 78  KMMTVYMLFEAMDQGRISRDTPIPISRNAARRPPSKLGLKAGQSIPVDTAIRVLVVKSAN 137

Query: 118 DIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           D+A A+ E L    +  F   M   ++ LG+S T F NA G+      +TA DMA LS  
Sbjct: 138 DVATAVGEFLGGGSEARFADMMTAKARTLGMSRTTFKNASGLPDPDQVSTATDMARLSIA 197

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           ++ +FP +  YF    + + G+     N A+    GADG+KTG+T ASGFN+  S     
Sbjct: 198 LRRNFPHHYSYFGQTEVTVAGRTIKGHNKAMKMIPGADGLKTGYTRASGFNLATSVRHQG 257

Query: 237 QSLIAVILGALDRNTRNKVSASLLS 261
           +S++ V++G    + R+     L+S
Sbjct: 258 KSVVGVVMGEDKASIRDARMTQLMS 282


>gi|218896498|ref|YP_002444909.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|218543820|gb|ACK96214.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
          Length = 374

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAESVGGSIDGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGNES-FKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGAIAEINEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK     D  K+  
Sbjct: 292 KNSFSVPLTEEERKNVLLKVELDKSITLEDGVKVGK 327


>gi|228907200|ref|ZP_04071061.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
 gi|228852421|gb|EEM97214.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
          Length = 378

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 5   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAESVGGSIDGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGNES-FKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGAIAEINEKKYANHVYT 295

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K   DK     D  K+  
Sbjct: 296 KNSFSVPLTEEERKNVLLKVELDKSIALEDGVKVGK 331


>gi|268610236|ref|ZP_06143963.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus flavefaciens
           FD-1]
          Length = 386

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 66/344 (19%), Positives = 121/344 (35%), Gaps = 20/344 (5%)

Query: 1   MRQFLV-----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ ++      I + + S      +           L+  +TG ++           AS
Sbjct: 1   MKRIIITALAPFILLGVSSERKVSAAERPEVSARGAVLISADTGEIVFSENFSEKLPMAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK+MT  +           L     +  +A     S+    +G T+T       +++ S
Sbjct: 61  TTKIMTTLLCLE-----SGDLYDEFVVDSDAIHVEGSSMGLVEGDTVTKYALCVGMLLPS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND A A A  L  + + F   MN+ +K LGLS T+F+   G+   GH ++A DMA+L+ 
Sbjct: 116 GNDAANACAVKLAGSLENFAVMMNDKAKELGLSHTYFVTPSGLEGDGHGSSAYDMAMLAR 175

Query: 176 RIKTDFPQYMHYFQIKGL-----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +                      +   NTN  +  + G  G+KTGFT  +G  +V+
Sbjct: 176 EALRNEIFREICSSENMEIEFGAPPYKRWLKNTNKLLSMYDGVYGVKTGFTDEAGRCLVS 235

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           +  +  + LI V L   D         ++   GF    +                 ++  
Sbjct: 236 ACERDGKDLICVTLNDRDD---WNDHMAMYDYGFETAANVDIPVPDGYSVRLAGGESDTL 292

Query: 291 NISE--EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++S   E  T      + +            +   +K   +   
Sbjct: 293 SVSPECEYVTVTSMSEDTDDFSFGIVAPPFVYAPVKKGNAVAEL 336


>gi|260892761|ref|YP_003238858.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ammonifex degensii KC4]
 gi|260864902|gb|ACX52008.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ammonifex degensii KC4]
          Length = 374

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 128/336 (38%), Gaps = 19/336 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
            +I    +L  +    +           L++  +G    E        PASLTK+MT  +
Sbjct: 12  FLIFGCWLLGVVQVAWASPPEVTAEAAALMERQSGLFYYEKNATERRAPASLTKVMTCIL 71

Query: 65  VFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
                    A     +T+S+ A+          + G  + L   +K  ++ SAND  VAI
Sbjct: 72  ALE-----MADPEEVVTVSRRAAAISMGLVIDLRPGEQIKLRELIKAALIHSANDATVAI 126

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE++      FV+ MN  +  LGL  THF+N +G     H++TA+D+A L+     +   
Sbjct: 127 AEAVAGDHDTFVRWMNAKALLLGLEDTHFVNTNGYSHPEHWSTAKDLARLTRYALQNPTF 186

Query: 184 -----YMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                            +     NTN    G +    G+KTG T A+G  ++ASA  G+Q
Sbjct: 187 ASLVATRQAVVRWEKPQRELPISNTNRLLHGGYPQVTGVKTGTTQAAGQCLIASARSGEQ 246

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNIS 293
             +AV+L + +   R + + +LLS G     +    +           +  L +      
Sbjct: 247 EFVAVVLKSKN---RYRDAVALLSWGSKELKEVNLCDKGEYWTRLPVAEGRLGDVPLVAR 303

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           E +            Q+   +   +       +  +
Sbjct: 304 EGLSVLLPLGEPVEKQICLTRALRAPVYPGSPLGEV 339


>gi|307709107|ref|ZP_07645566.1| penicillin-binding protein 3 [Streptococcus mitis SK564]
 gi|307620053|gb|EFN99170.1| penicillin-binding protein 3 [Streptococcus mitis SK564]
          Length = 413

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 69/351 (19%), Positives = 137/351 (39%), Gaps = 31/351 (8%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +        +   ++ NTG ++ E     P   AS+TKL+T Y+V+  L+     
Sbjct: 17  ASTVAAQDFNIAAKHAIAVEANTGKILYEKDATQPVEIASITKLLTVYLVYEALENGSIT 76

Query: 76  LTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+AE +  +EK
Sbjct: 77  LSTPVDISDYPYQLTTNSEASNVPMEARNYTVEELLEATLVSSANSAAIALAEKIAGSEK 136

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIK 178
            FV  M       G+     +N  G+                  +  +A D+AI++  + 
Sbjct: 137 NFVDMMRAKLLEWGIKDATVVNTTGLNNETLGDNIYPGSNKDDENKLSAYDVAIVARNLI 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQ 234
             +PQ +   +       G    +TN+ +        G DG+KTG T  +G + V + ++
Sbjct: 197 KKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESFVGTTVE 256

Query: 235 GDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII------KDFYQQN 284
               +I V+L A     +  +R   ++SL+       T RK +                 
Sbjct: 257 KGMRVITVVLNADHQDNNPYSRFTATSSLMDYISSTFTLRKVVQQGDAYQDSKVPVQDGK 316

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                    E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 317 EDTVTAVAPEDIYLIERGGNQSSQSIQFTPDSKAIPAPLEAGTVVGHLTYE 367


>gi|255020661|ref|ZP_05292723.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969897|gb|EET27397.1| D-alanyl-D-alanine carboxypeptidase [Acidithiobacillus caldus ATCC
           51756]
          Length = 386

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 1/250 (0%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               LLD  T  V+ + + + P NP+ L KLMTAY++     +        + +S  A  
Sbjct: 44  QAAVLLDVQTDQVLMDEHGNRPLNPSGLVKLMTAYLLLQAEHQGLVRPDQNVQVSDRAWH 103

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S    + G  +T+    + L++   ND A+ IA+++  +   FV  MN  +  +GL 
Sbjct: 104 AQGSRMFIQPGLPVTVAQLERGLLIDGGNDAAIVIAQTVAGSVSGFVDLMNRDAAEMGLK 163

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            THF N  G+      +TA D+A L+  +  + P  +                N N   G
Sbjct: 164 HTHFANPDGLPAPDQRSTALDVARLARILIENHPSVLQVAGQPKYTYNHITQYNYNPLAG 223

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
              G +G+  G   +  +++  SA +  +SL+AV+LGA  R++    +++LL  GF+   
Sbjct: 224 E-KGINGLGVGLASSKHWDLAVSASRDGRSLVAVVLGAASRSSAGADASALLHYGFHGWQ 282

Query: 269 DRKKINYIIK 278
                    +
Sbjct: 283 QHTVYAAGAR 292


>gi|255654539|ref|ZP_05399948.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-23m63]
          Length = 409

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 147/352 (41%), Gaps = 22/352 (6%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++Q  ++ +    ++  F F       N      L+D  T  ++ E   D     ASL+K
Sbjct: 5   IKQLTILTLIFIFITPGFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSK 64

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND
Sbjct: 65  MMTFLLAIEAIDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGND 124

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTAR 168
            A+AIA+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA 
Sbjct: 125 AALAIAKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENISTAH 184

Query: 169 DMAIL---SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+  L    +    +    +   Q+     K   + NTN  + +  G DG+KTG+T  +G
Sbjct: 185 DIVTLGKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAG 244

Query: 226 FNIVASAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           + +  S +         +  LI V+LG  ++  R   SASLL  G  N   +K  +    
Sbjct: 245 YCLAFSMMIPKDAKNERNHRLIGVVLGDGNKKNRISSSASLLKYGKDNFHSKKIAHKGDI 304

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                    +   I  +V      +++ N  +      ++      K  ++ 
Sbjct: 305 IETPCVDGIDDFKIKVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 356


>gi|16079376|ref|NP_390200.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310236|ref|ZP_03592083.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221314560|ref|ZP_03596365.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221319482|ref|ZP_03600776.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221323758|ref|ZP_03605052.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321311791|ref|YP_004204078.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis BSn5]
 gi|461914|sp|P35150|DACB_BACSU RecName: Full=D-alanyl-D-alanine carboxypeptidase dacB;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein 5*; Short=PBP-5*; Flags:
           Precursor
 gi|410134|gb|AAA67490.1| penicillin-binding protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|2634754|emb|CAB14251.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|320018065|gb|ADV93051.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis BSn5]
          Length = 382

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 70/336 (20%), Positives = 127/336 (37%), Gaps = 18/336 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F   + + M+S +   ++      A         ++D  +G V+           AS
Sbjct: 1   MRIFKKAVFVIMISFLIATVNVNTAHAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     +   +T+S NA     S     +G  + L + +  L+++S
Sbjct: 61  ITKIMTAVLAIESGK-----MDQTVTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVAIAE +  +   FV  MN  ++ LG+  T F N HG+  H ++ +      +  
Sbjct: 116 GNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILT 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
           +       Y      K  + +  +    N        +  + G KTG+T  +   +V++A
Sbjct: 176 KYAMKLKDYQKISGTKIYKAETMESVWKNKNKLLTMLYPYSTGGKTGYTKLAKRTLVSTA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LIAV +   +          + +  F +               +         I
Sbjct: 236 SKDGIDLIAVTINDPND---WDDHMKMFNYVFEHYQTYLIAKKGDIPKLKGTFYESKAFI 292

Query: 293 SEEVC--TTQKEIINYNTQMKEAKDKESHFIDFEKI 326
             ++    T++E  N        K K++   D  KI
Sbjct: 293 KRDITYLLTEEEKENVKINTTLLKPKKAWEKDASKI 328


>gi|332524065|ref|ZP_08400317.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332315329|gb|EGJ28314.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 424

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 143/365 (39%), Gaps = 32/365 (8%)

Query: 1   MRQ--FLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++  +L++I + +LS +    F   A   +      ++ +TG ++ +   D     ASL
Sbjct: 21  MKKPIYLILICIFILSPLSHPVFADQALNLRAKEAIAVEYSTGKILYQKNSDRKVPIASL 80

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIV 113
           TK+MT Y+    +   +      + +SK A+     P  ++     ++ ++   +   +V
Sbjct: 81  TKIMTIYLTLKEINSGRLKWNDSVEMSKYATALANNPDISNPPLYKNSYSVKELVDSSMV 140

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ------------- 160
            S+N  A+A+AE +  +E KFV  M N  +  G++    +NA G+               
Sbjct: 141 VSSNSSAIALAEKIAGSEAKFVDKMKNQLETWGITDYQLVNASGLNNSMLNGHIYPGSSK 200

Query: 161 -HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADG 215
              +  +A+ +AI+S  +  D+P+ +       L        N+N  +        G DG
Sbjct: 201 KSENKLSAKSIAIVSRHLIKDYPEILTISSQNQLYWGNDILTNSNHLLPGNIMGRKGVDG 260

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKT--D 269
           +KTG T  +G   + +A+Q    +I VIL A     D N R   +  L    F +     
Sbjct: 261 LKTGTTTKAGQTYIGTAVQDKMRVIVVILNATDASKDSNARFVEANKLFDYSFQHYQKAT 320

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ-MKEAKDKESHFIDFEKITL 328
             K           N   +      +   T  + +N  T   K   +K+       K   
Sbjct: 321 IPKGKPFSTKLAISNAKQKTIAFKSKYDFTVIQPVNDQTIHYKIVPNKQHTVAPITKDEQ 380

Query: 329 LKNKI 333
           L   I
Sbjct: 381 LGKII 385


>gi|330820568|ref|YP_004349430.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia gladioli
           BSR3]
 gi|327372563|gb|AEA63918.1| Serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia gladioli
           BSR3]
          Length = 306

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 80/257 (31%), Positives = 126/257 (49%), Gaps = 9/257 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +          + ++D  +G V+ E+  D    PASLTKLMTAYVV   L+     L  
Sbjct: 34  AVGADSAIHAAAWLVVDGESGRVLGEHDADAERQPASLTKLMTAYVVLDALRRGALRLDE 93

Query: 79  PITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
            + +                   G ++T+++ +  LIV SAND A+ +A  +  +   F 
Sbjct: 94  TLRVDGADLADLGQDEARMYLVAGRSVTVEDLVDGLIVASANDAAMVLARRVGGSRAGFE 153

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           Q MN+T++ LG++ TH+    G+   G+++TARD+A L+ R+  DFP Y  Y   +    
Sbjct: 154 QRMNDTARRLGMTHTHYTTPSGITTPGNHSTARDLATLARRLTADFPVYYRYSARQQFAY 213

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD------QSLIAVILGALDR 249
            G    N NW +G+  G DG+KTG T A+G+ IVA+A +        + + AV+LGA   
Sbjct: 214 GGFHKRNKNWLLGSAPGVDGLKTGHTQAAGYCIVATARRRQAAPPMARRVFAVVLGAPSA 273

Query: 250 NTRNKVSASLLSMGFYN 266
           + R      LL   +  
Sbjct: 274 SARIDAGRRLLDEAYAQ 290


>gi|254974115|ref|ZP_05270587.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-66c26]
 gi|255091514|ref|ZP_05320992.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CIP
           107932]
 gi|255313242|ref|ZP_05354825.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-76w55]
 gi|255515932|ref|ZP_05383608.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-97b34]
 gi|255649025|ref|ZP_05395927.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-37x79]
 gi|306519141|ref|ZP_07405488.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-32g58]
          Length = 409

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 144/347 (41%), Gaps = 21/347 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++ +    ++ +F F       N      L+D  T  ++ E   D     ASL+K+MT  
Sbjct: 10  ILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSKMMTFL 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND A+AI
Sbjct: 70  LAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGNDAAIAI 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMAIL 173
           A+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA D+  L
Sbjct: 130 AKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENMSTAHDIVTL 189

Query: 174 SWRIKTDFPQYMHYFQIKG---LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
              +   +   +             K   + NTN  + +  G DG+KTG+T  +G+ +  
Sbjct: 190 GKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAGYCLAF 249

Query: 231 SAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S +         +  LI V+LG  ++  R   SA+LL  G  N   +K  +         
Sbjct: 250 SMMVPKDAKNERNHRLIGVVLGDGNKKNRISSSATLLKYGKDNFHSKKIAHKGDIIETPC 309

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   I+ +V      +++ N  +      ++      K  ++ 
Sbjct: 310 VDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 356


>gi|255099621|ref|ZP_05328598.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-63q42]
 gi|328887546|emb|CAJ67349.2| D-alanyl-D-alanine carboxypeptidase, S11 peptidase family
           [Clostridium difficile]
          Length = 409

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 75/347 (21%), Positives = 144/347 (41%), Gaps = 21/347 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++ +    ++ +F F       N      L+D  T  ++ E   D     ASL+K+MT  
Sbjct: 10  ILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSKMMTFL 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND A+AI
Sbjct: 70  LAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGNDAAIAI 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMAIL 173
           A+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA D+  L
Sbjct: 130 AKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENMSTAHDIVTL 189

Query: 174 SWRIKTDFPQYMHYFQIKG---LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
              +   +   +             K   + NTN  + +  G DG+KTG+T  +G+ +  
Sbjct: 190 GKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAGYCLAF 249

Query: 231 SAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S +         +  LI V+LG  ++  R   SA+LL  G  N   +K  +         
Sbjct: 250 SMMVPKDAKNERNHRLIGVVLGDGNKKNRISSSATLLKYGKDNFHSKKIAHKGDIIETPC 309

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   I+ +V      +++ N  +      ++      K  ++ 
Sbjct: 310 VDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 356


>gi|190891838|ref|YP_001978380.1| D-alanyl-D-alanine carboxypeptidase [Rhizobium etli CIAT 652]
 gi|190697117|gb|ACE91202.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli CIAT
           652]
          Length = 360

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 8/308 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +++ +TG V+     D  ++PASL KLMT  +VF  + + +  L T   +S+ A     +
Sbjct: 1   MIEASTGTVLLAKNEDEGFSPASLAKLMTMDLVFEAVTKGQITLDTEYPVSEYAWRTGGA 60

Query: 93  -----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                       S + +++ +K + ++ AND  + +AE +  +E++F + M   ++ +G+
Sbjct: 61  PSRTATMFAALKSRVRVEDLIKGIAIQGANDSCIILAEGMAGSEQQFAESMTRRAREIGM 120

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
               F N+ G+       TAR+M  L+  ++  +P    YF     E       N N  +
Sbjct: 121 EKAVFGNSTGLPGGKSKVTAREMVTLAAALQQSYPNLYPYFAQPDFEWNRIFQRNRNPLL 180

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
           G  LGADG+ TGFT   G++IVAS  +  + L   + G      R + +  +L  G    
Sbjct: 181 GLDLGADGLATGFTEGEGYSIVASVQRDGRRLFLALAGIASDKERTEEAKRVLEWGLTAF 240

Query: 268 TDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
            +R+       I         +  V  I++   +    + N +                +
Sbjct: 241 ENRQIFAEHEVIGAASVYGGTARTVDLIAKAPVSVYIPVSNPDRLSARIVYHWPLTAPVQ 300

Query: 325 KITLLKNK 332
                   
Sbjct: 301 PDYQAGTL 308


>gi|28211195|ref|NP_782139.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
 gi|28203635|gb|AAO36076.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
          Length = 374

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 81/343 (23%), Positives = 145/343 (42%), Gaps = 24/343 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE----------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           +  L  I   +  NI  +  +A                 Y  LD N+  V+A    +   
Sbjct: 5   KILLYFICFIITININTYSVLANQHLNKKENKLNVNARAYIALDANSKVVLAGRNSEVIM 64

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS TK++TA V   +       L   + IS  AS    S + +KKG  ++L   L  L
Sbjct: 65  PMASTTKILTALVTLKY-----GDLDKMVEISPKASSIRGSVAGYKKGEEISLKELLFGL 119

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +++S ND A+AIAE +  +E++FV+ MN  + +LGL  +HF + HG+    HY+T  D+A
Sbjct: 120 MLRSGNDAAIAIAEGVAGSEEEFVRLMNEYAASLGLIDSHFCSPHGLDSAEHYSTVYDLA 179

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGK----KYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           IL+       P +      K +          Y N N  +     A G+KTG+T  +G  
Sbjct: 180 ILTAES-KKHPLFHEIVSTKDITKDKYSFSRDYHNINKILWQLPNATGVKTGYTGGAGKC 238

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           +V+S     + +I V+L       R K +  + +    N   +K  +             
Sbjct: 239 LVSSVDISGREVIIVVLDCPG---RWKETTKVNNYVKKNYEYKKLHSKGEVVAKAPKDKK 295

Query: 288 EVPNI-SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +  +  E++    ++  +Y+ ++    +   +  + +K+  +
Sbjct: 296 NIDLVCKEDIIIPTEKGTDYSVKINVPNEINHNIYEGDKVGSI 338


>gi|150391165|ref|YP_001321214.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
 gi|149951027|gb|ABR49555.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alkaliphilus
           metalliredigens QYMF]
          Length = 257

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 5/244 (2%)

Query: 27  KLPYYTLLDTN-TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                 L   +    V+ + +       AS+TKLMT  V+   +   K   T  + +S  
Sbjct: 9   NARAAILFKASPNNKVLFQKHATKRLPIASITKLMTMLVLLDGIDAGKIKWTDKVEMSPA 68

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+    S    K G  + + +  K +I+ SAND A+A+AE L  T   F+  MN  +K L
Sbjct: 69  AASLYGSKIHLKPGEKLPVGDMFKSMIIASANDAAIALAEHLSGTMDNFIDKMNQKAKTL 128

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIKGKKYP 201
           GL  +HF+N+HG+ +  HY++A D+  +               + Y  I+  + + +K  
Sbjct: 129 GLKNSHFVNSHGLFEDNHYSSAIDIVKMVSMALRREEILKYSRLKYDYIRKEDNQLQKLV 188

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           NTN  +GT    DG+KTG+T  +G  + A+A++ +  LIAV+LG   +  R+K    +L+
Sbjct: 189 NTNKLIGTIPEVDGLKTGYTPLAGCCLAATALKDNVRLIAVVLGEPRKAVRDKEVIEMLN 248

Query: 262 MGFY 265
            GF 
Sbjct: 249 YGFK 252


>gi|296332253|ref|ZP_06874715.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674955|ref|YP_003866627.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150567|gb|EFG91454.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413199|gb|ADM38318.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 382

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 123/328 (37%), Gaps = 16/328 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F   + M M+S +   ++      A         ++D  +G V+           AS
Sbjct: 1   MRIFKKAVFMVMISFLIANVNVNTAHAAIDVSAKSAIVIDGASGRVLFAKDEHEKRRIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MTA +     K     +   +T+S NA     S     +G  + L + +  L+++S
Sbjct: 61  ITKIMTAVLAIESGK-----MDETVTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            ND AVAIAE +  +   FV  MN  ++ LG+  T F N HG+  H ++ +      L  
Sbjct: 116 GNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMENTRFQNPHGLDDHENHYSTAYDMALLT 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKK--YPNTNWAVGT-FLGADGMKTGFTCASGFNIVASA 232
           +       Y      K  + +  +  + N N  +   +  + G KTG+T  +   +V++A
Sbjct: 176 KYAMKLKDYQKISGTKIYKAETMESVWKNKNKLLTMLYRYSTGGKTGYTKLAKRTLVSTA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LIAV +   D          + +  F +               +         I
Sbjct: 236 SKDGIDLIAVTINDPDD---WDDHMKMFNYVFDHYQTYLIAKKGDIPKLKGTFYESKAFI 292

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHF 320
             ++     E    +  ++    K    
Sbjct: 293 KRDITYLLTEEEKEDVNIQTTLLKPKKT 320


>gi|291086840|ref|ZP_06344603.2| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
 gi|291077111|gb|EFE14475.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
          Length = 516

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 65/341 (19%), Positives = 122/341 (35%), Gaps = 35/341 (10%)

Query: 17  FPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            P  +  E           L+D  TG ++ E         AS TK+MT  +         
Sbjct: 140 LPAQAKPEEDFKLYAQSAVLMDAGTGRILYEKDGKTKRPMASTTKIMTCILALEE----- 194

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 +T+S  A+  P      ++G    L + L  L+++S ND AVA+AE +  + ++
Sbjct: 195 GSPEDLVTVSSYAASMPDVQLNIREGEQYYLKDLLYSLMLESHNDTAVAVAEHIAGSVEE 254

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHG------HYTTARDMAILSWRIKTDFPQYMHY 187
           F   MN  ++++G + T F+  +G+          H TTA D+A +     T  P+   +
Sbjct: 255 FAVLMNQKARDIGCTDTWFVTPNGLDGADGPQQTPHSTTAEDLARIMSYCITQSPKREEF 314

Query: 188 FQIKGLEI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            ++              +     N N  +     A   KTGFT A+G+  V +     ++
Sbjct: 315 IELTRTASHSFADREGKRSFYCANHNAFLTMMPEALTGKTGFTGAAGYCYVGAVQDEGRT 374

Query: 239 LIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---------DFYQQNLS 286
            +  +LG      +  +     +L S        R+                   +  L 
Sbjct: 375 FVVSLLGCGWPPHKTYKWSDMKTLSSYALREYGWREVFESGKTFPDAAVKDGVAEKTGLV 434

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
             VP   + +    +E    + + +   + E+       + 
Sbjct: 435 LAVPKEEQTLRVLMREGEEADIRYRYPSELEAPVAAGTPVG 475


>gi|153814792|ref|ZP_01967460.1| hypothetical protein RUMTOR_01007 [Ruminococcus torques ATCC 27756]
 gi|145847823|gb|EDK24741.1| hypothetical protein RUMTOR_01007 [Ruminococcus torques ATCC 27756]
          Length = 426

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 130/345 (37%), Gaps = 32/345 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                          L+D  TG ++     D     AS TK+MT  +           L+
Sbjct: 52  SIKVKPSDLYARSAVLMDAETGRILFGKNKDEQMPMASTTKIMTCILALEN-----GNLS 106

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               +S  AS  P       +G T  L + L  L+++S ND AVAIAE +     KF   
Sbjct: 107 DKAEVSSVASAQPKVKLGMTQGQTFYLKDLLYSLMLESHNDSAVAIAECIAGNVDKFADM 166

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  LG ++T+F+  +G+        H+TTA ++A +      + PQ   + +I   
Sbjct: 167 MNKKASQLGCNSTYFITPNGLDGQDENGIHHTTAEELARIMRYCIMESPQKEKFLEITRA 226

Query: 194 EI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           +          K     N N  +    GA   KTGFT  +G+  V +  +  ++LI  +L
Sbjct: 227 DAYTFTDCKGEKSYSCVNHNTFLKMMDGALSGKTGFTQDAGYCYVGALRKDGKTLIVALL 286

Query: 245 GALDRNT---RNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVC 297
                N    +   +  L++ G  N   ++    KI+   K + +   +   P   +++ 
Sbjct: 287 ACGWPNNKGYKWSDTKKLMTYGMENYCYKEISPDKIDRTEKIYIKNGYTGGFPKKGKDLL 346

Query: 298 TTQKEIINYNTQMKEAKDKESHF-------IDFEKITLLKNKITK 335
             +    +    +      E             +K T++   + +
Sbjct: 347 EVEISGESKKILVGADDKDEIEIKIKKEICAPIKKGTVIGEIVYR 391


>gi|307942276|ref|ZP_07657627.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Roseibium sp.
           TrichSKD4]
 gi|307774562|gb|EFO33772.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Roseibium sp.
           TrichSKD4]
          Length = 389

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/336 (22%), Positives = 129/336 (38%), Gaps = 8/336 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L I             +       P   L++  TG V+     +  + PA L+++MTA  
Sbjct: 12  LCIALFGCCVAAPITSAETLDTAAPMAFLMEVKTGSVLYAKAAEKTFQPAGLSRIMTAAT 71

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  LK+ +        +S++A          +    + GS++++ + LK L+V  A+D 
Sbjct: 72  VFKALKDVEVTEAQECKVSEHAWRTGGAPAGGTTMFAELGSSISVLDLLKGLLVHQAHDA 131

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ +AE L   EK F   M   ++ +GL+ + F++  G    G  TT  DMA L + +  
Sbjct: 132 AIILAECLDGDEKTFADRMTAYAREIGLTNSQFLSPAGFDVDGAATTVEDMATLGFHMLQ 191

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +FP     F +           N N  +G   G DG+ TG +   GF  +AS  +  + +
Sbjct: 192 EFPDRYPLFALNEFTWNDIYQRNRNPLIGEMRGLDGLGTGSSEKGGFASLASLNRDGRRV 251

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISEEV 296
           IAV+ G+     R K    ++   +   + R+  +             + +EVP I+E  
Sbjct: 252 IAVVAGSPSAKARIKALKQVVDGAWDYFSVRQLYSKGDVVAMARVFGGIESEVPLIAERN 311

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                                      E    +   
Sbjct: 312 IAVLLPKSGALGYKLRVTYSGPVVAPVEPGKRVGKL 347


>gi|289167763|ref|YP_003446032.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 3
           [Streptococcus mitis B6]
 gi|288907330|emb|CBJ22167.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 3
           [Streptococcus mitis B6]
          Length = 413

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 68/351 (19%), Positives = 137/351 (39%), Gaps = 31/351 (8%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +        +   ++ NTG ++ E     P   AS+TKL+T Y+V+  L+     
Sbjct: 17  ASTVAAQDFNITAKHAIAVEANTGKILYEKEATQPVEIASITKLLTVYLVYEALENGSIT 76

Query: 76  LTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+AE +  +EK
Sbjct: 77  LSTPVDISDYPYKLTTNSEASNVPMEARNYTVEQLLEATLVSSANSAAIALAEKIAGSEK 136

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIK 178
            FV  M       G+     +N  G+                  +  +A D+AI++  + 
Sbjct: 137 DFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDDENKLSAYDVAIVARNLI 196

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQ 234
             +PQ +   +       G    +TN+ +        G DG+KTG T  +G + V + ++
Sbjct: 197 KKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESFVGTTVE 256

Query: 235 GDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII------KDFYQQN 284
               +I V+L A     +   R   ++SL+       T RK +                 
Sbjct: 257 KGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQKGDAYQDSKAPVQDGK 316

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +       +++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 317 ENMVTAVAKDDISLIERVGSQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYE 367


>gi|312127682|ref|YP_003992556.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777701|gb|ADQ07187.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 451

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 77/349 (22%), Positives = 142/349 (40%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F ++    + +      +           L++ +TG ++ E  P+    PAS TK++TA 
Sbjct: 19  FAILFTYPLYTYSQQESTDKLGLSAKSAILVEAHTGQILFEKNPNLICFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L     +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----DLNKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++  +  +FV+ MN  +K++G   +HF+N +G+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENIAGSIPEFVEKMNEYAKSIGAENSHFVNPNGLHSPQHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         + + +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 ILRKIFSTVEYRITTASMHKKPEWQIIYNINKLLRKNSKYYYPYATGIKTGYTAQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + D  LIAVIL           +  L + GF N    K  +              
Sbjct: 255 IASAKKDDIELIAVIL---SSEDAFSDAIKLFNYGFNNFKREKLFSENQIVGKVLIDKTN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKD-----KESHFIDFEKITLLKNK 332
              +   + T    + N  +  +          +   I   K T++ N 
Sbjct: 312 HKWLDGYLKTPVYVLQNVYSPAESDLTYTVDFLKDLKIPIYKDTVIGNV 360


>gi|229084569|ref|ZP_04216839.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
 gi|228698719|gb|EEL51434.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
          Length = 373

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 146/343 (42%), Gaps = 16/343 (4%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAE--TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           MR+ ++VI  + M ++I P  + A+          LL+ ++G V+       P   AS+T
Sbjct: 1   MRRTWIVIALIVMCASIIPIHTYAQMNDVSARNAILLEEHSGRVLYGKSEHEPQKIASIT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA +     + ++A+      IS  A     S    K G+ + L++ +  L+++S N
Sbjct: 61  KIMTALLAAESGRMREAVP-----ISDKAVRVEGSAIYLKPGNKVPLEDLVYGLLLRSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWR 176
           D A AIAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+  
Sbjct: 116 DAAQAIAENVGGSIEGFVYMMNEKAKQIGMEDTHFSNPHGLDGDGTHYSSAYDMALLTRY 175

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAI 233
              +   +   F  K  + K   YP  N        +  A G KTGFT  +G  +V +A 
Sbjct: 176 AMGN-ETFRKIFGTKTYQSKAWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTAS 234

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +    LI V L A +          L + GF      K +        ++          
Sbjct: 235 KDGLDLIVVTLNASND---WDDHMYLFNQGFKQYELTKVLGQGALSGLKEKKYINHVYTK 291

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +              +K   DK +   + EK+      + K+
Sbjct: 292 NDFSVPLTVGERKEVLLKVELDKNAKLKNGEKVGKTIIYVGKE 334


>gi|317128528|ref|YP_004094810.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473476|gb|ADU30079.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           cellulosilyticus DSM 2522]
          Length = 377

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 16/317 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI--AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++ +  I ++ L       +             L++  +G V+ E         AS+TK+
Sbjct: 3   KKIIAFILISTLFTDITASAATYPGNVSARGAILMEQESGRVLYEKEAHTQMRIASITKI 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA +     +     L   +T+S NA     S+        + L + +  L+++S ND 
Sbjct: 63  MTAILAIESGE-----LDEWVTVSSNAEGTEGSSIYLVAEEEIQLRDLVYGLMLRSGNDS 117

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIK 178
           AVAIAE +  + + FV  MN  ++ LG++ T F N HG+  H  HY+TA DMA+L+    
Sbjct: 118 AVAIAEHVGGSLEGFVYMMNEKAQELGMTRTVFSNPHGLDDHEEHYSTAYDMALLTRYAM 177

Query: 179 TDFPQY----MHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAI 233
            +           ++ K  +   + + N N  +   +  + G KTG+T  +   +V++A 
Sbjct: 178 DNEEYKEIAGTKSYRSKNKDDHYRVFNNKNRLLTQLYRNSTGGKTGYTKRAKRTLVSTAE 237

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           + D  LIAV + A D         S+    F        ++  +             N  
Sbjct: 238 KEDVELIAVTINAPDD---WNDHISMFEWAFSTFNLTTIVSDGLLTNINDEYYRNKVNAE 294

Query: 294 EEVCTTQKEIINYNTQM 310
                   E      ++
Sbjct: 295 YSFEYPVAENEEIEKKI 311


>gi|294673565|ref|YP_003574181.1| serine-type D-Ala-D-Ala carboxypeptidase [Prevotella ruminicola 23]
 gi|294471981|gb|ADE81370.1| serine-type D-Ala-D-Ala carboxypeptidase [Prevotella ruminicola 23]
          Length = 280

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 11/245 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +     + L+D +TG VI+E         AS+TK+MTA +           L+  I I++
Sbjct: 31  SLTADAWMLVDDSTGIVISEKCGFERRYMASITKMMTALIALEK-----GNLSDSIDITE 85

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +      S    + G    + + +  +++ S ND A A+A+ +     +F   MN  ++ 
Sbjct: 86  DVFINRDSR--VRLGQGYVMLDLIYEMMMISDNDAAYALAKHVGGDTLRFYDLMNQKAQY 143

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----QYMHYFQIKGLEIKGKKY 200
           LG+ +THF N +G+    ++++A D+  L+     D             +   + +    
Sbjct: 144 LGMDSTHFANPNGMPNDNNFSSAADLVKLARYAMRDTMFASIVGTAEKAVPLTDGRHMDC 203

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N+N  + T+ G  G+KTG+T  +G+ + +SA +   +L  V+L +    TR   SA+LL
Sbjct: 204 RNSNALLHTYEGCIGIKTGYTRQAGYCLASSATRNGHTLYLVLLNSRRHATRFTESAALL 263

Query: 261 SMGFY 265
             GF 
Sbjct: 264 DYGFR 268


>gi|229166411|ref|ZP_04294167.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228616985|gb|EEK74054.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
          Length = 382

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 84/336 (25%), Positives = 134/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 9   MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQGSGRVLYGKAEHEPQKIASI 68

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 69  TKIMTALLAAESGKMK-----EMVAVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 124 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 183

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 184 YAMGN-ETFKGIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 242

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 243 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERYKQAKVLGQGALAEINEKKYANHVYT 299

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    +  +K   DK +   D  KI  
Sbjct: 300 KNSFSVPLTEEERKSVLLKVELDKSAKLTDGVKIGK 335


>gi|291540307|emb|CBL13418.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis XB6B4]
          Length = 299

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 20/285 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L+  +M +      +         P   +++ +TG V+ +        PAS+TK+MT  
Sbjct: 2   ILLTGSMCIPVYAAEYWPEGPEVVSPNVIVMEASTGTVLYDCDSLEAHYPASITKIMTTL 61

Query: 64  VVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +           L   +T S         S      G  MT++  L  +++ SAN+ A A
Sbjct: 62  IALENSD-----LNDIVTFSDAAIDNTEGSGIARDYGEQMTMEQCLYAVMLASANECAYA 116

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE +  T + FV  MN  +K LG   THF N HG+    HYT   DMA+++     +  
Sbjct: 117 VAEHVGGTIENFVAMMNEKAKELGCQNTHFANPHGLHDENHYTCCYDMALIARAAYQNET 176

Query: 183 QY------MHYFQIKGLEIKGKKYPNTNWAVGT-------FLGADGMKTGFTCASGFNIV 229
                    +         +     N N  +         + G  G KTG+T A+   +V
Sbjct: 177 FRIIVGTARYTIPPTNKHAEQTDLQNHNEMLYPFQTNKYVYDGCTGGKTGYTNAANSTLV 236

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
             A +   +LI V++     N     S +L    F N        
Sbjct: 237 TYAERDGMTLICVVMNTQSPNQ-WLDSRNLFDYCFDNFQLFNIAE 280


>gi|260437075|ref|ZP_05790891.1| serine-type D-Ala-D-Ala carboxypeptidase [Butyrivibrio crossotus
           DSM 2876]
 gi|292810384|gb|EFF69589.1| serine-type D-Ala-D-Ala carboxypeptidase [Butyrivibrio crossotus
           DSM 2876]
          Length = 396

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 76/371 (20%), Positives = 142/371 (38%), Gaps = 41/371 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ L +I +A++                    L+D ++G ++     +     AS TK+
Sbjct: 1   MKKILAVIIIAVVMCQSVTKGEEPENLYARAAILIDADSGRILYGKNENDVMPMASTTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT  V   +        +  +T S  A++ P       KG   TL+  L L++++S ND+
Sbjct: 61  MTLLVALKY-----GNPSDRVTFSSYAAKEPDVQLNALKGEQYTLNELLYLMMLRSYNDV 115

Query: 120 AVAIAES-----------------LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           A+ +AE                    +  K+F+  MN  +  LGLS T+F+  +G+    
Sbjct: 116 AMMVAEYVGGVLNGDTSPNNTTEESKEDVKRFIDEMNGYAVKLGLSDTYFVTPNGLDGED 175

Query: 163 ----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK------KYPNTNWAVGTFLG 212
               H TTA ++A+++        + +     K    + +         N N  +     
Sbjct: 176 EGRIHSTTAYELALIAREAL-KSEEVIKICTTKSFSYREQNGKRSGTVTNGNRFLDINKN 234

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD 269
           A GMKTGFT  +G+  V +    D++ I+V+LG     ++N +   +  L+S G  N   
Sbjct: 235 AIGMKTGFTGKAGYCFVGATKVDDRTFISVVLGCGWPPNKNYKWADTGKLMSYGRDNYFY 294

Query: 270 RKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           R                    +    I  EV     +    +   +     ++     E+
Sbjct: 295 RNIFEKTYDYKEIKVENGLQESVGTYIPFEVNRLLSDEDEVDVIYEIISKAKAPVKKDEQ 354

Query: 326 ITLLKNKITKK 336
           +  ++  I  K
Sbjct: 355 VGKVRIYINGK 365


>gi|52080833|ref|YP_079624.1| D-alanyl-D-alanine carboxypeptidase [Bacillus licheniformis ATCC
           14580]
 gi|52786204|ref|YP_092033.1| DacB [Bacillus licheniformis ATCC 14580]
 gi|319645208|ref|ZP_07999441.1| DacB protein [Bacillus sp. BT1B_CT2]
 gi|52004044|gb|AAU23986.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus licheniformis ATCC 14580]
 gi|52348706|gb|AAU41340.1| DacB [Bacillus licheniformis ATCC 14580]
 gi|317393017|gb|EFV73811.1| DacB protein [Bacillus sp. BT1B_CT2]
          Length = 384

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 76/345 (22%), Positives = 135/345 (39%), Gaps = 19/345 (5%)

Query: 1   MRQFL------VIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR FL      ++I   + S+     +            ++D  +G V+           
Sbjct: 1   MRFFLKQAAAAIMICSLLCSSYETAQAQPSLHISAKSAIVMDGQSGRVLFAKDEHEKRRI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS+TK+MTA +     K     L   +T+S  A     S+     G  + L + +  L++
Sbjct: 61  ASITKIMTAILAVESGK-----LDETVTVSDRAVRTEGSSIYLTSGQKVKLKDLVYGLML 115

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAI 172
           +S ND AVAIAE +  + + FV  MN  +  LG+  T F N HG+  H  HY++A DMA+
Sbjct: 116 RSGNDAAVAIAEHVGGSLEGFVYMMNQKAAELGMENTLFRNPHGLDDHPDHYSSAYDMAL 175

Query: 173 LSWRIKTDFPQYMHYFQIKGL-EIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVA 230
           L+    T+          +   E     + N N    G +  + G KTG+T  +   +V+
Sbjct: 176 LTKYAMTNETYKKIAGTKRYKAETMQGIWRNKNKLLTGLYKYSTGGKTGYTKLAKRTLVS 235

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           ++ +    LIAV + A D         ++ +  F +               + +      
Sbjct: 236 TSSKDGTDLIAVTINAPDD---WNDHMNMFNYVFGHYKTYIIAKKGEIPKLKDSFYGNKA 292

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            I  +V     E    + ++   +  E      +    + + I +
Sbjct: 293 FIKRDVTYLLNEEEKEDVKVDI-ELLEPKKSWRKNKKEIPDIIGE 336


>gi|206967983|ref|ZP_03228939.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|206736903|gb|EDZ54050.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
          Length = 374

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 85/336 (25%), Positives = 132/336 (39%), Gaps = 17/336 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + M+ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 1   MRRICVIITLLMMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 61  TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 116 NDAAQVIAESVGGSIDGFVYLMNQKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 175

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 176 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 234

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 235 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGAIAEINEKKYANHVYT 291

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    E    N  +K    K     D  K+  
Sbjct: 292 KNSFSVPLTEEEKKNVVLKVELHKSIKLTDGVKVGK 327


>gi|58698116|ref|ZP_00373039.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535362|gb|EAL59438.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 310

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 5/280 (1%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+ F +LK     +     +S+ A E   S+   K+G  +T+   L+ + + S ND 
Sbjct: 1   MTLYIAFDYLKAGIIHMEDKFRVSRKAWERKGSSMFLKEGQFVTVRELLEGITIVSGNDA 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            + +AE +  +E+ FV  MN  ++NL L+ +HF+N+ G     H+ +A+D+ +L+ RI T
Sbjct: 61  CITLAEGIAGSEENFVAEMNEVAQNLNLNDSHFVNSSGWPDGDHFMSAKDLVMLAKRIFT 120

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           DFP+Y   F  + L        N N  +   +G DG+KTG+T A G+ IVASA + D+ +
Sbjct: 121 DFPEYYDLFSEQYLTYNEIVQKNKNLLLFHDIGVDGLKTGYTNAGGYGIVASAKRNDRRI 180

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI----IKDFYQQNLSNEVPNISEE 295
            AV+ G      R + +  L+     +   +K           +            ++ +
Sbjct: 181 FAVVNGLNTEKERIEEAKRLIQYSLNHFNTKKIFAQDSVVEEVNVLYGKDKKVPITVAND 240

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           V  T    ++   +++  + K+      +K   +     +
Sbjct: 241 VTITYNRKLHDQIKVRI-EYKDMIPAPIKKGQEVGKVFVE 279


>gi|213019298|ref|ZP_03335105.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|212995407|gb|EEB56048.1| D-alanyl-D-alanine carboxypeptidase [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 310

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 5/280 (1%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT YV F +LK     +     +S+ A E   S+   K+G  +T+   L+ + + S ND 
Sbjct: 1   MTLYVAFDYLKAGIIKMEDKFRVSRKAWERKGSSMFLKEGQFVTVKELLEGITIASGNDA 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            +A+AE +  +E+ FV  MN  +++L L+ +HF+N+ G     H+ +A+D+  L+ RI T
Sbjct: 61  CIALAEGIAGSEENFVAEMNEVAQDLNLNDSHFVNSSGWPDENHFMSAKDLVTLAKRIFT 120

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           DFP+Y   F  + L        N N  +   +G DG+KTG T A G+ I+ SA + D+ +
Sbjct: 121 DFPEYYDLFSEQYLTYNDIVQKNKNLLLFHDIGVDGLKTGHTSAGGYGIIVSAKRNDRRI 180

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEE 295
            AV+ G      R + +  L+     +   +K           +            ++ +
Sbjct: 181 FAVVNGLDTEKERIEEAKRLIQYSLNHFNTKKIFAKDSVVEEINIVYGKDKKVPVTVAND 240

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           V  T    ++   +++  + K+      +K   +     +
Sbjct: 241 VTITYNRRLHDKIKVRI-EYKDMVPAPIKKGQEVGKIFVE 279


>gi|25010218|ref|NP_734613.1| hypothetical protein gbs0143 [Streptococcus agalactiae NEM316]
 gi|23094570|emb|CAD45788.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 411

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/362 (20%), Positives = 146/362 (40%), Gaps = 31/362 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +  I+ ++ +  +    + +      Y   +D ++G ++ E   + P   ASLTK+
Sbjct: 1   MKKIITSILLLSCIFFMPTISAESFNASAKYALAVDLDSGKILYEKDANRPAAIASLTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MT Y+V+  +        T + IS    +      +++   +    T+   +   ++ SA
Sbjct: 61  MTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRESDASNVPLEKRRYTVKQLVDAAMISSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HG 162
           N  A+A+AE +  TE KFV  M    +  G+  +H +NA G+                  
Sbjct: 121 NSAAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +ARD+AI+++ +  ++P  +        +       + N+ +        G  G+KT
Sbjct: 181 NKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + +A++ +    L+ VI+ A     D+  R   + SLL+           + 
Sbjct: 241 GTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLA 300

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                   +     V +  E+      +      Q K    +    I+F+K   L   IT
Sbjct: 301 KGAT---YKGKEASVRDGKEQSVIAVAKNDLKVAQKKNITKQNQLKINFKK--ELTAPIT 355

Query: 335 KK 336
           KK
Sbjct: 356 KK 357


>gi|228990579|ref|ZP_04150544.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
 gi|228769105|gb|EEM17703.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
          Length = 373

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 16/343 (4%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAE--TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           MR+ ++VI  + M +++ P  + A+          L++ ++G V+           AS+T
Sbjct: 1   MRRTWIVIALIIMCASVIPIHTYAQMNDVSAHNAILMEEHSGRVLYGKLEHESQKIASIT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA +     K K+ +      IS  A     S    + G  + L++ +  L+++S N
Sbjct: 61  KIMTALLAAESGKMKEVVP-----ISDKAVRVEGSAIYLQPGKKVPLEDLVYGLMLRSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWR 176
           D A AIAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+  
Sbjct: 116 DAAQAIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGTHYSSAYDMALLTRY 175

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAI 233
              +   +   F  K  + K   YP  N        +  A G KTGFT  +G  +V +A 
Sbjct: 176 AMGN-ETFRKIFGTKTYQSKMWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTAS 234

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +    LI V L A +          L   GF      K +        Q+        I 
Sbjct: 235 KDGLDLIVVTLNASND---WDDHMYLFDQGFKQYELTKVLGQGALSGLQEKKYTNHVYIK 291

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +      +       +K   D+ +  +D EK+      I ++
Sbjct: 292 NDFAIPLTKDEKKQVMLKVELDRSAKLVDGEKVGKTIVYINEE 334


>gi|255305505|ref|ZP_05349677.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile ATCC
           43255]
          Length = 409

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 21/347 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++ +    ++ +F F       N      L+D  T  ++ E   D     ASL+K+MT  
Sbjct: 10  ILALIFIFITPVFAFADTPPVPNSSRAALLIDQETKRILFEKNIDEKMPLASLSKMMTFL 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    + + +   T  + I K+ +    S    K G  ++L   ++ L++ S ND A+AI
Sbjct: 70  LAIEAVDKNQVKETDMVKIDKSTASVGGSTCKLKDGDEISLGELMQGLMLVSGNDAAIAI 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMAIL 173
           A+ + KTEK FV  MN  ++ +G+  T++ N +G+  +           + +TA D+  L
Sbjct: 130 AKHIGKTEKNFVNMMNKKAEEIGMIDTYYFNPNGLPIYTDPEHKEPPIENMSTAHDIVTL 189

Query: 174 ---SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               +    +    +   Q+     K   + NTN  + +  G DG+KTG+T  +G+ +  
Sbjct: 190 GKYMYDHYENQVTRITTMQVYNDTKKDFTHYNTNPLLVSVPGVDGIKTGYTDNAGYCLAF 249

Query: 231 SAI-----QGDQ--SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S +     + ++   LI V+LG  ++  R   SASLL  G  N   +K  +         
Sbjct: 250 SMMVPKDAKNERSHRLIGVVLGDGNKKNRISSSASLLKYGKDNFHSKKIAHKGDIIETPC 309

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               +   I+ +V      +++ N  +      ++      K  ++ 
Sbjct: 310 VDGIDDFKITVKVDKDLYGVVSDNENINPKVVFKNMNYPIHKGDIVG 356


>gi|22536332|ref|NP_687183.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|76787943|ref|YP_328878.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae A909]
 gi|22533156|gb|AAM99055.1|AE014198_3 D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae 2603V/R]
 gi|76563000|gb|ABA45584.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae A909]
          Length = 411

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 146/362 (40%), Gaps = 31/362 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +  I+ ++ +  +    + +      +   +D ++G ++ E   + P   ASLTK+
Sbjct: 1   MKKIITSILLLSCIFFMPTISAESFNASAKHALAVDLDSGKILYEKDANKPAAIASLTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MT Y+V+  +        T + IS    +      +++   +    T+   +   ++ SA
Sbjct: 61  MTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRESDASNVPLEKRRYTVKQLVDAAMISSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  TE KFV  M    +  G+  +H +NA G+                  
Sbjct: 121 NSAAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMKT 218
           +  +ARD+AI+++ +  ++P  +        +       + N+ +        G  G+KT
Sbjct: 181 NKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + +A++ +    L+ VI+ A     D+  R   + SLL+           + 
Sbjct: 241 GTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLA 300

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                   +     V +  E+      +      Q K    +    I+F+K   L   IT
Sbjct: 301 KGAA---YKGKEASVRDGKEQSVIAVAKNDLKVVQKKNITKQNQLKINFKK--ELTAPIT 355

Query: 335 KK 336
           KK
Sbjct: 356 KK 357


>gi|312897814|ref|ZP_07757230.1| D-alanyl-D-alanine carboxypeptidase domain protein [Megasphaera
           micronuciformis F0359]
 gi|310621198|gb|EFQ04742.1| D-alanyl-D-alanine carboxypeptidase domain protein [Megasphaera
           micronuciformis F0359]
          Length = 277

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 12/270 (4%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +  +  A+     +    +   T       L+D +TG ++ +  P+   +PAS TK++T 
Sbjct: 9   RMALFTALLWAVTVIVASAAVPTTGAEAACLIDADTGRILYQVNPNKWVHPASTTKIVTM 68

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
                        L  PI IS+ A++  PS      G  +TL  A++ ++V S ND+AVA
Sbjct: 69  LTALDK---GADKLDQPIHISQYAADTEPSVLGIAPGDKLTLREAMRGMMVVSGNDVAVA 125

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +AE+L  T   +   MN  +  LG + THF+N +G+    HYTTA DMA ++      +P
Sbjct: 126 VAETLGGTVGAYADMMNAEAAKLGATHTHFVNPNGLTAPKHYTTAVDMAKIAAYGLKHYP 185

Query: 183 QYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           ++ +   +    +K              +    + GADG+KTG+T A+G  +VASA +  
Sbjct: 186 EFKYTVSLPNYTVKYLDGRTKYVETTNRFLTSGYKGADGVKTGYTDAAGVCLVASATRNG 245

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +L+  +      + R   + ++L  GF  
Sbjct: 246 HTLVVSLFN---DDNRWTDAPAILDYGFRR 272


>gi|50084374|ref|YP_045884.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter sp. ADP1]
 gi|49530350|emb|CAG68062.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter sp. ADP1]
          Length = 436

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 86/309 (27%), Positives = 150/309 (48%), Gaps = 14/309 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F  I+++  L       +       E+ +   ++++D  +G +I+E+       PAS
Sbjct: 1   MRLFFSILSLFSLLCASVAHANLLNIAPESVEAEAWSIVDAQSGQIISEHNSHIQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    LK  K   T  +T +   N   +  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYITLKELKAGKLHKTDILTATPVVNMVMWDESQMYLKPGEQISIDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      F++ MN  ++ LG+  T+F N  GV    HY+T+ D+A+L
Sbjct: 121 MSANDAAVTLAERISGNVPDFLKRMNQEAQALGMKDTYFSNPAGVTMPDHYSTSHDLALL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I    P Y+ Y ++     + + +  TN A+     ADG+KTG+T A+G+N+  +A 
Sbjct: 181 AQAIVKQTPDYLSYSKLPSFSYQQRFHRATNLALKIDPTADGLKTGYTKAAGYNLALTAK 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +        D+ +I V+LG  + + R +V+  L+++ +    D + I           + 
Sbjct: 241 RPTMNVDIPDRRMIVVVLGTKNAHKRAEVANKLMNLAYAYTRDEEVIKNNQTIAELPVIK 300

Query: 287 NEVPNISEE 295
           + +     E
Sbjct: 301 STLKMFKVE 309


>gi|317500314|ref|ZP_07958539.1| serine-type D-Ala-D-Ala carboxypeptidase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089679|ref|ZP_08338578.1| hypothetical protein HMPREF1025_02161 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|316898255|gb|EFV20301.1| serine-type D-Ala-D-Ala carboxypeptidase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405047|gb|EGG84585.1| hypothetical protein HMPREF1025_02161 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 426

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 73/345 (21%), Positives = 130/345 (37%), Gaps = 32/345 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                          L+D  TG ++     D     AS TK+MT  +           L+
Sbjct: 52  SIKVKPSDLYARSAVLMDAETGRILFGKNKDEQMPMASTTKIMTCILALEN-----GNLS 106

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               +S  AS  P       +G T  L + L  L+++S ND AVAIAE +     KF   
Sbjct: 107 DKAEVSSVASAQPKVKLGMTQGQTFYLKDLLYSLMLESHNDSAVAIAECIAGNVDKFADM 166

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  LG ++T+F+  +G+        H+TTA ++A +      + PQ   + +I   
Sbjct: 167 MNKKASQLGCNSTYFITPNGLDGQDENGIHHTTAEELARIMRYCIMESPQKEKFLEITRA 226

Query: 194 EI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           +          K     N N  +    GA   KTGFT  +G+  V +  +  ++LI  +L
Sbjct: 227 DAYTFTDCKGEKSYSCVNHNTFLKMMDGALSGKTGFTQDAGYCYVGALRKDGKTLIVALL 286

Query: 245 GALDRNT---RNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVC 297
                N    +   +  L++ G  N   ++    KI+   K + +   +   P   +++ 
Sbjct: 287 ACGWPNNKGYKWSDTKKLMTYGMENYCYKEISPDKIDRTEKIYIKNGYTGGFPKKGKDLL 346

Query: 298 TTQKEIINYNTQMKEAKDKESHF-------IDFEKITLLKNKITK 335
             +    +    +      E             +K T++   + +
Sbjct: 347 EVEILGESKKILVGADDKDEIEIKIKKEICAPIKKGTVIGEIVYR 391


>gi|184159011|ref|YP_001847350.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii ACICU]
 gi|332874790|ref|ZP_08442660.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6014059]
 gi|183210605|gb|ACC58003.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii ACICU]
 gi|322508991|gb|ADX04445.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii
           1656-2]
 gi|323518975|gb|ADX93356.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737051|gb|EGJ68008.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6014059]
          Length = 439

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 15/343 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N       +E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIASESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +     E         +   +     D  +     ++I +L
Sbjct: 301 STLKMFKVETKQPTIVTTSLYAEP-TPIDLNTFDYATQRIQVL 342


>gi|149184554|ref|ZP_01862872.1| Serine-type D-Ala-D-Ala carboxypeptidase [Erythrobacter sp. SD-21]
 gi|148831874|gb|EDL50307.1| Serine-type D-Ala-D-Ala carboxypeptidase [Erythrobacter sp. SD-21]
          Length = 388

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 16/317 (5%)

Query: 5   LVIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           LV   +A  +   P ++         E +  P   L D  +G V+ E   D  + PAS+T
Sbjct: 8   LVAFCVAATAVCVPAVAQKAERSVPPEADVAPIAFLFDLTSGQVLFEREADRRFMPASIT 67

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVK 114
           K+MT ++ F +++E K +     TI            S       + +T+D+ +  +   
Sbjct: 68  KVMTTFLAFEWMEEGKIVPAQSFTIKPEVWRAWNNVGSTMFLPHDARVTVDDLVHGVTTV 127

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-VVQHGHYTTARDMAIL 173
           SAND A A+A+    + +++V  MN+ +  +G++ +HF   +G +     + TARD+  L
Sbjct: 128 SANDGAAALADGAAGSIEEWVAAMNSKASEIGMADSHFGTPNGWMDDGRTFVTARDLTTL 187

Query: 174 SWRIKTDFPQYMHYF-QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  +    P    +F             PN +   G   GADG+KTGFT  +G+  + SA
Sbjct: 188 ATAMIRRHPTKYRHFIGQPAFTYNNITQPNHDPISGVVPGADGIKTGFTNQAGYGFLGSA 247

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +  + L+ V+  +     R++ + +L+  GF      +             ++      
Sbjct: 248 ERNGRRLVMVVAASPRARDRDRAARNLIEWGFGAFEQYRLF----APEAPVGVAEVQDGS 303

Query: 293 SEEVCTTQKEIINYNTQ 309
           + EV       I  +  
Sbjct: 304 AREVALVSPYGIYVDLP 320


>gi|312622507|ref|YP_004024120.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202974|gb|ADQ46301.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 451

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F ++    + +      +           L++ +TG ++ E   +    PAS TK++TA 
Sbjct: 19  FALLFTYPLYTYSQQESTDKLFLSAKSAILVEAHTGQILFEKNSNLTCFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L     +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----NLNKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++      FV+ MN  +K++G   +HF+N +G+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENIAGNIPAFVEKMNQYAKSIGAENSHFVNPNGLHSPQHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         + + +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 ILRKIFSTVEYRITTASMHKKPEWQIIYNINKLLRKNSKYYYPYATGIKTGYTAQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + +  LIAVIL           +  L + GF N    K  +              
Sbjct: 255 IASAKKDNIELIAVIL---SSEDAFSDAIKLFNYGFNNFKRVKLFSEHQIVGKVLIDKTN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMK-----EAKDKESHFIDFEKITLLKNK 332
              +   + T    + N  +  +          +   +   K T++ N 
Sbjct: 312 QKWLDGYLKTPVYVLQNVYSPAESDLTYTIDFLKDLKLPIYKDTVIGNV 360


>gi|222529246|ref|YP_002573128.1| serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222456093|gb|ACM60355.1| Serine-type D-Ala-D-Ala carboxypeptidase [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 451

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F ++    + +      +           L++ +TG ++ E   +    PAS TK++TA 
Sbjct: 19  FAILFTYPLYTYSQQESTDKLGLSAKSAILVEAHTGQILFEKNSNLTCFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L     +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----NLNKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++      FV+ MN  +K++G   +HF+N +G+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENISGNIPAFVEKMNQYAKSIGAENSHFVNPNGLHSPQHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         + + +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 ILRKIFSTVEYRITTASMHKKPEWQIIYNINKLLRKNSKYYYPYATGIKTGYTAQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + +  LIAVIL           +  L + GF N    K  +              
Sbjct: 255 IASAKKDNIELIAVIL---SSEDAFSDAIKLFNYGFNNFKRVKLFSEHQIVGKVLIDKTN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMK-----EAKDKESHFIDFEKITLLKNK 332
              +   + T    + N  +  +          +   +   K T++ N 
Sbjct: 312 HKWLDGYLKTPVYVLQNVYSPAESDLTYTIDFLKDLKLPIYKDTVIGNV 360


>gi|302871943|ref|YP_003840579.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574802|gb|ADL42593.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 451

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 143/349 (40%), Gaps = 27/349 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F ++    + +      +           L++ +TG ++ E  P+    PAS TK++TA 
Sbjct: 19  FAILFTYPLYTYSQQESTDKLGLSAKSAILVEAHTGQILFEKNPNLRCFPASTTKVLTAL 78

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           V  S+       L     +S  A+   P  S+     G T++  + L  +++ SAND A 
Sbjct: 79  VAISYEH----DLNKIFKVSSKATMIEPGSSSYYLNPGETISFQDLLYAMLLISANDAAN 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            IAE++  +  +FV+ MN  +K++G   +HF+N +G+    HYTTA D+++++ +   + 
Sbjct: 135 VIAENIAGSIPEFVKKMNEYAKSIGAKNSHFVNPNGLHSPEHYTTAYDLSLIARQAYQNE 194

Query: 182 P--------QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNI 228
                    +Y         + + +   N N      +   +  A G+KTG+T  +   +
Sbjct: 195 MLRKIFSTVEYRITTASMHKKPEWQIIYNINKLLRKNSKYYYPYATGIKTGYTAQAKRCL 254

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +ASA + D  LIA+IL + D       +  L + GF N    K  +              
Sbjct: 255 IASAKKDDIELIAIILFSEDA---FSDAIKLFNYGFNNFKREKLFSENQIVGKVLIDETN 311

Query: 289 VPNISEEVCTTQKEIINYNTQMK-----EAKDKESHFIDFEKITLLKNK 332
              +   +      + N  +  +          +   I   K T++ N 
Sbjct: 312 HKWLDGYLKIPVYVLQNVYSPAESNFTYTVDFSKDLKIPIYKDTVIGNV 360


>gi|255318395|ref|ZP_05359628.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter radioresistens
           SK82]
 gi|262378625|ref|ZP_06071782.1| D-Ala-D-Ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter radioresistens SH164]
 gi|255304387|gb|EET83571.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter radioresistens
           SK82]
 gi|262299910|gb|EEY87822.1| D-Ala-D-Ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter radioresistens SH164]
          Length = 437

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 14/335 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           MR F  +  +  L       +     + E+ +   +++LD  +G +IAE   +   +PAS
Sbjct: 1   MRIFAYLFILFSLCCASLANARLLQVVPESVEAAAWSILDPQSGQIIAEYNSEVQRSPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    ++  K      +T +       +  S    K+G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIENGKLNRNEILTATPVVKMVMWDESQMYLKEGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      F++ MN  ++ LG+  THF N  G+   GHY+TA D+A+L
Sbjct: 121 MSANDAAVTLAERISGNVPAFIERMNQEAQKLGMKNTHFTNPAGITMDGHYSTAHDLALL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  D P Y++Y + +        +  TN  +      DG+KTGFT A+G+N+  +A 
Sbjct: 181 GQALVNDTPDYLNYSKQQSFTYNNHFHRATNLLLKQDATVDGLKTGFTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +        ++ LI V++G      R +V+  LL++G+    D   I           + 
Sbjct: 241 RPTMNADLPNRRLIVVVMGTTSAVKRAEVAYKLLNLGYAYTRDEVAIKDKQLLGELPVVK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
           + +     +    +    +   Q      +     
Sbjct: 301 STLKMFKVKSAQPKIITTSLYNQPYAIDLQTFDNA 335


>gi|308071619|ref|YP_003873224.1| D-alanyl-D-alanine carboxypeptidase [Paenibacillus polymyxa E681]
 gi|305860898|gb|ADM72686.1| D-alanyl-D-alanine carboxypeptidase [Paenibacillus polymyxa E681]
          Length = 313

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 21/281 (7%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V+I +  ++     L            L+D +TG ++ +   D P   A+++KLMT  +V
Sbjct: 15  VLIILIFITLGPRLLIGKPNVDAEAAVLMDMHTGELLMDVNGDTPMPSANMSKLMTELLV 74

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              ++  +      + IS+ AS     N + + G  MT+    + ++V SAND AVA+AE
Sbjct: 75  LEDIRAGRLGWNDEVRISRYASTVGGVNLSLRYGERMTVSELFQSMVVYSANDAAVALAE 134

Query: 126 SLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGV------VQH------GHYTTARDMAI 172
                E  FV+ MN  +  +G  S + F NA G         H          TA D A 
Sbjct: 135 RSAGNESAFVKRMNGKAAQIGLSSDSRFSNASGAGQSELGPNHPEDIQGETKMTASDTAK 194

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV--------GTFLGADGMKTGFTCAS 224
           L+  + T  P+ +       +E+K K    +N            ++ G DG+K G+T  +
Sbjct: 195 LASYLITSHPEILRTSSRTQMELKDKGIYISNTNWMLPSLAGPYSYAGTDGLKAGYTSDA 254

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           G+    +A Q  + L+AV+LGA  +  R + +  L   GF 
Sbjct: 255 GYCFTGTAEQHGRRLVAVVLGAPSKEERFEQTRRLFDYGFS 295


>gi|42781103|ref|NP_978350.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
 gi|217959457|ref|YP_002338009.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|229138682|ref|ZP_04267264.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-ST26]
 gi|42737024|gb|AAS40958.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
 gi|217066480|gb|ACJ80730.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|228644801|gb|EEL01051.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-ST26]
 gi|324326015|gb|ADY21275.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 317

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 130/265 (49%), Gaps = 12/265 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++  + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +  
Sbjct: 49  LVEKVVPPKYIPPEIDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHN 108

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K     P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+E
Sbjct: 109 GKVRWEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSE 168

Query: 132 KKFVQHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           K FVQ MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +  
Sbjct: 169 KDFVQLMNAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVANLAYHLIKDYPEILEV 228

Query: 188 FQIKGLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             ++  ++              N N       G DG+KTGFT ++G+    +A QGD  +
Sbjct: 229 THLRQSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRI 288

Query: 240 IAVILGALDRNTRNKVSASLLSMGF 264
           I V++G   +  R   +  L+S  F
Sbjct: 289 ITVVMGTKGKTKRFTETNKLMSYAF 313


>gi|222095601|ref|YP_002529658.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|221239659|gb|ACM12369.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
          Length = 317

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 130/265 (49%), Gaps = 12/265 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++  + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +  
Sbjct: 49  LVEKVVPPKYIPPEIDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHN 108

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K     P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+E
Sbjct: 109 GKVRWEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSE 168

Query: 132 KKFVQHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           K FVQ MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +  
Sbjct: 169 KDFVQLMNAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVANLAYHLIKDYPEILEV 228

Query: 188 FQIKGLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             ++  ++              N N       G DG+KTGFT ++G+    +A QGD  +
Sbjct: 229 THLRQSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRI 288

Query: 240 IAVILGALDRNTRNKVSASLLSMGF 264
           I V++G   +  R   +  L+S  F
Sbjct: 289 ITVVMGTKGKTKRFTETNKLMSYAF 313


>gi|299820880|ref|ZP_07052769.1| serine-type D-Ala-D-Ala carboxypeptidase [Listeria grayi DSM 20601]
 gi|299817901|gb|EFI85136.1| serine-type D-Ala-D-Ala carboxypeptidase [Listeria grayi DSM 20601]
          Length = 441

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 81/366 (22%), Positives = 133/366 (36%), Gaps = 43/366 (11%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I+   L       +            ++ +TG V+ E  PD     AS+TK++  Y++  
Sbjct: 21  ISTFSLVPNDAQAATTPNVNAKAAFTIEESTGKVLYEKNPDQLLGIASMTKMLDEYILLE 80

Query: 68  FLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
            + + K   T  + IS  A     +   SN   + G   T+    + + + SAN  A+A+
Sbjct: 81  KIDQGKLKWTDKVKISGYAHEVSQDTSLSNVPLRNGEFYTVKELYQAMAIYSANGAAIAL 140

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-------------HYTTARDM 170
           AE +  +EK FV  MN  + +L L    F+N  G+                 +  TAR M
Sbjct: 141 AEKIAGSEKAFVGLMNEKANSLKLGKHKFVNVTGLNNSDLKGKQQIGGKNSENKMTARGM 200

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA----VGTFLGADGMKTGFT 221
           A L+  +   +P  +       L  +          N NW     +    G DG+KTG T
Sbjct: 201 AKLAKSLIDTYPDVLKTASTTKLAFRKGTSDQINMSNWNWLLPGLIYGRKGVDGLKTGTT 260

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRN-------TRNKVSASLLSMGFYNKTDRKKIN 274
             +G  + A+A Q    +I VIL A   N       TR K +  +L   F N   ++   
Sbjct: 261 DYAGMCLTATAKQDGMRVITVILHANGGNSSDQHDGTRFKETNKMLDYAFDNFKVKQVAK 320

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES---------HFIDFEK 325
              +   +    +      + V     + +N      +A  K S              +K
Sbjct: 321 AG-QAVKKPASISVKDGKEDSVKLETNKNVNLVVPKDQANPKLSENVKLVSKEITAPVKK 379

Query: 326 ITLLKN 331
              L  
Sbjct: 380 DQKLGT 385


>gi|302385725|ref|YP_003821547.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
 gi|302196353|gb|ADL03924.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
          Length = 439

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 128/343 (37%), Gaps = 37/343 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D +TG ++     D     AS TK+MT  +   +       L+  +T S+
Sbjct: 56  NLYAQSAVLMDASTGRILYGKNEDIARPMASTTKIMTCILALEY-----GNLSDTVTASQ 110

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NAS  P  +    KG T  L + L  L+++S ND A+ IAE +  +++ F   MN  +++
Sbjct: 111 NASSQPKVHLGVYKGETFLLKDLLYSLMLESHNDAAMMIAEHIGGSQEGFAGLMNQKARD 170

Query: 145 LGLSATHFMNAHGVVQH--------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI- 195
           LG + T+F+  +G+            H TTA D+A +        P+   + +I G +  
Sbjct: 171 LGCTDTYFITPNGLDAREEKDGQVKEHSTTAADLARIMNYCIGQSPKKKEFLEITGTKSY 230

Query: 196 --------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA- 246
                   +     N N  +    GA   KTGFT  +G++ V +A    +     +LG  
Sbjct: 231 SFTDLEGKRSYSCNNHNTLLAMMNGAFSGKTGFTGGAGYSYVGAAQDNGRIYTIALLGCG 290

Query: 247 --LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD-------FYQQNLSNEVPNISEEVC 297
               +  +   +  L   G      R     +                 +E   +S  + 
Sbjct: 291 WPPHKAYKWSDARKLFQYGMERFHYRNVYKDLSLPDIPVKEGIPASGRLDEPVTVSCIIG 350

Query: 298 TTQKEIINY-----NTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +++ +            + +  +       K   + N I +
Sbjct: 351 GEEEKDLTLLLADEEEVTVQTEIPKELIAPVRKGQAVGNVIYR 393


>gi|210623818|ref|ZP_03294067.1| hypothetical protein CLOHIR_02018 [Clostridium hiranonis DSM 13275]
 gi|210153313|gb|EEA84319.1| hypothetical protein CLOHIR_02018 [Clostridium hiranonis DSM 13275]
          Length = 453

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 82/369 (22%), Positives = 142/369 (38%), Gaps = 40/369 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE--------TNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++   ++   +L     F SI            +     L+D  TG V+ +   +    
Sbjct: 1   MKKISSVLIAFLLVFASVFTSIGSVFADQKVVNLEAKSAVLMDYETGKVLYQKNGNVKIY 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK  TAY+V   +      L   ITI  N     PS+   KKG T T+   L  L+
Sbjct: 61  PASTTKAWTAYLVIKHVP----DLNEKITIG-NLPYIEPSSMFLKKGETFTVKELLTALM 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V S ND+A  +AE +  +  KF   MN  ++ +G + THF N +G+    HYTTA+DMA+
Sbjct: 116 VHSCNDVAYVLAEHVSGSIPKFADLMNKEAEAIGCTGTHFNNPNGLPDPNHYTTAKDMAL 175

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT---------------------FL 211
           ++ +  +D   +      K ++ K  K                               + 
Sbjct: 176 IARKCMSD-SVFREIVATKSVKFKPTKQYPHERVYTNSNKFLTSHQKITYKGKRIDIKYD 234

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
             DG+KTGFT A+G  ++ SA++ +Q +I+ +  +   +     S +L+   F N     
Sbjct: 235 IVDGIKTGFTNAAGKCLLTSAVKDNQRIISAVFNS-TNDGIYVDSRTLIDYVFENYDSFT 293

Query: 272 KINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
            ++       ++   +    +     E       +      +     D +   +      
Sbjct: 294 IMDKADYVDTKRKWFSTQKKLMYQPKESYSVVLPKGQTVTDEFTFKTDLQDTSLPISAGD 353

Query: 328 LLKNKITKK 336
            +      K
Sbjct: 354 KIGEFYIYK 362


>gi|312865485|ref|ZP_07725712.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus downei
           F0415]
 gi|311099003|gb|EFQ57220.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus downei
           F0415]
          Length = 411

 Score =  152 bits (382), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 135/366 (36%), Gaps = 33/366 (9%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++F +  ++A ++L       +        +   ++  TG ++ E     P   AS+TK
Sbjct: 1   MKKFFISLLMAFSLLFTASLAKADDFDAPAKHAIAVEATTGKILYEKDASTPDGVASMTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++T Y+V+  + E K    + + IS  A +   ++               +L+       
Sbjct: 61  ILTVYMVYKAIDEGKLSWNSKVKISDYAYDLTTNSEASNVPMDAREYTVKELVNAALIAS 120

Query: 119 IAVAIAESLCK---TEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QH 161
              A      K    E  FV  M    K  G+     +NA G+                 
Sbjct: 121 ANSAAIALAEKLGGDEATFVDMMQAQLKQWGIKDAKLVNASGLNNSYLGDHIYPGSKSDD 180

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMK 217
            +  +A+DMAI++  + +D+P  +   +    +         N  +        G DG+K
Sbjct: 181 ENLMSAKDMAIIARHLISDYPDVLDITKKTSEKFGNTDMATFNMMLDGMPYAREGVDGLK 240

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G + VA++ +    +I+V++ A + +     R + +  +L+   YN      +
Sbjct: 241 TGTTELAGQSFVATSTENGMRVISVVMHADNADNNQYARFEATNKILNYVTYNFQLTNLV 300

Query: 274 NYII-----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                    K       S  VP +++E      +I + +    +   KE      +K + 
Sbjct: 301 VKGESYKSSKASVIDGKSKTVPAVAKEDFQVVTKIGSDHKPSGKVSTKE-VTAAVKKGSQ 359

Query: 329 LKNKIT 334
           + +   
Sbjct: 360 VGSLTY 365


>gi|228985080|ref|ZP_04145247.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774567|gb|EEM22966.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 317

 Score =  152 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAMIIDASNGDIIYQQNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKGFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTKGKTKRFTETNKLMSYAF 313


>gi|293609789|ref|ZP_06692091.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828241|gb|EFF86604.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 439

 Score =  152 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 14/314 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K      IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKKEEIITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +     +FVQ MN  ++ LG+  THF N  G+    H+TTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPRFVQRMNQEAQALGMKDTHFSNPAGITMPDHFTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIKQTPEYLHYSKMPNFSYNQRFHHATNLALKYDPYVDGLKTGYTKAAGYNLALTAS 240

Query: 234 QG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSSDLTQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVIIPEQKLIAELPVVK 300

Query: 287 NEVPNISEEVCTTQ 300
           + +     E     
Sbjct: 301 STLKMFKVETKQPT 314


>gi|262372029|ref|ZP_06065308.1| penicillin-binding protein 6B [Acinetobacter junii SH205]
 gi|262312054|gb|EEY93139.1| penicillin-binding protein 6B [Acinetobacter junii SH205]
          Length = 439

 Score =  152 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 14/289 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+  L +     L  +    +       ET +   ++++D  +G +IAE+       PAS
Sbjct: 1   MKFILSLFTFFSLLCVNLAHANLLKIAPETVEAQAWSIVDAQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    ++  K      +T +   N   +  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIEAGKLRKEDILTATPVVNTVMWDESQMYLKTGEKISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +  +  +FV  MN  ++ LG+  THF N  G+    HY+TA D+ +L
Sbjct: 121 MSANDAAVTLAEKISGSVPQFVARMNQEAQALGMKDTHFSNPAGITMPDHYSTAADLGLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I  D P+Y++Y ++       + +  TN A+     ADG+KTG+T A+G+N+  +A 
Sbjct: 181 AKAIVQDTPEYLYYSKMPSFSYNQRVHHATNLALKMDPTADGLKTGYTKAAGYNLALTAE 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +         + LI ++LG      R +V+  L+++ F    D   I  
Sbjct: 241 RPTFNPDVEKRRLIVIVLGTPSAVKRAEVAHKLMNLAFTYTRDEVVIPK 289


>gi|251782267|ref|YP_002996569.1| carboxypeptidase, penicillin-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390896|dbj|BAH81355.1| carboxypeptidase, penicillin-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 411

 Score =  152 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 148/378 (39%), Gaps = 42/378 (11%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++  ++  + +  +      L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 2   IKRLAILFFVVLACSGLGKTVLAADFQVGAEHAIVVEVDSGRVLYEKDAKTPDAIASLTK 61

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +   +  L+  + +S  A         ++      T ++ + L+  +V S
Sbjct: 62  LVTAYLVLDKVNSGQLQLSDQVNLSDYAFELTTDSSLSNVPFDQKTYSVQDLLEATLVAS 121

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M       G+++    NA G+                 
Sbjct: 122 SNSAAIALAEKVAGSEPNFVAQMRAQLSRWGITSGKIFNASGLPNEVLKDHRYPGSALEE 181

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+K
Sbjct: 182 ENMLSAQDVAIVTMHLLEDFPEILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLK 241

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    LI VIL A       NTR + +  LL         RK +
Sbjct: 242 TGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANHLLDYVAKRYHRRKIL 301

Query: 274 NYI----IKDFYQQNLSNEV--PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                   + F   N + +      +++V              +     +S  +   K  
Sbjct: 302 KKGSLMTERPFSVVNGTAQTLSTYAAKDVTLVLGTDELAPRPEQFVVSTDSLLVPIAKGE 361

Query: 328 LL---------KNKITKK 336
           ++           +  KK
Sbjct: 362 VVAYLTSPRIAGERYLKK 379


>gi|319744055|gb|EFV96432.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus agalactiae
           ATCC 13813]
          Length = 411

 Score =  152 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/363 (19%), Positives = 143/363 (39%), Gaps = 33/363 (9%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +  I+ ++ +  +    + +      +   +D ++G ++ E   + P   ASLTKL
Sbjct: 1   MKKIITSILLLSCIFFMPTISAESFNASAKHALAVDLDSGKILYEKDANKPAAIASLTKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MT Y+V+  +        T + IS    +      +++   +    T+   +   ++ SA
Sbjct: 61  MTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRESDASNVPLEKRRYTVKQLVDAAMISSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HG 162
           N  A+A+AE +  TE KFV  M    +  G+  +H +NA G+                  
Sbjct: 121 NSAAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +ARD+AI+++ +  ++P  +        +       + N+ +        G  G+KT
Sbjct: 181 NKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + +A++ +    L+ VI+ A     D+  R   + SLL+           + 
Sbjct: 241 GTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLA 300

Query: 275 YIIKDFYQ------QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                  +          + +     ++   QK+ I    Q+K    KE       K   
Sbjct: 301 KGAAYKGKEVSVRDGKEQSVIAVAKNDLKVAQKKNITKQNQLKINFKKE-LTAPITKKEN 359

Query: 329 LKN 331
           L  
Sbjct: 360 LGK 362


>gi|118443151|ref|YP_878109.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
 gi|118133607|gb|ABK60651.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
          Length = 375

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 134/346 (38%), Gaps = 26/346 (7%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDH 49
           M++      ++ I +       P +   E               +D+ +  V+ E   + 
Sbjct: 1   MKKLRTISIILNICLIFNIAFVPSIEATEPKNNSIYVDARCAIAMDSKSKCVLYEKNAEM 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS TK+MT  V   +       L T   +S  A+    S   +KKG  ++L   L 
Sbjct: 61  LVPIASTTKIMTTLVALKY-----GNLDTKYEVSPKAASIRGSKVGYKKGEQISLKELLY 115

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+++S ND A+ IAE +  + +KF + MN  +  +G   +HF + HG+    HY+TA D
Sbjct: 116 GLMLRSGNDAAITIAEGISGSVEKFCELMNEYAIEIGAFNSHFESPHGLDSQNHYSTAYD 175

Query: 170 MAILSW----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +A ++         +    +     K      + Y N N  +     A+G+KTG+T  +G
Sbjct: 176 LARITAKAKENKLFNEIVGVKDIDEKQHGF-TRSYHNINKILYQIPNANGVKTGYTGGAG 234

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQ 283
             +V S  + D  +I V+L       R K +  +      N   +K ++   ++ +    
Sbjct: 235 KCLVTSVKEDDDDVIIVVLNCT---PRWKETKKIYDFVKENYDFKKLVSKDQVLDNIEDN 291

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +      + ++     +      ++ +     S       +  +
Sbjct: 292 KGNKVKLVCNNDLVIPVGKQEKCEYKIIKPTKLPSRVYKGINLGKI 337


>gi|239501103|ref|ZP_04660413.1| Penicillin-binding protein 6B precursor [Acinetobacter baumannii
           AB900]
          Length = 439

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 15/343 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           S  +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLTYAYTRDEVVIPEQKLIAELPVIK 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           + +     E         +   +     D  +     ++I +L
Sbjct: 301 STLKMFKVETKQPTIVTTSLYAEP-TPIDLNTFDYATQRIQVL 342


>gi|322392110|ref|ZP_08065572.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus peroris
           ATCC 700780]
 gi|321145010|gb|EFX40409.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus peroris
           ATCC 700780]
          Length = 413

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 140/353 (39%), Gaps = 31/353 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            ++     +        +   ++  TG ++ E     P   AS++KL+T Y+V+  L + 
Sbjct: 14  CASTTTVFAQDFNVPAKHAIAVEATTGKILYEKDATQPVEIASISKLLTVYLVYEALDQG 73

Query: 73  KAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K  L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+AE +  
Sbjct: 74  KITLSTPVEISDYPYKLTTNSEASNVPMEARNYTVEELLEATLVSSANSAAIALAEKIAG 133

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSW 175
           +EK FV  M       G+     +N+ G+                  +  +A D+A+++ 
Sbjct: 134 SEKDFVDMMKAKLLEWGIQDATLVNSTGLNNETLGNNIYPGSKKDDENKLSAYDVAVVAR 193

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVAS 231
            +   +PQ +   +       G    +TN+ +        G DG+KTG T  +G + V +
Sbjct: 194 NLILKYPQVLEITKKPSSTFAGMTIHSTNYMLEGLPAYRGGVDGLKTGTTDKAGASFVGT 253

Query: 232 AIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKKINYI------IKDFY 281
            ++    +I V+L A ++NT    R   +++LL     N   +  +N             
Sbjct: 254 TVEKGMRIITVVLNADNQNTNPYARFTATSALLDYISSNFALQTIVNQGESYQDSKSPVL 313

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
               +       E++   Q+      + +    D   H    E  T++ +   
Sbjct: 314 DGKQNTVAAVAKEDIKIVQRLGSRAQSSVTYTADTTEHTAPLEAGTVVGHLTY 366


>gi|253579895|ref|ZP_04857163.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848894|gb|EES76856.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 459

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/331 (20%), Positives = 132/331 (39%), Gaps = 13/331 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +++ +N                 L+D ++G ++     D    PAS+TK+MT  +     
Sbjct: 68  VSISTNEISGWPAGPEITSETGVLMDADSGTLLYSKGGDEIRYPASITKIMTLLLAVENC 127

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             K+ ++ T          +   N   + G  M++   L  L+++SAN++A  IAE +  
Sbjct: 128 SLKEDVVFTETGT--RDISWDSGNIGMQVGEVMSMRACLYALVIRSANEVAAQIAEHVGG 185

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---- 185
           TE+ FV  MN  +  +G + THF+NA G+    HY+TA DMA++      +         
Sbjct: 186 TEQHFVDMMNERAAQIGCTNTHFVNASGLPDPDHYSTAHDMALIMREGLKNKKFRRIIGA 245

Query: 186 --HYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
             +  +   +  + +     +          + G  G KTG+T  +G  +V +A +   +
Sbjct: 246 TDYTIKPTNMNSEPRVLHTHHPMLAPESSYHYDGCIGGKTGYTSEAGNTLVTAAGKNGTT 305

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
            I V + A D    +  S +L + G+ N T  +     +       + N     + +   
Sbjct: 306 YITVTMKAADLAVASTDSTALFNYGYQNFTKAQVNGGEVSVPNGVTVDNLTVQENSQNGN 365

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           T  +    +  +   +  E+       +  L
Sbjct: 366 TVDDYYYNDYLLGSVEVPEATPTPEPAVDAL 396


>gi|331084355|ref|ZP_08333459.1| hypothetical protein HMPREF0992_02383 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330401619|gb|EGG81200.1| hypothetical protein HMPREF0992_02383 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 417

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/274 (21%), Positives = 112/274 (40%), Gaps = 12/274 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                A         L++ ++G V+ +   +    PAS TK+MTA ++   + +    +T
Sbjct: 34  SGWPSAPEISSASGVLMEASSGQVLFDKSMNEIRYPASTTKVMTALIILENIPDLNKNIT 93

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               I  + +    S    + G  +T++  L  +++ SAN++   +A  +  + + F   
Sbjct: 94  FTDIILPDLAPGN-STINAQVGEVLTVEQCLYAIMLASANEVCTQMAVEVAGSVENFTAM 152

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ------YMHYFQIK 191
           MN  +  +G + THF+NA+G+    HYTTA D+A++      +           +     
Sbjct: 153 MNAKAAEIGCTNTHFVNANGLPDPNHYTTAYDLALILREAVKNEAFCKIAGAAKYTIPPT 212

Query: 192 GLEIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                 +   N N         + GA   KTG T A+   +V +A + D +LI V+L + 
Sbjct: 213 NKTAASRNMENHNALLVDGKYYYEGAIAGKTGHTEAARNTLVTAASREDMTLICVVLRSE 272

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
           +   R   + +L   GF N   +           
Sbjct: 273 NDE-RFTDTKTLFDYGFDNFHSQSLYWMDKTTPV 305


>gi|291522282|emb|CBK80575.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus catus GD/7]
          Length = 383

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/350 (18%), Positives = 127/350 (36%), Gaps = 30/350 (8%)

Query: 8   IAMAMLSNIFPFLSIAET----------NKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           I   +   I    + AET                 L+D ++G ++        +  AS T
Sbjct: 6   IFCTLFILIQNPAAAAETGQQEEKEKLSLNARAAVLMDADSGRILYGKNETMAFPMASTT 65

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  V     +         +  S  AS  P       +G    +++    ++++S N
Sbjct: 66  KIMTLIVALEHNE-----PDQIVMASAGASAMPEVRLGVHEGERYRMEDLYYAMMLESFN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAIL 173
           D A+ IAE    + + F + MN  + +LG + T+F+  +G+        H +TA DMA +
Sbjct: 121 DAAMMIAEGTVGSVENFAELMNEKAISLGCTQTYFITPNGLDAADEKGVHSSTAEDMAKI 180

Query: 174 SWRIKTD-----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
                 +       Q   Y        +  +  N N  +    G    KTG+T  +G+  
Sbjct: 181 MRYAIDNEDFLKITQTADYSFTDCDRKRSFEVHNKNVLLTMMDGVLSGKTGYTADAGYCY 240

Query: 229 VASAIQGDQSLIAVILGALDRNT---RNKVSASLLSMGFYNKTDRKK-INYIIKDFYQQN 284
           V +  + D++ IA +LG+        +     +LL  G  N   +   I+  + D     
Sbjct: 241 VCAVKKDDRTFIAALLGSGWPPHKGYKWLDVQTLLDYGDKNYRYQTIDISKGVPDRQVHV 300

Query: 285 LSNEV--PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++ E     +  +    +  + + +    E+          E    + + 
Sbjct: 301 MNGEQDFATVRAKQTNYRFLLSSEDKVHVESVLPGQLEAPVEAGQPVGSI 350


>gi|77411808|ref|ZP_00788143.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae CJB111]
 gi|77162143|gb|EAO73119.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae CJB111]
          Length = 411

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 146/362 (40%), Gaps = 31/362 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +  I+ ++ +  +    + +      +   +D ++G ++ E   + P   ASLTK+
Sbjct: 1   MKKIITSILLLSCIFFMPTISAESFNASAKHALAVDLDSGKILYEKDANKPAAIASLTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MT Y+V+  +        T + IS    +      +++   +    T+   +   ++ SA
Sbjct: 61  MTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRESDASNVPLEKRRYTVKQLVDAAMISSA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  TE KFV  M    +  G+  +H +NA G+                  
Sbjct: 121 NSAAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMKT 218
           +  +ARD+AI+++ +  ++P  +        +       + N+ +        G  G+KT
Sbjct: 181 NKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + +A++ +    L+ VI+ A     D+  R   + SLL+           + 
Sbjct: 241 GTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLA 300

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                   +     V +  E+      +      Q +    +    I+F+K   L   IT
Sbjct: 301 KGAA---YKGKEASVRDGKEQSVIAVAKNDLKVVQKRNITKQNQLKINFKK--ELTAPIT 355

Query: 335 KK 336
           KK
Sbjct: 356 KK 357


>gi|328944931|gb|EGG39089.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1087]
          Length = 422

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 131/375 (34%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAIAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +       + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYTLTSNPNISNVPLEAKRYKAKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                  S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGETYNKSNSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|168335230|ref|ZP_02693333.1| Serine-type D-Ala-D-Ala carboxypeptidase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 377

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 21/339 (6%)

Query: 1   MRQFLVIIAMAMLSNI-FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +  +A+ ++     P  +   T       L++  +  V+     +     AS TK+
Sbjct: 1   MKRGITAVAIIVVCLSNMPVEAKIGTLGGKGVVLVEPESMRVLYGINENTQLPMASTTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA +           L   +T+S NA++ PP +   K+     L + L  L+++S ND 
Sbjct: 61  MTAIIALEN-----GNLEDVVTVSANAAKAPPVDLKLKENEKQYLGDLLYSLMLQSHNDT 115

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVAIAE +  + ++F + M   +  LG   T F   +G+    HY+T  D+A++      
Sbjct: 116 AVAIAEHIGGSVEEFCEMMTTKANELGAVNTKFETPNGLDSEQHYSTPYDLALIGAYALK 175

Query: 180 DFPQ-------YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           +          YM+    +       +  N N  +    GA+G+KTGFT  +G+  V SA
Sbjct: 176 NPKFVEIINTPYMNIPTRELEGAGKHQLQNKNGFLHRMPGANGIKTGFTSKAGYCFVGSA 235

Query: 233 IQGDQSLIAVIL---GALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNL 285
            +G+ +LI V L   G+  +  +     +++  GF N      ++               
Sbjct: 236 TKGNMTLIGVSLGNFGSAGKERKYTDVKTMIEHGFNNYKMYTLVDKEQILDNIAIKNGKE 295

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
                   E V             +   K  E      E
Sbjct: 296 EEVKLVAKERVSIPLTADEMEKVTLSITKPDEVD-APVE 333


>gi|229917441|ref|YP_002886087.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Exiguobacterium sp. AT1b]
 gi|229468870|gb|ACQ70642.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Exiguobacterium sp. AT1b]
          Length = 415

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/354 (20%), Positives = 140/354 (39%), Gaps = 20/354 (5%)

Query: 1   MR-----QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+       L ++ +          + A         L+D  TG V+     D    PAS
Sbjct: 1   MKARYFIILLTVVFVIQTMLPSAASAAAPKVDAASAMLVDVTTGQVLFAKQEDSMLQPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLI 112
           +TKLMTA++    ++  K   T  IT S  A   +  P            T+       +
Sbjct: 61  ITKLMTAFLTREAIEAGKLSWTQEITPSDAALALTRKPGLARIPLLNKPYTVKELYDAAL 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH------GHYTT 166
           ++SAN+ AV + E++  +E+ FV+ MN  +  LG++ T F NA G+          + T+
Sbjct: 121 IRSANEAAVTLGEAVSGSEEAFVKEMNRRADELGMTQTTFANASGLDSESAGLPGDNLTS 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT----FLGADGMKTGFTC 222
           A+D+  L+    T +P+ +   +   +++ G ++  TN  +      + G  G KTG T 
Sbjct: 181 AKDLMKLAIAYLTTYPEVLDVTKRAYVDVDGVRFDATNRMLANRDLAYPGMLGFKTGTTN 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G+  +  + +  +++++V+LGA     R   + +L    + +      +         
Sbjct: 241 EAGYCFIGVSTRDGRTVLSVVLGATSDEGRYAATKALHDYAYADFVMTPILRMGETISKM 300

Query: 283 QNLS-NEVPNISEEVCTTQKEIINYNTQMKEAK-DKESHFIDFEKITLLKNKIT 334
             +S  E   ++       + ++     + E + D        +  T       
Sbjct: 301 ATVSQGEEEQVAVRTTNDFEVLVEKGRPVPEPEYDLLDLEAPIKADTQAGMVTI 354


>gi|47568352|ref|ZP_00239054.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
 gi|47555045|gb|EAL13394.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
          Length = 317

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAMIIDASNGDVIYQQNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQESDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTKGKTKRFTETNKLMSYAF 313


>gi|327472301|gb|EGF17732.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK408]
          Length = 422

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 134/375 (35%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G++    +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKIKEWGITDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-- 211
                    +  +A D+A++S  +  DFPQ          +I G    N N+ +      
Sbjct: 181 TAKKSKDTENKFSAYDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQPNF 240

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLNVDQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                  S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSKSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|332365487|gb|EGJ43247.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1059]
          Length = 422

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 131/375 (34%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FV+ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVEMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                   ++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSKSTVIDGKQKTVPAVARKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|229160966|ref|ZP_04288955.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus R309803]
 gi|228622534|gb|EEK79371.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus R309803]
          Length = 317

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 12/259 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P   I          ++D + G VI +N  +  + PAS++K+MTAY++   +   K    
Sbjct: 55  PPKYIPPEINAKAAIVIDASDGDVIYQNNENEAFAPASMSKMMTAYLLLESVHNGKVRWE 114

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FVQ 
Sbjct: 115 DPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKDFVQL 174

Query: 138 MNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++  
Sbjct: 175 MNAKAKQLEMSEYAKFANASGLQEPDGSETKMTAADVAKLAYNLIKDYPEILEVTHLRQS 234

Query: 194 E--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
           +            +  N N       G DG+KTGFT ++G+    +A QGD  +I V++G
Sbjct: 235 QLAFNNTTVTNTNEMLNENNKSLHIEGMDGLKTGFTDSAGYCFTGTAKQGDTRIITVVMG 294

Query: 246 ALDRNTRNKVSASLLSMGF 264
              +  R   +  L++ GF
Sbjct: 295 TSGKAKRFTETNKLMTYGF 313


>gi|251796370|ref|YP_003011101.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. JDR-2]
 gi|247543996|gb|ACT01015.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           sp. JDR-2]
          Length = 393

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 80/293 (27%), Positives = 123/293 (41%), Gaps = 19/293 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +R+  + +  A L     F +                 L+D  +G ++     D     A
Sbjct: 6   LRRIGIALWAASLIWGTSFTASVYAAPNPYHTSANGSALVDVKSGRILYSENGDQSMRIA 65

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK+MTA V     K     L+  +  S  A     S+   + G  MTL N L  L+++
Sbjct: 66  SLTKIMTAIVAIEHGK-----LSERVKTSSRAVGKEGSSIYLQLGEEMTLLNMLYGLMLR 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND A AIAE +  +E+ FV  MN  ++ LGL+ T F N HG+   GHY++A D+A L+
Sbjct: 121 SGNDAATAIAEHVGGSEEGFVHLMNEKAEMLGLTHTQFKNPHGLDVEGHYSSANDLAKLT 180

Query: 175 WRIKTDF----PQYMHYFQIKGLEIKG-KKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +             +     K    + N N  +  + GADG+KTG+T  +   +V
Sbjct: 181 AYALRNPVFAEIVSTKVKSVPNPHEKWQYSWTNKNKMLAMYEGADGVKTGYTKKALRCLV 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           +SA +  Q L AV L   D          +L  GF +    +  +        
Sbjct: 241 SSATRDGQQLAAVTLNDRDD---WVDHRQMLDWGFKHYPLMEVASKGQTIAGY 290


>gi|323127166|gb|ADX24463.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus dysgalactiae subsp. equisimilis ATCC
           12394]
          Length = 415

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 149/378 (39%), Gaps = 42/378 (11%)

Query: 1   MRQFLVIIAMAMLSNIF--PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++  ++  + +  +      L+        +  +++ ++G V+ E     P   ASLTK
Sbjct: 6   IKRLAILFFVVLACSGLGKTVLAADFQVGAEHAIVVEVDSGRVLYEKDAKTPDAIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           L+TAY+V   +   +  L+  + +S  A         ++      T ++ + L+  +V S
Sbjct: 66  LVTAYLVLDKVNSGQLQLSDQVNLSDYAFELTTDSSLSNVPFDQKTYSVQDLLEATLVAS 125

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------H 161
           +N  A+A+AE +  +E  FV  M       G+++   +NA G+                 
Sbjct: 126 SNSAAIALAEKVAGSEPNFVAQMRAQLSRWGITSGKILNASGLPNEVLKDHRYPGSALEE 185

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMK 217
            +  +A+D+AI++  +  DFP+ +   +   ++  G    + N  +        G DG+K
Sbjct: 186 ENMLSAQDVAIVTMHLLEDFPEILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLK 245

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKI 273
           TG T  +G  +V ++I+    LI VIL A       NTR + +  LL         RK +
Sbjct: 246 TGTTDLAGHCLVVTSIENGMRLITVILNADGSDKNQNTRFEQANHLLDYVAKRYHRRKIL 305

Query: 274 NYI----IKDFYQQNLSNEV--PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                   + F   N + +      +++V              +     +S  +   K  
Sbjct: 306 KKGSLMTERPFSVVNGTAQTLSTYAAKDVTLVLGTDELAPRPEQFVVSTDSLLVPIAKGE 365

Query: 328 LL---------KNKITKK 336
           ++           +  KK
Sbjct: 366 VVAYLTSPRIAGERYLKK 383


>gi|301053509|ref|YP_003791720.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis CI]
 gi|300375678|gb|ADK04582.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 317

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEVDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNEALYIEGIDGLKTGFTDSAGYCFTGTAKQGDIRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L++  F
Sbjct: 293 MGTKGKTKRFTETNKLMTYAF 313


>gi|229150211|ref|ZP_04278433.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus m1550]
 gi|228633330|gb|EEK89937.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus m1550]
          Length = 317

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNAAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGIDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|229121111|ref|ZP_04250348.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|229183764|ref|ZP_04310981.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228599613|gb|EEK57216.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228662230|gb|EEL17833.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
          Length = 357

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 121/308 (39%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++ ++G V+       P   AS+TK+MTA +     K K       + +S 
Sbjct: 12  NVSARNAVLMEQHSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----ERVLVSN 66

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAE++  + + FV  MN  +K 
Sbjct: 67  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVGGSIEGFVYLMNEKAKQ 126

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 127 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTRYAMGN-ETFKKIFGTKTYKSDSWDYPWK 185

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 186 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 242

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    +  +K   DK +  
Sbjct: 243 DKGFDRFEQTKVLGQGALAEITEKKYANHVYTKNSFSVPLTEEEKKSVVLKVELDKSAKL 302

Query: 321 IDFEKITL 328
           +D  K+  
Sbjct: 303 VDGVKVGK 310


>gi|270292858|ref|ZP_06199069.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. M143]
 gi|270278837|gb|EFA24683.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. M143]
          Length = 414

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 137/354 (38%), Gaps = 31/354 (8%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
             + I    +        +   ++  TG ++ E   + P   AS+TK++T Y+V+  L++
Sbjct: 14  FGTAIPTVSAQDFDVAAKHAIAVEATTGKILYEKDANQPVEIASITKILTVYLVYEALEQ 73

Query: 72  KKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
               L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+AE + 
Sbjct: 74  GTISLSTPVDISDYPYQLTTNSEASNVPMEARKYTVEQLLEATLVSSANSAAIALAEKIA 133

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILS 174
            +EK FV  M       G+     +N  G+                  +  +A D+AI++
Sbjct: 134 GSEKDFVDKMRAKLLEWGIKDATIVNTTGLNNETLGNNIYPGSKKDEENKLSAYDVAIIA 193

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVA 230
             +  D+PQ +   +       G +  +TN+ +        G DG+KTG T  +G + V 
Sbjct: 194 RNLIRDYPQVLEITKKSSSTFAGMEIHSTNYMLEGMPAYRGGVDGLKTGTTDKAGASFVG 253

Query: 231 SAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYI------IKDF 280
           +  +    +I V+L A     +   R   ++SLL     N   +  +             
Sbjct: 254 TTTEKGMRIITVVLNADQQNSNPYARFTATSSLLDYITSNYALKTIVQKGEAYKDSKVSV 313

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                         +V   Q+     ++ ++     ++     E  T++ +   
Sbjct: 314 LDGKEDTVTAVAKSDVTVIQRLGSRASSSLQFTPKTKAETAPLEAETVVGHLTY 367


>gi|228933281|ref|ZP_04096137.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228826442|gb|EEM72219.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEVDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L++  F
Sbjct: 293 MGTEGKTKRFTETNKLMTYAF 313


>gi|49481177|ref|YP_036116.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332733|gb|AAT63379.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEVDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G  D+  R   +  L++  F
Sbjct: 293 MGTEDKTKRFTETNKLMTYAF 313


>gi|229090965|ref|ZP_04222189.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-42]
 gi|228692366|gb|EEL46101.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-42]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEVDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QG+  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGNTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L++  F
Sbjct: 293 MGTKGKTKRFTETNKLMTYAF 313


>gi|52143467|ref|YP_083362.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|118477407|ref|YP_894558.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|196036868|ref|ZP_03104255.1| beta-lactamase [Bacillus cereus W]
 gi|196041913|ref|ZP_03109201.1| beta-lactamase [Bacillus cereus NVH0597-99]
 gi|196047003|ref|ZP_03114222.1| beta-lactamase [Bacillus cereus 03BB108]
 gi|218903102|ref|YP_002450936.1| beta-lactamase [Bacillus cereus AH820]
 gi|225863912|ref|YP_002749290.1| beta-lactamase [Bacillus cereus 03BB102]
 gi|228914571|ref|ZP_04078180.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228927044|ref|ZP_04090110.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228945594|ref|ZP_04107944.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229121530|ref|ZP_04250757.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 95/8201]
 gi|229184187|ref|ZP_04311396.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|300117552|ref|ZP_07055339.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           SJ1]
 gi|51976936|gb|AAU18486.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|118416632|gb|ABK85051.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|195990521|gb|EDX54502.1| beta-lactamase [Bacillus cereus W]
 gi|196022107|gb|EDX60795.1| beta-lactamase [Bacillus cereus 03BB108]
 gi|196027285|gb|EDX65904.1| beta-lactamase [Bacillus cereus NVH0597-99]
 gi|218535102|gb|ACK87500.1| beta-lactamase [Bacillus cereus AH820]
 gi|225788359|gb|ACO28576.1| beta-lactamase [Bacillus cereus 03BB102]
 gi|228599302|gb|EEK56913.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228661994|gb|EEL17607.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 95/8201]
 gi|228814112|gb|EEM60383.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228832779|gb|EEM78350.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228844890|gb|EEM89932.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|298725087|gb|EFI65742.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           SJ1]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEVDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L++  F
Sbjct: 293 MGTKGKTKRFTETNKLMTYAF 313


>gi|218233888|ref|YP_002366673.1| beta-lactamase [Bacillus cereus B4264]
 gi|218161845|gb|ACK61837.1| beta-lactamase [Bacillus cereus B4264]
          Length = 317

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ IS  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKISAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|125718743|ref|YP_001035876.1| penicillin-binding protein 3 [Streptococcus sanguinis SK36]
 gi|125498660|gb|ABN45326.1| Penicillin-binding protein 3, putative [Streptococcus sanguinis
           SK36]
          Length = 419

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 132/372 (35%), Gaps = 38/372 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTANPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETDYTSTAK 180

Query: 160 ---QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLG 212
                 +  +A D+A++S  +  DFPQ          +I G    N N+          G
Sbjct: 181 KSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNFRSG 240

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKT 268
            DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    N T
Sbjct: 241 VDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQNFT 300

Query: 269 DRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
               +      N                  S++    ++       +++ + +++     
Sbjct: 301 QTTIVAEGEAYNKSKSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGFQAP 360

Query: 323 FEKITLLKNKIT 334
            +K T L     
Sbjct: 361 LKKNTELGTLTY 372


>gi|319898924|ref|YP_004159017.1| Penicillin-binding protein [Bartonella clarridgeiae 73]
 gi|319402888|emb|CBI76439.1| Penicillin-binding protein [Bartonella clarridgeiae 73]
          Length = 394

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 83/337 (24%), Positives = 141/337 (41%), Gaps = 22/337 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M + L ++   +   IF     AE          + D NT  ++ +   D  + PASLTK
Sbjct: 1   MHRLLRVLFSLIWILIFNEQGQAENFQTSASQLLIFDDNTSTILFKKQSDVAFFPASLTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIV 113
           LMTA +VF  LK+          +S+NA          +    K+ + +++ + L+ L++
Sbjct: 61  LMTAEIVFHQLKKGFLNKEQKFKVSENAWRKGGAPSGTTTMFAKEKTEISVFDLLRGLVI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            + ND A+ +AE +   E  F + MN  +K LGL  +HF+NA G  + G + T  DM  L
Sbjct: 121 VNGNDAAITLAEGIAGNEANFAKLMNKRAKTLGLLNSHFVNATGFPEEGQFITLNDMITL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW--AVGTFLGADGMKTGFTCASGFNIVAS 231
           +  I  ++P Y   +             N N   +  T +  +G+  G++  +GF+ V S
Sbjct: 181 ARHIAHEYPDYYALYSEPDFTWNKITQHNKNPLISQVTDVKIEGLGFGYSEETGFSTVIS 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY---QQNLSNE 288
           A +  Q L   + G  +   R K    +L     N   +K         Y      + N 
Sbjct: 241 AYKNQQRLFLAVSGLQNNKERTKEIKRILQWSLTNFDLKKIFTKGEIVGYASVYGGVRNS 300

Query: 289 VPNI----------SEEVCTTQKEIINYNTQMKEAKD 315
           VP +          +++     K II Y+  +K   +
Sbjct: 301 VPLVVQEPISFMLSNKKTLNDVKAIIRYHGPLKAPIN 337


>gi|81427894|ref|YP_394893.1| D-alanyl-D-alanine carboxypeptidase precursor [Lactobacillus sakei
           subsp. sakei 23K]
 gi|78609535|emb|CAI54581.1| D-alanyl-D-alanine carboxypeptidase precursor [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 428

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 131/384 (34%), Gaps = 49/384 (12%)

Query: 1   MRQFLVIIAMAMLSNI------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M   L++  +A+ ++           + A          +D  +G V+ E   D     A
Sbjct: 1   MTGLLLVTPVAVATSATQQGVQAATATSAPQVDASAAIAIDPQSGQVLYEKNADQVLPIA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           S+TK++TAYVV   +K+ K            I K + +   +N   +     ++    + 
Sbjct: 61  SMTKMITAYVVLDQIKQGKLKWNQTTKPDAAIYKLSQDKELTNVPLQADKAYSVRELYQA 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------ 158
           +++ SAND A+ +A  +  ++K FV  M       G+      +  G+            
Sbjct: 121 MLIASANDAAMMLANLVAGSQKNFVDLMRQQVSQWGIKDAKLYSVSGLNNQYLTGETYPG 180

Query: 159 --VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-----KYPNTNWA----- 206
                 +  +A ++AI++  +   FP+ +   +        K     K    N       
Sbjct: 181 SAADAENEMSASEVAIVAQHLLKTFPEVLETTKQTAFTFGPKTIDETKMATWNLMLPGQN 240

Query: 207 -VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--RNKVSASLLSMG 263
                   DG+KTG T  +G     +A +  Q ++ V++ A   +   R   +  ++   
Sbjct: 241 NAPKDYVVDGLKTGTTDKAGDCFTGTATKDGQRILTVVMHANGSDKGRRFIETNKVMQYV 300

Query: 264 FYNKTDRKKINYI-------IKDFYQQNLSNEVPNISEEVCTTQKEI-----INYNTQMK 311
           F N    + +            D              + +     +      ++++ Q+ 
Sbjct: 301 FDNWQQTQLVKKGATIKPFATADVKYGRTKTVALETPQAIAMWVPKGTQVANVDWDYQVV 360

Query: 312 EAKDKESHFIDFEKITLLKNKITK 335
           +   K       +K  ++     K
Sbjct: 361 QGGQKRQLTAPVKKAAVIGKVTPK 384


>gi|228477772|ref|ZP_04062400.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus salivarius
           SK126]
 gi|228250464|gb|EEK09678.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus salivarius
           SK126]
          Length = 417

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 78/366 (21%), Positives = 143/366 (39%), Gaps = 35/366 (9%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   +++IA+ +L    P L+  +T        +   ++  TG V+ E     P   A
Sbjct: 3   MKKLQHIIMIALILLGLATPALAQEQTDDFNVSAKHAIAIEATTGKVLYEKDATTPDGVA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 63  SMTKILTAYMVYKAVDQGKITWDTEVDISDYPFNLTVDSEVSNVPLDSRKYTVKQLLDAT 122

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  +E  FV  M    K   ++     NA G+             
Sbjct: 123 LISSANSAAIALAEKISGSESAFVDAMTAQLKEWSITDAKLYNASGLNNKYLGDNRYPGS 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +    +     K    N+          G
Sbjct: 183 KPDDENSMSALDVAIIADHLIKDYPQVLEITKQTETDFEGDNKLTTHNYMLEGQDNYREG 242

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI V++    G  D   R   +  LL     N  
Sbjct: 243 VDGLKTGTTELAGASFVAHSNENGMSLITVVMNADNGGEDEAARFTATNELLDYVTQNWE 302

Query: 269 DRKKINYI--IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-ESHFIDFEK 325
            +        +K    +    +   IS ++ +    I   N++    K K ++     +K
Sbjct: 303 IKTLNTKGQIVKKNDIKVADGDRQTISAKLESDLTVIQKINSKNDAVKIKAKTITAPIKK 362

Query: 326 ITLLKN 331
              +  
Sbjct: 363 GDTIGT 368


>gi|323350405|ref|ZP_08086068.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           VMC66]
 gi|322123342|gb|EFX95020.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           VMC66]
          Length = 422

 Score =  150 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 132/375 (35%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGNLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G++    +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGITDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKSKDTENKFSAYDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +                         S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSHSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|310644848|ref|YP_003949607.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Paenibacillus
           polymyxa SC2]
 gi|309249799|gb|ADO59366.1| Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           polymyxa SC2]
          Length = 313

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 21/281 (7%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V+I +  ++     L            L+D +TG ++ +   D P   A+++KLMT  +V
Sbjct: 15  VLIILIFITLGPRLLIGKPNVDADAAVLMDMHTGELLMDVNGDKPMPSANMSKLMTELLV 74

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              ++  +      + IS+ AS     N + + G  MT+    + ++V SAND AVA+AE
Sbjct: 75  LEDIRTGRLGWNDEVRISRYASTVGGVNLSLRYGERMTVSELFQSMVVYSANDAAVALAE 134

Query: 126 SLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGV------VQH------GHYTTARDMAI 172
                E  FV+ MN  +  +G    + F NA G         H          TA D A 
Sbjct: 135 RSSGNEYAFVKRMNEKAAQIGLSPDSRFSNASGAGQSELGPNHPKDIRGETKMTASDTAK 194

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV--------GTFLGADGMKTGFTCAS 224
           L+  + T  P+ +       +E+K K    +N            ++ G DG+K G+T  +
Sbjct: 195 LASYLITSHPEILRTSSRTQMELKDKGIYISNTNWMLPSLAGPYSYAGTDGLKAGYTSDA 254

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           G+    +A Q  + L+AV+LGA  +  R + +  L   GF 
Sbjct: 255 GYCFTGTAEQHGKRLVAVVLGAPSKEERFEQTRKLFDYGFS 295


>gi|295110604|emb|CBL24557.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 439

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 71/329 (21%), Positives = 122/329 (37%), Gaps = 18/329 (5%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            A+ ++       A         L+D +TG ++ +   D    PAS TKLMT  V     
Sbjct: 36  AAVATDSIANWPAAPAVTSETAVLMDADTGAILYDKGMDEYRYPASTTKLMTLLVAIENS 95

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             K  +  T   +      +  SN   + G TMT+ +      +KSAN++   IAE +  
Sbjct: 96  SPKDVVTFTETGV--RDVTWDSSNINAQLGETMTMKDCWFAAYIKSANEVCAQIAEYVGG 153

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHY 187
           TE  FV+ MN  +K LG + THF+NA G+    HY+ A D+A +      +  F + +  
Sbjct: 154 TEANFVEMMNQKAKKLGCTHTHFVNASGLPDENHYSCAEDLAKIMRAGLKNARFRKVLET 213

Query: 188 FQIKGLEIKGKKYPNTNWAVG--------TFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                         + +  V          + G  G KTGF+  +   +  +A +  ++ 
Sbjct: 214 VSYTIPATNLSAARSLHTHVPLLAKESSLYYEGCIGGKTGFSTEAQNCLAVAAERNGRTY 273

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKK------INYIIKDFYQQNLSNEVPNIS 293
           IAV +   D       S +L    F +    +       +   +        S +    +
Sbjct: 274 IAVTMRDTDLGINCADSTALFDYAFNSFDSIEVDGKAMTVPKGVTAADLTMESKQKGKKT 333

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFID 322
                 Q + + Y T       + +    
Sbjct: 334 LNQYYYQGQFVGYVTVKDTPSPEPAQEAK 362


>gi|52143878|ref|YP_082950.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|51977347|gb|AAU18897.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
          Length = 374

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 121/308 (39%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++ ++G V+       P   AS+TK+MTA +     K K       + +S 
Sbjct: 29  NVSARNAVLMEQHSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----ERVLVSN 83

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAE++  + + FV  MN  +K 
Sbjct: 84  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVGGSIEGFVYLMNEKAKQ 143

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 144 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTRYAMGN-ETFKKIFGTKTYKSDSWDYPWK 202

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 203 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 259

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    +  +K   DK +  
Sbjct: 260 DKGFDRFEQTKVLGQGALAEITEKKYANHVYTKNSFSVPLTEEEKKSVVLKVELDKSAKL 319

Query: 321 IDFEKITL 328
           +D  K+  
Sbjct: 320 VDGVKVGK 327


>gi|52839376|emb|CAH57481.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
 gi|52839378|emb|CAH57482.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 389

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 135/343 (39%), Gaps = 31/343 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            T    +   ++ NTG ++ E     P   AS+TKL+T Y+V+  L+     L+TP+ IS
Sbjct: 1   FTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEALENGSITLSTPVDIS 60

Query: 84  KNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
               +      +++   +    T++  L+  +V SAN  A+A+AE +  +EK FV  M  
Sbjct: 61  DYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIALAEKIAGSEKDFVDMMRA 120

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
                G+     +N  G+                  +  +A D+AI++  +   +PQ + 
Sbjct: 121 KLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYDVAIVARNLIKKYPQVLE 180

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             +            +TN+ +        G DG+KTG T  +G + V + ++    +I V
Sbjct: 181 ITKKPSSTFARMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESFVGTTVEKGMRVITV 240

Query: 243 ILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII------KDFYQQNLSNEVPNI 292
           +L A     +   R   ++SL+       T RK +                         
Sbjct: 241 VLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQDSKAPVQDGKEDTVTAVA 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 301 PEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYE 343


>gi|332359810|gb|EGJ37624.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1056]
          Length = 422

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 132/375 (35%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTANPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                  S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSKSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|56808710|ref|ZP_00366431.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes M49 591]
          Length = 401

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/341 (21%), Positives = 138/341 (40%), Gaps = 31/341 (9%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           L+        +  +++ ++G V+ E     P   ASLTKL+TAY+V   +K  +  L+  
Sbjct: 13  LAADFQVGAEHAIVVEADSGRVLYEKDAKTPDAIASLTKLVTAYLVLDKVKSGQLQLSDQ 72

Query: 80  ITISKNASEYPPSN---STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           + +S  A E        +      T ++ + L   +V S+N  A+A+AE +  +E  FV 
Sbjct: 73  VNLSDYAFELTKDRSLSNVPFDKKTYSVQDLLTATLVASSNSAAIALAEKVAGSELHFVN 132

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYTTARDMAILSWRIKTDFP 182
            M     + G+++   +NA G+                  +  +A+D+AI++  +  DFP
Sbjct: 133 QMREQLSHWGITSGKILNASGLPNEVLKDHRYPGSALEEENMLSAQDVAIVTMHLLEDFP 192

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMKTGFTCASGFNIVASAIQGDQS 238
           + +   +   ++  G    + N  +        G DG+KTG T  +G  +V ++I+    
Sbjct: 193 EILEITKQTEVDFAGNSIKSFNQLLPGMAKGRAGVDGLKTGTTDLAGHCLVVTSIENGMR 252

Query: 239 LIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKINYI------IKDFYQQNLSNE 288
           LI VIL A       NTR + +  LL         RK +                 +   
Sbjct: 253 LITVILNADGSDKNQNTRFEQANRLLDYVARTYCRRKILKKGSLVSERSLPIQDGQVKEL 312

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +++E+V    ++        +    + S      K  ++
Sbjct: 313 PISVAEDVTIILQQGEQVPKPKQFMISETSLLAPITKGEVV 353


>gi|327460573|gb|EGF06908.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1]
          Length = 422

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 132/375 (35%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TFKKSKDTENKFSAYDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVDQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                  S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSKSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|311030756|ref|ZP_07708846.1| D-alanyl-D-alanine carboxypeptidase [Bacillus sp. m3-13]
          Length = 384

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/347 (21%), Positives = 136/347 (39%), Gaps = 22/347 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +R+   I  +++L           +           L++  +G +I E         AS+
Sbjct: 4   IRKMFSIALVSLLIFSICIPHNVHAEQVGVSARNAVLIEQESGRIIYEKDAHDKQRIASI 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K     L   + +S+ A     S+   K G  + L++ +  L+++S 
Sbjct: 64  TKVMTAILAIESGK-----LDEIVKVSEKAVRAEGSSLYLKPGEKIKLEHLVYGLMLRSG 118

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSW 175
           ND AVAIAE +  + + FV  MN  +  LG++ T F N HG+  H  HY++A DMA+L+ 
Sbjct: 119 NDSAVAIAEHVGGSLEGFVFMMNEKAAELGMTNTEFANPHGLDDHENHYSSAYDMALLTR 178

Query: 176 RIKTDFP-------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               +         +        G               G +  A G KTG+T  +   +
Sbjct: 179 YAMENDKFKEVAGTKVYRAPAAPGESWDRSWTNKHRLVTGMYQYATGGKTGYTKRAKRTL 238

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + +A +    +IAV L   D     K    + +  F +            D  + +    
Sbjct: 239 ITTASKEGLDVIAVTLNGPDD---WKDHIYMFNRAFVDYKLYDIAEKGELDNVKDDFYKG 295

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             ++S ++     +    N ++K     E+   D++    +   + +
Sbjct: 296 KVSLSRDIKFPMTQKERENVRIKVT--LETPKKDWKDEGNVPEVVGE 340


>gi|229029678|ref|ZP_04185753.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH1271]
 gi|228731620|gb|EEL82527.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH1271]
          Length = 317

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D++ G +I ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAAMIIDSSNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSVKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QRMNEKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QG+  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGNTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTKGKTKRFTETNKLMSYAF 313


>gi|227872772|ref|ZP_03991092.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227841371|gb|EEJ51681.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 464

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 74/352 (21%), Positives = 141/352 (40%), Gaps = 25/352 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAE-----TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +  ++++          +++A              ++D  TG V+ E   D    PAS+T
Sbjct: 11  RIFLLLSFCFFILFHSVVAMAASWPTADLTAESAIVVDAETGAVLYEKNGDVREYPASIT 70

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVK 114
           K+MTA VV          L   +T S +A        SN+  ++G  +T+++ L  L++K
Sbjct: 71  KVMTALVVLEHA-----SLEDKVTFSHDAVYNVDRGSSNAQIEEGDVLTVNDCLHALLLK 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAN+ A A+AE +  + + F + MN  +K LG + THF N  G+    HYTTARDMA++ 
Sbjct: 126 SANEAANALAEHVAGSREAFAEMMNEKAKELGCTGTHFQNPSGLQDENHYTTARDMALIG 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG-----------TFLGADGMKTGFTCA 223
                +         +       K+ P  N                       KTG+T  
Sbjct: 186 MAAFQNKAFLEIEKNLSHTLGNLKRLPEGNTIYMEHKMMLSNTKFYDKRVVAGKTGYTQI 245

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           +G  +++ A    + ++ V+L   +  +    + +LL + F    ++    +       +
Sbjct: 246 AGNTLISLAEDQGRKVVTVVLKDKNP-SHYTDTKALLDLAFSETENQTLGEHPGALEALR 304

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                   I+EE      + +  +     ++D   +     +  +  + + K
Sbjct: 305 KELVSAGKITEENKIHFLDTVKISLPKGASQDGLQYVFTDIEGDVPASALGK 356


>gi|228900575|ref|ZP_04064797.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           IBL 4222]
 gi|228859058|gb|EEN03496.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           IBL 4222]
          Length = 309

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 45  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 104

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 105 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 164

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 165 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 224

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 225 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 284

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 285 MGTSSKTKRFTETNKLMSYAF 305


>gi|153855278|ref|ZP_01996444.1| hypothetical protein DORLON_02458 [Dorea longicatena DSM 13814]
 gi|149752277|gb|EDM62208.1| hypothetical protein DORLON_02458 [Dorea longicatena DSM 13814]
          Length = 452

 Score =  150 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 126/339 (37%), Gaps = 34/339 (10%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      L+D ++G V+     D     AS TK+MT  +    L+E        I 
Sbjct: 79  EPAELYARSAVLMDADSGRVLFGKDTDVVRPMASTTKIMTCILALESLREH---PDQTIE 135

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S  A+  P  +   +KG    + + L  L+++S ND AVA+AE +  + ++F + MN  
Sbjct: 136 VSDQAASQPKVHLGMQKGEVFYIKDLLYSLMLESHNDSAVAVAEGIAGSVEEFAKEMNAK 195

Query: 142 SKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKT---------DFPQYMHYF 188
           +  +G   THF+  +G+        H TTA D+A +               +  +   Y 
Sbjct: 196 AAEIGCKNTHFITPNGLDAEDEGGVHSTTAEDLAKIMRYCIMTSGEKETFLEVTRTKEYQ 255

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                  +     N N  +    GA   KTGFT  +G+  V S    D++ I  +L    
Sbjct: 256 FQDADRKRTFSCHNHNAFLDMMDGALSGKTGFTADAGYCYVGSLRWDDRTFIVALLACGW 315

Query: 249 RNT---RNKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVP------------- 290
            N    + K +  L+  G  +   R       I +      + ++ P             
Sbjct: 316 PNNKGYKWKDTRKLMEYGLEHYQYRDIDKKMQIPEIKVAGGVDDKKPYQYCLNVPVKIER 375

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
              E      ++      +++ AK   +     EKI +L
Sbjct: 376 PAEENSKILMRDGEELRAKLELAKYWNAPLKKGEKIGML 414


>gi|304391426|ref|ZP_07373368.1| penicillin-binding protein [Ahrensia sp. R2A130]
 gi|303295655|gb|EFL90013.1| penicillin-binding protein [Ahrensia sp. R2A130]
          Length = 289

 Score =  150 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 94/264 (35%), Positives = 136/264 (51%), Gaps = 4/264 (1%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR  ++    + A    ++                 ++D  +G V+     D    PASL
Sbjct: 21  MRALVIAALALFATGCTTSSVITAPYEPPTARYAAIVIDAKSGKVLHNTRADAIRFPASL 80

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT Y+ F  L  ++  L + I +S  A+  P S    K G T+ +D AL+ L VKSA
Sbjct: 81  TKMMTMYMAFEALSRRRISLNSEIPVSSYAASKPASKLYLKAGETINVDTALQALAVKSA 140

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND+A A+AE L  +E  F + M   +++LG+ +T F NA G+      TTARDMA LS  
Sbjct: 141 NDVATAMAEFLGGSEATFARMMTARARSLGMRSTTFRNASGLPDRLQVTTARDMATLSLA 200

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           ++  +PQY HYF       KGK     N  +G   GA+G+KTG+T ASGFN+  S  + +
Sbjct: 201 LQKRYPQYFHYFGKSTFVWKGKTIRGHNRVLGMLKGANGIKTGYTRASGFNLATSVKRPN 260

Query: 237 QSLIAVILGALDRNTRNKVSASLL 260
           + L+ VILG      RN+    LL
Sbjct: 261 KHLVGVILGEDSGKVRNRHMVELL 284


>gi|266622661|ref|ZP_06115596.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288865598|gb|EFC97896.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 480

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 73/301 (24%), Positives = 120/301 (39%), Gaps = 33/301 (10%)

Query: 1   MRQFLVII--------AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+ FL  I           M +   P        +     ++D ++G ++     D P+ 
Sbjct: 1   MKHFLKKILCWTLISNCFLMTAYAAPAWPAGPDIQAEAGVVIDMDSGAILGGKAYDTPYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK----NASEYPPSNSTFKKGSTMTLDNAL 108
           PAS+TKL+TA +V    K     L   +T S     N      +     +G  +++++ L
Sbjct: 61  PASITKLLTALLVLEHSK-----LDEMVTFSNSAVYNVESDSGNKLNVAEGDQLSVEDCL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             L+V S N  A A+AE +  +++ FV+ MN+ +  LG   +HF N  G+     Y TAR
Sbjct: 116 YSLLVHSCNQAANALAEHVAGSQEAFVKMMNDKAAALGCKDSHFDNPSGLNGDTQYVTAR 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGL---------------EIKGKKYPNTNWAVGTFLGA 213
           DMA +S     +         +K                 E K     N + +   +   
Sbjct: 176 DMAAISRAAFAEPDIIRISAALKHTFPPTINNPEGLTIYAENKLILNTNDSSSQYYYPPV 235

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
            G KTG+   +G  +V  A +  + LI+VIL             +LL  GF + T+    
Sbjct: 236 KGGKTGYLLKAGNTLVTYAEKDGKRLISVILKG-SPGQYYLDGKALLEFGFEHFTNYNVA 294

Query: 274 N 274
            
Sbjct: 295 E 295


>gi|229196199|ref|ZP_04322948.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus m1293]
 gi|228587264|gb|EEK45333.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus m1293]
          Length = 317

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 128/265 (48%), Gaps = 12/265 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++  + P   I          ++D + G +I ++  +  + PAS++K+MT Y++   +  
Sbjct: 49  LVEKVVPPKYIPPEIDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTVYLLLENVHN 108

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K     P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+E
Sbjct: 109 GKVRWEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSE 168

Query: 132 KKFVQHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           K FVQ M+  +K   +S    F NA G+          TA D+A L++ +  D+P+ +  
Sbjct: 169 KDFVQLMDAKAKQFKMSEHAKFANASGLQEPDGSETKMTAGDVANLAYHLIKDYPEILEV 228

Query: 188 FQIKGLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             ++  ++              N N       G DG+KTGFT ++G+    +A QGD  +
Sbjct: 229 THLRQSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRI 288

Query: 240 IAVILGALDRNTRNKVSASLLSMGF 264
           I V++G   +  R   +  L+S  F
Sbjct: 289 ITVVMGTKGKTKRFTETNKLMSYAF 313


>gi|307945901|ref|ZP_07661237.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseibium sp. TrichSKD4]
 gi|307771774|gb|EFO30999.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseibium sp. TrichSKD4]
          Length = 301

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 86/233 (36%), Positives = 139/233 (59%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               +L+  TG  +     D P  PASLTK+MT Y++F  + + +  L+TP+ +S NA+ 
Sbjct: 65  RSVLVLNGYTGRELLSENADAPRFPASLTKMMTLYLLFEEVSKGRYTLSTPLNVSANAAS 124

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
            PPS    K GST+T++ A + L +KSAND+A+A+AE++  +E  F + M   +K+LGL+
Sbjct: 125 QPPSKIGLKPGSTITVEQAARALAIKSANDVAIAVAENISGSEAAFARKMTQKAKSLGLT 184

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T F+NA G+      TTARDMA L   +K  FPQY  Y++ + +   G+++  TN  +G
Sbjct: 185 RTRFVNASGLPNPRQVTTARDMAKLGMALKRRFPQYASYYKARSVTYNGRRFKATNNLIG 244

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
              G DG+KTG+   SG+N+VA++ +  + L+ V++G    + R+     L+ 
Sbjct: 245 KVAGVDGLKTGYVRLSGYNLVATSRRNGRKLVVVVMGGASESARDTEVTQLIE 297


>gi|229043743|ref|ZP_04191445.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH676]
 gi|228725596|gb|EEL76851.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus AH676]
          Length = 317

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTATDVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|229155565|ref|ZP_04283673.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus ATCC
           4342]
 gi|228627883|gb|EEK84602.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus ATCC
           4342]
          Length = 317

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEIDAKAVMIIDASNGDIIYQQNENEAFAPASMSKMMTAYLLLENVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTKGKTKRFTETNKLMSYAF 313


>gi|304394240|ref|ZP_07376163.1| serine-type D-Ala-D-Ala carboxypeptidase [Ahrensia sp. R2A130]
 gi|303293680|gb|EFL88057.1| serine-type D-Ala-D-Ala carboxypeptidase [Ahrensia sp. R2A130]
          Length = 412

 Score =  150 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 20/316 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR  +     A L+     L             +D ++G V++       W+PASLTKLM
Sbjct: 3   MRSIIAFFLTAWLALPAHALPH---------ISVDLDSGRVLSAQQAFDLWHPASLTKLM 53

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V F  ++  +     P+ +S NA + PPS   + +G+TM L++ALKLL++KSANDI+
Sbjct: 54  TALVAFRAIESGRLTADHPVIVSDNARKAPPSKMGYSRGTTMRLEDALKLLLIKSANDIS 113

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AES+  +   F Q MN  +  LG++ ++F+N HG+      TTARDMAIL   +   
Sbjct: 114 IALAESVSGSVPAFSQAMNAEAARLGMTGSNFVNPHGLHDRRQVTTARDMAILLRVLHKQ 173

Query: 181 FPQYMHYFQ---------IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
           +PQY               K  +   + Y + N  +  F GADG KTGF CASG+N   +
Sbjct: 174 YPQYKAMLSTPSLLAPSRTKNGKTIQRVYYSYNLLLERFRGADGFKTGFVCASGYNFAGA 233

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
           A +  + + A++LG   + +R   +A L+  GF           I +      + +   N
Sbjct: 234 ATRSGRRIAAIVLGRDGQTSRAVDAAKLIEEGFR--LPTTTGTPITELKPNGAVPSGPRN 291

Query: 292 ISEEVCTTQKEIINYN 307
           +   +CT       Y 
Sbjct: 292 MRSVMCTEAARAARYE 307


>gi|153810801|ref|ZP_01963469.1| hypothetical protein RUMOBE_01185 [Ruminococcus obeum ATCC 29174]
 gi|149833197|gb|EDM88279.1| hypothetical protein RUMOBE_01185 [Ruminococcus obeum ATCC 29174]
          Length = 393

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/345 (20%), Positives = 123/345 (35%), Gaps = 30/345 (8%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           ++F               L+D ++G V+ +   + P   AS TK+MT  +     K    
Sbjct: 22  SVFASEKSPGNLYALSAVLMDGDSGRVLYQKSGNTPRPNASTTKVMTCILALENGKG--- 78

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                + +S NA   P        G    L++ L  L+++S ND AVAIAE +  +   F
Sbjct: 79  --DDYVKVSANAVSQPEVRLGLSIGEQYYLEDLLYSLMLQSHNDSAVAIAECIGGSVDNF 136

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQI 190
              MN  +K +G   THF+  +G+        H+TTA D+A++      +          
Sbjct: 137 SAMMNAKAKEIGCKNTHFVTPNGLDAENSGGTHHTTAEDLALIMRYAIHNDVFLKITQTE 196

Query: 191 KG-----LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
           +       + +     NTN  +    G    KTG+T  +G+  V +  + +++ I  +LG
Sbjct: 197 EYSFSDLSKKRHFSVHNTNALLHMTDGVLAGKTGYTGDAGYCYVCACQKDNKTFIIALLG 256

Query: 246 ALD---RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ---------QNLSNEVPNIS 293
           A     +N +   +  LL+ G  N   R         +              S+      
Sbjct: 257 AGWPDHKNYKWHDTLELLNYGNSNYEYRSFWQEPELSYIPVENGILNDFGAGSSVYTGGQ 316

Query: 294 EEVCTTQKEIINYNTQMKE----AKDKESHFIDFEKITLLKNKIT 334
             V   +K                + KE       +   +   I 
Sbjct: 317 ISVSDNEKNRQILIGSDDRLQYQIRLKEHLSAPVRRGEQIGQIIY 361


>gi|228939114|ref|ZP_04101709.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228958264|ref|ZP_04119992.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228801423|gb|EEM48312.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228820537|gb|EEM66567.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 309

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 45  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 104

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 105 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 164

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 165 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 224

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 225 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 284

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 285 MGTSSKTKRFTETNKLMSYAF 305


>gi|229172673|ref|ZP_04300231.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus MM3]
 gi|228610805|gb|EEK68069.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus MM3]
          Length = 317

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 12/265 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +   + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +  
Sbjct: 49  LAEKVVPPKYIPPEIDAKVAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENIHN 108

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K     P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTE
Sbjct: 109 GKVRWEDPVKMSAKAAQTEGARIQVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTE 168

Query: 132 KKFVQHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           K FVQ MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +  
Sbjct: 169 KDFVQLMNAKAKELKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEV 228

Query: 188 FQIKGLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             ++  ++              N N       G DG+KTGFT ++G+    +A QGD  +
Sbjct: 229 THLRQSQLAFNNINVVSTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRI 288

Query: 240 IAVILGALDRNTRNKVSASLLSMGF 264
           I V++G   +  R   +  L+S  F
Sbjct: 289 ITVVMGTKGKTKRFTETNKLMSYAF 313


>gi|299769193|ref|YP_003731219.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter sp. DR1]
 gi|298699281|gb|ADI89846.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter sp. DR1]
          Length = 439

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 85/314 (27%), Positives = 145/314 (46%), Gaps = 14/314 (4%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K      IT +      ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKKEEIITATPVVGVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPPGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  + P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 GQAVIKETPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +         + L+ ++LG      R +++  L+++ +    D   I           + 
Sbjct: 241 RPSFSSDLAQRRLLVIVLGTPSAVKRAEIADKLMNLAYTYTRDEVIIPEQKLIAELPVVK 300

Query: 287 NEVPNISEEVCTTQ 300
           + +           
Sbjct: 301 STLKMFKVATKQPT 314


>gi|218896938|ref|YP_002445349.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|228964967|ref|ZP_04126069.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218545350|gb|ACK97744.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|228794708|gb|EEM42212.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 317

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|229069527|ref|ZP_04202816.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus F65185]
 gi|228713666|gb|EEL65552.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus F65185]
          Length = 309

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 45  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 104

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 105 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 164

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 165 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVAQLAYHLIKDYPEILEVTHLR 224

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 225 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 284

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 285 MGTSSKTKRFTETNKLMSYAF 305


>gi|304407580|ref|ZP_07389232.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
 gi|304343531|gb|EFM09373.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Paenibacillus
           curdlanolyticus YK9]
          Length = 326

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 23/266 (8%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                +     L+D NTG  I     +    PAS++KLMT  VV   ++  K      +T
Sbjct: 33  AVPHIEAKSAILIDANTGQTIFAQGANKALPPASMSKLMTELVVLETVRAGKLGWKDQVT 92

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +S  A+    + +  + G   T+    + + V SAND AVA+AE +  +E++FV+ MN  
Sbjct: 93  VSPYAANVLGAGAGLRNGERHTVKELFESMAVHSANDSAVALAEWIGGSEREFVKLMNEK 152

Query: 142 SKNLGLSATH--------------FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           +K +GLS +                             TARD+A+L+  +   +P+ +  
Sbjct: 153 AKAIGLSDSTVFANATGLSSSDLAMYAQSAAADGETVMTARDVALLARYMIRSYPEVLTI 212

Query: 188 FQIKGLEIKG-----KKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              + + +            TN         + G+DG+KTG+T  +G+    +  +G   
Sbjct: 213 TSREAVGLNPGASDDAALRTTNLMLPGERFAYPGSDGLKTGYTERAGYCFTGTTSRGGTR 272

Query: 239 LIAVILGALDRNTRNKVSASLLSMGF 264
           LIAV++GA   + R   +  L  +GF
Sbjct: 273 LIAVVMGAESADGRFIETERLYDLGF 298


>gi|327462875|gb|EGF09197.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1057]
          Length = 422

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 131/375 (34%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +       + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYTLTSNPNISNVPLEAKRYKAKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                  S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGETYNKSNSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|258590884|emb|CBE67179.1| putative Serine-type D-Ala-D-Ala carboxypeptidase [NC10 bacterium
           'Dutch sediment']
          Length = 355

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 18/257 (7%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           F++  E        L+D +TG ++   +     +PAS TK+MTA ++    +     L  
Sbjct: 82  FVNDPEALSASSALLMDADTGAILFARHHMERRSPASTTKIMTALLILEEGQ-----LDD 136

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + IS+ A+    +    ++G  + L + L  +++KSAND A+A AE +  +E++FV  M
Sbjct: 137 KVLISERAAAVSGTGLGLRRGQRVVLRDLLWAILLKSANDAALAAAEHVGGSEEQFVARM 196

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL----- 193
           N  + +LG+  T F N HG+    HY+TA D+AIL+ +   +          +       
Sbjct: 197 NAKAASLGMQGTQFSNPHGLDHQDHYSTAFDLAILARQALRNPTFARMVQTREAQVAILT 256

Query: 194 -----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                 +K +     N  +G F GADG+KTG+T  +G  +VASA +GD  LIAV+L    
Sbjct: 257 GRNGSVVKRRVIRTHNQLLGQFSGADGVKTGYTSLAGRCLVASATRGDHQLIAVLLN--- 313

Query: 249 RNTRNKVSASLLSMGFY 265
            + R   +A+LL  GF 
Sbjct: 314 DSRRWVEAAALLEYGFA 330


>gi|168186274|ref|ZP_02620909.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum C str.
           Eklund]
 gi|169295810|gb|EDS77943.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum C str.
           Eklund]
          Length = 375

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/358 (19%), Positives = 136/358 (37%), Gaps = 31/358 (8%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDH 49
           M++      ++ I +       PF+   E               +D+ +  V+ E   + 
Sbjct: 1   MKKLRVVSIILNICLLFNIAFVPFVEAVEPKNKSIYVDARCAIAMDSKSKCVLYEKNSEM 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS TK+MT  V   +       L     +S  A+    S   +KKG  ++L   L 
Sbjct: 61  LVPIASTTKIMTTLVALKY-----GNLDRKFEVSPKAASIRGSKVGYKKGEQISLKELLY 115

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+++S ND A+ IAE +  + +KF + MN  +  +G   +HF + HG+    HY+TA D
Sbjct: 116 GLMLRSGNDAAITIAEGMSGSVEKFCELMNEYAIEIGAFNSHFESPHGLDSQNHYSTAYD 175

Query: 170 MAILSW----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +A ++         +    +     K      + Y N N  +     A+G+KTG+T  +G
Sbjct: 176 LARITAKAKENKLFNEIVGVKDVDEKKFGF-TRSYHNINKILYQIPNANGVKTGYTGGAG 234

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
             +V S  + D  +I V+L       R K +  +      N   +K  +        ++ 
Sbjct: 235 KCLVTSVKENDDDVIIVVLNCT---PRWKETKKIYDFVKENYDFKKLASKNQVLDKVEDN 291

Query: 286 SNEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL-----KNKITKK 336
                N+  + ++     +      ++ +     S       +  +        ++ K
Sbjct: 292 RGNKINLVCNNDLVIPVGKQEKCEYKIIKPTKLPSRVYKGMNLGKINIYKDGKLVSSK 349


>gi|327468250|gb|EGF13735.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK330]
          Length = 422

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 131/375 (34%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYGTSAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TAKKSKDAENKFSAYDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +                         S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSHSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|56967192|pdb|1XP4|A Chain A, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
           Factor (Pbp3) From Streptococcus Pneumoniae
 gi|56967193|pdb|1XP4|B Chain B, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
           Factor (Pbp3) From Streptococcus Pneumoniae
 gi|56967194|pdb|1XP4|C Chain C, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
           Factor (Pbp3) From Streptococcus Pneumoniae
 gi|56967195|pdb|1XP4|D Chain D, Crystal Structure Of A Peptidoglycan Synthesis Regulatory
           Factor (Pbp3) From Streptococcus Pneumoniae
          Length = 379

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 69/351 (19%), Positives = 138/351 (39%), Gaps = 31/351 (8%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +   ++   T    +   ++ NTG ++ E     P   AS+TKL+T Y+V+  L+     
Sbjct: 2   VSTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEALENGSIT 61

Query: 76  LTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           L+TP+ IS    +      +++   +    T++  L+  +V SAN  A+A+AE +  +EK
Sbjct: 62  LSTPVDISDYPYQLTTNSEASNIPXEARNYTVEELLEATLVSSANSAAIALAEKIAGSEK 121

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIK 178
            FV          G+     +N  G+                  +  +A D+AI++  + 
Sbjct: 122 DFVDXXRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYDVAIVARNLI 181

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQ 234
             +PQ +   +       G    +TN+ +        G DG+KTG T  +G + V + ++
Sbjct: 182 KKYPQVLEITKKPSSTFAGXTITSTNYXLEGXPAYRGGFDGLKTGTTDKAGESFVGTTVE 241

Query: 235 GDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII------KDFYQQN 284
               +I V+L A     +   R   ++SL        T RK +                 
Sbjct: 242 KGXRVITVVLNADHQDNNPYARFTATSSLXDYISSTFTLRKIVQQGDAYQDSKAPVQDGK 301

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +    E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 302 EDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYE 352


>gi|228971991|ref|ZP_04132609.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978601|ref|ZP_04138974.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           Bt407]
 gi|228781097|gb|EEM29302.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           Bt407]
 gi|228787705|gb|EEM35666.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|326939691|gb|AEA15587.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 317

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|260590039|ref|ZP_05855952.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|260539551|gb|EEX20120.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
          Length = 448

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 112/266 (42%), Gaps = 12/266 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                A         L++ ++G V+ +   +    PAS TK+MTA ++   + +    +T
Sbjct: 72  SGWPSAPEISSASGVLMEASSGQVLFDKSMNEIRYPASTTKVMTALIILENIPDLNKNIT 131

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               I  + +    S    + G  +T++  L  +++ SAN++   +A  +  + + F   
Sbjct: 132 FTDIILPDLAPGN-STINAQVGEVLTVEQCLYAIMLASANEVCTQMAVEVAGSVENFTAM 190

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ------YMHYFQIK 191
           MN  +  +G + THF+NA+G+    HYTTA D+A++      +           +     
Sbjct: 191 MNAKAAEIGCTNTHFVNANGLPDPNHYTTAYDLALILREAVKNEAFCKIAGAAKYTIPPT 250

Query: 192 GLEIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                 +   N N         + GA   KTG T A+   +V +A + D +LI V+L + 
Sbjct: 251 NKTAASRNMENHNALLVDGKYYYEGAIAGKTGHTEAARNTLVTAASREDMTLICVVLRSE 310

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKI 273
           +   R   + +L   GF N   +   
Sbjct: 311 NDE-RFTDTRTLFDYGFDNFHSQSLY 335


>gi|153953884|ref|YP_001394649.1| D-alanyl-D-alanine carboxypeptidase-related protein [Clostridium
           kluyveri DSM 555]
 gi|219854499|ref|YP_002471621.1| hypothetical protein CKR_1156 [Clostridium kluyveri NBRC 12016]
 gi|146346765|gb|EDK33301.1| D-alanyl-D-alanine carboxypeptidase-related protein [Clostridium
           kluyveri DSM 555]
 gi|219568223|dbj|BAH06207.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 398

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 14/315 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                         LD+N+  V+ E         AS TK+MTA V   +       L   
Sbjct: 34  AVKEPNVNARCAVALDSNSKVVVYEKNAYELVPMASTTKIMTALVAMKY-----GDLNKK 88

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           I IS  A+    S   +KKG ++ L   L  L+++S ND A+AIAE +  + ++F + MN
Sbjct: 89  IDISPKAASVRGSTVGYKKGESILLKELLFGLMLRSGNDAAIAIAEGISGSVEEFAKLMN 148

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +  LG+  T F   HG+   GHY+TA D+A+++       P +      K ++ +  K
Sbjct: 149 EYAGELGVINTQFQTPHGLDSEGHYSTAYDLALVTS-AAKKEPLFNEIVSSKDVDGEKNK 207

Query: 200 ----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
               Y N N  +     A+G+KTG+T  +G  +V S       +I V+L +     R + 
Sbjct: 208 FSRSYHNINKILWQIPEANGVKTGYTGKAGKCLVTSVAIEKNDIIIVVLNSPG---RWEE 264

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN-ISEEVCTTQKEIINYNTQMKEAK 314
           +  +      N    K  +        +   N +     +++    K    Y T++ + +
Sbjct: 265 TDKIYEYVNKNYKFVKLFSKGDIAAELKINRNNLKLECEDDIVLPIKNGFKYTTKIIKPQ 324

Query: 315 DKESHFIDFEKITLL 329
               +    +KI +L
Sbjct: 325 KIAYNVKKGDKIGML 339


>gi|212702629|ref|ZP_03310757.1| hypothetical protein DESPIG_00657 [Desulfovibrio piger ATCC 29098]
 gi|212673901|gb|EEB34384.1| hypothetical protein DESPIG_00657 [Desulfovibrio piger ATCC 29098]
          Length = 285

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 79/234 (33%), Positives = 124/234 (52%), Gaps = 2/234 (0%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            +++ + G V+ E+ P+    PASLTK+MT YVV   +K  +    T I +    +    
Sbjct: 38  VMINLSNGKVLYEHNPNLSIPPASLTKVMTMYVVMDRIKLGRLKRNTSIRVHPT-ARVGG 96

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S+   +    +T+D  L  + V S ND A+AI++ +    + F   MN+ ++ LG++ T 
Sbjct: 97  SSMRLRPRQKVTVDQLLTGMAVASGNDAAMAISQHISGNSRNFTHLMNHKARQLGMTRTV 156

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           F N  G+   G  TTARDMA L+       PQ M Y  ++     G+    TN  +G   
Sbjct: 157 FKNPTGLPAAGQRTTARDMATLARAYLRSHPQAMRYHSLRSFRFNGRTLGATNTMLGI-P 215

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           G DG+KTG+T ASG+NI+ +A +G   L+ V++G   R  R+ V+ SL+  GF 
Sbjct: 216 GVDGLKTGWTVASGYNIIVTARRGKTRLLVVVMGGRSRAARDMVAHSLIEAGFK 269


>gi|229127385|ref|ZP_04256380.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-Cer4]
 gi|229144594|ref|ZP_04272996.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-ST24]
 gi|296502572|ref|YP_003664272.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|228638834|gb|EEK95262.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-ST24]
 gi|228656067|gb|EEL11910.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           BDRD-Cer4]
 gi|296323624|gb|ADH06552.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 317

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|23098797|ref|NP_692263.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
 gi|22777024|dbj|BAC13298.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Oceanobacillus iheyensis HTE831]
          Length = 393

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 82/343 (23%), Positives = 138/343 (40%), Gaps = 21/343 (6%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +R+F ++II  ++   I+   ++A+           L++  +G ++AE   +    PAS+
Sbjct: 2   LRKFYIMIIITSLNFFIWTSTTLADEDLSLHSESAILMEAESGQILAEKNANQQMYPASV 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+ TA  V          L+  + IS+ A+E   +     +G  ++L   +K L++ S 
Sbjct: 62  TKIATAIYVIEN-----GNLSEEVEISEKATEADGTTVFLAEGEKVSLGKLVKGLLINSG 116

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTS-KNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           ND  VAIAE +  + ++F + M     +  G+  T+F N HG+    HYTTA D+A ++ 
Sbjct: 117 NDAGVAIAEHMNGSVREFSKEMTEFFEEKAGIENTNFDNPHGLFDDNHYTTAEDLAKITK 176

Query: 176 RIKTD------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
               +      F      ++ K  E     +         + G  G K G+   SGF +V
Sbjct: 177 YAMQNEKFVKLFGMKSVDWESKTWETTILNHHRMVKGEIPYDGVTGGKNGYVSRSGFTLV 236

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK-----INYIIKDFYQQN 284
            +A Q   +LIAV L         + +  LL  GF +                K F    
Sbjct: 237 TTAEQDGMNLIAVTLKTPLSEQSYEDTVELLDYGFEHYEPFTIDEGTSFMTNGKQFKNSE 296

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               V     +V    KE      +      KE    + EK  
Sbjct: 297 DLTYVHEEGSKVEEEIKEDGKLVIEDNGELLKEFQLDNVEKKQ 339


>gi|228920684|ref|ZP_04084027.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838985|gb|EEM84283.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 309

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 45  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 104

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 105 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 164

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 165 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 224

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 225 QSQLAFNNINVISTNDMLNRNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 284

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G  ++  R   +  L+S  F
Sbjct: 285 MGTSNKTKRFTETNKLMSYAF 305


>gi|206970894|ref|ZP_03231846.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|229109442|ref|ZP_04239036.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock1-15]
 gi|229178383|ref|ZP_04305752.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 172560W]
 gi|206734530|gb|EDZ51700.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|228605113|gb|EEK62565.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 172560W]
 gi|228674009|gb|EEL29259.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock1-15]
          Length = 317

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|171777393|ref|ZP_02919182.1| hypothetical protein STRINF_00009 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283273|gb|EDT48697.1| hypothetical protein STRINF_00009 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 410

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 136/365 (37%), Gaps = 32/365 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++   ++A+ +        +         +   ++ +TG V+ E     P   AS+TK+
Sbjct: 1   MKKVFAVLALLLAFIGNKVAADDTFNVAAKHAIAVEASTGKVLYEKDATTPDGIASMTKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA--- 116
           +T Y+ +  + +      T + IS  A +   ++               +L+        
Sbjct: 61  LTVYLTYKEIDKGNLSWDTKVPISDYAYDLTANSDASNVPMEAREYTVEQLVNAAMVASA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HG 162
           N  A+A+AE +  TE KFV  M    +  G++     NA G+                  
Sbjct: 121 NSAAIALAEKIGGTESKFVDMMQTQLQEWGINDAKLFNASGLNNSYLGDNIYPGSSSTDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +ARD+AI++  + T++P  +        + +G      N+ +        G DG+KT
Sbjct: 181 NTLSARDVAIIAQHLITEYPDVLKISNQTTADFEGSTMNTYNYMLKGMPYERDGVDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKIN 274
           G T  +G + VA++ +    +I+V++ A         R + + +LL     N      ++
Sbjct: 241 GTTELAGASFVATSTENGMRIISVVMNADGWQENEFARFEATNALLDYVKSNYEMTTLVD 300

Query: 275 YII-----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                   K          VP ++ +        I  +  +K +   + +     K   +
Sbjct: 301 AGESTKNSKAKVIDGKEKTVPAVASQELKVV-HRIGTDASVKFSTKIKGYEATINKGDKV 359

Query: 330 KNKIT 334
            + I 
Sbjct: 360 GSFIY 364


>gi|206977452|ref|ZP_03238347.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|206744302|gb|EDZ55714.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
          Length = 317

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 130/265 (49%), Gaps = 12/265 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++  + P   I          ++D + G +I ++  +  + PAS++K+MTAY++   +  
Sbjct: 49  LVEKVVPPKYIPREIDAKAAMIIDASNGDIIYQHNENEAFAPASMSKMMTAYLLLENVHN 108

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K     P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+E
Sbjct: 109 GKVRWEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSE 168

Query: 132 KKFVQHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
           K FVQ MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +  
Sbjct: 169 KDFVQLMNAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVANLAYHLIKDYPEILEV 228

Query: 188 FQIKGLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             ++  ++              N N       G DG+KTGFT ++G+    +A QGD  +
Sbjct: 229 THLRQSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRI 288

Query: 240 IAVILGALDRNTRNKVSASLLSMGF 264
           I V++G   +  R   +  L+S  F
Sbjct: 289 ITVVMGTKGKTKRFTETNKLMSYAF 313


>gi|229096494|ref|ZP_04227465.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-29]
 gi|229115468|ref|ZP_04244874.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228667881|gb|EEL23317.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228686700|gb|EEL40607.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 317

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPSKYIPPKVDAKAAMIIDASNGDVIYQHNENEAFAPASMSKMMTAYLLLESVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S+ A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSEKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLEMSEHAKFANASGLQEPDGSETKMTAADVAKLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYTF 313


>gi|153813187|ref|ZP_01965855.1| hypothetical protein RUMOBE_03603 [Ruminococcus obeum ATCC 29174]
 gi|149830718|gb|EDM85809.1| hypothetical protein RUMOBE_03603 [Ruminococcus obeum ATCC 29174]
          Length = 441

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 112/269 (41%), Gaps = 12/269 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + S+       A         L+D +TG V+ +   D    PAS TK+MT  V       
Sbjct: 38  VASDSIAGWPAAPAVTSETAVLIDADTGAVLYDKGMDEYRYPASTTKIMTMLVAIENSSP 97

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
           K  +  T   I      +  SN   + G TMT+ +      +KSAN++   IAE++  TE
Sbjct: 98  KDIVTFTETGI--RDVTWDSSNINAQLGETMTMKDCWMAAYIKSANEVCAQIAETVGGTE 155

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHYFQ 189
             FV+ MN  +K LG + THF NA G+    HY++A D+A +      +  F Q M    
Sbjct: 156 ANFVEMMNQKAKELGCTHTHFANASGLPDENHYSSAHDLAKIMRACLRNKRFRQVMKCSN 215

Query: 190 IKGLEIKGKKYPNTNWAVG--------TFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
            K       +    +  +          +    G KTGF+  +   +V +A +  ++ IA
Sbjct: 216 YKIPATNLSEARVMHTHMPLMAKESNLYYADCIGGKTGFSTDAQHTLVTAAERNGRTYIA 275

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDR 270
           V + A D       S SL +  F N    
Sbjct: 276 VTMRAADLGINCTDSTSLFNYAFDNFDTI 304


>gi|255994530|ref|ZP_05427665.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saphenum ATCC
           49989]
 gi|255993243|gb|EEU03332.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saphenum ATCC
           49989]
          Length = 447

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 131/346 (37%), Gaps = 31/346 (8%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
                   + ++          + D +TG VI +   D    PAS TK+MTA +      
Sbjct: 23  FFTFTQKGYTAMTPAADANAVLVADCDTGEVIYQRNADKSVAPASTTKIMTALLTIEN-- 80

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   + +   A+E        + G  M + + L  L++ SA+D A+ +A ++  +
Sbjct: 81  ---VNLQKVVEV-PQAAEGLKDGINLRTGEKMRIIDLLHGLLIASADDTAIVLAYAVSGS 136

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
            +KF + MN  +K LG   T F N +G+ + GH +TA D+ I+S     +        ++
Sbjct: 137 VEKFAEKMNQKAKELGCKNTTFKNPNGIDEAGHQSTAYDLFIMSNEFMKNKLMRKIVTKL 196

Query: 191 KG-----LEIKGKKYPNTNW---------------AVGTFLGADGMKTGFTCASGFNIVA 230
           +       +   +   N N                    + GA G+KTG T  +G  +++
Sbjct: 197 QYTIPATNKSGVRVLQNHNRLLFDTNHNVEVFGQLRPAYYEGALGLKTGDTVNAGACLIS 256

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
            A +    + +V++G   +  R   S   L   F     +K +    K    + L  E  
Sbjct: 257 MAKRHGVEVCSVVMGT-SKKQRFAASIETLDHAFEKYALKKIVKKGEKVAKLKVLQGESD 315

Query: 291 NISEEVCTTQK----EIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +  +V  ++     +        K+   K++     +  T +   
Sbjct: 316 KVDIKVKGSKAIWSLKNAKKLGIYKKVVLKKAITAPVKAGTKVGKL 361


>gi|284029293|ref|YP_003379224.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Kribbella
           flavida DSM 17836]
 gi|283808586|gb|ADB30425.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Kribbella
           flavida DSM 17836]
          Length = 380

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/296 (18%), Positives = 102/296 (34%), Gaps = 11/296 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           S +    +         Y + D  TG V+A   P     PAS  K +TA V+       +
Sbjct: 41  STVVAAGATPPAVHASAYVVADIGTGAVLAAKAPHAKLRPASTLKTLTALVLLP-----R 95

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 +  +   +    S      G   ++D   + + + S ND   A+ +        
Sbjct: 96  LNKKDVVVGTNQDAGIVGSKVGVYPGLRYSVDLLFEGMFLASGNDAVNALVQHDEGGTAG 155

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQ 189
            VQ MN  + +LG   TH  +  G+   G  ++A D+A+ +                Y  
Sbjct: 156 TVQRMNKLAADLGALDTHVTDPTGLDADGQVSSAYDLALFARAGLARRDFAKYAATKYTN 215

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
               E    +  N N  +  + GA G+KTG+T  +    + +A +   +L+  +L +   
Sbjct: 216 FPLAESGTYQVANQNKLLFNYDGALGVKTGYTTLARNTFIGAARRNGHTLVVTMLNSP-- 273

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
           +     +  LL   F N +    +  + +    +  S    +    V         
Sbjct: 274 HGVTGDATELLDWAFRNYSTLTPVGTLARPTAAEETSGRNTSKKGPVAPPLPNRSR 329


>gi|229102587|ref|ZP_04233291.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228680814|gb|EEL34987.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 317

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G VI ++  +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPSKYIPPKVDAKAAMIIDASNGDVIYQHNENEAFAPASMSKMMTAYLLLESVHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S+ A++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 113 WEDPVKMSEKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKTEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMNAKAKQLEMSEHAKFANASGLQEPDGSETKMTAADVAKLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNVNVISTNDMLNKNNKSLYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYTF 313


>gi|325695651|gb|EGD37551.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK150]
          Length = 422

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 132/375 (35%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTANKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYSLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +      N                  S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGETYNKSNSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|228907701|ref|ZP_04071557.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           IBL 200]
 gi|228851934|gb|EEM96732.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           IBL 200]
          Length = 309

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 45  AVPPKYIPPKIDAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 104

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+++    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 105 WEDPVKMSVKAAQTEGARIPVQVNDTLTVNDLYHALMIESANNSAVALAEHMAKTEKDFV 164

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 165 QLMNAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 224

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 225 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 284

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 285 MGTSSKTKRFTETNKLMSYAF 305


>gi|862471|gb|AAC36937.1| ORF4 [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 255

 Score =  148 bits (374), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 14/251 (5%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFN 227
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSGAGFN 244

Query: 228 IVASAIQGDQS 238
           ++ASA+ G + 
Sbjct: 245 LIASAVDGQRR 255


>gi|228952354|ref|ZP_04114442.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807350|gb|EEM53881.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 317

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|254469200|ref|ZP_05082605.1| D-alanyl-D-alanine carboxypeptidase, putative [Pseudovibrio sp.
           JE062]
 gi|211961035|gb|EEA96230.1| D-alanyl-D-alanine carboxypeptidase, putative [Pseudovibrio sp.
           JE062]
          Length = 372

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 68/331 (20%), Positives = 117/331 (35%), Gaps = 8/331 (2%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           MA  S +    + A   K    TL D     ++          PA+LTKLMTA  V   +
Sbjct: 1   MAFCSILAASPAQAVEIKAKAATLYDFTNKSLVFSKNSQVLMAPANLTKLMTAVTVQQAI 60

Query: 70  KEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                   T   +S++A          +    +  S++++++ +  LIV SAND A+ +A
Sbjct: 61  HAGDITPQTMFKVSEHAWRTGGAPARVTTMFARLNSSVSVNDLMYGLIVHSANDAAIILA 120

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E L  +E+ F Q MN  +K++G+  ++F N  G     H TT  D+ +L+  +    P+ 
Sbjct: 121 EGLAGSEENFAQEMNKLAKSIGMENSNFTNPTGFPDENHKTTLEDLTVLAAYVLEHEPEL 180

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              + +           N N  +    G DG   GF+   GF  + +        +A I 
Sbjct: 181 HSVYAMDRFTWNKITQRNKNPLIRDIQGLDGFGAGFSEREGFAALGTLDSNGHRYVAAIA 240

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISEEVCTTQK 301
            +     R +   +LL   F     ++                    V   + +   T  
Sbjct: 241 ASPTLQDRVQDMKTLLLPTFSGLKLQQLFRKGELISDAQVYGGKKTTVSLKTNDAVATLI 300

Query: 302 EIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +                EK   +   
Sbjct: 301 NPNEKDKYKLRVVYNGPIPAPIEKGMEVGEL 331


>gi|257886898|ref|ZP_05666551.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,141,733]
 gi|257822952|gb|EEV49884.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,141,733]
          Length = 435

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 123/350 (35%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L ++                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPSVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSVTPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +A L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETARLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|260588887|ref|ZP_05854800.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|260540666|gb|EEX21235.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
          Length = 478

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 71/335 (21%), Positives = 135/335 (40%), Gaps = 25/335 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK- 72
           SN  P              ++D +T  ++     D    PAS TK++TA +    +  + 
Sbjct: 59  SNNIPGWPEGPKVMAETAIVMDMDTEEILYAKGIDEKRAPASTTKILTAMLAIEKVPFET 118

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +   T  +   +  S +         G T+T+ +    +++ SAN+++  +AE +  T  
Sbjct: 119 QITFTDEVNNIEAGSTHIGIK----PGETLTMKDCAYAILLASANEVSSGVAEYIGTTVP 174

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF------PQYMH 186
            FV  MN  +K LG + THF+NA+G+    HYTTARD+AI++     +           +
Sbjct: 175 AFVDMMNQRAKELGCTNTHFVNANGLYDENHYTTARDLAIIAKAAFQNETFREVVKTPYY 234

Query: 187 YFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                 +  + +   N +         + G  G KTG+T  +G  +V  A +  + L+  
Sbjct: 235 IVPKTNITDEERWLNNHHKMILQGSEYYEGCLGGKTGYTEKAGNTLVTYAERNGRKLVCA 294

Query: 243 ILGALDRNTRNKVSASLLSMGFYNK----------TDRKKINYIIKDFYQQNLSNEVPNI 292
           +L  ++   +   + +LL  GF +           +  K      +   +  LS  +   
Sbjct: 295 LLADVNVVAQYTDTKALLDYGFNSFQRLDTTAVSLSPAKSDKLGKQLEEKGLLSTALETT 354

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           S  V     E + Y T ++       ++   ++I 
Sbjct: 355 SISVPKELTEELTYKTTLENNMLNIDYYYGKQQIG 389


>gi|77405145|ref|ZP_00782244.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae H36B]
 gi|77176288|gb|EAO79058.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae H36B]
          Length = 414

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 142/360 (39%), Gaps = 30/360 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +    I+ ++ +  +    + +      +   +D ++G ++ E   + P   ASLTK+MT
Sbjct: 6   KIITSILLLSCIFFMPTISAESFNASAKHALAVDLDSGKILYEKDANKPAAIASLTKIMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            Y+V+  +        T + I     +      +++   +    T+   +   ++ SAN 
Sbjct: 66  VYMVYKEIDNGNLKWNTKVNIXDYPYQLTRESDASNVPLEKRRYTVKQLVDAAMISSANS 125

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHY 164
            A+A+AE +  TE KFV  M    +  G+  +H +NA G+                  + 
Sbjct: 126 AAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDENK 185

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMKTGF 220
            +ARD+AI+++ +  ++P  +        +       + N+ +        G  G+KTG 
Sbjct: 186 MSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKTGT 245

Query: 221 TCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           T  +G + +A++ +    L+ VI+ A     D+  R   + SLL+           +   
Sbjct: 246 TELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLAKG 305

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                 +     V +  E+      +      Q K    +    I+F+K   L   ITKK
Sbjct: 306 AA---YKGKEASVRDGKEQSVIAVAKNDLKVVQKKNITKQNQLKINFKK--ELTAPITKK 360


>gi|302386883|ref|YP_003822705.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
 gi|302197511|gb|ADL05082.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
          Length = 431

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 20/261 (7%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P        +     L+D +TG ++     D  + PAS+TKLMTA +V          L 
Sbjct: 84  PSGITQPEIQSEGAVLMDASTGTLLYSKNGDTRYYPASITKLMTALLVAEKC-----SLP 138

Query: 78  TPITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             +T SK      E         +G  +T++  L  L++KSAN++A  +AE +  +   F
Sbjct: 139 DTVTFSKAATTNLESGAVTLGLSEGDKLTVEQCLYGLMLKSANEVANGLAEHVSGSISAF 198

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY-------MHY 187
              MN  +K LG + T+F+N +G+   GHYTTA DMA+++     +              
Sbjct: 199 SALMNVRAKELGCTGTNFVNPNGLNSSGHYTTAHDMALIARAAFQNETVKKVTSTLSYQI 258

Query: 188 FQIKGLEIKGKKYPNTNWAVG---TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              K    +     +     G    + G  G KTG+T  +G  +V    +    LIAVI+
Sbjct: 259 PATKNASARTVSMGHKMLYPGDSRYYPGVIGGKTGYTSLAGNTLVTCVEKNGIRLIAVIM 318

Query: 245 GALDRNTRNKVSASLLSMGFY 265
               ++T    + SLL  GF 
Sbjct: 319 --KSKSTHYADTKSLLDYGFA 337


>gi|293571656|ref|ZP_06682677.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E980]
 gi|291608326|gb|EFF37627.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E980]
          Length = 435

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSVTPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KIAGSEAKFTERMKEQLKDWGIKDAMIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +A L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETARLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|325689091|gb|EGD31099.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK115]
          Length = 422

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 129/375 (34%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  +   + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCFLVLVGLTASKVAADDYNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ SAN
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G+     +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETDYTASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TAKKSKDTENKFSAYDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSEKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +                         S++    ++       +++ +  ++  
Sbjct: 301 NFTQTTIVAEGEAYNKSHSTVIDGKQKAVPAVASKDFTIIERIANQAEHKVEFSTKEQGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|331083423|ref|ZP_08332535.1| hypothetical protein HMPREF0992_01459 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330404116|gb|EGG83664.1| hypothetical protein HMPREF0992_01459 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 478

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/335 (21%), Positives = 135/335 (40%), Gaps = 25/335 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK- 72
           SN  P              ++D +T  ++     D    PAS TK++TA +    +  + 
Sbjct: 59  SNNIPGWPEGPKVMAETAIVMDMDTEEILYAKGIDEKRAPASTTKILTAMLAIEKVPFET 118

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +   T  +   +  S +         G T+T+ +    +++ SAN+++  +AE +  T  
Sbjct: 119 QITFTDEVNNIEAGSTHIGIK----PGETLTMKDCAYAILLASANEVSSGVAEYIGTTVP 174

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF------PQYMH 186
            FV  MN  +K LG + THF+NA+G+    HYTTARD+AI++     +           +
Sbjct: 175 AFVDMMNQRAKELGCTNTHFVNANGLYDENHYTTARDLAIIAKAAFQNETFREVVKTPYY 234

Query: 187 YFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                 +  + +   N +         + G  G KTG+T  +G  +V  A +  + L+  
Sbjct: 235 IVPKTNITDEERWLNNHHKMILQGSEYYEGCLGGKTGYTEKAGNTLVTYAERNGRKLVCA 294

Query: 243 ILGALDRNTRNKVSASLLSMGFYNK----------TDRKKINYIIKDFYQQNLSNEVPNI 292
           +L  ++   +   + +LL  GF +           +  K      +   +  LS  +   
Sbjct: 295 LLADVNVVAQYTDTKALLDYGFDSFQRLDTTAVSLSPAKSDKLGKQLEEKGLLSTALETT 354

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           S  V     E + Y T ++       ++   ++I 
Sbjct: 355 SISVPKELTEELTYKTTLENNMLNIDYYYGKQQIG 389


>gi|328947304|ref|YP_004364641.1| serine-type D-Ala-D-Ala carboxypeptidase [Treponema succinifaciens
           DSM 2489]
 gi|328447628|gb|AEB13344.1| Serine-type D-Ala-D-Ala carboxypeptidase [Treponema succinifaciens
           DSM 2489]
          Length = 479

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 77/358 (21%), Positives = 129/358 (36%), Gaps = 37/358 (10%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            +    F ++            ++D  TG+++ E   D    PAS+TKL+  YVVF  ++
Sbjct: 82  IVSELPFQYVPADLFVNAESAIVVDFATGNILFEKNADVQIPPASMTKLVEMYVVFEAVE 141

Query: 71  EKKAMLTTPITISKNASEYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             +  L   + +   +      +        +   +TL   L  L + S ND ++A+A+ 
Sbjct: 142 NGEISLDDVVPLPPESWARNLPSDASIMFLDERQKVTLRELLLGLAIASGNDASIAVAKY 201

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YM 185
           +C     FV+ MN T K +GL  T F+ + G     + TTA++ A    +    FP    
Sbjct: 202 VCGNMDSFVERMNQTVKKMGLVKTEFVESSG-YSEKNITTAKEFAAFCRKYIERFPFAIT 260

Query: 186 HYFQIKGLEIKGKK-----------------YPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            +   K L     K                   NTN  +G+  G DG+KTGF   SGFN+
Sbjct: 261 EFHSQKVLRYPLAKNLPRESAQKNGDSQAVIQYNTNKLLGSLDGCDGLKTGFIYESGFNL 320

Query: 229 VASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             +A +     I+V +      +      R K   +L+   F   +              
Sbjct: 321 ALTAERNGVRYISVTMKGPGIGSAQGNIYRVKDGTNLMEYAFSKFSPYIAKQPHNFSVGV 380

Query: 283 QN--------LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                     +  +  N S    +              A   +S F +FE+ T     
Sbjct: 381 AGSSLKSVCLVPAKSENFSVPFISGVSPKEAAQKIHVTANIPKSIFGEFEEGTQFGTL 438


>gi|257890484|ref|ZP_05670137.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,410]
 gi|260558933|ref|ZP_05831120.1| predicted protein [Enterococcus faecium C68]
 gi|293559772|ref|ZP_06676292.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1162]
 gi|314950187|ref|ZP_07853472.1| beta-lactamase [Enterococcus faecium TX0082]
 gi|257826844|gb|EEV53470.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,410]
 gi|260075041|gb|EEW63356.1| predicted protein [Enterococcus faecium C68]
 gi|291606255|gb|EFF35669.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1162]
 gi|313643497|gb|EFS08077.1| beta-lactamase [Enterococcus faecium TX0082]
          Length = 435

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSVTPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +A L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETARLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|288871299|ref|ZP_06117136.2| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288863963|gb|EFC96261.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 465

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 107/259 (41%), Gaps = 20/259 (7%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  +     L+D  TG+++     +  + PAS+TKLMTA +V          L   
Sbjct: 104 TVKQPEIQAQGAVLMDAATGNLLYSKNAETKYYPASITKLMTALLVAEKC-----SLDDT 158

Query: 80  ITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +T SK      E         +G  +T+   L  L++KSAN++A  +AE    +   F  
Sbjct: 159 VTFSKTAVTNLESGAVTLGLVEGDKLTVRQCLYGLLLKSANEVANGLAEHTAGSISAFAD 218

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-------YMHYFQ 189
            MN  +K LG + T+F+N +G+    HYTT  DMA+++     +                
Sbjct: 219 MMNARAKELGCTNTNFVNPNGLNDSNHYTTPHDMALIARAAFQNATVCKVASTLSYQIPA 278

Query: 190 IKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            +    +     +          + G  G KTG+T  +G  +V  A +    LIAVI+ +
Sbjct: 279 TQKAAARTISLGHKMLYPNDSRYYQGVIGGKTGYTSLAGNTLVTCAERDGVRLIAVIMKS 338

Query: 247 LDRNTRNKVSASLLSMGFY 265
                    +++LL  GF 
Sbjct: 339 KSTQ--YTDTSALLDYGFA 355


>gi|229079157|ref|ZP_04211706.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228704174|gb|EEL56611.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock4-2]
          Length = 317

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFENASGLQEPDGSETKMTAGDVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 293 MGTSSKTKRFTETNKLMSYAF 313


>gi|227551939|ref|ZP_03981988.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecium
           TX1330]
 gi|257895469|ref|ZP_05675122.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium Com12]
 gi|293378334|ref|ZP_06624503.1| beta-lactamase [Enterococcus faecium PC4.1]
 gi|227178940|gb|EEI59912.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecium
           TX1330]
 gi|257832034|gb|EEV58455.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium Com12]
 gi|292643198|gb|EFF61339.1| beta-lactamase [Enterococcus faecium PC4.1]
          Length = 435

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSVTPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +A L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETARLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|225403123|ref|ZP_03760420.1| hypothetical protein CLOSTASPAR_04451 [Clostridium asparagiforme
           DSM 15981]
 gi|225043241|gb|EEG53487.1| hypothetical protein CLOSTASPAR_04451 [Clostridium asparagiforme
           DSM 15981]
          Length = 492

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/359 (19%), Positives = 130/359 (36%), Gaps = 44/359 (12%)

Query: 2   RQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           R+   II + + + +           P              ++D ++G V+       P+
Sbjct: 3   RKIKRIICLILAAAMSAAASFSAFARPEWPSDTGIMAEAGIVMDQDSGAVLFGQNIHLPF 62

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISK----NASEYPPSNSTFKKGSTMTLDNA 107
            PAS+TKL+TA VV    K     L   +T S+    +      +    + G  +++++ 
Sbjct: 63  APASITKLLTALVVIENSK-----LDDMVTFSQSAVYDVESGSGNKLHMETGDELSVEDC 117

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L +L++ S+N  A A+AE +  + + FV+ MN+  K +G + +HF N  G+     Y +A
Sbjct: 118 LYMLLLLSSNQAANALAEHVAGSREAFVEMMNDRIKEIGCTESHFANPSGLNDDNQYVSA 177

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN---TNWAV-----------GTFLGA 213
            DMA+++     +                    PN    N                  G 
Sbjct: 178 YDMALIAREAFNNETLLKIDSSKSYSIGATANNPNGASFNMEHRLIMAEDTSSQYYCEGT 237

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
              KTG+T  +G  +V    +  + LIAV+L    +      S SLL  GF N  +    
Sbjct: 238 MAGKTGYTSIAGNTLVTLTERDGRRLIAVVLKG-TQPQYYLDSKSLLEFGFANFDNINIA 296

Query: 274 N------YIIKDFYQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFID 322
                             S E  ++  +    +   +    +   +    +  + H   
Sbjct: 297 EHETAYTTGEGPVQVGAKSYEPSDLYLDSVAVITVPKGAAFSDADRDLVTELPKDHPKG 355


>gi|293568621|ref|ZP_06679936.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1071]
 gi|291588581|gb|EFF20414.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1071]
          Length = 435

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSVTPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +A L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETARLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|227873312|ref|ZP_03991575.1| D-alanyl-D-alanine carboxypeptidase [Oribacterium sinus F0268]
 gi|227840841|gb|EEJ51208.1| D-alanyl-D-alanine carboxypeptidase [Oribacterium sinus F0268]
          Length = 525

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 24/293 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           + V++   + S +F   ++A+T        +     L+D  +  ++     +  + PAS+
Sbjct: 19  YFVLLFSMLFSFVFSQQALADTWPTCVDQIEADGALLMDAKSSTILYAKNENTHYFPASI 78

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK++TA VV   ++  +  +T     ++   E   +      G  +++ + L  L++ SA
Sbjct: 79  TKVLTAIVVLEHVENLEEKVTFSQEATRGNLENNSTVIAASPGDKLSVRDCLYSLLLHSA 138

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A A+AE +  + +KF + MN  +  +G + +HF N  G+    HYT+A DMA +   
Sbjct: 139 NDCANALAEHVAGSNEKFAELMNQKAAEIGCTNSHFTNPSGLNNPEHYTSALDMAKIMQY 198

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG---------------TFLGADGMKTGFT 221
             ++                  KYP+ N                    + G    KTG+T
Sbjct: 199 AISNPTFCQIDATQVYTHGPLIKYPDPNAPENTIYAHHKMMKKSNKEYYSGVFAGKTGYT 258

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
             +G  +V +  +GD +LI VIL   +   R   S  L   GF N       N
Sbjct: 259 LLAGNTLVTACKRGDTTLICVILNGHNSQYR--DSKKLFDFGFANFNSYPAEN 309


>gi|324996133|gb|EGC28044.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK678]
          Length = 422

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/375 (17%), Positives = 132/375 (35%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + + + +        +            +D  +G ++ E   + P    S+T L+
Sbjct: 1   MKRLFLCLLVLVGMTTSKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ S+N
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G++    +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGITDATVVNSTGLNTLLLEYATEETEYSTSAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TAKKSKDTENKFSAYDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSDKGGSSFVATTTENGIRMITVVLDVDQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +                         S++    ++       +++ + +++  
Sbjct: 301 NFTQTTIVAEGEAYNKSHSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|167767426|ref|ZP_02439479.1| hypothetical protein CLOSS21_01945 [Clostridium sp. SS2/1]
 gi|167711401|gb|EDS21980.1| hypothetical protein CLOSS21_01945 [Clostridium sp. SS2/1]
 gi|291559258|emb|CBL38058.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SSC/2]
          Length = 383

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 72/356 (20%), Positives = 142/356 (39%), Gaps = 26/356 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M+  + +    ++ +I  +   AE          ++D  +G ++ E   D     AS TK
Sbjct: 1   MKTIVSVFLYVIICSIQIYAVSAEEINLNAKAAVIMDAESGKILYEKSKDQKMPNASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++T   +          L     +SKNA+  P      ++G    + + L  L+++S ND
Sbjct: 61  ILTCLYILKHCD-----LDQMAEVSKNAAMQPKVRLGVREGEKYKVKDLLYGLMLESYND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILS 174
            AV +AE    + + F + MN  ++NLG   THF+  +G+        H TTA+D+A + 
Sbjct: 116 CAVVLAEHAEGSVENFEKRMNQMAENLGTLNTHFVTPNGLDGIDKKGRHETTAQDLAKIM 175

Query: 175 WRIKTDFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            R   +  Q++   Q K          +     N N  + +  G    KTG+T  +G+  
Sbjct: 176 ARCIKN-QQFLEITQTKQYTFTDGSRKRRFICNNHNALLSSMQGVISGKTGYTSKAGYCY 234

Query: 229 VASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQ 282
           V +  Q + ++   +L +     +  + K    L+     +   R+ I   + I +   +
Sbjct: 235 VGAVKQKNMTMTFSVLASGWPPHKTYKWKDVRKLVQYATDHYERREIIADTSKIKEISIK 294

Query: 283 QNLSNEVPNISEEVCT--TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             L  +V   +  +      K+      +       ++   + +K+  +K  I  K
Sbjct: 295 NGLKEKVLLKTGNLKAAFLVKKTDKIKIESILPSFIDAPVKEGQKVGEIKYLINGK 350


>gi|225389445|ref|ZP_03759169.1| hypothetical protein CLOSTASPAR_03193 [Clostridium asparagiforme
           DSM 15981]
 gi|225044492|gb|EEG54738.1| hypothetical protein CLOSTASPAR_03193 [Clostridium asparagiforme
           DSM 15981]
          Length = 448

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 102/279 (36%), Gaps = 26/279 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P              L D  TG V+     D     AS TK+MT  +             
Sbjct: 57  PAQPDPLKLNAQSAVLADGLTGRVLYGKGEDTIRPMASTTKIMTCILALE-----LGNPD 111

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +T +K A+  P  +   + G T  L + L  L+++S ND AV IAE +  +   F + 
Sbjct: 112 DVVTATKEAAGQPKVHLGVQSGQTFYLKDLLYSLMLESHNDAAVMIAEHIGGSVPGFARL 171

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHG---------HYTTARDMAILSWRIKT---DFPQYM 185
           MN  +K LG   T+F+  +G+             H TTA D+A +            +++
Sbjct: 172 MNEKAKALGCENTYFITPNGLDAKETDEAGVEHVHSTTAADLARIMAYCVNLSPKRQEFL 231

Query: 186 HYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
              Q +                N N  +    G    KTGFT  +G++ VA+  +  +  
Sbjct: 232 EITQTQNYFFTDVPGKHSYNCTNHNAFLTMMDGVVSGKTGFTGGAGYSYVAAMEKDGRPY 291

Query: 240 IAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +  +LG      +  +   +  L + G  +   +     
Sbjct: 292 VIALLGCGWPPHKTWKWADARKLFNFGLEHYQMKDVYEE 330


>gi|152975284|ref|YP_001374801.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024036|gb|ABS21806.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 339

 Score =  148 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 12/260 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     ++D + G VI +N  +  + PAS++K+MTAY++   + + K      + IS
Sbjct: 70  PVVEAKAAIIIDASDGEVIYQNNENETFAPASMSKMMTAYLLLENIHKGKVHWEDQVKIS 129

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             +++   +    +    +T+ +    L+++SAN+ AVA+AE + KTEK FVQ MN  +K
Sbjct: 130 AKSAQTEGAKIPLQMNDVVTVKDLFHALMIQSANNAAVALAEHMAKTEKNFVQIMNQKAK 189

Query: 144 NLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
           +L LS  T F NA G+           A D+A L++ +  ++P+ +    ++  ++  K 
Sbjct: 190 DLELSNKTKFANASGLQEPDGSETKMPAADVAKLAYHLIKEYPEILEVTHLRRSQLAFKN 249

Query: 200 YP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     NT        G DG+KTGFT ++G+    +A QGD+ +I V++G   +  
Sbjct: 250 ISVTSTNEMLNTANKNLHIEGMDGLKTGFTDSAGYCFTGTAKQGDKRIITVVMGTKSQTK 309

Query: 252 RNKVSASLLSMGFYNKTDRK 271
           R   +  L+S GF    +RK
Sbjct: 310 RFTETHKLMSYGFEFVNERK 329


>gi|212638873|ref|YP_002315393.1| D-alanyl-D-alanine carboxypeptidase [Anoxybacillus flavithermus
           WK1]
 gi|212560353|gb|ACJ33408.1| D-alanyl-D-alanine carboxypeptidase [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 15/296 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L++  TG V+ E         AS+TK+MTA +     K ++      +T+S+
Sbjct: 2   SVSAKSAILMEQTTGRVLFEKDAHTKRRIASITKIMTAILAIESGKWEEL-----VTVSE 56

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S+   K G  + L + +  L+++S ND AVAIAE +  + + FV  MN  +  
Sbjct: 57  RAVRTEGSSIYLKPGEKIALKHLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNKKAAE 116

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----- 199
           +G++ T F N HG+    ++ +      L  R      Q+      K             
Sbjct: 117 IGMTNTEFANPHGLDDAENHYSTAYDMALLMRYAMQNEQFREVSGTKLYRAPNPTEDWDR 176

Query: 200 -YPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + N N  +   +    G KTG+T  +   +V +A +    LIAV + A D         
Sbjct: 177 IWRNKNKLLTHLYKYCTGGKTGYTKRAKRTLVTTASKDGLDLIAVTIDAGDD---WNDHM 233

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           ++   GF +          I +  Q    ++   +  +      +      +++  
Sbjct: 234 AMYEHGFAHYELVTVKADEIVEQIQDPFYDKRLFVVRDFIYPVTKKEEALIRLERK 289


>gi|317496761|ref|ZP_07955091.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895773|gb|EFV17925.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 383

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 143/356 (40%), Gaps = 26/356 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M+  + +    ++ +I  +   AE          ++D  +G ++ E   D     AS TK
Sbjct: 1   MKTIVSVFLYVIICSIQIYAVSAEEINLNAKAAVIMDAESGKILYEKSKDQKMPNASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++T   +          L     +SKNA+  P      ++G    + + L  L+++S ND
Sbjct: 61  ILTCLYILKHCD-----LDQMAEVSKNAAMQPKVRLGVREGEKYKVKDLLYGLMLESYND 115

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILS 174
            AV +AE    + +KF + MN  ++NLG   THF+  +G+        H TTA+D+A + 
Sbjct: 116 CAVVLAEHAEGSVEKFEKRMNQMAENLGTLNTHFVTPNGLDGIDKKGRHETTAQDLAKIM 175

Query: 175 WRIKTDFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            R   +  Q++   Q K          +     N N  + +  G    KTG+T  +G+  
Sbjct: 176 ARCIKN-QQFLEITQTKQYTFTDGSRKRRFICNNHNALLSSMQGVISGKTGYTSKAGYCY 234

Query: 229 VASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQ 282
           V +  Q + ++   +L +     +  + K    L+     +   R+ I   + I +   +
Sbjct: 235 VGAVKQKNMTMTFSVLASGWPPHKTYKWKDVRKLVQYATDHYERREIIADTSKIKEISIK 294

Query: 283 QNLSNEVPNISEEVCT--TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             L  +V   +  +      K+      +       ++   + +K+  +K  I  K
Sbjct: 295 NGLKEKVLLKTGNLKAAFLVKKTDKIKIESILPSFIDAPVKEGQKVGEIKYLINGK 350


>gi|46202335|ref|ZP_00208483.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 404

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 93/257 (36%), Positives = 140/257 (54%), Gaps = 3/257 (1%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +A+   +   +  AE         +D  +G VIAE+    P +PASLTK+MTAYV F  
Sbjct: 1   MLALGLALPTGMVRAEP---SASLAVDLGSGTVIAESRGGMPHHPASLTKMMTAYVAFGA 57

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +K  K      IT+S+ A+    +      G  ++L  ALK +IV+SAND AVA+AE + 
Sbjct: 58  IKAGKVSQDDIITVSERAASQGGATLDLGPGERISLGAALKAMIVRSANDAAVAVAEHVA 117

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +E  F   M   +  LG++++ F NA G+   GH ++ RDMAIL+  I+ DFP +   F
Sbjct: 118 GSESAFAVRMTEEAARLGMTSSSFRNATGMTAAGHVSSPRDMAILAMAIERDFPAFRPMF 177

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             +    KG+  P  N  +G + GA+GMKTGFTC++G+N+VA A +G +  +AV++GA  
Sbjct: 178 SSRDTTWKGRVLPTVNGFLGAYAGAEGMKTGFTCSAGYNLVAIAHRGGRRALAVVMGAGS 237

Query: 249 RNTRNKVSASLLSMGFY 265
              R      L+     
Sbjct: 238 SAERLGAIRRLMDQALQ 254


>gi|167748674|ref|ZP_02420801.1| hypothetical protein ANACAC_03448 [Anaerostipes caccae DSM 14662]
 gi|167651988|gb|EDR96117.1| hypothetical protein ANACAC_03448 [Anaerostipes caccae DSM 14662]
          Length = 374

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 33/300 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENY 46
           ++ LV++  A+L       + A                +       L+D  TG ++    
Sbjct: 6   KRLLVMLTAAVLVTAGTVPAKAAERGLATKEDTNADKPSINGVCGILMDAKTGKILYAKN 65

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMT 103
            D    PAS+TK++T  V           L + +  S++A         +   K G  + 
Sbjct: 66  IDKKSYPASITKILTTLVAIENND----DLYSTVKFSRHAVNSIEPGSTHIGIKAGEEIP 121

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           L + L  ++++SAN+    +AE    + +KF   MN  +K +G   +HFMN +G+    H
Sbjct: 122 LMDVLYGIMLESANEACNGVAEHTSGSIEKFADLMNKKAKEIGCKGSHFMNPNGLHNDKH 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK------YPNTNWA----VGTFLGA 213
           Y TARDMA+++     +                  K        N +      +  + G 
Sbjct: 182 YVTARDMALITKAALQNPMFRKIACSSHYFMSGTNKEKKGRELWNHHKMVKQTMFLYKGV 241

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           +G KTG+T  +G  +V  A +GD  LI+VIL         + +  L   GF N       
Sbjct: 242 EGGKTGYTTRAGGTLVTFAKRGDTELISVILRGNGYEL-YRDTIKLFDYGFKNYKSVAPF 300


>gi|218288835|ref|ZP_03493086.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240924|gb|EED08101.1| Serine-type D-Ala-D-Ala carboxypeptidase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 289

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 12/263 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +   +        +           + D     V+ +   D P  PAS TKLMTA ++ 
Sbjct: 22  AMFAVLAPWAQAEATRPPAVNAKAAVVYDATNRKVLYDKRGDEPMYPASTTKLMTAILLV 81

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                       P+ IS+ AS  P      + G+ +T + AL  LI+KSAND+A  IAE+
Sbjct: 82  QH-----LQPDDPVYISETASRQPRVRLGLRPGTELTAEQALLALIMKSANDVAYGIAET 136

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +++ F + MN  ++ +G + T F+  +G+    H T+A+D+A+++ +  T +P+ + 
Sbjct: 137 IGGSQEGFARMMNVEARLIGCTHTQFVTPNGLHADAHTTSAKDIALITAKAIT-YPRIVR 195

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQ--GDQSLI 240
             Q     I GK   N N  + +         G KTGFT  + + +  +  +      L+
Sbjct: 196 AMQTPQATIAGKTIRNGNRLLYSPPASIGEFIGGKTGFTSRAMYCLATAVRRPSDGHVLV 255

Query: 241 AVILGALDRNTRNKVSASLLSMG 263
           +V+ GA  ++   + +  LL+  
Sbjct: 256 SVVFGAPRKSLMYRETVRLLTWA 278


>gi|323487044|ref|ZP_08092353.1| D-alanyl-D-alanine carboxypeptidase [Clostridium symbiosum
           WAL-14163]
 gi|323399635|gb|EGA92024.1| D-alanyl-D-alanine carboxypeptidase [Clostridium symbiosum
           WAL-14163]
          Length = 486

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 25/265 (9%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                           L D      + E   D  + PAS+TKLMTA +V          L
Sbjct: 91  ASGSLETPVVASQGAVLYDALNNRFLFEQNADTRFYPASITKLMTALLVLERS-----SL 145

Query: 77  TTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
              +T S+N     E        K G   ++ + +  L++KSAN++A  +AE +  +   
Sbjct: 146 DDTVTFSENAVTNLEAGAVTLKIKAGDKFSVKDCMYALLLKSANEVANGLAEHVAGSVSG 205

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-------------TD 180
           F   MN  + +LG + THF+N +G+    HYTTARDMA+++                  D
Sbjct: 206 FADLMNQKAASLGCTNTHFVNPNGLNDSNHYTTARDMALIAKAAFENQTLSQIASTVSYD 265

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FP       ++ L +  K     N     + G  G KTG+T  +G  +V  A +  + LI
Sbjct: 266 FPATASVPTVRKLTMGHKMVNPAN--GEYYQGIVGGKTGYTSLAGNTLVTCAERDGKRLI 323

Query: 241 AVILGALDRNTRNKVSASLLSMGFY 265
           AV+L    + T    + +LL  GF 
Sbjct: 324 AVVL--KSKQTHYTDTKALLDYGFA 346


>gi|116627039|ref|YP_819658.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein
           [Streptococcus thermophilus LMD-9]
 gi|116100316|gb|ABJ65462.1| D,D-carboxypeptidase PBP3. Serine peptidase. MEROPS family S11
           [Streptococcus thermophilus LMD-9]
 gi|312277502|gb|ADQ62159.1| D,D-carboxypeptidase PBP3 [Streptococcus thermophilus ND03]
          Length = 417

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/369 (21%), Positives = 145/369 (39%), Gaps = 35/369 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   II +A++       ++A+           +   ++T TG V+ E     P   A
Sbjct: 3   MKKLQHIIMIALILIGLATPALAQDQTDSFNVAAKHAIAIETTTGKVLYEKDATTPDGVA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 63  SMTKILTAYMVYKAVDQGKITWDTEVGISDYPFNLTVDSEVSNVPLDSRKYTVKQLLDAT 122

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  TE  FV  M    K  G++     NA G+             
Sbjct: 123 LISSANSAAIALAEKISGTESTFVDTMTAQLKEWGITDAKLFNASGLNNKYLGDNRYPGS 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +   ++     K    N+          G
Sbjct: 183 KPDDENTMSALDIAIIADHLIKDYPQVLEITKQTEVDFEGDNKLTTHNYMLEGQENYREG 242

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI V++    G  D + R   +  LL     N  
Sbjct: 243 VDGLKTGTTELAGASFVAHSNENGMSLITVVMNAYNGGDDESARFTATNELLDYVTQNWE 302

Query: 269 DRKK--INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-ESHFIDFEK 325
            +       I+K    +    +   IS  + +    +   N++    K + ++     +K
Sbjct: 303 IKTLNTNGQIVKKNDIKVADGDRKTISARLESDLTVVQKINSRNDSVKIQAKTVTAPIKK 362

Query: 326 ITLLKNKIT 334
              +   I 
Sbjct: 363 GDTIGTAIY 371


>gi|331002378|ref|ZP_08325896.1| hypothetical protein HMPREF0491_00758 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410194|gb|EGG89628.1| hypothetical protein HMPREF0491_00758 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 483

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 23/341 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ + ++ + +  +               L+D ++G V+        + PAS+TK++TA 
Sbjct: 17  FITVFSLPLKALAYVDWPANANILSEGAILMDADSGAVLYGKNIHEHYYPASITKILTAL 76

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +V          L   +T SKNA        S++    G T+T+ + L  ++++SAN+ A
Sbjct: 77  IVVENC-----NLDDIVTFSKNAVYNVEAGSSSAGLDVGDTLTVRDCLYAMLLQSANEAA 131

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE    + ++F   MN  + NLG + +HF+N  G+    HYT+A D A++S     +
Sbjct: 132 NALAEHTAGSIEEFANMMNQKASNLGCTDSHFVNPSGLNSPDHYTSAYDYALISRAAFMN 191

Query: 181 FPQ------YMHYFQIKGLEIKGKKYPNTNWAVG-----TFLGADGMKTGFTCASGFNIV 229
                      +          G+   N +  +       +  A   KTG+T  +G  +V
Sbjct: 192 PIVTEIDSATYYNLPPSKRVPTGQTIYNHHSMLRKTSGNYYQNAICGKTGYTTLAGNTLV 251

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
             A      LI V+L      T    +  LL+ GF N  + K     I   +  N+ + +
Sbjct: 252 TYARNDQIGLITVVLNGN--KTHYTDTQELLNFGFANFKNIKLSTADITTKFSSNI-SMI 308

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           P+ +E +        + +       +     +DFE +  L 
Sbjct: 309 PDFNEYIIEPDDNA-SISLPNNADINDIKSTMDFESVAGLP 348


>gi|229090529|ref|ZP_04221765.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|228692796|gb|EEL46519.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
          Length = 310

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 78/313 (24%), Positives = 126/313 (40%), Gaps = 17/313 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 5   MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 65  TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 120 NDAAQVIAENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 179

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 180 YAMGN-ETFKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 238

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +    LI V L A           +L   GF      K +         +         
Sbjct: 239 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYT 295

Query: 293 SEEVCTTQKEIIN 305
                    E   
Sbjct: 296 KNSFSVPLTEEEK 308


>gi|197303547|ref|ZP_03168586.1| hypothetical protein RUMLAC_02269 [Ruminococcus lactaris ATCC
           29176]
 gi|197297545|gb|EDY32106.1| hypothetical protein RUMLAC_02269 [Ruminococcus lactaris ATCC
           29176]
          Length = 434

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 21/284 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             ++     +         L+D ++G ++ E     P   AS TK+MT  +         
Sbjct: 53  LTVYTDAGESLELYARSAVLMDGDSGRILFEKNGSDPRPMASTTKIMTCILALEASD--- 109

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
              +  IT+S  A+  P  +    +G +  L + L  L+++S ND AVAIAE +  + + 
Sbjct: 110 --PSRKITVSSQAASQPKVHLGMTEGQSFYLKDLLYSLMLESHNDAAVAIAEGIDGSVEA 167

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQH----GHYTTARDMAILSWRIKT---------D 180
           F Q MN  ++ +G   T+F++ +G+        H+TTAR++A++                
Sbjct: 168 FAQRMNQKAEEIGCKNTYFISPNGLDAQDSQSNHHTTARELALILRYCIMVSPQREAFLK 227

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             + M Y      +       N N  +    GA   KTGFT  +G+  V +  + D++ I
Sbjct: 228 ITRTMQYTFQDCEKNFSYSCNNHNAFLNMMEGALTGKTGFTADAGYCYVGALQRDDRTFI 287

Query: 241 AVILGALDRNTR---NKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +L     N R      +  L++ G  N   R         F 
Sbjct: 288 VALLACGWPNNRNYKWMDTKKLMTYGLENYVYRDFQVKAAPHFV 331


>gi|167746445|ref|ZP_02418572.1| hypothetical protein ANACAC_01155 [Anaerostipes caccae DSM 14662]
 gi|167653405|gb|EDR97534.1| hypothetical protein ANACAC_01155 [Anaerostipes caccae DSM 14662]
          Length = 383

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/358 (18%), Positives = 143/358 (39%), Gaps = 28/358 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++   +I    L     F ++              L+D  +G V+ +         AS 
Sbjct: 1   MKKIFCVIWSLFLCLQLGFHTVRADDTLKLYAKSAILMDAGSGRVLFDKSGKSKMPNAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK++T   +          L    T+SKNA+  P  +   + G    + + L  L+++S 
Sbjct: 61  TKILTCLYIIKHC-----NLEEEATVSKNAAAQPQVHLGARAGEKYKVKDLLYGLMLESY 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAI 172
           ND AV +AE    + + F + +N  +++ G  +THF+  +G+        H TTA D+A+
Sbjct: 116 NDCAVILAEHAAGSTENFAKKLNAEARSYGAKSTHFVTPNGLDRTDKNGIHSTTAYDLAL 175

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           +  +   +  +++   + K                N N  +    GA   KTGFT  +G+
Sbjct: 176 IMKQCIKN-KEFLEITRAKSHSFHDASGKRSFTCNNHNALLSMMDGAVSGKTGFTSKAGY 234

Query: 227 NIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDF 280
             V +  +   ++IAV+L       +  +     +L+  G  N +  K I   + +   +
Sbjct: 235 CYVGAVKKNGMTMIAVVLACGWPPHKTYKWSDVRTLVDYGAKNYSYHKIIPDYSKLTDLY 294

Query: 281 YQQNLSNEVPNISE--EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               + ++V   ++   +    K+    + + +  K   +     E++  ++  +  +
Sbjct: 295 VNGGMEHKVSIEAKGGGMTLLLKKGEKVDIKCQIPKSLNAPVKKKEQVGKIEYVLNGR 352


>gi|317128665|ref|YP_004094947.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473613|gb|ADU30216.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           cellulosilyticus DSM 2522]
          Length = 390

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 76/331 (22%), Positives = 135/331 (40%), Gaps = 14/331 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA--ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++ FL+   +    +     +             L+D++T  ++ +     P  PAS+TK
Sbjct: 13  LKLFLLFAIIFSYIDNTSVFAEKKIPEITSEAAILIDSHTEEILFDKNMMEPMYPASITK 72

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++TA +           L   +T+S +A     +     +   +TL+  L+ L+V S ND
Sbjct: 73  IVTAIIAIETQD-----LNDIVTVSSDAVRAIGTRVYLLEDEEITLEQLLQGLMVSSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSK-NLGLSAT-HFMNAHGVVQHGHYTTARDMAILSWR 176
            A+AIAE +  + + F   MN+  +  +G+S   +F N HG+ +  H TTA DMA +S  
Sbjct: 128 AAIAIAEHIDGSVEAFSDRMNDFVRTEVGVSDITNFTNPHGLFEEDHVTTAYDMAKISAY 187

Query: 177 IKTDFPQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +              +         N +    ++    G+K GF   SG+ +  +AI
Sbjct: 188 AMKNETFRELVGTHSVEWVGEGWETIIYNHHPLTRSYDEVIGIKNGFVRMSGYTLSTAAI 247

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPN 291
                LI+V L +  RN   K + +LL  GF +   +     +  +   Y    S  V +
Sbjct: 248 DEHIELISVTLNSPSRNFAQKDTLTLLDYGFSHYETQVLTFEDEPLLKEYIYPDSVAVTS 307

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           +  E      E    N   KE +   +  +D
Sbjct: 308 LKGEEIDYSIENGLINITGKENRLITTVELD 338


>gi|229043310|ref|ZP_04191030.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|229144168|ref|ZP_04272582.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|228639176|gb|EEK95592.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|228726024|gb|EEL77261.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
          Length = 363

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 82/325 (25%), Positives = 126/325 (38%), Gaps = 13/325 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  A +  I  +  I          L++  +G V+       P   AS+TK+MTA +   
Sbjct: 1   MMYASVMPIPTYAKINSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAE 60

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
             K K       +++S  A     S    K G  + L++ +  L+++S ND A  IAES+
Sbjct: 61  SGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESV 115

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMH 186
             +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+     +   +  
Sbjct: 116 GGSIDGFVYLMNQKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKK 174

Query: 187 YFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            F  K  +     YP  N        +  A G KTGFT  +G  +V +A +G   LI V 
Sbjct: 175 IFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKGGLDLIVVT 234

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           L A           +L   GF      K +         +                  E 
Sbjct: 235 LSASSD---WDDHMNLFDKGFDRFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEE 291

Query: 304 INYNTQMKEAKDKESHFIDFEKITL 328
              N  +K   DK +   D  K+  
Sbjct: 292 EKKNVVLKVELDKSTKLTDGVKVGK 316


>gi|30020090|ref|NP_831721.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29895640|gb|AAP08922.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 279

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 15  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 74

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              P+ +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 75  WEDPVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 134

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 135 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAGDVAQLAYHLIKDYPEILEVTHLR 194

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 195 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 254

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L+S  F
Sbjct: 255 MGTSSKTKRFTETNKLMSYAF 275


>gi|187779546|ref|ZP_02996019.1| hypothetical protein CLOSPO_03142 [Clostridium sporogenes ATCC
           15579]
 gi|187773171|gb|EDU36973.1| hypothetical protein CLOSPO_03142 [Clostridium sporogenes ATCC
           15579]
          Length = 378

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 78/341 (22%), Positives = 137/341 (40%), Gaps = 23/341 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLS---------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +F++I+++  +  + P  +                     +D +TG V+ E   +     
Sbjct: 8   KFILILSLIFIVTLIPTKAYGKEESQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPI 67

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT  V   +       L   I IS+NA +   S   +KKG  +TL   L  L++
Sbjct: 68  ASTTKIMTTLVALKY-----GDLDRKIEISENADKIKGSTVGYKKGEKITLRELLYGLML 122

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD---- 169
           +S ND A+AIAE +  + + F + MN  +  +GL  +HF+  HG+ +  HY+TA D    
Sbjct: 123 RSGNDAAIAIAEGIAGSVEGFSKLMNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALA 182

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
            A        +        + +      + Y N N  +     ADG+KTG+T  +G  +V
Sbjct: 183 TATAKKYELFNKIVSSKDVKKEEYSF-TRDYHNINKILWKIPEADGVKTGYTGKAGKCLV 241

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
            S+      +I V+L       R   +  +      N   +K                 V
Sbjct: 242 TSSKINGNDIIIVVLNCT---PRWNETTKIHDYVKNNYDFKKICTKGDILDQAVFEEGSV 298

Query: 290 PNISE-EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             I++ ++    K   NY+ ++ + K+        E    +
Sbjct: 299 NIIADKDIIIPFKNGANYSIKINKPKELNWKVKKGEDFGSI 339


>gi|257456802|ref|ZP_05621986.1| D-alanyl-D-alanine carboxypeptidase DacA [Treponema vincentii ATCC
           35580]
 gi|257445808|gb|EEV20867.1| D-alanyl-D-alanine carboxypeptidase DacA [Treponema vincentii ATCC
           35580]
          Length = 480

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 77/303 (25%), Positives = 120/303 (39%), Gaps = 22/303 (7%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           ++  L+     +            ++D  +G ++ E  PD    PASLTKL+  Y V   
Sbjct: 66  SLLHLAPCTRDIPQPAAISARSAVVMDAASGALLFEKNPDQSIPPASLTKLVAMYTVMQA 125

Query: 69  LKEKKAMLTTPITISKNASEYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           ++  +  L+  I   K +               K   +T++  +  + V S ND AVA+A
Sbjct: 126 VERGEINLSDRIIPPKESWAVNIPPGSSLMFLGKNQQVTVEELMLGVAVVSGNDAAVALA 185

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
                +   FVQ MN     LGL  THF + +G+    + TTARD A  S      +P++
Sbjct: 186 IHTAGSVAAFVQRMNEAVAALGLQNTHFEDVNGL-SEYNRTTARDFARFSAVYVRKYPEH 244

Query: 185 -----------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                                    + P TN  +    G DG+KTGF   SGFNI  +A 
Sbjct: 245 LARFHSARELTYPQPHNMLKSQTSFRQPATNTLLDKLDGCDGIKTGFIYESGFNIALTAQ 304

Query: 234 QGDQSLIAVILG------ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           +     IAVILG      A  +  R      L+   F + + R   N+ ++      +  
Sbjct: 305 RDGNRFIAVILGGAGKNMAEGKALREANGKILMEWTFSHFSTRYAQNFPLELPIIPVMGA 364

Query: 288 EVP 290
           + P
Sbjct: 365 KEP 367


>gi|328464600|gb|EGF35965.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus helveticus MTCC
           5463]
          Length = 431

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 141/373 (37%), Gaps = 46/373 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
            + +I++      F   + A+            +     +D+N+G V+     D     A
Sbjct: 14  LVALISLVSCGATFSAPAKADVANYQTDQVKLNVKSAIAIDSNSGQVLYAKNADKTLPIA 73

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           S+TKLMT Y+  + +K +K      +     I K A+    SN   K G + T+    + 
Sbjct: 74  SMTKLMTVYLTLNAIKNQKLAWDQKVKPTASIVKVANNAEYSNVPLKMGHSYTIKQLYQA 133

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-------- 162
            +++SAN  A+ + +++  ++K F+  M +  K  G+       A G+            
Sbjct: 134 TLIESANGAAMLLGQTIAGSQKAFIDQMRSQVKKWGIKDAKIYTACGLPNGNVGKDAYPG 193

Query: 163 ------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWA------ 206
                 +  +A+DMAI+   +  DFP+ +   ++  L+        K  N NW       
Sbjct: 194 VNKNAENSMSAKDMAIVGQNLIQDFPEVLDTTKLAHLDFKDQGHTTKMANFNWMLKGLSQ 253

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSM 262
                  DG+KTG T A+G   + +       LI V++GA         R   +  L++ 
Sbjct: 254 YDQTYPVDGLKTGTTDAAGACFIGTVNHAGARLITVVMGARHKDGTDPARFMQTKKLMNY 313

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN----TQMKEAKDKES 318
            F         N   +    +N+     + +      +++   ++      +    +K++
Sbjct: 314 VFTKYRPVT-FNAGSQMAGVKNIKVTDGDNATTNLGLKEKTTIWDPADGKTLVAKLNKQT 372

Query: 319 HFIDFEKITLLKN 331
                 K  ++ N
Sbjct: 373 IEAPITKGQVVGN 385


>gi|300853932|ref|YP_003778916.1| D-alanyl-D-alanine carboxypeptidase [Clostridium ljungdahlii DSM
           13528]
 gi|300434047|gb|ADK13814.1| D-alanyl-D-alanine carboxypeptidase precursor [Clostridium
           ljungdahlii DSM 13528]
          Length = 408

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 85/360 (23%), Positives = 139/360 (38%), Gaps = 31/360 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ +    + +L        +                +LD  TG ++    PD  + PA
Sbjct: 1   MKRIVTFALLFLLICSNNPYGVVHAKEMPPPVSADGAVILDAATGQLLYSKNPDTAYPPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S TK+MTA +           L   + I KN      +     +G  +T+ + L  L++ 
Sbjct: 61  STTKIMTALLTLENT-----NLNDKVIIGKNPPNVDGTRVGLCEGEQLTVKDLLYGLLLA 115

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S ND A A+AE +  T  KFV  MN  +K LG   T+F+N  G+    H T+ARD+A++ 
Sbjct: 116 SDNDCAEALAEHIGGTMDKFVVKMNKRAKELGAKNTNFVNPTGLFDESHKTSARDLALMM 175

Query: 175 WRIKTDFPQYMHYFQI------KGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCA 223
             +            I           + ++  N N      +   + G  G KTG+T  
Sbjct: 176 RALSKHPEYSKIATTISYTIPATNKSPQPREVWNENKLIQKQSTYYYSGCLGGKTGYTVQ 235

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           S  + V++A +  Q LI  ++   ++ T    + SL + GF N T  K            
Sbjct: 236 SFHSYVSTATRNGQQLIVALIHDKNK-TFFPDAVSLFNFGFNNFTFTKLYQKGALVTTYN 294

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL--------KNKITK 335
                +P I+       K   + N      KDK   F  F+K  ++          +I K
Sbjct: 295 KDGLSIPLIAAYDFYYIKPKDDTNVPQVTLKDKNLMFRFFKKGDIVDEASISFEGKEIGK 354


>gi|290968005|ref|ZP_06559554.1| serine-type D-Ala-D-Ala carboxypeptidase [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781911|gb|EFD94490.1| serine-type D-Ala-D-Ala carboxypeptidase [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 321

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 13/267 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             ++ +     P              LLD NTG ++   + +   +PAS TK++T     
Sbjct: 29  AFSVPLPEVSSPTAEAEPVTAAESACLLDVNTGKILFSYHGNKWVHPASTTKIVTLLTAL 88

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
               + +  L  P+ IS+ A E  PS         +++  AL  ++V S ND AVA+AE+
Sbjct: 89  ---AQGRERLEQPLYISRQAVETEPSRLGLATTDKVSVREALTGMMVVSGNDAAVAVAET 145

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           L  +   F   MN  +K +G + + F+N +G+ Q  H+TTA DMA ++     ++ ++  
Sbjct: 146 LGGSVPAFADMMNGQAKKMGATHSLFLNPNGLTQVHHHTTAIDMARMAAYGMKNYAEFRD 205

Query: 187 YFQIKGLEIKG-------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
              +K   +K          Y    +    ++GADG+KTG+T A+G  +VASA +   +L
Sbjct: 206 IVGLKSYTMKYLDAHKPKTVYTTNRFLRSGYIGADGIKTGYTRAAGPCLVASATRNGHTL 265

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYN 266
           I  +        R + +A +L  GF +
Sbjct: 266 IVALFN---DAARWQDAARILDYGFRH 289


>gi|225388033|ref|ZP_03757757.1| hypothetical protein CLOSTASPAR_01767 [Clostridium asparagiforme
           DSM 15981]
 gi|225045886|gb|EEG56132.1| hypothetical protein CLOSTASPAR_01767 [Clostridium asparagiforme
           DSM 15981]
          Length = 510

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 20/282 (7%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                         LL+ +TG ++     D  + PAS+TKLMTA +V          L  
Sbjct: 136 TAVEEPVIAAEGAALLNASTGKLLFSKNGDTKFYPASITKLMTALLVAENC-----NLDD 190

Query: 79  PITIS---KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
            +T S       E    +    +G  +T+   L  L++KSAN++  A+AE +  +  KF 
Sbjct: 191 TVTFSSTATTNLEAGAVSLNLVEGDKLTVRQCLYALLLKSANEVGNALAEHVAGSNAKFA 250

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY-------MHYF 188
             MN  +  LG + THF N HG+  + HYTT  DMA+++     +               
Sbjct: 251 DMMNARAAALGCTNTHFTNPHGLNDNDHYTTPNDMALIAKAAFENGTVRTVASTLSYDLP 310

Query: 189 QIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             K    +     +          + G  G KTG+T  +G  +V +  +    LIAV++ 
Sbjct: 311 ATKKNAARTISIGHKMLYPNDSRYYAGIIGGKTGYTSKAGNTLVTAVERDGVRLIAVVM- 369

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              ++T    + +LL  GF     +             N + 
Sbjct: 370 -KSKSTHYTDTKALLDYGFELAKQQTTEGADDSGPGTGNPTA 410


>gi|55822070|ref|YP_140511.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein
           [Streptococcus thermophilus CNRZ1066]
 gi|55738055|gb|AAV61696.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 422

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 79/369 (21%), Positives = 145/369 (39%), Gaps = 35/369 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   II +A++       ++A+           +   ++T TG V+ E     P   A
Sbjct: 8   MKKLQHIIMIALILIGLATPALAQDQTDSFNVAAKHAIAIETTTGKVLYEKDATTPDGVA 67

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 68  SMTKILTAYMVYKAVDQGKITWDTEVGISDYPFNLTVNSEVSNVPLDSRKYTVKQLLDAT 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  TE  FV  M    K  G++     NA G+             
Sbjct: 128 LISSANSAAIALAEKISGTESTFVDTMTAQLKEWGITDAKLFNASGLNNKYLGDNRYPGS 187

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +   ++     K    N+          G
Sbjct: 188 KPDDENTMSALDIAIIADHLIKDYPQVLEITKQTEVDFEGDNKLTTHNYMLEGQENYREG 247

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI V++    G  D + R   +  LL     N  
Sbjct: 248 VDGLKTGTTELAGASFVAHSNENGMSLITVVMNAYNGGDDESARFTATNELLDYVTQNWE 307

Query: 269 DRKK--INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-ESHFIDFEK 325
            +       I+K    +    +   IS  + +    +   N++    K + ++     +K
Sbjct: 308 IKTLNTNGQIVKKNDIKVADGDRKTISARLESDLTVVQKINSRNDSVKIQAKTVTAPIKK 367

Query: 326 ITLLKNKIT 334
              +   I 
Sbjct: 368 GDTIGTAIY 376


>gi|114705796|ref|ZP_01438699.1| penicillin-binding protein [Fulvimarina pelagi HTCC2506]
 gi|114538642|gb|EAU41763.1| penicillin-binding protein [Fulvimarina pelagi HTCC2506]
          Length = 356

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 90/253 (35%), Positives = 134/253 (52%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
                P +            ++D  T  V+      HPW PAS TKLM+AYV F  L+  
Sbjct: 12  AVIGLPLILTTPFAHATPALVVDAGTRAVLFAEEAGHPWYPASTTKLMSAYVTFEALRAG 71

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L TP+TISK A      ++    G  M L++AL  ++V SAN++++++AE +  + +
Sbjct: 72  EVSLDTPVTISKRAMTEASLHAGLSAGRAMRLEDALFAMVVGSANEVSISLAERVAGSVE 131

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   MN T+  LG++AT F N +G+     +TTARD+A+L      DFP+Y   F    
Sbjct: 132 AFAARMNATAARLGMTATRFDNPNGLFAASQHTTARDLALLGLAATRDFPEYRELFTTSI 191

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
           + I GKK    N  +  F G  G+KTGF CASG N+VA A +  + ++ V+LGA     R
Sbjct: 192 VVIDGKKLETENVLLTDFPGTLGLKTGFLCASGRNLVAMAERDGRRILVVLLGATTGRER 251

Query: 253 NKVSASLLSMGFY 265
            + +A L+S  F 
Sbjct: 252 AERAAKLMSEAFA 264


>gi|332366179|gb|EGJ43934.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK355]
          Length = 422

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/375 (17%), Positives = 129/375 (34%), Gaps = 41/375 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  +   + +        +            +D  +G ++ E     P    S+T L+
Sbjct: 1   MKRLFLCFLVLVGLTASKVAADDYNIAAKSAMAVDATSGKILYEKDATTPIEVGSITNLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  +        T + IS  A      P  ++   +     + + +   ++ SAN
Sbjct: 61  TVYLVYEAIDRGDLTADTYVDISDYAYNLTANPNISNVPLEARRYKVKDLIAASLMSSAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FVQ M    K  G++    +N+ G+                   
Sbjct: 121 SATIALAEKVGGSEENFVQMMKAKLKEWGITDATVVNSTGLNTLLLEYASEETDYTASAS 180

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGT 209
                    +  +A D+A++S  +  DFPQ          +I G    N N+        
Sbjct: 181 TSKKNKDSENKFSAYDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQSNF 240

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFY 265
             G DG+K G +   G + VA+  +    +I V+L       D   R   +ASL++    
Sbjct: 241 RSGVDGLKAGSSEKGGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQ 300

Query: 266 NKTDRKKINYIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           N T    +                         S++    ++       +++ +  ++  
Sbjct: 301 NFTQTTIVAEGEAYNKSHSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTKEQGF 360

Query: 320 FIDFEKITLLKNKIT 334
               +K T L     
Sbjct: 361 QAPLKKNTELGTLTY 375


>gi|260103243|ref|ZP_05753480.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus helveticus
           DSM 20075]
 gi|111610195|gb|ABH11586.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus helveticus
           CNRZ32]
 gi|260082956|gb|EEW67076.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus helveticus
           DSM 20075]
          Length = 431

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 140/373 (37%), Gaps = 46/373 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
            + +I++      F   + A+            +     +D+N+G V+     D     A
Sbjct: 14  LVALISLVSCGATFSAPAKADVANYQTDQVKLNVKSAIAIDSNSGQVLYAKNADKTLPIA 73

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           S+TKLMT Y+  + +K +K      +     I K A+    SN   K G + T+    + 
Sbjct: 74  SMTKLMTVYLTLNAIKNQKLAWDQKVKPTASIVKVANNAEYSNVPLKMGHSYTIKQLYQA 133

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-------- 162
            +++SAN  A+ + +++  ++K F+  M +  K  G+       A G+            
Sbjct: 134 TLIESANGAAMLLGQTIAGSQKAFIDQMRSQVKKWGIKDAKIYTACGLPNGNVGKDAYPG 193

Query: 163 ------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF------ 210
                 +  +A+DMAI+   +  DFP+ +   ++  L+ K + +                
Sbjct: 194 VNKNAENSMSAKDMAIVGQNLIQDFPEVLDTTKLAHLDFKDQGHTTKMANFNWMLKGLSQ 253

Query: 211 ----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSM 262
                  DG+KTG T A+G   + +       LI V++GA         R   +  L++ 
Sbjct: 254 YDQAYPVDGLKTGTTDAAGACFIGTVNHAGARLITVVMGARHKDGTDPARFMQTKKLMNY 313

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN----TQMKEAKDKES 318
            F         N   +    +N+     + +      +++   ++      +    +K++
Sbjct: 314 VFTKYRPVT-FNAGSQMAGVKNIKVTDGDNATTNLGLKEKTTIWDPADGKTLVAKLNKQT 372

Query: 319 HFIDFEKITLLKN 331
                 K  ++ N
Sbjct: 373 IEAPITKGQVVGN 385


>gi|303230440|ref|ZP_07317201.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514979|gb|EFL56960.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 279

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 15/272 (5%)

Query: 3   QFLVIIAMA----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +F++ +A      + + +        +       L+D +   ++    PD   +PAS TK
Sbjct: 9   RFILALAFIGAMLLGTVVHGAAPTPPSTIGEAVVLIDADNKEILFAKNPDKWMHPASTTK 68

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++T          K   L    TIS  A+    SN   + G  +TL+  L+ ++V S ND
Sbjct: 69  MVTLLTALEL---KGTQLDELATISPYATSMEESNLGVQVGDQITLEGVLEGMMVASGND 125

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----S 174
            AV +AE++  + + F + MN  +   G   + F+N HG+ Q GH++TARD+A++     
Sbjct: 126 AAVVVAENVSGSVENFAKDMNRIAAKAGAKNSVFLNPHGLTQMGHHSTARDLALIAAYGM 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAI 233
                       Y+++       +    TN  +   + GA+G+KTGFT A+G  ++ASA 
Sbjct: 186 KYQMFRDKVANDYYKVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIASAT 245

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           +   ++I V+L     + R   +   L  GF 
Sbjct: 246 RNGHTMIVVMLN---DDNRWNEAVQFLDYGFK 274


>gi|55820182|ref|YP_138624.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein
           [Streptococcus thermophilus LMG 18311]
 gi|55736167|gb|AAV59809.1| D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein
           [Streptococcus thermophilus LMG 18311]
          Length = 422

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 145/369 (39%), Gaps = 35/369 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   II +A++       ++A+           +   ++T TG V+ E     P   A
Sbjct: 8   MKKLQHIIMIALILIGLATPALAQDQTDSFNVAAKHAIAIETTTGKVLYEKDATTPDGVA 67

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 68  SMTKILTAYMVYKAVDQGKITWDTEVGISDYPFNLTVNSEVSNVPLDSRKYTVKQLLDAT 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  TE  FV  M    K  G++     NA G+             
Sbjct: 128 LISSANSAAIALAEKISGTESTFVDTMTAQLKEWGITDAKLFNASGLNNKYLGDNRYPGS 187

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +   ++     +    N+          G
Sbjct: 188 KPDDENTMSALDIAIIADHLIKDYPQVLEITKQTEVDFEGDNELTTHNYMLEGQENYREG 247

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI V++    G  D + R   +  LL     N  
Sbjct: 248 VDGLKTGTTELAGASFVAHSNENGMSLITVVMNAYNGGDDESARFTATNELLDYVTQNWE 307

Query: 269 DRKK--INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-ESHFIDFEK 325
            +       I+K    +    +   IS  + +    +   N++    K + ++     +K
Sbjct: 308 IKTLNTNGQIVKKNDIKVADGDRKTISARLESDLTVVQKINSRNDSVKIQAKTVTAPIKK 367

Query: 326 ITLLKNKIT 334
              +   I 
Sbjct: 368 GDTIGTAIY 376


>gi|239624021|ref|ZP_04667052.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522052|gb|EEQ61918.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 482

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/357 (18%), Positives = 127/357 (35%), Gaps = 37/357 (10%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR+   +I+++ M+  +    + A          +     ++D ++G V+          
Sbjct: 1   MRRLSYIIVSLIMVLTMSSITAFARPDWPTDTGVQSEAGIVMDMDSGAVLFAQNIHEQKI 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNAL 108
           PAS+TKL+TA VV          L   +T S +A         +    ++G  +++   L
Sbjct: 61  PASITKLLTALVVIENCD----DLDDKVTFSHDAVYNVESGSGNKLALEEGDVLSVRECL 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +++++S+N  A A+AE +  +   FV  MN    +LG   +HF N  G+      T+A 
Sbjct: 117 YVMLLQSSNQAANALAEYIGGSRSGFVDMMNRKVADLGCQESHFANPSGLNDDTQRTSAY 176

Query: 169 DMAILSWRIKTDFP--------------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
           DMA+++     +                   +                   +V  +  A 
Sbjct: 177 DMALIARAAFQNQQLLEISSTRKASIPATINNPDGRTFSMEHKLLITEDENSVEYYPDAV 236

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
             KTG+T  +G  +V  A +G +  IAV L +  + T    + ++L  GF    +    +
Sbjct: 237 AGKTGWTSQAGQTLVTYARRGGRGEIAVTLRS-TQKTHYSDTKTILDFGFARFQNVNIAD 295

Query: 275 ------YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                            + +   +  +                E +       D  K
Sbjct: 296 NETEYVTGDTPVTIGGETYQPSELYIDKTAVITIPNEAGFTDAERELVTELPKDHPK 352


>gi|229190080|ref|ZP_04317086.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus ATCC
           10876]
 gi|228593409|gb|EEK51222.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus ATCC
           10876]
          Length = 317

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I +   +  + PAS++K+MTAY++   +   K  
Sbjct: 53  VVPPKYIPPEINAKAAMIIDASDGDIIYQYNENEAFAPASMSKMMTAYLLLESIHNGKVR 112

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
               + +S  A++   +    +   T+T+ +    L+++SAN+ AVA+AE + K+EK FV
Sbjct: 113 WEDSVKMSAKAAQTEGARIPVQVNDTLTVKDLYHALMIESANNSAVALAEHMAKSEKDFV 172

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q M+  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 173 QLMDAKAKQLKMSEHAKFANASGLQEPDGSETKMTAADVAQLAYHLIKDYPEILEVTHLR 232

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 233 QSQLAFNNINVISTNDMLNKNNKSLYIEGMDGLKTGFTDSAGYCFTGTAKQGDNRIITVV 292

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G  ++  R   +  L+S  F
Sbjct: 293 MGTSNKTKRFTETNKLMSYAF 313


>gi|311029700|ref|ZP_07707790.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
           [Bacillus sp. m3-13]
          Length = 414

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 13/318 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            + ++ M   ++I                L+D+ +G+ + E        PAS+TK++TA 
Sbjct: 10  IIPLLVMVFGNSITVHAEGPGDLFSESVILIDSKSGNTLYEKDSKREMYPASITKIVTAI 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +           L   +T+S+NA +   +     +G  +TL   ++ L++ S ND   AI
Sbjct: 70  IAIEE-----GNLQDIVTVSENARDQDGTRVYLLEGEKVTLKKLVQGLLINSGNDAGTAI 124

Query: 124 AESLCKTEKKFVQHMNNTSKN-LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           AE L  +EK F + MN   K  +G+  T+F N HG+    H TTA+DMA ++     +  
Sbjct: 125 AEHLDGSEKAFAKRMNTFVKEKVGVKNTNFTNPHGLYHPDHVTTAQDMAKIAQYAMKNET 184

Query: 183 QYMHYFQIKGLEIKG---KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                   +   I         N +  +  + G  G+K G+   SG  +V SA +    L
Sbjct: 185 FREIVGTKEMEWIGEGWETTLFNHHRLLWDYEGTTGVKNGYVPESGHTLVTSAKRDGMDL 244

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           I V + A  +    K + +LL  GF N       + I K     + S     +++ V   
Sbjct: 245 IVVTMKAASKYYIYKDTMTLLDYGFANF----ITDEIKKGEMVTDASGREYMLAKNVHVA 300

Query: 300 QKEIINYNTQMKEAKDKE 317
           +++    N ++ + KD  
Sbjct: 301 KRDEETINLRVNKDKDLV 318


>gi|228997557|ref|ZP_04157170.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|228762185|gb|EEM11118.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
          Length = 329

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 11/274 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   L  +  A+L   F F       K     L+D  +  ++ +   D P++ ASL+K+M
Sbjct: 1   MLLILSFLITAILVFYFYFYVNGPLIKAKSAILIDATSEEIVYKKNEDTPFSSASLSKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+V   +++ K      + IS ++ +   +N        +T+ +    +++ S N  A
Sbjct: 61  TEYIVLEQIQKGKIKWDDRVKISNSSIQMEGNNIDITFEDQITIRDLFHAMVLASDNSAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQHGHYT--TARDMAILSWRI 177
           V +AE + K E+ F   MN  +  LGLS  T+F NA GV+     +  TA D + L+  +
Sbjct: 121 VFLAEHISKNEQDFTNLMNEKATQLGLSNKTYFANATGVINKQEESKITALDASKLAQHL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIV 229
            TD+P  +   Q+   +   K     N     +         G DG++T F+  +G++  
Sbjct: 181 ITDYPMILEITQLTSYQFTFKDIHVFNTNKMLYSLDSKIKFKGVDGLQTSFSNPAGYSFA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           ++A QG++  I++++ A   N+    +  L + G
Sbjct: 241 STAKQGNKRFISIVMKANGENSAFIEAKKLFTYG 274


>gi|229005188|ref|ZP_04162908.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228756048|gb|EEM05373.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
          Length = 329

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 11/274 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   L  +  A+L   F F       K     L+D  +  ++ +   D P++ ASL+K+M
Sbjct: 1   MLLILSFLITAILVFYFYFYVNGPLIKAKSAILIDATSEEIVYKKNEDTPFSSASLSKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+V   +++ K      + IS ++ +   +N        +T+ +    +++ S N  A
Sbjct: 61  TEYIVLEQIQKGKIKWDDRVKISNSSIQMEGNNIDITFEDQITIRDLFHAMVLASDNSAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQHGHYT--TARDMAILSWRI 177
           V +AE + K E+ F   MN  +  LGLS  T+F NA GV+     +  TA D + L+  +
Sbjct: 121 VFLAEHISKNEQDFTNLMNEKATQLGLSNKTYFANATGVINKQEESKITALDASKLAQHL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIV 229
            TD+P  +   Q+   +   K     N     +         G DG++T F+  +G++  
Sbjct: 181 ITDYPMILEITQLTSYQFTFKDIHVFNTNKMLYSLDSKIKFKGVDGLQTSFSNPAGYSFA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           ++A QG++  I++++ A   N+    +  L + G
Sbjct: 241 STAKQGNKRFISIVMKANGENSAFIEAKKLFTYG 274


>gi|324329337|gb|ADY24597.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 423

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 141/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++   I+ + +LS  ++    S AE     +     L D +TG ++ E  PD     AS
Sbjct: 1   MKKIFSILLVFLLSISSLGVTTSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLAIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              ++ L    
Sbjct: 61  MSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVRELYHSI 120

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 121 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 180

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  + T +P+ +   + +         K  +  N NW       
Sbjct: 181 DPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 241 AYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFNNFE 300

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            Q           +E+    K+      ++    DK          
Sbjct: 301 KQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKIGTEVDKSLAEDGHLVA 360

Query: 322 DFEKITLLKNKITK 335
             +K   + +   +
Sbjct: 361 PIKKGAKVGSITLE 374


>gi|42784563|ref|NP_981810.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus ATCC
           10987]
 gi|42740495|gb|AAS44418.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus ATCC
           10987]
          Length = 423

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 142/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ L I+ + +LS  ++    S AE     +     L D +TG ++ E  PD     AS
Sbjct: 1   MKKILSILLVFLLSISSLGVTTSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLAIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              ++ L    
Sbjct: 61  MSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVRELYHSI 120

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 121 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 180

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  + T +P+ +   + +         K  +  N NW       
Sbjct: 181 DPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 241 AYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFNNFE 300

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            Q           +E+    K+      ++    DK          
Sbjct: 301 KQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKVGTEADKSLAEDGHLVA 360

Query: 322 DFEKITLLKNKITK 335
             +K   + +   +
Sbjct: 361 PIKKGAKVGSITLE 374


>gi|225017092|ref|ZP_03706284.1| hypothetical protein CLOSTMETH_01017 [Clostridium methylpentosum
           DSM 5476]
 gi|224950149|gb|EEG31358.1| hypothetical protein CLOSTMETH_01017 [Clostridium methylpentosum
           DSM 5476]
          Length = 445

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 79/373 (21%), Positives = 141/373 (37%), Gaps = 39/373 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++ + ++   + ++S   P  + A              L++  TG VI E      + P
Sbjct: 1   MKRLIFLLLPCIVLVSLFAPLTAQAAYTPDFEINSEAAYLVNMETGKVIYEKNAQTQYLP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAML-TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           AS TK+MTA +    + +    + T P  +         SN+  +    +++ + L  L+
Sbjct: 61  ASTTKIMTAIIALETIDDIDNTMVTAPAYVFDQLYGLSASNADLRVDEQLSMKDLLYALM 120

Query: 113 VKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++SA + A  IA+ + +   +KFV  MN  ++ +G + THF+NAHG+ +    TTA DM 
Sbjct: 121 LRSACEGASIIADYIGEGDIQKFVDMMNAKAEEIGCTNTHFVNAHGLDEPDQLTTAYDMY 180

Query: 172 ILSWRIKTDFPQYMHYFQI------------KGLEIKGKKYPNTNWAVGTF-------LG 212
           +++    T+      + +I            K  E +   + N   +  T          
Sbjct: 181 LITNYALTNEQIGARFREIATTYSYTMAATNKHPEPRVISHTNKMMSSNTDLNGGYSRSY 240

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR--NKVSASLLSMGFYNKTDR 270
             G+KTG T    FN+V  A Q   + + V LGA  +N+       A+L    F     +
Sbjct: 241 VQGIKTG-TSNEYFNLVTMAKQDGYTYLLVTLGAHGQNSFVTYSDHAALYDWAFKTFESK 299

Query: 271 KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK--------DKESHFID 322
                  K                 V TTQ  +     +  + +          E+    
Sbjct: 300 VLARPGSKTIPNDVKVEFAKGTDSLVLTTQDAVSELLPKDVKEEAVMWDTSSLPETVQAP 359

Query: 323 FEKITLLKNKITK 335
             K   +     K
Sbjct: 360 IRKGDKIGEVQLK 372


>gi|322517678|ref|ZP_08070541.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis ATCC 49124]
 gi|322123666|gb|EFX95258.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis ATCC 49124]
          Length = 422

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 142/366 (38%), Gaps = 35/366 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   II + ++       ++A+           +   ++T TG V+ E     P   A
Sbjct: 8   MKKLQHIIMITLILIGLTTPALAQDQTDDFNVAAKHAIAIETTTGKVLYEKDATTPNGVA 67

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 68  SMTKILTAYMVYKAVDQGKINWDTEVNISDYPFNLTVDSEVSNIPLDSRKYTVKQLLDAT 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  TE  FV  M    K  G++     NA G+             
Sbjct: 128 LISSANSAAIALAEKISGTESAFVDTMTAQLKEWGITDAKLFNASGLNNKYLGDNRYPGS 187

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +    +  +  K    N+          G
Sbjct: 188 KPDDENTMSALDVAIIADHLIKDYPQVLEITKQTETDFERDNKLTTHNYMLEGQDNYREG 247

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI V++    G  D   R   +  LL     N  
Sbjct: 248 VDGLKTGTTELAGASFVAHSNEHGMSLITVVMNADNGGEDEAARFTATNELLDYVTQNWE 307

Query: 269 DRKKINYI--IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-ESHFIDFEK 325
            +        +K    +    +   IS ++ +    +   N++    K K ++     +K
Sbjct: 308 IKTLNTKGQIVKKNDIKVADGDSQTISAKLESDLIVVQKINSKNDAVKIKAKTITAPIKK 367

Query: 326 ITLLKN 331
              +  
Sbjct: 368 GDTIGT 373


>gi|312868004|ref|ZP_07728208.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis F0405]
 gi|311096408|gb|EFQ54648.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis F0405]
          Length = 413

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 139/364 (38%), Gaps = 32/364 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFP---FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++F +  +   +L    P    L+            ++ +TG ++ E   +   +   L
Sbjct: 1   MKKFFLSFLTFILLLCSLPYQVVLADELELPAQSAIAVEADTGKILYEKDSEKKRDVGGL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLIV 113
           + L+T Y++F  + EKK  L  PI +S+ A   +    + +   + +  T++  L  L+V
Sbjct: 61  STLLTTYLIFEAIHEKKLSLKDPIKLSEKALALNYIEGAGTLPMEANQYTVEQLLTALLV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-----------G 162
            +++  A+A+AE +  +EK FV+ M       G+ + H +NA G+               
Sbjct: 121 GNSSTAALALAEKVGGSEKSFVEKMKQKLTEWGIQSPHLINATGLNTQTISGDPDGKEDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +  DFP+   Y           +  N N  +        G DG++ 
Sbjct: 181 NQLSAYDIAVIAKHLLQDFPEVTKYTSKPTALFSNTQIENPNLMLEGMPNYRSGVDGLRV 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
             +   G    AS  Q    +I V+LG      D   R   ++SL++           + 
Sbjct: 241 SNSNKGGITFAASTTQNGIHMITVVLGVDAVDGDPYARFVATSSLMNYVVRTFVPSIVVK 300

Query: 275 YIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                               +    ++    +K+      +++   ++ES     +  T 
Sbjct: 301 EGDPYGKSKATIMDGKSETVLAVAKKDFYIVEKQGNQAEPKIQFKSNQESFRAPVKSGTS 360

Query: 329 LKNK 332
           L   
Sbjct: 361 LGKL 364


>gi|229029247|ref|ZP_04185338.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228732060|gb|EEL82951.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 366

 Score =  147 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 77/328 (23%), Positives = 127/328 (38%), Gaps = 13/328 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++I  A +  I  +  +          L++  +G V+           AS+TK+MTA +
Sbjct: 1   MLLIMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHESQKIASITKIMTALL 60

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                K K       +++S  A     S    K G  + L++ +  L+++S ND A  IA
Sbjct: 61  AAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIA 115

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQ 183
           E++  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+     +   
Sbjct: 116 ENVGGSIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ET 174

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A +    LI
Sbjct: 175 FKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLI 234

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
            V L A           +L   GF        +         +                 
Sbjct: 235 VVTLSASSD---WDDHMNLFDKGFERFKQTNVVGQGALAEITEKKYANHVYTKNSFAVPL 291

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKITL 328
            E    +  +K   DK +   D  K+  
Sbjct: 292 TEQERKDVVLKVELDKSAKLKDGVKVGK 319


>gi|300854319|ref|YP_003779303.1| D-alanyl-D-alanine carboxypeptidase-like protein [Clostridium
           ljungdahlii DSM 13528]
 gi|300434434|gb|ADK14201.1| D-alanyl-D-alanine carboxypeptidase related protein [Clostridium
           ljungdahlii DSM 13528]
          Length = 367

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 138/341 (40%), Gaps = 21/341 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +    I+   +L NI  +   A                   +D+ +  ++ +        
Sbjct: 5   KSLSYIVITFILFNICSYTVFADDKNSSFREPNINARCAIAMDSKSKVIMYQKNASELVP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS TK+MT  V   + K     L   + IS  ++    S   +KKG ++TL   L  L+
Sbjct: 65  MASTTKIMTVLVAIKYGK-----LDEKVQISSRSAGIRGSVVGYKKGESITLKELLYGLM 119

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND A+AI+E +  + ++FV+ MN  +  +G+  THF   HG+ +  HYTTA D+A+
Sbjct: 120 LRSGNDAAIAISEGVSGSVEEFVKLMNEYASEIGVINTHFKTPHGLDKEEHYTTAYDLAV 179

Query: 173 LSWRIKTDFPQYMHYFQIK---GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           L+   K +                    + Y N N  +     A+G+KTG+T  +G  +V
Sbjct: 180 LTSIAKNNTLFNEIVSSKDVDGPQNGFTRSYHNINKILWKIPDANGVKTGYTGKAGKCLV 239

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
            S       +I V+L       R + +  +      N    K  +   K    +    ++
Sbjct: 240 TSTKVQGNDVIIVVLNCP---RRWEETEKIYKYVDKNFKFNKLFSKGDKALELRVNKKDL 296

Query: 290 PN-ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                ++V    K     + ++ + +  +      ++I +L
Sbjct: 297 KLECEDDVIVPIKNGFKCSVKIIKPQRIKYSVNKGDRIGML 337


>gi|291532593|emb|CBL05706.1| D-alanyl-D-alanine carboxypeptidase [Megamonas hypermegale ART12/1]
          Length = 424

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 84/334 (25%), Positives = 145/334 (43%), Gaps = 15/334 (4%)

Query: 2   RQFLVIIAMAMLSN--IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++  +I ++ +L                     L+D +   V+     D   +PAS TK+
Sbjct: 27  KKIAIIFSLCLLICNIALAKTLPNPDTSAVSACLIDADDNGVLYGKDEDKIMHPASTTKI 86

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA +     K     L  P+ I+  A    PS+   + G  +TL  AL  +++ S ND 
Sbjct: 87  MTAILALESGK-----LDEPLVITPEAVNTEPSSLGLRLGDKITLREALTGMMIVSGNDA 141

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVA+A+++  +   F + MN+ +K LG   THF+N HG+   GHY+TA DMAI++     
Sbjct: 142 AVAVAQTVAGSVPAFAKMMNDKAKELGAVNTHFLNPHGLTAQGHYSTAHDMAIIASYAMK 201

Query: 180 DFP----QYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQ 234
                       + +K ++   +    TN  + + F GA+G+KTGFT A+G  +VASA +
Sbjct: 202 KPEFREIVSKKAYNMKYMDGHTEYVTTTNRFLKSGFEGANGIKTGFTNAAGDCLVASATR 261

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           G ++LIAV       + R   + + L  GF      +  +  +         N++     
Sbjct: 262 GQKTLIAVFYN---DDYRWDDAPTWLEFGFSFYDPSELQDKTVVSKQNVIKLNKITEQRI 318

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +      + +         K K  +    + +  
Sbjct: 319 KHSRETNKNLAALDAAIVNKAKSLNNKTIDVVDT 352


>gi|258614356|ref|ZP_05712126.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium DO]
 gi|261209455|ref|ZP_05923818.1| predicted protein [Enterococcus faecium TC 6]
 gi|289567521|ref|ZP_06447868.1| predicted protein [Enterococcus faecium D344SRF]
 gi|294616358|ref|ZP_06696151.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1636]
 gi|260076583|gb|EEW64347.1| predicted protein [Enterococcus faecium TC 6]
 gi|289160683|gb|EFD08636.1| predicted protein [Enterococcus faecium D344SRF]
 gi|291590872|gb|EFF22588.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1636]
          Length = 435

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|225867886|ref|YP_002743834.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701162|emb|CAW98055.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus equi
           subsp. zooepidemicus]
          Length = 412

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 143/366 (39%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIF-PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ L+ + +  +S +  P  +        +   ++ ++G ++ E   D   + ASL+K+
Sbjct: 1   MKKVLIALTILAISCLAYPAQADHYDISAKHAIAVELDSGKILYEKDADKTVSVASLSKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  ++  K    + +TIS            ++        T+   LK LIV +A
Sbjct: 61  LTAYLVYKEVQAGKLKWDSSVTISNYPYELTTNYTISNVPLDARKYTVKELLKALIVTNA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------G 162
           N  A+A+AE +  TE KFV  M    K  G++    +NA G+  H               
Sbjct: 121 NSPAIALAEKIGGTEAKFVDKMIAQLKEWGITDAKVVNASGLPNHILGEHIYPGSSLDDD 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +  +FP+ +        E   ++  + N+ +        G DG+  
Sbjct: 181 NQFSAADLALVTSHLLKEFPEVLKLSSQVQAEFNHQQIFSYNYMLKGMPNYRDGVDGLFV 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            ++   G + +A++++ +  +I V+L A     +       +  LL     +      + 
Sbjct: 241 SYSEKGGSSFLATSVENNMRIITVVLNADHAQDNDTAVFTATNQLLQYVLTHFKKVVVLE 300

Query: 275 YIIKDFYQQNLSNEVPNI------SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               D  +     + P         +++   +       T  + +  K       +K   
Sbjct: 301 KGKPDQLKALPVLDSPQKKIQLVPKKKLTMIKALDDKSKTTFQISDTKNPLVAPIQKGQT 360

Query: 329 LKNKIT 334
           L     
Sbjct: 361 LAKATL 366


>gi|311068836|ref|YP_003973759.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
 gi|310869353|gb|ADP32828.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
          Length = 383

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/318 (19%), Positives = 115/318 (36%), Gaps = 11/318 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            +++ A  +          A         ++D  +G V+           AS+TK+MTA 
Sbjct: 10  IILVTAFLLTFIKEHKAYAAINVSAKSAIVIDGASGRVLFAKDEHEKRRIASITKIMTAV 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     K     +   +T+S NA     S    K+G  + L + +  L+++S ND A AI
Sbjct: 70  LAIESGK-----MEETVTVSANAVRTEGSAIYLKEGQKVKLKDLVYGLMLRSGNDAAAAI 124

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +   FV  MN  ++ +G+  T F N HG+  H ++ +      +  +       
Sbjct: 125 AEHVGGSLGGFVYMMNQKAEQIGMENTRFQNPHGLDDHENHYSTAYDMAILTKYAMKLKD 184

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           Y      K  + +  +    N      G +  + G KTG+T  +   +V++A +    LI
Sbjct: 185 YQTISGTKVYKAETMESVWKNKNKLLTGLYQYSTGGKTGYTKLAKRTLVSTASKDGTDLI 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV +   +         ++    F +               ++        I  +V    
Sbjct: 245 AVTINDPND---WDDHMNMFEYVFNHYKTYIVAKKGDIPKLKETFYGSRAFIKRDVTYLL 301

Query: 301 KEIINYNTQMKEAKDKES 318
            E      ++     K  
Sbjct: 302 NEAEKDEVKINTTLLKPK 319


>gi|226952491|ref|ZP_03822955.1| D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter sp. ATCC 27244]
 gi|226836762|gb|EEH69145.1| D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter sp. ATCC 27244]
          Length = 445

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 11/334 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L++        ET +   ++++D  +G +IAE+       PASLTK+M AYV    ++  
Sbjct: 25  LAHATLLNISPETVEAQAWSIVDAQSGQIIAEHNSHVQRAPASLTKMMVAYVALKEIEAG 84

Query: 73  KAMLTTPITIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           K       T +   N   +  S    K+G  +++D  L  LIV SAND A+ +AE +  +
Sbjct: 85  KLRKEDVTTATSVVNTVMWDESQMYLKEGEQISVDQLLAGLIVMSANDAALTLAEKISGS 144

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
             +F+  MN  ++ LG+  THF N  G+    HY+TA D+ +L+  I T  P+Y++Y ++
Sbjct: 145 VPQFIIRMNQEAQALGMKDTHFSNPAGITMPDHYSTAADLGLLAQAIVTKTPEYLYYSKM 204

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVI 243
                  + +  TN A+     ADG+KTGFT A+G+N+  +A +         + LI ++
Sbjct: 205 PSFSYNQRFHRATNLALKIDPTADGLKTGFTKAAGYNLALTAERPTLNPHIDKRRLIVIV 264

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           LG  +  TR +V+  L+++ +    D + I           + + +     E        
Sbjct: 265 LGTPNAITRAEVANKLMNLAYAYTRDEEVIPKHQLIAELPVIRSTLKIFKVETQQPTIVT 324

Query: 304 IN-YNTQMKEAKDKESHFID-FEKITLLKNKITK 335
            + Y+       ++        + +     KI +
Sbjct: 325 TSLYDQATPIDLNQFDPLTQRLQVVDQNGVKIIE 358


>gi|160935578|ref|ZP_02082953.1| hypothetical protein CLOBOL_00468 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441322|gb|EDP19032.1| hypothetical protein CLOBOL_00468 [Clostridium bolteae ATCC
           BAA-613]
          Length = 418

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 64/395 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M+Q++ +I + +        + A++                         L+D +TG ++
Sbjct: 1   MKQWIFLITLTISLVCTQMNAAADSWTSVPATKEVREDGDFLKLYAQSAVLMDGDTGRIL 60

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                D     AS TK+MT  +     + +       +  S NA+  P  +   ++G   
Sbjct: 61  YGKGQDIIRPMASTTKIMTCILALENGRGE-----DAVKASSNAASQPKVHLGVREGEEY 115

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--- 159
            L++ L  L+++S ND AV IAE +  + + F   MN  +  LG   T+F+  +G+    
Sbjct: 116 RLEDLLYALMLESYNDAAVMIAEHIGGSVEGFAAMMNEKAAGLGCGDTYFITPNGLDGVK 175

Query: 160 ------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK---------YPNTN 204
                 +H H TTA D+A +     T+ P    + +I   +                N N
Sbjct: 176 TDEQGKEHIHSTTASDLARIMRYCVTESPAKDEFLKITQTQNHYFTDMAGKRSFNCYNHN 235

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLS 261
             +    G    KTGFT  +G++ V +     ++ +  +LG      +  +   +  L +
Sbjct: 236 AFLTMMEGVLSGKTGFTGGAGYSYVGAMENQGRTYVIALLGCGWPPHKTYKWSDARKLYT 295

Query: 262 MGFYNKTDRKKINYIIKDFY-------QQNLSNEVPNISEE---------VCTTQKEIIN 305
            G  +   +                   +     +  +            +     E   
Sbjct: 296 YGLEHFKMKDVFQEETFARVPVSGGLCWKEGEGAIDQVELSMMLNPDDMHLTLLMGEGEE 355

Query: 306 YNTQMKEAKDKESHFIDFEKITL----LKNKITKK 336
                K      +   + +++      L   + K+
Sbjct: 356 ARVVKKVPSILMAPVREGQQVGTVDYYLGEVLVKR 390


>gi|322390982|ref|ZP_08064488.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 903]
 gi|321142357|gb|EFX37829.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 903]
          Length = 413

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 140/364 (38%), Gaps = 32/364 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFP---FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++F +  +   +L    P    L+            ++ +TG ++ E   +   +   L
Sbjct: 1   MKKFFLSFLTFILLLCSLPYQVVLADELDLPAQSAIAVEADTGKILYEKDSEKKRDVGGL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLIV 113
           + L+T Y++F  + EKK  L  PI +S+ A   ++   + +   + +  T+D  L  L+V
Sbjct: 61  STLLTTYLIFEAIHEKKLSLKDPIKLSEKALALNDIEGAGTLPMEANQYTVDQLLTALLV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-----------G 162
            +++  A+A+AE +  +EK FV+ M       G+ + H +NA G+               
Sbjct: 121 GNSSTAALALAEKVGGSEKSFVEKMKQKLSEWGIQSPHLINATGLNTQTINGDPDGKEDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +  DFP+   Y           +  N N  +        G DG++ 
Sbjct: 181 NQLSAYDIAVIAKHLLQDFPEVTKYTSKPTALFSNTQIENPNLMLEGMPNYRSGVDGLRV 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
             +   G    AS  Q    +I V+LG      D   R   ++SL++           + 
Sbjct: 241 SNSTKGGITFAASTTQNGIHMITVVLGVEAVDGDPYARFVATSSLMNYVVRTFVSSIVVK 300

Query: 275 YIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                               +    ++    +K+      +++   ++ES     +  T 
Sbjct: 301 EGDPYGKSKATIMDGKSETVLAVAKKDFYIVEKQGSQAEPKIQFKSNQESFRAPVKSGTS 360

Query: 329 LKNK 332
           L   
Sbjct: 361 LGKL 364


>gi|161507933|ref|YP_001577897.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus helveticus DPC
           4571]
 gi|160348922|gb|ABX27596.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus helveticus DPC
           4571]
          Length = 431

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 71/373 (19%), Positives = 140/373 (37%), Gaps = 46/373 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
            + +I++      F     A+            +     +D+N+G V+     D     A
Sbjct: 14  LVALISLVSCGATFSAPVKADGANYQTDQVKLNVKSAIAIDSNSGQVLYAKNADKTLPIA 73

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           S+TKLMT Y+  + +K +K      +     I K A+    SN   K G + T+    + 
Sbjct: 74  SMTKLMTVYLTLNAIKNQKLAWDQKVKPTASIVKVANNAEYSNVPLKMGHSYTIKQLYQA 133

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-------- 162
            +++SAN  A+ + +++  ++K F+  M +  K  G+       A G+            
Sbjct: 134 TLIESANGAAMLLGQTIAGSQKAFIDQMRSQVKKWGIKDAKIYTACGLPNGNVGKDAYPG 193

Query: 163 ------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWA------ 206
                 +  +A+DMAI+   +  DFP+ +   ++  L+        K  N NW       
Sbjct: 194 VNKNAENSMSAKDMAIVGQNLIQDFPEVLDTTKLAHLDFKDQGHTTKMANFNWMLKGLSQ 253

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSM 262
                  DG+KTG T A+G   + +       LI V++GA         R   +  L++ 
Sbjct: 254 YDQTYPVDGLKTGTTDAAGACFIGTVNHAGARLITVVMGARHKDGTDPARFMQTKKLMNY 313

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN----TQMKEAKDKES 318
            F         N   +    +N+     + +      +++   ++      +    +K++
Sbjct: 314 VFTKYRPVT-FNAGSQMAGVKNIKVTDGDNATTNLGLKEKTTIWDPADGKTLVAKLNKQT 372

Query: 319 HFIDFEKITLLKN 331
                 K  ++ N
Sbjct: 373 IEAPITKGQVVGN 385


>gi|254975737|ref|ZP_05272209.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-66c26]
 gi|255093124|ref|ZP_05322602.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CIP
           107932]
 gi|255314866|ref|ZP_05356449.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-76w55]
 gi|255517540|ref|ZP_05385216.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-97b34]
 gi|255650651|ref|ZP_05397553.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-37x79]
 gi|306520578|ref|ZP_07406925.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-32g58]
          Length = 394

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 80/358 (22%), Positives = 153/358 (42%), Gaps = 30/358 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 5   LKKIISLAMILVFIIPNYSYADGKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 64

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 65  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 124

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 125 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 184

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +   + + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 185 DIAILGKYMFDHYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 244

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 245 YCLSFSMVVNKNEKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 304

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              K               +E+ T  K+  +  +++K      +     +K   +   
Sbjct: 305 IGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIK----NIEYPVKKGDTMGVI 358


>gi|195941738|ref|ZP_03087120.1| serine-type D-Ala-D-Ala carboxypeptidase (dacA) [Borrelia
           burgdorferi 80a]
 gi|218249458|ref|YP_002375112.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi ZS7]
 gi|226321911|ref|ZP_03797437.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           Bol26]
 gi|218164646|gb|ACK74707.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi ZS7]
 gi|226233100|gb|EEH31853.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           Bol26]
 gi|312148150|gb|ADQ30809.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi JD1]
 gi|312149468|gb|ADQ29539.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi N40]
          Length = 396

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 84/351 (23%), Positives = 136/351 (38%), Gaps = 28/351 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M   L +I      N+F          +       L+D +T  ++    P+  + PASLT
Sbjct: 1   MLLTLFLIFFPFCYNLFAVNLAEINKLSEYAKSIVLMDFDTKRILYSKKPNLVFPPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN----STFKKGSTMTLDNALKLLIV 113
           K++T Y      +++   L + + IS +AS Y           +KG  +  +  LK L V
Sbjct: 61  KIVTIYTALIEAEKRNIKLKSIVPISDSASYYNAPPNSSLMFLEKGQIVNFEEILKGLSV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND ++AIAE +      FV  MN    NLGL   HF+   G     +  TA DMA  
Sbjct: 121 SSGNDSSIAIAEFVVGNLNSFVNLMNINVLNLGLFNMHFVEPSG-YSSENKITALDMAFF 179

Query: 174 SWRIKTDFPQYMHYFQIKGL--------------EIKGKKYPNTNWAVGTFLGADGMKTG 219
                  F   ++   +K                +    K  N N  +  +  +DG+KTG
Sbjct: 180 VKSYIEKFKFMLNIHSLKYFIYPKSRNLGTALSSKFLNLKQRNANLLIYDYPYSDGIKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILG------ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           +   SG N+VA+A +G++ LIAV+LG            R+ ++ +L   GF   +    I
Sbjct: 240 YIKESGLNLVATAKKGERRLIAVVLGVEKGINGFGEKMRSSIAKNLFEYGFNKYSKFPLI 299

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
             + +  Y   +        E       +       +    DK    +  +
Sbjct: 300 VKLKEKVYNGTVDTVALFSKEPFYYILTKDEFDKINISYTVDKLVAPLSGD 350


>gi|166031716|ref|ZP_02234545.1| hypothetical protein DORFOR_01416 [Dorea formicigenerans ATCC
           27755]
 gi|166028169|gb|EDR46926.1| hypothetical protein DORFOR_01416 [Dorea formicigenerans ATCC
           27755]
          Length = 430

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 132/344 (38%), Gaps = 35/344 (10%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
             +        L+D ++G V+     +     AS TK+MT  +    + +        +T
Sbjct: 48  EPQNLYAQSAVLMDADSGRVLFGKEEEAIRPMASTTKIMTCIIALEHMTD-----NEIVT 102

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S  A+  P  +   ++G    L + L  L+++S ND AV +AE +  + + FV+ MN  
Sbjct: 103 ASAYAASQPKVHLGVREGQQFYLRDILFSLMLESHNDSAVMVAEEIAGSVEAFVKMMNEK 162

Query: 142 SKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQ---YMHYFQIKGLE 194
           ++ LGL+ THF+  +G+        H TTA ++A +      D P+   ++     K   
Sbjct: 163 AEELGLTKTHFVTPNGLDGEDEGGVHATTAMELAKIMKYCIMDSPEKEMFLDITGTKEYH 222

Query: 195 IKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            +           N N  +    GA   KTGFT  +G+  V +  + +++ I  +L    
Sbjct: 223 FRDLKGTSSYTCTNHNAFLTMMDGAISGKTGFTADAGYCYVGALRRDERTFIVALLACGW 282

Query: 249 RNT---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE---------- 295
            N    +   +  L+  G  N   R     + K       S    NI ++          
Sbjct: 283 PNHKGYKWSDTKKLMEYGLANYEYRNVWQELPKQEIVVKDSGNDQNIYQKNSVAEVEIQQ 342

Query: 296 ----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
               +    +   N    ++  K   +     +K+  ++  + K
Sbjct: 343 KPEVLKVLLRTDENVEISVQMEKALSAPVEKGQKVGEVRYILDK 386


>gi|257883085|ref|ZP_05662738.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,502]
 gi|257818743|gb|EEV46071.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,502]
          Length = 435

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|228991455|ref|ZP_04151407.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
 gi|228768257|gb|EEM16868.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
          Length = 329

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 11/274 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   L  +  A+L   F F     + K     L+D  +  ++ +   D P++ ASL+K+M
Sbjct: 1   MLLILSFLITAILVFYFYFYVNGPSIKAKSAILIDATSEEIVYKKNEDTPFSSASLSKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+V   +++ K      + IS ++ +   +N        +T+ +    +++ S N  A
Sbjct: 61  TEYIVLEQIQKGKIKWDDRVKISNSSIQMEGNNIDITFEDQITIRDLFHAMVLASDNSAA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQHGHYT--TARDMAILSWRI 177
           V +AE + K+E+ F   MN  +  LGLS  T+F NA GV+     +  TA D + L+  +
Sbjct: 121 VFLAEHISKSEQDFTNLMNEKATQLGLSNKTYFANATGVINKQKESKITALDASKLAQHL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIV 229
            TD+P  +   Q+   +   K     N     +         G DG++T F+  +G++  
Sbjct: 181 ITDYPMILEITQLTSYQFTFKDIHVFNTNKMLYSLDSKIKFKGVDGLQTSFSNPAGYSFA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           ++A QG++  I++++ A   N+    +  L + G
Sbjct: 241 STAKQGNKRFISIVMEANGENSAFIETKKLFTYG 274


>gi|317470930|ref|ZP_07930309.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
 gi|316901581|gb|EFV23516.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
          Length = 374

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 33/300 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAENY 46
           ++ LV++  A+L       + A                +       L+D  TG ++    
Sbjct: 6   KRLLVMLTAAVLVTAGTVPAKAAERGLATKEDTNADKPSINGVCGILMDAKTGKILYAKN 65

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMT 103
            D    PAS+TK++T  V           L + +  S++A         +   K G  + 
Sbjct: 66  IDKKSYPASITKILTTLVAIENND----DLYSTVKFSRHAVNSIEPGSTHIGIKAGEEIP 121

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           L + L  ++++SAN+    +AE    + +KF   MN  +K +G   +HFMN +G+    H
Sbjct: 122 LMDVLYGIMLESANEACNGVAEHTSGSIEKFADLMNKKAKEIGCKGSHFMNPNGLHNDKH 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK------YPNTNWA----VGTFLGA 213
           Y TARDMA+++     +                  K        N +      +  + G 
Sbjct: 182 YVTARDMALITKAALQNPMFRKIACSSHYFMSGTNKEKKGRELWNHHKMVKQTMFLYKGV 241

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           +G KTG+T  +G  +V  A +G+  LI+VIL         + +  L   GF N       
Sbjct: 242 EGGKTGYTTRAGGTLVTFAKRGETELISVILRGNGYEL-YRDTIKLFDYGFKNYKSVAPF 300


>gi|157692820|ref|YP_001487282.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
 gi|157681578|gb|ABV62722.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
          Length = 385

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 70/327 (21%), Positives = 134/327 (40%), Gaps = 16/327 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            +      ++ +       L+D  +G V+           AS+TK+MTA +     K K 
Sbjct: 22  FSSHAKADVSLSVSARSAILIDGQSGRVLFGKDEHEKRRIASITKIMTAVLAIESGKMK- 80

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 + +SK A +   S+   K+G  ++L++    L+++S ND AVAIAE +  + + 
Sbjct: 81  ----DTVKVSKRAIQAEGSSIYLKEGQKVSLEDLTYGLMLRSGNDAAVAIAEHVGGSLEG 136

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F+  MN  +  LG+  T+F N HG+  H ++ ++     +  R   +  QY         
Sbjct: 137 FIFMMNQKASELGMENTNFQNPHGLDDHKNHYSSAYDMAILTRYAMEHKQYQKIAGTTFY 196

Query: 194 EIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           + K  +    N      G +  + G KTG+T  +   +V++A +G+ +LIAV + A D  
Sbjct: 197 KAKTMEGYWKNKNKLLTGLYQYSTGGKTGYTKLAKRTLVSTAAKGNAALIAVTINAPDD- 255

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV----CTTQKEIINY 306
              K   S+    F +               +     +   I  +V       +K+++  
Sbjct: 256 --WKDHISMFEYAFDHYKTYVLAEKGRLASLKGTFYEKKAFIKRDVDYFLNEDEKKLVEI 313

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNKI 333
            T+M   + K +   +     ++    
Sbjct: 314 ETEMLTPQKKWAKNAEAIP-DVVGKMT 339


>gi|260683741|ref|YP_003215026.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CD196]
 gi|260687401|ref|YP_003218535.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
 gi|260209904|emb|CBA63846.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CD196]
 gi|260213418|emb|CBE05068.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
          Length = 397

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 80/358 (22%), Positives = 153/358 (42%), Gaps = 30/358 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 8   LKKIISLAMILVFIIPNYSYADGKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 68  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 128 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 187

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +   + + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 188 DIAILGKYMFDHYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 247

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 248 YCLSFSMVVNKNEKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 307

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              K               +E+ T  K+  +  +++K      +     +K   +   
Sbjct: 308 IGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIK----NIEYPVKKGDTMGVI 361


>gi|229109023|ref|ZP_04238624.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|229126883|ref|ZP_04255895.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|228656823|gb|EEL12649.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|228674492|gb|EEL29735.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
          Length = 363

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 79/308 (25%), Positives = 120/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 18  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 72

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 73  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNQKAKE 132

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 133 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 191

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +G   LI V L A           +L 
Sbjct: 192 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKGGLDLIVVTLSASSD---WDDHMNLF 248

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K   DK +  
Sbjct: 249 DKGFDRFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEEKKNVVLKVELDKSTKL 308

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 309 TDGVKVGK 316


>gi|325123015|gb|ADY82538.1| putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 440

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 84/302 (27%), Positives = 143/302 (47%), Gaps = 9/302 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           I    L+N        E+ +   +T++DT +G +IAE+       PASLTK+M AY+   
Sbjct: 14  IFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPASLTKMMVAYIALK 73

Query: 68  FLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
            +K  K      IT +   +  ++  S    K G  +++D  L  LIV SAND AV +AE
Sbjct: 74  EIKAGKLKKEEIITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIVMSANDAAVTLAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +     +FVQ MN  ++ LG+  THF N  G+    H+TTA D+++LS  +    P+Y+
Sbjct: 134 KISGDVPRFVQRMNQEAQALGMKDTHFSNPAGITMPDHFTTAHDLSLLSQALIKQTPEYL 193

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-------DQS 238
           HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A +         + 
Sbjct: 194 HYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTASRPSFSSDLTQRR 253

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L+ ++LG      R +++  L+++ +    D   I           + + +     E   
Sbjct: 254 LLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVIIPEQKLIAELPVVKSTLKMFKVETKQ 313

Query: 299 TQ 300
             
Sbjct: 314 PT 315


>gi|294623044|ref|ZP_06701933.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium U0317]
 gi|291597600|gb|EFF28762.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium U0317]
          Length = 435

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTVENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|325292852|ref|YP_004278716.1| D-alanyl-D-alanine carboxypeptidase [Agrobacterium sp. H13-3]
 gi|325060705|gb|ADY64396.1| D-alanyl-D-alanine carboxypeptidase [Agrobacterium sp. H13-3]
          Length = 390

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 121/326 (37%), Gaps = 10/326 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +     K     ++D  TG V+     +  + PASL KLMT  V+   L + + 
Sbjct: 26  AQAQTQTAPFIAKAEQAYMIDAETGTVLLSQNENQSFPPASLAKLMTVEVILDALAKGQV 85

Query: 75  MLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              T   +S+ A          S       S++++++ L  +IV++AND  + +AE +  
Sbjct: 86  TPETAYPVSEYAWRTGGAPSRTSTMFAALKSSVSVNDLLTGIIVQNANDGCIIVAEGMAG 145

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++  F + M   +  LG++ + F N+ G+   G+ TTA+DM +L+  ++  +P     F 
Sbjct: 146 SDSAFAKRMTVRAGELGMNRSVFANSTGLPDPGNQTTAKDMVLLAQHLRDTYPDRYGLFT 205

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
               E       N N  +G   G DG+  GF   SGF  V SA +  + +   +    D 
Sbjct: 206 KPDFEWNRIFQRNKNSLLG--NGIDGLGLGFAEGSGFAAVVSAEREGRRVYLALGSIADD 263

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIK---DFYQQNLSNEVPNISEEVCTTQKEIINY 306
            TR   +  ++  G      R                   + +     E  +    + N 
Sbjct: 264 KTRQDEARRVVDWGLTAFEKRHLFAKDEAVGSVSVYGGDVSHIDLSPREDVSVLVPVNNP 323

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNK 332
                    +       +    +   
Sbjct: 324 ERISGRIVYRWPLNAPLDTGANVGTL 349


>gi|255656129|ref|ZP_05401538.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-23m63]
          Length = 394

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 80/356 (22%), Positives = 154/356 (43%), Gaps = 30/356 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 5   LKKIISLAMILVFIIPNYSYADDKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 64

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 65  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 124

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 125 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 184

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +  ++ + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 185 DIAILGKYMFDNYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 244

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 245 YCLSFSMVVNKNDKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 304

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              K               +E+ T  K+  +  +++K      +     +K   + 
Sbjct: 305 IGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIK----NIEYPVKKGDTMG 356


>gi|223889041|ref|ZP_03623632.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi 64b]
 gi|223885857|gb|EEF56956.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi 64b]
          Length = 388

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 84/351 (23%), Positives = 136/351 (38%), Gaps = 28/351 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M   L +I      N+F          +       L+D +T  ++    P+  + PASLT
Sbjct: 1   MLLTLFLIFFPFCYNLFAVNLAEINKLSEYAKSIVLMDFDTKRILYSKKPNLVFPPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN----STFKKGSTMTLDNALKLLIV 113
           K++T Y      +++   L + + IS +AS Y           +KG  +  +  LK L V
Sbjct: 61  KIVTIYTALIEAEKRNIKLKSIVPISDSASYYNAPPNSSLMFLEKGQIVNFEEILKGLSV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND ++AIAE +      FV  MN    NLGL   HF+   G     +  TA DMA  
Sbjct: 121 SSGNDSSIAIAEFVVGNLNSFVNLMNINVLNLGLFNMHFVEPSG-YSSENKITALDMAFF 179

Query: 174 SWRIKTDFPQYMHYFQIKGL--------------EIKGKKYPNTNWAVGTFLGADGMKTG 219
                  F   ++   +K                +    K  N N  +  +  +DG+KTG
Sbjct: 180 VKSYIEKFKFMLNIHSLKYFIYPKSRNLGTALSSKFLNLKQRNANLLIYDYPYSDGIKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILG------ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           +   SG N+VA+A +G++ LIAV+LG            R+ ++ +L   GF   +    I
Sbjct: 240 YIKESGLNLVATAKKGERRLIAVVLGVEKGINGFGEKMRSSIAKNLFEYGFNKYSKFPLI 299

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
             + +  Y   +        E       +       +    DK    +  +
Sbjct: 300 VKLKEKVYNGTVDTVALFSKEPFYYILTKDEFDKINISYTVDKLVAPLSGD 350


>gi|196231311|ref|ZP_03130170.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chthoniobacter flavus
           Ellin428]
 gi|196224647|gb|EDY19158.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chthoniobacter flavus
           Ellin428]
          Length = 295

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 11/254 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
            FP              LLD  TG +I E   D     AS  KL+T+ +V          
Sbjct: 48  AFPVADGVPKITAGSAILLDAKTGKIIFEMNADQRRPVASTQKLLTSLIVAE-----TGD 102

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   + +  + +   P+    K G+  +  + L +L+V S ND+A A+A     + + F 
Sbjct: 103 LDHKVHVEASDTWAEPTMLYIKPGNVYSRYDFLNVLLVHSMNDVARALARDNAGSLENFA 162

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIK 191
             MN  +  LG+  ++F+N +G+   G Y+TARDMA +                      
Sbjct: 163 ARMNAKASELGMRNSNFVNPNGLPIPGQYSTARDMAQVALAAYRNPIIRGIVCQKSVTWH 222

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
             + + + +  TN  +  +   +GMKTG+T A+G  +++SA    + +IAV+LG  D   
Sbjct: 223 YNDGRVRVFETTNQVLKRYPLCNGMKTGYTEAAGHCLISSASHNGRDVIAVVLG--DNKN 280

Query: 252 RNKVSASLLSMGFY 265
               S  LL+ G  
Sbjct: 281 IWNDSYKLLAFGLS 294


>gi|294620209|ref|ZP_06699543.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1679]
 gi|314940169|ref|ZP_07847347.1| beta-lactamase [Enterococcus faecium TX0133a04]
 gi|314942414|ref|ZP_07849257.1| beta-lactamase [Enterococcus faecium TX0133C]
 gi|314952310|ref|ZP_07855321.1| beta-lactamase [Enterococcus faecium TX0133A]
 gi|314994247|ref|ZP_07859550.1| beta-lactamase [Enterococcus faecium TX0133B]
 gi|314997162|ref|ZP_07862148.1| beta-lactamase [Enterococcus faecium TX0133a01]
 gi|291593562|gb|EFF25102.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium E1679]
 gi|313588736|gb|EFR67581.1| beta-lactamase [Enterococcus faecium TX0133a01]
 gi|313591334|gb|EFR70179.1| beta-lactamase [Enterococcus faecium TX0133B]
 gi|313595569|gb|EFR74414.1| beta-lactamase [Enterococcus faecium TX0133A]
 gi|313598814|gb|EFR77659.1| beta-lactamase [Enterococcus faecium TX0133C]
 gi|313640608|gb|EFS05188.1| beta-lactamase [Enterococcus faecium TX0133a04]
          Length = 435

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|296450439|ref|ZP_06892195.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP08]
 gi|296879438|ref|ZP_06903432.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP07]
 gi|296260700|gb|EFH07539.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP08]
 gi|296429584|gb|EFH15437.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP07]
          Length = 397

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 80/356 (22%), Positives = 154/356 (43%), Gaps = 30/356 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 8   LKKIISLAMILVFIIPNYSYADDKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 68  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 128 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 187

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +  ++ + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 188 DIAILGKYMFDNYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 247

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 248 YCLSFSMVVNKNDKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 307

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              K               +E+ T  K+  +  +++K      +     +K   + 
Sbjct: 308 IGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIK----NIEYPVKKGDTMG 359


>gi|118471047|ref|YP_886038.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172334|gb|ABK73230.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 397

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 108/283 (38%), Gaps = 11/283 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        + E      + + D +TG VIA   P     PAS+ K++TA    +     
Sbjct: 76  VITAPNTPPVPEDVSAEAWIVADMDTGDVIAARDPHGRHRPASIIKVLTATAALNE---- 131

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  +++ +    +      G   T+++ L  L++ S ND A A+A        
Sbjct: 132 -LNLNKRVAGTQDDANAEGTRVGVGPGGQYTINDLLHGLLMYSGNDAAHALAM-QLGGWD 189

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYF 188
             +Q +N  +  LG   T      G+   G  T+A D+A+       +       +   +
Sbjct: 190 PALQKLNTLAAKLGGRDTRAATPSGLDGPGMSTSAYDIALFYRYAWQNPVFADIVHTQSY 249

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GAL 247
           Q  G +       N N  +  + GA G KTG+T  +G   V +A +  + LIAV+L G  
Sbjct: 250 QFPGRDGGSYPIENDNKLLANYPGALGGKTGYTDDAGQTFVGAAERDGRRLIAVLLKGTR 309

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
                 + +A LL  GF      K    +  D        E P
Sbjct: 310 VPIAPWEQAARLLDYGFATPPGTKVGTLVDPDPSLAPKQAEEP 352


>gi|308174109|ref|YP_003920814.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307606973|emb|CBI43344.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552762|gb|AEB23254.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
           TA208]
 gi|328912440|gb|AEB64036.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*)
           [Bacillus amyloliquefaciens LL3]
          Length = 383

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 11/318 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL+   +                      L+D  +G V+      H    AS+TK+MTA 
Sbjct: 10  FLLTFVILFSITDGNTAHAQIHVSAKSAILIDGTSGRVLFAKDEHHKRRIASITKIMTAV 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     K +K      +T+S NA +   S    + G  + L + +  L+++S ND A AI
Sbjct: 70  LAIESGKMEK-----TVTVSPNAVKTEGSAIYLQPGQKVKLKDLVYGLMLRSGNDAAAAI 124

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +   FV  MN  ++ +G+  T F N HG+  H +  +      L  +      +
Sbjct: 125 AEYVGGSLDGFVFMMNQKAEQIGMENTKFQNPHGLDDHENLYSTAYDMALLTKYAMKIKE 184

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           Y      K  + +       N      G +  + G KTG+T  +   +V++A +    LI
Sbjct: 185 YRTVSGTKVYKAETMDRVWKNKNKLLTGLYPYSTGGKTGYTKIAKRTLVSTASKDGTDLI 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV +   D         ++ +  F N               ++    +   I+ +V    
Sbjct: 245 AVTINDPDD---WDDHMNMFNYVFENYKTYVVAKKGGIPKLKKTFYGKHAFITRDVKYLL 301

Query: 301 KEIINYNTQMKEAKDKES 318
           KE    + ++     K  
Sbjct: 302 KEDEIDDVKISTTLIKPK 319


>gi|229016825|ref|ZP_04173754.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
 gi|229023030|ref|ZP_04179546.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228738278|gb|EEL88758.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228744477|gb|EEL94550.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
          Length = 362

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 76/307 (24%), Positives = 121/307 (39%), Gaps = 13/307 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L++  +G V+       P   AS+TK+MTA +     K K+      +++S  
Sbjct: 18  VSARNAVLMEQQSGRVLYGKLEHEPQKIASITKIMTALLAAESGKMKEL-----VSVSNE 72

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     S    K G  + L++ +  L+++S ND A  IAE++  + + FV  MN  +K +
Sbjct: 73  AVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVGGSIEGFVYLMNEKAKEI 132

Query: 146 GLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  N
Sbjct: 133 GMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWKN 191

Query: 205 WAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
                   +  A G KTGFT  +G  +V +A +    LI V L A           +L  
Sbjct: 192 KHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLFD 248

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
            GF +      +         +                  E    +  +K   DK +   
Sbjct: 249 KGFEHFKQTTVLGQGALAEINEKKYANHVYTKNSFSVPLTEEERKSVLLKVELDKSAKLT 308

Query: 322 DFEKITL 328
           D  KI  
Sbjct: 309 DGVKIGK 315


>gi|238019958|ref|ZP_04600384.1| hypothetical protein VEIDISOL_01834 [Veillonella dispar ATCC 17748]
 gi|237863482|gb|EEP64772.1| hypothetical protein VEIDISOL_01834 [Veillonella dispar ATCC 17748]
          Length = 285

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 16/275 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +++ +++IA      +   +S        +       L+D +T  ++    PD   +PAS
Sbjct: 12  LKRLILMIAFIGAVILGASISHAAYIAPPSTVGEAVVLIDADTKEILFAKNPDKWMHPAS 71

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            TK++T          K   L    TIS  A+    SN   + G  +TL+  L+ ++V S
Sbjct: 72  TTKMVTLLTALEL---KGTQLDELATISSYATSMEESNLGVRVGDQITLEGVLEGMMVAS 128

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-- 173
            ND AV +AE++  + + F + MN  +   G   + F+N HG+ Q GH++TARD+A++  
Sbjct: 129 GNDAAVVVAENVSGSVENFAKDMNRVAAKAGAKNSVFLNPHGLTQMGHHSTARDLAMIAA 188

Query: 174 --SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVA 230
                          Y+++       +    TN  +   + GA+G+KTGFT A+G  ++A
Sbjct: 189 YGMKYQMFRDKVANDYYKVPYQNRTPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIA 248

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           SA +   ++I V+L     + R   +   L  GF 
Sbjct: 249 SATRNGHTMIVVMLN---DDNRWDEAVQFLDYGFK 280


>gi|164686325|ref|ZP_02210355.1| hypothetical protein CLOBAR_02763 [Clostridium bartlettii DSM
           16795]
 gi|164601927|gb|EDQ95392.1| hypothetical protein CLOBAR_02763 [Clostridium bartlettii DSM
           16795]
          Length = 442

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 148/365 (40%), Gaps = 40/365 (10%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ +  + +                Y  ++D  TG V+     D    PAS TK+ TAY+
Sbjct: 1   MITLINSSIVAFADETYDNVDLMANYGVVIDYETGKVLGGKNIDSKVYPASTTKIWTAYL 60

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           V   +K     L  P+ I++       S+   + G   T+   L+ L++ S+ND AV +A
Sbjct: 61  VVKNVK----NLDEPVEITE-PPGVDGSSMYLEVGEIFTVRELLQGLLIHSSNDAAVVLA 115

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           + +  + + F Q MN  +K  G   THF N HG+    HYTT  DMA+L+ +  ++    
Sbjct: 116 KYVSGSTQDFAQLMNKEAKKAGALNTHFNNPHGLPDDNHYTTPYDMAMLARKAMSEKVIR 175

Query: 185 ---------MHYFQIKGLEIKGKKY-PNTNWA--------------VGTFLGADGMKTGF 220
                             +I   +Y  NTN                   +   DG+KTG+
Sbjct: 176 EIVSTKSISFKQQNTATSKINTSRYFTNTNLFLTSNDKITYRKQSIPIKYDIVDGIKTGY 235

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD- 279
           T  +G  +++SA++ D  +IA +  +   N     S +LL  GF N T +  IN      
Sbjct: 236 TDLAGRCLLSSAVKNDMRVIAAVFKSFGTNV-YVDSRTLLDYGFENYTSKTIINKDDYTK 294

Query: 280 -----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL----K 330
                F ++      P  S ++     E  N +   KE  D      + +K+  L     
Sbjct: 295 TKRVLFTKEKEFIYQPKSSYKLILKNGEAQNSDYTYKENLDYHLPIYEGDKVGTLDVYNG 354

Query: 331 NKITK 335
           NK+ K
Sbjct: 355 NKLEK 359


>gi|293553827|ref|ZP_06674442.1| D-alanyl-D-alanine carboxypeptidase DacA [Enterococcus faecium
           E1039]
 gi|291602033|gb|EFF32270.1| D-alanyl-D-alanine carboxypeptidase DacA [Enterococcus faecium
           E1039]
          Length = 435

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|89097521|ref|ZP_01170410.1| hypothetical protein B14911_28020 [Bacillus sp. NRRL B-14911]
 gi|89087817|gb|EAR66929.1| hypothetical protein B14911_28020 [Bacillus sp. NRRL B-14911]
          Length = 387

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 65/288 (22%), Positives = 117/288 (40%), Gaps = 17/288 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++FL  + + ML+      ++A              L+D+ +  ++          PAS
Sbjct: 1   MKKFLSALMVFMLTVHAGQSAVAKEEKEPAIVSEAAVLIDSQSNAILYSKNGSDRMYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+ TA             L   +T+S++A E   +    ++G   TL + ++ +++ S
Sbjct: 61  LTKIATAIYAIKK-----GNLDDMVTVSRSAVETEGTKVYLEEGEKTTLRHLIEGMLINS 115

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTS-KNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
            ND A AIAE +    +++ +++N    K + +  THF N HG+    HYTTA DMA+++
Sbjct: 116 GNDAAAAIAEHIDGNIEEYERNLNTFLEKEVHVHNTHFTNPHGLFDERHYTTAEDMALIT 175

Query: 175 WRIKTDFPQYMHY------FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
                +      Y      +  +  +     +         + G  G KTGF   S   +
Sbjct: 176 SYALKNNTFRTIYGTKELAWDGESWDTTIFTHHRMLKGEVPYTGITGGKTGFVNESKQTL 235

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
             SA  G   L A+++ A  +      + +L   GF            
Sbjct: 236 ATSAENGKIQLTAIVMKADFKRDIYNDTKTLFDYGFSRFKSSVISKET 283


>gi|229172207|ref|ZP_04299771.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
 gi|228611195|gb|EEK68453.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
          Length = 362

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 119/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 17  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAE++  + + FV  MN  +K 
Sbjct: 72  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVGGSIEGFVYLMNEKAKQ 131

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 132 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 190

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 191 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 247

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF        +         +                  E    N  +K   DK +  
Sbjct: 248 DKGFERFKQTNVVGQGALAEITEKKYANHVYTKNSFAVPLTEQERKNVVLKVELDKSAKL 307

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 308 KDGVKVGK 315


>gi|303228596|ref|ZP_07315422.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516688|gb|EFL58604.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 279

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 15/271 (5%)

Query: 4   FLVIIAMA----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           F++ +A      + +          +       L+D +   ++    PD   +PAS TK+
Sbjct: 10  FILALAFIGAMLLGTVAHGAAPTPPSTIGEAVVLIDADNKEILFAKNPDKWMHPASTTKM 69

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +T          K   L    TIS  A+    SN   + G  +TL+  L+ ++V S ND 
Sbjct: 70  VTLLTALEL---KGTQLDELATISPYATSMEESNLGVQVGDQITLEGVLEGMMVASGNDA 126

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SW 175
           AV +AE++  + + F + MN  +   G   + F+N HG+ Q GH++TARD+A++      
Sbjct: 127 AVVVAENVSGSVENFAKDMNRIAAKAGAKNSVFLNPHGLTQMGHHSTARDLALIAAYGMK 186

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQ 234
                      Y+++       +    TN  +   + GA+G+KTGFT A+G  ++ASA +
Sbjct: 187 YQMFRDKVANDYYKVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIASATR 246

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
              ++I V+L     + R   +   L  GF 
Sbjct: 247 NGHTMIVVMLN---DDNRWNEAVQFLDYGFK 274


>gi|253682141|ref|ZP_04862938.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum D
           str. 1873]
 gi|253561853|gb|EES91305.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum D
           str. 1873]
          Length = 377

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 76/346 (21%), Positives = 140/346 (40%), Gaps = 26/346 (7%)

Query: 1   MRQ---FLVIIAMAMLSNI-FPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDH 49
           M++     ++++M +L NI F +   A T               +D+ T  V+ E   D 
Sbjct: 1   MKKRILIFMVLSMCLLFNITFAYNVQAITPKNKLIYINARSAIAIDSKTKCVLYEKNSDM 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS TK+MT  V   +       L     +S  A+    S   +KKG +++L   L 
Sbjct: 61  LLPIASTTKIMTTLVALKY-----GNLDDKFEVSSKAANIRGSQVGYKKGESISLKELLY 115

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+++S ND A+ IAE L  + +KF + MN  +  +G   +HF + HG+    HY+TA D
Sbjct: 116 GLMLRSGNDAAITIAEGLSGSVEKFCELMNEYAVEIGALNSHFESPHGLDSQNHYSTAYD 175

Query: 170 MAILSW----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +A ++         +    +   + K      + Y N N  +     A+G+KTG+T  +G
Sbjct: 176 LARITAKAKENELFNKIVAVKDVEAKEYGF-TRSYHNINKILYQIPNANGVKTGYTGGAG 234

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK--DFYQQ 283
             +V S    D  +I V+L       R K +  +      N   +K  +      +    
Sbjct: 235 KCLVTSVKDNDDDIIIVVLNCT---PRWKETGKIYKFVKENYDFKKITSKNQVIGNIIYN 291

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                    ++++     +  +   ++ + K   S+      +  +
Sbjct: 292 GNKKIDLICNKDIVVPVGKQEHCEFKIVKPKSIPSNVYKGMDLGKI 337


>gi|228996680|ref|ZP_04156317.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|228762999|gb|EEM11909.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
          Length = 361

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 80/331 (24%), Positives = 131/331 (39%), Gaps = 13/331 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           M          +           L++ ++G V+           AS+TK+MTA +     
Sbjct: 1   MCASVIPIHTYAQMNDVSAHNAILMEEHSGRVLYGKLEHESQKIASITKIMTALLAAESG 60

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K K+ +      IS  A     S    + G  + L++ +  L+++S ND A AIAE++  
Sbjct: 61  KMKEVVP-----ISDKAVRVEGSAIYLQPGKKVPLEDLVYGLMLRSGNDAAQAIAENVGG 115

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYF 188
           + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+     +   +   F
Sbjct: 116 SIEGFVYLMNEKAKQIGMKDTHFSNPHGLDGDGTHYSSAYDMALLTRYAMGN-ETFRKIF 174

Query: 189 QIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             K  + K   YP  N        +  A G KTGFT  +G  +V +A +    LI V L 
Sbjct: 175 GTKTYQSKMWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLN 234

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
           A +          L   GF      K +        Q+        I  +      +   
Sbjct: 235 ASND---WDDHMYLFDQGFKQYELTKVLRQGALSGLQEKKYTNHVYIKNDFAIPLTKDEK 291

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               +K   D+ +  +D EK+      I ++
Sbjct: 292 KQVMLKVELDRSAKLVDGEKVGKTIVYINEE 322


>gi|283797579|ref|ZP_06346732.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
 gi|291074687|gb|EFE12051.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
          Length = 569

 Score =  145 bits (366), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 34/299 (11%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M+Q  +  I+   + + +    + A        + +     ++D ++G V+        +
Sbjct: 1   MKQKFIRTILCFFLTAAVSAHPAYASQEWPSDVSIEADAGIVMDADSGTVLYGKNIHDTY 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNAL 108
           +PAS+TK++T+ +V          L   +T SKNA        S++ +  G   T+ + L
Sbjct: 61  SPASITKVLTSIIVLENCD-----LDEMVTFSKNAIYNVEADSSSAGYDTGDQATVRDCL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             L++KSAN+ A A+AE +  T + F + MN  +K LG   +HF N  G+    HY +A 
Sbjct: 116 YALLLKSANEAANALAEHVAGTTEAFAEMMNEKAKELGCVDSHFANPSGLNDENHYVSAY 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKG-------------KKYPNTNWAVGTFLGADG 215
           DMA+++     +   +         E+                K    N+         G
Sbjct: 176 DMALITRY-AFENEIFEEIISTTYYELPPNARNPEGLGVSPGNKLIKKNFPEYR-PDVIG 233

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            KTG+T  +   +V  A Q D +LI V+L +         ++ +L  GF N       N
Sbjct: 234 GKTGYTSIALNTLVTGARQDDTTLITVVLHSRGTT--YSDTSRMLDFGFGNFRSVSLEN 290


>gi|240146057|ref|ZP_04744658.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
 gi|257201873|gb|EEV00158.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
          Length = 414

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 129/346 (37%), Gaps = 34/346 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                  +       L+D ++G ++ E         AS TK++T  +           L 
Sbjct: 38  TEKPDQNSLYAKAAVLMDADSGRILYEKNGHQAMANASTTKILTCIIALENCD-----LD 92

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           + +T+S  A+  P  +   ++G    L + L  L+++S ND AVAIAE +  T   F + 
Sbjct: 93  SEVTVSTLAASQPKVHLGMREGQKFYLKDLLYGLMLESYNDCAVAIAEHIAGTTGDFAKL 152

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           MN+ ++ +G   ++F+  +G+        H+TTA D++++             +  I   
Sbjct: 153 MNDKAEEIGCEDSYFITPNGLDAKNENGFHHTTAADLSLIMRYCIKTSEMAEQFLTITRE 212

Query: 194 EI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                            N N  +    GA   KTGFT  +G+  V +  + D++ I  +L
Sbjct: 213 GQYQFSDIDGKNSYTCCNHNAFLQMMDGALSGKTGFTGNAGYCYVGALKRDDRTFIVALL 272

Query: 245 GALDRNT---RNKVSASLLSMG---FYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
                N    +   +  L+  G   F   +  +      +    Q +  +   I EEV T
Sbjct: 273 ACGWPNNKTYKWADTKKLMQYGISRFRKISLDEIELDAGEYAPVQVVDGQGTKIGEEVTT 332

Query: 299 -TQKEIINYNTQMKEAKDKESHF---------IDFEKITLLKNKIT 334
             +   +  N ++   KD+E H              +   +     
Sbjct: 333 ELEVAPVKENVELLIEKDQEVHIEYQLSRKLYAPVTEGDFIGEITY 378


>gi|160937986|ref|ZP_02085343.1| hypothetical protein CLOBOL_02879 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438980|gb|EDP16735.1| hypothetical protein CLOBOL_02879 [Clostridium bolteae ATCC
           BAA-613]
          Length = 492

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 68/341 (19%), Positives = 130/341 (38%), Gaps = 24/341 (7%)

Query: 1   MRQFLVII-AMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR+   II ++ M+ ++    + A+         +     ++D ++G V+          
Sbjct: 15  MRRISYIITSLIMVFSMATITAFAKPDWPIDTGIQSEAGIVMDMDSGAVLFAQNIHEQKI 74

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS+TKL+TA VV     +  A +T       N      +    ++G  +++   L  ++
Sbjct: 75  PASITKLLTALVVIENTNDLDAPVTFSHDAIYNVESGAGNKFNLEEGDVLSVRQCLYAML 134

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S+N  A A+AE +  + + FV  MN     LG + +HF N  G+      TTA DMAI
Sbjct: 135 LQSSNQSANALAEYVAGSRQAFVDMMNQRIAELGCNESHFANPSGLNDDTQRTTAYDMAI 194

Query: 173 LSWRIKTDFPQ------YMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFT 221
           ++     +                      G+ +   +          +  A   KTG+T
Sbjct: 195 IARACFQNPTVLEIASARTSTIPATANNPNGRTFSIEHKMLLSDDSNYYPDAIAGKTGWT 254

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G  +V  A +  +  IAV L +  + T    + ++L   F    +    +    +  
Sbjct: 255 SQAGQTLVTYARREGRGQIAVTLKS-TQKTHYSDTKTILDFCFAKFKNVNIAD----NEI 309

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           +    +    I+ E     +  I     +    D +    D
Sbjct: 310 EYVTGDTPVTIAGETYDPSELSIESGAVITIPNDAQFTDAD 350


>gi|255307153|ref|ZP_05351324.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile ATCC
           43255]
          Length = 394

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 30/356 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 5   LKKIISLAMILVFIIPNYSYADDKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 64

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 65  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 124

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 125 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 184

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +   + + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 185 DIAILGKYMFDHYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 244

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 245 YCLSFSMVVNKNDKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 304

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              K               +E+ T  K+  +  +++K      +     +K   + 
Sbjct: 305 IGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIK----NIEYPVKKGDTMG 356


>gi|298251261|ref|ZP_06975064.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297545853|gb|EFH79721.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 338

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 16/265 (6%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           ++   +  A         LLDT+TG+V+ +   + P   AS TK+MTA VV      K+ 
Sbjct: 67  SVLTVVGGAPPIDAKAAYLLDTDTGNVLDDQNAEQPLPMASTTKIMTALVVIEAANLKQ- 125

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            +T    I +   ++  SN+    G T+T+++ L  L++ S +D A+ +A ++  +   F
Sbjct: 126 EVTVSPDIPQYVFQHNGSNAKLVPGDTLTINDLLYALMLPSGDDAAIVLARAVAGSSDAF 185

Query: 135 VQHMNNTSKNLGLSATHFMNAHGV--------VQHGHYTTARDMAILSWRIKTDFPQ--- 183
           V  MN  +    L  THF+N  G+           GHY++ARD+A L+    ++      
Sbjct: 186 VGMMNCFALRHHLFQTHFINPDGLTYYDANGKPLPGHYSSARDLARLTAYALSNPLFAKI 245

Query: 184 --YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                Y      +     + NTN     +    G+KTGFT  +G+ +V SA +    L+ 
Sbjct: 246 VGTRQYDLAWSPKHGAYHWTNTNDLFNLYPATTGVKTGFTNEAGYCLVFSATRDHHHLVG 305

Query: 242 VILGAL--DRNTRNKVSASLLSMGF 264
            +L +   D N R + + +LL  GF
Sbjct: 306 TVLFSSDTDTNQRFRDAKTLLEWGF 330


>gi|295089928|emb|CBK76035.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cf.
           saccharolyticum K10]
          Length = 569

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 34/299 (11%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M+Q  +  I+   + + +    + A        + +     ++D ++G V+        +
Sbjct: 1   MKQKFIRTILCFFLTAAVSAHPAYASQEWPSDVSIEADAGIVMDADSGTVLYGKNIHDTY 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNAL 108
           +PAS+TK++T+ +V          L   +T SKNA        S++ +  G   T+ + L
Sbjct: 61  SPASITKVLTSIIVLENCD-----LDEMVTFSKNAVYNVEADSSSAGYDTGDQATVRDCL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             L++KSAN+ A A+AE +  T + F + MN  +K LG   +HF N  G+    HY +A 
Sbjct: 116 YALLLKSANEAANALAEHVAGTTEAFAEMMNEKAKELGCVDSHFANPSGLNDENHYVSAY 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKG-------------KKYPNTNWAVGTFLGADG 215
           DMA+++     +   +         E+                K    N+         G
Sbjct: 176 DMALITRY-AFENEIFEEIISTTYYELPPNARNPEGLGVSPGNKLIKKNFPEYR-PDVIG 233

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            KTG+T  +   +V  A Q D +LI V+L +         ++ +L  GF N       N
Sbjct: 234 GKTGYTSIALNTLVTGARQDDTTLITVVLHSRGTT--YSDTSRMLDFGFGNFRSVSLEN 290


>gi|295115036|emb|CBL35883.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SM4/1]
          Length = 569

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 34/299 (11%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M+Q  +  I+   + + +    + A        + +     ++D ++G V+        +
Sbjct: 1   MKQKFIRTILCFFLTAAVSAHPAYASQEWPSDVSIEADAGIVMDADSGTVLYGKNIHDTY 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNAL 108
           +PAS+TK++T+ +V          L   +T SKNA        S++ +  G   T+ + L
Sbjct: 61  SPASITKVLTSIIVLENCD-----LDEMVTFSKNAVYNVEADSSSAGYDTGDQATVRDCL 115

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             L++KSAN+ A A+AE +  T + F + MN  +K LG   +HF N  G+    HY +A 
Sbjct: 116 YALLLKSANEAANALAEHVAGTTEAFAEMMNEKAKELGCVDSHFANPSGLNDENHYVSAY 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKG-------------KKYPNTNWAVGTFLGADG 215
           DMA+++     +   +         E+                K    N+         G
Sbjct: 176 DMALITRY-AFENEIFEEIISTTYYELPPNARNPEGLGVSPGNKLIKKNFPEYR-PDVIG 233

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            KTG+T  +   +V  A Q D +LI V+L +         ++ +L  GF N       N
Sbjct: 234 GKTGYTSIALNTLVTGARQDDTTLITVVLHSRGTT--YSDTSRMLDFGFGNFRSVSLEN 290


>gi|257898083|ref|ZP_05677736.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium Com15]
 gi|257835995|gb|EEV61069.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium Com15]
          Length = 435

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSVTPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+  +     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWDIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +A L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETARLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|126699758|ref|YP_001088655.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile 630]
 gi|115251195|emb|CAJ69026.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium difficile]
          Length = 397

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 30/356 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 8   LKKIISLAMILVFIIPNYSYADDKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 67

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 68  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 128 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 187

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +   + + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 188 DIAILGKYMFDHYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 247

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 248 YCLSFSMVVNKNDKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 307

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
              K               +E+ T  K+  +  +++K      +     +K   + 
Sbjct: 308 IGKKYIKGMKELEVTLKAKDELYTILKDDESIKSEVKIK----NIEYPVKKGDTMG 359


>gi|319405647|emb|CBI79270.1| Penicillin-binding protein [Bartonella sp. AR 15-3]
          Length = 390

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 81/352 (23%), Positives = 140/352 (39%), Gaps = 21/352 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   + +L       +           + D NT  ++ E   D  + PASL KLMTA V
Sbjct: 7   VLFSLVWILVFNEQGQTKKFQTSALQLLIFDDNTDTILFEKQSDVVFFPASLVKLMTAEV 66

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  LK+     T    +S+NA          +    K+ + +++ + L+ LI+ + ND 
Sbjct: 67  VFYQLKKGFLNKTQKFKVSENAWRKGGAPSGTTTMFAKEKTEISVFDLLRGLIIVNGNDA 126

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ +AE +   E  F + MN  +K LGL  +HF+NA G+ + G + T RD+  L+  I  
Sbjct: 127 AITLAEGIAGNEANFAKLMNKRAKTLGLLQSHFVNATGLPEKGQFITLRDIITLARHISR 186

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           ++P Y   ++            N N        +  +G+  G++   GF+ V SA +  +
Sbjct: 187 EYPDYYALYREPKFTWNKITQHNKNSLLFQENDIEIEGLGFGYSEEIGFSTVVSACKKQR 246

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY---QQNLSNEVPNI-- 292
            +   + G  ++  R K    +L         +          Y        N VP I  
Sbjct: 247 RIFLAVNGLQNKKERTKEIERILEWAMTAFDLKTVFTRGETVGYASVYGGAQNSVPLIVK 306

Query: 293 --------SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                    ++     K II Y+  +K         I   +I   K  + +K
Sbjct: 307 EPISFMLSKQKTFNDVKAIIQYHGPLKAPITI-GEKIGIIQIFSDKQLLVEK 357


>gi|163943071|ref|YP_001647955.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163865268|gb|ABY46327.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 423

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 82/332 (24%), Positives = 133/332 (40%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T +TIS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVIYAVLEAIKEGKITWDTKVTISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ GADG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFSYEGADGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S +L+  GF N   +K    K N I     +++     P     V TT+    +Y
Sbjct: 283 ERFTESRALIEYGFNNFEKQKLKIDKNNKISVVKGKEDYVTVAPEKEVTVVTTKGSKSSY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + + + +
Sbjct: 343 KISTEADKSLAEDGHLVAPIKKDAKVGSIVLE 374


>gi|228900148|ref|ZP_04064381.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
 gi|228859554|gb|EEN03981.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
          Length = 362

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 78/308 (25%), Positives = 118/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 17  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 72  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNEKAKE 131

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 132 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGNES-FKKIFGTKTYKSDSWDYPWK 190

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 191 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 247

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K   DK    
Sbjct: 248 DKGFERFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEERKNVLLKVELDKSITL 307

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 308 EDGVKVGK 315


>gi|291543602|emb|CBL16711.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. 18P13]
          Length = 376

 Score =  145 bits (365), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 78/318 (24%), Positives = 127/318 (39%), Gaps = 3/318 (0%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            P    A       Y LL+  TG ++ E          ++ KLMT  +    L+      
Sbjct: 20  LPEPGAAAGKPCRAYALLEARTGQLLLEENSSESLPMGTMAKLMTMLLTAEALESGALSE 79

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T +T S  A+    ++     G  MT+ + L+ +I+ +AND AVA+AE++  TE++FV 
Sbjct: 80  NTAVTASPAANAQKGASIWLMPGEKMTVGDLLRGMIIGNANDAAVALAEAVSGTEEQFVM 139

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI-LSWRIKTDFPQYMHYFQIKGLEI 195
            MN     LGL +T F  A G+ + G  TTA D+        +              L  
Sbjct: 140 DMNARGFELGLRSTVFTCASGLSEEGQVTTAADLGRLCCKLTEYPVLTPYMTTWRTFLRG 199

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           +  +  N N  V ++ G  GMK G    +G+ + A+A +GD   +AV+LG  +   R  +
Sbjct: 200 EQTELVNENTLVRSYDGLLGMKAGHGERTGYTLAAAAQRGDGIYVAVVLGCQEDADRFSI 259

Query: 256 SASLLSMGFYNK--TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           + +LLS GF +   T        +K     + ++    +  +  T               
Sbjct: 260 AKTLLSKGFGSYQVTTPAFSGEFLKPLQVLHGTDTAVEVEAQGLTGITVPKGNAGLQTVL 319

Query: 314 KDKESHFIDFEKITLLKN 331
              E       K   L  
Sbjct: 320 VLPEYVEAPVSKGQQLGT 337


>gi|194016923|ref|ZP_03055536.1| D-alanyl-D-alanine carboxypeptidase DacB (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 5*)
           (PBP-5*) [Bacillus pumilus ATCC 7061]
 gi|194011529|gb|EDW21098.1| D-alanyl-D-alanine carboxypeptidase DacB (DD-peptidase)
           (DD-carboxypeptidase) (Penicillin-binding protein 5*)
           (PBP-5*) [Bacillus pumilus ATCC 7061]
          Length = 383

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 71/327 (21%), Positives = 133/327 (40%), Gaps = 16/327 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            +      ++ +       L+D  +G V+           AS+TK+MTA +     K K 
Sbjct: 20  FSSHAKADMSLSVSARSAILIDGQSGRVLFGKDEHEKRRIASITKIMTAVLAIESGKMK- 78

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 + +SK A +   S+   K+G  ++L++    L+++S ND AVAIAE +  + + 
Sbjct: 79  ----DTVKVSKRAIQAEGSSIYLKEGQKVSLEDLTYGLMLRSGNDAAVAIAEHVGGSLEG 134

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F+  MN  +  LG+  T+F N HG+  H H+ ++     +  +   +  QY         
Sbjct: 135 FIFMMNQKASELGMENTNFQNPHGLDDHKHHYSSAYDMAILTKYAMEHKQYQKIAGTTFY 194

Query: 194 EIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           + K  +    N      G +  + G KTG+T  +   +V++A +GD +LIAV + A D  
Sbjct: 195 KAKTMEGYWKNKNKLVTGLYKYSTGGKTGYTKLAKRTLVSTAAKGDAALIAVTINAPDD- 253

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV----CTTQKEIINY 306
              K   S+    F +               +     +   I  +V       +K+++  
Sbjct: 254 --WKDHISMFEYAFDHYKTYVLAEKGRLASLKGTFYEKKAFIKRDVDYFLNEDEKKLVEI 311

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNKI 333
            T+M   + K     +     ++    
Sbjct: 312 ETEMLTPQKKWKKNAEAIP-DVVGKMT 337


>gi|164687904|ref|ZP_02211932.1| hypothetical protein CLOBAR_01549 [Clostridium bartlettii DSM
           16795]
 gi|164602317|gb|EDQ95782.1| hypothetical protein CLOBAR_01549 [Clostridium bartlettii DSM
           16795]
          Length = 399

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/353 (22%), Positives = 144/353 (40%), Gaps = 24/353 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +  L+ I + + +                  L+D  T   + E  PD     ASL+K+MT
Sbjct: 10  KVLLLSIILNIFTTSISLAYDNIDRYSKGSILIDQLTNRTLYEKNPDKKMPLASLSKMMT 69

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +    +KE K      I I +  ++   S+   K G  + L   +  L++ S ND A+
Sbjct: 70  FLIAIESIKEGKVKENDIIEIDQEIAKVKGSSYKLKVGEKVPLIELMNGLMIVSGNDAAI 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDMA 171
           AIA+ +  +   FV+ MN  +K LG+  T F+N +G+  +           + +T RD++
Sbjct: 130 AIAKHIGGSVDDFVKIMNKKTKELGMKNTSFVNPNGLPIYSLKEPSKPPKENISTPRDIS 189

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           IL+  +  ++ + +     K +    ++     NTN  +      DG+KTG+T  +G+ +
Sbjct: 190 ILAKYMFDNYEKEVTSITDKQVYSYPERGFCKNNTNVLLQLIPDVDGVKTGYTGNAGYCL 249

Query: 229 VASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S           D  LI V+LG   +N R + S SLL  G  N   +        +  
Sbjct: 250 CFSMKTHKDDKNDCDNRLIGVVLGTNHKNKRTQASMSLLEYGKQNFKTKNIAQK--DELV 307

Query: 282 QQNLSNEVPNISEEVCTTQKEII--NYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +     +P++   +   +   I  N +  +K     +      ++  LL   
Sbjct: 308 GKKYICGIPDMEVTLKAEEALYIVCNEDEDIKSEVTLKEINYPIKQGELLGVI 360


>gi|291459956|ref|ZP_06599346.1| serine-type D-Ala-D-Ala carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417297|gb|EFE91016.1| serine-type D-Ala-D-Ala carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 509

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 22/280 (7%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
             +LS+       +         L+D +TG V+ E   +    PAS+TK+MTA VV    
Sbjct: 25  CFLLSSYAELSWPSADLTAVSAALMDADTGAVLFEKNGEQRMYPASITKVMTALVVLKHA 84

Query: 70  KEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                 L   ++ S +A     Y  SN+   +G  +T+ + L  L++KSAN+ A A+AE 
Sbjct: 85  -----NLEDQVSFSHDAVYNVDYGSSNAQIDEGDVLTVSDCLHALLLKSANEAANALAEH 139

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  + +KF + MN  +  LG S THF N  G+    HYTTA DMA++      D  +++ 
Sbjct: 140 VAGSREKFAEMMNEEAAALGCSGTHFSNPSGLFSEDHYTTAHDMALIGQAAFRD-KRFLD 198

Query: 187 YFQIKGLEIKGK-------KYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + K   +KG             +                 KTGFT  +G  ++  A  
Sbjct: 199 IEKEKSYTLKGCRRNPEGITIYMEHKMLLQNSPYYDERVVAGKTGFTKDAGNTLLTLAQS 258

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G + LIAV+LG          + +L  +GF    ++    
Sbjct: 259 GKRRLIAVVLGDKTPY-HYSDTRALFDLGFGQTENQPLAE 297


>gi|298246708|ref|ZP_06970513.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297549367|gb|EFH83233.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 338

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 16/265 (6%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           ++   +  A         LLD +TG+V+ +   + P   AS TK+MTA VV      KK 
Sbjct: 67  SVLTVMGGAPPIDAKAAYLLDIDTGNVLDDQNAEQPLPMASTTKIMTALVVIEAANLKKE 126

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             T    I +   ++  SN+    G T+T+++ L  L++ S +D A+ +A ++  +   F
Sbjct: 127 A-TVSPDIPQYVFQHNGSNAKLMPGDTLTINDLLYALMLPSGDDAAIVLARAVAGSSDAF 185

Query: 135 VQHMNNTSKNLGLSATHFMNAHGV--------VQHGHYTTARDMAILSWRIKTDFPQ--- 183
           V  MN  +    L  THF+N  G+           GHY++ARD+A L+    ++      
Sbjct: 186 VGMMNRFALRHHLFQTHFINPDGLTYYDANGNPLPGHYSSARDLARLTAYALSNPLFAKI 245

Query: 184 --YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                Y      +     + NTN     +    G+KTGFT  +G+ +V SA +    L+ 
Sbjct: 246 VGTRQYDLAWSPKHGAYHWANTNDLFNLYPATTGVKTGFTNEAGYCLVFSATRDHHHLVG 305

Query: 242 VILGAL--DRNTRNKVSASLLSMGF 264
            +L +   D N R + + +LL  GF
Sbjct: 306 TVLFSSNTDTNQRFRDAKTLLEWGF 330


>gi|225871199|ref|YP_002747146.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus equi subsp. equi
           4047]
 gi|225700603|emb|CAW95132.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus equi
           subsp. equi 4047]
          Length = 412

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 67/366 (18%), Positives = 145/366 (39%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIAMAMLSNIF-PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ L+ + +  +S +  P  +        +   ++ ++G ++ E   D   + ASL+K+
Sbjct: 1   MKKVLIALTILAISCLAYPAQADHYDISAKHAIAVELDSGKILYEKDADKTVSVASLSKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  ++  K    + +TIS    +       ++        T+   LK LIV +A
Sbjct: 61  LTAYLVYKEVQAGKLKWDSSVTISNYPYKLTTNYTISNVPLDARKYTVKELLKALIVTNA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------G 162
           N  A+A+AE +  TE KFV  M    K+ G++    +NA G+  H               
Sbjct: 121 NSPAIALAEKIGGTEAKFVDKMIAQLKDWGITGAKVVNASGLPNHILGEHIYPGSSLDDD 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +  +FP+ +        E   ++  + N+ +        G DG+  
Sbjct: 181 NQFSAADLALVTSHLLKEFPEVLKLSSQVQAEFNHQQIFSYNYMLKGMPNYRDGVDGLFV 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            ++   G + +A++++ +  +I V+L A     +       +  LL     +      + 
Sbjct: 241 SYSEKGGSSFLATSVENNMRIITVVLNADHAQDNDTAVFTATNQLLQYVLTHFKKVVVLE 300

Query: 275 YIIKDFYQQNLSNEVPNI------SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               D  +     + P         +++   +       T  + +  K       +K   
Sbjct: 301 KGKPDQLKALPVLDSPQKKIQLVPKKKLTMIKALDDKSKTTFQVSDTKNPLVAPIQKGQT 360

Query: 329 LKNKIT 334
           L     
Sbjct: 361 LAKATL 366


>gi|111115435|ref|YP_710053.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia afzelii PKo]
 gi|216263478|ref|ZP_03435473.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia afzelii ACA-1]
 gi|110890709|gb|ABH01877.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia afzelii PKo]
 gi|215980322|gb|EEC21143.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia afzelii ACA-1]
          Length = 401

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 80/321 (24%), Positives = 128/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  V+    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLMDFDTKRVLYSKNPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN  + 
Sbjct: 100 YYNAPPNSSLMFLEKGQIVNFEEILKGLSVSSGNDASIAIAEFVVGDLNSFVNLMNINAF 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
           NLGL   HF+   G     +  TA DMA  +      F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSGYSN-ENKITALDMAFFAKSYVEKFKFMLNIHSLKYFVYPKSKNLGT 218

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                    K  N N  +  +  +DG+KTG+   SG N+VA+A++G++ LIAV+LG    
Sbjct: 219 TLSSKFLNLKQRNANLLIDDYPYSDGLKTGYIKESGLNLVATALKGERRLIAVVLGVEKG 278

Query: 250 NTRNKV------SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
             R         + +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INRFGEKMRALIAKNLFEYGFNEYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYVLTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|255101277|ref|ZP_05330254.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile
           QCD-63q42]
          Length = 394

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 82/355 (23%), Positives = 157/355 (44%), Gaps = 25/355 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ + +  + +        +  ++         L+D  TG V+    PD     ASL+K
Sbjct: 5   LKKIISLAMILVFIIPNYSYADDKSVDKYSKTSILIDQETGRVLYSKEPDMKVPLASLSK 64

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +MT  +    ++ K+   T  + I K+ +    S+   K G  + L   ++ L++ S ND
Sbjct: 65  MMTFLLAIEAIENKEVKETDKVKIDKSIASVKGSSYKLKDGEEVPLIELMRGLMIVSGND 124

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV----------VQHGHYTTAR 168
            A+AIA+ +CKT++ FV  MN  +K +G+S THF+N +G+              + +TA+
Sbjct: 125 AAIAIAKHICKTKEAFVDRMNKKAKEIGMSNTHFLNPNGLPIYDLSNPKKPAKENISTAK 184

Query: 169 DMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           D+AIL   +   + + +      +      +  +  NTN  +      DG+KTG+T  +G
Sbjct: 185 DIAILGKYMFDHYEKQVTAITDMETYTNSDRSFEKSNTNALLRIIPEVDGIKTGYTGNAG 244

Query: 226 FNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           + +  S +          + +I V+LG   +N R   S +LL  G  N   +K I+    
Sbjct: 245 YCLSFSMVVNKNDKNEKKRRVIGVVLGTNHKNKRTSASLALLKYGKENFNMKKVIDKDSF 304

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           I K + +     EV   +++   T  +         + K+ E      + + ++K
Sbjct: 305 IGKKYIKGMKELEVTLKAKDELYTILKGDESIKSEVKIKNIEYPVKKGDTMGIIK 359


>gi|319404207|emb|CBI77800.1| Penicillin-binding protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 390

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/337 (22%), Positives = 130/337 (38%), Gaps = 11/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   + +L       +           +LD NT  ++ E   D  + PASL KLMTA V
Sbjct: 7   VLFSLIWILIFNEQGQTKKFQTSALQLLILDDNTDTILFEKQSDIVFFPASLAKLMTAEV 66

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  LK+     T    +S+NA          +    K+ + +++ + L  L++ + ND 
Sbjct: 67  VFYQLKKGFLNKTQKFKVSENAWRKGGAPSGTTTMFAKEKTEISIFDLLHGLVIVNGNDA 126

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AV +AE +   E  F + MN  +K LGL  +HF+NA G+ + G +TT RD+  L   I  
Sbjct: 127 AVILAEGIAGNEANFAKLMNKRAKTLGLLHSHFVNATGLPEKGQFTTLRDIITLVRHIAR 186

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           ++P Y   ++            N N        +  +G+  G++   GF+ V SA    Q
Sbjct: 187 EYPDYYALYREPNFTWNKITQRNKNSLIFQENDVKIEGLGFGYSEEVGFSTVISAYNNQQ 246

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            +   I G  ++  R K    +L         +              Y    ++    + 
Sbjct: 247 RIFLAINGLQNKQERTKEVKRILEWAMTAFDLKTVFTRDEVVGYASVYGGAQNSVPLIVK 306

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           E +     +  N+N      +              + 
Sbjct: 307 EPISFMLLKQKNFNDVNAIIQYHGPLKAPVTTGQKVG 343


>gi|257879976|ref|ZP_05659629.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,230,933]
 gi|257893087|ref|ZP_05672740.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,408]
 gi|257814204|gb|EEV42962.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,230,933]
 gi|257829466|gb|EEV56073.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,408]
          Length = 435

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 121/350 (34%), Gaps = 32/350 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++ +   +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYDQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWGDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEGTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 -DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               +     +    +  V       +     M   K   +  +D +++T
Sbjct: 320 IPSLKTIDVKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITPTLDKKQVT 369


>gi|229020609|ref|ZP_04177345.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
 gi|228740670|gb|EEL90932.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
          Length = 425

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 148/374 (39%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ L I+ + +LS  ++    S AE     +     L D +TG ++ E  PD     AS
Sbjct: 3   MKKILSILLVFLLSISSLGVTTSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              ++ L    
Sbjct: 63  MSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVRELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  I T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G+DG+KTG +  +G+    +A +GD  LI+VI+     + R   S +L+  GF N  
Sbjct: 243 AYEGSDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMDERFTESRALIEYGFNNFE 302

Query: 269 DRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES---HFI 321
            +K    K N I     +++     P     V T +     Y    +  K          
Sbjct: 303 KQKLKVDKNNKISVVKGKEDYVTVAPEKEVIVVTAKGNKAPYKISTEADKSLAEDGHLVA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + + + +
Sbjct: 363 PIKKDAKVSSIVLE 376


>gi|258512050|ref|YP_003185484.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257478776|gb|ACV59095.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 290

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 12/261 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              +        +           + D     V+ +   D P  PAS TKLMTA ++   
Sbjct: 25  FAVLAPWAQAETTRPPAVNAKAAVVYDATDRKVLYDKRGDEPMYPASTTKLMTAILLVQH 84

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                     P+ IS+ AS  P      + G+ +T + AL  LI+KSAND+A  IAE++ 
Sbjct: 85  -----LQPDDPVYISETASRQPRVRLGLRPGTELTAEQALLALIMKSANDVAYGIAETIG 139

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            +++ F + MN  ++ +G + T F+  +G+    H T+A+D+A+++ +  T +P+ +   
Sbjct: 140 GSQEGFARMMNVEARLIGCTHTQFVTPNGLHADAHTTSAKDIALITAKAIT-YPRIVRAM 198

Query: 189 QIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQ--GDQSLIAV 242
           Q     I GK   N N  + +         G KTGFT  + + +  +  +      L++V
Sbjct: 199 QTPQATIAGKTIRNGNRLLYSPPASIGEFIGGKTGFTSRAMYCLATAVRRPYDGHILVSV 258

Query: 243 ILGALDRNTRNKVSASLLSMG 263
           + GA  ++   + +  LL+  
Sbjct: 259 VFGAPRKSLMYRETVRLLTWA 279


>gi|229160519|ref|ZP_04288514.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
 gi|228622929|gb|EEK79760.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
          Length = 362

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/308 (24%), Positives = 119/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+           AS+TK+MTA +     K K       +++S 
Sbjct: 17  NVSARNAVLMEQQSGRVLYGKAEHESQKIASITKIMTALLAAESGKMK-----EMVSVSN 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAE++  + + FV  MN  +K 
Sbjct: 72  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVGGSIEGFVYLMNEKAKQ 131

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 132 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 190

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 191 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 247

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    +  +K   DK +  
Sbjct: 248 DKGFERFKQTKVLGQGALAEINEKKYANHVYTKNSFSVPLTEEEKKSVVLKVELDKSTKL 307

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 308 TDGVKVGK 315


>gi|195978796|ref|YP_002124040.1| D-alanyl-D-alanine carboxypeptidase precursor DacA.1 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195975501|gb|ACG63027.1| D-alanyl-D-alanine carboxypeptidase precursor DacA.1 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 428

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 140/366 (38%), Gaps = 32/366 (8%)

Query: 1   MRQFLVIIA-MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ L+ +  +A+    +P  +        +   ++ ++G ++ E   D   + ASL+K+
Sbjct: 17  MKKVLIALTILAISCLAYPAQADHYDISAKHAIAVELDSGKILYEKDADKTVSVASLSKV 76

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +TAY+V+  ++  K    + +TIS            ++        T+   LK LIV +A
Sbjct: 77  LTAYLVYKEVQAGKLKWDSSVTISNYPYELTTNYTISNVPLDARKYTVKELLKALIVTNA 136

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------G 162
           N  A+A+AE +  TE KFV  M    K+ G++    +NA G+  H               
Sbjct: 137 NSPAIALAEKIGGTEAKFVDKMIAQLKDWGITGAKVVNASGLPNHILGEHIYPGSSLDDD 196

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +  +FP+ +        E   ++  + N+ +        G DG+  
Sbjct: 197 NQFSAADLALVTSHLLKEFPEVLKLSSQVQAEFNHQQIFSYNYMLKGMPNYRDGVDGLFV 256

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            ++   G + +A++++ +  +I V+L A     +       +  LL     +      + 
Sbjct: 257 SYSEKGGSSFLATSVENNMRIITVVLNADHAQDNDTAVFTATNQLLQYVLTHFKKVVVLE 316

Query: 275 YIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                                    +++   +       T  + +  K       +K   
Sbjct: 317 KGKPDQLKALPVLDSPQKKVQLVPKKKLTMIKALDDKSKTTFQISDTKNPLVAPIQKGQT 376

Query: 329 LKNKIT 334
           L     
Sbjct: 377 LAKATL 382


>gi|152975589|ref|YP_001375106.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024341|gb|ABS22111.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 337

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 12/276 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M  FL ++    +   F         +     L+D ++G ++ +     P+    L+KLM
Sbjct: 8   MLIFLSLLITIAIVLYFYIYVNGPAIQSQSAILIDADSGEIVYKKNETSPFPSGDLSKLM 67

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++   +          + I  N+     ++      S +T+ +    + +   N  A
Sbjct: 68  TEYILLERIHNGTLKWEDEVIIKDNSFHIGANDIGTTVKSDITIRDLFHAVALTGNNRAA 127

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHYT---TARDMAILSWR 176
           +A+AE +   E+ F++ MN  ++ LG    T+F+N  GV          TA D + L+ +
Sbjct: 128 LALAEHISTNEENFIKLMNEKARQLGLSKDTYFINVTGVSNKQEQFSKITALDASKLARQ 187

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNI 228
           +  D+P  +    +   +   K     N     +           DG++T F+  +G++ 
Sbjct: 188 LLYDYPTILKSSSMTSYQFIFKDIHVFNTNRMLYSLDKNVKLKSVDGLQTSFSPTTGYSF 247

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
           V +A + D+ LI+V+LGA   N+    S  L + GF
Sbjct: 248 VGTAKEKDRRLISVVLGAKGENSSFIESKKLFNYGF 283


>gi|219685272|ref|ZP_03540092.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia garinii Far04]
 gi|219673368|gb|EED30387.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia garinii Far04]
          Length = 392

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/321 (23%), Positives = 123/321 (38%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 31  AKSIVLMDFDTKRILYSKNPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 90

Query: 88  EYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 91  YYNAPLNSSLMFLEKGQIVNFEEILKGLSVSSGNDASIAIAEFVVGDLNSFVNLMNINVL 150

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
           NLGL   HF+   G     +  TA DM+         F   ++   +K            
Sbjct: 151 NLGLLNMHFVEPSGYSN-ENKITALDMSFFVKSYIEKFKFMLNIHSLKYFVYPKSKNLGT 209

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                    K  N N  +  +  +DG+KTG+   SG N+VA+A +  + LIAV+LG    
Sbjct: 210 TLSSKFLNLKQKNANLLISDYPYSDGLKTGYIKESGLNLVATAQKDGRRLIAVVLGVEKG 269

Query: 250 NTRNKV------SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
             R         +  L   GF   +    I  + +  Y   +        E       + 
Sbjct: 270 INRFGEKMRALIAKDLFEYGFNEYSKFSLIVKLKEKVYNGTVDTVALFSKEPFYYVLTKD 329

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                ++    DK    +  +
Sbjct: 330 EFDKLKISYTVDKLVAPLSGD 350


>gi|323691411|ref|ZP_08105685.1| hypothetical protein HMPREF9475_00547 [Clostridium symbiosum
           WAL-14673]
 gi|323504554|gb|EGB20342.1| hypothetical protein HMPREF9475_00547 [Clostridium symbiosum
           WAL-14673]
          Length = 513

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/353 (21%), Positives = 133/353 (37%), Gaps = 39/353 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ + ++   ++    P +              +     ++D ++  VI          
Sbjct: 33  MKKLMSLLLSIIMILAGPAMTSYAKPDWPADTGIQSEAGIVMDMDSKTVIFGQNIHVQKA 92

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNAL 108
           PAS+TKL+TA VV          L   +T S +A         + +  + G  MT+ + L
Sbjct: 93  PASITKLLTALVVIENA-----NLDDMVTFSDDAIHNVEEGAGNKNALEPGDKMTVKDCL 147

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             +++ S+N  A A+AE +  +   FV  MN   K LG   +HF N  G+      TT  
Sbjct: 148 YHMLLTSSNQSANALAEHVAGSRDAFVAMMNEKVKELGCENSHFANPSGLNDDTQLTTVY 207

Query: 169 DMAILSWRIKTD-----------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           DMA++      +           +          G+ IK +    T      +  A   K
Sbjct: 208 DMALIGTAAYENPVLLEIGSAKSYRLPPTANNPDGVTIKMEHKMLTEGDPNYYQAAIAGK 267

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN--- 274
           TGFT  +G  +V  A + D+ LIAV + +    T  + + +LL  GF    + K      
Sbjct: 268 TGFTSIAGQTLVTYASKDDRKLIAVTMKS-TEFTHYQDTKALLDFGFDRFKNIKIAENET 326

Query: 275 ---YIIKDFYQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHF 320
                 +     + S E  ++S +    +   +    +   +    K  E+H 
Sbjct: 327 SYTTGDQPVELGDSSYEPSDLSIDPKAVITVPKDAQFSDTDKNVVTKLPENHP 379


>gi|294649783|ref|ZP_06727186.1| D-ala-D-ala-carboxypeptidase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824334|gb|EFF83134.1| D-ala-D-ala-carboxypeptidase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 438

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 11/325 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
             ET +   ++++D  +G +IAE+       PASLTK+M AYV    ++  K      IT
Sbjct: 27  SPETVEAQAWSIVDAQSGQIIAEHNSHVQRAPASLTKMMVAYVALKEIEAGKLRKEDVIT 86

Query: 82  IS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            +   N   +  S    K+G  +++D  L  LIV SAND A+ +AE +  +  +F+  MN
Sbjct: 87  ATSVVNTVMWDESQMYLKEGEQISVDQLLAGLIVMSANDAALTLAERISGSVPQFIIRMN 146

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG+  THF N  G+    HY+TA D+ +L+  I T  P+Y++Y ++       + 
Sbjct: 147 QEAQALGMKDTHFSNPAGITMPDHYSTAADLGLLAQAIVTKTPEYLYYSKMPSFSYNQRF 206

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTR 252
           +  TN A+     ADG+KTGFT A+G+N+  +A +         + LI ++LG  +   R
Sbjct: 207 HRATNLALKMDSTADGLKTGFTKAAGYNLALTAERPTLNPHIDKRRLIVIVLGTPNAIKR 266

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN-YNTQMK 311
            +V+  L+++ +    D + I           + + +     E         + Y+    
Sbjct: 267 AEVANKLMNLAYAYTRDEEVIPKHQLIAELPVIRSTLKIFKVETQQPTIVTTSLYDQATP 326

Query: 312 EAKDKESHFID-FEKITLLKNKITK 335
              ++        + +     KI +
Sbjct: 327 IDLNQFDPLTQRLQVVDENGVKIIE 351


>gi|167766432|ref|ZP_02438485.1| hypothetical protein CLOSS21_00937 [Clostridium sp. SS2/1]
 gi|317498290|ref|ZP_07956589.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167711841|gb|EDS22420.1| hypothetical protein CLOSS21_00937 [Clostridium sp. SS2/1]
 gi|291560872|emb|CBL39672.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SSC/2]
 gi|316894499|gb|EFV16682.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 374

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 79/343 (23%), Positives = 134/343 (39%), Gaps = 30/343 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           ++      +           ++D  +G ++     D    PAS+TK++T  V     K  
Sbjct: 35  VATAEKTTAKQPKIYGRSGIVIDAKSGKILYAKKVDDRHYPASITKILTTLVAIENNK-- 92

Query: 73  KAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              L   +T S  A         +   K G  + L + L  ++++SAN+     AE    
Sbjct: 93  --DLYDEVTFSSYAVNSIEPGSTHIGIKAGEKIPLIDVLNAIMLESANEACNGAAEHTAG 150

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---- 185
           T KKFV+ MN   K LG + +HF+  +G+    HY TARDMA +S     +         
Sbjct: 151 TTKKFVELMNKKVKELGCTGSHFVTTNGLHDDDHYVTARDMAKISKAALENETFRYVACK 210

Query: 186 --HYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             +Y      +  GK+  N +      +  + G +G KTG+T  +G  +V  A +GDQ L
Sbjct: 211 PNYYIAPTNKDKHGKELWNHHKMVKRTMFNYDGVEGGKTGYTTKAGGTLVTFAKRGDQEL 270

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN----------YIIKDFYQQNLSNEV 289
           I V L A       + +  +L+ GF N                  Y       +    ++
Sbjct: 271 IVVDLCAHGYEL-YEDTIKMLNYGFNNYKTIAPFKTMNTVLKDDTYGFLKTGNELSPYKI 329

Query: 290 P--NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           P  ++++     +K         K   +K     D ++I  +K
Sbjct: 330 PLKHLNDVTVMLEKNQSASKLTYKCKDNKYIISYDGKQIGSVK 372


>gi|228964541|ref|ZP_04125651.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228795141|gb|EEM42637.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 362

 Score =  145 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 78/308 (25%), Positives = 118/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 17  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 72  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNEKAKK 131

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 132 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGNES-FKKIFGTKTYKSDSWDYPWK 190

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 191 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 247

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K   DK    
Sbjct: 248 DKGFERFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEERKNVLLKVELDKSITL 307

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 308 EDGVKVGK 315


>gi|322374184|ref|ZP_08048717.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C150]
 gi|321276889|gb|EFX53961.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C150]
          Length = 417

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/368 (20%), Positives = 143/368 (38%), Gaps = 39/368 (10%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   ++++A+ ++  + P L+  +T        +   +++ TG V+ E     P   A
Sbjct: 3   MKKLQHIIMVALILIGLVTPALAQEQTDDFNVAAKHAIAIESTTGKVLYEKDATTPDGVA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 63  SMTKILTAYMVYKAIDQGKITWDTEVNISDYPFNLTVDSEVSNVPLDSRKYTVKQLLDAT 122

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  TE  FV  M    K  G++     NA G+             
Sbjct: 123 LISSANSAAIALAEKISGTESAFVDTMKAQLKKWGITDAKLYNASGLNNKYLGDNRYPGS 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +   ++     K    N+          G
Sbjct: 183 KPDDENTMSALDVAIIADHLIKDYPQVLDITKQGEVDFEGDNKLTTHNYMLEGQDNYREG 242

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI V++    G  D   R   +  LL     +  
Sbjct: 243 VDGLKTGTTELAGASFVAHSNENGMSLITVVMNADNGGEDEAARFTATNDLLDYVVQHWK 302

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH-----FIDF 323
             K          ++N       +S+ V    +  +    ++    D  +          
Sbjct: 303 INKLNTKGQ--IVKKNDIKVADGVSKTVSAKLESDLTVVQKINSQNDTVNIKAKTVTAPI 360

Query: 324 EKITLLKN 331
           +K   +  
Sbjct: 361 KKGDTIGT 368


>gi|229010872|ref|ZP_04168069.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
 gi|229132375|ref|ZP_04261229.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228651081|gb|EEL07062.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228750546|gb|EEM00375.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
          Length = 362

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 80/324 (24%), Positives = 129/324 (39%), Gaps = 16/324 (4%)

Query: 12  MLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           M +++ P  + A+           L++  +G V+       P   AS+TK+MTA +    
Sbjct: 1   MYASVMPIPAYAKMNGGVSARNAVLMEQQSGRVLYGKLEHEPQKIASITKIMTALLAAES 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K K+      +++S  A     S    K G  + L++ +  L+++S ND A  IAE++ 
Sbjct: 61  GKMKEL-----VSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVG 115

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+     +   +   
Sbjct: 116 GSIEGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKI 174

Query: 188 FQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           F  K  +     YP  N        +  A G KTGFT  +G  +V +A +    LI V L
Sbjct: 175 FGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTL 234

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
            A           +L   GF      K +         +                  E  
Sbjct: 235 SASSD---WDDHMNLFDKGFERYKQAKVLGQGALAEINEKKYANHVYTKNSFSVPLTEEE 291

Query: 305 NYNTQMKEAKDKESHFIDFEKITL 328
             +  +K   DK +   D  KI  
Sbjct: 292 RKSVLLKVELDKSAKLTDGVKIGK 315


>gi|302385106|ref|YP_003820928.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
 gi|302195734|gb|ADL03305.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
          Length = 479

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/356 (19%), Positives = 127/356 (35%), Gaps = 41/356 (11%)

Query: 2   RQFLVIIAMAMLSNIF-------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  V+I+  ++S +F       P        +     ++D ++G V+       P+ PA
Sbjct: 3   RRIKVLISCILVSQLFLMTVYAKPDWPSDTGIQAEAGIVIDGDSGAVLFGQNIHAPYPPA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALKL 110
           S+TK++TA +V          L   +T SK++         +      G  +++++ L  
Sbjct: 63  SITKILTALIVLENAD-----LNDMVTFSKDSVYNVEEGSGNKLNVDTGDKLSVEDCLYS 117

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           LI+ S N  A A+AE +  + + FV  MN   K LG   +HF N  G+     Y TA DM
Sbjct: 118 LILHSCNQAANALAEHVAGSREAFVSMMNEKIKELGCVESHFDNPSGLNGDTQYVTAYDM 177

Query: 171 AILSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNW--------AVGTFLGADGM 216
           A+++    ++                     +G    N +         +      A   
Sbjct: 178 ALIAKAAYSNKKLVEISSAISRNIPPTANNPEGLTIYNEHRLVKTKDTKSEFYCPSAVAG 237

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY- 275
           KTG+   +G  +V    Q  + LI+VIL             +LL  GF    +       
Sbjct: 238 KTGYLIKAGNTLVTYGEQDGKRLISVILKG-SPKQYFIDGKALLEFGFSRFENFPVTGPE 296

Query: 276 -----IIKDFYQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHFID 322
                  +       S +  ++  E    +   +   ++   +       E     
Sbjct: 297 TGYLSGEEPVEINGTSYKPSDLELEPDQVITLPKGAELSQADKTLVTDLPEGSPKG 352


>gi|229189650|ref|ZP_04316665.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
 gi|228593914|gb|EEK51718.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
          Length = 363

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/308 (25%), Positives = 118/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 18  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 72

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 73  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNQKAKE 132

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 133 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 191

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 192 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 248

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K    K +  
Sbjct: 249 DKGFERFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEEKKNVVLKVELHKSTKL 308

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 309 TDGVKVGK 316


>gi|220928795|ref|YP_002505704.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
 gi|219999123|gb|ACL75724.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
          Length = 440

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 145/366 (39%), Gaps = 36/366 (9%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L  +II++ +L  + P  S         Y L+D  TG V+ E+ PD  W PAS TK
Sbjct: 1   MKKVLATLIISLTILLQVSPAFSANLDIDAASYILMDAKTGSVLYEHKPDLKWRPASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           + TA V        + M  +   ++         N     G  M+L++ L  L++ SAN+
Sbjct: 61  IATALVALKEGNMDQVMTASNEAVTD--IGVGGMNIGIMPGEQMSLNDLLHALLIVSANE 118

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILS 174
            A  I+E+L   + KF++ MN  S  +G   T F N  G+        H+++ARD+A+++
Sbjct: 119 TANIISENLYNDKSKFLEEMNKVSAEVGAKNTTFTNPSGIDEYEKDANHFSSARDLALIA 178

Query: 175 WRIKT---------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-----------AD 214
                              M     K          N         G             
Sbjct: 179 KECLKYPVFREIVEQKQLNMLPPTNKHKTWNVLNTTNKLLGQSFKYGPETGDDRNQFTIT 238

Query: 215 GMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTR--NKVSASLLSMGFYNKTDRK 271
           G+KTG T  +G N ++SA  +    LI+V+LG  ++  R     + +LL+ G+ N + + 
Sbjct: 239 GLKTGSTLRAGANFISSAVNKDGLELISVVLGVNNKPNRSVFDFTKTLLTAGYENYSRQM 298

Query: 272 KINYIIKDFYQ-----QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
            I+   K          N        + E+     +  N     K+    +      +K 
Sbjct: 299 IIDRSTKIQEITVKDAANGDKVALITNGEIEALLPKDKNEWRLNKKINITQDIKAPVKKG 358

Query: 327 TLLKNK 332
           T+L N 
Sbjct: 359 TVLGNI 364


>gi|229199512|ref|ZP_04326173.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
 gi|228583917|gb|EEK42074.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
          Length = 425

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 142/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++   I+ + +LS  ++    S AE     +     L D +TG ++ E  PD     AS
Sbjct: 3   MKKIFSILLVFLLSISSLGVTTSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + IS  A E   +N              ++ L    
Sbjct: 63  MSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVRELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  + T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + GADG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 243 AYEGADGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFNNFE 302

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            Q           +E+    K+      ++    DK          
Sbjct: 303 KQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKIGTEVDKSLAEDGHLIA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + +   +
Sbjct: 363 PIKKDAKVGSITLE 376


>gi|255656482|ref|ZP_05401891.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           QCD-23m63]
 gi|296450072|ref|ZP_06891834.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP08]
 gi|296878453|ref|ZP_06902459.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP07]
 gi|296261080|gb|EFH07913.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP08]
 gi|296430537|gb|EFH16378.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           difficile NAP07]
          Length = 429

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 82/353 (23%), Positives = 139/353 (39%), Gaps = 38/353 (10%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               + S+   F     +    +  L+D  +G ++     +    PAS TK+ TA +V  
Sbjct: 15  FTSFLGSSNISFADNEPSIVAKHAVLMDYESGKILYNKDGNSKLYPASTTKVWTACLVLK 74

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K     L   I I KN  +   S+   K+G + T+   L  L+V SAND A  +A  +
Sbjct: 75  EVK----DLNQVIEI-KNLPQIDGSSMYLKEGESFTVKQLLNALLVHSANDAAFVLARYV 129

Query: 128 -CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------ 180
                +KF+  MN+ +K +G + THF N HG+    HYTTA DMA+++     +      
Sbjct: 130 GGGDVQKFIDLMNSEAKKIGATNTHFNNPHGLPDPNHYTTAHDMALIAREAMNNDTFRQI 189

Query: 181 --------------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                           +       K L    K           +   DG+KTG+T A+G 
Sbjct: 190 VKTKSLKFEATKAYPYERYFVNTNKFLTSHDKITYKGQPINIKYDIVDGIKTGYTDAAGK 249

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT------DRKKINYIIKDF 280
            +++SA++  + +I  +  +         S  L+  GF N          K  +     F
Sbjct: 250 CLLSSAVKDGRRVIVAVFNS-TNADLYLDSRILIDYGFDNFKCATIVDKEKYTDTKKVLF 308

Query: 281 YQQNLSNEVPNISEEVCTTQKEII-NYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +Q+     P  S  +   + E   NY+T+ +  K      +  +K   +   
Sbjct: 309 TKQHELVYEPKNSYRIFLEKNESQGNYDTKTELNK----IDLPIKKGAKVGTL 357


>gi|323483146|ref|ZP_08088538.1| D-alanyl-D-alanine carboxypeptidase [Clostridium symbiosum
           WAL-14163]
 gi|323403566|gb|EGA95872.1| D-alanyl-D-alanine carboxypeptidase [Clostridium symbiosum
           WAL-14163]
          Length = 512

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/353 (21%), Positives = 133/353 (37%), Gaps = 39/353 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ + ++   ++    P +              +     ++D ++  VI          
Sbjct: 33  MKKLMSLLLSIIMILAGPAMTSYAKPDWPADTGIQSEAGIVMDMDSKTVIFGQNIHVQKA 92

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNAL 108
           PAS+TKL+TA VV          L   +T S +A         + +  + G  MT+ + L
Sbjct: 93  PASITKLLTALVVIENA-----NLDDMVTFSDDAIHNVEEGAGNKNALEPGDKMTVKDCL 147

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             +++ S+N  A A+AE +  +   FV  MN   K LG   +HF N  G+      TT  
Sbjct: 148 YHMLLTSSNQSANALAEHVAGSRDAFVAMMNEKVKELGCENSHFANPSGLNDDTQLTTVY 207

Query: 169 DMAILSWRIKTD-----------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           DMA++      +           +          G+ IK +    T      +  A   K
Sbjct: 208 DMALIGTAAYENPVLLEIGSAKSYRLPPTANNPDGVTIKMEHKMLTEGDPNYYQAAIAGK 267

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN--- 274
           TGFT  +G  +V  A + D+ LIAV + +    T  + + +LL  GF    + K      
Sbjct: 268 TGFTSIAGQTLVTYASKDDRKLIAVTMKS-TEFTHYQDTKALLDFGFDRFKNIKIAENET 326

Query: 275 ---YIIKDFYQQNLSNEVPNISEE----VCTTQKEIINYNTQMKEAKDKESHF 320
                 +     + S E  ++S +    +   +    +   +    K  E+H 
Sbjct: 327 SYTTGDQPVELGDSSYEPSDLSIDPKAVITVPKDAQFSDTDKNVVTKLPENHP 379


>gi|228984648|ref|ZP_04144821.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775042|gb|EEM23435.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 362

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 76/308 (24%), Positives = 120/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 17  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAE++  + + FV  MN  +K 
Sbjct: 72  EAVRVEGSAIYLKPGQKVKLEDIVYGLMLRSGNDAAQVIAENVGGSIEGFVYLMNEKAKQ 131

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 132 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTRYAMGN-ETFKKIFGTKTYKSDSWDYPWK 190

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A + +  LI V L A           +L 
Sbjct: 191 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDELDLIVVTLSASSD---WDDHMNLF 247

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF        +         +                  E    N  +K   DK +  
Sbjct: 248 DKGFERFKQTNVVGQGALAEITEKKYANHVYTKNSFAVPLTEQERKNVVLKVELDKSAKL 307

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 308 KDGVKVGK 315


>gi|163939383|ref|YP_001644267.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163861580|gb|ABY42639.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 374

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/324 (24%), Positives = 129/324 (39%), Gaps = 16/324 (4%)

Query: 12  MLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           M +++ P  + A+           L++  +G V+       P   AS+TK+MTA +    
Sbjct: 13  MYASVMPIPAYAKMNGGVSARNAVLMEQQSGRVLYGKLEHEPQKIASITKIMTALLAAES 72

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K K+      +++S  A     S    K G  + L++ +  L+++S ND A  IAE++ 
Sbjct: 73  GKMKEL-----VSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVG 127

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+     +   +   
Sbjct: 128 GSIEGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKI 186

Query: 188 FQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           F  K  +     YP  N        +  A G KTGFT  +G  +V +A +    LI V L
Sbjct: 187 FGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTL 246

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
            A           +L   GF      K +         +                  E  
Sbjct: 247 SASSD---WDDHMNLFDKGFERYKQAKVLGQGALAEINEKKYANHVYTKNSFSVPLTEEE 303

Query: 305 NYNTQMKEAKDKESHFIDFEKITL 328
             +  +K   DK +   D  KI  
Sbjct: 304 RKSVLLKVELDKSAKLTDGVKIGK 327


>gi|227892363|ref|ZP_04010168.1| D-alanyl-D-alanine serine family carboxypeptidase [Lactobacillus
           salivarius ATCC 11741]
 gi|227865770|gb|EEJ73191.1| D-alanyl-D-alanine serine family carboxypeptidase [Lactobacillus
           salivarius ATCC 11741]
          Length = 417

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 145/369 (39%), Gaps = 39/369 (10%)

Query: 1   MRQFLVIIAMAMLSNI--------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +++  +    +++                     +      +D  TG +I        + 
Sbjct: 5   LKKLGISFLTSLMVVTGIGQGFINADQTLPQLDLEAKSAIAVDAKTGQIIYAKDDKQTYP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNAL 108
            AS++KL+TAY++   + + +    T +T +      ++    +N   ++G + T+    
Sbjct: 65  VASMSKLLTAYILLQAIHKGEITWETRVTPTATEVDISNNTELTNVPLQEGHSYTIRQLY 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------- 159
           + ++V SAN   + I  ++  T+ KF+  M  T+K+LG++     +A+G+          
Sbjct: 125 QAMLVGSANAATMLIGNAISGTQTKFIDKMRETAKSLGITDAKIYSANGLTAKYLGDEIY 184

Query: 160 -----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----KYPNTNWAVGTF 210
                   +  + RDMAI+S ++  ++P+ +   ++  ++           NTN  +   
Sbjct: 185 PNTDENAENEFSVRDMAIISQKLIKEYPEILETTKLTMIDFNDNGEITTVNNTNELLQDD 244

Query: 211 LG--ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK- 267
                DG+KTG + A+G+   ++  +    +I VI GA D + R   + +LL+  + N  
Sbjct: 245 SNLEVDGLKTGTSDAAGYCFASTTNKDGHRIITVIAGAKDNDARFDQTKNLLNYIYNNYD 304

Query: 268 -----TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
                T++     I   + +Q+  + +      +   +             K        
Sbjct: 305 YLAISTNQALRQDIKVKYGKQSSISTIIGNDLSLWVPKNTRAKALQIKLTPKS-SKIEAP 363

Query: 323 FEKITLLKN 331
            ++   + +
Sbjct: 364 IKQGETVGD 372


>gi|205373761|ref|ZP_03226563.1| penicilin binding protein (putative D-alanyl-D-alanine
           carboxypeptidase) [Bacillus coahuilensis m4-4]
          Length = 322

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 8/285 (2%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT  ++   +++ +      +  S+ A+    S    + G  MT++  LK + + SAND 
Sbjct: 1   MTMILIMEAIEKGQINWEDKVRTSEYAASMGGSQIFLEPGEEMTVEEMLKGIAIGSANDA 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW---- 175
           +VA+AE +  +E+ FV+ MNN  + L L  T F N  G+    H+++A DMA+++     
Sbjct: 61  SVAMAEFIAGSEEAFVEMMNNKVEELKLKDTVFQNPTGLPADNHFSSAYDMAMMAKELLK 120

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             K       +   ++    +     NTN  V  + G DG+KTG+T  + + + A+A  G
Sbjct: 121 YEKITQFTGTYEDYLRENTDEKFWLVNTNKLVRFYDGVDGLKTGYTSEAKYCLTATAKVG 180

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPN 291
           +  ++AV+ G      RN   + +L   F             +       +   +  +  
Sbjct: 181 NMRVVAVVFGEPTPKERNAEVSKMLDYAFSQFMTHPMYEKGKEISEAKVSKGKENTVIGM 240

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +E +    K+        ++    +      +K   +     +K
Sbjct: 241 TNESISLLTKKGEKLEGIEEKIVMNKELKAPIKKGDDIGTITIQK 285


>gi|257884114|ref|ZP_05663767.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,501]
 gi|257819952|gb|EEV47100.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecium
           1,231,501]
          Length = 435

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/355 (18%), Positives = 120/355 (33%), Gaps = 32/355 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            + L  +                 +D  +G ++     +     AS+TK++  Y+V   +
Sbjct: 20  ASFLPAVAVQAEDTFKVNAKAAFAVDAQSGKILYNQDGEKTMGIASITKIIGLYIVLDQV 79

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           KE K      ++IS  A     +               +K L   +    A A   +L +
Sbjct: 80  KEGKLSWDDKVSISDYAENLSITPDLSNVPLHKENTYTVKELFDSAIIQSANASMVALAE 139

Query: 130 T----EKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMA 171
                E KF + M    K+ G+     +NA G+                  +  +A+D+A
Sbjct: 140 KISGSEAKFTERMKEQLKDWGIKDATIVNASGLNNSYLGENRPEDTGENDENQMSAQDVA 199

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTC 222
           I++  +  DFP+ +                     N NW +  F     G DG+KTG T 
Sbjct: 200 IVARHLILDFPEILDVSSTTTQMFGENTQSPVEMVNWNWMLPGFVNYKEGVDGLKTGTTE 259

Query: 223 ASGFNIVASAIQGDQSLIAVILGALD----RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            +G   V +  + DQ +I V+L A       + R   +  L+   + N ++++       
Sbjct: 260 LAGACFVGTITKNDQRIITVVLNADGHAENPSARFNETDRLMDYCYDNWSEKELGKANAS 319

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
               + +          V    K  +    +      K +     +K  +  N+I
Sbjct: 320 IPSLKTID-VKDGKESTVPVVLKSPVKVWVRNDMDTGKLTITSTLDKKQVTDNEI 373


>gi|290581230|ref|YP_003485622.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus mutans
           NN2025]
 gi|254998129|dbj|BAH88730.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus mutans
           NN2025]
          Length = 413

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 144/368 (39%), Gaps = 33/368 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ + ++ + +    F   +         +   ++ NTG ++ E   D     AS+TK+
Sbjct: 1   MKKIVCLLFILISLIGFGVKAEENFDVSAKHAIAVEANTGKILYEKDADTTAGIASITKM 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  +K      ++ + IS       +   +++        T+   ++  ++ SA
Sbjct: 61  LTVYMVYKEIKSGDLTWSSKVKISDYPYSLTKDYSASNVPMDAREYTVKELVEASMIASA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HG 162
           N  A+A+AE +  TE KFV  M    +  G++    +NA G+                  
Sbjct: 121 NSAAIALAEKVGGTEPKFVDMMKKQLQEWGITDAKLVNASGLNNKTLGDHIYPDSSSEDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +ARD+AI++  +  +FPQ +   +    +  G K    N+ +        G DG+KT
Sbjct: 181 NMMSARDVAIVAHHLIKEFPQVLKITEKTNSDFSGNKMETYNYMLPNMPYAREGVDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILG-----ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           G T  +G   VA++ +    LI+V+L      + D   R + + +LL+           I
Sbjct: 241 GTTELAGACFVATSKENGMRLISVVLNADKSDSDDDAARFQATNNLLNYVNNTYEPITLI 300

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           +                 +       +     Q ++ +    +  A  K  +    +K  
Sbjct: 301 HKGQTYQGSKVKVIDGKRTTVPAVAKKNFTVIQNKLSHKKNTVSIASKKNGYTAVIKKGQ 360

Query: 328 LLKNKITK 335
           L+     K
Sbjct: 361 LVAKATFK 368


>gi|296877427|ref|ZP_06901464.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 15912]
 gi|296431588|gb|EFH17398.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 15912]
          Length = 413

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 133/364 (36%), Gaps = 32/364 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++F +  +   +L    P     +      +     ++ +TG ++ E   D       L
Sbjct: 1   MKKFFLSFLTFILLLCSLPPQRIFANEPDLPVQSAIAVEADTGKILYEKDSDKKREVGGL 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLIV 113
           + L+T Y++F  + +KK  L  PI +S+ A   ++   + +   + +  T+D  L  L+V
Sbjct: 61  STLLTTYLIFEAIHDKKLSLKDPIKLSEEALALNDIKGAGTLPIEANQYTVDQLLIALLV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-----------G 162
            +++  A A+AE +  +EK FV+ M       G+ + H +NA G+               
Sbjct: 121 GNSSTAAFALAEKVGGSEKSFVEKMKQKLAEWGIQSPHLINATGLNTQTISGDPDGKEDE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+A+++  +  DFP+   Y           +  N N  +        G DG++ 
Sbjct: 181 NQLSAYDIAVIAKHLLQDFPEVTKYTSKPTALFSNTQIENPNLMLEGMPNYRSGVDGLRV 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKIN 274
             +   G    AS  Q    +I V+LG      D   R   ++SL++           + 
Sbjct: 241 SNSTKGGITFAASTTQNGIHMITVVLGVEAVDGDPYARFVATSSLMNYVVRTFVSSIVVK 300

Query: 275 ------YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                             +      ++     K+      +++    +       +    
Sbjct: 301 RGDTYGKSKVAITDGKFESVSAVAKKDFYVVVKQGNQTEPKIQFKSSQNQFKAPVKSGDD 360

Query: 329 LKNK 332
           +   
Sbjct: 361 VGIL 364


>gi|253580937|ref|ZP_04858199.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847779|gb|EES75747.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 411

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 20/265 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                 +     L+D  T  ++          PAS+TK+MTA +   +       +   I
Sbjct: 60  PTGPNIEGQSAVLMDAVTDTILYSKNAKDKLYPASITKIMTALLACEY-----LNMDDTI 114

Query: 81  TISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           T+S+ A+       S+   + G   T++ AL  L+++SAN++A+A+AE    + KKFV+ 
Sbjct: 115 TMSQEAAYGIEAGSSSIYAETGEVFTVEQALMALMLESANEMALALAEKTSGSVKKFVEL 174

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----------PQYMHY 187
           MN  +  LG   THF N +G+    HYTTA DM  ++     +            +    
Sbjct: 175 MNQRAAQLGCKNTHFNNPNGLPDETHYTTAGDMMKIAKAAWYNPRFRKFVTTQVYEIPPT 234

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +          +         + G  G KTG+T A+G  +V  A +G+  LIAV+L   
Sbjct: 235 NKQSETRYLLNHHKMMPGQSYAYDGVLGGKTGYTDAAGSTLVTYAKRGNSILIAVVLN-- 292

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKK 272
             N     + SLL  GF N      
Sbjct: 293 STNGAFPDTTSLLDYGFDNFEKVDL 317


>gi|298245363|ref|ZP_06969169.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297552844|gb|EFH86709.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 633

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 74/296 (25%), Positives = 102/296 (34%), Gaps = 21/296 (7%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    +LD +TG  +    P       S TKLMTAY+               ITI+
Sbjct: 284 PPVYANAAYVLDADTGKTLYAQNPLMHLPMLSTTKLMTAYLA-----AHMGKPDQRITIT 338

Query: 84  K-------NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                   N      S    KKG T TL   L  L++ S ND A+ IA++L      FV 
Sbjct: 339 DAIDRDLQNDLSADSSLMGVKKGETYTLKELLYGLMLVSGNDAAIVIADALSGNVPAFVA 398

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI-----KTDFPQYMHYFQIK 191
            MN       L  TH+MN HG++   HY++A D+A +           +     HY    
Sbjct: 399 KMNQQLGTWNLHNTHYMNPHGLIVPNHYSSAHDLAYIGRYSLSDPLIHEVSATQHYLIPG 458

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
             +       N N  +  + G DG K G+     FN V S ++    LI V L   D   
Sbjct: 459 NGDHAAHDMYNGNQFLWWYPGVDGGKPGWDGEKNFNQVISCVRNQHHLIGVTLHTSD--- 515

Query: 252 RNKVSASLLSMGFYNKTDRKK-INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
                  L++ GF         I  +          N      +E          Y
Sbjct: 516 WWTDMRDLMNWGFNTYDWISPAIEDLKHPIPYDTDWNYFTKDKKENTIPMANGGRY 571


>gi|229058203|ref|ZP_04196591.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|228720067|gb|EEL71651.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
          Length = 362

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/324 (24%), Positives = 128/324 (39%), Gaps = 16/324 (4%)

Query: 12  MLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           M +++ P  + A+           L++  +G V+       P   AS+TK+MTA +    
Sbjct: 1   MYASVIPIPAYAKMNGGVSARNAVLMEQQSGRVLYGKLEHEPQKIASITKIMTALLAAES 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K K+      +++S  A     S    K G  + L++ +  L+++S ND A  IAE++ 
Sbjct: 61  GKMKEL-----VSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAENVG 115

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+     +   +   
Sbjct: 116 GSIEGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKI 174

Query: 188 FQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           F  K  +     YP  N        +  A G KTGFT  +G  +V +A +    LI V L
Sbjct: 175 FGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTL 234

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
            A           +L   GF      K +         +                  E  
Sbjct: 235 SASSD---WDDHMNLFDKGFERYKQAKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEE 291

Query: 305 NYNTQMKEAKDKESHFIDFEKITL 328
             +  +K   DK     D  KI  
Sbjct: 292 RKSVLLKVELDKSEKLTDGVKIGK 315


>gi|126700114|ref|YP_001089011.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile 630]
 gi|255101659|ref|ZP_05330636.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           QCD-63q42]
 gi|255307527|ref|ZP_05351698.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile ATCC
           43255]
 gi|115251551|emb|CAJ69384.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile]
          Length = 429

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/353 (22%), Positives = 137/353 (38%), Gaps = 38/353 (10%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               + S+   F          +  L+D  +G ++     +    PAS TK+ TA +V  
Sbjct: 15  FTSFLGSSNISFADNEPAIVAKHAVLMDYESGKILYNKDGNSKLYPASTTKVWTACLVLK 74

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K     L   I I K+  +   S+   K G + T+   L  L+V SAND A  +A  +
Sbjct: 75  EVK----DLNQVIEI-KDLPQIDGSSMYLKNGESFTVKQLLDALLVHSANDAAFVLARYV 129

Query: 128 -CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------ 180
                +KF+  MN+ +K +G + THF N HG+    HYTTA DMA+++     +      
Sbjct: 130 GGGNVQKFIDLMNSEAKKIGATNTHFNNPHGLPDPNHYTTAHDMALIAREAMNNDTFRQI 189

Query: 181 --------------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                           +       K L    K           +   DG+KTG+T A+G 
Sbjct: 190 VKTKSLKFEATKAYPYERYFVNTNKFLTSHDKITYKGQPINIKYDIVDGIKTGYTDAAGK 249

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT------DRKKINYIIKDF 280
            +++SA++  + +I  +  +         S  L+  GF N          K  +     F
Sbjct: 250 CLLSSAVKDGRRVIVAVFNS-TNADLYLDSRILIDYGFDNFKCATIVDKEKYTDTKKVLF 308

Query: 281 YQQNLSNEVPNISEEVCTTQKEII-NYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +Q+     P  S  +   + E   NY+T+ +  K      +  +K   +   
Sbjct: 309 TKQHELIYEPKNSYRIFLEKDESQGNYDTKTELNK----IDLPIKKGAKVGTL 357


>gi|319407217|emb|CBI80856.1| Penicillin-binding protein [Bartonella sp. 1-1C]
          Length = 390

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 73/337 (21%), Positives = 130/337 (38%), Gaps = 11/337 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   + +L       +           +LD NT  ++ E   D  + PASL KLMTA V
Sbjct: 7   VLFSLIWILIFNEQGQTKKFQTSALQLLILDDNTDTILFEKQSDVVFFPASLAKLMTAEV 66

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  LK+     T    +S+NA          +    K+ + +++ + L  L++ + ND 
Sbjct: 67  VFYQLKKGLLNKTQKFKVSENAWRKGGAPSGATTMFAKEKTEISVFDLLHGLVIVNGNDA 126

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+ +AE +   +  F + MN  +K LGL  +HF+NA G+ + G +TT RD+  L   I  
Sbjct: 127 AITLAEGIAGNDANFAKLMNKRAKTLGLLNSHFVNATGLPEKGQFTTLRDIITLVRHIAR 186

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNW--AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           ++P Y   ++            N N        +  +G+  G++   GF+ V SA    Q
Sbjct: 187 EYPDYYALYREPNFTWNKITQRNKNSLIFQENDVKIEGLGFGYSEEVGFSTVISAYNNQQ 246

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNIS 293
            +   I G  ++  R K    +L         +              Y    ++    + 
Sbjct: 247 RIFLAINGLQNKQERTKEVKRILEWAMTAFDLKTVFTRDETVGYASVYGGAKNSVPLIVK 306

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           E +     +  N+N      +              + 
Sbjct: 307 EPINFMLLKQKNFNDVNAIIQYHGPLKAPVTLGQKVG 343


>gi|323466012|gb|ADX69699.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus helveticus H10]
          Length = 457

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 139/373 (37%), Gaps = 46/373 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
            + +I++      F     A+            +     +D+N+G V+     D     A
Sbjct: 40  LVALISLVSCGATFSAPVKADVANYQTDQVKLNVKSAIAIDSNSGQVLYAKNADKTLPIA 99

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           S+TKLMT Y+  + +K +K      +     I K A+    SN   K G + T+    + 
Sbjct: 100 SMTKLMTVYLTLNAIKNQKLAWDQKVKPTASIVKVANNAEYSNVPLKMGHSYTIKQLYQA 159

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-------- 162
            +++SAN  A+ + +++  ++K F+  M +  K  G+       A G+            
Sbjct: 160 TLIESANGAAMLLGQTIAGSQKAFIDQMRSQVKKWGIKDAKIYTACGLPNGNVGKDAYPG 219

Query: 163 ------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF------ 210
                 +  +A+DMAI+   +  DFP+ +   ++  L+ K + +                
Sbjct: 220 VNKNAENSMSAKDMAIVGQNLIQDFPEVLDTTKLAHLDFKDQGHTTKMANFNWMLKGLSQ 279

Query: 211 ----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSM 262
                  DG+KTG T A+G   + +       LI V++GA         R   +  L++ 
Sbjct: 280 YDQAYPVDGLKTGTTDAAGACFIGTVNHAGARLITVVMGARHKDGTDPARFMQTKKLMNY 339

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN----TQMKEAKDKES 318
            F         N   +    +N+     + +      +++   ++      +    +K++
Sbjct: 340 VFTKYRPVT-FNAGSQMAGVKNIKVTDGDNATTNLGLKEKTTIWDPADGKTLVAKLNKQT 398

Query: 319 HFIDFEKITLLKN 331
                 K  ++ N
Sbjct: 399 IEAPITKGQVVGN 411


>gi|254976092|ref|ZP_05272564.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           QCD-66c26]
 gi|255093481|ref|ZP_05322959.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile CIP
           107932]
 gi|255315225|ref|ZP_05356808.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           QCD-76w55]
 gi|255517894|ref|ZP_05385570.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           QCD-97b34]
 gi|255651009|ref|ZP_05397911.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           QCD-37x79]
 gi|260684078|ref|YP_003215363.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile CD196]
 gi|260687737|ref|YP_003218871.1| D-alanyl-D-alanine carboxypeptidase [Clostridium difficile R20291]
 gi|260210241|emb|CBA64492.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           CD196]
 gi|260213754|emb|CBE05676.1| D-alanyl-D-alanine carboxypeptidase (putative sporulation-specific
           penicillin-binding protein) [Clostridium difficile
           R20291]
          Length = 429

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/353 (22%), Positives = 137/353 (38%), Gaps = 38/353 (10%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
               + S+   F          +  L+D  +G ++     +    PAS TK+ TA +V  
Sbjct: 15  FTSFLGSSNISFADNEPAIVAKHAVLMDYESGKILYNKDGNSKLYPASTTKVWTACLVLK 74

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            +K     L   I I K+  +   S+   K G + T+   L  L+V SAND A  +A  +
Sbjct: 75  EVK----DLNQVIEI-KDLPQIDGSSMYLKNGESFTVKQLLDALLVHSANDAAFVLARYV 129

Query: 128 -CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------ 180
                +KF+  MN+ +K +G + THF N HG+    HYTTA DMA+++     +      
Sbjct: 130 GGGNVQKFIDLMNSEAKKIGATNTHFNNPHGLPDPNHYTTAHDMALIAREAMNNDTFRQI 189

Query: 181 --------------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                           +       K L    K           +   DG+KTG+T A+G 
Sbjct: 190 VKTKSLKFEATKAYPYERYFVNTNKFLTSHDKITYKGQPINIKYDIVDGIKTGYTDAAGK 249

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT------DRKKINYIIKDF 280
            +++SA++  + +I  +  +         S  L+  GF N          K  +     F
Sbjct: 250 CLLSSAVKDGRRVIVAVFNS-TNADLYLDSRILIDYGFDNFKCATIVDKEKYTDTKKVLF 308

Query: 281 YQQNLSNEVPNISEEVCTTQKEII-NYNTQMKEAKDKESHFIDFEKITLLKNK 332
            +Q+     P  S  +   + E   NY+T+ +  K      +  +K   +   
Sbjct: 309 TKQHELIYEPKNSYRIFLEKDESQGNYDTKTELNK----IDLPIKKGAKVGTL 357


>gi|302024467|ref|ZP_07249678.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis 05HAS68]
          Length = 402

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 136/357 (38%), Gaps = 31/357 (8%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           M       P L+   +    +   ++ ++G ++ E   +   + AS++K ++ Y+V+  L
Sbjct: 1   MLYFFTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISKTLSIYLVYEAL 60

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKG---STMTLDNALKLLIVKSANDIAVAIAES 126
            + +  L T + IS        +           + ++ + L   ++ S+N   +A+AE 
Sbjct: 61  AKGEITLDTMVDISDYPYSLTSNTELSNVNLDARSYSVRDLLNASLITSSNSAIIALAEK 120

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAI 172
           +  +E  FV  M    +  G++ T  +N  G+                  +  +A D+AI
Sbjct: 121 IAGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPGSSPEDVNMFSALDVAI 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNI 228
           ++ R+  D+PQ +    +   +  G  Y +TN  +        G DG+KTG + ++G + 
Sbjct: 181 IARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSF 240

Query: 229 VASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------ 278
           +A+  Q    +I V+L A         R   +  L++  + N +    +           
Sbjct: 241 LATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLVKKGEAFEDSKI 300

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
             +           + ++   Q++  +         D +      +  TL+     K
Sbjct: 301 KVFNGEKETSPVVAAADLTVVQRKQTDNVPTATFTTDIKEIDAPLKAGTLVSKLQLK 357


>gi|291539057|emb|CBL12168.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis XB6B4]
          Length = 423

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 129/346 (37%), Gaps = 34/346 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                  +       L+D ++G ++ E         AS TK++T  +           L 
Sbjct: 47  TEKPDQNSLYAKAAVLMDADSGSILYEKNGHQAMANASTTKILTCIIALENCD-----LD 101

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           + +T+S  A+  P  +   ++G    L + L  L+++S ND AVAIAE +  T   F + 
Sbjct: 102 SEVTVSTLAASQPKVHLGMREGQKFYLKDLLYGLMLESYNDCAVAIAEHIAGTTGDFAKL 161

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           MN+ ++ +G   ++F+  +G+        H+TTA D++++             +  I   
Sbjct: 162 MNDKAEEIGCEDSYFITPNGLDAKNENGFHHTTAADLSLIMRYCIKTSEMAEQFLTITRE 221

Query: 194 EI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                            N N  +    GA   KTGFT  +G+  V +  + D++ I  +L
Sbjct: 222 GQYQFSDIDGKNSYTCCNHNAFLQMMDGALSGKTGFTGNAGYCYVGALKRDDRTFIVALL 281

Query: 245 GALDRNT---RNKVSASLLSMG---FYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
                N    +   +  L+  G   F   +  +      +    Q +  +   I EEV T
Sbjct: 282 ACGWPNNKTYKWADTKKLMQYGISRFRKISLDEIELDAGEYAPVQVVDGQGTKIGEEVTT 341

Query: 299 -TQKEIINYNTQMKEAKDKESHF---------IDFEKITLLKNKIT 334
             +   +  N ++   KD+E H              +   +     
Sbjct: 342 ELEVAPVKENVELLIEKDQEVHIEYQLSRKLYAPVTEGDFIGEITY 387


>gi|92110365|emb|CAJ87634.1| putative penicillin binding protein 6b [Escherichia coli]
          Length = 335

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 11/286 (3%)

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLL 111
           KLMT YVV   +   +      +T+ ++A                K+G  +++ +  + L
Sbjct: 13  KLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGL 72

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           IV S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A
Sbjct: 73  IVDSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLA 132

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVA 230
           +LS  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN++A
Sbjct: 133 VLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIA 192

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLS 286
           SA+ G + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  
Sbjct: 193 SAVDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKE 252

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           N      +E      +    + + K   D +           +   
Sbjct: 253 NIALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 298


>gi|206975818|ref|ZP_03236729.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           H3081.97]
 gi|217962879|ref|YP_002341457.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           AH187]
 gi|206745912|gb|EDZ57308.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           H3081.97]
 gi|217067221|gb|ACJ81471.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           AH187]
          Length = 423

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++   I+ + +LS  ++    S AE     +     L D +TG ++ E  PD     AS
Sbjct: 1   MKKIFSILLVFLLSISSLVVTTSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLAIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + +S  A E   +N              ++ L    
Sbjct: 61  MSKLIVVYAVLEAIKEGKITWDTKVNVSDYAYEVSRNNEFSNVPFEKGRQYTVRELYHSI 120

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 121 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 180

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  + T +P+ +   + +         K  +  N NW       
Sbjct: 181 DPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 240

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 241 AYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFNNFE 300

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            Q           +E+    K+      ++    DK          
Sbjct: 301 KQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKIGTEVDKSLAEDGHLIA 360

Query: 322 DFEKITLLKNKITK 335
             +K   + +   +
Sbjct: 361 PIKKDAKVGSITLE 374


>gi|225552024|ref|ZP_03772964.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia sp. SV1]
 gi|225371022|gb|EEH00452.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia sp. SV1]
          Length = 405

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/352 (23%), Positives = 135/352 (38%), Gaps = 31/352 (8%)

Query: 3   QFLVIIAMAM------LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           + L+ + +        L  +        +       L+D +T  ++    P+  + PASL
Sbjct: 9   KLLLTLFLIFSPFCYNLFAVNLAEINKLSEYAKSIVLMDFDTKRILYSKKPNLVFPPASL 68

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN----STFKKGSTMTLDNALKLLI 112
           TK++T Y      +++   L + + IS +AS Y           +KG  +  +  LK L 
Sbjct: 69  TKIVTIYTALIEAEKRNIKLKSIVPISDSASYYNAPPNSSLMFLEKGQIVNFEEILKGLS 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V S ND ++AIAE +      FV  MN    NLGL   HF+   G     +  TA DMA 
Sbjct: 129 VSSGNDSSIAIAEFVVGNLNSFVNLMNINVLNLGLFNMHFVEPSG-YSSENKITALDMAF 187

Query: 173 LSWRIKTDFPQYMHYFQIKGL--------------EIKGKKYPNTNWAVGTFLGADGMKT 218
                   F   ++   +K                +    K  N N  +  +  +DG+KT
Sbjct: 188 FVKSYIEKFKFMLNIHSLKYFIYPKSKNLGTALSSKFLNLKQRNANLLIYDYPYSDGIKT 247

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILG------ALDRNTRNKVSASLLSMGFYNKTDRKK 272
           G+   SG N+VA+A +G++ LIAV+LG            R+ ++ +L   GF   +    
Sbjct: 248 GYIKESGLNLVATAKKGERRLIAVVLGVEKGINGFGEKMRSSIAKNLFEYGFNEYSKFPL 307

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
           I  + +  Y            E       +       +    DK    +  +
Sbjct: 308 IVKLKEKVYNGTADTVALFSKEPFYYILTKDEFDKINISYTVDKLVAPLSGD 359


>gi|293375502|ref|ZP_06621781.1| putative D-alanyl-D-alanine carboxypeptidase [Turicibacter
           sanguinis PC909]
 gi|325844936|ref|ZP_08168301.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
 gi|292645902|gb|EFF63933.1| putative D-alanyl-D-alanine carboxypeptidase [Turicibacter
           sanguinis PC909]
 gi|325488986|gb|EGC91375.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
          Length = 368

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 17/316 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             + A         L++  TG V+ E  PD     AS+TK++T+ V     +     L  
Sbjct: 23  QTANAMGISSTCGILMEQTTGRVLFEKCPDEQMYIASITKILTSIVAIENGQ-----LDE 77

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S NA+    S+     G  M L + +  L+++S ND A+ IAE++   E  FV+ M
Sbjct: 78  WVEVSDNATRQVGSSLYLALGDQMKLIDVIYGLMLRSGNDGAMVIAEAVGGDEAGFVKMM 137

Query: 139 NNTSKNLGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQY----MHYFQIKGL 193
           N  +K +G+  + F N  G+ +   + +TARDMAIL      +            +    
Sbjct: 138 NEKAKEIGMKNSIFQNPSGLDETTYNLSTARDMAILMQYAMNNPIFREVTGTETHKATSK 197

Query: 194 EIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                 + N +    G +  A G KTGFT  +   +V SA + D  L+ V L A D    
Sbjct: 198 NGTPYVWHNKHKLVTGYYEYAIGGKTGFTERARRTLVTSARKDDLELVVVTLKAGDD--- 254

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE--IINYNTQM 310
                SL + GF N   +K I      + +   S E   + + V    K+    +  T++
Sbjct: 255 WNDHMSLFNYGFDNYELKKVIEAGQL-YGEDLNSTEKLYVKDTVYLAVKKDGSESVTTEL 313

Query: 311 KEAKDKESHFIDFEKI 326
              +  ++  +   KI
Sbjct: 314 VLYESPKTDEVGTLKI 329


>gi|291563060|emb|CBL41876.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SS3/4]
          Length = 461

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/337 (20%), Positives = 118/337 (35%), Gaps = 34/337 (10%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +           LLD +TG ++           AS TK+MT  +           L T +
Sbjct: 91  TDPLNLNAHAAVLLDGDTGRILYGKNEKKVLPMASTTKIMTCILALENS-----GLDTEV 145

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS  A+  P       KG    L++ L  L+++S ND AVAIAE++  + + F   MN 
Sbjct: 146 EISDRAASMPEVKLHAGKGEKYRLEDLLYSLMLESHNDTAVAIAEAVGGSVENFADMMNG 205

Query: 141 TSKNLGLSATHFMNAHGVVQHG------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
            +  LG   T+F+  +G+          H TTA D+A +     +  P    +  I    
Sbjct: 206 KAAELGCDDTYFLTPNGLDAEDKESGKIHSTTAADLARILRYCISLSPAKEEFLAITRAP 265

Query: 195 ---------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                     +     N N  + +  GA   KTGFT  +G+  V +  + ++  IA +L 
Sbjct: 266 SHAFSDLSGTRSFSCVNHNALLTSMEGAVSGKTGFTGKAGYCYVGAVKKDEKLFIAALLD 325

Query: 246 ALDRNTR---NKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNI------- 292
                 R    +    L++ G  N   ++     +        +N       +       
Sbjct: 326 CGWPPHRTYKWQDMRKLVTYGDKNFEYKEIEKTGLGEETAVLVENGVESRVKVEIGTEHA 385

Query: 293 -SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               +            + K AK   +   +   +  
Sbjct: 386 DRNSLRVLLGNDEKVQVRTKIAKSLHAPVREGTPVGQ 422


>gi|154483906|ref|ZP_02026354.1| hypothetical protein EUBVEN_01611 [Eubacterium ventriosum ATCC
           27560]
 gi|149735397|gb|EDM51283.1| hypothetical protein EUBVEN_01611 [Eubacterium ventriosum ATCC
           27560]
          Length = 494

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 142/352 (40%), Gaps = 33/352 (9%)

Query: 1   MRQFL--VIIAMAMLSNIF---------------PFLSIAETNKLPYYTLLDTNTGHVIA 43
           M++ +  ++I + ++S+                        +       L++ +TG V+ 
Sbjct: 12  MKKIISKILIVILLISSCIGTINVEPVTVNAATKTNWPKGPSIYGQTGVLIEASTGTVLY 71

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           +   +    PAS+TK+MTA +     K  +  + T    + ++ +Y  +N     G  MT
Sbjct: 72  DKKCNKKMYPASITKIMTALLTIENCKMDE--MVTFSDATIHSIQYGDANMGCSVGEKMT 129

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           + + L  L+++SAN++A A+ E +  + K F + MN  +K  G   THF NA+G+    H
Sbjct: 130 VKDCLYALMLQSANEVATALGEHIAGSTKNFAEMMNKRAKEAGALNTHFANANGLHDPNH 189

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN------------TNWAVGTFL 211
           Y TA DMA+++    + +  +          IK                     +   + 
Sbjct: 190 YVTAYDMAMITR-AASKYSVFNDIVNTTTYTIKHNNKRKTDATAIQRHKMVWPTSGYYYD 248

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           G  G KTGFT  SG  +V  A +   +LIAV+L +   N   K +  LL  GF N   + 
Sbjct: 249 GIIGGKTGFTDQSGTTLVTYAKRNGMTLIAVVLHSNGTNV-YKDTKELLDYGFNNFGLQN 307

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
             N   +      ++ + P  +        +  N          + +  + F
Sbjct: 308 VSNNDQRFDSDNKVTLQSPFCNTTDSIYIDKTSNIVLPKTAKFSQLTSDVKF 359


>gi|319651403|ref|ZP_08005532.1| DacB protein [Bacillus sp. 2_A_57_CT2]
 gi|317396934|gb|EFV77643.1| DacB protein [Bacillus sp. 2_A_57_CT2]
          Length = 374

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 123/323 (38%), Gaps = 16/323 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++A A++    P  + A  +       L++ ++G ++ +   +     AS+TK+MTA +
Sbjct: 1   MVLATALMMMNIPQKAEASVSVSARSAILMEQDSGRILYQKDANEVRRIASITKIMTAIL 60

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                K     +   + +S  A     S+   K G  + L++ +  L+++S ND AVAIA
Sbjct: 61  AIESGK-----MDDMVKVSDRAVRAEGSSIYLKAGEKIKLEDLVYGLMLRSGNDSAVAIA 115

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  + + F   MN  ++ +G+  THF N HG+  H  + +      L  R   +   Y
Sbjct: 116 EHVGGSLEGFGFLMNKKAEEIGMKNTHFANPHGLDDHEDHYSTAYDMALLTRYAMNNETY 175

Query: 185 MHYFQIKGLEIKGKK------YPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                 K              + N N  +   +    G KTG+T  +   +V +A +G  
Sbjct: 176 QKIAGTKVHRAPNPNESWDRVWKNKNRLLTELYEYCTGGKTGYTKRAKRTLVTTASKGSL 235

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
           +LIAV L   D         ++    F      + +   I D   +        +     
Sbjct: 236 NLIAVTLNGPDD---WNDHINMYETAFKTYDIVEVLPEGIIDDIDEEYYKGKVYLKHPYH 292

Query: 298 TTQKEIINYNTQMKEAKDKESHF 320
               +      ++     K    
Sbjct: 293 YPVLKGEKDKFKINIELQKPETE 315


>gi|312862634|ref|ZP_07722875.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis F0396]
 gi|311101894|gb|EFQ60096.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis F0396]
          Length = 417

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 144/366 (39%), Gaps = 35/366 (9%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++   +++I + ++    P L+  +T        +   ++T TG V+ E     P   A
Sbjct: 3   MKKLQHIIMITLILIGLATPALAQEQTDDFNVAAKHAIAIETTTGKVLYEKDATTPDGVA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TK++TAY+V+  + + K    T + IS            ++        T+   L   
Sbjct: 63  SMTKILTAYMVYKAVDQGKINWDTEVDISDYPFNLTVDSEVSNIPLDSRKYTVKQLLDAT 122

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++ SAN  A+A+AE +  TE  FV  M    K  G++     NA G+             
Sbjct: 123 LISSANSAAIALAEKISGTESAFVDTMTAQLKEWGITDAKLFNASGLNNKYLGDNRYPGS 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A D+AI++  +  D+PQ +   +    +     K    N+          G
Sbjct: 183 KPDDENTMSALDVAIIADHLIKDYPQVLEITKQTETDFEGDNKLTTHNYMLEGQDNYREG 242

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTRNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   SLI +++    G  D   R   +  LL     N  
Sbjct: 243 VDGLKTGTTELAGASFVAHSNEHGMSLITIVMNADNGGEDEAARFTATNELLDYVTQNWE 302

Query: 269 DRKKINYI--IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-ESHFIDFEK 325
            +        +K    +    +   IS ++ +    +   N++    K K ++     +K
Sbjct: 303 IKTLNTKGQIVKKNDIKVADRDSQTISAKLESDLIVVQKINSKNDAVKIKAKTITAPIKK 362

Query: 326 ITLLKN 331
              +  
Sbjct: 363 GNTIGT 368


>gi|24378762|ref|NP_720717.1| putative D-alanyl-D-alanine carboxypeptidase; penicillin-binding
           protein [Streptococcus mutans UA159]
 gi|24376631|gb|AAN58023.1|AE014874_9 putative D-alanyl-D-alanine carboxypeptidase; penicillin-binding
           protein [Streptococcus mutans UA159]
          Length = 414

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 144/368 (39%), Gaps = 33/368 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ + ++ + +    F   +         +   ++ NTG ++ E   D     AS+TK+
Sbjct: 2   MKKIVCLLFILISLIGFGVKAEENFDVSAKHAIAVEANTGKILYEKDADTTAGIASITKM 61

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  +K      ++ + IS       +   +++        T+   ++  ++ SA
Sbjct: 62  LTVYMVYKEIKSGDLTWSSKVKISDYPYSLTKDYSASNVPMDAREYTVKELVEASMIASA 121

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HG 162
           N  A+A+AE +  TE KFV  M    +  G++    +NA G+                  
Sbjct: 122 NSAAIALAEKVGGTEPKFVDMMKKQLQEWGITDAKLVNASGLNNKTLGDHIYPDSSSEDE 181

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +ARD+AI++  +  +FPQ +   +    +  G K    N+ +        G DG+KT
Sbjct: 182 NMMSARDVAIVAHHLIKEFPQVLKITEKTNSDFSGNKMETYNYMLPNMPYAREGVDGLKT 241

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILG-----ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           G T  +G   VA++ +    LI+V+L      + D   R + + +LL+           I
Sbjct: 242 GTTELAGACFVATSKENGMRLISVVLNADKSDSDDDAARFQATNNLLNYVNNTYEPITLI 301

Query: 274 NYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
           +                 +       +     Q ++ +    +  A  K  +    +K  
Sbjct: 302 HKGQTYQGSKVKVIDGKRTTVPAVAKKNFTVIQNKLSHKKNTVSIASKKNGYTAVIKKGQ 361

Query: 328 LLKNKITK 335
           L+     K
Sbjct: 362 LVAKATFK 369


>gi|228951945|ref|ZP_04114043.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229069121|ref|ZP_04202413.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|229078751|ref|ZP_04211305.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|229177976|ref|ZP_04305348.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
 gi|228605464|gb|EEK62913.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
 gi|228704624|gb|EEL57056.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228714066|gb|EEL65949.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|228807868|gb|EEM54389.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 363

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/308 (25%), Positives = 117/308 (37%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 18  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMK-----EMVSVSN 72

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 73  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNQKAKE 132

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 133 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 191

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +    LI V L A           +L 
Sbjct: 192 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKDGLDLIVVTLSASSD---WDDHMNLF 248

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K    K    
Sbjct: 249 DKGFERFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEEKKNVVLKVELHKSIKL 308

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 309 TDGVKVGK 316


>gi|199597923|ref|ZP_03211348.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus HN001]
 gi|258507249|ref|YP_003170000.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus GG]
 gi|199591180|gb|EDY99261.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus HN001]
 gi|257147176|emb|CAR86149.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus GG]
 gi|259648615|dbj|BAI40777.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus GG]
          Length = 436

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/387 (15%), Positives = 123/387 (31%), Gaps = 55/387 (14%)

Query: 1   MRQFLVIIAMAMLSNIF------------PFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++ L  +  AM++ +                S            ++  TG V+      
Sbjct: 1   MKKLLRGLVAAMVAVLMIGGAAPAVSVAAAESSDTNLVNAKAAVAIEPTTGKVLYAKNAS 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TK+++  +V   +K  K      +T+ ++                     ++
Sbjct: 61  TVLPIASMTKMISIELVLDAIKSGKIKWDDKVTLDQSIWTISQDRDLSNVPLRRDGSYSV 120

Query: 109 KLLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
           + L   S    A A       ++  +++KFV  M+   K+ G++    +N  G+      
Sbjct: 121 RELYDASLIYSANAAMMLLAKAVAGSQEKFVNQMDAKLKSWGITDAKIVNVTGLNNSQLK 180

Query: 159 --------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW 205
                       +  +A+DMA ++  +  D P+ +    I     +          N +W
Sbjct: 181 DAKVPGTGDNAENEMSAKDMAQVAQHLIKDHPEVLKTTSIARQTFRKGTDDAINMENWDW 240

Query: 206 A------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSA 257
                      L  DG+KTG + A+G     +  +    +I V+L A    +  R   + 
Sbjct: 241 MLKGLVSYDKNLPVDGLKTGTSDAAGDCFTGTVEKNGMRIITVVLHANGDAKTRRFDETK 300

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSN------------EVPNISEEVCTTQKEIIN 305
            L++    N       N          ++                 ++       K+ + 
Sbjct: 301 KLMTHVLENWKTITLANAGQSIKGYSKVNVNRGASRTTPIAPSAKAVAVVPTDASKKTLK 360

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNK 332
           Y     +   K +     +K T + N 
Sbjct: 361 YTYTPAKGVKKNTIEAPVKKGTTIGNL 387


>gi|51598858|ref|YP_073046.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia garinii PBi]
 gi|51573429|gb|AAU07454.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia garinii PBi]
          Length = 401

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 78/321 (24%), Positives = 124/321 (38%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLMDFDTKRILYSKNPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 100 YYNAPLNSSLMFLEKGQIVNFEEILKGLSVSSGNDASIAIAEFVVGDLNSFVNLMNINVL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSGYSN-ENKITALDMAFFVKSYIEKFKFMLNIHSLKYFVYPKSKNLGT 218

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-- 247
                    K  N N  +  +  +DG+KTG+   SG N+VA+A +  + LIAV+LG    
Sbjct: 219 TLSSKFLNLKQKNANLLISDYPYSDGLKTGYIKESGLNLVATAQKDGRRLIAVVLGVKKG 278

Query: 248 ----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R  ++  L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGLGEKMRALIAKDLFEYGFNEYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYVLTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                ++    DK    +  +
Sbjct: 339 EFDKLKISYTVDKLVAPLSGD 359


>gi|225163790|ref|ZP_03726088.1| Serine-type D-Ala-D-Ala carboxypeptidase [Opitutaceae bacterium
           TAV2]
 gi|224801583|gb|EEG19881.1| Serine-type D-Ala-D-Ala carboxypeptidase [Opitutaceae bacterium
           TAV2]
          Length = 310

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 20/284 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---------KLPYYTLLDTNTGHVIAENYPDHPW 51
           MR  L  +   + +++      A+               Y + D  TG V+ E   D P 
Sbjct: 1   MRIILPFVLGLLAASLASPAHAAKPAAVPPPATTGAHRGYIVTDAATGRVLLEENSDAPN 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TKLMT  VV   +  ++    TP+TIS  A     S    +     T+D+ L  L
Sbjct: 61  PPASVTKLMTFLVVHDKITARQLSFDTPVTISLEAQRMGGSQVYLETQERFTVDDLLYAL 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------QHGHYT 165
           +V+SAND A+A+AE+   + + FV+ MN  +  LG++ T +   HG+       Q     
Sbjct: 121 MVQSANDAAIALAEAAAGSREAFVELMNTRAHQLGMTHTTWRTPHGLPPNTSLGQEPDLA 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLGADGMKTGFT 221
           + RD+A+LS  +  +    + Y   K  + +         N N  +    G DG+KTG+ 
Sbjct: 181 SPRDIALLSRHLLLN-TDILRYTSTKTRDFRPGPKVQAMKNHNHLLWRVNGCDGLKTGYY 239

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
             +GF++ A+  + D+ +I V LG  +R  R+ + ASL+  GF 
Sbjct: 240 AKAGFSLAATVQRNDRRIIVVTLGVPERKQRDVLVASLIEKGFA 283


>gi|301299390|ref|ZP_07205670.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852996|gb|EFK80600.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 402

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 139/337 (41%), Gaps = 31/337 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS- 83
             +      +D  TG +I        +  AS++KL+TAY++   + + +    T +T + 
Sbjct: 22  DLEAKSAIAVDAKTGQIIYAKDDKQTYPVASMSKLLTAYILLQAIHKGEITWETRVTPTA 81

Query: 84  ---KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                ++    +N   ++G + T+    + ++V SAN   + I  ++  T+ KF+  M  
Sbjct: 82  TEVDISNNTELTNVPLQEGHSYTIRQLYQAMLVGSANAATMLIGNAISGTQTKFIDKMRE 141

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
           T+K+LG++     +A+G+                  +  + RDMAI+S ++  ++P+ + 
Sbjct: 142 TAKSLGITDAKIYSANGLTAKYLGDEIYPNTDENAENEFSVRDMAIISQKLIKEYPEILE 201

Query: 187 YFQIKGLEIKGK----KYPNTNWAVGTFLG--ADGMKTGFTCASGFNIVASAIQGDQSLI 240
             ++  ++           NTN  +        DG+KTG + A+G+   ++  +    +I
Sbjct: 202 TTKLTKIDFNDNGEITTVNNTNELLQDDSNLEVDGLKTGTSDAAGYCFASTTNKDGHRII 261

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNK------TDRKKINYIIKDFYQQNLSNEVPNISE 294
            VI GA D + R   + +LL+  + N       T++     +   + +Q+  + +     
Sbjct: 262 TVIAGAKDNDARFDQTKNLLNYIYNNYDYLAISTNQALRQDVKVKYGKQSSISTIIGNDL 321

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
            +   +             K   +     ++   + +
Sbjct: 322 SLWVPKNTRAKALQIKLTPKS-STIEAPIKQGETVGD 357


>gi|300854527|ref|YP_003779511.1| D-alanyl-D-alanine carboxypeptidase [Clostridium ljungdahlii DSM
           13528]
 gi|300434642|gb|ADK14409.1| D-alanyl-D-alanine carboxypeptidase precursor [Clostridium
           ljungdahlii DSM 13528]
          Length = 413

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 81/342 (23%), Positives = 137/342 (40%), Gaps = 13/342 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
              I    +  N+    S A           +D  T  +I E   D    PAS TKL+TA
Sbjct: 10  LTFIFIFCLSFNVLADNSTALPEIYGKAAITVDMQTNEIIYEKNADIKMYPASTTKLLTA 69

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            ++    K    +  T    S+  S         + G TM+ ++ +  L++ SAND+A  
Sbjct: 70  ILLEKNKKPGDMLTYTADAKSQPPSSLNRDLHAIEVGDTMSAEDVMDGLLMYSANDLAYV 129

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR----IK 178
           +AE++ K    F   MN   KNL L  THF+  +G+    HYTT  DM++++ +     +
Sbjct: 130 VAENVSKDAPTFSDKMNEEVKNLNLKNTHFVTPNGLHNPNHYTTPYDMSVIARQAFKIPR 189

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                      IK  +       NTN  +G   G    KTG+T  +G  +VA   +  + 
Sbjct: 190 IQKAMERPANTIKTTKGLAFPIKNTNKLLGK-DGCIAGKTGYTDPAGRCLVAIYNRNGRE 248

Query: 239 LIAVILGA---LDRNTRNKVSASLLSMGFYNKT---DRKKINYIIKDFYQQNLSNEVPNI 292
           ++ V++G+      +        +++  +  +    ++K      K+     +S      
Sbjct: 249 MVGVVMGSVYDPADSYVFNDMEKIINWSYSKQPVVLNKKDSIIGRKEVSYNPISFIGIKK 308

Query: 293 SEEVCTTQKEIINYNTQMKEAKD-KESHFIDFEKITLLKNKI 333
           S EV    K+ + Y       KD KE   I    +  LK ++
Sbjct: 309 SLEVPIKIKDDVTYYDNDLNKKDLKEIISIKNTSVEALKGEV 350


>gi|239623520|ref|ZP_04666551.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521551|gb|EEQ61417.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 427

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 124/342 (36%), Gaps = 42/342 (12%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D ++G ++     D     AS TK+MT  +           L   +T S 
Sbjct: 45  KLYAQSAVLMDGSSGRILYGKGQDIIRPMASTTKIMTCILALE-----LGNLDDKVTASS 99

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+  P  +   + G    L++ L  L+++S ND AV IAE++  + + F   MN  ++ 
Sbjct: 100 YAASQPKVHLGVRSGEEYRLEDLLYALMLESYNDAAVMIAENIGGSVEDFAALMNQKAEE 159

Query: 145 LGLSATHFMNAHGVV---------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           LG   T+F+  +G+          +H H TTA D+A +      + P+   +  I   + 
Sbjct: 160 LGCRDTYFITPNGLDGVKKDKDGVEHIHSTTAADLAAIMRYCVMESPKKEEFLSITRTQN 219

Query: 196 KGKK---------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                          N N  +    G    KTGFT  +G++ V +     ++ +  +LG 
Sbjct: 220 HTFTDSSGRRSYSCFNHNAFLNMMEGVLSGKTGFTGGAGYSYVGAMENDGRTYVIALLGC 279

Query: 247 ---LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY--------------QQNLSNEV 289
                +  +   +  L + G  +   +      +                  Q++    +
Sbjct: 280 GWPPHKTYKWADARKLYTYGLEHFQLKDVFREEVLPDIPVTGGLCWEEEGTCQESTGASL 339

Query: 290 PNISEEVCTT--QKEIINYNTQMKEAKDKESHFIDFEKITLL 329
              +EE+       E        K     ++   + +KI  +
Sbjct: 340 HLKAEEMHLPLLLGEDEEVQVTKKIPAVLQAPVREGQKIGTI 381


>gi|222098861|ref|YP_002532919.1| d-alanyl-d-alanine carboxypeptidase, putative [Bacillus cereus Q1]
 gi|221242920|gb|ACM15630.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus Q1]
          Length = 423

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 79/377 (20%), Positives = 138/377 (36%), Gaps = 45/377 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN--------TGHVIAENYPDHPWN 52
           M++   I+ + +LS     ++   T+       ++          TG ++ E  PD    
Sbjct: 1   MKKIFSILLVFLLSISSLGVT---TSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLA 57

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS++KL+  Y V   +KE K    T + +S  A E   +N              ++ L 
Sbjct: 58  IASMSKLIVVYAVLEAIKEGKITWDTKVNVSDYAYEVSRNNEFSNVPFEKGRQYTVRELY 117

Query: 113 VKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV---------- 158
                  A   + +L +    +EK F+   N  +K LGL    F+NA G+          
Sbjct: 118 HSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHP 177

Query: 159 ----VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA--- 206
                   +  +ARDM ILS  + T +P+ +   + +         K  +  N NW    
Sbjct: 178 EGTNPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPG 237

Query: 207 -VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF 
Sbjct: 238 AAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFN 297

Query: 266 NKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----S 318
           N   +K            Q           +E+    K+      ++    DK       
Sbjct: 298 NFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKIGTEVDKSLAEDGH 357

Query: 319 HFIDFEKITLLKNKITK 335
                +K   + +   +
Sbjct: 358 LIAPIKKDAKVGSITLE 374


>gi|154686564|ref|YP_001421725.1| DacB [Bacillus amyloliquefaciens FZB42]
 gi|154352415|gb|ABS74494.1| DacB [Bacillus amyloliquefaciens FZB42]
          Length = 383

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/318 (20%), Positives = 119/318 (37%), Gaps = 11/318 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL+   +                      ++D  +G V+      H    AS+TK+MTA 
Sbjct: 10  FLLTFVILFSITDGNTAHAQIHVSAKSAIIIDGASGRVLFAKDEHHKRRIASITKIMTAV 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     K     +   +T+S NA +   S    + G  + L + +  L+++S ND A AI
Sbjct: 70  LAIESGK-----MEETVTVSPNAVKTEGSAIYLQPGQKVKLKDLVYGLMLRSGNDAAAAI 124

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  +   FV  MN  ++ +G+  T F N HG+  H +  +      L  +      +
Sbjct: 125 AEYVGGSLDGFVFMMNKKAEQIGMENTKFQNPHGLDDHENLYSTAYDMALLTKYAMKIKE 184

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           Y      K  + +       N      G +  + G KTG+T  +   +V++A +    LI
Sbjct: 185 YRTVSGTKVYKAETMDRVWKNKNKLLTGLYRYSTGGKTGYTKIAKRTLVSTASKDGTDLI 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV +   D         ++ +  F +               ++    +   I+ +V    
Sbjct: 245 AVTINDPDD---WDDHMNMFNYVFEHYKTYVVAKKGGIPKLKKTFYGKRAFIARDVKYLL 301

Query: 301 KEIINYNTQMKEAKDKES 318
           KE    + +++    K  
Sbjct: 302 KEDEIDDVKIRTTLIKPK 319


>gi|291536086|emb|CBL09198.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis M50/1]
          Length = 414

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 127/323 (39%), Gaps = 25/323 (7%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                  +       L+D ++G ++ E         AS TK++T  +           L 
Sbjct: 38  TEKPDQNSLYAKAAVLMDADSGRILYEKNGHQAMANASTTKILTCIIALENCD-----LD 92

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           + +T+S  A+  P  +   ++G    L + L  L+++S ND AVAIAE +  T   F + 
Sbjct: 93  SEVTVSTLAASQPKVHLGMREGQKFYLKDLLYGLMLESYNDCAVAIAEHIAGTTGDFAKL 152

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           MN+ ++ +G   ++F+  +G+        H+TTA D++++             +  I   
Sbjct: 153 MNDKAEEIGCEDSYFITPNGLDAKNENGFHHTTAADLSLIMRYCIKTSEMAEQFLTITRE 212

Query: 194 EI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                            N N  +    GA   KTGFT  +G+  V +  + D++ I  +L
Sbjct: 213 GQYQFSDIDGKNSYTCCNHNAFLQMMDGALSGKTGFTGNAGYCYVGALKRDDRTFIVALL 272

Query: 245 GALDRNT---RNKVSASLLSMG---FYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
                N    +   +  L+  G   F   +  +      +    Q +  +   I EEV T
Sbjct: 273 ACGWPNNKTYKWADTKKLMQYGISRFRKISLDEIELDAGECAPVQVVDGQGTKIGEEVTT 332

Query: 299 -TQKEIINYNTQMKEAKDKESHF 320
             +   +  N ++   KD+E H 
Sbjct: 333 ELEVAPVKENVELLIEKDQEVHI 355


>gi|168334024|ref|ZP_02692243.1| D-alanyl-D-alanine carboxypeptidase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 426

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 79/363 (21%), Positives = 137/363 (37%), Gaps = 35/363 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M + L+ I + +   IFP + IA            L+D  TG ++ E    + + PAS+T
Sbjct: 1   MNKQLIKIMLCVFLLIFPKICIAQEVPKINAEAAILMDAKTGTILYEKNAYNRYYPASIT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           KLMTAY+               IT S +   + +   S    ++G  + +D AL  L++ 
Sbjct: 61  KLMTAYLAIQH-----LNPNDYITFSNHAVTSIDSDSSRIGMREGEKLLVDQALHALLLD 115

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND+A A+ E++  T + F Q M  T+ + G +AT+F N HG+    HYTT  DMA+++
Sbjct: 116 SANDVANALGEAVSGTTENFAQLMTKTAHDFGATATNFANPHGLHNSKHYTTPYDMALIT 175

Query: 175 WRIKTDFPQYMHYFQIKGLEI------------KGKKYPNTNWAVGTF-LGADGMKTGFT 221
             I  D                           +     N       +       KTG+T
Sbjct: 176 KAIYNDEYLREIMDTPTYQIPSTNLSNKTIYLSQSHALMNPIRDSQRYREDVILGKTGYT 235

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             +G  +V    +G+  LI VI+           + +LL  GF + T             
Sbjct: 236 TPAGNTLVTVGKRGEVELIVVIMKGH-LQNYYNDTNALLDYGFKSYTALNLNTPNEVITV 294

Query: 282 QQNLSNEVPNI----------SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
               S +   +           +++    +  +           +E+  +  ++   +  
Sbjct: 295 APLYSIQSGKLFEVATCEISTKDKISIVVRSNVYKKDLEVIMDLEENLRLGAKEGDTVGT 354

Query: 332 KIT 334
              
Sbjct: 355 ITY 357


>gi|228920278|ref|ZP_04083626.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839477|gb|EEM84770.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 363

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 79/308 (25%), Positives = 119/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K K       +++S 
Sbjct: 18  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAQSGKMK-----EMVSVSN 72

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 73  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNQKAKE 132

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 133 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 191

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +G   LI V L A           +L 
Sbjct: 192 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKGGLDLIVVTLSASSD---WDDHMNLF 248

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K   DK    
Sbjct: 249 DKGFERFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEERKNVLLKVELDKSIKL 308

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 309 EDGVKVGK 316


>gi|229014554|ref|ZP_04171670.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
 gi|228746706|gb|EEL96593.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
          Length = 425

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T +TIS  A E   +N    
Sbjct: 45  TGKILHEQNPDELLAIASMSKLIVIYAVLEAIKEGKITWDTKVTISDYAYEVSRNNEFSN 104

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 105 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 164

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 165 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKIIITKYPEMLEDTKQRFRNFPDNH 224

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ GADG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 225 PKPIRMENWNWMLPGAAFSYEGADGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 284

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S +L+  GF N   +K    K N I     +++     P     V T +     Y
Sbjct: 285 ERFTESRALIEYGFNNFEKQKLKIDKNNKISVVKGKEDYVTVAPEKEVTVVTAKGSKSPY 344

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + + + +
Sbjct: 345 KISTEADKSLTEDGHLVAPIKKDAKVGSIVLE 376


>gi|323341544|ref|ZP_08081782.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus ruminis
           ATCC 25644]
 gi|323091028|gb|EFZ33662.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus ruminis
           ATCC 25644]
          Length = 448

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/355 (19%), Positives = 126/355 (35%), Gaps = 44/355 (12%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS- 83
              +     +D  TG ++     +     AS++KLMT Y+V   +K  K      I    
Sbjct: 50  NLDVKAAIAVDAKTGQILYAKNAEQALPVASMSKLMTVYLVLQAIKNGKLSWNQEILPDA 109

Query: 84  ---KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
              K + +   SN   K     T+    +  ++ SAN  A+A+A ++  T K F+  M  
Sbjct: 110 ASQKVSQDTQLSNVPLKADHKYTVKALYQATLIYSANGAAMALANAVGGTHKNFIDMMRK 169

Query: 141 TSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMH 186
            ++ +G++      A+G+                  +  +A+DMAI+S R+  D+P+ + 
Sbjct: 170 EARKMGINDAEIYTANGLTNDEVFDAKYPGASDNAENKFSAKDMAIISQRLIEDYPEVLE 229

Query: 187 YFQIKGLEIKG----KKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             +I  ++           N NW         + L  DG+KTG + ++G     +  +  
Sbjct: 230 TTKITRMKFNNGTDETTMENWNWMLPGLAKAYSELPVDGLKTGTSDSAGACFTGTVNKDG 289

Query: 237 QSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKK------INYIIKDFYQQNLS 286
             LI V+LGA   +     R   +  L+S  + N +           N      Y     
Sbjct: 290 HRLITVVLGAKHDSQEDLSRFVETQKLMSYCYNNYSYETIKAGKAFKNAASLPVYHGKDL 349

Query: 287 NEVPNISEEVCTTQKEII---NYNTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +         K  +   N   ++   K            +K   +     K
Sbjct: 350 KVAVSSKNGTDVWLKSSVSSANLVAKLSGDKKLYKDGGLVAPLKKGQTVGELSVK 404


>gi|219684372|ref|ZP_03539316.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia garinii PBr]
 gi|219672361|gb|EED29414.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia garinii PBr]
          Length = 392

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 78/321 (24%), Positives = 122/321 (38%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS  AS
Sbjct: 31  AKSIVLMDFDTKRILYSKNPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDAAS 90

Query: 88  EYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 91  YYNAPLNSSLMFLEKGQIVNFEEILKGLSVSSGNDASIAIAEFVVGDLNSFVNLMNINVL 150

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 151 NLGLLNMHFVEPSGYSN-ENKITALDMAFFVKSYIEKFKFMLNIHSLKYFVYPKSKNLGT 209

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                    K  N N  +  +  +DG+KTG+   SG N+VA+A +  + LIAV+LG    
Sbjct: 210 TLSSKFLNLKQKNANLLISDYPYSDGLKTGYIKESGLNLVATAQKYGRRLIAVVLGVEKG 269

Query: 250 NTRNKV------SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
             R         +  L   GF   +    I  + +  Y   +        E       + 
Sbjct: 270 INRFGEKMRALIAKDLFEYGFNEYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYVLTKD 329

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                ++    DK    +  +
Sbjct: 330 EFDKLKISYTVDKLVAPLSGD 350


>gi|228957844|ref|ZP_04119584.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801760|gb|EEM48637.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 363

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 80/308 (25%), Positives = 120/308 (38%), Gaps = 13/308 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++  +G V+       P   AS+TK+MTA +     K KK      +++S 
Sbjct: 18  NVSARNAVLMEQQSGRVLYGKAEHEPQKIASITKIMTALLAAESGKMKK-----MVSVSN 72

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     S    K G  + L++ +  L+++S ND A  IAES+  +   FV  MN  +K 
Sbjct: 73  EAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGNDAAQVIAESVGGSIDGFVYLMNQKAKE 132

Query: 145 LGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +G+  THF N HG+     HY++A DMA+L+     +   +   F  K  +     YP  
Sbjct: 133 IGMKDTHFSNPHGLDGDGSHYSSAYDMALLTKYAMGN-ETFKKIFGTKTYKSDSWDYPWK 191

Query: 204 NWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N        +  A G KTGFT  +G  +V +A +G   LI V L A           +L 
Sbjct: 192 NKHKLVTSYYEFATGGKTGFTKKAGRTLVTTASKGGLDLIVVTLSASSD---WDDHMNLF 248

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             GF      K +         +                  E    N  +K   DK    
Sbjct: 249 DKGFERFKQTKVLGQGAIAEINEKKYANHVYTKNSFSVPLTEEERKNVLLKVELDKSIKL 308

Query: 321 IDFEKITL 328
            D  K+  
Sbjct: 309 EDGVKVGK 316


>gi|89099074|ref|ZP_01171953.1| DacB [Bacillus sp. NRRL B-14911]
 gi|89086204|gb|EAR65326.1| DacB [Bacillus sp. NRRL B-14911]
          Length = 376

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 73/340 (21%), Positives = 130/340 (38%), Gaps = 17/340 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  IA  + +N+   +  A +       L++ +TG ++ E         AS+TK+MTA 
Sbjct: 2   LLSCIAAVLAANLPAKVQAAYSASSGSAILMEQSTGRILYEKDAYTKKRIASITKIMTAI 61

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     K     L T   +S+ A     S+   + G  + L++ +  L+++S ND AVAI
Sbjct: 62  LAIESGK-----LDTKAKVSEKAVRAEGSSIYLQPGEKILLEDLVYGLMLRSGNDSAVAI 116

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  + + FV  MN  ++ +G+  THF N HG+  H  + +      +  R   +   
Sbjct: 117 AEHVGGSLEGFVYLMNKKAEEIGMINTHFANPHGLDDHEEHYSTAYDMAVLTRYAMNNET 176

Query: 184 YMHYFQIKGLEIKGKK------YPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           Y      K              + N N      +    G KTG+T  +   +V +A +  
Sbjct: 177 YRKIAGTKMHRAPNPNESWDRVWKNKNRLLTEMYEYCTGGKTGYTKRAKRTLVTTASKDG 236

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
             LIAV L   D          +   GF   + +K +        +     +   +  + 
Sbjct: 237 LDLIAVTLNGPDD---WNDHIGMYESGFKEYSLKKVVEQGGIRELEDTAYEKKAFLKTDY 293

Query: 297 CTT--QKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                + E   +  + K  K   S   D +   ++   I 
Sbjct: 294 SYPASENEKDLFRVEYKMLKPSGSWKEDKDFPDVVGRAIV 333


>gi|228911227|ref|ZP_04075032.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
 gi|228848403|gb|EEM93252.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
          Length = 423

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 141/377 (37%), Gaps = 45/377 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN--------TGHVIAENYPDHPWN 52
           M++ L I+ + +LS     ++   T+       ++          TG ++ E  PD    
Sbjct: 1   MKKILSILLLFVLSISSLGVT---TSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLA 57

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS++KL+  Y V   +KE K    T + IS  A E   +N              +K L 
Sbjct: 58  IASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVKELY 117

Query: 113 VKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV---------- 158
                  A   + +L +    +EK F+   N  +K LGL    F+N+ G+          
Sbjct: 118 HSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNSTGLNNADLKGKHP 177

Query: 159 ----VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA--- 206
                   +  +ARDM IL+  I T +P+ +   + +         K  +  N NW    
Sbjct: 178 EGTDPTGENSMSARDMGILAKTIITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPG 237

Query: 207 -VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
              ++ G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF 
Sbjct: 238 AAFSYDGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFN 297

Query: 266 NKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----S 318
           N   +K            +           +E+    K+      ++    DK       
Sbjct: 298 NFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPYKIGTELDKSLAEDGH 357

Query: 319 HFIDFEKITLLKNKITK 335
                +K T + +   +
Sbjct: 358 LVAPVKKDTKVGSITLE 374


>gi|229142132|ref|ZP_04270657.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
 gi|228641421|gb|EEK97727.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
          Length = 425

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 83/374 (22%), Positives = 141/374 (37%), Gaps = 39/374 (10%)

Query: 1   MRQFLVIIAMAMLS--NIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++   I+ + +LS  ++    S AE     +     L D +TG ++ E  PD     AS
Sbjct: 3   MKKIFSILLVFLLSISSLVVTTSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLAIAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           ++KL+  Y V   +KE K    T + +S  A E   +N              ++ L    
Sbjct: 63  MSKLIVVYAVLEAIKEGKITWDTKVNVSDYAYEVSRNNEFSNVPFEKGRQYTVRELYHSI 122

Query: 116 ANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
               A   + +L +    +EK F+   N  +K LGL    F+NA G+             
Sbjct: 123 VIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHPEGT 182

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA----VG 208
                +  +ARDM ILS  + T +P+ +   + +         K  +  N NW       
Sbjct: 183 DPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPGAAF 242

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF N  
Sbjct: 243 AYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFNNFE 302

Query: 269 DRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----SHFI 321
            +K            Q           +E+    K+      ++    DK          
Sbjct: 303 KQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKIGTEVDKSLAEDGHLIA 362

Query: 322 DFEKITLLKNKITK 335
             +K   + +   +
Sbjct: 363 PIKKDAKVGSITLE 376


>gi|152974993|ref|YP_001374510.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023745|gb|ABS21515.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 373

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 78/336 (23%), Positives = 131/336 (38%), Gaps = 16/336 (4%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++    + ++ M M +      +           L++ ++G V+       P   AS+T
Sbjct: 1   MKRAWVIVALLIMCMHTMPNSTYAQMNNVSAHNAVLMEEHSGRVLYGKREHEPQKIASIT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA +     K K       ++IS  A     S    K G  + L++ +  L+++S N
Sbjct: 61  KIMTALLAAESGKMK-----EMVSISNKAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSGN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWR 176
           D A AIAE +  + + FV  MN  +K +G+  THF N HG+     HY++A DMA+L+  
Sbjct: 116 DAAQAIAEKVGGSIEGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGTHYSSAYDMALLTKY 175

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAI 233
              +   +   F  K  + +   YP  N        +  A G KTGFT  +G  +V +A 
Sbjct: 176 AMGN-ETFRKIFGTKTYQSESWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTAS 234

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +     I V L A            L   GF      K +        ++          
Sbjct: 235 KNGLDFIVVTLKASSD---WDDHMYLFDQGFKRYKLTKVLAQGAFPELKEKKYAHHVYTK 291

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                           ++   DK ++  D  K+  +
Sbjct: 292 NGFAVPLASDEKNKVLLRVELDKRANLKDGNKVGKI 327


>gi|320538339|ref|ZP_08038220.1| serine-type D-Ala-D-Ala carboxypeptidase [Treponema phagedenis
           F0421]
 gi|320144838|gb|EFW36573.1| serine-type D-Ala-D-Ala carboxypeptidase [Treponema phagedenis
           F0421]
          Length = 478

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A         + + +TG ++ E   D    PASLTKL+  YV    +   +  L   
Sbjct: 84  QNPAPILAAQSVIVANADTGQLLYEYQADRKIPPASLTKLVAMYVAMQAIDSGEITLDQV 143

Query: 80  ITISKNASEYPPSNS----TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +   + +                   +T+   L+ + V S ND A+A+A ++  +  KFV
Sbjct: 144 VVPPRESWAENIPPGSSLLFLGPNQQLTVSELLRGMAVVSGNDAAIALAHAVSGSVPKFV 203

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH-YFQIKGLE 194
           + M+   K LGL  T F    G+    +YTTARD A        ++P+ +  +  ++ L 
Sbjct: 204 ERMSQAVKTLGLKHTVFTEPSGL-SEENYTTARDFARFCLVYIREYPENLERFHALQELT 262

Query: 195 IK---------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                          P TN  +G   G DG+KTGF   SGFNI  +  +    ++AVILG
Sbjct: 263 YPLSHNVKNLISITQPATNTLLGKLKGCDGLKTGFIYESGFNIALTCKRAGTRILAVILG 322

Query: 246 ------ALDRNTRNKVSASLLSMGFYNKTDRKKI 273
                 A  R  R K    +++  F+N      I
Sbjct: 323 GAGKTIAQGRAIREKDGEKIMNWAFHNFQTYPLI 356


>gi|291542266|emb|CBL15376.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus bromii L2-63]
          Length = 374

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 69/342 (20%), Positives = 127/342 (37%), Gaps = 20/342 (5%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSI---AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ + + +   M   +    +      T     + L   +   VI     D    PAS 
Sbjct: 1   MKKIISLAVCFVMPFVLMGAKNAEDTPPTTSAQAFVLYCPDNNTVICSKNADERMKPAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MT+ +         + +T      K       S+   K G  + L +    +++ S 
Sbjct: 61  TKIMTSLITLEEAASCNSEVT-----FKQEMVAEGSSMYLKVGEKVRLSDLASGMMMASG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND A A A ++  + +KF Q MN  +K +G++ T+F+   G+    HY++A+DMA+L   
Sbjct: 116 NDAANAAAYTISGSSEKFSQRMNEKAKQIGMTNTNFVTPSGLDDDNHYSSAKDMALLMSY 175

Query: 177 IKTDFPQYMHYFQIK------GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
              +        +          + K   Y N N  +  +    G KTG+T  +G  +V+
Sbjct: 176 ALENDDFANLTAKKSVTVEFLEPKTKKTAYANHNRLLSLYPYCTGGKTGYTTVAGRCLVS 235

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR--KKINYIIKDFYQQNLSNE 288
           SA +   +L+ V L   +         SL    F        K  ++           + 
Sbjct: 236 SAKKDGVTLVCVTLNDRND---WNDHISLYDYAFEKYRGVDCKDADFCADIPCVGGDKDS 292

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           V    E+  T   +  + +   K+       +   EK   + 
Sbjct: 293 VTVTGEKNNTIVLKREDCDKIKKKIFIDSFLYAPIEKNESVG 334


>gi|253752532|ref|YP_003025673.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis SC84]
 gi|253754358|ref|YP_003027499.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis P1/7]
 gi|251816821|emb|CAZ52465.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus suis
           SC84]
 gi|251820604|emb|CAR47361.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus suis
           P1/7]
 gi|319758942|gb|ADV70884.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis JS14]
          Length = 413

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 137/356 (38%), Gaps = 31/356 (8%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+     P L+   +    +   ++ ++G ++ E   +   + AS++K ++ Y+V+  L 
Sbjct: 13  AVFLTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISKTLSIYLVYEALA 72

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
           + +  L T + IS            ++      + ++ + L   ++ S+N   +A+AE +
Sbjct: 73  KGEITLDTMVDISDYPYSLTSNTELSNVNLDERSYSVRDLLNASLITSSNSAIIALAEKI 132

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAIL 173
             +E  FV  M    +  G++ T  +N  G+                  +  +A D+AI+
Sbjct: 133 AGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPGSSPEDVNMFSALDVAII 192

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIV 229
           + R+  D+PQ +    +   +  G  Y +TN  +        G DG+KTG + ++G + +
Sbjct: 193 ARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFL 252

Query: 230 ASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------D 279
           A+  Q    +I V+L A         R   +  L++  + N +    +            
Sbjct: 253 ATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLVKKSEAFGDSKIK 312

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +           + ++   Q+   +         D +      +  TL+     K
Sbjct: 313 VFNGEKETSPVVAAADLTVVQRNQTDNVPTATFTTDIKEIDAPLKAGTLVSKLQLK 368


>gi|213162143|ref|ZP_03347853.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 247

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 7/232 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A           S    K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIV 229
            D P      + K       + PN N     T L  DGMKTG T  +G+N+V
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGAGYNLV 247


>gi|228988616|ref|ZP_04148702.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771067|gb|EEM19547.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 423

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 138/377 (36%), Gaps = 45/377 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN--------TGHVIAENYPDHPWN 52
           M++ L I+   +LS     ++   T+       ++          TG ++ E  PD    
Sbjct: 1   MKKILSILLAFLLSISSLGVT---TSHAEEKIHIEAAAALLFDADTGKILHEQNPDELLA 57

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS++KL+  Y V   +KE K    T + IS  A E   +N              ++ L 
Sbjct: 58  IASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSNVPFEKGRQYTVRELY 117

Query: 113 VKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGV---------- 158
                  A   + +L +    +EK F+   N  +K LGL    F+NA G+          
Sbjct: 118 HSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFVNATGLNNADLKGKHP 177

Query: 159 ----VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA--- 206
                   +  +ARDM ILS  + T +P+ +   + +         K  +  N NW    
Sbjct: 178 EGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNHPKPIRMENWNWMLPG 237

Query: 207 -VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               + G DG+KTG +  +G+    +A +GD  LI+VI+     + R   S  L+  GF 
Sbjct: 238 AAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMDERFTESRELIEYGFN 297

Query: 266 NKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE-----S 318
           N   +K            Q           +E+    K+      ++    DK       
Sbjct: 298 NFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPYKIGTEVDKSLAEDGH 357

Query: 319 HFIDFEKITLLKNKITK 335
                +K   + +   +
Sbjct: 358 LVAPIKKDAKVGSITLE 374


>gi|116514484|ref|YP_813390.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|116093799|gb|ABJ58952.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|325126190|gb|ADY85520.1| D-alanyl-d-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 428

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 127/339 (37%), Gaps = 34/339 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--- 81
              +     +D ++G ++       P   AS+TKL+T Y+    +K+ K   T+      
Sbjct: 43  NLDVKAAIAVDADSGQILYAKNATTPRQIASMTKLVTVYLTLQAIKQGKLSWTSTAKPTA 102

Query: 82  -ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I+K +     SN     G   T+    +  +++SAN  A+ +A+++   +  F++ M  
Sbjct: 103 AIAKISQNTEYSNVPLTSGHAYTIKELYRATLIESANGAALTLAQAVSGDQVTFIKKMRK 162

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              + G+      NA G+                  +  +A DMAI+  ++  DFP+ + 
Sbjct: 163 LLTSWGIKDAKIYNACGLANGSLGSAAYPGVGKDVENEMSATDMAIVCQKLLKDFPEVLQ 222

Query: 187 YFQIKGLEI----KGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              I            +  N NW         + L  DG+KTG T  +G     +  +  
Sbjct: 223 TTSITSATFSSGSTQSQMTNWNWMLKGLSSYYSDLPVDGLKTGTTDKAGACFAGTVKKNG 282

Query: 237 QSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             +I V+LGA   N    +R   +A L+   + N T                   E    
Sbjct: 283 HRIITVVLGAKHANSQDPSRFVQTAKLMHYVYQNYTAVTLKKGSSISGANTVKVPEGKET 342

Query: 293 SEEVCTTQKEIINYN--TQMKEAKDKESHFIDFEKITLL 329
           S +V   +   I     ++++ +  K +     +K + +
Sbjct: 343 SSKVVLGKTVTIWAKQGSKLQTSLSKTAVSAPVKKGSKV 381


>gi|210614210|ref|ZP_03290105.1| hypothetical protein CLONEX_02318 [Clostridium nexile DSM 1787]
 gi|210150787|gb|EEA81795.1| hypothetical protein CLONEX_02318 [Clostridium nexile DSM 1787]
          Length = 469

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 67/338 (19%), Positives = 133/338 (39%), Gaps = 18/338 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN      +          ++D ++G ++     D    PAS+TK++TA V     +   
Sbjct: 56  SNALAGWPVGPNIYSESGIVMDMDSGAILYAKKIDDQHYPASITKILTAVVALENSQLTD 115

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
            +  T   I  +  EY  ++   K G  +++++AL  +++ SAN+++ AIA S+      
Sbjct: 116 RVKFTQNCI--DFLEYGDAHIGMKVGEEISMEDALYGMLLASANEVSYAIANSVNGGYDN 173

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F+  MN     LG + +HF+NA+G+    HYT+A DMA++       + ++      +  
Sbjct: 174 FINMMNEKVAELGGTNSHFVNANGLHNDEHYTSAHDMALIGA-AAFKYEEFRKITGTRQY 232

Query: 194 EIKGKKYPNTNWAVG------------TFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
            I      + +                 +    G KTG+T  +   +V  A + D++L+A
Sbjct: 233 TIGPTALTSESRTFQQNHKMLFQGNRNYYEYCVGGKTGYTDQALTTLVTFATKDDKNLVA 292

Query: 242 VILGAL-DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           V L            + ++L   F N +        + D   +++      +     T  
Sbjct: 293 VTLRVHGGGQNAYVDTRAMLDYAFDNFSKVPVTKEQVTDKNIKSVDENAYVMLPSGVTFD 352

Query: 301 KEIINYNTQMKEAKDKES--HFIDFEKITLLKNKITKK 336
           K         +      +  +    +++  +   IT K
Sbjct: 353 KLDATLQEPTELGDKSGTLIYTYQGQEVGKVPVTITDK 390


>gi|104774384|ref|YP_619364.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|103423465|emb|CAI98355.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 428

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 127/339 (37%), Gaps = 34/339 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--- 81
              +     +D ++G ++       P   AS+TKL+T Y+    +K+ K   T+      
Sbjct: 43  NLDVKAAIAVDADSGQILYAKNATTPRQIASMTKLVTVYLTLQAIKQGKLSWTSTAKPTA 102

Query: 82  -ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I+K +     SN     G   T+    +  +++SAN  A+ +A+++   +  F++ M  
Sbjct: 103 AIAKISQNTEYSNVPLTSGHAYTIKELYRATLIESANGAALTLAQAVSGDQVTFIKKMRK 162

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              + G+      NA G+                  +  +A DMAI+  ++  DFP+ + 
Sbjct: 163 LLTSWGIKDAKIYNACGLANGSLGSAAYPGVGKDVENEMSATDMAIVCQKLLKDFPEVLQ 222

Query: 187 YFQIKGLEI----KGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              I            +  N NW         + L  DG+KTG T  +G     +  +  
Sbjct: 223 TTSITSATFSSGSTQSQMTNWNWMLKGLSSYYSDLPVDGLKTGTTDKAGACFAGTVKKNG 282

Query: 237 QSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             +I V+LGA   N    +R   +A L+   + N T                   E    
Sbjct: 283 HRIITVVLGAKHANSQDPSRFVQTAKLMHYVYQNYTAITLKKGSSISGANTVKVPEGKET 342

Query: 293 SEEVCTTQKEIINYN--TQMKEAKDKESHFIDFEKITLL 329
           S +V   +   I     ++++ +  K +     +K + +
Sbjct: 343 SSKVVLGKTVTIWAKQGSKLQTSLSKTAVSAPVKKGSKV 381


>gi|239625589|ref|ZP_04668620.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519819|gb|EEQ59685.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 391

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 21/256 (8%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     LLD  TG+V+     D  + PAS+TKLMTA +V          L   +T S
Sbjct: 9   PAIEAEGAALLDAATGNVLFSKNGDTKFYPASITKLMTALLVAENC-----NLDDKVTFS 63

Query: 84  KNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             A+        +     G  MT+   L  L++KSAN++  A+AE +  +  KF + MN 
Sbjct: 64  STATTNLESGAVSINMTAGDVMTVRQCLYALLLKSANEVGNALAEHVAGSNAKFAEMMNA 123

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL------- 193
            +  LG + THF N HG+    HYTT RDMA+++     +                    
Sbjct: 124 KAAALGCTNTHFTNPHGLNDTNHYTTPRDMALIARAAFQNDTVKTVASTRTYTLPPTIKN 183

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                +              + G  G KTG+T  +G  +V +  +    LIAV++    +
Sbjct: 184 PSGLTVTMGHKMLNPSDSRYYPGVIGGKTGYTSKAGNTLVTAVEKDGVRLIAVVM--KSK 241

Query: 250 NTRNKVSASLLSMGFY 265
           +T    + ++   GF 
Sbjct: 242 STHYTDTKAMFDYGFE 257


>gi|15674465|ref|NP_268639.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes M1 GAS]
 gi|13621563|gb|AAK33360.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
           [Streptococcus pyogenes M1 GAS]
          Length = 410

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 142/364 (39%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K  Y  +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLYVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|56807642|ref|ZP_00365536.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes M49 591]
          Length = 410

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 142/364 (39%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+A+++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAVIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K  Y  +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLYVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|253756292|ref|YP_003029432.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis BM407]
 gi|251818756|emb|CAZ56593.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus suis
           BM407]
          Length = 413

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 137/356 (38%), Gaps = 31/356 (8%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+     P L+   +    +   ++ ++G ++ E   +   + AS++K ++ Y+V+  L 
Sbjct: 13  AVFLTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISKTLSIYLVYEALA 72

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
           + +  L T + IS            ++      + ++ + L   ++ S+N   +A+AE +
Sbjct: 73  KGEITLDTMVDISDYPYSLTSNTELSNVNLDERSYSVRDLLNASLITSSNSAIIALAEKI 132

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAIL 173
             +E  FV  M    +  G++ T  +N  G+                  +  +A D+AI+
Sbjct: 133 AGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPSSSPEDVNMFSALDVAII 192

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIV 229
           + R+  D+PQ +    +   +  G  Y +TN  +        G DG+KTG + ++G + +
Sbjct: 193 ARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFL 252

Query: 230 ASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------D 279
           A+  Q    +I V+L A         R   +  L++  + N +    +            
Sbjct: 253 ATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLVKKSEAFGDSKIK 312

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +           + ++   Q+   +         D +      +  TL+     K
Sbjct: 313 VFNGEKETSPVVAAADLTVVQRNQTDNVPTATFTTDIKEIDAPLKAGTLVSKLQLK 368


>gi|254472024|ref|ZP_05085425.1| D-alanyl-D-alanine carboxypeptidase protein [Pseudovibrio sp.
           JE062]
 gi|211959226|gb|EEA94425.1| D-alanyl-D-alanine carboxypeptidase protein [Pseudovibrio sp.
           JE062]
          Length = 352

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 99/251 (39%), Positives = 142/251 (56%), Gaps = 1/251 (0%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
            A+   +  + S+A  +  P   LL+ +T  V+       PW PAS TKLMTA V F  L
Sbjct: 13  AALGLILISYGSLAPASATPS-LLLNLDTQSVLYAEDAGDPWYPASTTKLMTALVTFEAL 71

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             ++    T + +S  A       S  K GS MTL +A+  ++V SAND+AVA+AES+  
Sbjct: 72  ANREIDHETSVVMSPWAMRQASLKSGLKVGSVMTLQDAIYAVLVGSANDVAVALAESVAG 131

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +E+ FVQ MN T++ LG++A+HF NA+G+      T+ARD+A+L+  I   +PQY   F 
Sbjct: 132 SEEAFVQRMNATARRLGMTASHFANANGLFDATQQTSARDLAVLAREIYLGYPQYHDVFA 191

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
              + I GK   + N  +    G  GMKTGF C+SG NIVA   +G Q  +AV+LGA   
Sbjct: 192 TSKVTIDGKAITSFNELLTRLPGTVGMKTGFVCSSGRNIVALTDRGGQRYMAVVLGATTG 251

Query: 250 NTRNKVSASLL 260
             R++ +A LL
Sbjct: 252 RERSERAAKLL 262


>gi|71910062|ref|YP_281612.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS5005]
 gi|71852844|gb|AAZ50867.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS5005]
          Length = 410

 Score =  143 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 142/364 (39%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K  Y  +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLYVLDSPKKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|313893802|ref|ZP_07827368.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella sp. oral
           taxon 158 str. F0412]
 gi|313441366|gb|EFR59792.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella sp. oral
           taxon 158 str. F0412]
          Length = 268

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 13/268 (4%)

Query: 5   LVIIAMAMLSNIFPFLS--IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +  I   +L +   + +     +       L+D +T  ++    PD   +PAS TK++T 
Sbjct: 2   IAFIGATLLGSSISYAAYIAPPSTVGEAVVLIDADTKEILFAKNPDKWMHPASTTKMVTL 61

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
                    K   L    TIS  A+    SN   + G  +TL+  L+ ++V S ND AV 
Sbjct: 62  LTALEL---KGTQLDELATISSYATSMEESNLGVRVGDQITLEAVLEGMMVASGNDAAVV 118

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIK 178
           +AE++  + +KF + M   +   G   + F+N HG+ Q GH++TARD+A++         
Sbjct: 119 VAENVSGSVEKFGKDMTRIAAKAGAKNSVFLNPHGLTQMGHHSTARDLAMIAAYGMKYQM 178

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                   Y+++            TN  +   + GA+G+KTGFT A+G  ++ASA +   
Sbjct: 179 FRDKVANDYYKVPYQNRAPVTIRTTNHFIRNKYPGANGLKTGFTNAAGECLIASATRNGH 238

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFY 265
           ++I V+L     + R + +   L  GF 
Sbjct: 239 TMIVVMLN---DDNRWEEAVQFLDYGFK 263


>gi|90961063|ref|YP_534979.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           salivarius UCC118]
 gi|90820257|gb|ABD98896.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           salivarius UCC118]
          Length = 418

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 148/359 (41%), Gaps = 32/359 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            +++  +  LS I    ++ +   +      +D  TG +I        +  AS++KL+TA
Sbjct: 16  LIIVTGVGQLSLIKADQTLPQLDLEAKSAIAIDAKTGQIIYAKDDKQTYPVASMSKLLTA 75

Query: 63  YVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           Y++   + + +    T +T +      ++    +N   ++G + T+    + ++V SAN 
Sbjct: 76  YILLQAIHKGEVTWETKVTPTATEVDISNNTELTNVPLQEGHSYTIRQLYQAMLVGSANA 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHY 164
             + I  ++  T+ KF+  M  T+K+LG++     +A+G+                  + 
Sbjct: 136 ATMLIGNAISGTQTKFIDKMRETAKSLGITDAKIYSANGLTAKYLGDEIYPNTDENAENE 195

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----KYPNTNWAVGTFLG--ADGMKT 218
            + RDMAI+S ++  ++P+ +   ++  ++           NTN  +        DG+KT
Sbjct: 196 FSVRDMAIISQKLIKEYPEILETTKLTKIDFNDNGEITTVNNTNELLQDDSNLEIDGLKT 255

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK------TDRKK 272
           G + A+G+   ++  +    +I VI GA D + R   + +LL+  + N       T++  
Sbjct: 256 GTSDAAGYCFASTTNKDGHRIITVIAGAKDNDARFDQTKNLLNYIYNNYDYLAISTNQAL 315

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                  + +Q+  + +      +   +             K   +     ++   + +
Sbjct: 316 RQDAKVKYGKQSSVSAIIGNDLSLWVPKNTREKALQIKLTPKS-STIEAPIKQGETVGD 373


>gi|300812512|ref|ZP_07092935.1| beta-lactamase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496511|gb|EFK31610.1| beta-lactamase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 428

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 127/339 (37%), Gaps = 34/339 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--- 81
              +     +D ++G ++       P   AS+TKL+T Y+    +K+ K   T+      
Sbjct: 43  NLDVKAAIAVDADSGQILYAKNATTPRQIASMTKLVTVYLTLQAIKQGKLSWTSTAKPTA 102

Query: 82  -ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I+K +     SN     G   T+    +  +++SAN  A+ +A+++   +  FV+ M  
Sbjct: 103 AIAKISQNTEYSNVPLTSGHAYTIKELYRATLIESANGAALTLAQAVSGDQVTFVKKMRE 162

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              + G+      NA G+                  +  +A DMAI+  ++  DFP+ + 
Sbjct: 163 LLTSWGIKDAKIYNACGLANGSLGSAAYPGVGKDVENEMSATDMAIVCQKLLKDFPEVLQ 222

Query: 187 YFQIKGLEI----KGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              I            +  N NW         + L  DG+KTG T  +G     +  +  
Sbjct: 223 TTSITSATFSSGSTQSQMTNWNWMLKGLSSYYSDLPVDGLKTGTTDKAGACFAGTVKKNG 282

Query: 237 QSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             +I V+LGA   N    +R   +A L+   + N T                   E    
Sbjct: 283 HRIITVVLGAKHANSQDPSRFVQTAKLMHYVYQNYTAVTLKKGSSISGANTVKVPEGKET 342

Query: 293 SEEVCTTQKEIINYN--TQMKEAKDKESHFIDFEKITLL 329
           S +V   +   I     ++++ +  K +     +K + +
Sbjct: 343 SSKVVLGKTVTIWAKQGSKLQTSLSKTAVSAPVKKGSKM 381


>gi|313124231|ref|YP_004034490.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280794|gb|ADQ61513.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 428

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 126/339 (37%), Gaps = 34/339 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--- 81
              +     +D ++G ++       P   AS+TKL+T Y+    +K+ K   T+      
Sbjct: 43  NLDVKAAIAVDADSGQILYAKNATTPRQIASMTKLVTVYLTLQAIKQGKLSWTSTAKPTA 102

Query: 82  -ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I+K +     SN         T+    +  +++SAN  A+ +A+++   +  FV+ M  
Sbjct: 103 AIAKISQNTEYSNVPLTSSHAYTIKELYRATLIESANGAAMTLAQAVSGDQVTFVKKMRK 162

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              + G+      NA G+                  +  +A DMAI+  ++  DFP+ + 
Sbjct: 163 LLTSWGIKDAKIYNACGLANGNLGSAAYPGVGKDVENEMSATDMAIVCQKLLKDFPEVLQ 222

Query: 187 YFQIKGLEI----KGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              I            +  N NW         + L  DG+KTG T  +G     +  +  
Sbjct: 223 TTSITSATFSSGSTQSQMTNWNWMLKGLSSYYSDLPVDGLKTGTTDKAGACFAGTVKKNG 282

Query: 237 QSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             +I V+LGA   N    +R   +A L+   + N T                   E    
Sbjct: 283 HRIITVVLGAKHANSQDPSRFVQTAKLMHYVYQNYTAVTLKKGSSISGANTVKVPEGKET 342

Query: 293 SEEVCTTQKEIINYN--TQMKEAKDKESHFIDFEKITLL 329
           S +V   +   I     ++++ +  K +     +K + +
Sbjct: 343 SSKVVLDKTVTIWAKQGSKLQTSLSKTTVSAPVKKGSKV 381


>gi|120402569|ref|YP_952398.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119955387|gb|ABM12392.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 403

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 103/283 (36%), Gaps = 13/283 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G VIA   P     PAS+ K++TA          
Sbjct: 80  VITAPGTPPVPADVSAEAWLVADLDSGDVIAARDPHGRHRPASIIKVLTAMQAI-----N 134

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   I  ++  +    +      G   ++++ L  L++ S ND A A+A  +   + 
Sbjct: 135 DLPLHKVIPGTEEDAAQEGTKVGVGPGGFYSINDLLHGLLMYSGNDAAHALAMQMGGMQT 194

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
              + +N  +  LG   T      G+   G  T+A D+ +         P +      + 
Sbjct: 195 ALNK-INALAGKLGARDTRVATPSGLDGPGMSTSAYDIGLFYRY-AWQNPVFTDIVATRS 252

Query: 193 LEIK-----GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                    G    N N  +  + GA G KTGFT  +G   V +A +  + L+AV+L G 
Sbjct: 253 SNFPGRDGAGYPIENDNKLLANYPGALGGKTGFTDDAGQTFVGAATRDGRRLVAVLLRGT 312

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
                  + +A LL  GF      K  + I  D        + 
Sbjct: 313 RQPIAPWEQAARLLDYGFATAPGTKVGSLIEPDPSLGVTRADP 355


>gi|229136205|ref|ZP_04264956.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228647258|gb|EEL03342.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
          Length = 425

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 81/332 (24%), Positives = 130/332 (39%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T +TIS  A E   +N    
Sbjct: 45  TGKILHEQNPDELLAIASMSKLIVIYAVLEAIKEGKITWDTKVTISDYAYEVSRNNEFSN 104

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 105 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 164

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 165 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKIIITKYPEMLEDTKQRFRNFPDNH 224

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + GADG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 225 PKPIRMENWNWMLPGAAFAYEGADGLKTGSSDTAGYGFTITATRGDLRLISVIIKTKSMD 284

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S +L+  GF N   +K    K N I     +++     P     V T +     Y
Sbjct: 285 ERFTESRALIEYGFNNFEKQKLKIDKNNKISVVKGKEDYVTVAPEKEVTVVTAKGSKSPY 344

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + + + +
Sbjct: 345 KISTEADKSLAEDGHLVAPIKKDAKVGSIVLE 376


>gi|300214001|gb|ADJ78417.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           salivarius CECT 5713]
          Length = 385

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 139/337 (41%), Gaps = 31/337 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS- 83
             +      +D  TG +I        +  AS++KL+TAY++   + + +    T +T + 
Sbjct: 5   DLEAKSAIAVDAKTGQIIYAKDDKQTYPVASMSKLLTAYILLQAIHKGEVTWETKVTPTA 64

Query: 84  ---KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                ++    +N   ++G + T+    + ++V SAN   + I  ++  T+ KF+  M  
Sbjct: 65  TEVDISNNTELTNVPLQEGHSYTIRQLYQAMLVGSANAATMLIGNAISGTQTKFIDKMRE 124

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
           T+K+LG++     +A+G+                  +  + RDMAI+S ++  ++P+ + 
Sbjct: 125 TAKSLGITDAKIYSANGLTAKYLGDEIYPNTDENAENEFSVRDMAIISQKLIEEYPEILE 184

Query: 187 YFQIKGLEIKGK----KYPNTNWAVGTFLG--ADGMKTGFTCASGFNIVASAIQGDQSLI 240
             ++  ++           NTN  +        DG+KTG + A+G+   ++  +    +I
Sbjct: 185 TTKLTKIDFNDNGEITTVNNTNELLQDDSNLEVDGLKTGTSDAAGYCFASTTNKDGHRII 244

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNK------TDRKKINYIIKDFYQQNLSNEVPNISE 294
            VI GA D + R   + +LL+  + N       T++     +   + +Q+  + +     
Sbjct: 245 TVIAGAKDNDARFDQTKNLLNYIYNNYDYLAISTNQALRQDVKVKYGKQSSVSTIIGNDL 304

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
            +   +             K   +     ++   + +
Sbjct: 305 SLWVPKNTREKALQIKLTPKS-STIEAPIKQGETVGD 340


>gi|269797345|ref|YP_003311245.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Veillonella
           parvula DSM 2008]
 gi|269093974|gb|ACZ23965.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Veillonella
           parvula DSM 2008]
          Length = 285

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 16/274 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           ++ ++ I    +  I   ++        +       L+D +T  ++    PD   +PAS 
Sbjct: 13  KKLVLAITFIGIVFIGAGVAQAAYITPPSTIGEAVVLIDADTKEILFAKNPDKWMHPAST 72

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK++T          K   L    TIS  A+    SN   + G  +TL+  L+ ++V S 
Sbjct: 73  TKMVTLLTALEL---KGTQLDELATISSYATSMEESNLGVRVGDQITLEGVLEGMMVASG 129

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL--- 173
           ND AV +AE++  +  KF + M   +   G   + F+N HG+ Q GH++TARD+A++   
Sbjct: 130 NDAAVVVAENVSGSVDKFAKDMTRIAAKAGAKNSVFLNPHGLTQKGHHSTARDLAMIAAY 189

Query: 174 -SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVAS 231
                         Y+++       +    TN  +   + GA+G+KTGFT A+G  ++AS
Sbjct: 190 GMKYQMFRDKVANDYYKVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIAS 249

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +   ++I V+L     + R + +   L  GF 
Sbjct: 250 ATRKGHTMIVVMLN---DDNRWEEAVQFLDYGFK 280


>gi|146321721|ref|YP_001201432.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis 98HAH33]
 gi|145692527|gb|ABP93032.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis 98HAH33]
 gi|292559140|gb|ADE32141.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus suis GZ1]
          Length = 415

 Score =  142 bits (358), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 137/356 (38%), Gaps = 31/356 (8%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+     P L+   +    +   ++ ++G ++ E   +   + AS++K ++ Y+V+  L 
Sbjct: 15  AVFLTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISKTLSIYLVYEALA 74

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
           + +  L T + IS            ++      + ++ + L   ++ S+N   +A+AE +
Sbjct: 75  KGEITLDTMVDISDYPYSLTSNTELSNVNLDERSYSVRDLLNASLITSSNSAIIALAEKI 134

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAIL 173
             +E  FV  M    +  G++ T  +N  G+                  +  +A D+AI+
Sbjct: 135 AGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPGSSPEDVNMFSALDVAII 194

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIV 229
           + R+  D+PQ +    +   +  G  Y +TN  +        G DG+KTG + ++G + +
Sbjct: 195 ARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFL 254

Query: 230 ASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------D 279
           A+  Q    +I V+L A         R   +  L++  + N +    +            
Sbjct: 255 ATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLVKKSEAFGDSKIK 314

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +           + ++   Q+   +         D +      +  TL+     K
Sbjct: 315 VFNGEKETSPVVAAADLTVVQRNQTDNVPTATFTTDIKEIDAPLKAGTLVSKLQLK 370


>gi|269925806|ref|YP_003322429.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269789466|gb|ACZ41607.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 334

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 71/303 (23%), Positives = 120/303 (39%), Gaps = 36/303 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIA-----------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           FL++IA  ++       ++                     ++D  TG ++    P+    
Sbjct: 21  FLLLIAGIIVPISTANAALPASNAVVLPYPEPEITAKSALVMDRRTGKILWAYKPNKKLA 80

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS  K+MTA +   +           I +         S +  + G  +TL + LK  +
Sbjct: 81  MASTAKMMTAILALQYAD-----PNEVIKVYPR-DLVGGSTAYLRAGEKLTLTDLLKAAL 134

Query: 113 VKSANDIAVAIAESLCKTE---------KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           + S ND AV IA+ + +           + FV  MN  +  LGL  T F   +G    G 
Sbjct: 135 IPSGNDAAVTIADYVGRKYLGGVGDNGIQVFVDEMNAKAHELGLDHTVFRTPNGFDAPGQ 194

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-------KKYPNTNWAVGTFLGADGM 216
           Y+TA D+A L   +  +          +   I             +TN  +  + G  G+
Sbjct: 195 YSTALDLAKLGRELLDNPLLSSIVGTYRTRVIGHLGGKPVYHTLVSTNDLLPIYPGMQGI 254

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTG T A+G N+V+   +G+  LIAV+LG+ D   R   + ++L   F + +  + I  I
Sbjct: 255 KTGTTPAAGENLVSYVKRGNIELIAVVLGSQD---RFADTRAILDWMFSSYSLAESILPI 311

Query: 277 IKD 279
              
Sbjct: 312 TSP 314


>gi|291547442|emb|CBL20550.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. SR1/5]
          Length = 429

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                 +     L+D NT  V+     D    PAS+TK++T  +             T I
Sbjct: 78  PKGPGIEAQAAVLMDVNTEAVLYSKNADTQLYPASITKILTTLLACEN-----LNAKTNI 132

Query: 81  TISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           T+S+    +     S+     G   T D AL  ++++SAN+++VAIAE +  + KKF + 
Sbjct: 133 TVSEKASTSVTAGDSSIYAAPGEKFTRDQALMAVMLQSANEMSVAIAEEVSGSVKKFAEL 192

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------FPQYMHYFQIK 191
           MN  +K  G   THF N +G+    HYTTA DMA ++     +        +  +     
Sbjct: 193 MNWRAKLFGCKNTHFNNPNGLPDENHYTTASDMAKIAKSAWLNPLFRRYCTKRYYEIPPT 252

Query: 192 GLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
               + ++  N +  +      + G  G KTG+T ASG  +V    +G+ +L+AVIL + 
Sbjct: 253 NKFAEARQLLNHHKMMKNGEYYYEGVRGGKTGYTDASGNTLVTYCKRGNITLVAVILNST 312

Query: 248 DRNTRNKVSASLLSMGFYNKTDR 270
                   +ASL + GF N    
Sbjct: 313 SAANAYSDTASLFNYGFENFEKV 335


>gi|229170094|ref|ZP_04297784.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228613378|gb|EEK70513.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
          Length = 425

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T +TIS  A E   +N    
Sbjct: 45  TGKILHEQNPDELLAIASMSKLIVIYAVLEAIKEGKITWDTKVTISDYAYEVSRNNEFSN 104

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 105 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 164

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 165 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNH 224

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ GADG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 225 PKPIRMENWNWMLPGAAFSYEGADGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 284

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S +L+  GF N   +K    K N I     +++     P     V T +     Y
Sbjct: 285 ERFTESRALIEYGFNNFEKQKLKVDKNNKISVVKGKEDYVTVAPEKEVTVVTAKGNKAPY 344

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + + + +
Sbjct: 345 KISAEADKSLAEDGHLVAPIKKDAKVGSIVLE 376


>gi|226325575|ref|ZP_03801093.1| hypothetical protein COPCOM_03380 [Coprococcus comes ATCC 27758]
 gi|225206058|gb|EEG88412.1| hypothetical protein COPCOM_03380 [Coprococcus comes ATCC 27758]
          Length = 472

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 22/301 (7%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + SN                 +++  +G ++     D    PAS+TK++TA V       
Sbjct: 62  IASNELENWPEGPATYGEAGIVMEAKSGAILYAKNIDGKAYPASITKILTALVALEN--- 118

Query: 72  KKAMLTTPITI---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
               L   ITI   S +      +      G  ++L++AL  L++ SAN++A AIAE++ 
Sbjct: 119 --GNLDDKITITQNSVDCVAEGDAYIGMIAGEEISLNDALHALLMASANEVAYAIAENVG 176

Query: 129 K-TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
                 FV  MN  +K LG   + F N +G+    HYTTARDMA+++  +  +  ++   
Sbjct: 177 GLGYDGFVAKMNERAKELGAVNSDFENPNGLNAQNHYTTARDMALITQELLENHEEFKTI 236

Query: 188 FQIKGLEIKGKKYPNTNWAV------------GTFLGADGMKTGFTCASGFNIVASAIQG 235
            Q +   I      N                   +      KTG+T  +   +V+ A   
Sbjct: 237 AQTQQYTIGATNLVNQARTFQQSDMMFYEGNDYYYPKTIAGKTGYTDEALNTLVSCAADD 296

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           +  LI+V+L    +N     S +LL  GF N       +Y     +++   N    + E 
Sbjct: 297 NLELISVVLKTHGKNV-YPDSINLLEYGFNNFAKYTIADYEDSADFKEIDPNAYVVLPEN 355

Query: 296 V 296
           V
Sbjct: 356 V 356


>gi|213857663|ref|ZP_03384634.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 266

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 14/252 (5%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDM
Sbjct: 135 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDM 194

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+V
Sbjct: 195 ALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLV 254

Query: 230 ASAIQGDQSLIA 241
           ASA +G   LI+
Sbjct: 255 ASATEGQMRLIS 266


>gi|19745420|ref|NP_606556.1| penicillin-binding protein [Streptococcus pyogenes MGAS8232]
 gi|139473105|ref|YP_001127820.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes str.
           Manfredo]
 gi|19747531|gb|AAL97055.1| putative penicillin-binding protein [Streptococcus pyogenes
           MGAS8232]
 gi|134271351|emb|CAM29569.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes str. Manfredo]
          Length = 410

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFDGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|325685760|gb|EGD27835.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 428

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 127/339 (37%), Gaps = 34/339 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--- 81
              +     +D ++G ++       P   AS+TKL+T Y+    +K+ K   T+      
Sbjct: 43  NLDVKAAIAVDADSGQILYAKNATTPRQIASMTKLVTVYLTLQAIKQGKLSWTSTSKPTA 102

Query: 82  -ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I+K +     SN         T+ +  +  +++SAN  A+ +A+++   +  FV+ M  
Sbjct: 103 AIAKISQNTEYSNVPLTSSRAYTIKDLYRATLIESANGAAMTLAQAVSGDQVTFVKKMRK 162

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              + G+      NA G+                  +  +A DMAI+  ++  DFP+ + 
Sbjct: 163 LLTSWGIKDAKIYNACGLANGNLGSAAYPGVGKDVENEMSATDMAIVCQKLLKDFPEVLQ 222

Query: 187 YFQIKGLEI----KGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              I            +  N NW         + L  DG+KTG T  +G     +  +  
Sbjct: 223 TTSITSATFSSGSTQSQMTNWNWMLKGLSSYYSDLPVDGLKTGTTDKAGACFAGTVKKNG 282

Query: 237 QSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             +I V+LGA   N    +R   +A L+   + N T                   E    
Sbjct: 283 HRIITVVLGAKHANSQDPSRFVQTAKLMHYVYQNYTAVTLKKGSSISGANTVKVPEGKET 342

Query: 293 SEEVCTTQKEIINYN--TQMKEAKDKESHFIDFEKITLL 329
           S +V   +   I     ++++ +  K +     +K + +
Sbjct: 343 SSKVVLDKTVTIWAKQGSKLQTSLSKTTVSAPVKKGSKV 381


>gi|254504922|ref|ZP_05117073.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
 gi|222440993|gb|EEE47672.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
          Length = 374

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 122/332 (36%), Gaps = 12/332 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           M +   I    +   T K P   L +  +G V+     D P+ P +L K+MTA  VF  L
Sbjct: 1   MLLAFAIVGVQAEQLTTKAPKALLYEPASGTVLFAKDADVPFAPGALVKVMTAATVFKAL 60

Query: 70  KEKKAMLTTPITISKNASEY------PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
            + +       T+S++A           +       S +++++ LK L+V + ND A+ +
Sbjct: 61  SDGELTQDQLCTVSEHAWRTGGAPSGRGATMFAAIKSEISVEDLLKGLLVHNGNDSAIIL 120

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE L  +E  F   MN  +  +G++ ++F N  G  +    TT RD   L   +  +  +
Sbjct: 121 AECLDGSETAFADRMNALAAEIGMANSNFGNPTGYEEAVSTTTVRDQVRLGEYLVEEHTE 180

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               F I           N N  +G     DG+  G     G++ + S  +  + +IA +
Sbjct: 181 RYSMFAIPEFTWNNIFQRNKNPLLGEIRNLDGLGGGAHSEDGYSGLGSIDRNGRRIIAAV 240

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPNISE---EVC 297
            G    N R      +    +     +                 +   VP ISE   +V 
Sbjct: 241 AGLTSDNHRLAALKEIFEGTWEFYAVKTVFTAGETVAEGRVFGGVDGTVPLISEADIDVF 300

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +   + Y  ++       +          L
Sbjct: 301 LPRGGTLEYRLRVVYLGPLVAPIAAGTPAGEL 332


>gi|226305499|ref|YP_002765459.1| D-alanyl-D-alanine carboxypeptidase [Rhodococcus erythropolis PR4]
 gi|226184616|dbj|BAH32720.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus
           erythropolis PR4]
          Length = 437

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 114/331 (34%), Gaps = 29/331 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +        + L D  TG V+A   P   + PAS  K++ A V           L T
Sbjct: 106 APPLPADIAASGWVLADAETGEVLAAKDPHGRYRPASTIKMLLALVALDE-----LDLDT 160

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            IT +   ++   S     KG   T    ++ L++ S ND A A+A  L        + M
Sbjct: 161 EITATAEDADAEGSAVGIGKGGKYTNRQLMQGLVMASGNDAAHALARQLGGDAAAVSK-M 219

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK------- 191
           N  +  LG   T      G+   G  ++  D+A++      +                  
Sbjct: 220 NALAVELGALDTRTATPSGLDGPGMSSSPYDLAVIFHTALQNPTFAGLIHTETVEFPGFP 279

Query: 192 -------GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                    +  G    N N  +  + GA G KTGFT  +    V +A +  + L+  ++
Sbjct: 280 KDPTIPDDQDRPGFTLANDNQLLYNYDGALGGKTGFTDDARHTYVGAAERNGRKLLVTLM 339

Query: 245 GALDRNTR-NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           G   +  R  + +A LL  G+         +  +     ++  +  P+++          
Sbjct: 340 GGEAKPIRPWEQAARLLDYGYA-----LPASTTVGSLTDRSTDDATPDVTRTPSAAAPGS 394

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           I+       A D ES   D   I  +   + 
Sbjct: 395 ISAAP---TATDTESDTTDRILIGAVGGVVV 422


>gi|302335720|ref|YP_003800927.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Olsenella uli
           DSM 7084]
 gi|301319560|gb|ADK68047.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Olsenella uli
           DSM 7084]
          Length = 383

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 121/267 (45%), Gaps = 10/267 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L    +A+    +   +  +  +   + ++D + G+V+A   P+     AS+TK+MTA V
Sbjct: 14  LTTFLVAVSPCAYAAETTPQVTEAQSFEIIDQD-GNVLASKDPNRRMAMASITKIMTAMV 72

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                K     +    +I+          + +      T  + ++ ++V S ND A+ +A
Sbjct: 73  ALDSGK----SMGDVCSITDVTLPEGAQLAGYTSADAPTFGDLMRTMLVYSGNDAALNVA 128

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
            ++  TE+ FV+ MN  ++ +G+  THF N HG+ +  HY+ A D+A++      ++P  
Sbjct: 129 YAVAGTEEAFVELMNKKAREIGMEDTHFSNPHGLEEDDHYSCAHDLALMGKYALENYPFI 188

Query: 185 MHYFQIKGLEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                 + L +    + K + +T+  + ++ G  G+KTG    +G   + S+ +    L 
Sbjct: 189 ARTVMTRRLTVTVGGQQKTFESTDELMDSYGGLCGIKTGK-VEAGTTFLGSSKRHGLQLF 247

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNK 267
           + +LG    + R   +  L+   +   
Sbjct: 248 SCVLGCTTDDGRFTDTRILMDWAYDEY 274


>gi|171910636|ref|ZP_02926106.1| D-alanyl-D-alanine carboxypeptidase [Verrucomicrobium spinosum DSM
           4136]
          Length = 373

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 107/248 (43%), Gaps = 10/248 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            A   +     ++D  TG V+ E   D     AS  KL+TA ++          L   +T
Sbjct: 131 PAPKVQAERVIVVDAGTGEVLFEKNADRKAPVASTQKLLTALLLTE-----DGNLDQILT 185

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +  + ++  P     K G        L  L+VKS+NDIA A+A     T  +FV+ MN  
Sbjct: 186 VEPDDTKCAPVRLGIKAGEQYPRRQLLTALLVKSSNDIAQALARDNAGTMDEFVKKMNAR 245

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAI----LSWRIKTDFPQYMHYFQIKGLEIKG 197
           +  LG+  T F+N HG+   G Y+TARDMA     +              F  K  +   
Sbjct: 246 AAELGMKDTRFLNPHGLPADGQYSTARDMARVALTVDAVPDIRRMISTKSFVFKKNDGSW 305

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
               NTN  +  +   DGMKTG+  A+G+ +++S  + +   I V+L +       K S 
Sbjct: 306 INLENTNRVLRNYAFCDGMKTGYAQAAGYCLISSGEKDNHRRIVVVL-SDTSQAVWKDSQ 364

Query: 258 SLLSMGFY 265
           SLL     
Sbjct: 365 SLLEWSLK 372


>gi|262370309|ref|ZP_06063635.1| penicillin-binding protein 6B [Acinetobacter johnsonii SH046]
 gi|262314651|gb|EEY95692.1| penicillin-binding protein 6B [Acinetobacter johnsonii SH046]
          Length = 436

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 14/314 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+  +  IA           +       ET +   +T+ D+ +G VIAE+       PAS
Sbjct: 1   MKAVIYFIATLFALCSSFTQAALLNIVPETVEAQAWTVFDSQSGQVIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +   K   +  +T +   +   +  S    K+G  +++D  L  L+V
Sbjct: 61  LTKMMVAYIALKEINAGKLNKSEILTATPVVSTVMWDESQMYLKQGEQISVDQLLAGLVV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FV  MN  +K LG++ THF N  G+    HY+TA D+A+L
Sbjct: 121 MSANDAAVTLAERISGDIPNFVARMNQEAKALGMTETHFQNPAGITMPEHYSTAHDLALL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  + P Y++Y + +      + +  TN  +      DG+KTG+T A+G+N+  +A 
Sbjct: 181 GQALVNETPDYLYYSKQQSFSYNQRFHRATNVLLKQDPTVDGLKTGYTKAAGYNLALTAN 240

Query: 234 Q-------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +        ++ L+ ++LG      R +V+ +L+++ +    +   +           + 
Sbjct: 241 RPTMNPDNPNRRLVVIVLGTESATKRAEVAHNLMNLSYTYTRNEVALKDKQIIAELPVVK 300

Query: 287 NEVPNISEEVCTTQ 300
           + +     E    +
Sbjct: 301 STLKMFKVESKQPK 314


>gi|323483957|ref|ZP_08089330.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14163]
 gi|323693446|ref|ZP_08107657.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14673]
 gi|323402673|gb|EGA94998.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14163]
 gi|323502501|gb|EGB18352.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14673]
          Length = 431

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 122/344 (35%), Gaps = 36/344 (10%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      L+D +TG ++           AS TK+MT  +               + 
Sbjct: 64  AGPKLCAQSAVLMDASTGRILYGKEETIKRPMASTTKIMTCILALEQ-----GNPEDMVE 118

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           IS  A+  P      + G    L + L  L+++S ND AVA+AE +  T + F + MN  
Sbjct: 119 ISSYAASMPDVQLNIRAGEKYRLQDLLYSLMLESHNDSAVAVAEHIGGTVEGFAEMMNQK 178

Query: 142 SKNLGLSATHFMNAHGVVQHG------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           ++++G + T F+  +G+          H TTA D+A +        P+   + +I     
Sbjct: 179 ARDIGCTDTCFVTPNGLDGTRKADGEPHSTTAADLARIMRYCVEQSPKSREFLEITRTAS 238

Query: 196 KGKK---------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +              N N  +     A   KTGFT  +G+  VA+  + D+     +LG 
Sbjct: 239 RTITDESGKRSFYLGNHNALLSMMPEALSGKTGFTGNAGYCYVAALKKDDKEFTVALLGC 298

Query: 247 ---LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ--- 300
                +  + +    +    F +    +           + +  +   +   +C  +   
Sbjct: 299 GWPPHKTYKWEDMRKIAGFAFDSYDYYEIFEKNKTFPSLKIIDGKKDEVPLSLCLGEQDQ 358

Query: 301 ------KEIINYNTQMKEAKDKESHFIDFEKIT----LLKNKIT 334
                 +E    + + +  K+ ++       +      + N++ 
Sbjct: 359 TLKVLMREDETTDIRYEYPKELKAPVKAGTPVGSASYYVGNELV 402


>gi|257869614|ref|ZP_05649267.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus gallinarum EG2]
 gi|257803778|gb|EEV32600.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus gallinarum EG2]
          Length = 444

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 69/363 (19%), Positives = 131/363 (36%), Gaps = 43/363 (11%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +          +        +D +TG ++ +   + P   AS+TK+++ Y+V   +KE K
Sbjct: 33  TTFTAEEIKNFSIDAKAAFSVDFDTGKILYDQEGETPMGIASVTKIISLYLVAEQVKEGK 92

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT--- 130
                PI IS+ AS+   +           +   +K L   S    A A   +L +    
Sbjct: 93  LTWEDPIEISQYASDLSVTPDLSNVPLHRDVQYTVKDLYEASYIQSANAAVVALAEKIAG 152

Query: 131 -EKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYTTARDMAILSW 175
            E  FV  M +     G++    +NA G+                  +  +A+D+AI++ 
Sbjct: 153 SEPAFVDQMKDKLTEWGITDAKIVNASGLNNTYLGENLYPGSTSTDENELSAKDVAIVAR 212

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTCASGF 226
            +  DFP+ +              Y      N NW +  F     G DG+KTG T  +G 
Sbjct: 213 HLLQDFPEVLEVTSTVTKTFGEGSYSPVEMVNWNWMLPGFINAKDGVDGLKTGTTDLAGA 272

Query: 227 NIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK---- 278
             V +A++  Q +I V+L     A + + R   +  L+   F        ++   +    
Sbjct: 273 CFVGTAVRDGQRIITVVLNVNGHAENPSVRFTETGKLMDYSFDAWEQVPILSAGDQLADT 332

Query: 279 ---DFYQQNLSNEVPNISEEVCTTQKE---IINYNTQMKEAK--DKESHFIDFEKITLLK 330
                           + +++    ++     ++ T +   K  ++E+      K T L 
Sbjct: 333 KTVAVKNGKELTVPIAVKKDLSVWVRKDMDPKDFTTTIDYNKTMNEETVSAPVAKATNLG 392

Query: 331 NKI 333
              
Sbjct: 393 KVT 395


>gi|253578829|ref|ZP_04856100.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849772|gb|EES77731.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 421

 Score =  142 bits (357), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 132/350 (37%), Gaps = 35/350 (10%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P              L+D  +G V+ E   + P   AS TK++T  V           
Sbjct: 47  MTPVAEEPAELYALSAVLMDGESGRVLYEKDGERPLANASTTKVLTCIVALENSPG---- 102

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
               + +S+NA+  P      +KG    L++ L  L++KS ND AVAIAE    + + F 
Sbjct: 103 -DDYVQVSQNAASQPEVKLGLQKGEQYYLEDLLYSLMLKSHNDTAVAIAEHCGGSVEGFA 161

Query: 136 QHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + +N  +K +G   T+F+  +G+        H+TTA+D+A++      +   ++H  Q +
Sbjct: 162 RMLNRKAKQIGCKNTYFITPNGLDAEDENGKHHTTAKDLALIMRYAIKN-ETFLHIAQTR 220

Query: 192 GLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                     +     N N  +    G    KTG+T  +G+  V +  +  ++ I  +LG
Sbjct: 221 DYTFSEITGKRTFSVHNANAFLDMRDGVLAGKTGYTSQAGYCYVCAWEKEGKTFIVSLLG 280

Query: 246 ALDRNT---RNKVSASLLSMGFYNKTDRKKINYIIK-DFYQQNLSNEVPNISEEVCT--- 298
               N    +   +  LL  G YN                  +   +  +I  ++     
Sbjct: 281 CGWPNHKTYKWSDTEKLLDFGDYNYEYETYWKEPQTGKILVTDGVEDDQDIGTKIYLRGK 340

Query: 299 ------------TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                         K+      +++  +   +  +  EK+  +   +  K
Sbjct: 341 CSVTAYDREKEVLLKKGETVICKIEIPQKVSAPVLKGEKLGRIAYYLDGK 390


>gi|187918466|ref|YP_001884029.1| D-alanyl-D-alanine carboxypeptidase [Borrelia hermsii DAH]
 gi|119861314|gb|AAX17109.1| D-alanyl-D-alanine carboxypeptidase [Borrelia hermsii DAH]
          Length = 316

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 33/315 (10%)

Query: 1   MRQFLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+    I++  +L +IF        F     T       L+D +T  +     P+  + P
Sbjct: 1   MKIVFTILSFLILFSIFGKLFSIDLFDIERVTEDAKSVVLIDYDTKRIFYAKNPNLVFPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALK 109
           ASLTKL+T Y      ++K   L T + IS  AS Y      S    ++G  +  +  LK
Sbjct: 61  ASLTKLVTIYTALVEARKKNIDLKTIVPISSAASYYNLPLGSSLMFLEEGHKVNFEELLK 120

Query: 110 LLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L++ S ND A+AIAE +       FV  MN    NLGL   +F++  G       T A 
Sbjct: 121 GLVISSGNDAAIAIAEFIVGKNLSNFVNLMNINVLNLGLVNMNFVDTSGYCNGNQIT-AL 179

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGK--------------KYPNTNWAVGTFLGAD 214
           +MA+ +     +F   +    +K                     K  N N  +  +  AD
Sbjct: 180 EMALFARTYIEEFEFMLAIHSLKDFIYPRSENLGNTSSSKMLNLKQENRNVLIFNYPYAD 239

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDRNTRNKVSASLLSMGFYNKT 268
           G+KTG+   SG N+VA+A + D  LIAV+LG      ++    R  ++  L   GF N +
Sbjct: 240 GLKTGYIKTSGLNLVATAKKDDIRLIAVVLGVNKGINSVGEKKRALIAQKLFEYGFSNYS 299

Query: 269 DRKKINYIIKDFYQQ 283
               I  I K  Y  
Sbjct: 300 RFPFIGKIRKKIYNG 314


>gi|320354992|ref|YP_004196331.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Desulfobulbus
           propionicus DSM 2032]
 gi|320123494|gb|ADW19040.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Desulfobulbus
           propionicus DSM 2032]
          Length = 422

 Score =  142 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 8/261 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                   I +        ++D  +G  + E   D+P  PAS  K++TA +         
Sbjct: 164 VAAGDLAPIEKQISARSVMVMDAESGESLFEKMADNPRQPASTIKIVTAMIALK-----S 218

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 I +S+ A++ P S            ++ +  +++ SAND +VA+AE +  +E K
Sbjct: 219 LRNDDVINVSRRAADMPSSKIFLDPNRNYQANDLINAVLLASANDASVALAEKIAGSEDK 278

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   M  ++K  G   T    A G+   G  +TARD+A L               +    
Sbjct: 279 FATLMTLSAKMWGAKNTICRTASGLTADGQQSTARDLANLFRFAMQHDEFSRRMRERSIC 338

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
              GK   N N A+    GA G KTG+T A+    V    +  Q+++  I+G+       
Sbjct: 339 TSYGKTLRNHNKALWRLDGAVGGKTGYTIAARQTYVGQFSREGQTIVVAIMGSES---MW 395

Query: 254 KVSASLLSMGFYNKTDRKKIN 274
                L+  GF  K   +   
Sbjct: 396 ADLEKLVDYGFRRKKQEQLAQ 416


>gi|157150235|ref|YP_001450989.1| penicillin-binding protein 3 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075029|gb|ABV09712.1| penicillin-binding protein 3 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 412

 Score =  142 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 147/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +V++   +  +    + +             D NTG ++ E     P    SLTKL
Sbjct: 1   MKKIIVLLFTCLFCSFCTLVSADDFDVAAKNAIAFDVNTGKILYEKEATTPVPIGSLTKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           ++AY+V+  +K +K  + + + IS+ A   +     ++      + +++  L+  ++ +A
Sbjct: 61  LSAYLVYDAIKAEKITMDSQVEISEYALKLTTNYDISNLPLDKGSYSVEELLEASLIANA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N   +A+AE +  +EKKFV  M    K  G+S    +N+ G+                  
Sbjct: 121 NSATIALAEKIAGSEKKFVDLMKAKLKEWGISDAKIVNSTGLNNSHLGDNIYPNSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A DMA++S+ +  D+PQ ++  +       G +  ++N+ +        G DG+KT
Sbjct: 181 NQLSAYDMALISYHLIKDYPQVLNITEKTSFNFDGLEVNSSNYMLKDMPSYRKGVDGLKT 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKIN 274
           G +   G + +ASA + D  LI V+L   +           +AS++     N        
Sbjct: 241 GISDQGGLSFIASANERDMRLITVVLNVENAEEDIKALFLATASIMDYIANNFVVTTLAE 300

Query: 275 YIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                          +        S ++   Q+   +   ++   K+K+         T 
Sbjct: 301 KGTPYEDSHISVINGSEDQIKVVASNDLNIIQRIGSDSEPKVTFKKNKQEFKAPLAAHTP 360

Query: 329 LKNKITK 335
           +     K
Sbjct: 361 IGTLSYK 367


>gi|94989757|ref|YP_597857.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10270]
 gi|94543265|gb|ABF33313.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10270]
          Length = 410

 Score =  142 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAERIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|300814763|ref|ZP_07095011.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300511150|gb|EFK38402.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 446

 Score =  142 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 17/320 (5%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y L D  +G ++     D     AS +KL++ +VVF  +K+     +  +TI + +S
Sbjct: 83  SKSYLLGDYQSGKILEAYNIDEVRPMASTSKLVSIFVVFDKIKDGTISKSDELTIDRESS 142

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S    K+   MT+D+ +K  +V S ND   A+A+ +  + + F   MN   K+LGL
Sbjct: 143 ILGGSTFKLKENDKMTVDDLIKASMVVSGNDAITALAKHISGSVEAFSVLMNKKCKDLGL 202

Query: 148 SATHFMNAHGVVQH----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--P 201
              H +N  G+  +     +  T R+M ILS  +   +P+ ++Y +   L+ + + +   
Sbjct: 203 KNAHMVNPTGLTNYAIEDYNKMTTREMFILSCELIKYYPEILNYTKEAYLKDEDRNFLEY 262

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-------SLIAVILGALDRNTRNK 254
           NTN  +G     DG+KTG+T ASG  ++++ ++           L+ ++ G      R  
Sbjct: 263 NTNPILGIVPEIDGLKTGYTNASGRTVISTGLKKGIEGKSKDLRLVGIVTGCNGDWQRYV 322

Query: 255 VSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
               L+S GF N                +      +     I  +      +  N    +
Sbjct: 323 AIKRLMSKGFDNYEYTIFGTESKPIQNINVENAQDAQTPVFIKSKGYALVNKKENIKKDI 382

Query: 311 KEAKDKESHFIDFEKITLLK 330
           K   + ++     +K+  +K
Sbjct: 383 KIISELKAPIEAGKKVGTIK 402


>gi|145225445|ref|YP_001136123.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium gilvum
           PYR-GCK]
 gi|315445798|ref|YP_004078677.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium sp. Spyr1]
 gi|145217931|gb|ABP47335.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium gilvum
           PYR-GCK]
 gi|315264101|gb|ADU00843.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium sp. Spyr1]
          Length = 407

 Score =  142 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 60/297 (20%), Positives = 105/297 (35%), Gaps = 11/297 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G VIA   P     PAS+ K++TA          
Sbjct: 80  VITAPGTPPVPGDVSAEAWLVADLDSGDVIAARDPHGRHRPASIIKVLTAMQALR----- 134

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  +   +    +     +G   T+++ L  L++ S ND A A+A  +   + 
Sbjct: 135 DLPLMKTVPGTPEDAAQEGTKVGVGEGGVYTVNDLLHGLLMYSGNDAAHALAMQMGGMDT 194

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYF 188
              + +N  ++ LG   T      G+   G  T+  DM +       +            
Sbjct: 195 ALNK-INVLAQKLGARDTRVATPSGLDGPGMSTSVYDMGLFYRYAWHNPVFADIVATRAT 253

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GAL 247
           Q  G E  G    N N  +  + GA G KTG+T  +G   V +A +  + L+AV++ G  
Sbjct: 254 QFPGREGAGYPIENDNKLLANYPGALGGKTGYTDDAGQTFVGAAERDGRRLVAVLMRGTR 313

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
                 + +A LL  GF      K    I  D        +    +          +
Sbjct: 314 QPIAPWEQAARLLDYGFATAPGTKVGTLIEPDPSLGVDRADPAVAALTKTNANANAV 370


>gi|229550853|ref|ZP_04439578.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258538436|ref|YP_003172935.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus Lc
           705]
 gi|229315803|gb|EEN81776.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257150112|emb|CAR89084.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus Lc
           705]
          Length = 436

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 123/387 (31%), Gaps = 55/387 (14%)

Query: 1   MRQFLVIIAMAMLSNIF------------PFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++ L  +  AM++ +                S            ++  TG V+      
Sbjct: 1   MKKLLRGLVAAMVAVLMIGGAAPAASVAAAESSDTNLVNAKAAVAIEPTTGKVLYAKNAS 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TK+++  +V   +K  K      +T+ ++                     ++
Sbjct: 61  TVLPIASMTKMISIELVLDAIKSGKIKWDDKVTLDQSIWTISQDRDLSNVPLRRDGSYSV 120

Query: 109 KLLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
           + L   S    A A       ++  +++KFV  M+   K+ G++    +N  G+      
Sbjct: 121 RELYDASLIYSANAAMMLLAKAVAGSQEKFVNQMDAKLKSWGITDAKIVNVTGLNNSQLK 180

Query: 159 --------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW 205
                       +  +A+DMA ++  +  D P+ +    I     +          N +W
Sbjct: 181 DAKVPGTGDNAENEMSAKDMAQVAQHLIKDHPEVLKTTSIAKQTFRKGTDDAINMENWDW 240

Query: 206 A------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSA 257
                      L  DG+KTG + A+G     +  +    +I V+L A    +  R   + 
Sbjct: 241 MLKGLVSYDKNLPVDGLKTGTSDAAGDCFTGTVEKNGMRIITVVLHANGDAKTRRFDETK 300

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNE---------VPNISEEVCTT---QKEIIN 305
            L++    N       N          ++            P+            K+ + 
Sbjct: 301 KLMTHVLENWKTITLANAGQSIKGYSKVNVNRGASRTTPIAPSAKAVAVVPADASKKTLK 360

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKNK 332
           Y     +   K +     +K T + N 
Sbjct: 361 YTYTPAKGVKKNTIEAPVKKGTTIGNL 387


>gi|315650677|ref|ZP_07903733.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saburreum DSM
           3986]
 gi|315487054|gb|EFU77380.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saburreum DSM
           3986]
          Length = 466

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/323 (22%), Positives = 137/323 (42%), Gaps = 24/323 (7%)

Query: 4   FLVIIAMAMLSNIFPFLS----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            +++++++++S    +++               + + +TG  + E   D  + PAS+TK+
Sbjct: 11  LVLVLSISVISFAPEYMAVYADTKPDISAQGAAVYNADTGEFLYEKNGDKQFYPASITKI 70

Query: 60  MTAYVVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MT  +           L   IT S+      E   ++     G TM++ +AL  +++ SA
Sbjct: 71  MTGLLTVEQA-----NLDDTITFSRSATTNLESGSTSLGVVAGDTMSVRDALYGMMLASA 125

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           N+++  +AE +  +   F   MNN +K LG + T+F+N +G+    H TTA+DMA+++  
Sbjct: 126 NEVSNGLAEHVGGSVAGFANMMNNRAKELGATHTNFVNPNGLNNQNHVTTAKDMALIAAA 185

Query: 177 IKTDFPQY-------MHYFQIKGLEIKG--KKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              +             +   K        K +        ++ G  G KTG+T ++G  
Sbjct: 186 AFRNPTFRAVAGASSYSFPATKSKPTPKLIKMHHKMVTGEISYAGVIGGKTGYTKSAGNT 245

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLS 286
           +V +A +    LI V+L      T    +  LL  GF     D  +     ++       
Sbjct: 246 LVTAAERNGVRLIVVVLKCNG--THYTDTRKLLDYGFSIASKDTGRAVAKKQEAAPAKKQ 303

Query: 287 NEVPNISEEVCTTQKEIINYNTQ 309
              P   +EV  T+K+     T+
Sbjct: 304 EVAPVKKQEVAVTKKQEAAPKTE 326


>gi|160893432|ref|ZP_02074217.1| hypothetical protein CLOL250_00982 [Clostridium sp. L2-50]
 gi|156864827|gb|EDO58258.1| hypothetical protein CLOL250_00982 [Clostridium sp. L2-50]
          Length = 533

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 70/326 (21%), Positives = 138/326 (42%), Gaps = 28/326 (8%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            A      Y  +LD NTG+++ +        PAS+TKL+T  +     K     LT  +T
Sbjct: 91  KAPELASNYAIVLDANTGNILYQKNAFDKQYPASITKLLTFLLAIENTK-----LTDTVT 145

Query: 82  ISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC-KTEKKFVQH 137
           +S +A        S+    +G  +++++AL  ++++SAN++A  I E +   + + F + 
Sbjct: 146 MSHDAVFGIDRGSSHIGLDEGEQISMEDALYGMMLESANEVAWGIGEFVSGGSIEDFAKM 205

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ------------YM 185
           MN  +  LG   THF+NA+G+    HYTT  DMA+++                       
Sbjct: 206 MNERAVELGCLGTHFVNANGLPDENHYTTCYDMALITKACLKHDEFRKITGTRNHVIGPT 265

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
           +  + +    +  K  N + +   +   +G KTG+T  +   +V  + +GD  LI V++ 
Sbjct: 266 NICEEERQLWQHCKMTNPD-SKYYYEYCEGGKTGYTNDALNTLVTWSKKGDTELICVLMN 324

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE------VPNISEEVCTT 299
                     S ++    F N + +  +     D  Q + + +        + + ++   
Sbjct: 325 CNGAANTYTDSKAIYEYCFRNYSLQTPLADYTFDSTQTSQTLDYLNSYYKADSASDITLQ 384

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEK 325
             +    N    +   K ++ I++ K
Sbjct: 385 IDKDYKLNFNKNDDIKKLTYSIEYNK 410


>gi|262283277|ref|ZP_06061043.1| penicillin-binding protein 3 [Streptococcus sp. 2_1_36FAA]
 gi|262260768|gb|EEY79468.1| penicillin-binding protein 3 [Streptococcus sp. 2_1_36FAA]
          Length = 412

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 147/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ +V++ + +  +  P + +             D NTG ++ E     P    SLTKL
Sbjct: 1   MKKIIVLLFICLFCSFCPLVSADDFDVAAKNAIAFDLNTGKILYEKEATSPVPIGSLTKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNA---SEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           ++AY+V+  +K +K  + + + IS+ A   +     ++      + +++  L+  ++ +A
Sbjct: 61  LSAYLVYDAIKAEKITMDSQVEISEYALKLTTNYDISNLPLDKGSYSVEELLEASLIANA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N   +A+AE +  +EKKFV  M    K  G+S    +N+ G+                  
Sbjct: 121 NSATIALAEKISGSEKKFVDLMKAKLKEWGISDAKIVNSTGLNNSHLGDNIYPNSKKDEE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A DMA++S+ +  D+PQ ++  +       G +  ++N+ +        G DG+K 
Sbjct: 181 NQLSAYDMALISYHLIKDYPQVLNITEKTSFNFDGLEVNSSNYMLKDMPSYRKGVDGLKI 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASLLSMGFYNKTDRKKIN 274
           G +   G + +ASA + D  LI V+L   +           +AS++     N        
Sbjct: 241 GISDQGGLSFIASANERDMRLITVVLNVENAEEDIKALFLATASVMDYIANNFVVTTLAE 300

Query: 275 YIIK------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                          N        S  +   Q+   +   ++   K+K+         T 
Sbjct: 301 KGTPYEDSHISIINGNEDQIKAIASNNLNIIQRIGSDLEPKVTFKKNKQEFKAPLAAHTP 360

Query: 329 LKNKITK 335
           +     K
Sbjct: 361 IGTLSYK 367


>gi|146319524|ref|YP_001199236.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis 05ZYH33]
 gi|145690330|gb|ABP90836.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus suis 05ZYH33]
          Length = 415

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 137/356 (38%), Gaps = 31/356 (8%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+     P L+   +    +   ++ ++G ++ E   +   + AS++K ++ Y+V+  L 
Sbjct: 15  AVFLTSTPILAEDFSVAAKHAIAVEVSSGKILYEQDAETKASIASISKTLSIYLVYEALA 74

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
           + +  L T + IS            ++      + ++ + L   ++ S+N   +A+AE +
Sbjct: 75  KGEITLNTMVDISDYPYSLTSNTELSNVNLDERSYSVRDLLNASLITSSNSAIIALAEKI 134

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAIL 173
             +E  FV  M    +  G++ T  +N  G+                  +  +A D+AI+
Sbjct: 135 AGSEAAFVDRMKAKVQEWGITDTKIVNVSGLDNTDLGENIYPGSSPEDVNMFSALDVAII 194

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIV 229
           + R+  D+PQ +    +   +  G  Y +TN  +        G DG+KTG + ++G + +
Sbjct: 195 ARRLILDYPQVLDITSLNAYDFGGYTYYSTNQMLSDGTHARGGVDGLKTGTSNSAGSSFL 254

Query: 230 ASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------D 279
           A+  Q    +I V+L A         R   +  L++  + N +    +            
Sbjct: 255 ATTQQAGMRIITVVLNANDGLTSPENRFVATNDLMNYVYSNFSLVTLVKKSEAFGDSKIK 314

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +           + ++   Q+   +         D +      +  TL+     K
Sbjct: 315 VFNGEKETSPVVAAADLTVVQRNQTDNVPTATFTTDIKEIDAPLKAGTLVSKLQLK 370


>gi|229065037|ref|ZP_04200334.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|228716242|gb|EEL67956.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
          Length = 425

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 80/332 (24%), Positives = 129/332 (38%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 45  TGKILHEQNPDELLAIASMSKLIVIYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 104

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 105 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 164

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 165 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNH 224

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + GADG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 225 PKPIRMENWNWMLPGAAFAYEGADGLKTGSSDTAGYGFTITATRGDLRLISVIIKTKSMD 284

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S +L+  GF N   +K    K N I     +++     P     V T +     Y
Sbjct: 285 ERFTESRALIEYGFNNFEKQKLKIDKNNKISVVKGKEDYVTVAPEKEVTVVTAKGSKSPY 344

Query: 307 NTQMKEAKD---KESHFIDFEKITLLKNKITK 335
               +  K            +K   + + + +
Sbjct: 345 KISTEADKSFAEDGHLVAPIKKDAKVGSIVLE 376


>gi|257867724|ref|ZP_05647377.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus casseliflavus
           EC30]
 gi|257874051|ref|ZP_05653704.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus casseliflavus
           EC10]
 gi|257801807|gb|EEV30710.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus casseliflavus
           EC30]
 gi|257808215|gb|EEV37037.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus casseliflavus
           EC10]
          Length = 444

 Score =  142 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 64/341 (18%), Positives = 129/341 (37%), Gaps = 46/341 (13%)

Query: 4   FLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           F+  +A+   + + P +S A             +        +D +TG V+ +   +   
Sbjct: 11  FVAALAILFAAVVIPLVSYADDTAMSIEEIQDFSIDAKAAYSIDFDTGKVLYDQDGETAM 70

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS+TK+++ Y+V   +++       P+ IS  A+    S +         +   +K L
Sbjct: 71  GIASITKIISLYLVAEQVEQGTIAWDDPVPISDYAANLSVSPNLSNVPLHQDVTYTVKDL 130

Query: 112 IVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ------- 160
              S    A A   +L +    +E  FV  M    ++ G++    +NA G+         
Sbjct: 131 YDASYIQSANAAIVALAELIAGSESAFVDLMQEKVQSWGITDAKIVNASGLNNAYLGENI 190

Query: 161 -------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVG 208
                    +  +A+D+A+++  +  DFP  +    +   +     Y      N NW + 
Sbjct: 191 YPGSTSTDENELSAKDVALIARHLLQDFPDVLEVTSLSTKQFGEGSYSPVEMVNWNWMLP 250

Query: 209 TF----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLL 260
            F     G DG+KTG T  +G   V +A++  Q +I V+L     A + + R   +  L+
Sbjct: 251 GFTNTKDGVDGLKTGTTDMAGACFVGTAVKDGQRIITVVLNVNGHAENPSVRFIETGRLM 310

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
              F      + +    ++   ++         +E+     
Sbjct: 311 DYSFDAWEQVEIL---PENAQLEDTQTVAVKDGKELSVPVA 348


>gi|262172042|ref|ZP_06039720.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus MB-451]
 gi|261893118|gb|EEY39104.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus MB-451]
          Length = 317

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 9/280 (3%)

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   +K     L   + ISKNA        S    + G+T+ + +  + +I++S ND  
Sbjct: 1   MIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFIEVGTTVKVSDLNRGIIIQSGNDAC 60

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E  FV  MN  + +LG+  +HF N+HG+     Y+T  D+A+L   +  D
Sbjct: 61  VAMAEHVAGSEDAFVDLMNAWASSLGMKDSHFTNSHGLDDPNLYSTPYDLALLGQALIRD 120

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    +  +     G    N N       +  DG+KTG T  +G+N+V+SA +G+  L
Sbjct: 121 VPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRL 180

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           +AV++G  + N R   S  LLS GF                 +  +  +       + ++
Sbjct: 181 VAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIWMGDKDTVALGVDKD 240

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              T       +       +KE      +K  ++     +
Sbjct: 241 TYVTLPRGQAKDLTASFVLEKE-LKAPLKKGDVVGTLYYQ 279


>gi|221194412|ref|ZP_03567469.1| D-alanyl-D-alanine carboxypeptidase [Atopobium rimae ATCC 49626]
 gi|221185316|gb|EEE17706.1| D-alanyl-D-alanine carboxypeptidase [Atopobium rimae ATCC 49626]
          Length = 381

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 18/286 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS--------IAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M   + ++++A L+      +          E  +     L D + G+V+    PD    
Sbjct: 1   MFLLVAVMSLAPLALGISQYAYAADDTAAEPEITEAQSAILED-DQGNVLWSKDPDRKMG 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS+TK+MTA V           L  P  I     E     + +      TL   L++L+
Sbjct: 60  MASITKVMTAMVALDSG----IDLDKPCNIVSVDLEEGSVLANYSTSEHPTLRELLQVLL 115

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V SAND+A  IA ++  +++ F   MN  +  +G++ THF N HG+    HY+TARD+A+
Sbjct: 116 VHSANDVAYNIAINVAGSQEAFADLMNKKAAEIGMTNTHFSNPHGLDADDHYSTARDLAL 175

Query: 173 LSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           ++   +  +P       +  +      +   +P+T+  + T+ G  G+KTG +  SG   
Sbjct: 176 MARYAREHYPFLASTVSMTSVTATVQGEEVTWPSTDKLLSTYPGMLGLKTG-SEDSGTAF 234

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           + +A +   +L + +LG    + R   +  +   G+ + T     N
Sbjct: 235 LGAARRNGVTLYSCVLGCATDSGRFADTRIMYDWGYAHFTRIPACN 280


>gi|21909750|ref|NP_664018.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes MGAS315]
 gi|28895132|ref|NP_801482.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
           [Streptococcus pyogenes SSI-1]
 gi|94987881|ref|YP_595982.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS9429]
 gi|21903934|gb|AAM78821.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes MGAS315]
 gi|28810377|dbj|BAC63315.1| putative penicillin-binding protein (D-alanyl-D-alanine
           carboxypeptidase) [Streptococcus pyogenes SSI-1]
 gi|94541389|gb|ABF31438.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS9429]
          Length = 410

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|325478993|gb|EGC82094.1| serine-type D-Ala-D-Ala carboxypeptidase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 403

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 80/357 (22%), Positives = 160/357 (44%), Gaps = 29/357 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE--------TNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           R+F +   +++   +F  ++ A+           +  Y + +  TG +  E   D     
Sbjct: 4   RKFRLASLLSIFIFLFTSMAYAKGEGRIVGLDENVSAYLIGNEETGDIYYEKNADEVRPI 63

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITIS---KNASEYPPSNSTFKKGSTMTLDNALKL 110
           ASLTKLMT Y+V   ++E K  L T +      +  + +  S+   K+  T +++  L+ 
Sbjct: 64  ASLTKLMTFYLVRDAIEEGKISLDTNVKADKRAEELTSWEYSSLGLKENETYSVEELLQG 123

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV---VQHGHYTTA 167
           LI  S ND A  +A+++  +E+ F + MN  +K LGL +  + NA G+       + ++A
Sbjct: 124 LIAVSGNDCAHLLAKAVSGSEEAFTKKMNEKAKELGLESQKYYNASGIDTEDDKENVSSA 183

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--LGADGMKTGFTCASG 225
           RD+  LS  +   +P  ++Y  +  + I GK     +         G DG+KTG T  +G
Sbjct: 184 RDLYKLSMDLVKKYPDILNYSSMDEVNIPGKGIKKDSTIPLKNEIDGVDGLKTGTTEKAG 243

Query: 226 FNIVASAIQ------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           + ++ +          D   + V+LGA +++ R+ V + L+       +  K ++     
Sbjct: 244 YCLITTLDMKELDGNDDFRCLGVVLGADEKDIRDSVMSDLIYYVSRYYSCEKVLDTNRSV 303

Query: 280 FYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              + +S +   I    +E++    K+  + +T++   K+        +K  +L + 
Sbjct: 304 ESVEEVSAKQGYIDLYPAEDLTIISKDKKHVSTKINLDKN---IKAPIKKGQVLGSV 357


>gi|189218825|ref|YP_001939466.1| D-alanyl-D-alanine carboxypeptidase [Methylacidiphilum infernorum
           V4]
 gi|189185683|gb|ACD82868.1| D-alanyl-D-alanine carboxypeptidase [Methylacidiphilum infernorum
           V4]
          Length = 241

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 11/247 (4%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            L D  T  V+     D P+ PAS TKLMTA +V+     K       + I K  +   P
Sbjct: 1   MLYDATTHKVLFAKNDDVPFAPASTTKLMTALLVYEKTGFKG-----DVRIKKEDTLVQP 55

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S+     G  ++++  ++ L++ S ND A+A+A +   + +KFV+ MN  +++LG   TH
Sbjct: 56  SHVPLIAGEVISVNQLVEELLIGSCNDAALALARACSGSVEKFVEEMNQKAQSLGCVNTH 115

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK---GKKYPNTNWAVG 208
           F+N HG+ + G YTTARD+  +                 K         +   N N  +G
Sbjct: 116 FVNPHGLFEPGQYTTARDLMRIFQAAIKIPAINQICQTRKIHFQNGGISRVMYNHNRLLG 175

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            ++G    KTG+T  S     A+  +   +L   +L + D+      +  L   GF    
Sbjct: 176 RYMGMGPAKTGWTRISLHTYAAACERNGHTLYLTLLHSPDK---WYDARLLFDYGFAQLK 232

Query: 269 DRKKINY 275
            R     
Sbjct: 233 PRYTAEE 239


>gi|254693780|ref|ZP_05155608.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family protein [Brucella
           abortus bv. 3 str. Tulya]
          Length = 361

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 73/220 (33%), Positives = 115/220 (52%), Gaps = 1/220 (0%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           + ++       PASL K+MT Y+ F  LK  +      + ISKNA+         K G T
Sbjct: 2   LGQDDASAQHAPASLAKMMTLYLTFEALKTGRLHWDDALPISKNAASKVRMKLWLKAGDT 61

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-Q 160
           ++  +A+  +I+ SAND A  + E L  +E  F + M   ++ +G+ +T F N  G+   
Sbjct: 62  ISTRDAVNGMIIVSANDAATVMGEYLAGSEAAFARLMTQRARQIGMKSTIFANPSGLTAN 121

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               TTARDMA+L   ++ DFP+    F  +    +G+ Y   N  +  + G DG+KTG+
Sbjct: 122 VSQLTTARDMAVLGMALRRDFPEEYALFSQRSFTFRGRVYNGHNNLMYRYAGVDGIKTGY 181

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           T  SG+N+V+SA   ++ L+ V+LGA     R+   A LL
Sbjct: 182 TNVSGYNLVSSAYINNRHLVGVVLGAGSAGQRDGQMAKLL 221


>gi|229489552|ref|ZP_04383415.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus erythropolis
           SK121]
 gi|229323649|gb|EEN89407.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus erythropolis
           SK121]
          Length = 429

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 115/331 (34%), Gaps = 29/331 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +        + L D  TG V+A   P   + PAS  K++ A V           L T
Sbjct: 98  APPLPADIAASGWVLADAETGEVLAAKDPHGRYRPASTIKMLLALVALDE-----LDLDT 152

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            IT +   ++   S     KG   T    ++ L++ S ND A A+A  L        + M
Sbjct: 153 EITATAEDADAEGSAVGIGKGGKYTNRQLMQGLVMASGNDAAHALARQLGGDAAAVSK-M 211

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK------- 191
           N  +  LG   T      G+   G  +++ D+A++      +                  
Sbjct: 212 NALAAELGALDTRTATPSGLDGPGMSSSSYDLAVIFHTALQNPTFAGLIHTETVEFPGFP 271

Query: 192 -------GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                    +  G    N N  +  + GA G KTGFT  +    V +A +  + L+  ++
Sbjct: 272 KDPTIPDDQDRPGFTLANDNQLLYNYDGALGGKTGFTDDARHTYVGAAERNGRKLLVTLM 331

Query: 245 GALDRNTR-NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
           G   +  R  + +A LL  G+         +  +     ++  +  P+++          
Sbjct: 332 GGEAKPIRPWEQAARLLDYGYA-----LPASTTVGSLTDRSTDDASPDVTRTPSAAAPGS 386

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           I+       A D ES   D   I  +   + 
Sbjct: 387 ISAAP---TATDAESDTTDRILIGAVGGVVV 414


>gi|291550439|emb|CBL26701.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus torques L2-14]
          Length = 452

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 123/345 (35%), Gaps = 35/345 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D ++G ++           AS TK+MT  +               +T+S 
Sbjct: 63  QLYALSAVLMDADSGRILFSKNGQEERAMASTTKIMTCILALESSIMD--SENQIVTVSD 120

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+  P  +     G    L + L  L+++S ND  VAIAE++  + +KF   MN  ++ 
Sbjct: 121 QAATQPKVHLGMVAGERFYLKDLLYSLMLESHNDSGVAIAEAVAGSVEKFADLMNQKART 180

Query: 145 LGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----- 195
           +G  +T+F+  +G+        H+TTA D+A +      +  +   +  I   E      
Sbjct: 181 IGCYSTYFITPNGLDAADSNGIHHTTAEDLARIMRYCIMNSKKQEDFLTITRTETYQFQD 240

Query: 196 ----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +     N N  +    GA   KTGFT  +G+  V +  + +++ I  +L     N 
Sbjct: 241 VEGKRSFSCYNHNAFLNMMDGALSGKTGFTSDAGYCYVGALRRDERTFIVALLACGWPNN 300

Query: 252 ---RNKVSASLLSMGFYNKTDR-----------------KKINYIIKDFYQQNLSNEVPN 291
              +     +L++    +   +                 K  +  I    +      +  
Sbjct: 301 KSYKWSDMRTLMTYALDHYQYKTFEIELPVRQIFINNGIKARSDTIAYPGKNGTKISLTA 360

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               V    KE    +   +     ++      ++  ++  +  K
Sbjct: 361 NLTPVSFLLKEDETISVDYEIPDQLDAPVRKGMQVGRIRCTLNDK 405


>gi|282883288|ref|ZP_06291884.1| putative D-alanyl-D-alanine carboxypeptidase [Peptoniphilus
           lacrimalis 315-B]
 gi|281296856|gb|EFA89356.1| putative D-alanyl-D-alanine carboxypeptidase [Peptoniphilus
           lacrimalis 315-B]
          Length = 446

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 136/320 (42%), Gaps = 17/320 (5%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y L D  +G ++     D     AS +KL++ +VVF  +K+     +  +TI + +S
Sbjct: 83  SKSYLLGDYQSGKILEAYNIDEVRPMASTSKLVSIFVVFDKIKDGTISKSDELTIDRESS 142

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S    K+   MT+D+ +K  +V S ND   A+A+ +  + + F   MN   K+LGL
Sbjct: 143 LLGGSTFKLKENDKMTVDDLIKASMVVSGNDAITALAKHISGSVEAFSVLMNKKCKDLGL 202

Query: 148 SATHFMNAHGVVQH----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--P 201
              H +N  G+  +     +  T R+M ILS  +   +P+ ++Y +   L+ + + +   
Sbjct: 203 KNAHMVNPTGLTNYAIEDYNKMTTREMFILSCELIKYYPEILNYTKEAYLKDEDRNFLEY 262

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-------SLIAVILGALDRNTRNK 254
           NTN  +G     DG+KTG+T ASG  ++++ ++           L+ ++ G      R  
Sbjct: 263 NTNPILGIVPEIDGLKTGYTNASGRTVISTGLKKGIEGKSKDLRLVGIVTGCNGDWQRYV 322

Query: 255 VSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
               L+S GF N                +      +     I  +      +  N    +
Sbjct: 323 AIKRLMSKGFDNYEYTIFGTESKPIQNINVENAQDAQTPVFIKIKGYALVNKKENIKKDI 382

Query: 311 KEAKDKESHFIDFEKITLLK 330
           K   + ++     +K+  +K
Sbjct: 383 KIISELKAPIEAGKKVGTIK 402


>gi|50913625|ref|YP_059597.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10394]
 gi|50902699|gb|AAT86414.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10394]
          Length = 410

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYMVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFDGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|77409053|ref|ZP_00785771.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae COH1]
 gi|77172347|gb|EAO75498.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae COH1]
          Length = 395

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 71/344 (20%), Positives = 135/344 (39%), Gaps = 30/344 (8%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              + +      +   +D ++G ++ E   + P   ASLTK+MT Y+V+  +        
Sbjct: 3   TISAESFNASAKHALAVDLDSGKILYEKDANKPAAIASLTKIMTVYMVYKEIDNGNLKWN 62

Query: 78  TPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T + IS    +      +++   +    T+   +   ++ SAN  A+A+AE +  TE KF
Sbjct: 63  TKVNISDYPYQLTRESDASNVPLEKRRYTVKQLVDAAMISSANSAAIALAEHISGTESKF 122

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTD 180
           V  M    +  G+  +H +NA G+                  +  +ARD+AI ++ +  +
Sbjct: 123 VDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDENKMSARDIAIAAYHLVNE 182

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTF----LGADGMKTGFTCASGFNIVASAIQGD 236
           +P  +        +       + N+ +        G  G+KTG T  +G + +A++ +  
Sbjct: 183 YPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKTGTTELAGQSFIATSTESG 242

Query: 237 QSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
             L+ VI+ A     D+  R   + SLL+           +         +     V + 
Sbjct: 243 MRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLAKGAA---YKGKEASVRDG 299

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            E+      +      Q K    +    I+F+K   L   ITKK
Sbjct: 300 KEQSVIAVAKNDLKVVQKKNITKQNQLKINFKK--ELTAPITKK 341


>gi|326201672|ref|ZP_08191543.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           papyrosolvens DSM 2782]
 gi|325988272|gb|EGD49097.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           papyrosolvens DSM 2782]
          Length = 440

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 86/366 (23%), Positives = 142/366 (38%), Gaps = 36/366 (9%)

Query: 1   MRQFL--VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++ L  +I++  +L  + P            Y L+D  TG V+ E  PD  W PAS TK
Sbjct: 1   MKKVLATLIVSFILLFQVTPAFCANLDIDAASYILMDAKTGSVLYEYKPDLKWRPASTTK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           + TA V     K  + M  +   +S         N     G  M+L+N L  L++ SAN+
Sbjct: 61  IATALVALKEGKLDQMMTASNEAVSD--IGVGGMNIGIMPGEQMSLNNLLHALLIVSANE 118

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAIL- 173
            A  I+E+L   + KF+  MN  + + G   T F N  G+        H+++ARD+A++ 
Sbjct: 119 TANIISENLFNDKTKFLAEMNKFAADAGAKNTTFTNPCGIDEYEKDADHFSSARDLALIA 178

Query: 174 --------SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-----------AD 214
                      I             K          N         G             
Sbjct: 179 KECLKYPLFREIIGQKQLSTLPATNKHKTWNILNNTNKLLGKSFKYGPETGDDRNQYTIT 238

Query: 215 GMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTR--NKVSASLLSMGFYNKTDRK 271
           G+KTG T  +G N ++SA  +    LI+V+LG  ++  R     + +LL  G+ N + + 
Sbjct: 239 GLKTGSTSRAGANFISSAVNKDGLELISVVLGVNNKPNRSVFDFTKTLLKAGYENYSRQM 298

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK-----ESHFIDFEKI 326
            I+   K            +  + +     E +  N + +   DK     +      +K 
Sbjct: 299 IIDRSTKIQEITVKDAADGDKVDLITNGVIEALLPNDKTQWQLDKKINIRQDVKAPVKKG 358

Query: 327 TLLKNK 332
           T+L + 
Sbjct: 359 TVLGSI 364


>gi|298244964|ref|ZP_06968770.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297552445|gb|EFH86310.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 319

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 15/251 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     L+D   GHV+ + + +     AS TK+MTA +           L   IT+ 
Sbjct: 69  PVLQAKVAYLVDMQNGHVLYDIHGEQAAPMASTTKIMTALIAIQ-----TGNLDQEITVK 123

Query: 84  KNASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           ++A  +      SN+    G   TL   L  L++ S  D A+AI+++L  + + FV  MN
Sbjct: 124 RDAYLHVIELGSSNAGLVPGEQFTLRELLYGLMLPSGGDAAIAISDALAGSPENFVVRMN 183

Query: 140 NTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMHYFQIKG-----L 193
             +  L L  TH+ N  G+     HY++A D+  L+    T+                  
Sbjct: 184 LFASRLHLFQTHYTNVDGLTSEDTHYSSAADLTRLTRYALTNPIFRQIVDTPTYTLPTTK 243

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           +     + NTN  + T+ G  G+KTG T  +G+ +V  A +   SLI V+L + D+  R+
Sbjct: 244 QHGPHTWTNTNTLLSTYKGMLGVKTGHTDLAGYCLVFEAQRNGHSLIGVVLNSPDQAIRD 303

Query: 254 KVSASLLSMGF 264
           +  + LL+ GF
Sbjct: 304 QDVSKLLNWGF 314


>gi|322381780|ref|ZP_08055734.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321154168|gb|EFX46490.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 386

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 16/267 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L+D ++G ++     D     AS TK+MTA +     +     L+  + + K
Sbjct: 21  STHAEAAALIDVHSGRILYSQSGDKEMRVASTTKIMTAIIAIEQGR-----LSDMVKVGK 75

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA+    S+   K G  M+L N L  ++++S ND A+ IAE +  + + F   MN  +  
Sbjct: 76  NAAGKEGSSLYLKLGEEMSLHNLLYGMMLRSGNDAAITIAEHIGGSIEGFAYLMNEKASL 135

Query: 145 LGLSATHFMNAHGVVQ---HGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIKG 197
           LG++ THF N  G+       HY++A DMA L+     +            +        
Sbjct: 136 LGMAHTHFTNPSGLDDGKEMKHYSSANDMAKLTAYALKNPVFRDIVKTKTKKAPNPNANW 195

Query: 198 -KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
              + N N  +  + GADG+KTG+T  +   +V+SA +G+Q L AV L   +        
Sbjct: 196 DYSWSNKNKMLNLYEGADGVKTGYTKLAYRCLVSSATRGNQQLAAVTLNDGND---WADH 252

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           A LL  GF     ++ +          
Sbjct: 253 AKLLDYGFETYPLKQVLQKGETVSGTN 279


>gi|167462338|ref|ZP_02327427.1| D-alanyl-D-alanine carboxypeptidase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 395

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 16/267 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L+D ++G ++     D     AS TK+MTA +     +     L+  + + K
Sbjct: 30  STHAEAAALIDVHSGRILYSQSGDKEMRVASTTKIMTAIIAIEQGR-----LSDMVKVGK 84

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           NA+    S+   K G  M+L N L  ++++S ND A+ IAE +  + + F   MN  +  
Sbjct: 85  NAAGKEGSSLYLKLGEEMSLHNLLYGMMLRSGNDAAITIAEHIGGSIEGFAYLMNEKASL 144

Query: 145 LGLSATHFMNAHGVVQ---HGHYTTARDMAILSWRIKTDF----PQYMHYFQIKGLEIKG 197
           LG++ THF N  G+       HY++A DMA L+     +            +        
Sbjct: 145 LGMAHTHFTNPSGLDDGKEMKHYSSANDMAKLTAYALKNPVFRDIVKTKTKKAPNPNANW 204

Query: 198 -KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
              + N N  +  + GADG+KTG+T  +   +V+SA +G+Q L AV L   +        
Sbjct: 205 DYSWSNKNKMLNLYEGADGVKTGYTKLAYRCLVSSATRGNQQLAAVTLNDGND---WADH 261

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           A LL  GF     ++ +          
Sbjct: 262 AKLLDYGFETYPLKQVLQKGETVSGTN 288


>gi|312199939|ref|YP_004020000.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Frankia sp.
           EuI1c]
 gi|311231275|gb|ADP84130.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Frankia sp.
           EuI1c]
          Length = 437

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 12/284 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A L+      S+        + + D +TG ++A    D    PAS  K++TA VV     
Sbjct: 61  AALAVGAGATSLPGQLTSAGWLVADADTGQILAAKGADTRDLPASTMKILTALVVLP--- 117

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                    +T+ ++A     +      G +  + +    +++ S ND  VA+ +++   
Sbjct: 118 --GLAPDRRVTVGRDAVTVDGTKVGLVPGQSYLVRDLATAMLIASGNDATVALVDAV-GG 174

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
               V  MN  + +LG + TH ++  G+   G  ++ RD+AIL            +    
Sbjct: 175 RDAVVARMNALAASLGATDTHAVDPTGLDAPGQLSSVRDLAILGRAAIAQPVISRYLTIP 234

Query: 191 K----GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +           +  N N  +G + G  G+K G+T A+    V +A +G ++L+  +L A
Sbjct: 235 RAVLPTPNGGSFEIQNHNLLLGRYPGTLGVKNGYTVAADATYVGAARRGGRTLVVALLRA 294

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
                    + +LL  GF N      +  +        + +EVP
Sbjct: 295 --APNYAADARALLDWGFANDGVAAPVGMLPAPPPAPTVGDEVP 336


>gi|325679044|ref|ZP_08158638.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus
           albus 8]
 gi|324109168|gb|EGC03390.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus
           albus 8]
          Length = 359

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/334 (20%), Positives = 119/334 (35%), Gaps = 18/334 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L ++ +  +S I                + +  T  V+ E   D     AS TK+M+A +
Sbjct: 15  LALMLIFSISRINVSAEELPDVSAKAAIVYNGATDEVLFEKNADEQLPMASTTKIMSALI 74

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           V          L     +   A     S+   +KG  ++L +    +++ S ND A A A
Sbjct: 75  VLEQND-----LDERFIVDSQAIMTEGSSMGLQKGDEVSLRDLACGMLLPSGNDAANAAA 129

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--GHYTTARDMAILSWRIKTDFP 182
             +  +   FV+ MN  +  +GL  THF+   G+  +   HY+TARDMA L+     D  
Sbjct: 130 VRVAGSVDAFVELMNRRAAEMGLFDTHFVTPSGLDDYTDDHYSTARDMAKLAAEAMKDQN 189

Query: 183 QYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                   K           +   N+N  +    G  G+KTGFT  +   +V+S ++   
Sbjct: 190 FRDICSLQKAKVFFGDPPYDRWLINSNKLLKI-SGITGIKTGFTDKARRCLVSSCMREGC 248

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
            LI V L   D     +   +L    F      +               +E+     ++ 
Sbjct: 249 ELICVTLNDPDD---WRDHMALFDHCFGKVEQMRIRPRNSAVKIPVADGSEIVCEIPDMV 305

Query: 298 TTQKE--IINYNTQMKEAKDKESHFIDFEKITLL 329
            T          +++             EK+  +
Sbjct: 306 MTMMPETAQKVESRLFLPHFIYRPIKKDEKLGEV 339


>gi|331269468|ref|YP_004395960.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           BKT015925]
 gi|329126018|gb|AEB75963.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           BKT015925]
          Length = 381

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 127/310 (40%), Gaps = 15/310 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                   +D+ T  V+ E   +     AS TK+MT  V   +       L     +S  
Sbjct: 42  IDARSAIAIDSKTKCVLYEKNAEMLLPIASTTKIMTTLVALKY-----GNLDDKFQVSAK 96

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+    S   +KKG ++ L   L  L+++S ND A+ IAE L  + +KF + MN  +  +
Sbjct: 97  AASIRGSQVGYKKGESVALKELLYGLMLRSGNDAAITIAEGLSGSVEKFCELMNEYAVEI 156

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSW----RIKTDFPQYMHYFQIKGLEIKGKKYP 201
           G   +HF + HG+    HY+TA D+A ++         +    +   + K      + Y 
Sbjct: 157 GALNSHFESPHGLDSQNHYSTAYDLARITAKAKENELFNKIVGVKDVEAKEYGF-TRSYH 215

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           N N  +     A+G+KTG+T  +G  +V S    D  +I V+L       R K +  +  
Sbjct: 216 NINKILYQIPNANGVKTGYTGGAGKCLVTSVKDHDDDIIIVVLNCT---PRWKETGKIYK 272

Query: 262 MGFYNKTDRKKINY--IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
               N   +K  +   ++ +   ++         +++     +  +   ++ + K+  S+
Sbjct: 273 FVKENYDFKKIASKNQVVDNIVYKDNKKINLISDKDIVVPVGKQEHCEFKVVKPKNIPSN 332

Query: 320 FIDFEKITLL 329
                 +  +
Sbjct: 333 VYKGMDLGKI 342


>gi|306828006|ref|ZP_07461272.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus pyogenes
           ATCC 10782]
 gi|304429787|gb|EFM32830.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus pyogenes
           ATCC 10782]
          Length = 410

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHVIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFDGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|225574473|ref|ZP_03783083.1| hypothetical protein RUMHYD_02548 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038323|gb|EEG48569.1| hypothetical protein RUMHYD_02548 [Blautia hydrogenotrophica DSM
           10507]
          Length = 409

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/313 (19%), Positives = 119/313 (38%), Gaps = 22/313 (7%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + +N                 +++ +T  ++     D    P+S+TK+MT  +       
Sbjct: 38  IATNSIEGWPQGPDITSNAAVIMEDSTNTILYAKNKDAALYPSSITKIMTTLIALENS-- 95

Query: 72  KKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
               L   +T+++  +    +   +   + G T T++  L  +++ SANDI+  IAE + 
Sbjct: 96  ---SLADTVTMTQTGTAASGNGSVSLNAQVGETFTMEQCLYAIMLGSANDISTQIAEQVG 152

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + + FV  MN  +K+LG + T+F N  G+      +TA D+A++      +        
Sbjct: 153 GSVENFVTMMNQKAKDLGCTNTNFTNPTGLPDEKQTSTAYDLALIMQAALKNESFQTIAS 212

Query: 189 QIKGL------EIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            +             +   N        +   + G  G K+G+T ASG  + A A +   
Sbjct: 213 AMTYTIPATNLTSAERNLTNNFPLSTATSASYYEGTLGGKSGYTEASGSTLAAGASRNGT 272

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
           +LI V+L +         + +LL  GF N       + +  +      +      S +  
Sbjct: 273 TLICVVL-SGTEQQVPPEAITLLDYGFSNFQTISVTDEL--NTISGGTAVIPSTASADDV 329

Query: 298 TTQKEIINYNTQM 310
           T +      +   
Sbjct: 330 TVENTGTTDDGIS 342


>gi|257876629|ref|ZP_05656282.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus casseliflavus
           EC20]
 gi|257810795|gb|EEV39615.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus casseliflavus
           EC20]
          Length = 444

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/341 (18%), Positives = 128/341 (37%), Gaps = 46/341 (13%)

Query: 4   FLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           F+  +A+   +   P +S A             +        +D +TG V+ +   +   
Sbjct: 11  FVAALAILFAAVGIPLVSYADDTAMSIEEIQDFSIDAKAAYSIDFDTGKVLYDQDGETAM 70

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS+TK+++ Y+V   +++       P+ IS  A+    S +         +   +K L
Sbjct: 71  GIASITKIISLYLVAEQVEQGTIAWDDPVPISDYAANLSVSPNLSNVPLHQDVTYTVKDL 130

Query: 112 IVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ------- 160
              S    A A   +L +    +E  FV  M    ++ G++    +NA G+         
Sbjct: 131 YDASYIQSANAAIVALAELIAGSESAFVDLMQEKVQSWGITDAKIVNASGLNNAYLGENI 190

Query: 161 -------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVG 208
                    +  +A+D+A+++  +  DFP  +    +   +     Y      N NW + 
Sbjct: 191 YPGSTSTDENELSAKDVALIARHLLQDFPDVLEVTSLSTKQFGEGSYSPVEMVNWNWMLP 250

Query: 209 TF----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLL 260
            F     G DG+KTG T  +G   V +A++  Q +I V+L     A + + R   +  L+
Sbjct: 251 GFTNTKDGVDGLKTGTTDMAGACFVGTAVKDGQRIITVVLNVNGHAENPSVRFIETGRLM 310

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
              F      + +    ++   ++         +E+     
Sbjct: 311 DYSFDAWEQVEIL---PENAQLEDTQTVAVKDGKELSVPVA 348


>gi|52140174|ref|YP_086656.1| D-alanyl-D-alanine carboxypeptidase (serine-type D-Ala-D-Ala
           carboxypeptidase) [Bacillus cereus E33L]
 gi|51973643|gb|AAU15193.1| D-alanyl-D-alanine carboxypeptidase (serine-type D-Ala-D-Ala
           carboxypeptidase) [Bacillus cereus E33L]
          Length = 418

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N I     +++     P     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKINKNNTISVVQGKEDQVTVTPEKEITVIAKKGSKDPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPVKKGAKVGSITLE 374


>gi|317056794|ref|YP_004105261.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
 gi|315449063|gb|ADU22627.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
          Length = 387

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 130/344 (37%), Gaps = 12/344 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK---------LPYYTLLDTNTGHVIAENYPDHPWN 52
           + F+ I+ + +   +    S AE                  ++ NTG V+ E        
Sbjct: 6   KLFVFILCLILSGCMMSECSFAEKVSVEDMLYAMPAREIIAVECNTGQVLFEKNSCEKTE 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            + L KLM   +    LK  +  LT  +T+S NA+  P       K   ++ +  LK + 
Sbjct: 66  ISHLAKLMLVLLAAEKLKSGELSLTDTVTVSANANSMPAPQIWLDKNEKISAEELLKAIT 125

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + +AND AVA+AE +  +    V  MN  +K L +  T + +  G+        A    +
Sbjct: 126 IGNANDAAVALAEHIFGSTDNAVTQMNRKAKLLDMKLTEYADVCGLDSRTVADAADTAKL 185

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
            S  +K D         I  +     +  N N  V T+ G  GMK   + A+G   V +A
Sbjct: 186 ASELVKYDILTDYFKTWIDRVRSGKAELVNLNRLVRTYKGISGMKACSSSAAGECSVVTA 245

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK---INYIIKDFYQQNLSNEV 289
            +GD  +  V+LG  DR+  + ++  LL M F   +        + +     +    N V
Sbjct: 246 SRGDMEVAVVVLGCTDRSMCDDIAQKLLDMSFDMYSLYTPEISEDMLDDIPVEGGEKNSV 305

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           P    E+        +  +     + ++      E   +    I
Sbjct: 306 PVTFGELFPVAVPSGSSGSIDISFEKEDILTAPVEMGQICGKLI 349


>gi|75764308|ref|ZP_00743843.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74488202|gb|EAO51883.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 349

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/295 (26%), Positives = 124/295 (42%), Gaps = 17/295 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++  +G V+       P   AS+
Sbjct: 51  MRRICVIITLLIMYASVMPIPTYAKMNSNVSARNAVLMEQQSGRVLYGKAEHEPQKIASI 110

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       +++S  A     S    K G  + L++ +  L+++S 
Sbjct: 111 TKIMTALLAAESGKMK-----EMVSVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 165

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAES+  +   FV  MN  +K +G+  THF N HG+     HY++A DMA+L+ 
Sbjct: 166 NDAAQVIAESVGGSIDGFVYLMNEKAKEIGMKDTHFSNPHGLDGDGSHYSSAYDMALLTK 225

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV---GTFLGADGMKTGFTCASGFNIVASA 232
               +   +   F  K  +     YP  N        +  A G KTGFT  +G  +V +A
Sbjct: 226 YAMGNES-FKKIFGTKTYKSDSWDYPWKNKHKLVTSYYEFATGGKTGFTKKAGRTLVTTA 284

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
            +    LI V L A           +L   GF      K +         +    
Sbjct: 285 SKDGLDLIVVTLSASSD---WDDHMNLFDKGFERFKQTKVLGQGAIAEINEKKYA 336


>gi|291563035|emb|CBL41851.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SS3/4]
          Length = 459

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 20/261 (7%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            T       L D   G V+ E   D    PAS TKLMTA +V          L   +T S
Sbjct: 93  PTISAEAGILYDVTNGRVLFEKNADEKLAPASTTKLMTALLVLEKA-----NLDDKVTFS 147

Query: 84  K---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           K      E         +G  +++ ++L  L++KSAN++A  +AE +  +   F + MN 
Sbjct: 148 KTAVTNLESGAVKIGLVEGDQVSVKDSLYALLLKSANEVANGLAEHVSGSISAFAELMNA 207

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR-------IKTDFPQYMHYFQIK-- 191
            +  LG + THF+N +G+     YTT RDMA ++          + D      +   K  
Sbjct: 208 RAAELGCTNTHFVNPNGLNSDQQYTTCRDMAKIAAAAFANKTLCEIDSTLSYKFPATKAA 267

Query: 192 -GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
               I              + G  G KTG+T  +G  +V    +    ++AVIL    ++
Sbjct: 268 AARTITPGHKMLYPNDSRYYAGIVGGKTGYTSKAGNTLVTCVEKNGVRMVAVIL--KSKS 325

Query: 251 TRNKVSASLLSMGFYNKTDRK 271
           T  + +  +L  G+      K
Sbjct: 326 THYEDTKKMLDYGYQYVNTEK 346


>gi|262165190|ref|ZP_06032927.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM223]
 gi|262024906|gb|EEY43574.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM223]
          Length = 317

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 9/280 (3%)

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   +K     L   + ISKNA        S    + G+T+ + +  + +I++S ND  
Sbjct: 1   MIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFIEVGTTVKVSDLNRGIIIQSGNDAC 60

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  +E  FV  MN  + +LG+  +HF N+HG+     Y+T  D+A+L   +  D
Sbjct: 61  VAMAEHVAGSEDAFVDLMNAWASSLGMKDSHFTNSHGLDDPNLYSTPYDLALLGQALIRD 120

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    +  +     G    N N       +  DG+KTG T  +G+N+V+SA +G+  L
Sbjct: 121 VPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRL 180

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           +AV++G  + N R   S  LLS GF                 +  +  +       + ++
Sbjct: 181 VAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIWMGDKDTIALGVDKD 240

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              T       +       +KE      +K  ++     +
Sbjct: 241 TYVTLPRGQAKDLTASFVLEKE-LKAPLKKGDVVGTLYYQ 279


>gi|315652015|ref|ZP_07905016.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saburreum DSM
           3986]
 gi|315485662|gb|EFU76043.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saburreum DSM
           3986]
          Length = 492

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 29/306 (9%)

Query: 1   MRQFLVIIAMAMLS-NIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +++  + + +A+++  I P  + A                L+D ++G VI        + 
Sbjct: 13  LKKITLTLFLALITMFILPLKAFAYVDWPENVNVLSEGAILMDADSGAVIYGKNMHEHYY 72

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALK 109
           PAS+TK++TA +V          L   +T S+NA        S++    G T+T+ + L 
Sbjct: 73  PASITKILTALIVVENC-----NLDDTVTFSRNAVYNVESGSSSAGIDVGDTLTVRDCLY 127

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            ++++SAN+ A A+AE    +   F + MN+ + +LG   +HF N  G+    HYT+A D
Sbjct: 128 AMLLQSANEAANALAEHTAGSIDAFAKMMNDKAASLGCKDSHFANPSGLNDPEHYTSAYD 187

Query: 170 MAILSWRIKTDFPQ-------YMHYFQIKGLEIKGKKYPNTNWAVG----TFLGADGMKT 218
            A++S     +          Y +      +      Y + +         +  A   KT
Sbjct: 188 YALISRAAFKNPTVTEIDSATYYNLPPTSRVPTGQTLYSHHSMLRKNSGNYYKNAICGKT 247

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+T  +G  +V  A      LI V+L      T    + SLL  GF N  D K  +  I 
Sbjct: 248 GYTTLAGNTLVTYARTDKIGLITVVLNGN--KTHYIDTQSLLDFGFANFKDIKLKSSSIG 305

Query: 279 DFYQQN 284
             ++ N
Sbjct: 306 TSFKSN 311


>gi|295108761|emb|CBL22714.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 412

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 13/262 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A   +     L+D  +G ++     D    PAS+TK+MT  +    L    A  T   
Sbjct: 64  VKAPQIEGESAILVDMLSGTILYSKNADKAQYPASITKIMTGLLGCENLDL-SAKFTMTE 122

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           + +++ +E   S+     G   T++ AL  ++++SAN++ +A+AE    + KKFV+ MN 
Sbjct: 123 SAARSITESNSSSIYADTGEEFTVEQALMAVMLQSANEMTLAVAELTSGSTKKFVEQMNL 182

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY------MHYFQIKGLE 194
            ++ LG + THF N +G+    HYTTA DMA ++     +F          +        
Sbjct: 183 KARQLGCTNTHFNNPNGLPDETHYTTAADMAKIARAAWFNFTFRKFVTTGYYEIPPTNKF 242

Query: 195 IKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            + +   N +  +      + G  G KTG+T A+G  +V  A   +  L+AV++     N
Sbjct: 243 AETRYLLNHHKMMSGQTYAYDGVLGGKTGYTEAAGNTLVTYAKNDNTYLVAVVM--QSVN 300

Query: 251 TRNKVSASLLSMGFYNKTDRKK 272
                + +LL  GF N +  K 
Sbjct: 301 GAYSDTKALLDYGFNNFSRSKI 322


>gi|224531645|ref|ZP_03672277.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia valaisiana
           VS116]
 gi|224511110|gb|EEF81516.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia valaisiana
           VS116]
          Length = 401

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 79/321 (24%), Positives = 127/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L   + IS  AS
Sbjct: 40  AKSIVLMDFDTKRILYSKKPNLVFPPASLTKIVTIYTALIEAEKRNIKLKNIVPISDAAS 99

Query: 88  EYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND A+AIAE +      FV  MN  + 
Sbjct: 100 YYNAPLNSSLMFLEKGQIVNFEEILKGLSVSSGNDAAIAIAEFVVGDVNSFVNLMNINAL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
           NLGL   HF+   G     +  TA DMA  +      F   ++   ++            
Sbjct: 160 NLGLFNMHFVEPSGYSN-ENKITALDMAFFAKSYIEKFKFMLNIHSLEYFVYPKSKNLGI 218

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG---- 245
                    K  N N  +  +  +DG+KTG+   SG NI+A+A++G++ LIAV+LG    
Sbjct: 219 TLSSKFLNLKQKNANLLISEYPYSDGLKTGYIRESGLNIIATALKGERRLIAVVLGVKKG 278

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R  ++ +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGSGEKIRALIAKNLFEYGFNEYSKFPLIVKLQEKVYNGTVDTVALFSKEPFYYVLTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|216264541|ref|ZP_03436533.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           156a]
 gi|224532771|ref|ZP_03673388.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           WI91-23]
 gi|226320832|ref|ZP_03796385.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           29805]
 gi|215981014|gb|EEC21821.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           156a]
 gi|224512389|gb|EEF82773.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           WI91-23]
 gi|226233774|gb|EEH32502.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           29805]
          Length = 405

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLMDFDTKRILYSKKPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 100 YYNAPPNSSLMFLEKGQIVNFEEILKGLSVSSGNDSSIAIAEFVVGNLNSFVNLMNINVL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---------- 193
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSG-YSSENKITALDMAFFVKSYIEKFKFMLNIHSLKYFIYPKSRNLGT 218

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG---- 245
               +    K  N N  +  +  +DG+KTG+   SG N+VA+A +G++ LIAV+LG    
Sbjct: 219 ALSSKFLNLKQRNANLLIYDYPYSDGIKTGYIKESGLNLVATAKKGERRLIAVVLGVEKG 278

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R+ ++ +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGFGEKMRSSIAKNLFEYGFNKYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYILTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|269928430|ref|YP_003320751.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787787|gb|ACZ39929.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sphaerobacter
           thermophilus DSM 20745]
          Length = 326

 Score =  140 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 118/261 (45%), Gaps = 16/261 (6%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +       +         + ++D  +G V+    P      ASLTK++TA V        
Sbjct: 18  IVLTARPAAARPDVAARNWIVMDGASGDVLDAQEPHQRTAIASLTKMLTALVAVE----- 72

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +A L   +T+ + +     S++  ++G  ++L   L  L++ S ND A+AIA ++  +  
Sbjct: 73  RADLEQVVTVMR-SDLIRGSSARLREGERLSLRTLLYGLLLPSGNDAALAIARAVGGSPH 131

Query: 133 K--------FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
                    F+  MN  + +LGL+ T  +N HG+    H+ +A D+A+++  +  + P  
Sbjct: 132 ADDQAARGRFIDWMNERAVSLGLTDTRVVNPHGLDARDHFGSAHDLALVTRAVL-ESPVL 190

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              F       +G +Y +TN     + G  G KTG+T A+G  +V  A +  + +I V+L
Sbjct: 191 APIFGAHDYSGEGHRYESTNKLWERYPGIIGGKTGWTRAAGHCLVEVAERDGRRVIVVLL 250

Query: 245 GALDRNTRNKVSASLLSMGFY 265
           G+         +  LL  GF 
Sbjct: 251 GSTSER-WYDDATVLLDHGFA 270


>gi|224533632|ref|ZP_03674221.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           CA-11.2a]
 gi|225549566|ref|ZP_03770532.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           118a]
 gi|224513305|gb|EEF83667.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           CA-11.2a]
 gi|225369843|gb|EEG99290.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi
           118a]
          Length = 405

 Score =  140 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLMDFDTKRILYSKKPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 100 YYNAPPNSSLMFLEKGQIVNFEEILKGLSVSSGNDSSIAIAEFVVGNLNSFVNLMNINVL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---------- 193
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSG-YSSENKITALDMAFFVKSYIEKFKFMLNIHSLKYFIYPKSRNLGT 218

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG---- 245
               +    K  N N  +  +  +DG+KTG+   SG N+VA+A +G++ LIAV+LG    
Sbjct: 219 ALSSKFLNLKQRNANLLIYDYPYSDGIKTGYIKESGLNLVATAKKGERRLIAVVLGVEKG 278

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R+ ++ +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGFGEKMRSSIAKNLFEYGFNKYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYILTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|300986937|ref|ZP_07177913.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 45-1]
 gi|300407823|gb|EFJ91361.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS 45-1]
 gi|307626443|gb|ADN70747.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli UM146]
 gi|315295235|gb|EFU54570.1| serine-type D-Ala-D-Ala carboxypeptidase [Escherichia coli MS
           153-1]
          Length = 321

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 11/284 (3%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIV 113
           MT YVV   +   +      +T+ ++A                K+G  +++ +  + LIV
Sbjct: 1   MTGYVVDRAIDSHRITPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLSRGLIV 60

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND  VA+A+ +   +++FV+ MNN ++ L L  THF   HG+   G +++A D+A+L
Sbjct: 61  DSGNDACVALADYIAGGQRQFVEMMNNYAEKLHLKDTHFETVHGLDAPGQHSSAYDLAVL 120

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA 232
           S  I    P++ H +  K L   G    N N       +  DG+KTG T  +GFN++ASA
Sbjct: 121 SRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAGFNLIASA 180

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNE 288
           + G + LIAV++GA     R + +  LL  G  N T  + ++   K      +  +  N 
Sbjct: 181 VDGQRRLIAVVMGADSAKGREEEARKLLRWGQQNFTTVQILHRGKKVGTERIWYGDKENI 240

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +E      +    + + K   D +           +   
Sbjct: 241 ALGTEQEFWMVLPKAEIPHIKAKYTLDGKELTAPISAHQRVGEI 284


>gi|225548661|ref|ZP_03769708.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi 94a]
 gi|225370691|gb|EEH00127.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi 94a]
          Length = 405

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLMDFDTKRILYSKKPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 100 YYNAPPNSSLMFLEKGQIVNFEEILKGLSVSSGNDSSIAIAEFVVGNLNSFVNLMNINVL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---------- 193
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSG-YSSENKITALDMAFFVKSYIEKFKFMLNIHSLKYFIYPKSRNLGT 218

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG---- 245
               +    K  N N  +  +  +DG+KTG+   SG N+VA+A +G++ LIAV+LG    
Sbjct: 219 ALSSKFLNLKQRNANLLIYDYPYSDGIKTGYIKESGLNLVATAKKGERRLIAVVLGVEKG 278

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R+ ++ +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGFGEKMRSSIAKNLFEYGFNKYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYILTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|224534683|ref|ZP_03675255.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia spielmanii A14S]
 gi|224513931|gb|EEF84253.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia spielmanii A14S]
          Length = 401

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 128/336 (38%), Gaps = 25/336 (7%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L  +        +       L+D +T  V+    P+  + PASLTK++T Y       ++
Sbjct: 25  LFAVNLAEINKLSLHAKSIVLMDFDTKRVLYSKKPNLVFPPASLTKIVTIYTALIEAGKR 84

Query: 73  KAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
              L + + IS +AS Y           +KG  +  +  LK L + S ND ++AIAE + 
Sbjct: 85  NVKLKSIVPISDSASYYNAPLNSSLMFLEKGQIVNFEEILKGLSISSGNDASIAIAEFVV 144

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
                FV  MN    NLGL   HF+   G     +  TA DMA         F   ++  
Sbjct: 145 GDLNSFVNLMNINVMNLGLFNMHFVEPSGYSN-ENKITALDMAFFVKSYIEKFKFMLNIH 203

Query: 189 QIKGLEIKGK--------------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +K                     K  N N  +  +  +DG+KTG+   SG N+VA+A +
Sbjct: 204 SLKYFVYPKSKNLGTTLASKFLNLKQRNANLLIDDYPYSDGLKTGYIKESGLNLVATAQK 263

Query: 235 GDQSLIAVILGALDRNTRNKV------SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           GD+ LIAV+LG      R+        + +L   GF   +    I  + +  Y   +   
Sbjct: 264 GDRRLIAVVLGVEKGINRSGERMRALIAKNLFEYGFNEYSKFPLIVKLKEKVYNGIVDTV 323

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
                E       +       +    DK    +  +
Sbjct: 324 ALFSKEPFYYVFTKDEFNKLNISYTVDKLVAPLTGD 359


>gi|71902909|ref|YP_279712.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS6180]
 gi|71802004|gb|AAX71357.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS6180]
          Length = 410

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDTKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFDGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     +   +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSPEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|254228127|ref|ZP_04921557.1| beta-lactamase [Vibrio sp. Ex25]
 gi|151939623|gb|EDN58451.1| beta-lactamase [Vibrio sp. Ex25]
          Length = 249

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 74/229 (32%), Positives = 108/229 (47%), Gaps = 4/229 (1%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++       +  A       Y L+D +TG V+ E       NPASLTKLMTAYV    + 
Sbjct: 21  SLAYAAPTVVPNAPELSSRGYVLMDFHTGKVLVERDAHKRLNPASLTKLMTAYVAGQEIN 80

Query: 71  EKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                L   + IS+NA        S    +  ++++L +  + L+V+S ND +VAIAE +
Sbjct: 81  AGNITLDDEVVISRNAWAKNFPDSSKMFIEVNTSVSLSDLYRGLVVQSGNDASVAIAEHV 140

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             +E  FV  MN+ +  L L+ T F N HG+   G Y+T  D+A L   I  D P     
Sbjct: 141 AGSESGFVSLMNSWAAKLELNNTAFTNPHGLDSDGLYSTPYDIAKLGQAIIRDLPDIYPL 200

Query: 188 FQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           +        G    N N       +  DGMKTG+T  +G+++  SA QG
Sbjct: 201 YSETSFTYNGITQYNRNGLLRDRSMNVDGMKTGYTSGAGYSLATSATQG 249


>gi|229164337|ref|ZP_04292267.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
 gi|228619080|gb|EEK75976.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
          Length = 424

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLSLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           N+ G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 163 NSTGLNNADLKGKHPEGTDPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKIDKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKAPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           +++   DK            +K   + + + +
Sbjct: 343 KIETEADKSIAEDGHLVAPIKKDAKVGSIVLE 374


>gi|15594950|ref|NP_212739.1| serine-type D-Ala-D-Ala carboxypeptidase (dacA) [Borrelia
           burgdorferi B31]
 gi|2688537|gb|AAC66969.1| serine-type D-Ala-D-Ala carboxypeptidase (dacA) [Borrelia
           burgdorferi B31]
          Length = 405

 Score =  140 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLIDFDTKRILYSKKPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 100 YYNAPPNSSLMFLEKGQIVNFEEILKGLSVSSGNDSSIAIAEFVVGNLNSFVNLMNINVL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---------- 193
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSG-YSSENKITALDMAFFVKSYIEKFKFMLNIHSLKYFIYPKSRNLGT 218

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG---- 245
               +    K  N N  +  +  +DG+KTG+   SG N+VA+A +G++ LIAV+LG    
Sbjct: 219 ALSSKFLNLKQRNANLLIYDYPYSDGIKTGYIKESGLNLVATAKKGERRLIAVVLGVEKG 278

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R+ ++ +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGFGEKMRSSIAKNLFEYGFNKYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYILTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|229034027|ref|ZP_04188975.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228728290|gb|EEL79318.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 423

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 126/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNGENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ GADG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFSYEGADGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K     +      +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKHNTISVVKGKEDQVTVTPEKEITVIAKKGSKDPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPVKKDANVGSITLE 374


>gi|221218183|ref|ZP_03589649.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi 72a]
 gi|221192131|gb|EEE18352.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia burgdorferi 72a]
          Length = 405

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 79/321 (24%), Positives = 128/321 (39%), Gaps = 25/321 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L+D +T  ++    P+  + PASLTK++T Y      +++   L + + IS +AS
Sbjct: 40  AKSIVLMDFDTKRILYSKKPNLVFPPASLTKIVTIYTALIEAEKRNIKLKSIVPISDSAS 99

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            Y           +KG  +  +  LK L V S ND ++AIAE +      FV  MN    
Sbjct: 100 YYNALPNSSLMFLEKGQIVNFEEILKGLSVSSGNDSSIAIAEFVVGNLNSFVNLMNINVL 159

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---------- 193
           NLGL   HF+   G     +  TA DMA         F   ++   +K            
Sbjct: 160 NLGLFNMHFVEPSG-YSSENKITALDMAFFVKSYIEKFKFMLNIHSLKYFIYPKSRNLGT 218

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG---- 245
               +    K  N N  +  +  +DG+KTG+   SG N+VA+A +G++ LIAV+LG    
Sbjct: 219 ALSSKFLNLKQRNANLLIYDYPYSDGIKTGYIKESGLNLVATAKKGERRLIAVVLGVEKG 278

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                   R+ ++ +L   GF   +    I  + +  Y   +        E       + 
Sbjct: 279 INGFGEKMRSSIAKNLFEYGFNKYSKFPLIVKLKEKVYNGTVDTVALFSKEPFYYILTKD 338

Query: 304 INYNTQMKEAKDKESHFIDFE 324
                 +    DK    +  +
Sbjct: 339 EFDKINISYTVDKLVAPLSGD 359


>gi|227499916|ref|ZP_03930009.1| serine family D-Ala-D-Ala carboxypeptidase [Anaerococcus tetradius
           ATCC 35098]
 gi|227218025|gb|EEI83298.1| serine family D-Ala-D-Ala carboxypeptidase [Anaerococcus tetradius
           ATCC 35098]
          Length = 402

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 81/354 (22%), Positives = 148/354 (41%), Gaps = 24/354 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-------KLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           ++ ++I  + ++  + P    A           +  Y + +  TG V  E   D     A
Sbjct: 4   KKTMLISLLTLVFLLMPGEIFAAQTRVVGLDSNVSSYLIGNEETGDVYYEKNADEARPMA 63

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITIS---KNASEYPPSNSTFKKGSTMTLDNALKLL 111
           SLTKLMT  +V   ++E K  L T +      +  + +  S+   K+  + +++  L+ L
Sbjct: 64  SLTKLMTFLLVRDAIEEGKINLNTSVKADKKAEELTSWEYSSLGLKEKESYSVEELLQGL 123

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV---VQHGHYTTAR 168
           I  S ND A  +A+++  +E+KF   MN  +K LGLS+  + NA G+       + ++AR
Sbjct: 124 IAVSGNDCAYLLAKTVAGSEEKFATLMNEKAKELGLSSQKYYNASGIETKDNKENQSSAR 183

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGF 226
           D+  LS  I   +P  + Y  +  + I GK     +T        G DG+KTG T  +G+
Sbjct: 184 DLFKLSSFIVRKYPDILRYSTMDEVNIPGKGIRKTSTIPLRKDIKGVDGLKTGTTDKAGY 243

Query: 227 NIVASAIQ------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK--INYIIK 278
            +V +          D   I V++GA  ++TR  V + L+       + +K   +N  + 
Sbjct: 244 CLVTTVDMKELDGSDDFRCIGVVMGADQKDTRESVMSDLIYYISRFYSCKKVLDVNKSLD 303

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                +       +  +   +     +     K   +K       +K  +L   
Sbjct: 304 SIEVGSAKQGYIELYPKENLSIISNDDKKVATKITLNK-DIKAPIKKGDILGKV 356


>gi|170761736|ref|YP_001787179.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169408725|gb|ACA57136.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 378

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  +TL   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKITLRELLYGLMLRSGNDAAIAIAEGIAGSVEGFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNEIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYHNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTKGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGAL 339


>gi|225374872|ref|ZP_03752093.1| hypothetical protein ROSEINA2194_00495 [Roseburia inulinivorans DSM
           16841]
 gi|225213255|gb|EEG95609.1| hypothetical protein ROSEINA2194_00495 [Roseburia inulinivorans DSM
           16841]
          Length = 410

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 109/291 (37%), Gaps = 28/291 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPF-------LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           +++ +  I   ++   +P                     L+D  +G ++           
Sbjct: 11  LKRAISFIICLIILFTYPTKLMAAQEPPEEAELFAKAAVLMDGGSGRILYSKNGSEALAN 70

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK++T  +       ++        +S  A++ P  +     G    + + +  +++
Sbjct: 71  ASTTKILTCIIALENCDLEQIT-----EVSVQAAKAPKVHLGAPAGQKFRMKDLIYAMML 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARD 169
           +S ND AV IAE +  T + F + MN+ +K +G   T F+  +G+        H+TTA D
Sbjct: 126 ESFNDCAVVIAEQVAGTTEHFSKLMNDYAKKIGCKDTFFITPNGLDAQKDIQFHHTTAED 185

Query: 170 MAILSWRIKTDFPQYMHYFQIK---GLEIKG------KKYPNTNWAVGTFLGADGMKTGF 220
           +A +      + P+   + +I                    N N  +    GA   KTGF
Sbjct: 186 LAQIMRYCIKESPKADQFLKITGEAEYTFTDVSGKYAYHCYNHNAFLKMMDGAVSGKTGF 245

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTR---NKVSASLLSMGFYNKT 268
           T  +G+  V +  Q  ++ I  +L     N R      +  L+  G     
Sbjct: 246 TGNAGYCYVGALEQNGKTYIVALLACGWPNNRTYKWSDTRKLMEYGLAAYE 296


>gi|221632531|ref|YP_002521752.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermomicrobium roseum
           DSM 5159]
 gi|221157198|gb|ACM06325.1| serine-type D-Ala-D-Ala carboxypeptidase [Thermomicrobium roseum
           DSM 5159]
          Length = 549

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 16/273 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  L ++ +A+   I             ++ ++D  TG ++AE     P   ASLTK+MT
Sbjct: 7   RCVLGLLIVALAIPIPVRADSLPEVVAQHWIIMDAETGQIVAERAARQPVAIASLTKVMT 66

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A V        +  L  P+TI         S++  + G  +TL   L  L+++S ND A+
Sbjct: 67  AVVALE-----RGALDQPVTIVPE-DLIGESSAGLRAGQVVTLRTLLYGLLLRSGNDAAM 120

Query: 122 AIAESLCKTEKK--------FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           AIA ++  +           FV  MN  +  LGL AT F N HG+ + GH ++A D+A L
Sbjct: 121 AIARAVGGSPDAEDPAARQRFVTWMNAKAVELGLQATSFRNPHGLDEPGHVSSAYDLARL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +     D P ++  F       +G  + +TN     + G  G KTG+T  +G  ++  A 
Sbjct: 181 TRVALAD-PVFVEIFGAASYHGEGFSWRHTNRLPERYPGIIGGKTGWTDEAGLCLIEVAE 239

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  ++ I V+ G+         +A LL  G+  
Sbjct: 240 RAGKTAIVVLTGS-TLAAWYDDAAKLLDYGWTK 271


>gi|160943813|ref|ZP_02091044.1| hypothetical protein FAEPRAM212_01311 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444987|gb|EDP21990.1| hypothetical protein FAEPRAM212_01311 [Faecalibacterium prausnitzii
           M21/2]
          Length = 443

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 116/350 (33%), Gaps = 25/350 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----KLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++F   +   +L      +  A            Y ++D +TG V+A+   D   +PAS
Sbjct: 1   MKKFTAALCTVLLLIGAVLVPGAAAAGPALANTRAYCIMDADTGLVLAQQNMDEELHPAS 60

Query: 56  LTKLMTAYVVFS--FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           +TK+MT  +             LT       + +    S+   ++G  + L +AL    +
Sbjct: 61  ITKVMTLGLACEKAQGDWDDVKLTVTHEDVYSLAGTDSSHIALREGEEVPLVDALYATQM 120

Query: 114 KSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
            SAND A  +AE          V  MN   + LGL+ THF N HG+    HYT+  DMA 
Sbjct: 121 ASANDGANLLAEYFGGGTIADGVAAMNAQVEELGLAHTHFSNPHGISDEDHYTSCYDMAQ 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV------------GTFLGADGMKTGF 220
           +             + + +   ++                              G K G+
Sbjct: 181 ILRWALQQPGFEELFTRNEMYTMQPTNIQPVTRYFSQQDKIRIGSSRYHIDSVLGSKLGY 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK-----KINY 275
           T  + ++ V  A Q    LI   + +     +     +LL   F             +  
Sbjct: 241 TNTARYSYVCLAEQDGVRLICATMQSQLSTDKYNDMRTLLDYAFSTYKSYTQLPGGTVTA 300

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            +           V      V     E ++      + +  E + +  E 
Sbjct: 301 QLAVAGGGQSLGTVTVADPGVKLLLAEGLSAQDVTVDLELPEQYLLGAEP 350


>gi|325108452|ref|YP_004269520.1| serine-type D-Ala-D-Ala carboxypeptidase [Planctomyces brasiliensis
           DSM 5305]
 gi|324968720|gb|ADY59498.1| Serine-type D-Ala-D-Ala carboxypeptidase [Planctomyces brasiliensis
           DSM 5305]
          Length = 302

 Score =  139 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 27/287 (9%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+ F   +++  +++       +               +T +D  TG +I  +       
Sbjct: 1   MKWFSFCLLSFLIIAPALAEDVVLLERYDGPPAVTCEAWTAIDAETGEMIVSHKAGEVLR 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PAS TK+MT+Y+VF+   E   ++   +T S+ A +   S+ST ++G  +++   L  L+
Sbjct: 61  PASTTKIMTSYLVFNLAAESPEVMEELVTFSRRADKTGGSSSTVREGEQVSVRELLYGLL 120

Query: 113 VKSANDIAVAIAESLCKT---------EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           + S ND +VA+AE               ++FV  MN  +  LG++ TH+ N HG+    H
Sbjct: 121 LPSGNDASVALAEHFGDRLSPEGEGTAYERFVAAMNRQAAELGMNDTHYENTHGLDNVKH 180

Query: 164 YTTARDMAILSWRIKT--------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
            TTA DMA L+                +Y      +  E +  ++ NTN  +    G  G
Sbjct: 181 VTTAADMARLAQAAMQIPDFRKVVRTAEYRTAVTQEDGEQRVLEWRNTNKLLPY--GYLG 238

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +KTG+T  +G  +V+ + +  + LI V+L +  R++R   S +L   
Sbjct: 239 VKTGWTTMAGACLVSCSQRDGRELILVVLKSSCRDSRFTDSRNLWRW 285


>gi|331700972|ref|YP_004397931.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128315|gb|AEB72868.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus buchneri
           NRRL B-30929]
          Length = 421

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 138/365 (37%), Gaps = 41/365 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  ++ ++M  +    ++            +D ++G ++ +   + P   AS++KLMT Y
Sbjct: 14  FFCVLTLSMTVDAKSTVTPEPAIYAKSAIAVDADSGQILYQKNANQPRAIASISKLMTVY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDI 119
           +V   ++  K      + IS   ++   ++       T     +++ L+     +SAN  
Sbjct: 74  IVHQQIRANKLAWDDKVKISSELAKLSTASGLTNVPLTAGKAYSVRQLVNATLVESANAA 133

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------GHYT 165
           A+A+ + +  T  KF   MN T++ +G+S  HF NA G+                  +  
Sbjct: 134 ALALGQKVAGTATKFAALMNKTARKIGISDGHFYNASGLTNKLTGKLALSHVSANAENLL 193

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-----GADGMKTGF 220
           +A+D+A+L+ ++   FP+  +  +       G      N  +           DG+KTG 
Sbjct: 194 SAKDVALLAQKLLQKFPKVTNITEQTTSTFYGTTMTGHNQLIDDHNLGQGVRVDGLKTGT 253

Query: 221 TCASGFNIVASAIQGD-QSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINY 275
           +  +G   V SA       +I V+LGA +++     R   +A L+          + I  
Sbjct: 254 SDKAGACFVGSATTNGKHRIITVVLGARNKSANDPARFIQTAKLMKWV---YATHQPIKL 310

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE----------SHFIDFEK 325
                       ++P+  +       +  ++    K    K+                +K
Sbjct: 311 AAGATIAGVDKAKIPDGKQTTILPVTKATHWAWADKGTSAKQISGQYVNQPAKLTSPTKK 370

Query: 326 ITLLK 330
            T + 
Sbjct: 371 GTQVG 375


>gi|313891603|ref|ZP_07825210.1| serine-type D-Ala-D-Ala carboxypeptidase [Dialister microaerophilus
           UPII 345-E]
 gi|313119881|gb|EFR43066.1| serine-type D-Ala-D-Ala carboxypeptidase [Dialister microaerophilus
           UPII 345-E]
          Length = 323

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 13/278 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             V+I +       P + +          + D NTG  +     +    PAS TK++T  
Sbjct: 34  IAVLIKITPPPPQKPQMKVLPQVDAVSVAIADGNTGKFLGGKDSELRVYPASTTKILTCI 93

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +           L     I+ NA++   +    K    ++L   L  +++ S ND AV++
Sbjct: 94  IALEE---GHDKLNDNALITPNATKQDGTCLGLKPDLPISLQELLYGMMLVSGNDAAVSV 150

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP- 182
           AE++    + F++ MN  +KN+G   ++F+NA+G+    HYTTA DMA ++     +   
Sbjct: 151 AETVSGNYETFIKLMNAKAKNIGAVNSNFVNANGLTDKNHYTTASDMAKIAVYAMKNQNF 210

Query: 183 -----QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                +  H    +   I+  +  N     G + GA+G+KTG T A+G  +VASA +   
Sbjct: 211 RKIVKEPFHMMTYRDGTIRRIENRNEFLESG-YEGANGIKTGMTEAAGDCLVASAERDGH 269

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
            ++  I        R +    LL  GF    + +    
Sbjct: 270 LVVVSIYN---DENRWEDVKKLLDYGFDAIKNEEMYEK 304


>gi|262402708|ref|ZP_06079269.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC586]
 gi|262351490|gb|EEZ00623.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC586]
          Length = 317

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 9/280 (3%)

Query: 64  VVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++   +K     L   + ISKNA        S    + G+T+ + +  + +I++S ND  
Sbjct: 1   MIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDAC 60

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T  D+A+L   +  D
Sbjct: 61  VAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDNPDLYSTPYDLALLGQALIRD 120

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            P+    +  +     G    N N       +  DG+KTG T  +G+N+V+SA +G+  L
Sbjct: 121 VPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRL 180

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           +AV++G  + N R   S  LLS GF                 +  +  +       + ++
Sbjct: 181 VAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIWMGDKDTIALGVDKD 240

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              T       +       +KE      +K  ++     +
Sbjct: 241 TYVTLPRGQAKDLTASFVLEKE-LKAPLKKGDVVGTLYYQ 279


>gi|325957359|ref|YP_004292771.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus acidophilus
           30SC]
 gi|325333924|gb|ADZ07832.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus acidophilus
           30SC]
          Length = 432

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 71/377 (18%), Positives = 132/377 (35%), Gaps = 53/377 (14%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL----------PYYTLLDTNTGHVIAENYPDHPWNP 53
           F+  I++     +F     A+                   +D+++G ++     D     
Sbjct: 14  FVAAISLISCGAVFTTPVHADATSSYQADQLNLNVKSAIAIDSDSGQILYAKNADKTLPI 73

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALK 109
           AS+TKL+T Y+    +K KK      +     I K A+    SN   K G + T+    +
Sbjct: 74  ASMTKLVTVYLTLQAIKNKKLSWDQKVKPTAPIVKVANNTEYSNVPLKMGHSYTIRQLYQ 133

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
             +++SAN  A+ + +++  ++K F+  M    K  G+       A G+           
Sbjct: 134 ATLIESANGAAMLLGQTIAGSQKAFINQMRAQVKKWGIEDAKIYTACGLPNGNLGKDAYP 193

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG----KKYPNTNWA----- 206
                  +  +A+DMAI+   +  DFP+ +   +I  L  K      K  N NW      
Sbjct: 194 GVNKNDENTMSAKDMAIIGQNLIKDFPEVLDTTKIAHLNFKDGNKVTKMANFNWMLKGLS 253

Query: 207 --VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLL 260
                +   DG+KTG T A+G   + +       LI V++GA        +R   +  L+
Sbjct: 254 QYDEAYP-VDGLKTGTTDAAGACFIGTVEHSGARLITVVMGARHQDGTDPSRFIQTKKLM 312

Query: 261 SMGFYNKTDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           +  F                         + +     +   +             +  + 
Sbjct: 313 NFIFNKYRPITMTAGSQMNGAKSIKVTDGDNATTNLGLKNRITIWDPADDK---TLVASL 369

Query: 315 DKESHFIDFEKITLLKN 331
           DK++      K   + N
Sbjct: 370 DKKTVEAPITKDQTIGN 386


>gi|160882047|ref|YP_001561015.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
 gi|160430713|gb|ABX44276.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
          Length = 516

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 64/306 (20%), Positives = 122/306 (39%), Gaps = 20/306 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                         +++ +TG ++ E        PAS+TK++T  +           L  
Sbjct: 49  TWPTGPEVYADAAIVMEASTGLILYEKDIYDKHYPASITKILTTLLAIENC-----NLNE 103

Query: 79  PITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-F 134
            +T+S  A     +  S     +G +++L +AL  ++++SAN+++  + E + K     F
Sbjct: 104 TMTMSHAAEWDVDFNSSRIGLVEGESLSLKDALYAVMLESANEVSFGVGEHVAKGSMTDF 163

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
              MN  +K LG   ++F+N +G+    HYT A DMA++S       P++      +   
Sbjct: 164 TAMMNARAKELGCVNSNFVNPNGLHDDNHYTCAYDMALISRAAIM-LPEFRTITGTRTYT 222

Query: 195 IKGK---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
           I             +         + GA G KTG T  +   +V  A +   +LIAV+L 
Sbjct: 223 IPATNKNVARPLANHHRFIRKTSNYDGAIGGKTGGTTEAKTTLVTYAERNGLTLIAVVLH 282

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKIN-YIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
                   + +A +L   F N    +  +   + +    +L  + P   +   +  +   
Sbjct: 283 VDTGLHAYEDTAKILDFAFDNYALYRIEDTEGVNNSAFTSLFKDFPAFVKPDQSPLRLSS 342

Query: 305 NYNTQM 310
           N N  +
Sbjct: 343 NSNVVL 348


>gi|328958772|ref|YP_004376158.1| D-alanyl-D-alanine carboxypeptidase DacA [Carnobacterium sp. 17-4]
 gi|328675096|gb|AEB31142.1| D-alanyl-D-alanine carboxypeptidase DacA [Carnobacterium sp. 17-4]
          Length = 439

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 128/389 (32%), Gaps = 58/389 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDT-------------NTGHVIAENYP 47
           M++   I  + +   +    S    +       ++               TG V+     
Sbjct: 1   MKKSAKISTLFVTMLLLGTFSPLMASTTVSAATIEQPAIEAAAAFAIEPTTGKVLLNQNG 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMT 103
           D     AS+TK++T Y++   +K         + IS+ A     +            T +
Sbjct: 61  DEKLGIASMTKMITEYILLETIKNGDLAWDDQVNISEYAHNISQNYELSNVPLRIDDTYS 120

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---- 159
           ++   + + + SAN   +A+AE +   EK FV  M+   ++ G++     N  G+     
Sbjct: 121 VEELYQAMAIYSANGATIALAEHIAGDEKSFVDMMHEKVESWGITNYELYNTTGLSNSDL 180

Query: 160 ----------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTN 204
                        +  TAR+M+I++ R+  DFP+ +    I   + +          N N
Sbjct: 181 QGNIYPGSTEDSENSMTAREMSIVAQRLLVDFPEVLKTSSISEKKFREGTSDEISMQNFN 240

Query: 205 WA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVS 256
           W     +      DG+KTG T  +G ++  +A +    +I +++ A +       R   +
Sbjct: 241 WMLPGLIYERENVDGLKTGTTDFAGASMTGTAEEEGMRVITIVMNATNGQENLSKRFAET 300

Query: 257 ASLLSMGFYNKTDRKKINYIIK-------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             ++   F N                      +         +  +V        +    
Sbjct: 301 DKIMDWAFENWDMVPVFKEGQTLEDVEPLAVDKGKEDTLNVAVQSDVSLLVPTNADSEKT 360

Query: 310 MKEAKDKES-------HFIDFEKITLLKN 331
               + K+             +K T +  
Sbjct: 361 TATVQVKKDLLNEAGNLTAPIKKGTEVGT 389


>gi|295104040|emb|CBL01584.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 443

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 116/350 (33%), Gaps = 25/350 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----KLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++F   +   +L      +  A            Y ++D +TG V+A+   D   +PAS
Sbjct: 1   MKKFTAALCTVLLLIGAVLVPGAAAAGPALANTRAYCIMDADTGLVLAQQNMDEELHPAS 60

Query: 56  LTKLMTAYVVFS--FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           +TK+MT  +             LT       + +    S+   ++G  + L +AL    +
Sbjct: 61  ITKVMTLGLACEKAQGDWDDVKLTVTHEDVYSLAGTDSSHIALREGEEVPLVDALYATQM 120

Query: 114 KSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
            SAND A  +AE          V  MN   + LGL+ THF N HG+    HYT+  DMA 
Sbjct: 121 ASANDGANLLAEYFGGGTIADGVAAMNAQVEELGLAHTHFSNPHGISDDDHYTSCYDMAQ 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV------------GTFLGADGMKTGF 220
           +             + + +   ++                              G K G+
Sbjct: 181 ILRWALQQPGFEDLFTRNEMYTMQPTNIQPVTRYFSQQDKIRIGSSRYHIDSVLGSKLGY 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK-----KINY 275
           T  + ++ V  A Q    LI   + +     +     +LL   F             +  
Sbjct: 241 TNTARYSYVCLAEQDGVRLICATMQSQLSTDKYNDMRTLLDYAFSTYKSYTQLPGGTVTA 300

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            +           V      V     E ++      + +  E + +  E 
Sbjct: 301 QLAVAGGGQSLGTVTVADPGVKLLLAEGLSAQDVTVDLELPEQYLLGAEP 350


>gi|229176064|ref|ZP_04303558.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
 gi|228607408|gb|EEK64736.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
          Length = 423

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 127/332 (38%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYYSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNGENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFSYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N I     +++    VP     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTISVVKGKEDQVTVVPEKEITVIAKKGSKDPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|294794892|ref|ZP_06760027.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella sp. 3_1_44]
 gi|294454254|gb|EFG22628.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella sp. 3_1_44]
          Length = 300

 Score =  138 bits (348), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 11/258 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S          +       L+D +T  ++    PD   +PAS TK++T          K
Sbjct: 44  ASVAQAAYITPPSTVGEAVVLIDADTKEILFAKNPDKWMHPASTTKMVTLLTALEL---K 100

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L    TIS  A+    SN   + G  +TL+  L+ ++V S ND AV +AE++  +  
Sbjct: 101 GTQLDELATISSYATSMEESNLGVRVGDQITLEGVLEGMMVASGNDAAVVVAENVSGSVD 160

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYF 188
           KF + M   +   G   + F+N HG+ Q GH++TARD+A++                 Y+
Sbjct: 161 KFAKDMTRIAAKAGAKNSVFLNPHGLTQKGHHSTARDLAMIAAYGMKYQMFRDKVANDYY 220

Query: 189 QIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           ++       +    TN  +   + GA+G+KTGFT A+G  ++ASA +   ++I V+L   
Sbjct: 221 KVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIASATRNGHTMIVVMLN-- 278

Query: 248 DRNTRNKVSASLLSMGFY 265
             + R   +   L  GF 
Sbjct: 279 -DDNRWDEAVQFLDYGFK 295


>gi|295425352|ref|ZP_06818055.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus
           amylolyticus DSM 11664]
 gi|295065128|gb|EFG56033.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus
           amylolyticus DSM 11664]
          Length = 432

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 74/352 (21%), Positives = 136/352 (38%), Gaps = 35/352 (9%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S I  +        +     +D+ TG ++     D     AS+TKL+T Y+    +K K
Sbjct: 33  SSTISSYRQDELNLNVKSALAIDSKTGQILYAKNADKTLPIASMTKLVTVYLTLQAIKNK 92

Query: 73  KAMLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +   TT +     I K A+    SN   KKG + T+    +  +++SAN  A+ +A+++ 
Sbjct: 93  QISWTTKVKPTATIVKVANNSEYSNVPLKKGHSYTIKQLYQATLIESANGAAMCLAQAVS 152

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILS 174
            ++  FV+ M    K  G++        G+                  +  +A+DMAI+ 
Sbjct: 153 GSQVAFVKKMRAQVKKWGINDAKIYTVCGLPNGNLGSDAYPGVSKNAENTMSAKDMAIIG 212

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGK----KYPNTNWA------VGTFLGADGMKTGFTCAS 224
            R+  DFP  +    I  L  K +    +  N NW           L  DG+KTG T A+
Sbjct: 213 QRLINDFPAVLKTTSIAKLAFKDQGKTTQMENFNWMLKGLSQYDANLKVDGLKTGTTDAA 272

Query: 225 GFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           G   + +  +    +I V++GA        +R   +  L++  F   T          + 
Sbjct: 273 GACFIGTIKKNGSRIITVVMGARHQDGTDPSRFVQTKKLMNWIFSKYTPVIMNAGTTFNQ 332

Query: 281 YQQNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLL 329
            +     +   ++  V    K  I      +++  +  K++      K   +
Sbjct: 333 AKAVSVTDGDQLTTNVGLKSKTTIWDPVDGSKISASLTKKTVNAPVTKGQTV 384


>gi|160946179|ref|ZP_02093390.1| hypothetical protein PEPMIC_00141 [Parvimonas micra ATCC 33270]
 gi|158447702|gb|EDP24697.1| hypothetical protein PEPMIC_00141 [Parvimonas micra ATCC 33270]
          Length = 391

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 85/340 (25%), Positives = 145/340 (42%), Gaps = 8/340 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +I ++  +     +       K     + D  +G +      D P + AS++KLMT Y
Sbjct: 10  LALIFSICFVGTAKSYAIFGIEKKTTASLIGDAKSGALFVAENIDEPLSIASISKLMTYY 69

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   + E K  +   + IS NAS    S+   K G  +++ + L  L+V S ND AVA+
Sbjct: 70  LVKEKIAEGKLKMEDKVKISINASREEGSSLNLKAGEQISIKDLLDGLMVVSGNDSAVAL 129

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDF 181
           AE + ++E KFV  MN  +K LGL    F NA G+ ++G     + RD+  LS  I   +
Sbjct: 130 AEVVAESESKFVTMMNEKAKELGLQNATFTNASGLTKNGQDNKMSTRDIFTLSKAIIEKY 189

Query: 182 PQYMHYFQIKGLEI--KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-- 237
           P+ + Y +   LE   +  K  +T   VG   G DG+KTG T  +G+ +V++        
Sbjct: 190 PEVLEYAKTTVLEQPSRNFKKESTIPLVGQVEGVDGLKTGHTDEAGYCLVSTMKIKKGET 249

Query: 238 --SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
              +I+V++GA  +  R +    +L+    N   RK ++        +  S     I   
Sbjct: 250 EFRVISVLMGAKTKADRAQYMKDMLNYAKQNIETRKIVDSEKFVKKVETKSASQGFIELV 309

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                +         +     +   +  +K   +     K
Sbjct: 310 PKENLERASMKGINYETEVTVDDVKLPLKKGDKVGEIKIK 349


>gi|296278518|pdb|3MFD|A Chain A, The Structure Of The Beta-Lactamase Superfamily Domain Of
           D- Alanine Carboxypeptidase From Bacillus Subtilis
 gi|296278519|pdb|3MFD|B Chain B, The Structure Of The Beta-Lactamase Superfamily Domain Of
           D- Alanine Carboxypeptidase From Bacillus Subtilis
          Length = 334

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 63/312 (20%), Positives = 111/312 (35%), Gaps = 13/312 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            + A         ++D  +G V+           AS+TK+ TA +     K         
Sbjct: 1   SNAAIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIXTAVLAIESGKX-----DQT 55

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T+S NA     S     +G  + L + +  L ++S ND AVAIAE +  +   FV   N
Sbjct: 56  VTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLXLRSGNDAAVAIAEHVGGSLDGFVYXXN 115

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG   T F N HG+  H ++ +      +  +       Y      K  + +  +
Sbjct: 116 QKAEQLGXKNTRFQNPHGLDDHENHYSTAYDXAILTKYAXKLKDYQKISGTKIYKAETXE 175

Query: 200 YPNTNWAV---GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
               N        +  + G KTG+T  +   +V++A +    LIAV +   +        
Sbjct: 176 SVWKNKNKLLTXLYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDPND---WDDH 232

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC--TTQKEIINYNTQMKEAK 314
               +  F +               +         I  ++    T++E  N        K
Sbjct: 233 XKXFNYVFEHYQTYLIAKKGDIPKLKGTFYESKAFIKRDITYLLTEEEKENVKINTTLLK 292

Query: 315 DKESHFIDFEKI 326
            K++   D  KI
Sbjct: 293 PKKAWEKDASKI 304


>gi|291614764|ref|YP_003524921.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sideroxydans
           lithotrophicus ES-1]
 gi|291584876|gb|ADE12534.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sideroxydans
           lithotrophicus ES-1]
          Length = 268

 Score =  138 bits (348), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 15/272 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR+ L I    + + +    +      ++    L++ N G  I    PD    PASLTKL
Sbjct: 1   MRKALFIGLWLLANTVQATTAQPDPFPEVATAYLVELN-GKAIWAKQPDRRLPPASLTKL 59

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA +V    +         +T++ +A+    +    K G    + + L   ++ SAND 
Sbjct: 60  MTALLVLERTR-----PDDIVTVTPSATHETGTRIGLKTGERFHVQDLLAAALLPSANDA 114

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI-----LS 174
             A+A+ L   E  FV  MN  +  LG+  THF NA G  +  HY++A+D++I     L 
Sbjct: 115 CQALADHLDGDETGFVARMNQRAHELGMRNTHFANACGHDKARHYSSAKDLSILAHALLK 174

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
           +    D                     + N  +G + GA G+KTG+T  +G  +VA A +
Sbjct: 175 YPSLLDVTSQRKLQIATLDGQHRYILESKNALIGRYDGAIGIKTGYTPNAGKCLVAYAKR 234

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
              +++ ++L   D   R   +  +L + F +
Sbjct: 235 DGNAVLFIMLHGHD---RWWDAVDVLDLAFDH 263


>gi|227892889|ref|ZP_04010694.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus ultunensis DSM
           16047]
 gi|227865295|gb|EEJ72716.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus ultunensis DSM
           16047]
          Length = 432

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 137/374 (36%), Gaps = 47/374 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL----------PYYTLLDTNTGHVIAENYPDHPWNP 53
            + +I++A     F     A+                   +D+N+G ++     D     
Sbjct: 14  LVAVISLASCGVAFTTPVHADATSSYHADQLNLDVKSAIAIDSNSGQILYAKNADKTLPI 73

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALK 109
           AS+TKL+T Y+    +K KK      +     I K A+    SN   K G + T+    +
Sbjct: 74  ASMTKLVTVYLTLQAIKNKKLSWDQKVKPTAPIVKVANNTEYSNVPLKMGHSYTIKQLYQ 133

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
             +++SAN  A+ + +++  ++K F+  M    K  G+       A G+           
Sbjct: 134 ATLIESANGAAMLLGQTIAGSQKAFIDQMRQQVKKWGIEDAKIYTACGLPNGNLGKDAYP 193

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----KYPNTNWA----- 206
                  +  +A+DMAI+   +  DFP+ ++  ++  L+ K      K  N NW      
Sbjct: 194 GINKNAENTMSAKDMAIIGQNLIKDFPEVLNTTKLAHLDFKDNGKTTKMANFNWMLKGLS 253

Query: 207 --VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLL 260
                +   DG+KTG T A+G   + +       LI V++GA        +R   +  L+
Sbjct: 254 QYDKAYP-VDGLKTGTTDAAGACFIGTVEHSGARLITVVMGARHRDGTDPSRFIQTKKLM 312

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKE 317
           +  F              +  +     +  N +  +    K  I        +    DK+
Sbjct: 313 NFIFNQYRPITMTAGSQMNGAKTIEVTDGDNATTNLGLKNKTTIWDPADGKTLVAKLDKK 372

Query: 318 SHFIDFEKITLLKN 331
           S      K   + +
Sbjct: 373 SIEAPIVKDQTVGD 386


>gi|213582478|ref|ZP_03364304.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 242

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 14/234 (5%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A 
Sbjct: 125 RGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFT 221
           D+A+LS  I    P++ H +  K L   G    N N       +  DG+KTG T
Sbjct: 185 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHT 238


>gi|229826630|ref|ZP_04452699.1| hypothetical protein GCWU000182_02006 [Abiotrophia defectiva ATCC
           49176]
 gi|229789500|gb|EEP25614.1| hypothetical protein GCWU000182_02006 [Abiotrophia defectiva ATCC
           49176]
          Length = 478

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 110/292 (37%), Gaps = 30/292 (10%)

Query: 2   RQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           R F   + + +L ++                  + K     ++D  TG ++     +  W
Sbjct: 24  RSFAFFLMIMVLFSVLKINTVFAADSALWPECPSIKAKEAVVMDLATGTILVSKNGNKKW 83

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNAL 108
            PAS TK+MTA +     K     L   +  +K A    +   S+     G  +TL   L
Sbjct: 84  YPASTTKIMTAMLAIEHAK----SLDEEVEFTKEAIDAADRGSSSIGITPGEKLTLRECL 139

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             L++ SAN++A A+A     +   F   MN  +  LG + THF N  G+ +  HYTT  
Sbjct: 140 YGLMLASANEVANALAIHTAGSIDAFADMMNEKAAELGCTNTHFRNPSGLYEDDHYTTPA 199

Query: 169 DMAILSWRIKTDFPQ------------YMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADG 215
           D+A ++                       +  + K       +  N        +     
Sbjct: 200 DLAKIARAAIKIDAFKEIASTRKYVLPKTNLMKEKRPLSNTHQLFNPMQCPEHAYEYCYA 259

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
            KTG+T  + FN+V+   +G   ++ VI+ A  R+ +   +  L    F   
Sbjct: 260 GKTGYTREAKFNLVSYVKKGAMDVVCVIMNAESRDVQYTNTKKLTDYTFKRF 311


>gi|168184273|ref|ZP_02618937.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|237794758|ref|YP_002862310.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|182672602|gb|EDT84563.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|229261502|gb|ACQ52535.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 424

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 135/339 (39%), Gaps = 15/339 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I    + SN+F      +   T        +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFIFTLTSNVFAAGDSNTEPPTIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND+A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPQYSLNINLHPIDIGETIKAENVMDGLLLFSGNDVAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   MN   + L L  THF+  +G+    HYTTA D++++S     + 
Sbjct: 131 MIGDALAGNNKNFENMMNKKIQELNLKNTHFVTPNGLHNPNHYTTAYDLSVISRAALKNP 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       NTN  +G   G    KTG+T A+G  +V    +  +
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMTIENTNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDGR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ +++G+      +   +    ++   +  K     +K  +   +      L    P+
Sbjct: 250 KILGIVMGSVYDAKDSFVFEDMKKIIDWSYNAKPSTLYKKDSSLKTETVTYNPLKIIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFEKITLL 329
           ++ +V    KE +  Y  ++ + +  ++  ID      L
Sbjct: 310 VTIDVPIILKEDVTYYKNEVNDKESNKTINIDNTSYAAL 348


>gi|312978130|ref|ZP_07789875.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus crispatus
           CTV-05]
 gi|310895105|gb|EFQ44174.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus crispatus
           CTV-05]
          Length = 433

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 131/352 (37%), Gaps = 35/352 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+++G ++           AS+TKL+T Y+    +K  K 
Sbjct: 36  TTSSYQADQVKLNVKSAIAIDSDSGQILYAKNATKTLPIASMTKLVTVYLTLQAIKNHKL 95

Query: 75  MLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 96  SWDQKVKPTAPIVKVANNAEYSNVPLKLGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 155

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +K F+  M    K  G+       A G+                  +  +A+DMAI+  +
Sbjct: 156 QKAFIDQMRAQVKKWGIEDAKIYTACGLPNGNLGKDAYPGVNKNAENTMSAKDMAIVGQK 215

Query: 177 IKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVG---TFLG---ADGMKTGFTCASGF 226
           + + FP+ +   ++  L         K  N NW +     +      DG+KTG T A+G 
Sbjct: 216 LISAFPEVLETTRLAHLNFKDAGHVTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGA 275

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             + +       L+ V++GA         R + +  L++  F              +  +
Sbjct: 276 CFIGTVQHNGARLLTVVMGARHRDGTDPARFEQTKKLMNYVFTKYRPVTMTAGSQMNGAK 335

Query: 283 QNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLLKN 331
                +  N +  +   QK  I        +  + +K+S     +K   + +
Sbjct: 336 TIKVVDGDNATTNLGLKQKTTIWDPADGKTLVASLNKKSVEAPIKKDQTVGD 387


>gi|317132474|ref|YP_004091788.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ethanoligenens
           harbinense YUAN-3]
 gi|315470453|gb|ADU27057.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ethanoligenens
           harbinense YUAN-3]
          Length = 371

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 18/267 (6%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S      S A         + D +TG +  +    +   PAS+TK++TA V        
Sbjct: 35  ASAGAADTSGAPALACATGLVADADTGQIYYQKDMHNRMYPASITKILTALVSVEN---- 90

Query: 73  KAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
               +  IT+ ++ ++   S   N     G T+T++     + + SAND A+AIA+ +  
Sbjct: 91  -GDPSDVITVPQDVTQAQGSSVANIALVPGDTITMEQLEYTMFLASANDSAIAIADHIGG 149

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY-- 187
           +   FV  MN  +  LG   +HF   +G+    +YT+A DMA+++     +     ++  
Sbjct: 150 SVSGFVDMMNQKATALGAKDSHFSTPNGLPDPNNYTSAYDMALITRAAAQNPTLMRYFSA 209

Query: 188 -------FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSL 239
                    ++                  +    +  KTG+   SG  +V  A +  ++L
Sbjct: 210 RSFTLPVSALRKGAQSFTTLHKMMKKTAYYDADVEAGKTGWETMSGNTLVTVAQKNGRTL 269

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYN 266
           IAV+L   +       +  LL   F  
Sbjct: 270 IAVVLDGANSEAIYGDTRHLLDYAFAQ 296


>gi|315038949|ref|YP_004032517.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus amylovorus GRL
           1112]
 gi|312277082|gb|ADQ59722.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus amylovorus GRL
           1112]
 gi|327184084|gb|AEA32531.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus amylovorus GRL
           1118]
          Length = 432

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 137/374 (36%), Gaps = 47/374 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL----------PYYTLLDTNTGHVIAENYPDHPWNP 53
           F+  I++     +F     A+                   +D+++G ++     D     
Sbjct: 14  FVAAISLISCGAVFTTPVHADATSSYQADQLNLNVKSAIAIDSDSGQILYAKNADKTLPI 73

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALK 109
           AS+TKL+T Y+    +K KK      +     I K A+    SN   K G + T+    +
Sbjct: 74  ASMTKLVTVYLTLQAIKNKKLSWDQKVKPTAPIVKVANNTEYSNVPLKMGHSYTIRQLYQ 133

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------- 162
             +++SAN  A+ + +++  ++K F+  M    K  G+       A G+           
Sbjct: 134 ATLIESANGAAMLLGQTIAGSQKAFINQMRAQVKKWGIEDAKIYTACGLPNGNLGKDAYP 193

Query: 163 -------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG----KKYPNTNWA----- 206
                  +  +A+DMAI+   +  DFP+ +   +I  L  K      K  N NW      
Sbjct: 194 GVNKNDENTMSAKDMAIIGQNLIKDFPEVLDTTKIAHLNFKDGNKVTKMANFNWMLKGLS 253

Query: 207 --VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLL 260
                +   DG+KTG T A+G   + +       LI V++GA        +R   +  L+
Sbjct: 254 QYDEAYP-VDGLKTGTTDAAGACFIGTVEHSGARLITVVMGARHQDGTDPSRFIQTKKLM 312

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKE 317
           +  F              +  +     +  N +  +    +  I     +  +  + DK+
Sbjct: 313 NFIFDKYRPITMTAGSQMNGAKSIKVTDGDNATTNLGLKNRTTIWDPADDKTLVASLDKK 372

Query: 318 SHFIDFEKITLLKN 331
           +      K   + N
Sbjct: 373 TVEAPITKDQTIGN 386


>gi|47570219|ref|ZP_00240872.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
 gi|47553125|gb|EAL11523.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
          Length = 338

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 72/281 (25%), Positives = 129/281 (45%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L+D ++G V+ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILIDAHSGEVVYKKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E    L   + IS        S          T+ + +  L++   
Sbjct: 64  SKLMTEYITLEQLNEGTIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLIHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F Q MN  +K+L    ++ F+NA G+    +    TTA ++A 
Sbjct: 124 NRSALALAEHIAGNEDNFTQLMNKKAKHLKLSQSSPFLNATGMNNDTNKLSTTTATEVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++       K  K  NTN  +          G DG++T F+   
Sbjct: 184 LATQLVTDFPDVLNVTKLTSYQFTFKNTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSNNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAKRGDTRLISVILDAENENSTFIETKKLLQYGFD 284


>gi|291524141|emb|CBK89728.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale DSM 17629]
          Length = 465

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 111/326 (34%), Gaps = 24/326 (7%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            +         P   +++ NTG V+ E        PAS+TK++T Y+     K  + +  
Sbjct: 24  TYWPEGPQINSPCAVVMEVNTGTVLYEKNSHEKHYPASITKILTTYLTILNCKMDEKVTF 83

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +   + +++           +  TM       +     + A   A    + L      F+
Sbjct: 84  SKEAVKESSDGSSSIKRDVGEEMTMEQTLYGVMLESANECAYAAAEHTGKKLGGDYSTFI 143

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--------------F 181
             MN  +K LG + THF NA+G+    H+T+A DM ++S     +               
Sbjct: 144 DMMNKEAKELGCTDTHFNNANGLPDENHWTSAYDMGLISCAAYRNDEFRKITGTKTYIIP 203

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P   H             +P  +++        G KTG+T  +   +V  A +   +L A
Sbjct: 204 PTNKHTEDTPLYNHHAMLHPFKSYSQFVNHDCTGGKTGYTSVANSTLVTYAEKDGLTLCA 263

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKIN-------YIIKDFYQQNLSNEVPNISE 294
           VI+ A   +     + +LL+  F N                   D    N       +SE
Sbjct: 264 VIMNAQSPDQ-YADTNTLLNYYFSNFKALSIAENENSAATDNTPDLGVMNEHGMYAKVSE 322

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHF 320
                       + + + A  K  + 
Sbjct: 323 NYVVLPNNADFSSVKREAADMKSDNK 348


>gi|253579887|ref|ZP_04857155.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848886|gb|EES76848.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 472

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 109/275 (39%), Gaps = 14/275 (5%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            +++N       A         +++T+T  V+     D P  PAS  K+MT  V      
Sbjct: 95  VVVTNGIDGWPQASDISSAAAIVMETSTNTVLYSKNADQPLYPASAVKIMTCLVALENSS 154

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             + +  T   +S        +N + +     T++  L  ++V SANDIA+ +AE +  +
Sbjct: 155 LDEQVTMTATGVS--GVTDGGANISSQLDEVFTMEQCLYAIMVASANDIALQVAEHVGGS 212

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FVQ MN  ++ LG + T F N  G+     + TA DMA++      +          
Sbjct: 213 VDAFVQTMNTRAQELGCTNTVFTNPTGLPDENQHITAHDMALIMEAAMANDTFRTIAATT 272

Query: 191 ------KGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                   +    +   N          G +    G K G+T ASG  +V  A + +  L
Sbjct: 273 SYTLPATNVSGGERVLTNNFTMINSTSDGYYKPCIGGKEGYTEASGSTLVCEASKNNMKL 332

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           + ++L      T +  + +LL+ GF N       +
Sbjct: 333 VCIVLNGASGVT-DDEAIALLNYGFDNFAPLTIAD 366


>gi|228969874|ref|ZP_04130604.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228789827|gb|EEM37679.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 374

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/318 (20%), Positives = 116/318 (36%), Gaps = 34/318 (10%)

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDN 106
              AS+TK+M+ Y+V   + + K      + IS+ A +     S          + T+  
Sbjct: 1   MAIASMTKMMSEYLVHEAVDKGKLKWDQKVKISEYAHKISQDRSLSNVPLENGGSYTVKE 60

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---- 162
             + + + SAN   +A+ E +   E  FV+ MN+ SK  G+    F+N+ G+        
Sbjct: 61  LYEAMAIYSANGATIALVEEIAGKEGNFVKMMNDKSKEFGMKDYKFVNSTGLTNQDLKGY 120

Query: 163 ----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA- 206
                     +  +ARD AIL+ R+  DFPQ ++  +I     +          N NW  
Sbjct: 121 HLEGTTLDEKNKMSARDCAILAQRLIQDFPQILNTAKIPKKTFQEGGKYPIDMANFNWML 180

Query: 207 ---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
              +  + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   G
Sbjct: 181 KGLIKQYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKAKSHTARFDETKKLYDYG 240

Query: 264 FYNKTDRKKINYIIKDFY-------QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           F N   +                       + V    + V    ++      + +     
Sbjct: 241 FANFEVKNVYGKDSVVKGHETVRVANAKEKDVVVQTKQAVSLPMRKGNKDGYKKEFKVSN 300

Query: 317 ESHFIDFEKITLLKNKIT 334
           +      +K   +   I 
Sbjct: 301 KEPEAPIKKGVTISKIII 318


>gi|317132149|ref|YP_004091463.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ethanoligenens
           harbinense YUAN-3]
 gi|315470128|gb|ADU26732.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ethanoligenens
           harbinense YUAN-3]
          Length = 443

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 81/363 (22%), Positives = 140/363 (38%), Gaps = 38/363 (10%)

Query: 1   MRQ----FLVIIAMAMLSNIFPFLS--IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           MR+     ++ +A+A+  +  P L+     +       L++ +TG VI E   D    PA
Sbjct: 1   MRKTIMTVVLFLAVAVGISSLPVLAWDPPASVSSSTVYLVNADTGAVIYEKNADAKVYPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKL 110
           S+TKLMTA +           + T +T++K+          S    K G  +T+   L  
Sbjct: 61  SITKLMTALLTMQKYSN---AMDTVLTVTKDDIAPLSGTDSSVLGLKPGEQITVRQLLYG 117

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L+VKS ND A+ +A ++  +   FV  MN  +K +G   TH+ N  G+    HYTTA+D+
Sbjct: 118 LLVKSGNDCAMVLARNVGGSVSAFVDMMNAEAKKIGADHTHYANPEGLQDPNHYTTAKDV 177

Query: 171 AILSWRIKTDFP-----QYMHYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGF 220
            +++ ++  +           Y           K  NTN      +        G+KTG 
Sbjct: 178 YLIARQVMANDFLAGVVDTQSYTIPATNMTTAVKITNTNLLLSSGSKYYLSSVKGIKTGT 237

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALD-------RNTRNKVSASLLSMGFYNKTDRKKI 273
           T  +G  +V+ A     +  AV++G  +        NT    + +L      +   R+ +
Sbjct: 238 TTDAGACLVSMAQSKGMTYYAVVMGGKETTTNGVVDNTAFADTKALYQWVLGSFQMRELL 297

Query: 274 NYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
           +             ++Q     VP           +     T +     K        K 
Sbjct: 298 DTGTPQAQVPLLFAWKQQNLRLVPKEQFNALIPTAQSKATVTVVPHNLPKSVP-APVAKG 356

Query: 327 TLL 329
            L+
Sbjct: 357 QLI 359


>gi|170755502|ref|YP_001781401.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum B1 str.
           Okra]
 gi|169120714|gb|ACA44550.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum B1 str. Okra]
          Length = 378

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  +TL   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKITLRELLYGLMLRSGNDAAIAIAEGIAGSVEDFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYHNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTKGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|255524149|ref|ZP_05391109.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|255512134|gb|EET88414.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
          Length = 358

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 78/309 (25%), Positives = 138/309 (44%), Gaps = 14/309 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
               Y   LD+ +  V+ E         AS TK+MT  V   +       L   I +S  
Sbjct: 25  VDAGYAIALDSKSKVVLYEKKAYTLVPMASTTKIMTTLVAIKY-----GDLERKIEVSGK 79

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+    S   FKKG  ++L   L  L+++S ND A+AIAE +  + ++FVQ MN  +  +
Sbjct: 80  AAGIRGSTVGFKKGEKISLKELLYGLMLRSGNDAAIAIAEGVSGSVEEFVQLMNEYASEI 139

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAIL--SWRIKTDFPQYMHYFQIKGLEIKGKK-YPN 202
           G+  THF + HG+    HYTTA D+A++    +    F   +    + G      + Y N
Sbjct: 140 GVLNTHFHSPHGLDYEDHYTTAYDLALITAKAKEIKLFNDIVSSKDVDGKTYNFTRSYHN 199

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +     A+G+KTG+T  +G  +V S+      +I V+L       R K +  +   
Sbjct: 200 INKILWQLPEANGVKTGYTGKAGKCLVTSSKVQGNDVIVVVLNC---RERWKETKKIYDY 256

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHF 320
              N   ++  +   ++    NL  +V N+   +++    K  +NY+ ++ + +  +   
Sbjct: 257 VNKNYQFKRIFSKG-ENAGSINLHKDVLNLEYEDDIIIPLKNKVNYSVKIVKPEKIDGVI 315

Query: 321 IDFEKITLL 329
              +K+  +
Sbjct: 316 KKGDKVGNV 324


>gi|153941233|ref|YP_001391113.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum F str.
           Langeland]
 gi|152937129|gb|ABS42627.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum F
           str. Langeland]
 gi|295319159|gb|ADF99536.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum F
           str. 230613]
          Length = 378

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  +TL   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKITLRELLYGLMLRSGNDAAIAIAEGIAGSVEDFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYHNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTKGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|171914424|ref|ZP_02929894.1| D-alanyl-D-alanine carboxypeptidase [Verrucomicrobium spinosum DSM
           4136]
          Length = 353

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 115/260 (44%), Gaps = 10/260 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            ML +    +  A   +   + L++ +TG VIA    D     AS  K++TA +V     
Sbjct: 99  TMLFSSGSNVGSAPPIRAESFILVNADTGAVIAARNADTQRGAASTQKILTALIVAEA-- 156

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   + I+ +     PS    + G   T  + L   +VKS+ND+A  +A     +
Sbjct: 157 ---GNLDQRVRIAPSDVVVEPSKLGVRPGEVYTRRDLLIAFLVKSSNDVANVLARDNAGS 213

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----QYMH 186
            + F + MN  +++LG   ++F N HG+   G ++TARD++ ++W    +          
Sbjct: 214 VEAFARKMNARARSLGAVNSYFTNPHGLTGGGQHSTARDLSRIAWAAYNNPVVRDAVRRR 273

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           Y+       +     NTN  +G     +GMKTG+T A+G  ++++A  G + +I V LG 
Sbjct: 274 YYTFTFNNGRRVTLENTNEILGRMAECNGMKTGYTVAAGRCLISTAHSGRKDVILVQLGT 333

Query: 247 LDRNTRNKVSASLLSMGFYN 266
             +         ++  G   
Sbjct: 334 RTKYI-WDDGMVMMRWGLQR 352


>gi|73667472|ref|YP_303488.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ehrlichia canis str.
           Jake]
 gi|72394613|gb|AAZ68890.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ehrlichia canis str.
           Jake]
          Length = 383

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 69/338 (20%), Positives = 135/338 (39%), Gaps = 10/338 (2%)

Query: 1   MRQFLVII---AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M +++V++      +   I   +++    K     + D  +  ++ E+  D  +  +S++
Sbjct: 5   MSRYVVLLLSCFFGIQVCINNAIALPLQTKASQVGIFDFLSETMLLEHNIDEQFVSSSMS 64

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
            LMT YV F ++K     +      SK A +   ++   + G  + + + +  +I  SAN
Sbjct: 65  NLMTLYVTFFYIKAGFVRMEDKFKTSKEAWQKGGNSIFLRAGQLVAVRDLINGIITTSAN 124

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D  + +AE +  ++++FV+ MN  ++ L L+ +HF N  GV       +ARD+  L   +
Sbjct: 125 DACITLAEGISGSQEEFVKEMNRIAQKLNLTKSHFTNVIGVQDQNQVMSARDLITLMVNL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             DFP+Y H F  K  +       + N  +      D M    T     +IVA A    +
Sbjct: 185 FKDFPEYYHLFSKKDFKYNNIYQESINMLL-PDNRVDCMIAAHTDTGYGSIVA-AKHEGR 242

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ----QNLSNEVPNIS 293
            +   I G   +  R      LL   F N + +   N   K         +        +
Sbjct: 243 KIFMFINGLQTKEERLSEIKQLLDYSFNNFSSKTIFNKDNKVKEIAVRGGDSKYVGAAFN 302

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
           ++V  +  +  +Y+T         +     +K   +  
Sbjct: 303 KDVTISYPKG-SYDTVKTFFSHDNTISAPIKKGQEIGK 339


>gi|329122055|ref|ZP_08250663.1| serine-type D-Ala-D-Ala carboxypeptidase [Dialister micraerophilus
           DSM 19965]
 gi|327466862|gb|EGF12378.1| serine-type D-Ala-D-Ala carboxypeptidase [Dialister micraerophilus
           DSM 19965]
          Length = 323

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 13/278 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             V+I +       P + +          + D NTG  +     +    PAS TK++T  
Sbjct: 34  IAVLIKITPPPPQKPQMKVLPQVDAVSVAIADGNTGKFLGGKDSELRVYPASTTKILTCI 93

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +           L     I+ NA++   +    K    ++L   L  +++ S ND AV++
Sbjct: 94  IALEE---GHDKLNDNALITPNATKQDGTCLGLKPDLPISLQELLYGMMLVSGNDAAVSV 150

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP- 182
           AE++    + F++ MN  +KN+G   ++F+NA+G+    HYTTA DMA ++     +   
Sbjct: 151 AETVGGDYETFIKLMNAKAKNIGAVNSNFVNANGLTDKNHYTTASDMAKIAVYAMKNQNF 210

Query: 183 -----QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                +  H    +   I+  +  N     G + GA+G+KTG T A+G  +VASA +   
Sbjct: 211 RKIVKEPFHMMTYRDGTIRRIENRNEFLESG-YEGANGIKTGMTEAAGDCLVASAEREGH 269

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
            ++  I        R +    LL  GF    + +    
Sbjct: 270 LVVVSIYN---DENRWEDVKKLLDYGFDAIKNEEMYEK 304


>gi|229196731|ref|ZP_04323474.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
 gi|228586806|gb|EEK44881.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
          Length = 338

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++   +++ +    F         +     L+D ++G V+     + P   A+L
Sbjct: 4   LKKFTILLLSFVITALIVLYFYLYVNGPIIQAKSAILIDAHSGEVVYTKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E    L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYITLEQLNEGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E KF Q MN  +K+L    ++ F+NA G+    +    TTA ++A 
Sbjct: 124 NRSALALAEHIAGNEDKFTQLMNEKAKHLKLSQSSPFLNATGMNNDTNKLSTTTAIEVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++       K  K  NTN  +          G DG++T F+   
Sbjct: 184 LATQLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAKRGDTRLISVILDAENENSTFIETKKLLQYGFD 284


>gi|257784553|ref|YP_003179770.1| Serine-type D-Ala-D-Ala carboxypeptidase [Atopobium parvulum DSM
           20469]
 gi|257473060|gb|ACV51179.1| Serine-type D-Ala-D-Ala carboxypeptidase [Atopobium parvulum DSM
           20469]
          Length = 407

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 10/264 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            SN        +  +     + D+  G+V+    PD     AS+TK+MTA V        
Sbjct: 47  SSNKSSVTDEPKLTEATTAIVTDSQ-GNVLWSKNPDQELPMASITKVMTAIVALDSG--- 102

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L  P  I+    E     +      T TL   + +++V SAND A  IA ++  +++
Sbjct: 103 -VNLDEPCKITVPDLEEGSQVAGLTSDDTPTLRQLIMMMLVYSANDAAYNIAINVSGSQQ 161

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F   MN  +  +G++ T F N HG+   GHY+TARD+A++    +  +P        + 
Sbjct: 162 AFADQMNKKAAEIGMTHTQFQNPHGLDADGHYSTARDLALMGRYAREHYPLIASAVHTRS 221

Query: 193 LEI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                  + + + +T+  + T+ G  G+KTG   +    + AS  +G+ +L   +LG   
Sbjct: 222 YTTTVGGEQRTFHSTDDLMDTYRGLLGIKTGAEDSGTAFLGAS-KRGNITLYTCVLGCET 280

Query: 249 RNTRNKVSASLLSMGFYNKTDRKK 272
              R   +A L++  + N      
Sbjct: 281 IQGRFDDTAILMNWAYRNYNRISV 304


>gi|226365711|ref|YP_002783494.1| D-alanyl-D-alanine carboxypeptidase [Rhodococcus opacus B4]
 gi|226244201|dbj|BAH54549.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus opacus
           B4]
          Length = 426

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 92/262 (35%), Gaps = 21/262 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++        + + D ++G V+A   P   + PAS  K++ A V           L  
Sbjct: 92  APALPADIAASGWVVADIDSGDVLAAKDPHGRYRPASTIKMLLALVALDE-----LDLDK 146

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T +   +    S     K    T    ++ L++ S ND A  +A      +   V+ M
Sbjct: 147 TVTATAEDAAVEGSAVGIGKNGQYTNRQLMQGLVMASGNDAAHLLAR-QLGGDAATVEKM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +  LG   T      G+   G  ++  D+A++      +                  
Sbjct: 206 NRLADTLGAHDTRTATPSGLDGPGMSSSPFDLALIFHNAMKNPTFAELISTETVQFPGFP 265

Query: 199 K--------------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           K                N N  +  + GA G KTGFT  +    V  A    + L+  ++
Sbjct: 266 KDPAIPEDQDRPPFALANDNQLLYNYPGALGGKTGFTDDARHTYVGGADHDGRRLMVTLM 325

Query: 245 GALDRNTR-NKVSASLLSMGFY 265
           GA  +  R  + +A LL  GF 
Sbjct: 326 GAEAQPIRPWEQAARLLDYGFA 347


>gi|256843728|ref|ZP_05549216.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus
           125-2-CHN]
 gi|256615148|gb|EEU20349.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus
           125-2-CHN]
          Length = 433

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 129/349 (36%), Gaps = 35/349 (10%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            + +      +     +D+++G ++           AS+TKL+T Y+    +K  K    
Sbjct: 39  SYQADQVKLNVKSAIAIDSDSGQILYAKNATQTLPIASMTKLVTVYLALQAIKNNKLSWD 98

Query: 78  TPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  ++K 
Sbjct: 99  QKVKPTAPIVKVANNAEYSNVPLKMGHSYTIKQLYQATLIESANGAAMLLGQTIAGSQKA 158

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWRIKT 179
           F+  M    K  G+       A G+                  +  +A+DMAI+   +  
Sbjct: 159 FIDQMRAQVKKWGIEDAKIYTACGLPNGNLGKDAYPGVNKNAENSMSAKDMAIVGQNLIK 218

Query: 180 DFPQYMHYFQIKGLEI----KGKKYPNTNWAVG---TFLG---ADGMKTGFTCASGFNIV 229
           DFP+ +   ++  L+        K  N NW +     +      DG+KTG T A+G   +
Sbjct: 219 DFPEVLDTTKLAHLDFKDAGHTTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGACFI 278

Query: 230 ASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
            +       LI V++GA         R   +  L++  F              +  +   
Sbjct: 279 GTVQHNGARLITVVMGARHRDGTDPARFMQTKKLMNYIFTKYRPVTMTAGSQMNGAKTIK 338

Query: 286 SNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLLKN 331
             +  N +  +    K  I        +  + +K+S     +K   + +
Sbjct: 339 VTDGDNATTNLGLKSKTTIWDPADGKTLVASLNKKSVEAPIKKDQTVGD 387


>gi|297621737|ref|YP_003709874.1| putative D-alanyl-D-alanine carboxypeptidase [Waddlia chondrophila
           WSU 86-1044]
 gi|297377038|gb|ADI38868.1| putative D-alanyl-D-alanine carboxypeptidase [Waddlia chondrophila
           WSU 86-1044]
          Length = 426

 Score =  138 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 141/360 (39%), Gaps = 36/360 (10%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
             +  A+L        I          L++ +TG ++ E        PASLTK+ TA   
Sbjct: 5   FCLIFALLLANSILNGIEIKIHADSAILMNADTGAILYEKNGKKEHFPASLTKIATAIYT 64

Query: 66  FSFLKEKKAMLTTPIT-----ISK------------NASEYPPSNSTFKKGSTMTLDNAL 108
               ++K   + T        +S+                   S+   KKG  ++L + L
Sbjct: 65  LQLREQKLDKMLTAEHEAIASVSEEEMVRSNYSLPAYWLTRGTSHIGIKKGEELSLRDLL 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
             ++V S  D +  IA  +  T   F++ +N   K LG ++T+ MN HG+    H +TA 
Sbjct: 125 YGMMVASGGDASNMIALYMGGTIPVFMEELNLYLKELGCTSTYLMNPHGLHHPRHVSTAY 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY---------PNTNWAVGTFLGADGMKTG 219
           DMA+L+     +         ++    +  K                   +  A G+KTG
Sbjct: 185 DMAVLTREALKNSTFREIVKTVRCQRPETNKQKATTLIQTNRLLRKGKYYYSKAIGVKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +T  +  N+VA+A  GD++LIAV +   DR      +  L +  F      +KI+  +  
Sbjct: 245 YTSQAKNNLVAAAKDGDRTLIAVFMHCDDREKMFLDAKQLFNKAFK----EEKISRKVFQ 300

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYN-TQMKEAKDK-----ESHFIDFEKITLLKNKI 333
              Q ++  V   ++ + T  K  + ++    +E K K      +  +  +K   +   +
Sbjct: 301 AGPQKMTLRVEGAAKSIATYIKNDVVFDFYPSEEPKLKCLLKWNAVSLPVQKDQQVGVLV 360


>gi|153854350|ref|ZP_01995649.1| hypothetical protein DORLON_01644 [Dorea longicatena DSM 13814]
 gi|149753125|gb|EDM63056.1| hypothetical protein DORLON_01644 [Dorea longicatena DSM 13814]
          Length = 536

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/339 (18%), Positives = 122/339 (35%), Gaps = 37/339 (10%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       ++D  TG ++     D    PAS+TK++T+ +   +       L+  +
Sbjct: 88  PKGPGTYGEAAIVMDAGTGSILYAKNIDEHEYPASITKVLTSLIALKY-----GNLSDKV 142

Query: 81  TISKNASEYP-------PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           T S +   +                     L   L     ++A  +A  + ++       
Sbjct: 143 TFSNDCISFMQPGDSSVGLKEGNVISLEQALYATLLASANEAAYAVAENVGKNAGHDYDW 202

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F+Q MN   K+LG   ++F+NA+G+    HYT ARDMA++       +P+++   Q +  
Sbjct: 203 FIQQMNEECKSLGGKNSNFVNANGLHDDNHYTCARDMALIGR-EIWRYPEFLKICQEQSY 261

Query: 194 ------EIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                   +   +P  +          +      KTG+T  +   ++  A  G+  L+ V
Sbjct: 262 KIPASDTTEEHVFPQHHKMLIKENKNYYQYVVAGKTGYTSNALSTLITLADNGNMKLVCV 321

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ--------QNLSNEVPNISE 294
           +L     N     + +L    F N    +  +    D  +        Q+  +   + SE
Sbjct: 322 VLRTHGVNI-YPDTKNLFEYAFNNFQKIQVADEKKPDEVEKFISAADSQSAVSAQSDGSE 380

Query: 295 EVCTTQKEIINY----NTQMKEAKDKESHFIDFEKITLL 329
           +  + Q     Y    +  +   KD     ID+E   + 
Sbjct: 381 DTESVQTGGNEYQPLEDGYVILPKDVSYKDIDYEITDVD 419


>gi|296186607|ref|ZP_06855009.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|296048644|gb|EFG88076.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
          Length = 379

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 81/345 (23%), Positives = 148/345 (42%), Gaps = 29/345 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIAET---------------NKLPYYTLLDTNTGHVIAENYPDH 49
           ++I+ + +++   P    A                     Y   LD+ +  V+ E     
Sbjct: 10  ILILTVFIVTLFVPIDVRALENSNDNGKENVTKDIYVDAGYAIALDSKSKVVLYEKKAYT 69

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS TK+MT  V   +       L   I +S  A+    S   FKKG  ++L   L 
Sbjct: 70  LVPMASTTKIMTTLVAIKY-----GDLERKIEVSGKAAGIRGSTVGFKKGEKISLKELLY 124

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+++S ND A+AIAE +  + ++FVQ MN  +  +G+  THF + HG+    HYTTA D
Sbjct: 125 GLMLRSGNDAAIAIAEGVSGSVEEFVQLMNEYASEIGVLNTHFHSPHGLDYEDHYTTAYD 184

Query: 170 MAIL--SWRIKTDFPQYMHYFQIKGLEIKGKK-YPNTNWAVGTFLGADGMKTGFTCASGF 226
           +A++    +    F   +    + G      + Y N N  +     A+G+KTG+T  +G 
Sbjct: 185 LALITAKAKEIKLFNDIVSSKDVDGKTYNFTRSYHNINKILWQLPEANGVKTGYTGKAGK 244

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
            +V S+      +I V+L       R K +  +      N   ++  +   ++    NL 
Sbjct: 245 CLVTSSKVQGNDVIVVVLNC---RERWKETKKIYDYVNKNYQFKRIFSKG-ENAGSINLH 300

Query: 287 NEVPNI--SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +V N+   +++    K  +NY+ ++ + +  +      +K+  +
Sbjct: 301 KDVLNLEYEDDIIIPLKNKVNYSVKIVKPEKIDGVIKKGDKVGNV 345


>gi|295109905|emb|CBL23858.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 412

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 134/375 (35%), Gaps = 50/375 (13%)

Query: 4   FLVIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           F+ +I +  L   F   +            +++        L+D ++G ++ E   + P 
Sbjct: 8   FIYVILICNLYCQFSVHAGSLDHAILMVPQLSDDLYALSAVLMDADSGRILYEKEGEMPR 67

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS TK++T  +               + +S NA+  P      +KG    L++ L  L
Sbjct: 68  PNASTTKVLTCILALENGDG-----DDYVQVSANAASQPQVKLGLQKGEQYYLEDLLYSL 122

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTA 167
           +++S ND AVAIAE +  + K F   MN  ++ +G + THF+  +G+        H+TTA
Sbjct: 123 LLQSHNDSAVAIAEHIGGSVKGFSDLMNAKARKIGCTDTHFITPNGLDAEDSSGTHHTTA 182

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFT 221
            D+A +      +   ++   Q K          +     NTN       G    KTGFT
Sbjct: 183 SDLARIMRYAIKN-KVFLKIAQTKEYSFSDLSKKRTFSVHNTNALFSMTDGVLAGKTGFT 241

Query: 222 CASGFNIVASAIQGDQSLIAVILGALD---RNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
             +G+  V +  + D++ I  +L A     +  +   +  LL  G  N   R        
Sbjct: 242 GDAGYCYVCAVQKDDRTFIIALLAAGWPGHKTYKWHDTLKLLDYGKNNFYYRSFWQEPDL 301

Query: 279 ---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD----------KESH 319
                         +  N +P+    +            Q    K+          K+  
Sbjct: 302 SYIPVKDGIPEITSHTDNLLPDGRIYIGGRINATEKEKQQKILLKNDDRLQYQVCLKDEL 361

Query: 320 FIDFEKITLLKNKIT 334
                K   +   + 
Sbjct: 362 QAPVRKGEQIGRVVY 376


>gi|152974802|ref|YP_001374319.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023554|gb|ABS21324.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 423

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/287 (22%), Positives = 123/287 (42%), Gaps = 22/287 (7%)

Query: 4   FLVIIAMAMLSNI----------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           F+++I +  ++ +           P           +   +D  TG V+ +        P
Sbjct: 10  FVLVICLFFVTPLPLHAETGMEPAPAPGQGPNVFGKFAVSIDAKTGDVLYDKNAHEHAFP 69

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLL 111
           AS+TK++TA ++    K          T+S+ A +   SN    F+ G T+  + AL +L
Sbjct: 70  ASMTKVLTAILLMEHTK-----PEEQFTLSQAALDQEKSNYQLEFQAGETVDRNTALMIL 124

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           +V SAND+A AI E +  + + F   MN  +K LG + +HF+  +G+    HYTTA DMA
Sbjct: 125 MVLSANDVAYAIGEHIGGSIENFAHMMNEKAKQLGATDSHFVTPNGLHDPNHYTTAYDMA 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNI 228
           +++      +P+ +     K   +   +   + +    +     + G KTGFT  +   +
Sbjct: 185 MITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKANYFENPYSIGGKTGFTNEARNTL 243

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           V    +    +I V++ +       +    +    F   T +  ++ 
Sbjct: 244 VLLNEKDGNRIINVVMASQKPEI-YEDMKQMAEYAFPQFTKQLVLDK 289


>gi|259048108|ref|ZP_05738509.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella adiacens
           ATCC 49175]
 gi|259035169|gb|EEW36424.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella adiacens
           ATCC 49175]
          Length = 465

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/374 (19%), Positives = 142/374 (37%), Gaps = 42/374 (11%)

Query: 1   MRQFLVIIA-MAMLSNIFPFLSIAETN-----------KLPYYTLLDTNTGHVIAENYPD 48
           M++F+  ++  AM +  F  +  A+              +  Y  ++  +G ++ +N  D
Sbjct: 8   MKKFVCALSIFAMSATSFTPVIYAQDAAKEKEEAAAIQDVQSYIAIEQTSGKILMQNNQD 67

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE----YPPSNSTFKKGSTMTL 104
                AS++K+++ Y++   +K+ +    T I IS  A++    Y  SN         T+
Sbjct: 68  EVRGIASMSKMISQYLILESIKKGEITWETKIPISARANQLSANYNLSNVPLWPNEKYTI 127

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---- 160
                 + + SAN   +AIAE +  +E  +++ M       G+     +N  G+      
Sbjct: 128 KELFDAISIYSANAATLAIAEYIGGSEANWIERMKAKLNEWGIKDATIINVTGLPNKYGG 187

Query: 161 ----------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-----KYPNTNW 205
                       +  +AR +AI++  +  DFP+ +    I     +       K  N N+
Sbjct: 188 SEKNPAFGDEDENSMSARSVAIIAKNLVNDFPEILKISSIPTQTFRPNGSGTTKMDNFNY 247

Query: 206 AVG----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            +      + G  G+KTG + + G +I  +A +   S+I V +G+ +   R KV+  LL 
Sbjct: 248 LLPGLLFEYEGVTGLKTGTSESGGASITTTATRNGFSVIVVSMGSKEPLNRFKVTRHLLD 307

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
             F         +          +  E     E +     +          A  +    I
Sbjct: 308 ELFKKYEGLIVGSPGKSVQNLAPIPLEG-GTEETLSVDYGKPFVAAVPKGTALSQ--IKI 364

Query: 322 DFEKITLLKNKITK 335
            F  +  LK +  K
Sbjct: 365 GFIPLDELKTEDGK 378


>gi|282849251|ref|ZP_06258636.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella parvula ATCC
           17745]
 gi|282580955|gb|EFB86353.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella parvula ATCC
           17745]
          Length = 285

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 11/258 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S          +       L+D +T  ++    PD   +PAS TK++T          K
Sbjct: 29  ASVAQAAYIAPPSTVGEAVVLIDADTKEILFAKNPDKWMHPASTTKMVTLLTALEL---K 85

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L    TIS  A+    SN   + G  +TL+  L+ ++V S ND AV +AE++  +  
Sbjct: 86  GTQLDELATISSYATSMEESNLGVRVGDQITLEGVLEGMMVASGNDAAVVVAENVSGSVD 145

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYF 188
           KF + M   +   G   + F+N HG+ Q GH++TARD+A++                 Y+
Sbjct: 146 KFAKDMTRIAAKAGAKNSVFLNPHGLTQKGHHSTARDLAMIAAYGMKYQMFRDKVANDYY 205

Query: 189 QIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           ++       +    TN  +   + GA+G+KTGFT A+G  ++ASA +   ++I V+L   
Sbjct: 206 KVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIASATRKGHTMIVVMLN-- 263

Query: 248 DRNTRNKVSASLLSMGFY 265
             + R   +   L  GF 
Sbjct: 264 -DDNRWDEAVQFLDYGFK 280


>gi|325663285|ref|ZP_08151735.1| hypothetical protein HMPREF0490_02476 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470739|gb|EGC73969.1| hypothetical protein HMPREF0490_02476 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 547

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/333 (20%), Positives = 132/333 (39%), Gaps = 24/333 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN                 ++D N+G ++     D    PAS+TK+MTA V     +   
Sbjct: 104 SNALKNWPEGPGIFAESGIIMDMNSGAILYAKNIDEKEFPASITKIMTALVALENSE--- 160

Query: 74  AMLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             LT  +  ++      EY  ++   + G  +T+++AL  +++ SAN+++ AIA+++   
Sbjct: 161 --LTDKVHFTEESVAFLEYGDASIGMQPGEEITMEDALYGMLLASANEVSYAIADTVGNG 218

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              F++ MN  ++ LG + THF N HG+    HY +ARDMA+++        ++      
Sbjct: 219 YDNFIRMMNEKAEELGCTNTHFTNPHGLHDEEHYVSARDMALIAA-AAFQHEEFRKITNT 277

Query: 191 KGLEIKGKKYPNTNWAVG------------TFLGADGMKTGFTCASGFNIVASAIQGDQS 238
               I      N                   +    G KTG+T  +   +V+    G+  
Sbjct: 278 YEHRIPPTNLVNEERVFQQYHQMLYDGTDTFYEPCVGGKTGYTDQALSTLVSYLDNGELQ 337

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE--VPNISEEV 296
           L++V L     +     + ++    F N          +    ++   +   V   + E 
Sbjct: 338 LVSVNLKTHGVHV-YPDTKNMAEYVFNNFKKIPLEGKDLPKGVKETEEDAYIVAPKNVEF 396

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
              + EI+  +   K  K   ++  D + + + 
Sbjct: 397 QDVKAEIVPEDKSGKSKKGTLTYTYDGQTVGVS 429


>gi|325681439|ref|ZP_08160965.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus albus 8]
 gi|324106929|gb|EGC01219.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus albus 8]
          Length = 387

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 70/347 (20%), Positives = 132/347 (38%), Gaps = 18/347 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK---------LPYYTLLDTNTGHVIAENYPDHPWN 52
           +  ++ I + +L  + P    AET                 ++ +TG V+ E   D    
Sbjct: 6   KLTIMFICLTVLCGLLPDRVCAETVPVEDLLASMPADEIIAVECSTGKVLMEKNSDITAE 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            + L KLM   +    ++  +  L   +T S NA+  P       K   +T+D  LK + 
Sbjct: 66  VSHLAKLMLVLLTAEKIENGELSLDDVVTASANANSQPAPQIWLDKNEKITVDELLKSIT 125

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V +AND AVA+AE +  T +  V  MN  ++ L + +T + +  G+ +H     A    +
Sbjct: 126 VSNANDGAVALAEHIFGTSESAVAEMNRKAELLDMRSTTYADVCGIDEHTLSDAADTAVL 185

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
            S  +K +         ++ +     +  N N  V ++ G  GMK   T A+G   V +A
Sbjct: 186 ASELVKHEMLIPYFTSWLEYVRDGKAELVNLNRPVRSYKGITGMKACSTSAAGECAVVTA 245

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT------DRKKINYIIKDFYQQNLS 286
            +    +  VI+G   R   + +S  LL M F + +        + +  I  +  +Q   
Sbjct: 246 QRSGMDIAVVIIGGDKRENVDDMSKKLLDMCFESYSLYSPEPTAEMLKKIPVNGGEQKKV 305

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                   +    +     +  + ++ +          K  +     
Sbjct: 306 AVTFGELPDAVIPKGSSSGFEMKFEKEEQL---TAPVRKGQVCGRLT 349


>gi|229103155|ref|ZP_04233841.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228680260|gb|EEL34451.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 338

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQF----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F    L  I  A++   F         +     L+D N+G VI +   + P   A+L
Sbjct: 4   LKKFTILLLSFIITALIVLYFYLYVNGPIIQAKSAILIDANSGEVIYKKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L   K  L   + IS    +   +          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNNGKIQLDESVKISNELFQAETTPMQVTAKDKTTVRDLLHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L LS          A+        TTA+D A 
Sbjct: 124 NRSALALAEHIGGNEDNFTTLMNEKAKQLQLSQPSPFLNSTGANQDTNKQSNTTAKDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+  +  DFP  ++  ++   +   K +   N     +         G DG++T F+   
Sbjct: 184 LATHLVKDFPNVLNMTKLTSYQFTFKNFQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
             + V +A  GD  LI+VIL + + NT    +  LL  GF 
Sbjct: 244 NNSFVGTAKLGDTRLISVILESDEENTTFIETKKLLQYGFE 284


>gi|229074990|ref|ZP_04207992.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
 gi|228708047|gb|EEL60218.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
          Length = 338

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQF----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F    L  I  A++   F         +     L+D N+G VI +   + P   A+L
Sbjct: 4   LKKFTILLLSFIITALIVLYFYLYVNGPIIQAKSAILIDANSGEVIYKKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L + +  L   + IS    +   +          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDGQIQLDESVKISNELFQAETTPMQVTAKDKTTVRDLLHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L LS          A+        TTA+D A 
Sbjct: 124 NRSALALAEHIGGNEDNFTMLMNEKAKQLQLSQPSPFLNSTGANQDTNKQSNTTAKDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+  +  DFP  ++  ++   +   K +   N     +         G DG++T F+   
Sbjct: 184 LATHLVKDFPNVLNMTKLTSYQFTFKNFQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
             + V +A  GD  LI+VIL + + NT    +  LL  GF 
Sbjct: 244 NNSFVGTAKLGDTRLISVILESDEENTTFIETKKLLQYGFE 284


>gi|295090867|emb|CBK76974.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cf.
           saccharolyticum K10]
          Length = 528

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 30/338 (8%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P              ++D ++G V+      +   PAS+TKL+TA VV        
Sbjct: 27  ALAAPEWPSDTGTMADIGIVIDADSGAVLFGQGIHNQSPPASITKLLTALVVVENS---- 82

Query: 74  AMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             L   +T S +A         +    ++G  +++ + L LL+++S+N  A A+AE +  
Sbjct: 83  -SLDDMVTFSHDAVYNVESGSGNKKNIEEGDVLSVRDCLYLLLLQSSNQAANALAEHVAG 141

Query: 130 TEKKFVQHMNNTSKNLGL-SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
           +   FV+ MN     LG    THF N  G+     + +A DMA+++     D  Q     
Sbjct: 142 SRDAFVEMMNEKVSELGCVDDTHFANPSGLNDDTQHVSAYDMALIAK-AAFDNQQVYEIA 200

Query: 189 QIKGLE-------IKGKKYPNTNW--------AVGTFLGADGMKTGFTCASGFNIVASAI 233
             K  +         G    N +         +   +  A   KTG+T  +G  +V  A 
Sbjct: 201 STKSYKLPATINNPNGVTCTNEHRLIITEDETSELYYPAAKAGKTGYTSLAGNTLVTCAE 260

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +  + LI+VIL             +LL  GF    +         +  +     E   ++
Sbjct: 261 EDGRCLISVILKGQPSPNYFLDGKNLLQFGFERFQNLSV----PDNETRYVTGEESVAVN 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
               +     I   T +   KD        E +T+L +
Sbjct: 317 GTEYSPSDLEIEAGTVITIPKDASFQDAALELVTVLPD 354


>gi|218231994|ref|YP_002370166.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           B4264]
 gi|218159951|gb|ACK59943.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           B4264]
          Length = 423

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 124/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 343 KIGTELDKSLSEDGHLVAPIKKDTKVGSITLE 374


>gi|58337864|ref|YP_194449.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus acidophilus
           NCFM]
 gi|58255181|gb|AAV43418.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus acidophilus
           NCFM]
          Length = 432

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 136/356 (38%), Gaps = 35/356 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+N+G ++     D     AS+TKL+T Y+  + +K KK 
Sbjct: 35  TSSSYRNNEVNLDVKSAIAIDSNSGQILYAKNADKTLPIASMTKLITVYLTLNAIKNKKL 94

Query: 75  MLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 95  SWNQKVKPTASIVKVANNAEYSNVPLKMGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 154

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +KKF+  M    K  G+       A G+                  +  +A+DMAI+   
Sbjct: 155 QKKFIDQMRAQVKKWGIEDAEIYTACGLPNGNVGKDAYPGVNKNAENTMSAKDMAIVGQH 214

Query: 177 IKTDFPQYMHYFQIKGLEIKG----KKYPNTNWAVG---TFLG---ADGMKTGFTCASGF 226
           +  ++P+ +   ++  L+ K      K  N NW +     +      DG+KTG T A+G 
Sbjct: 215 LLKEYPEILDTTKLAHLDFKDGNKTTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGA 274

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             + +       LI V++GA        +R   +  L+S  F              +  +
Sbjct: 275 CFIGTVEHNGARLITVVMGARHQDGTDPSRFIQTKKLMSFIFNKYRPVTMTAGSQINGAK 334

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMK---EAKDKESHFIDFEKITLLKNKITK 335
                +  + +  +    K  I      K    + +K++     EK   + N   K
Sbjct: 335 SIKVTDGKDATTNIGLKNKTTIWDPADGKTLTASLNKKTIDAPLEKNQTVGNYQLK 390


>gi|229097094|ref|ZP_04228060.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|229116057|ref|ZP_04245450.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228667392|gb|EEL22841.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228686323|gb|EEL40235.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 338

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQF----LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F    L  I  A++   F         +     L+D N+G VI +   + P   A+L
Sbjct: 4   LKKFTILLLSFIITALIVLYFYLYVNGPIIQAKSAILIDANSGEVIYKKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L + K  L   + IS    +   +          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDGKIQLDESVKISNELFQAETTPMQVTAKDKTTVRDLLHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L LS          A+        TTA+D A 
Sbjct: 124 NRSALALAEHIGGNEDNFTTLMNEKAKQLQLSQPSPFLNSTGANQDTNKQSNTTAKDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+  +  DFP  ++  ++   +   K +   N     +         G DG++T F+   
Sbjct: 184 LATHLVKDFPNVLNMTKLTSYQFTFKNFQVFNTNKMIYSLNENIKFQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
             + V +A  GD  LI+VIL + + NT    +  LL  GF 
Sbjct: 244 NNSFVGTAKLGDTRLISVILESDEENTTFIETKKLLQYGFE 284


>gi|302337982|ref|YP_003803188.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635167|gb|ADK80594.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Spirochaeta
           smaragdinae DSM 11293]
          Length = 434

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/296 (21%), Positives = 115/296 (38%), Gaps = 23/296 (7%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    L+D  TG ++   + D    PAS+TKL++ ++++  ++E +  +   I + 
Sbjct: 67  PELSCRSAVLIDDETGTLLFVKHGDEVIPPASMTKLVSLHLIYREIEEGRLSIDQEIIVP 126

Query: 84  KNASEYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             A              + G ++ L + ++ L + S ND AV +A+ +  +   +V  MN
Sbjct: 127 DFADFRSAPPRSSLMFLQAGQSVRLIDLMRGLALPSGNDAAVLVADLIAGSTPAYVAMMN 186

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE----- 194
           +  + LG S+  F ++ G  +H   T         + + T          +         
Sbjct: 187 DEMRRLGFSSIFFEDSSGYSEHNRATALDFARFARFYVDTHPESLKELHSLTSFSYPKTE 246

Query: 195 --------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                         PN N  VG     DG+KTG+   SG+N+  +A    + LIAV++G 
Sbjct: 247 NENGVKAVYGSVTQPNHNSLVGRHPWVDGLKTGYIDESGYNVALTAETRGRRLIAVLMGG 306

Query: 247 LDRNTRNK------VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
              N+R+          +LLS GFY  T        +  F           ++  +
Sbjct: 307 PGENSRDGDLYRVIDGTNLLSYGFYRFTVIIPDLPKLPPFSVIGGKERSVEVAVPL 362


>gi|295693488|ref|YP_003602098.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus ST1]
 gi|295031594|emb|CBL51073.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus ST1]
          Length = 433

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 132/352 (37%), Gaps = 35/352 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+++G ++           AS+TKL+T Y+    +K  K 
Sbjct: 36  TTSSYQADQVKLNVKSAIAIDSDSGQILYAKNAAQTLPIASMTKLVTVYLTLQAIKNHKL 95

Query: 75  MLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 96  SWDQKVKPTAPIVKVANNAEYSNVPLKLGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 155

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +K F+  M +  K  G+       A G+                  +  +A+DMAI+  +
Sbjct: 156 QKAFIDQMRDQVKKWGIEDAKIYTACGLPNGNLGKDAYPGVNKNAENTMSAKDMAIVGQK 215

Query: 177 IKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVG---TFLG---ADGMKTGFTCASGF 226
           + + FP+ +   ++  L         K  N NW +     +      DG+KTG T A+G 
Sbjct: 216 LISAFPEVLETTRLAHLNFKDAGHVTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGA 275

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             + +       L+ V++GA         R + +  L++  F              +  +
Sbjct: 276 CFIGTVQHNGARLLTVVMGARHRDGTDPARFEQTKKLMNYVFTKYRPVTMTAGSQMNGAK 335

Query: 283 QNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLLKN 331
                +  N +  +   QK  I        +  + +K+S     +K   + +
Sbjct: 336 TIKVVDGDNATTNLGLKQKTTIWDPADGKTLVASLNKKSVEAPIKKDQTVGD 387


>gi|30023419|ref|NP_835050.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|229130636|ref|ZP_04259592.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|229147928|ref|ZP_04276269.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|296505812|ref|YP_003667512.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|29898980|gb|AAP12251.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|228635578|gb|EEK92067.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|228652975|gb|EEL08857.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|296326864|gb|ADH09792.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 423

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 124/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 343 KIGTELDKSLSEDGHLVAPIKKDTKVGSITLE 374


>gi|227904514|ref|ZP_04022319.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus acidophilus ATCC
           4796]
 gi|227867723|gb|EEJ75144.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus acidophilus ATCC
           4796]
          Length = 432

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/356 (19%), Positives = 136/356 (38%), Gaps = 35/356 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+N+G ++     D     AS+TKL+T Y+  + +K KK 
Sbjct: 35  TSSSYRNNEVNLDVKSAIAIDSNSGQILYAKNADKTLPIASMTKLITVYLTLNAIKNKKL 94

Query: 75  MLTTPIT----ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 95  SWNQKVKPTASIVKVANNAEYSNVPLKMGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 154

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +KKF+  M    K  G+       A G+                  +  +A+DMAI+   
Sbjct: 155 QKKFIDQMRAQVKKWGIEDAEIYTACGLPNGNVGKDAYPGVNKNAENTMSAKDMAIVGQH 214

Query: 177 IKTDFPQYMHYFQIKGLEIKG----KKYPNTNWAVG---TFLG---ADGMKTGFTCASGF 226
           +  ++P+ +   ++  L+ K      K  N NW +     +      DG+KTG T A+G 
Sbjct: 215 LLKEYPEILDTTKLAHLDFKDGNKTTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGA 274

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             + +       LI V++GA        +R   +  L+S  F              +  +
Sbjct: 275 CFIGTVEHNGARLITVVMGARHQDGTDPSRFIQTKKLMSFIFNKYRPVTMTAGSQINGAK 334

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMK---EAKDKESHFIDFEKITLLKNKITK 335
                +  + +  +    K  I      K    + +K++     EK   + N   K
Sbjct: 335 SIKVTDGKDATTNIGLKNKTTIWDPADGKTLTASLNKKTIDAPLEKNQTVGNYQLK 390


>gi|325686780|gb|EGD28805.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK72]
          Length = 409

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 124/361 (34%), Gaps = 41/361 (11%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +            +D  +G ++ E   + P    S+T L+T Y+V+  +     
Sbjct: 2   TASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLLTVYLVYEAIDRGDL 61

Query: 75  MLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              T + IS  A      P  ++   +     + + +   ++ S+N   +A+AE +  +E
Sbjct: 62  TADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSNSATIALAEKVGGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV------------------------QHGHYTTA 167
           + FV+ M    K  G+     +N+ G+                            +  +A
Sbjct: 122 ENFVEMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASASTSKKSKDTENKFSA 181

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCA 223
            D+A++S  +  DFPQ          +I G    N N+          G DG+K G +  
Sbjct: 182 YDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNFRSGVDGLKAGSSDK 241

Query: 224 SGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI------ 273
            G + VA+  +    +I V+L       D   R   +ASL++    N T    +      
Sbjct: 242 GGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQNFTQTTIVAEGEAY 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           N                   ++    ++       +++ + +++      +K T L    
Sbjct: 302 NKSKSTVIDGKQKTVPAVARKDFTIIERIANQAEHKVEFSTNEKGFQAPLKKNTELGTLT 361

Query: 334 T 334
            
Sbjct: 362 Y 362


>gi|288921678|ref|ZP_06415947.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Frankia sp.
           EUN1f]
 gi|288346947|gb|EFC81255.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Frankia sp.
           EUN1f]
          Length = 572

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 12/266 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
             +          + + D  +G ++A + P+ P  PAS  K++TA  V            
Sbjct: 86  TSVPEPAGITAEAWMVADAISGAILAAHNPNLPDLPASTMKMLTALTVLP-----SLPPD 140

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +TIS  A+    +      G   T+ +    +++ S ND  VA+ E+        ++ 
Sbjct: 141 RVVTISDEAARVDGTRVGLVPGVRYTVRDLATAMLIASGNDATVALVEAA-GGRDAVLER 199

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK----GL 193
           MN  + +LG   T   +  G+   G +TTA D+A++   +  +     +    +    G 
Sbjct: 200 MNRLAASLGAHDTVAGDPTGLDAPGQHTTAHDLAVIGRAVLNNPTVRAYLTIPRAVLPGR 259

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
             +  +  N N  +GT+ G  G+K G+T A+G   V +A++  ++LI  +L      T  
Sbjct: 260 GDERFEIANHNTLLGTYEGTIGIKNGYTIAAGATFVGAAVRDGRTLIVSLL--RTAPTYA 317

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKD 279
             + +LL  GF +  D + +  + + 
Sbjct: 318 TDAKALLDWGFAHAADVRPLGRLAEP 343


>gi|148379813|ref|YP_001254354.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|148289297|emb|CAL83393.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|322806091|emb|CBZ03658.1| penicillin-binding protein DacC [Clostridium botulinum H04402 065]
          Length = 378

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  + L   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKIALRELLYGLMLRSGNDAAIAIAEGIAGSVEGFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYHNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTRGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|291527816|emb|CBK93402.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale M104/1]
          Length = 465

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 110/326 (33%), Gaps = 24/326 (7%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            +         P   +++ NTG V+ E        PAS+TK++T Y+     K  + +  
Sbjct: 24  TYWPEGPQINSPCAVVMEVNTGTVLYEKNSHEKHYPASITKILTTYLTILNCKMDEKVTF 83

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +   + +++           +  TM       +     + A   A    + L      F+
Sbjct: 84  SKEAVKESSDGSSSIKRDVGEEMTMEQTLYGVMLESANECAYAAAEHTGKKLGGDYSTFI 143

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--------------F 181
             MN  +K LG + THF NA+G+    H+T+A DM ++S     +               
Sbjct: 144 DMMNKEAKELGCTDTHFNNANGLPDENHWTSAYDMGLISCAAYRNDEFRKITGTKTYIIP 203

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P   H             +P  +++        G KTG+T  +   +V  A +   +L A
Sbjct: 204 PTNKHTEDTPLYNHHAMLHPFKSYSQFVNHDCTGGKTGYTSVANSTLVTYAEKDGLTLCA 263

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKIN-------YIIKDFYQQNLSNEVPNISE 294
           VI+ A   +     + +LL+  F N                   D    N        SE
Sbjct: 264 VIMNAQSPDQ-YADTNTLLNYYFSNFKALSIAENENSAATDNTPDLGVMNEHGMYAKGSE 322

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHF 320
                       + + + A  K  + 
Sbjct: 323 NYVVLPNNADFSSIKREAADMKSDNK 348


>gi|168180079|ref|ZP_02614743.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226948683|ref|YP_002803774.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|182669152|gb|EDT81128.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum NCTC 2916]
 gi|226843155|gb|ACO85821.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A2 str. Kyoto]
          Length = 424

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 136/339 (40%), Gaps = 15/339 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I  + + SN+F      +   T        +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFILTLTSNVFAAGDSNTEPPTIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND+A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPQYSLNINLHPIDIGETIKAENVMDGLLLFSGNDVAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   MN   + L L  THF+  +G+    HYTTA D++++S     + 
Sbjct: 131 MIGDALAGNNKNFENMMNKKIQELNLKNTHFVTPNGLHNPNHYTTAYDLSVISRAALKNP 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       N+N  +G   G    KTG+T A+G  +V    +  +
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMAIENSNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDGR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ V++G+      +   +    ++   +  K     +K  +   +      L    P+
Sbjct: 250 KILGVVMGSVYDAKDSFVFQDMKKIIDWSYNVKPSTLYKKDSSLKTETVTYNPLKIIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFEKITLL 329
           ++ +V    KE +  Y  ++ + +  ++  ID      L
Sbjct: 310 VTIDVPIILKEDVTYYKNEVNDKEANKTINIDNTSYAAL 348


>gi|331086847|ref|ZP_08335924.1| hypothetical protein HMPREF0987_02227 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410013|gb|EGG89448.1| hypothetical protein HMPREF0987_02227 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 557

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/333 (20%), Positives = 132/333 (39%), Gaps = 24/333 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN                 ++D N+G ++     D    PAS+TK+MTA V     +   
Sbjct: 114 SNALKNWPEGPGIFAEAGIIMDMNSGAILYAKNIDEKEFPASITKIMTALVALENSE--- 170

Query: 74  AMLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             LT  +  ++      EY  ++   + G  +T+++AL  +++ SAN+++ AIA+++   
Sbjct: 171 --LTDKVHFTEESVAFLEYGDASIGMQPGEEITMEDALYGMLLASANEVSYAIADTVGNG 228

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              F++ MN  ++ LG + THF N HG+    HY +ARDMA+++        ++      
Sbjct: 229 YDNFIRMMNEKAEELGCTNTHFTNPHGLHDEEHYVSARDMALIAS-AAFQHEEFRKITNT 287

Query: 191 KGLEIKGKKYPNTNWAVG------------TFLGADGMKTGFTCASGFNIVASAIQGDQS 238
               I      N                   +    G KTG+T  +   +V+    G+  
Sbjct: 288 YEHRIPPTNLVNEERVFQQYHQMLYDGTDTFYEPCVGGKTGYTDQALSTLVSYLDNGELQ 347

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC- 297
           L++V L     +     + ++    F N          +    ++   +    + + V  
Sbjct: 348 LVSVNLKTHGVHV-YPDTKNMAEYVFNNFKKIPLEGKDLPKGVKETEEDAYIVVPKNVEF 406

Query: 298 -TTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
              + EI+  +   K  K   ++  D + + + 
Sbjct: 407 QDVKAEIVPEDKSGKSKKGTLTYTYDGQTVGVS 439


>gi|225570111|ref|ZP_03779136.1| hypothetical protein CLOHYLEM_06207 [Clostridium hylemonae DSM
           15053]
 gi|225161581|gb|EEG74200.1| hypothetical protein CLOHYLEM_06207 [Clostridium hylemonae DSM
           15053]
          Length = 454

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 112/312 (35%), Gaps = 22/312 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++  TG ++     D    PAS+TK++TA V     +       T  
Sbjct: 64  PKGPATYGEAGIVMEVGTGAILYAKNIDEHEFPASITKVLTALVALENGQ--LTDEVTFT 121

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV----AIAESLCKTEKKFVQ 136
             S    +   S+   K+G  ++LD AL   ++ SAN+ A     ++  +       F++
Sbjct: 122 HDSVAFLQPGDSSIGMKEGDVISLDEALHATLLASANEAAYAVGESVGRNAGHDYNWFLE 181

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM-----AILSWRIKTDFPQYMHYFQIK 191
            MN   K LG   +HF N +G+    HYT ARDM      +       D  Q ++Y    
Sbjct: 182 QMNARCKELGGENSHFANTNGLHDENHYTCARDMALIGRELFKHPEFFDIVQTLNYAIPA 241

Query: 192 GLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
               +   +   +          +  A G KTG+T  +   ++  A +    L+ V+L  
Sbjct: 242 TDTCEEHIFQQKHKMLIPGNSNYYEYAVGGKTGYTSDALSTLITMAEKDGVRLVCVVLRT 301

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
              N     + +LL  GF N                    + + +   +      E I +
Sbjct: 302 HGSNI-YSDTKNLLDYGFSNFKKTAASGEEDS-----KDVDSIIDSDGDGYVMLPEGIKF 355

Query: 307 NTQMKEAKDKES 318
                + K  E+
Sbjct: 356 KDLDMKLKADEN 367


>gi|168184525|ref|ZP_02619189.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|237795257|ref|YP_002862809.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum Ba4 str. 657]
 gi|182672383|gb|EDT84344.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|229261495|gb|ACQ52528.1| putative D-alanyl-D-alanine carboxypeptidase DacB [Clostridium
           botulinum Ba4 str. 657]
          Length = 378

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  +TL   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKITLRELLYGLMLRSGNDAAIAIAEGIAGSIEGFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYQNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICAKGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|47570508|ref|ZP_00241136.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
 gi|47552816|gb|EAL11239.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
          Length = 423

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|228961651|ref|ZP_04123259.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798001|gb|EEM45006.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 423

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 78/332 (23%), Positives = 126/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N I     +++     P     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKDPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K T + +   +
Sbjct: 343 KIGTELDKSLSEDGHLVAPIKKDTKVGSITLE 374


>gi|196045526|ref|ZP_03112757.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           03BB108]
 gi|225867373|ref|YP_002752751.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           03BB102]
 gi|196023733|gb|EDX62409.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           03BB108]
 gi|225787013|gb|ACO27230.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           03BB102]
          Length = 423

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKNVKVGSITLE 374


>gi|148379380|ref|YP_001253921.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153934047|ref|YP_001383756.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|153936557|ref|YP_001387306.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. Hall]
 gi|148288864|emb|CAL82948.1| putative D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           A str. ATCC 3502]
 gi|152930091|gb|ABS35591.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|152932471|gb|ABS37970.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A str. Hall]
          Length = 424

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 15/339 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I  + + SN+F      +   T        +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFILTLTSNVFAAGDSNTEPPTIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND+A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPQYSLNINLHPINIGETIKAENVMDGLLLFSGNDVAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   M+   + L L  THF+  +G+    HYTTA D++++S     + 
Sbjct: 131 MIGDALAGNNKNFENMMSKKIQELNLKNTHFVTPNGLHNPNHYTTAYDLSVISRAALKNP 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       N+N  +G   G    KTG+T A+G  +V    +  +
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMAIENSNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDGR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ V++G+      +   +    ++   +  K     +K  +   +      L    P+
Sbjct: 250 KILGVVMGSVYDAKDSFVFQDMKKIIDWSYNVKPSTLYKKDSSLKTETVTYNPLKIIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFEKITLL 329
           ++ +V    KE +  Y  ++ + +  ++  ID      L
Sbjct: 310 VTIDVPIILKEDVTYYKNEVNDKEANKTINIDNTSYAAL 348


>gi|229105975|ref|ZP_04236597.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228677459|gb|EEL31714.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 423

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 128/332 (38%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N+ +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANDHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKIIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +  +  N NW        + G+DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PRPIRMENWNWMLPGAAFAYEGSDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S +L+  GF +   +K            +           +E+    K+      
Sbjct: 283 ERFTESRALIEYGFNSFEKQKLKIDKNNTISVVKGKADQVTVAPEKEITVIAKKGDKSPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + + + +
Sbjct: 343 KISTEADKSLAEDGHLIAPIKKDTKVGSIVLE 374


>gi|210621813|ref|ZP_03292842.1| hypothetical protein CLOHIR_00787 [Clostridium hiranonis DSM 13275]
 gi|210154577|gb|EEA85583.1| hypothetical protein CLOHIR_00787 [Clostridium hiranonis DSM 13275]
          Length = 420

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 34/359 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +++   I+   +        +                 L+D  TG VI    PD     A
Sbjct: 5   LKKLTAIMLAVLFVIPATGYAAEAKKKPVVEIYSKNSILVDQKTGRVITSKEPDKQVPLA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S++K+MT YV    +K  +      +TI K   +   S    K+G  +  +  LK L++ 
Sbjct: 65  SISKVMTFYVAQDAIKNGEVKKDDLVTIDKKMLKVSGSTMHLKEGEKVKFNELLKGLMIV 124

Query: 115 SANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GH 163
           SAND AVAIA  +CK     FV  MN  +K LG+  T+F+N +G+  +           +
Sbjct: 125 SANDGAVAIASHVCKGDVDAFVDRMNAKAKELGMKNTYFINPNGLPIYDWTKKDGDPKQN 184

Query: 164 YTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           ++TARD+A ++  +  D+ +        ++     +   Y NTN  +      DG+KTG+
Sbjct: 185 HSTARDIATMTKNLLDDYEEETIAITDCKLDHAPSRDCNYYNTNPLLHMHSNVDGLKTGY 244

Query: 221 TCASGFNIVASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           T  +G+ +V +           D  +I V++G   +  R + + +L ++G  N   +   
Sbjct: 245 TDLAGYCLVFTDKMNSDGKSDMDNRMIGVVMGNWCKEDRVRSANALYNLG-ENFETKLMC 303

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                       +  + NIS+      +   +    +K  +D  +  + + KI    N+
Sbjct: 304 KKGETVA-----TGNIDNISDLDNIDLQPKRDCYGVVKNNEDI-TEKVRYVKIDATPNE 356


>gi|196041013|ref|ZP_03108310.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           NVH0597-99]
 gi|196028181|gb|EDX66791.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           NVH0597-99]
          Length = 423

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|295109007|emb|CBL22960.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 415

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 105/249 (42%), Gaps = 12/249 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++ +TG V+     +     AS TK+MT  +           L   +T SK
Sbjct: 171 NLSSDCALLINADTGKVLYSKNENLRHANASTTKIMTCILALENS-----SLNDKVTFSK 225

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+   PS    K G T  + + L  L+V S ND A+AIAE +  +   F Q MN  ++ 
Sbjct: 226 KAASVEPSKLYAKAGETFYMRDLLYSLMVPSHNDTAIAIAEHISGSTSAFAQLMNKKARE 285

Query: 145 LGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYMHYFQIKG-----LEIKGK 198
           LG + THF+  +G+     HYTTA D+AI++     +                    +  
Sbjct: 286 LGCTNTHFVTPNGLDAGLNHYTTASDLAIIARYAIQNPTFQKLINTKSYSFKSLNTKRYF 345

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILGALDRNTRNKVSA 257
               TN  +GT  G  G+KTG T  +G+  V     +   + I+V LG      R + S 
Sbjct: 346 TVATTNALLGTQTGVVGLKTGVTNKAGYCFVGLCRSRKGNTYISVTLGGPTSAARWRDSK 405

Query: 258 SLLSMGFYN 266
            LL+  +  
Sbjct: 406 ILLTYAYKK 414


>gi|229158950|ref|ZP_04287007.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228624561|gb|EEK81331.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
          Length = 423

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 124/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                +    ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKSRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|227509080|ref|ZP_03939129.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227191467|gb|EEI71534.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 421

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/344 (18%), Positives = 124/344 (36%), Gaps = 34/344 (9%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +            +D +TG ++ E     P   AS++KLMT Y+V   ++E K  
Sbjct: 27  AATVSTSQPVIYAKSAIAVDADTGQILYEKNAHQPLAIASISKLMTVYIVRKQIQEGKLS 86

Query: 76  LTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               + IS   ++   ++           +  + + +K  ++ SAN  A+A+ + +    
Sbjct: 87  WNDQVKISPAVAKLSTASGLTNVPLKSGKSYKVRDLVKAALIVSANAAAIALGQKVSGNA 146

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRI 177
           + F   M  T++ LG+    F NA G+                  +  +A+D+A+L+ R+
Sbjct: 147 QNFADKMTKTARGLGIKDAKFYNAAGLTNKLTGSLMLKKDSPNAENLMSAKDIALLASRL 206

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  FP          +   G  Y   N       +      +G+KTG +  +G     SA
Sbjct: 207 EESFPGLTKITGQTQMTFAGNSYAGHNQLLDDRQIAKGAVVNGLKTGTSDEAGACFAGSA 266

Query: 233 IQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINY------IIKDFYQ 282
               + ++ V+LGA         R   +A L+ + F+ +   K   +             
Sbjct: 267 TYHGRRIVTVVLGARNNSATDPARFIQTAKLMGIVFHKQHPVKLAKHVHISGLGTTKVPD 326

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQM-KEAKDKESHFIDFEK 325
             L+       +       + I+ N    K  K  +      +K
Sbjct: 327 GKLTKTKLVTKKTTWVWVPKSISQNQVKGKFVKTPKKINAPVKK 370


>gi|160892713|ref|ZP_02073503.1| hypothetical protein CLOL250_00243 [Clostridium sp. L2-50]
 gi|156865754|gb|EDO59185.1| hypothetical protein CLOL250_00243 [Clostridium sp. L2-50]
          Length = 451

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 28/294 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   LLD   G V+ +   +     AS TK++T  +   +           + +S 
Sbjct: 82  DLHALSAILLDGKNGRVLYDKAGEEVRANASTTKILTCILALEY-----GDPDDIVIVSS 136

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A++ P      ++G    L + L  L+++S ND AVAIAE +  + + F   MN  +  
Sbjct: 137 YAAKMPDVQLNIREGEEYRLKDLLYSLMLESHNDSAVAIAEYIGGSVEAFADLMNRKAIE 196

Query: 145 LGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----- 195
           +G + THF+  +G+        H TTA D+A +      + P+   +  I          
Sbjct: 197 VGCTNTHFITPNGLDAKDEYGIHGTTAEDLARIMRYCIRESPKREQFLAITRTATYSFTN 256

Query: 196 ----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +     N N  +    GA   KTGFT ++G+  V +  +  + LI  +LG      
Sbjct: 257 VGGTRSFSCSNHNAFLNMMDGALTGKTGFTGSAGYCYVGALERDGKILIVALLGCGWPGN 316

Query: 252 R---NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           +      +  L++ G  N  +    + I++        N++P +S+ V  T KE
Sbjct: 317 KTYKWADTKKLMNYGLANYQEHVITDDILQ-------KNKIPVLSDSVYGTIKE 363


>gi|301056857|ref|YP_003795068.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis CI]
 gi|300379026|gb|ADK07930.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 423

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKNPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|218906570|ref|YP_002454404.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           AH820]
 gi|300117906|ref|ZP_07055673.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus SJ1]
 gi|218534840|gb|ACK87238.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           AH820]
 gi|298724770|gb|EFI65445.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus SJ1]
          Length = 423

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKNPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|206973720|ref|ZP_03234638.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|217960011|ref|YP_002338567.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|222096095|ref|YP_002530152.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|229139202|ref|ZP_04267777.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
 gi|206747876|gb|EDZ59265.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|217064880|gb|ACJ79130.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|221240153|gb|ACM12863.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|228644261|gb|EEL00518.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
          Length = 338

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++   +++ +    F         +     L+D ++G V+     + P   A+L
Sbjct: 4   LKKFTILLLSFVITALIVLYFYLYVNGPIIQAKSAILIDAHSGEVVYTKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E    L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYITLEQLNEGTIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHTLLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E KF Q MN  +K+L    ++ F+NA G+    +    TTA ++A 
Sbjct: 124 NRSALALAEHIAGNEDKFTQLMNEKAKHLKLSQSSPFLNATGMNNDTNKLSTTTAIEVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++       K  K  NTN  +          G DG++T F+   
Sbjct: 184 LATQLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAKRGDTRLISVILDADNENSTFIETKKLLQYGFD 284


>gi|170760715|ref|YP_001786794.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407704|gb|ACA56115.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 422

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 70/332 (21%), Positives = 134/332 (40%), Gaps = 15/332 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I  + + SN+F      +            +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFILTLTSNVFAAGDSNTEPPAIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND+A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPQYSLNINLHPIDIGETIKAENVMDGLLLFSGNDVAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   MN   + L L  THF+  +G+    HYTTA D++++S     + 
Sbjct: 131 MIGDALAGNNKNFENMMNKKIQELDLKNTHFVTPNGLHNPNHYTTAYDLSVISRAALKNP 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       N+N  +G   G    KTG+T A+G  +V    +  +
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMTIENSNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDGR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ +++G+      +   +    ++   +  K     +K  +   +      L    P+
Sbjct: 250 KILGIVMGSVYDAKDSFVFEDMKKIIDWSYNAKPSTLYKKDSSLKTETVTYNPLKIIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFID 322
           ++ +V    KE +  Y  ++ + +  ++  ID
Sbjct: 310 VTIDVPIILKEDVTYYKNEVNDKEANKTINID 341


>gi|191637034|ref|YP_001986200.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus casei BL23]
 gi|190711336|emb|CAQ65342.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus casei BL23]
 gi|327381061|gb|AEA52537.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus casei LC2W]
 gi|327384236|gb|AEA55710.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus casei BD-II]
          Length = 436

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 130/384 (33%), Gaps = 55/384 (14%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPD 48
           M++ +      ++A+ M+    P +S++                 ++  TG ++      
Sbjct: 1   MKKLMRGLIAAVVAVLMIGGAAPAMSVSAAESSDTNLVDAKAAVAIEPTTGKILYAKNAS 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTP----ITISKNASEYPPSNSTFKKGSTMTL 104
                AS+TK+++  +V   +K  K            I + +     SN   ++  + ++
Sbjct: 61  SVLPIASMTKMLSIELVLDAIKSGKINWDDKVTLNNAIWELSQNRDLSNVPLRRDGSYSV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
                  ++ SAN   + +AE +  +++KFV  M     + G++    +N  G+      
Sbjct: 121 RELYDASLIYSANAAMMLLAEKVAGSQEKFVSQMTAKLNSWGITDAKIVNVTGLNNSQLK 180

Query: 159 --------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW 205
                       +  +A+DMA ++  +  D P+ +    I     +          N NW
Sbjct: 181 DAKVPGTDDNAENEMSAKDMAQVAQHLLKDHPEVLKTTSIAKQTFRKGTSDAIDMENWNW 240

Query: 206 A------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSA 257
                      L  DG+KTG + A+G     +  +    +I VIL A    +  R   + 
Sbjct: 241 MLKGLVSYDKDLPVDGLKTGTSDAAGDCFTGTVEKNGMRIITVILHANGDAKTRRFDQTK 300

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSN------------EVPNISEEVCTTQKEIIN 305
            L++    N                 ++                  ++     + K+ + 
Sbjct: 301 KLMTNVLENWKTMTLAEAGQGIKGYDSVKVNRGQSRTTPIAPSTKAVAVVPSNSSKQSLQ 360

Query: 306 YNTQMKEAKDKESHFIDFEKITLL 329
           Y     +   K +     +K T +
Sbjct: 361 YTYTPAKGVKKNTVEAPVKKGTTI 384


>gi|307243482|ref|ZP_07525633.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493126|gb|EFM65128.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           stomatis DSM 17678]
          Length = 655

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 81/351 (23%), Positives = 129/351 (36%), Gaps = 32/351 (9%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A A L +     S  +T K  Y  L+D N+G V+ +        PAS TK+ TA+ V 
Sbjct: 17  LLAPASLISHADQTSDLDTLKSKYMVLMDYNSGQVLYKKNATQKMYPASTTKIWTAFCVL 76

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
              K     L   + I         S            +    LLI  S +   V     
Sbjct: 77  KKAK----NLDELVEIKDIPQIEGSSMYLENGEKFTVRELLESLLIHSSNDVAYVLAKHF 132

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
                + F+ +MN  +K  G S THF N HG+    HYTTA DMAILS     D      
Sbjct: 133 GGGNPQDFINYMNEEAKKFGASNTHFNNPHGLPDTDHYTTAMDMAILSRVAYGDPTIS-E 191

Query: 187 YFQIKGLEIK-------GKKYPNTNWA--------------VGTFLGADGMKTGFTCASG 225
             ++K +  K        +   N+N                   +   DG+KTGFT  +G
Sbjct: 192 IVKMKSVSFKASDRIKVERNLVNSNKFLTSSDTIDHKGKTIPIKYDIVDGIKTGFTDDAG 251

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN----YIIKDFY 281
             +V++A +G+  L+A +  A    +    S +L+  G  N               K   
Sbjct: 252 NCLVSTAKKGNVRLMANVFFAPGG-SLYHDSRTLIDYGLDNYKSITIYKADDIKGEKSVK 310

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK-DKESHFIDFEKITLLKN 331
                     ++ +   T  +  + NT+    K + +   +  +K  ++  
Sbjct: 311 FARPGKIKYKLANDYSITAMKTDSSNTKGYTYKYNFDKLEMPVKKGDIIGT 361


>gi|326792977|ref|YP_004310798.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
 gi|326543741|gb|ADZ85600.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
          Length = 432

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 121/344 (35%), Gaps = 17/344 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ + ++    +  I P      T +     L++  T  ++ E      + PAS+TKL+
Sbjct: 1   MKKSVYVLTFLFILCISPSFLAKPTVEARGAILIEAKTNTILYEKNAYSKFYPASITKLL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  ++   L E   +  T    S N      S    K G +    N L  L++ S N IA
Sbjct: 61  TTLIIEEQLSENHII--TKSQNSVNTIPKDSSEIGLKIGDSYNKVNGLYGLLLGSDNFIA 118

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
             +A +   +   F + MN  +K LG   THF N HG     HYTT  DMA ++     +
Sbjct: 119 HDLALAHSGSISNFAELMNTRAKALGAKNTHFTNPHGYHDPNHYTTPYDMAQIAKGAFDN 178

Query: 181 FPQYM-----HYFQIKGLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVA 230
                      +      + K     NT+                 KTG+   +G  +VA
Sbjct: 179 PTVQKIAGTAQFNFYVNNKNKYIPIKNTSRLLKSETPYYNPAVVACKTGYHSDAGQTLVA 238

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
            A+ GD  LIA ++     N        L             +      +  +N +    
Sbjct: 239 KAVYGDMELIAAVMYEKTPNQ-YIDVNKLFDYA----KTYYGVEQKSDIYTLKNKTITPW 293

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +        +K   N  T   +    E      +K+    N IT
Sbjct: 294 SEPSITRAVEKGWANNATNYNDTIYTEDLVAMLKKVGASYNGIT 337


>gi|167898320|ref|ZP_02485721.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 7894]
          Length = 276

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 7/239 (2%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +    + ++           A           + ++D ++G  +  +  D    PASLTK
Sbjct: 27  RLFAALFVSAACAAPNGARAAPAPAPAIQAASWLVVDADSGKTLGAHNVDARREPASLTK 86

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKS 115
           LMTAYV F  L+         +T++ +                G  + + + ++ LIV S
Sbjct: 87  LMTAYVAFDALERDALRWDDTVTVAADDIASVGRDEARMYLTPGQRVRVRDLMRGLIVAS 146

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           AND A+ +A+ +  +   F   MN+T++ LG+  +HF++  G+    HY+TA D++IL+ 
Sbjct: 147 ANDAALVLAKRIGGSPAGFATMMNDTARRLGMRDSHFVSPSGITTPDHYSTAHDLSILAQ 206

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
           R+  DFP +  +   +          N N  +G     DGMKTG T A+G+ +V +A +
Sbjct: 207 RLNRDFPAFYTFSSQRHFAYGAFAKTNKNRLLGADPSVDGMKTGHTNAAGWCMVVTAKR 265


>gi|229051059|ref|ZP_04194606.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|228722270|gb|EEL73668.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
          Length = 434

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 124/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 54  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 113

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 114 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 173

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 174 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 233

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 234 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 293

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 294 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVTPEKEITVIAKKGSKEPY 353

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 354 KIGTELDKSLSEDGHLVAPIKKDTKVGSITLE 385


>gi|206891061|ref|YP_002249135.1| D-alanyl-D-alanine carboxypeptidase [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742999|gb|ACI22056.1| D-alanyl-D-alanine carboxypeptidase [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 342

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 14/270 (5%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAE-----TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +F+  I    +    P     E         P    +D  TG V+    P     PAS T
Sbjct: 17  RFMCFILFIYVLVYSPEALAQETKKQVDIDAPSAVAVDAQTGKVLYGKNPHIKLPPASTT 76

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL+T  V               +TIS+ A+  P  +    +G    + + + L +++S N
Sbjct: 77  KLVTVMVALEK-----LDPEHKVTISRKAARTPSVSPKLVEGEVYKVRDLVYLALMRSVN 131

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR- 176
             AVA+AE+    E+ FV+ MN+  + +G   T F+NA G+   G YTT  D+  +    
Sbjct: 132 SAAVALAEATAGREENFVKLMNDKVQKIGAKDTRFINASGLPGAGQYTTVYDLTKIMSHA 191

Query: 177 ---IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                     +   + I+    K     NTN  +       G KTG+T  +    V++  
Sbjct: 192 LAYPLIKEAVHTRVYLIRSENGKEHFIQNTNQLLWAEDNMIGGKTGYTRRARHCFVSAYK 251

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMG 263
              + +   ILG  +R    K +  L+   
Sbjct: 252 VNGRLVYTAILGDTNREQLWKDTQQLVEKA 281


>gi|30265411|ref|NP_847788.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus anthracis
           str. Ames]
 gi|47530965|ref|YP_022314.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188225|ref|YP_031478.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis str.
           Sterne]
 gi|165871278|ref|ZP_02215927.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0488]
 gi|167635722|ref|ZP_02394032.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0442]
 gi|170688221|ref|ZP_02879432.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0465]
 gi|170708041|ref|ZP_02898489.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0389]
 gi|190568901|ref|ZP_03021803.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227818157|ref|YP_002818166.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. CDC 684]
 gi|229601349|ref|YP_002869603.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0248]
 gi|254687169|ref|ZP_05151027.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. CNEVA-9066]
 gi|254724048|ref|ZP_05185833.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A1055]
 gi|254742225|ref|ZP_05199912.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. Kruger B]
 gi|254755864|ref|ZP_05207896.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. Vollum]
 gi|254761576|ref|ZP_05213596.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. Australia 94]
 gi|30260089|gb|AAP29274.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. Ames]
 gi|47506113|gb|AAT34789.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49182152|gb|AAT57528.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus anthracis
           str. Sterne]
 gi|164712945|gb|EDR18473.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0488]
 gi|167528831|gb|EDR91588.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0442]
 gi|170127014|gb|EDS95893.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0389]
 gi|170667914|gb|EDT18666.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0465]
 gi|190559968|gb|EDV13951.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006453|gb|ACP16196.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. CDC 684]
 gi|229265757|gb|ACQ47394.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0248]
          Length = 423

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNTDLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N +     +++     P     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVAQGKEDQVTVAPEKEITVIAKKGSKNPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|312140773|ref|YP_004008109.1| d-alanyl-d-alanine carboxypeptidase [Rhodococcus equi 103S]
 gi|311890112|emb|CBH49430.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus equi
           103S]
          Length = 444

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 107/337 (31%), Gaps = 29/337 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + L D +TG V+A   P   + PAS  K++ A V        
Sbjct: 106 VVTAPGTPPLPAEISATGWVLSDLDTGQVLAAKDPHGRYRPASTIKVLLALVALDE---- 161

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L T I  S  A+    S+     G T +    ++ L+++S ND A A+A+     E+
Sbjct: 162 -LDLDTTIVASPEAASMEGSSVGLGAGGTYSNLQLMQGLVMRSGNDAAQALAQ-QLGGEQ 219

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP---------- 182
             V  MN  + +LG S T   +  G+   G  T+  D+A+       +            
Sbjct: 220 ATVAKMNAKAASLGASDTRTASVSGLDGPGMSTSPYDLALFFRAAMQNPTFAGLITTDTV 279

Query: 183 ----QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                     +     +      N N  +  + GA G KTG+T  +    V  A +  + 
Sbjct: 280 MFPGHPADPTKPDDKPVDPYPIFNDNQLLANYPGALGGKTGYTDDARQTFVGGAERDGRR 339

Query: 239 LIAVILGALDRNTR-NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
           L   ++ A     R  +    LL  G+                            + +V 
Sbjct: 340 LAVTLMAADVLPIRPWEQVGRLLDYGWA--------LDPAVSVGVLVDPKGADEPAVQVA 391

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             +            +            I ++ + I 
Sbjct: 392 GPETHGPGGMDLASGSDLPNKEVAGRVAIGIVGSGIV 428


>gi|167640402|ref|ZP_02398666.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0193]
 gi|177651865|ref|ZP_02934448.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0174]
 gi|254735510|ref|ZP_05193217.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. Western North America USA6153]
 gi|167511622|gb|EDR87004.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0193]
 gi|172082569|gb|EDT67633.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A0174]
          Length = 423

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 73/332 (21%), Positives = 121/332 (36%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNTDLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            R   S  L+  GF N   +K                +   ++ E   T           
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVAQGREDQVTVAPEKEITVIAKKGSKNPY 342

Query: 311 KEAKDKES-------HFIDFEKITLLKNKITK 335
           K   + +             +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|229153550|ref|ZP_04281728.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
 gi|228630154|gb|EEK86805.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
          Length = 434

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 124/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 54  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 113

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 114 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 173

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 174 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 233

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 234 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 293

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 294 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 353

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 354 KIGTELDKSLSEDGHLVAPIKKDTKVGSITLE 385


>gi|49481295|ref|YP_039380.1| D-alanyl-D-alanine carboxypeptidase (serine-type D-Ala-D-Ala
           carboxypeptidase) [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|228930397|ref|ZP_04093398.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228949115|ref|ZP_04111385.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|49332851|gb|AAT63497.1| D-alanyl-D-alanine carboxypeptidase (serine-type D-Ala-D-Ala
           carboxypeptidase) [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|228810556|gb|EEM56907.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228829244|gb|EEM74880.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 423

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N +     +++     P     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVAQGKEDQVTVAPEKEITVIAKKGSKNPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|260437596|ref|ZP_05791412.1| serine-type D-Ala-D-Ala carboxypeptidase [Butyrivibrio crossotus
           DSM 2876]
 gi|292809949|gb|EFF69154.1| serine-type D-Ala-D-Ala carboxypeptidase [Butyrivibrio crossotus
           DSM 2876]
          Length = 443

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 62/288 (21%), Positives = 112/288 (38%), Gaps = 24/288 (8%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M++ +   +    +         A            K  Y  L+D ++G V+ +   D  
Sbjct: 1   MKKIIASTLTFIYIMCHLSLCRAADNNDILPEFPDIKSQYIVLMDADSGEVLYQRNMDKK 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS TK+MTA +          +  +   +  ++     +N     G  +T++ +L  
Sbjct: 61  CYPASTTKMMTALLTIENTSMSDVVTYSKAAV--DSVSPGDANVGIAVGEQLTVEQSLYC 118

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L+++SAND+A  +AE +  T   F   MN+ +  LG  +THF N  G+    HY+T  DM
Sbjct: 119 LMLRSANDVAYGLAEYVGGTASGFASMMNDKAAALGAVSTHFSNPSGLTNEFHYSTPYDM 178

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-----------GTFLGADGMKTG 219
           A++      +             +I      N                  +  + G KTG
Sbjct: 179 ALIGRACFNNKTLVNIMSYTGVYKIGKTNTNNNIRYYTHRFQMLKGGEYEYRYSKGGKTG 238

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
           +T A+G  +V+ A +    L+  ++ +   + R   S +L      N 
Sbjct: 239 YTDAAGNCLVSFAEKDGIRLVCSVMNS-TASGRYTDSIALFDYYLNNY 285


>gi|153811609|ref|ZP_01964277.1| hypothetical protein RUMOBE_02001 [Ruminococcus obeum ATCC 29174]
 gi|149832350|gb|EDM87435.1| hypothetical protein RUMOBE_02001 [Ruminococcus obeum ATCC 29174]
          Length = 414

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 21/272 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                 +     L+D  TG V+     D    PAS+TK+MTA +       +K   +   
Sbjct: 66  VKGPQIEGESAILVDMFTGAVLYSKNADKTQYPASITKIMTALL-----GCEKLNPSQKF 120

Query: 81  TIS----KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            ++    ++ +E   S+         T++ AL  ++++SAN++ +A+AE    + KKFV+
Sbjct: 121 AMTASAARSITETNSSSIYADTDEEFTIEQALMAVMLQSANEMTLAVAELTSGSTKKFVE 180

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP------QYMHYFQI 190
            MN  ++ LG + THF N +G+    HYTTA DMA ++     +           +    
Sbjct: 181 QMNLKARQLGCTNTHFNNPNGLPDEIHYTTASDMAKIARAAWFNPTFRKFASTQYYEIPP 240

Query: 191 KGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                + +   N +  +      + G  G KTG+T A+G  +V  A   +  L++V+L  
Sbjct: 241 TNKFAETRYLLNHHKMMKNQAYAYNGVLGGKTGYTEAAGNTLVTYAKNDNTYLVSVVL-- 298

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
              N     + +LL  GF N +     +   K
Sbjct: 299 QSVNGAYSDTKALLDYGFNNFSRTAVKDLPSK 330


>gi|228942535|ref|ZP_04105070.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228982101|ref|ZP_04142393.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228777639|gb|EEM25914.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228817128|gb|EEM63218.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326943187|gb|AEA19083.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 423

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 121/332 (36%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAES----LCKTEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +    L ++EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAESEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKVMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            R   S  L+  GF N   +K                +   ++ E   T           
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKDPY 342

Query: 311 KEAKDKES-------HFIDFEKITLLKNKITK 335
           K   + +             +K   + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPVKKDAKVGSITLE 374


>gi|229112801|ref|ZP_04242333.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|228670635|gb|EEL25947.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
          Length = 434

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 124/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 54  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 113

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 114 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 173

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 174 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 233

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 234 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 293

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 294 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 353

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 354 KIGTELDKSLSEDGHLVAPIKKDTKVGSITLE 385


>gi|319945575|ref|ZP_08019827.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
           ATCC 700641]
 gi|319748174|gb|EFW00416.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
           ATCC 700641]
          Length = 413

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 66/348 (18%), Positives = 137/348 (39%), Gaps = 30/348 (8%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
            P  +        +   +D  TG ++ E   D       ++ L+T Y+V+  +++ K  L
Sbjct: 19  SPVKAEDLDLGAQHAIAIDGTTGKILYEKNSDEKKEVGGISNLLTTYLVYEAIQQGKISL 78

Query: 77  TTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
           T  + IS  A +       ++   +     + + L  L+V +AN  A+A+AE +  +E+K
Sbjct: 79  TDDVDISDKAYQLTAIEGISNVPMEARKYKVKDLLTALLVSNANSAAIALAEKVAGSEEK 138

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVV-------------QHGHYTTARDMAILSWRIKTD 180
           FV  M    K  G++    +NA G+               + +  +A D+A+++  +  D
Sbjct: 139 FVLLMKAKLKEWGITDATIVNASGLNQSIIDGDEENKKKNNENKLSAYDVAVIAKHLLED 198

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQGD 236
           +P+      +   E  G +  ++N+ +        G DG+KTG +   G + VAS  Q  
Sbjct: 199 YPEVTKITSLSHAEFAGIQLESSNYMLENMPNYRAGVDGLKTGNSEKGGISFVASTNQNG 258

Query: 237 QSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------DFYQQNLS 286
             +I V++G      D   R   +A+L++    N      ++                 +
Sbjct: 259 IRMITVVIGVEAIDGDPYARFVTTANLMNYVSQNFVANLIVSKGETYNNSKSTVLDGKKT 318

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           + +    ++    +++      ++     + S     +K T L     
Sbjct: 319 SVIAVAKDDFIVIERQGSQTEPKITFKSSQASFSAPLKKGTSLGILTY 366


>gi|228955638|ref|ZP_04117636.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804007|gb|EEM50628.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 423

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGASFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|158317707|ref|YP_001510215.1| Serine-type D-Ala-D-Ala carboxypeptidase [Frankia sp. EAN1pec]
 gi|158113112|gb|ABW15309.1| Serine-type D-Ala-D-Ala carboxypeptidase [Frankia sp. EAN1pec]
          Length = 465

 Score =  137 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 12/264 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +          + + D  +G ++A +    P  PAS  K++TA  V              
Sbjct: 1   MPPPAGITAEAWLVADAGSGAILAAHNAHLPDLPASTMKMLTALTVLP-----GLPPDRE 55

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +TIS  A++   +      G   T+ +    +++ S ND  VA+ E+     +  +  MN
Sbjct: 56  VTISDQAAQVDGTRVGLVPGVRYTVRDLATAMLIASGNDATVALVEAA-GGREAVLDRMN 114

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY----MHYFQIKGLEI 195
             + +LG S T   +  G+   G +TTA D+A++      D        +    + G   
Sbjct: 115 RLAASLGASETVAGDPTGLDAPGQHTTAHDLAVIGRATLNDPIVRGYLTIPRASLPGRGD 174

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           +  +  N N  +G++ G  G+K G+T A+G   V +A + D++LI  +L           
Sbjct: 175 ERFEIANHNTLIGSYEGTIGIKNGYTVAAGATFVGAATRNDRTLIVSLL--RTAPAYGTD 232

Query: 256 SASLLSMGFYNKTDRKKINYIIKD 279
           + +LL  GF +  D + +  +   
Sbjct: 233 ARALLDWGFAHAADVRPVGRLAGP 256


>gi|111023206|ref|YP_706178.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1]
 gi|110822736|gb|ABG98020.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1]
          Length = 431

 Score =  137 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++        + + D +TG V+A   P   + PAS  K++ A V  S        L  
Sbjct: 97  APALPADIAASGWVVADIDTGDVLAAKDPHGRYRPASTIKMLLALVALSE-----LDLDK 151

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T +   +    S     K    T    ++ L++ S ND A  +A      +   V  M
Sbjct: 152 TVTATAEDAAVEGSAVGIGKNGQYTNRQLMQGLVMASGNDAAHLLAR-QLGGDAATVDKM 210

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N+ +  LG   T      G+   G  ++  D+A++      +                  
Sbjct: 211 NHLADTLGAHDTRTATPSGLDGPGMSSSPFDLALIFHTAMKNPTFAELISTETVQFPGFP 270

Query: 199 K--------------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           K                N N  +  + GA G KTGFT  +    V  A    + L+  ++
Sbjct: 271 KDPAIPDDQDRPPFALANDNQLLYNYDGALGGKTGFTDDARHTYVGGADHDGRRLMVTLM 330

Query: 245 GALDRNTR-NKVSASLLSMGFY 265
           GA  +  R  + +A LL  GF 
Sbjct: 331 GAEAQPIRPWEQAARLLDYGFA 352


>gi|229099816|ref|ZP_04230740.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|228683562|gb|EEL37516.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 423

 Score =  137 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 128/332 (38%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N+ +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANDHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G+DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGSDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S +L+  GF +   +K            +           +E+    K+      
Sbjct: 283 ERFTESRALIEYGFNSFEKQKLKIDKNNTISVVKGKADQVTVAPEKEITVIAKKGDKSPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + + + +
Sbjct: 343 KISTEADKSLAEDGHLIAPIKKDTKVGSIVLE 374


>gi|294793071|ref|ZP_06758217.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella sp. 6_1_27]
 gi|294456016|gb|EFG24380.1| serine-type D-Ala-D-Ala carboxypeptidase [Veillonella sp. 6_1_27]
          Length = 300

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 11/258 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            S          +       L+D +T  ++    PD   +PAS TK++T          K
Sbjct: 44  ASVAQAAYITPPSTVGEAVVLIDADTKEILFAKNPDKWMHPASTTKMVTLLTALEL---K 100

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L    TIS  A+    SN   + G  +TL+  L+ ++V S ND A+ +AE++  +  
Sbjct: 101 GTQLDELATISSYATSMEESNLGVRVGDQITLEGVLEGMMVASGNDAAIVVAENVSGSVD 160

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYF 188
           KF + M   +   G   + F+N HG+ Q GH++TARD+A++                 Y+
Sbjct: 161 KFAKDMTRIAAKAGAKNSVFLNPHGLTQKGHHSTARDLAMIAAYGMKYQMFRDKVANDYY 220

Query: 189 QIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           ++       +    TN  +   + GA+G+KTGFT A+G  ++ASA +   ++I V+L   
Sbjct: 221 KVPYQNRAPETIRTTNHFIRNKYPGANGLKTGFTNAAGECLIASATRKGHTMIVVMLN-- 278

Query: 248 DRNTRNKVSASLLSMGFY 265
             + R   +   L  GF 
Sbjct: 279 -DDNRWDEAVQFLDYGFK 295


>gi|229193641|ref|ZP_04320584.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
 gi|228589794|gb|EEK47670.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
          Length = 423

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKTMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|226949097|ref|YP_002804188.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843082|gb|ACO85748.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum A2 str. Kyoto]
          Length = 378

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  +TL   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKITLRELLYGLMLRSGNDAAIAIAEGIAGSIEGFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYQNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTRGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|190576060|ref|YP_001973905.1| putative family S11 unassigned peptidase [Stenotrophomonas
           maltophilia K279a]
 gi|190013982|emb|CAQ47622.1| putative family S11 unassigned peptidase [Stenotrophomonas
           maltophilia K279a]
          Length = 264

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 10/255 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S A          LD  T  VI ++  D    PASLTKLMTAY  +  ++E+       
Sbjct: 2   PSPAPARAPLSSITLDAATFAVIHQHNADIARQPASLTKLMTAYAAYECVEERGRSWGDE 61

Query: 80  ITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +TI+ +                G T+TL   L+ L++ S ND A+AIA  L  ++  F++
Sbjct: 62  VTIAADDVHAVADDETRMGLVPGETVTLARLLEGLMIVSGNDAALAIARHLDGSQPAFLE 121

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LGL ++ F +  G+    H ++ARDMA+L+  +  D PQ +     +     
Sbjct: 122 RMNRHARQLGLRSSWFASVSGITTPHHASSARDMAVLAACLLNDHPQILAITAQRAFVHG 181

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG--DQ----SLIAVILGALDRN 250
                N N  +G   G DG+KTG+T A+GF + A+A +    +     LI V+LG+  R+
Sbjct: 182 SFSRNNQNALLG-DDGVDGLKTGYTQAAGFCLAATACRAVPGRDQPVRLITVVLGSESRD 240

Query: 251 TRNKVSASLLSMGFY 265
            R+ +    L+ GF 
Sbjct: 241 ARDALVRDQLAAGFA 255


>gi|315639990|ref|ZP_07895117.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus italicus DSM
           15952]
 gi|315484252|gb|EFU74721.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus italicus DSM
           15952]
          Length = 423

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 143/376 (38%), Gaps = 41/376 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +R +L++  +     + P +   E             +D++TG +  E     P + AS 
Sbjct: 5   IRIYLLLFCVIGSCVLAPVVQAQEETPLAIQAKAAIAIDSDTGKIFYEQDATTPLHIAST 64

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLI 112
           TKL++ Y+++  ++  K  +T  +TIS         +  SN    +G + ++ N ++   
Sbjct: 65  TKLLSMYIIYDQIRTGKLSMTDQVTISAETSALSQNWQLSNVLLYEGQSYSVKNLIEAGF 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ------------ 160
           ++SAN   +A+AE +  +E  FV  M       G++    + + G+              
Sbjct: 125 LESANAAVMALAEKVAGSEATFVDLMRAQLTTWGITDGTIVTSTGLNNAFLGDNRYPGSG 184

Query: 161 --HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNWAVGTF--- 210
               +  +A+D+AI++  +  DFP+ +       L             NTN  +      
Sbjct: 185 AEEENQLSAKDLAIVARHLLQDFPEVLQITSQSQLTFAEPTGENLELENTNQMLAGMAVA 244

Query: 211 -LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN--TRNKVSASLLSMGFYNK 267
             G DG+KTG T  +G   V +  +GD  LI V+L   D     R   SA ++   +   
Sbjct: 245 TDGVDGLKTGTTDLAGACFVGTVKRGDTRLITVVLDVTDATGIARFTESARMMEWVYSQW 304

Query: 268 TDRKKINYIIKDFYQQNLS-------NEVPNISEEVCTTQKEIINYNTQMKEAK-DKESH 319
             +      +    +Q +S            +  EV    K+ ++           K S 
Sbjct: 305 QQQTINGETLTIPKRQTISVKDGEQLKVAVGLDNEVTVWVKKGMDATNITVTPTFTKTSV 364

Query: 320 FIDFEKITLLKNKITK 335
               ++   +   + +
Sbjct: 365 TAPVKRGKQVGTAVIR 380


>gi|295110612|emb|CBL24565.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 417

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 106/271 (39%), Gaps = 18/271 (6%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+ +N                 +++ +T   +     D    P +  K+MT  +     +
Sbjct: 39  AISTNDIAGWPQGPDITSTAAVIMEDSTNTTLYAKNMDQVLYPGATVKVMTTLLALENTQ 98

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               +  T   +S        +N + +     T++  L  +++ SAND+A+ +AE +  +
Sbjct: 99  LSDQVTMTATGVS--GVTDGGANISAQIDEVFTVEQCLYAIMLASANDVALQLAEHIGGS 156

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FVQ MN  +  LG + T F N  G+     +TTA DMA++      +          
Sbjct: 157 VDGFVQMMNARAPELGCTNTVFTNPTGLPDENQHTTAHDMALIMKAAADNESFQTIASTT 216

Query: 191 -------------KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                        + L        NTN     +    G + G+T ASG  +V SA +   
Sbjct: 217 SYTIPATNVSGGDRVLTNNFSMLTNTNA--AYYQYCTGGREGYTEASGSTLVCSAQKNGI 274

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           +LIAV+L      T    +ASLL+ GF N  
Sbjct: 275 TLIAVVLQGTSGTT-ATEAASLLNYGFDNFN 304


>gi|228968521|ref|ZP_04129509.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228791227|gb|EEM38841.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 423

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           N+ G+                  +  +ARDM IL+  I T +P+ +   + +        
Sbjct: 163 NSTGLNNADLKGKHPEGTDPTGENSMSARDMGILAKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFSYDGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEHGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPVKKDTKVGSITLE 374


>gi|218900516|ref|YP_002448927.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           G9842]
 gi|218541526|gb|ACK93920.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           G9842]
          Length = 423

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           N+ G+                  +  +ARDM IL+  I T +P+ +   + +        
Sbjct: 163 NSTGLNNADLKGKHPEGTDPTGENSMSARDMGILAKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFSYDGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEHGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPVKKDTKVGSITLE 374


>gi|116493792|ref|YP_805526.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus casei ATCC 334]
 gi|227534583|ref|ZP_03964632.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239631047|ref|ZP_04674078.1| D-alanyl-D-alanine carboxypeptidase dacA [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301065368|ref|YP_003787391.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus casei str.
           Zhang]
 gi|116103942|gb|ABJ69084.1| D-Ala-D-Ala carboxypeptidase A, Serine peptidase, MEROPS family S11
           [Lactobacillus casei ATCC 334]
 gi|227187832|gb|EEI67899.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|239527330|gb|EEQ66331.1| D-alanyl-D-alanine carboxypeptidase dacA [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300437775|gb|ADK17541.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus casei str.
           Zhang]
          Length = 436

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 130/384 (33%), Gaps = 55/384 (14%)

Query: 1   MRQFL-----VIIAMAMLSNIFPFLSIAET-------NKLPYYTLLDTNTGHVIAENYPD 48
           M++ +      ++A+ M+    P +S++                 ++  TG ++      
Sbjct: 1   MKKLMRGLIAAVVAVLMIGGAAPAMSVSAAESSDTNLVDAKAAVAIEPTTGKILYAKNAS 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTP----ITISKNASEYPPSNSTFKKGSTMTL 104
                AS+TK+++  +V   +K  K            I + +     SN   ++  + ++
Sbjct: 61  SVLPIASMTKMLSIELVLDAIKSGKINWDDKVTLNNAIWELSQNRDLSNVPLRRDGSYSV 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
                  ++ SAN   + +AE +  +++KFV  M     + G++    +N  G+      
Sbjct: 121 RELYDASLIYSANAAMMLLAEKVAGSQEKFVSQMTAKLNSWGITDAKIVNVTGLNNSQLK 180

Query: 159 --------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW 205
                       +  +A+DMA ++  +  D P+ +    I     +          N NW
Sbjct: 181 DAKVPGTDDNAENEMSAKDMAQVAQHLLKDHPEVLKTTSIAKQTFRKGTSDAIDMENWNW 240

Query: 206 A------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSA 257
                      L  DG+KTG + A+G     +  +    +I VIL A    +  R   + 
Sbjct: 241 MLKGLVSYDKNLPVDGLKTGTSDAAGDCFTGTVEKNGMRIITVILHANGDAKTRRFDQTK 300

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSN------------EVPNISEEVCTTQKEIIN 305
            L++    N                 ++                  ++     + K+ + 
Sbjct: 301 KLMTNVLENWKTMTLAEAGQGIKGYDSVKVNRGQSRTTPIAPSTKAVAVVPSNSSKQSLQ 360

Query: 306 YNTQMKEAKDKESHFIDFEKITLL 329
           Y     +   K +     +K T +
Sbjct: 361 YTYTPAKGVKKNTVEAPVKKGTTI 384


>gi|296269600|ref|YP_003652232.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thermobispora
           bispora DSM 43833]
 gi|296092387|gb|ADG88339.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thermobispora
           bispora DSM 43833]
          Length = 307

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 9/247 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    LLD  TG  +           ASLTK+MTAY+V    K    ++  P  + 
Sbjct: 55  PEVYARAAYLLDAATGEELYGKAGTERMPVASLTKVMTAYLVLRQAKLTDTVVIDPADV- 113

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + A+    + +  + G  +T+++ L  L++ S  D A A+A       + F + MN+T++
Sbjct: 114 RYANAGGGTTAGLRAGDRLTVEDLLYALMLPSGADAAHALARVYGPGVEAFTKRMNDTAR 173

Query: 144 NLGLSATHFMNAHGVVQH--GHYTTARDMAILSWRIKTDFPQYMHYFQI-----KGLEIK 196
            LGL+ T ++NA G+      + +TARD A L+     D               +  +  
Sbjct: 174 ELGLTDTTYLNADGLPTPEGQNTSTARDQARLAEIALRDPRLKKITSTQVHTVARTADHA 233

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
              + NTN  +G   G  G+KTGFT A+GF +  +A +  + ++ VILG      R   +
Sbjct: 234 AYTWRNTNRLLGA-PGVIGVKTGFTLAAGFCLAFAAERDGRLVVGVILGETVSARRYTTA 292

Query: 257 ASLLSMG 263
            +LL   
Sbjct: 293 RALLDWA 299


>gi|206970485|ref|ZP_03231438.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           AH1134]
 gi|229072856|ref|ZP_04206055.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|229082601|ref|ZP_04215064.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|206735062|gb|EDZ52231.1| putative D-alanyl-D-alanine carboxypeptidase [Bacillus cereus
           AH1134]
 gi|228701033|gb|EEL53556.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228710347|gb|EEL62322.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
          Length = 423

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|220927973|ref|YP_002504882.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
 gi|219998301|gb|ACL74902.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulolyticum H10]
          Length = 406

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 138/349 (39%), Gaps = 23/349 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET--NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +  +V +A+ ++ N  P  +   T         L+DT  G ++ E       +P+ + KL
Sbjct: 4   KILIVFVALILIFNCLPVFAWTPTEGLTSSSVVLMDTVRGQILFEKNAYAHLSPSVMCKL 63

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA V           L   +TISKNA+ +   N           D    +++ +  +  
Sbjct: 64  MTALVTIEKTD-----LNAKVTISKNAASFKGLNLVVG-NQYTVEDLLYAVMLSQGNDAA 117

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
                       +KFV++MN  +K L L  T+F+N  G+ +   YT+A+D+A+L     +
Sbjct: 118 VALAEYVGDGDIQKFVRYMNTKAKELSLKDTYFVNPTGLYEKDQYTSAKDIAVLVKAAIS 177

Query: 180 DFPQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTG-FTCASGFNIVASAIQG 235
           +    + +       + G       N N    ++ G DG K G  T     + V +A   
Sbjct: 178 NNTFNLMFGARGFGWLNGNNSSILTNQNTLFWSYKGVDGGKIGTNTNPQSISAVTTATLN 237

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE- 294
           ++ LIAV+    + N     +A L   GF        +   I     +  + +V  +S+ 
Sbjct: 238 EKRLIAVVFNTNEENA-FSETAKLFDYGFSKFYTGVLVPKNIPQRSIEVDNVKVDLVSKI 296

Query: 295 EVCTTQKEIINY--------NTQMKEAKDKESHFIDFEKITLLKNKITK 335
           +V  T     ++        N ++K   + E+      K TL  N + +
Sbjct: 297 DVYYTYPVGDSFINNISFTPNEKLKLPLNTETI-AGVLKYTLNDNTVIE 344


>gi|313114789|ref|ZP_07800289.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622844|gb|EFQ06299.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 451

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/349 (18%), Positives = 120/349 (34%), Gaps = 24/349 (6%)

Query: 1   MRQFLVIIAMAML----SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++    + + +L           +         Y ++D +TG V+A+   +   +PAS+
Sbjct: 6   MKKLTAALCVVLLMICVFVPGAAAAGPALGATRAYCIIDADTGLVLAQQNMNEELHPASI 65

Query: 57  TKLMTAYVVFSFLK--EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           TK+MT  +     +       LT       + +    S+   ++G  + L +AL   ++ 
Sbjct: 66  TKVMTLGLACEKAQGNWDDIKLTVTHEDVYSLAGTDSSHIALREGEEVPLTDALYATMMA 125

Query: 115 SANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           SAND A  +AE + +      V  MN   + LGL+ THF N HG+    HYT+  DMA +
Sbjct: 126 SANDGANLLAEYVGEGTIADGVAKMNARVEELGLAHTHFANPHGISDEDHYTSCYDMAQI 185

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV------------GTFLGADGMKTGFT 221
                        + + +   ++                              G K G+T
Sbjct: 186 LRWALEQPGFEQVFTRNEMYTMQPTNIQPVTRYFSQQDKMRIGSSRYYISSILGSKLGYT 245

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT-----DRKKINYI 276
             + ++    A Q    LI V + +     +     +LL   F   T       + I   
Sbjct: 246 NTARYSYACLAEQNGVRLICVTMQSELSTDKYNDMRTLLDYAFSTFTGYTDLPAQGITAP 305

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           +           V      V       +  +      +  ES+ +  + 
Sbjct: 306 LSVVGGGGSLGTVTVSDPGVRLLLANGLTADDVEVTLELPESYVLGSDP 354


>gi|320101740|ref|YP_004177331.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Isosphaera
           pallida ATCC 43644]
 gi|319749022|gb|ADV60782.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Isosphaera
           pallida ATCC 43644]
          Length = 702

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 21/269 (7%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +         +  +D +TG V+    P+ P + AS TK+MTA++V   L      
Sbjct: 421 AANDPTAVPFVTARAWVAIDADTGRVLGGREPERPLDMASTTKIMTAHLVLKELAAHPEA 480

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK------ 129
               +T S  A+  P S+S  ++G  + +   L  L++ S ND AVA+AE   +      
Sbjct: 481 RDEVVTFSARAAATPGSSSEVREGERVRVGELLYGLMLPSGNDAAVALAEQFGQRLAARD 540

Query: 130 ------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
                   + FV  MN  ++ LGLSAT F+N HG+    H  +A D+A L+     +   
Sbjct: 541 GSDGLDPLEAFVAAMNREAQALGLSATRFVNPHGLTAPNHQASALDLARLTRVALENPEF 600

Query: 184 YMHYFQIKGL--------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                  +          + +   + NTN  +    G  G+KTG T ++G  +VA   QG
Sbjct: 601 AALVATRRRAARLIDGEGKGRTIVWSNTNELLKI-EGFAGVKTGTTSSAGACLVALGQQG 659

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGF 264
           ++ +I V+LG+    +R   + +L    F
Sbjct: 660 ERRVIVVVLGSAASASRYADARNLFRWAF 688


>gi|238925625|ref|YP_002939142.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
 gi|238877301|gb|ACR77008.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
          Length = 526

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 110/326 (33%), Gaps = 24/326 (7%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            +         P   +++ NTG V+ E        PAS+TK++T Y+     K  + +  
Sbjct: 85  TYWPEGPQINSPCAVVMEVNTGTVLYEKNSHEKHYPASITKILTTYLTILNCKMDEKVTF 144

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +   + +++           +  TM       +     + A   A    + L      F+
Sbjct: 145 SKEAVKESSDGSSSIKRDVGEEMTMEQTLYGVMLESANECAYAAAEHTGKKLGGDYSTFI 204

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--------------F 181
             MN  +K LG + THF NA+G+    H+T+A DM ++S     +               
Sbjct: 205 DLMNKEAKELGCTDTHFNNANGLPDENHWTSAYDMGLISCAAYRNDEFRKITGTKTYIIP 264

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           P   H             +P  +++        G KTG+T  +   +V  A +   +L  
Sbjct: 265 PTNKHTEDTPLYNHHAMLHPFKSYSQFVNHDCTGGKTGYTSVANSTLVTYAEKDGLTLCV 324

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKIN-------YIIKDFYQQNLSNEVPNISE 294
           VI+ A   +     + +LL+  F N                   D    N       +SE
Sbjct: 325 VIMNAQSPDQ-YADTNTLLNYYFSNFKALSIAENENSAAADNTPDLGVMNEHGMYAKVSE 383

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHF 320
                       + + + A  K  + 
Sbjct: 384 NYVVLPNNADFSSIKREAADMKSDNK 409


>gi|228918002|ref|ZP_04081534.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228841667|gb|EEM86779.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 423

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPKGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N +     +++     P     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVAQGKEDQVTVAPEKEITVIAKKGSKNPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|332359192|gb|EGJ37013.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK49]
          Length = 409

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 126/361 (34%), Gaps = 41/361 (11%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +            +D  +G ++ E   + P    S+T L+T Y+V+  +     
Sbjct: 2   TASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLLTVYLVYEAIDRGDL 61

Query: 75  MLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              T + IS  A      P  ++   +     + + +   ++ S+N   +A+AE L  +E
Sbjct: 62  TADTYVDISDYAYNLTANPNISNVPLEAKRYKVKDLIAASLMSSSNSATIALAEKLGGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV------------------------QHGHYTTA 167
           + FVQ M    K  G++    +N+ G+                            +  +A
Sbjct: 122 ENFVQMMKAKLKEWGITDATIVNSTGLNTLLLEYATEETEYSASASTTKKSKDTENKFSA 181

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCA 223
            D+A++S  +  DFPQ          +I G    N N+          G DG+K G +  
Sbjct: 182 YDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNFRSGVDGLKAGSSDK 241

Query: 224 SGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI------ 273
            G + VA+  +    +I V+L       D   R   +ASL++    N T    +      
Sbjct: 242 GGSSFVATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQNFTQTTIVAEGEAY 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           N                  S++    ++       +++ + +++      +K T L    
Sbjct: 302 NKSKSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGFQAPLKKNTELGTLT 361

Query: 334 T 334
            
Sbjct: 362 Y 362


>gi|228936676|ref|ZP_04099469.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823015|gb|EEM68854.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 423

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSITLAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N +     +++     P     V   +     Y
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVAQGKEDQVTVAPEKEITVIAKKGSKNPY 342

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 343 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|229156148|ref|ZP_04284246.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228627331|gb|EEK84060.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
          Length = 338

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ ++G V+ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINAHSGEVVYKKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E    L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYITLEQLNEGTIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHTLLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++A 
Sbjct: 124 NRSALALAEHIAGNEDNFTQLMNEKAKQLKLSQPSPFLNATGMNNDTNKLSTTTAIEVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++       K  K  NTN  +          G DG++T F+   
Sbjct: 184 LATQLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAKRGDTRLISVILDAENENSTFIETKKLLQYGFD 284


>gi|326205032|ref|ZP_08194882.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           papyrosolvens DSM 2782]
 gi|325984837|gb|EGD45683.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           papyrosolvens DSM 2782]
          Length = 405

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 77/338 (22%), Positives = 133/338 (39%), Gaps = 15/338 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLS--IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +   VI+ M ++ N FP  +   AE+       L+DT  G V+         +P+ + KL
Sbjct: 4   KIISVIVTMILVLNSFPVFAWTPAESLTSSSVVLMDTVRGQVLFGKNAYKHLSPSVMCKL 63

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA V           L   +TISKNA+ +   N           D    +++ +  +  
Sbjct: 64  MTALVTIEKTD-----LNAKVTISKNAASFNGLNLVVG-NQYTVEDLLYAVMLSQGNDAA 117

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
                       +KFV++MN  +K L L  T+F+N  G+ +   YT+A D+A+L     +
Sbjct: 118 VALAEYVGDGDIQKFVRYMNTKAKELSLKDTYFVNPTGLYEKSQYTSANDIALLIKAAIS 177

Query: 180 DFPQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTG-FTCASGFNIVASAIQG 235
           +    + +       + G       N N    ++ G DG K G  T    F+ V +A Q 
Sbjct: 178 NNTFNVIFGARGFGWLNGNDSSILTNQNTLFWSYKGVDGGKLGANTNPQSFSAVTTAFQN 237

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE- 294
           D+ LIAV+     +      +A L   GF        +   I     +  + +V  +S+ 
Sbjct: 238 DKRLIAVVFN-NSKENAFSETAKLFDYGFSKFYTGVLVPKNIPQRSIEVDNVKVDLVSKI 296

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +V  T     ++   +   K+ E   +     T+    
Sbjct: 297 DVYYTYPVGDSFIKNISFLKN-EKLKLPVNTETIAGVL 333


>gi|315226481|ref|ZP_07868269.1| serine-type D-Ala-D-Ala carboxypeptidase [Parascardovia denticolens
           DSM 10105]
 gi|315120613|gb|EFT83745.1| serine-type D-Ala-D-Ala carboxypeptidase [Parascardovia denticolens
           DSM 10105]
          Length = 483

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 65/323 (20%), Positives = 123/323 (38%), Gaps = 28/323 (8%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A +      P  S        +   ++  TG V+ +   D P   AS+TKL+T Y+ + 
Sbjct: 39  LAASAAETSSPSTSHMPHVAAAHAYAIEYQTGRVLLDQDGDEPAGIASMTKLITLYLTYK 98

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA---LKLLIVKSANDIAVAIA 124
            + + K   +T + +S  + +   +  T     +         +   ++ SAN  A+++A
Sbjct: 99  AVAQGKLTWSTKVHVSDYSYQVATNPLTTSADMSRREFTVSDLVNAAMLPSANSAAISLA 158

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------GHYTTARDM 170
           E +  +E KFV  M    +  G++     NA G+                  +  +A+DM
Sbjct: 159 ERIGGSEPKFVDLMRAQVRAWGITDARIYNASGLNNSFLGSNIYPGSSSKAENALSAKDM 218

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGF 226
           AI++W +  D+P  +   +       GK    TN         + G DG+KTG T  +G 
Sbjct: 219 AIVAWHLIHDYPSILTISKKTQASFGGKTISTTNHMLPGEEAAYPGVDGLKTGTTDEAGA 278

Query: 227 NIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
              A+A+     +IAV+  A   +     R K   +L    +        ++   +    
Sbjct: 279 CFTATALVKGMRVIAVVQKADKADADPLARFKAMKTLFDYCYQAYRMVIVVSQGKQ---Y 335

Query: 283 QNLSNEVPNISEEVCTTQKEIIN 305
           +  +  V +  E       +   
Sbjct: 336 KGSTVAVQDGQERSVIAVADRDW 358


>gi|227876929|ref|ZP_03995025.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus crispatus
           JV-V01]
 gi|256850179|ref|ZP_05555609.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus
           MV-1A-US]
 gi|227863486|gb|EEJ70909.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus crispatus
           JV-V01]
 gi|256713151|gb|EEU28142.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus
           MV-1A-US]
          Length = 433

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 66/353 (18%), Positives = 129/353 (36%), Gaps = 37/353 (10%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+++G ++           AS+TKL+T Y+    +K  K 
Sbjct: 36  TTSSYQADQVKLNVKSAIAIDSDSGQILYAKNATKTLPIASMTKLVTVYLTLQAIKNHKL 95

Query: 75  MLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 96  SWDQKVKPTAPIVKVANNAEYSNVPLKLGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 155

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +K FV  M    K  G+  T    A G+                  +  +A+DMAI+   
Sbjct: 156 QKAFVDQMRAQVKKWGIEDTKIYTACGLPNGNVGKDAYPGVNKNAENSMSAKDMAIVGQN 215

Query: 177 IKTDFPQYMHYFQIKGLEI----KGKKYPNTNWA-------VGTFLGADGMKTGFTCASG 225
           +  DFP+ +   ++  L+        K  N NW           +   DG+KTG T A+G
Sbjct: 216 LIKDFPEVLDTTKLAHLDFKDAGHATKMANFNWMLKGLSQYDPAYP-VDGLKTGTTDAAG 274

Query: 226 FNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
              + +       LI V++GA         R   +  L++  F              +  
Sbjct: 275 ACFIGTVQHNGARLITVVMGARHRDGTDPARFMQTKKLMNFIFTKYRPVTMTAGSQMNGA 334

Query: 282 QQNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLLKN 331
           +     +  N +  +    K  I        +  + +K++     +K   + +
Sbjct: 335 KTIKVTDGDNATTNLGLKNKTTIWDPADGKTLVASLNKKTVEAPIKKDQTIGD 387


>gi|229181636|ref|ZP_04308961.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
 gi|228601832|gb|EEK59328.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
          Length = 423

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPIKKDAKVGSITLE 374


>gi|258645732|ref|ZP_05733201.1| methylenetetrahydrofolate reductase [Dialister invisus DSM 15470]
 gi|260403101|gb|EEW96648.1| methylenetetrahydrofolate reductase [Dialister invisus DSM 15470]
          Length = 330

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 29/305 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIAEN 45
           ++ FL II+  ++     F ++A                        L+D NTG +IA+ 
Sbjct: 12  LKYFLTIISCIVIFTGIGFGTLAYMTPPPPKPPVFPPLPPVGAVSAVLMDGNTGDIIAQK 71

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             +    PAS TK++T  +        +  L     I+  A     +N   +    ++L 
Sbjct: 72  EGELKIYPASTTKILTCIIALEE---GREKLEADAVITPLAIGQDGTNIGLRSDMPISLH 128

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             L  +++ S ND AV++AE++  +   F+Q MN  + ++G + +HF N +G+    HYT
Sbjct: 129 ELLYGMMLVSGNDAAVSVAETVGGSYGGFIQMMNEKAVSIGATRSHFANPNGLTDKNHYT 188

Query: 166 TARDMAILSWRIKTDFP----QYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGF 220
           TA DMA +S     +           + ++      +   N N +    + GA+G+KTG 
Sbjct: 189 TAIDMAKISRYAMGNPEFRKIVREKVYPMRYRSGVYRNVENRNEFLSNGYRGANGIKTGM 248

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF---YNKTDRKKINYII 277
           T A+G  +VASA +  Q LIA +    D   R K   +    GF         ++     
Sbjct: 249 TMAAGECLVASAERDGQLLIAAV---YDDENRWKDVEAWFDYGFACIRAWEKYEQEMAGE 305

Query: 278 KDFYQ 282
              Y+
Sbjct: 306 PAVYK 310


>gi|94264946|ref|ZP_01288718.1| Serine-type D-Ala-D-Ala carboxypeptidase [delta proteobacterium
           MLMS-1]
 gi|94267812|ref|ZP_01290999.1| Serine-type D-Ala-D-Ala carboxypeptidase [delta proteobacterium
           MLMS-1]
 gi|93451851|gb|EAT02592.1| Serine-type D-Ala-D-Ala carboxypeptidase [delta proteobacterium
           MLMS-1]
 gi|93454602|gb|EAT04877.1| Serine-type D-Ala-D-Ala carboxypeptidase [delta proteobacterium
           MLMS-1]
          Length = 359

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 68/291 (23%), Positives = 124/291 (42%), Gaps = 9/291 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+      S+          ++D  +G +I    PD P  PAS  K++TA +    L+E 
Sbjct: 76  LTGGAVAASLERQITARTAVVIDAASGRLIYSLNPDTPRQPASTIKVITALIALDSLREH 135

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             + T     S+ A++ P S    ++G +    + +  ++++SAND AVA+AE +   E+
Sbjct: 136 AMVPT-----SRRAAQMPRSKVYLQQGRSYRAGDLVDAILMRSANDAAVALAEKIAGNER 190

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F + M +  + +G + T   NA+G+   G  +TARD+A++      + P+         
Sbjct: 191 AFARLMTSKVRAMGANNTTLRNANGLTAQGQQSTARDLALILH-RAMEHPELAQRLGTVS 249

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G+    +N A+    G+ G KTGFT A+    V    +G+  LI  ++G+      
Sbjct: 250 TNGLGQTMRTSNRALWQINGSQGGKTGFTRAAQQTYVGKFQRGNHELIVALMGSTT---M 306

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                 L++ GF    ++  +     D             S  V +   + 
Sbjct: 307 WDDVRQLVNYGFQQIGNQALMAAAPVDPAFTRQPTATAASSLTVLSDAAKS 357


>gi|146305107|ref|YP_001185572.1| D-alanyl-D-alanine endopeptidase [Pseudomonas mendocina ymp]
 gi|145573308|gb|ABP82840.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Pseudomonas mendocina ymp]
          Length = 300

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 107/265 (40%), Gaps = 11/265 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           L++ A  ++SN+    +  +         L+D  TG  +  + PD     AS+TKLMTA 
Sbjct: 10  LLLSAGLVVSNLQAAPAQPQQELAAGSALLIDLKTGKELYSSNPDLRLPVASVTKLMTAM 69

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV       K  L   + I+ ++  E     S  + GS ++  + L L ++ S N  A +
Sbjct: 70  VVLDA----KLPLDEVLPITIRDTKEMQGVYSRVRIGSEISRRDMLHLALMSSENRAAAS 125

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A         FV  MN  +K LG+  +HF+   G+ +    T      ++    +    
Sbjct: 126 LAHHYPGGHVAFVAAMNAKAKALGMHNSHFVEPTGMSERNVATARDLALMIKATQQYPLI 185

Query: 183 QYMHYFQIKGLEIKGKKY----PNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQ 237
                     +  +   Y     NTN  V       GM KTGFT A+G  +V       +
Sbjct: 186 GQFSTDSEATVTFRKPTYTLGFRNTNALVRKPDWDIGMSKTGFTNAAGRCLVMLTSMNQR 245

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
           S+  V+LGA  + T    +  L   
Sbjct: 246 SVAFVVLGAFGKYTHMADANRLKRW 270


>gi|326407895|gb|ADZ64966.1| D-alanyl-D-alanine carboxypeptidase [Lactococcus lactis subsp.
           lactis CV56]
          Length = 435

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 76/391 (19%), Positives = 141/391 (36%), Gaps = 58/391 (14%)

Query: 1   MRQFLVIIAMAMLS----------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DH 49
           M++  +I    ++S                +   T        +D ++G ++      D 
Sbjct: 1   MKKIAIIFCSFLISLSVLSGFSVSAATTPTTNDFTVAAKSAIAIDASSGKILYAQNADDA 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS+TKL+TAY+V+  + E K    T + IS  A E   +++             +K
Sbjct: 61  STRIASITKLLTAYLVYKNVAENKLTWNTKVPISDYAYELTQNSNASNIPLVQNGQYTVK 120

Query: 110 LLIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--- 162
            L+      SAN  AVA+AE +  +E KFV  M    K+ G++ +H +NA G+       
Sbjct: 121 DLLNALLLPSANSAAVALAEKIAGSEPKFVDMMTKQMKDWGITDSHLVNASGLPNDDLNG 180

Query: 163 -----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA 206
                      +  +A+ +A LS+ +  DFP+ +   +   +             NTN  
Sbjct: 181 HIYPGSGASATNTMSAKAVATLSYHLIQDFPEILQITKKTEIPFDTGNEAKMTLTNTNQM 240

Query: 207 VGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSAS 258
           +  F     G DG+KTG T         +  Q    +I V+L A D     +T   ++  
Sbjct: 241 LSGFSTSRTGVDGLKTGSTSFQIDCFAGTTNQNGFRIITVVLEATDPAADNSTPFTLTNQ 300

Query: 259 LLSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQ----------KE 302
           L++  + +      +          +          V  ++ +  T             +
Sbjct: 301 LMNYVYGHWRTTSLVQKNKSLDDFKEIAVTDGKEKSVQLVAPQNITPVVPYATDGSADTK 360

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            +      K+    E+     +K+  L   +
Sbjct: 361 SLTVKFSKKKTASVEATVTKNQKLVTLSTTV 391


>gi|281492939|ref|YP_003354919.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281376591|gb|ADA66077.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactococcus lactis
           subsp. lactis KF147]
          Length = 435

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 77/391 (19%), Positives = 143/391 (36%), Gaps = 58/391 (14%)

Query: 1   MRQFLVIIAMAMLS----------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DH 49
           M++  +I    ++S                +   T        +D ++G ++      D 
Sbjct: 1   MKKIAIIFCSFLISLSVLSGFSVSAATTPTTNDFTVAAKSAIAIDASSGKILYAQNADDA 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLD 105
               AS+TKL+TAY+V+  + E K    T + IS  A         SN    +    T+ 
Sbjct: 61  STRIASITKLLTAYLVYKNVAENKLTWNTKVPISDYAYELTQNSNASNIPLAQNGQYTVK 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--- 162
           + L  L++ SAN  AVA+AE +  +E KFV  M    K+ G++ +H +NA G+       
Sbjct: 121 DLLNALLLPSANSAAVALAEKIAGSEPKFVDMMTKQMKDWGITDSHLVNASGLPNDDLNG 180

Query: 163 -----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA 206
                      +  +A+ +A LS+ +  DFP+ +   +   +             NTN  
Sbjct: 181 HIYPGSGASATNIMSAKAVATLSYHLIQDFPEILQITKKTEIPFDTGNEAKMTLTNTNQM 240

Query: 207 VGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSAS 258
           +  F     G DG+KTG T         +  Q    +I V+L A D     +T   ++  
Sbjct: 241 LSGFSTSRTGVDGLKTGSTSFQIDCFAGTTNQNGFRIITVVLEATDPAADNSTPFTLTNQ 300

Query: 259 LLSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQ----------KE 302
           L++  + +      +          +          V  ++ +  T             +
Sbjct: 301 LMNYVYGHWRTTSLVQKNQSLDDFKEITVTDGKEKSVQLVAPQNITPVVPYATDGSADTK 360

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            +      ++    E+     +K+  L   +
Sbjct: 361 SLTVKFSKEKTASVEATVTKNQKLVTLSTTV 391


>gi|94993641|ref|YP_601739.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10750]
 gi|94547149|gb|ABF37195.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS10750]
          Length = 410

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 141/364 (38%), Gaps = 29/364 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +   +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVALESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ--MKEAKDKESHFIDFEKITLLKN 331
           N  +K     + S +   +  +      + I+  T+  +   K   +      K  +L  
Sbjct: 302 NKPVKTLSVLDSSEKTVKLVAQNSLFFIKPIHTKTKNTVHITKKSSTMIAPLSKGQVLGR 361

Query: 332 KITK 335
              +
Sbjct: 362 ATLQ 365


>gi|295116026|emb|CBL36873.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SM4/1]
          Length = 528

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 125/338 (36%), Gaps = 30/338 (8%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +   P              ++D ++G V+      +   PAS+ KL+TA VV        
Sbjct: 27  ALAAPEWPSDTGIMADIGIVIDADSGAVLFGQGIHNQSPPASIAKLLTALVVVENS---- 82

Query: 74  AMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             L   +T S +A         +    ++G  +++ + L LL+++S+N  A A+AE +  
Sbjct: 83  -SLDDMVTFSHDAVYNVESGSGNKKNIEEGDVLSVRDCLYLLLLQSSNQAANALAEHVAG 141

Query: 130 TEKKFVQHMNNTSKNLGL-SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
           +   FV+ MN     LG    THF N  G+     + +A DMA+++     D  Q     
Sbjct: 142 SRDAFVEMMNEKVSELGCVDDTHFANPSGLNDDTQHVSAYDMALIAK-AAFDNQQVYEIA 200

Query: 189 QIKGLE-------IKGKKYPNTNW--------AVGTFLGADGMKTGFTCASGFNIVASAI 233
             K  +         G    N +         +   +  A   KTG+T  +G  +V  A 
Sbjct: 201 STKSYKLPATINNPNGVTCTNEHRLIITEDETSELYYPAAKAGKTGYTSLAGNTLVTCAE 260

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +  + LI+VIL             +LL  GF    +         +  +     E   ++
Sbjct: 261 EDGRCLISVILKGQPSPNYFLDGKNLLQFGFERFQNLSV----PDNETRYVTGEEFVAVN 316

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
               +     I   T +   KD        E +T+L +
Sbjct: 317 GTEYSPSDLEIEAGTVITIPKDASFQDAALELVTVLPD 354


>gi|229118879|ref|ZP_04248226.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228664535|gb|EEL20030.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
          Length = 423

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 128/332 (38%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N+ +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANDHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  I T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNGENSMSARDMGILSKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G+DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGSDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S +L+  GF +   +K            +           +E+    K+      
Sbjct: 283 ERFTESRALIEYGFNSFKKQKLKIDKNNTISVVKGKADQVTVAPEKEITVIAKKGDKSPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + + + +
Sbjct: 343 KISTEADKSLAEDGHLIAPIKKDTKVGSIVLE 374


>gi|118477954|ref|YP_895105.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118417179|gb|ABK85598.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
          Length = 338

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 118/274 (43%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   +     A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEETSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N   +A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ R+ T
Sbjct: 131 AEHIAGNEDNFTQLMNEKAKQLKLSQPFPFLNATGMNNGTNKLSTTTAIEVGKLATRLVT 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++   +   K     N     +         G DG++T F+  S ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNSNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKRGDTRLISVILDADNENSTFIETKKLLQYGFD 284


>gi|297569645|ref|YP_003690989.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfurivibrio alkaliphilus AHT2]
 gi|296925560|gb|ADH86370.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfurivibrio alkaliphilus AHT2]
          Length = 365

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 8/241 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  TG ++    PD P  PAS  K++TA +    L++        ++ S  
Sbjct: 93  ITARSAVVVDPTTGRLLFALNPDQPRQPASTIKIVTALIAMQSLRD-----QELVSTSAR 147

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+  P S    + G +    + +   ++ SAND +VA+AE +  +E  F + M + ++ +
Sbjct: 148 AARMPRSKIYLQAGRSYRAGDLINATLLSSANDASVALAERIAGSEAAFARLMTSKARAM 207

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G + T   N++G+   G  +TARD+AI+  R   +                G+     N 
Sbjct: 208 GATNTVIHNSNGLTARGQQSTARDLAIILHRSMQNPEFARRLGTTSASTNFGQTLRTNNR 267

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A+    GA+G KTGFT A+    V    +G+Q LI  ++G+       +    L+  GF 
Sbjct: 268 ALWQINGAEGGKTGFTRAARQTYVGKFKRGNQELIVALMGSDT---MWEDVGQLVEYGFR 324

Query: 266 N 266
            
Sbjct: 325 Q 325


>gi|293379842|ref|ZP_06625964.1| beta-lactamase [Lactobacillus crispatus 214-1]
 gi|290923614|gb|EFE00495.1| beta-lactamase [Lactobacillus crispatus 214-1]
          Length = 433

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 130/352 (36%), Gaps = 35/352 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+++G ++           AS+TKL+T Y+    +K  K 
Sbjct: 36  TTSSYQADQVKLNVKSAIAIDSDSGQILYAKNATKTLPIASMTKLVTVYLTLQAIKNHKL 95

Query: 75  MLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 96  SWDQKVKPTAPIVKVANNAEYSNVPLKLGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 155

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +K F+  M    K  G+       A G+                  +  +A+DMAI+  +
Sbjct: 156 QKAFIDQMRAQVKKWGIEDAKIYTACGLPNGNLGKDAYPGVNKNAENTMSAKDMAIVGQK 215

Query: 177 IKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVG---TFLG---ADGMKTGFTCASGF 226
           + + FP+ +   ++  L         K  N NW +     +      DG+KTG T A+G 
Sbjct: 216 LISAFPEVLETTRLAHLNFKDAGHVTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGA 275

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             + +       LI V++GA         R   +  L++  F              +  +
Sbjct: 276 CFIGTVQHNGARLITVVMGARHRDGTDPARFMQTKKLMNFIFTKYRPVTMTAGSQMNGAK 335

Query: 283 QNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLLKN 331
                +  N +  +   QK  I        +  + +K+S     +K   + +
Sbjct: 336 TIKVVDGDNATTNLGLKQKTTIWDPADGKTLVASLNKKSVEAPIKKDQTVGD 387


>gi|153938979|ref|YP_001390767.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum F str. Langeland]
 gi|152934875|gb|ABS40373.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum F str. Langeland]
 gi|295318839|gb|ADF99216.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum F str. 230613]
          Length = 424

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 15/339 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I  + + SN+F      + + T        +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFILTLTSNVFAAGNSNTESPTIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND+A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPQYSLNINLHPIDIGETIKAENVMDGLLLFSGNDVAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   MN   + L L  THF+  +G+    HYTTA D++++S     + 
Sbjct: 131 MIGDALAGNNKNFENMMNKKIQELNLKNTHFVTPNGLHNPNHYTTAYDLSVISRAALKNP 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       N+N  +G   G    KTG+T A+G  +V    +  +
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMTIENSNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDGR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ V++G+      +   +    ++   +  K     +K  +   +      L    P+
Sbjct: 250 KILGVVMGSVYDAKDSFVFQDMKKIIDWSYNVKPSTLYKKDSSLKTETVTYNPLKIIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFEKITLL 329
           ++ +V    KE +  Y  ++ + +  ++  ID      L
Sbjct: 310 VTIDVPIILKEDVTYYKNEVNDKEANKTINIDNTSYAAL 348


>gi|118480420|ref|YP_897571.1| D-alanyl-D-alanine carboxypeptidase A [Bacillus thuringiensis str.
           Al Hakam]
 gi|118419645|gb|ABK88064.1| D-Ala-D-Ala carboxypeptidase A, Serine peptidase, MEROPS family S11
           [Bacillus thuringiensis str. Al Hakam]
          Length = 441

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 61  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 121 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 180

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 181 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 240

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 241 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 300

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 301 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKDPY 360

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 361 KIGTEVDKSLAEDGHLVAPIKKNVKVGSITLE 392


>gi|225026550|ref|ZP_03715742.1| hypothetical protein EUBHAL_00799 [Eubacterium hallii DSM 3353]
 gi|224956099|gb|EEG37308.1| hypothetical protein EUBHAL_00799 [Eubacterium hallii DSM 3353]
          Length = 491

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 73/326 (22%), Positives = 125/326 (38%), Gaps = 13/326 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              LS A         ++D NTG ++     D    PAS+TK+MTA +     K    + 
Sbjct: 69  ISNLSGAPDIVAESAVVMDANTGTILYGKEADTKRYPASITKVMTALLAVENCKMSDVI- 127

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T    + N  E   S +    G+ +T++++L  L++ SAN+ A AIAE +  +  +F +
Sbjct: 128 -TYSNAAVNGIEAGSSTAGINVGAKLTVEDSLYALMLVSANEAAAAIAEHISGSTTEFAK 186

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY----MHYFQIKG 192
            M   +K LG + T F N HG+    HYTTA DM ++                  + +K 
Sbjct: 187 LMTKRAKELGCTNTQFKNPHGLPNEEHYTTAHDMGLILKEAMKHEEFRKISGTISYTLKK 246

Query: 193 LEIKGKKYPNTNW-------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            +         N        +   +  A+G KTGFT  +   +V  A + +  LI VIL 
Sbjct: 247 SDTLKDTLELWNHAKILRENSDYYYKYAEGAKTGFTQVALNTLVTYAKKDNVELICVILK 306

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
               +     +A+L    F        +            ++   +  +++         
Sbjct: 307 DYGADKSYTDTANLFKWAFNQVKSVTPLTDFSLKTAMTANTSIDSSKLDQIQLLNSVYDK 366

Query: 306 YNTQMKEAKDKESHFIDFEKITLLKN 331
             + + +    ES      K+   K 
Sbjct: 367 NFSVLVKKDFNESDLKTAFKLDEDKK 392


>gi|308270080|emb|CBX26692.1| hypothetical protein N47_A07210 [uncultured Desulfobacterium sp.]
          Length = 370

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 84/351 (23%), Positives = 138/351 (39%), Gaps = 35/351 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAENYPDH 49
           F+++I+    S +   L      +                    +D  TG ++    PD 
Sbjct: 24  FVIVISFCFHSGLIFALDNNPKLQNKTNYKNKSNIATYTRAAVAMDVTTGKILYAKNPDL 83

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS TKLMTA V           L   +T+SK AS   P  + FK G  +T++  L 
Sbjct: 84  KCFPASTTKLMTAIVSIENAD-----LNNLVTVSKTASNVSPHKAGFKAGDKVTVEKLLY 138

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA-- 167
             +V SAND AVA+AE +  +   FV+ MN  +  +G S T F+N +G+   G Y TA  
Sbjct: 139 AALVGSANDAAVALAEGVSGSVDGFVELMNKKAVAIGASNTRFINPNGLPGPGQYITASD 198

Query: 168 --RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
             + +       K        + +I  L+       NTN  + +     G KTG+T  +G
Sbjct: 199 LSKILQYALRYPKLREIIGTRFAEITTLDGMPIHLKNTNKLLWSDEEVIGGKTGYTRRAG 258

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT-----------DRKKIN 274
              V +A + +  +I  +LG+  R    K S +L++ GF  K             +  + 
Sbjct: 259 HCFVGAAERENDKIIIALLGSPSRKDLWKQSETLIAKGFEIKENSEEPLVYCTQTKPLLA 318

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD-KESHFIDFE 324
                      + ++   S +    +K   +   +M    + K     D +
Sbjct: 319 KTSYKNRTTIRNKKIKKHSGKRSILRKSKKHKRDRMIAKNNYKYKDIADNK 369


>gi|168180431|ref|ZP_02615095.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum NCTC
           2916]
 gi|182668648|gb|EDT80626.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum NCTC
           2916]
          Length = 378

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 128/317 (40%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANEIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  +TL   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKITLRELLYGLMLRSGNDAAIAIAEGIAGSIEGFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+   D  +I V+L       R 
Sbjct: 207 NF-TRDYQNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINDNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTRGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|153933846|ref|YP_001384111.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934860|ref|YP_001387651.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum A str.
           Hall]
 gi|152929890|gb|ABS35390.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930774|gb|ABS36273.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum A str. Hall]
          Length = 378

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 14/317 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +            +D +TG V+ E   +     AS TK+MT  V   +       L 
Sbjct: 32  SQKNKPPYINARCAIAIDKDTGIVLFEKSANGIVPIASTTKIMTTLVALKY-----GDLD 86

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             I IS+NA +   S   ++KG  + L   L  L+++S ND A+AIAE +  + + F + 
Sbjct: 87  RKIEISENADKIRGSVVGYRKGEKIALRELLYGLMLRSGNDAAIAIAEGIAGSVEGFSKL 146

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQYMHYFQIKGL 193
           MN  +  +GL  +HF+  HG+ +  HY+TA D     A        +        + +  
Sbjct: 147 MNEYASEIGLLNSHFITPHGLDKDEHYSTAYDLALATATAKKYELFNKIVSSKDVKKEEY 206

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               + Y N N  +     ADG+KTG+T  +G  +V S+      +I V+L       R 
Sbjct: 207 NF-TRDYHNINKILWKIPEADGVKTGYTGKAGKCLVTSSKINGNDIIIVVLNCT---PRW 262

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE-EVCTTQKEIINYNTQMKE 312
             +  + +    N   +K                 V  I++ ++    K   +Y+ ++ +
Sbjct: 263 NETTKIHNYVKNNYDFKKICTRGDILDQAVFEEGSVNIIADKDIIIPFKNGADYSIKINK 322

Query: 313 AKDKESHFIDFEKITLL 329
            K+        E    L
Sbjct: 323 PKELNWKVKKGEDFGSL 339


>gi|324989891|gb|EGC21833.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK353]
          Length = 409

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 125/361 (34%), Gaps = 41/361 (11%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +            +D  +G ++ E   + P    S+T L+T Y+V+  +     
Sbjct: 2   TASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLLTIYLVYEAIDRGDL 61

Query: 75  MLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              T + IS  A      P  ++   +     + + +   ++ S+N   +A+AE +  +E
Sbjct: 62  TADTYVDISDYAYNLTSNPNISNVPLEAKRYKVKDLIAASLMSSSNSATIALAEKVGGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV------------------------QHGHYTTA 167
           + FVQ M    K  G+     +N+ G+                            +  +A
Sbjct: 122 ENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASASTAKKSKDTENKFSA 181

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCA 223
            D+A++S  +  DFPQ          +I G    N N+          G DG+K G +  
Sbjct: 182 YDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNFRSGVDGLKAGSSDK 241

Query: 224 SGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI------ 273
            G + VA+  +    +I V+L       D   R   +ASL++    N T    +      
Sbjct: 242 GGSSFVATTTENGIRMITVVLDVDQTDGDPYARFVATASLMNYVSQNFTQTTIVAEGEAY 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           N                  S++    ++       +++ + +++      +K T L    
Sbjct: 302 NKSRSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGFKAPLKKNTELGTLT 361

Query: 334 T 334
            
Sbjct: 362 Y 362


>gi|325571073|ref|ZP_08146645.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus
           casseliflavus ATCC 12755]
 gi|325156158|gb|EGC68344.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus
           casseliflavus ATCC 12755]
          Length = 411

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/319 (18%), Positives = 120/319 (37%), Gaps = 34/319 (10%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           + +        +        +D +TG V+ +   +     AS+TK+++ Y+V   +++  
Sbjct: 63  TAMSAEEIQDFSVDAKAAYSIDFDTGKVLYDQDGETAMGIASITKIISLYLVAEQVEQGT 122

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK---- 129
                P+ IS  A+    S +         +   +K L   S    A A   +L +    
Sbjct: 123 IAWDDPVPISDYAANLSVSPNLSNVPLHQDVTYTVKDLYDASYIQSANAAIVALAELIAG 182

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYTTARDMAILSW 175
           +E  FV  M    ++ G++    +NA G+                  +  +A+D+A+++ 
Sbjct: 183 SESAFVDQMQEKVQSWGITDAKIVNASGLNNTYLGDNIYPGSTSTDENELSAKDVALIAR 242

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTF----LGADGMKTGFTCASGF 226
            +  DFP  +    +   +     Y      N NW +  F     G DG+KTG T  +G 
Sbjct: 243 HLLQDFPDVLEVTSLSTKQFGEGSYSPVEMVNWNWMLPGFTNTKDGVDGLKTGTTDMAGA 302

Query: 227 NIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             V +A++  Q +I V+L     A + + R   +  L+   F      + +    ++   
Sbjct: 303 CFVGTAVKDGQRIITVVLNVNGHAENPSVRFIETGRLMDYSFDAWEQVEIL---PENAQL 359

Query: 283 QNLSNEVPNISEEVCTTQK 301
           ++         +E+     
Sbjct: 360 EDTQTVAVKDGKELSVPVA 378


>gi|229094501|ref|ZP_04225570.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|229124894|ref|ZP_04254070.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|228658524|gb|EEL14188.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|228688885|gb|EEL42715.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
          Length = 441

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 61  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 121 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 180

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 181 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 240

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 241 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 300

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 301 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKNPY 360

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 361 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 392


>gi|49477760|ref|YP_036665.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329316|gb|AAT59962.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 338

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   +     A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEETSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N   +A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ R+ T
Sbjct: 131 AEHIAGNEDNFTQLMNEKAKQLKLSQPSPFLNATGMNNGTNKLSTTTAIEVGKLATRLVT 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++   +   K     N     +         G DG++T F+  S ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNSNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +G+  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKRGNTRLISVILDADNENSTFIETKKLLQYGFD 284


>gi|170755178|ref|YP_001781058.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120390|gb|ACA44226.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 424

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 137/339 (40%), Gaps = 15/339 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I  + + SN+F      + + T        +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFILTLTSNVFAAGNSNTESPTIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND+A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPQYSLNINLHPIDIGETIKAENVMDGLLLFSGNDVAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   MN   + L L  THF+  +G+    HYTTA D++++S     + 
Sbjct: 131 MIGDALAGNNKNFENMMNKKIQELNLKNTHFVTPNGLHNPNHYTTAYDLSVISRAALKNT 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       N+N  +G   G    KTG+T A+G  +V    +  +
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMTIENSNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDGR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ V++G+      +   +    ++   +  K     +K  +   +      L    P+
Sbjct: 250 KILGVVMGSVYDAKDSFVFQDMKKIIDWSYNVKPSTLYKKDSSLKTETVTYNPLKIIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFEKITLL 329
           ++ +V    KE I  Y  ++ + +  ++  ID      L
Sbjct: 310 VTIDVPIILKEDITYYKNEVNDKEANKTINIDNTSYAAL 348


>gi|327488930|gb|EGF20727.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1058]
          Length = 409

 Score =  135 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 64/361 (17%), Positives = 126/361 (34%), Gaps = 41/361 (11%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +            +D  +G ++ E   + P    S+T L+T Y+V+  +     
Sbjct: 2   TANKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLLTVYLVYEAIDRGDL 61

Query: 75  MLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              T + IS  A      P  ++   +  +  + + +   ++ S+N   +A+AE +  +E
Sbjct: 62  TADTYVDISDYAYSLTSNPNISNVPLEAKSYKVKDLIAASLMSSSNSATIALAEKVGGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV------------------------QHGHYTTA 167
           + FVQ M    K  G+     +N+ G+                            +  +A
Sbjct: 122 ENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSASASTFKKSKDTENKFSA 181

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCA 223
            D+A++S  +  DFPQ          +I G    N N+          G DG+K G +  
Sbjct: 182 YDLAVISRHLIMDFPQVTEITSKSTAKIAGTSLENYNFMLENQSNFRSGVDGLKAGSSDK 241

Query: 224 SGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI------ 273
            G + VA+  +    +I V+L       D   R   +ASL++    N T    +      
Sbjct: 242 GGSSFVATTTENGIRMITVVLDVDQTDGDPYARFVATASLMNYVSQNFTQTTIVAEGEAY 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           N                  S++    ++       +++ + +++      +K T L    
Sbjct: 302 NKSKSTVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGFQAPLKKNTELGTLT 361

Query: 334 T 334
            
Sbjct: 362 Y 362


>gi|65317369|ref|ZP_00390328.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
          Length = 441

 Score =  135 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 76/332 (22%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 61  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 121 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 180

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 181 NATGLNNTDLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 240

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 241 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 300

Query: 251 TRNKVSASLLSMGFYNKTDRK----KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            R   S  L+  GF N   +K    K N +     +++     P     V   +     Y
Sbjct: 301 ERFTESRELIEYGFNNFEKQKLKVDKNNTLSVAQGKEDQVTVAPEKEITVIAKKGSKNPY 360

Query: 307 NTQMKEAKDKES---HFIDFEKITLLKNKITK 335
               +  K            +K   + +   +
Sbjct: 361 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 392


>gi|296268658|ref|YP_003651290.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thermobispora
           bispora DSM 43833]
 gi|296091445|gb|ADG87397.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thermobispora
           bispora DSM 43833]
          Length = 388

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 13/262 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
               K   Y + D +TG V+A   P   + PAS  K +TA  +   L +K+      +  
Sbjct: 62  PPKTKAAAYLVADADTGDVLAAKDPHGHYRPASTLKALTAITLIPKLDKKRV-----VRP 116

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S  A     S          T+++  + L++ S ND A A+AE+     K     MN  +
Sbjct: 117 SPEACNEEGSAVGLVPKPIYTVEDLFRALLMVSGNDAANALAEANGGMRKTL-AEMNQVA 175

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGK 198
           + L    T      G+ + G  ++A D+A+++       P +  Y   K  +        
Sbjct: 176 RRLQAYDTVAKTPSGLDRPGQRSSAYDLALIARAGLA-MPDFRRYVSTKVAKFPAPKGHY 234

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  N N  +G + G  G+K G+T  +  + V +A +   ++I VI+            A 
Sbjct: 235 EIANHNRLLGRYQGMIGVKNGWTSKALGSFVGAATRNGHTIIVVIMRHPGWF--WDEVAD 292

Query: 259 LLSMGFYNKTDRKKINYIIKDF 280
           LL  GF  +     +  ++   
Sbjct: 293 LLDWGFAVRGKVTPVGTLVPPL 314


>gi|209558811|ref|YP_002285283.1| Penicillin-binding protein 7 precursor (PBP-7) (D-alanyl-D-alanine-
           endopeptidase) [Streptococcus pyogenes NZ131]
 gi|209540012|gb|ACI60588.1| Penicillin-binding protein 7 precursor (PBP-7) (D-alanyl-D-alanine-
           endopeptidase) [Streptococcus pyogenes NZ131]
          Length = 395

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 27/353 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+A+++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAVIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
           N  +K  Y  +   +   +         + I+  T+      K+S   D   I
Sbjct: 302 NKPVKTLYVLDSPEKTVKLVAPNSLFFIKPIHTKTKNTVHITKKSSTNDRTSI 354


>gi|258651532|ref|YP_003200688.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Nakamurella
           multipartita DSM 44233]
 gi|258554757|gb|ACV77699.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Nakamurella
           multipartita DSM 44233]
          Length = 550

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 10/257 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                  ++        + + D +TG V+A   P   + PAS  KL+TA V+   L    
Sbjct: 97  IVPANSPALPSDISAGAWLIADLDTGEVLAAKDPHGRYRPASTLKLLTAQVMLKNLT--- 153

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   +  ++  +    +    + G T T+ + L  L++ S ND A A+A +    +K 
Sbjct: 154 -NLDQVVQGTQADTAQDGTRVGIEAGGTYTVRDLLSYLVMISGNDAANALARTNGGYDKT 212

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
               MN T+K LG   T      G+   G  T+A D+A+ +        FP+ +    I+
Sbjct: 213 IAD-MNATAKALGALDTRAATPSGLDGPGQSTSAYDLALFAKADMAIAPFPEIIARPDIR 271

Query: 192 GLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                G+ Y   N N  +  + GA G KTGFT  +G   V  A +  + L+  ++    +
Sbjct: 272 VPAASGEGYIAANDNQLLAQYPGALGGKTGFTDDAGNTFVGMAAKDGRRLVVTMMHGTQQ 331

Query: 250 NTR-NKVSASLLSMGFY 265
             R    +ASLL  GF 
Sbjct: 332 PRRQWMQAASLLDWGFA 348


>gi|229091549|ref|ZP_04222757.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|228691773|gb|EEL45522.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
          Length = 338

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   + P   A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIVQAKSAILIDANSGEVVYKKNEETPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L E    L   + IS        S          T+ + L  L++   N  A+A+
Sbjct: 71  ITLEQLNEGTIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHTLLLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E KF Q MN  +K+L    ++ F+NA G+    +    TTA ++A L+ ++ T
Sbjct: 131 AEHIAGNEDKFTQLMNEKAKHLKLSQSSPFLNATGMNNDTNKLSTTTAIEVAKLATQLVT 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A QGD  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKQGDTRLISVILDAENENSTFIETKKLLQYGFD 284


>gi|196040350|ref|ZP_03107651.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
 gi|196028835|gb|EDX67441.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
          Length = 338

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   +     A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIVQAKSAILIDANSGEVVYKKNEETSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N  A+A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHTLLLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E KF Q MN  +K+L    ++ F+NA G+    +    TTA ++A L+ ++ T
Sbjct: 131 AEHIAGNEDKFTQLMNEKAKHLKLSQSSPFLNATGMNNDTNKLSTTTAIEVAKLATQLVT 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A QGD  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKQGDTRLISVILDAENENSTFIETKKLLQYGFD 284


>gi|328880472|emb|CCA53711.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces venezuelae ATCC
           10712]
          Length = 421

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 101/287 (35%), Gaps = 16/287 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
               P            + + D ++G V+A         PAS  K + A     + +   
Sbjct: 66  VQPLPGAPGVPEVSALSWVVADASSGEVLAARNAHRKLPPASTLKALFALTALPYQEP-- 123

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 +  S+       S+    K       + L   +  S+ + AV +  ++    + 
Sbjct: 124 -SAQHTVADSELTGIGDGSSLVGVKEGYTYKVSDLWNGVFLSSGNDAVHVLAAMNGGWES 182

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
             + M   +++LG   TH ++  G    G  ++A D+A+       D   +  Y      
Sbjct: 183 MSRRMQEKARSLGAMDTHVVSPDGYDAPGQVSSAYDLAVFGRAGLQDPA-FTKYCSTAYA 241

Query: 194 EIKGKKYP----NTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           +     +     NTN        V  + G  G+K G+T  +G  ++++A +GD++L+  +
Sbjct: 242 DFPAGSWSYGIANTNRLLTGADGVARYPGLIGIKNGYTSNAGNTLISAARRGDRTLVVSV 301

Query: 244 LG--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           +           + +  LL  GF      + +  ++    +   S  
Sbjct: 302 MNPQGGGGLAVYEEARDLLDWGFAAAGRVQPVGSLLPVRTKAAGSAA 348


>gi|315505734|ref|YP_004084621.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Micromonospora
           sp. L5]
 gi|315412353|gb|ADU10470.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Micromonospora
           sp. L5]
          Length = 428

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 103/260 (39%), Gaps = 11/260 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             + P            + + D +TG V+       P  PAS  KL+ A  + S L  K 
Sbjct: 81  LVVPPGSPAPPAVTATTWLVADLDTGEVLGACGAHVPGTPASTQKLLLAATMLSRLDPKH 140

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             + T         E   S      G   +++     L+++S ND A  +A     + + 
Sbjct: 141 VAVATRA---DLDIEPGSSAVGLLVGGRYSVETLWLGLLLQSGNDAANMLARLGAGSAQA 197

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-------PQYMH 186
            V  MN  ++ LG   TH +   G+   G +T+A D+A+++     D         +   
Sbjct: 198 GVAEMNEQARRLGAGQTHAVTPSGLDGPGQFTSAYDLALIARACFADAAFRRYALTERTQ 257

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 L+  G +  N N  +  + GA G KTGFT  +  + V +A +  + L+  +LGA
Sbjct: 258 IPAQPALKKGGFQIQNENQLIYRYPGALGGKTGFTELARHSYVGAAQRDGRRLVVTLLGA 317

Query: 247 LDRNTR-NKVSASLLSMGFY 265
             R  R  +  A LL   F 
Sbjct: 318 EARPVRGWQQGAQLLDWAFR 337


>gi|302867864|ref|YP_003836501.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570723|gb|ADL46925.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Micromonospora
           aurantiaca ATCC 27029]
          Length = 427

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 103/260 (39%), Gaps = 11/260 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             + P            + + D +TG V+       P  PAS  KL+ A  + S L  K 
Sbjct: 80  LVVPPGSPAPPAVTATTWLVADLDTGEVLGACGAHVPGTPASTQKLLLAATMLSRLDPKH 139

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             + T         E   S      G   +++     L+++S ND A  +A     + + 
Sbjct: 140 VAVATRA---DLDIEPGSSAVGLLVGGRYSVETLWLGLLLQSGNDAANMLARLGAGSAQA 196

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-------PQYMH 186
            V  MN  ++ LG   TH +   G+   G +T+A D+A+++     D         +   
Sbjct: 197 GVAEMNEQARRLGAGQTHAVTPSGLDGPGQFTSAYDLALIARACFADAAFRRYALTERTQ 256

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 L+  G +  N N  +  + GA G KTGFT  +  + V +A +  + L+  +LGA
Sbjct: 257 IPAQPALKKGGFQIQNENQLIYRYPGALGGKTGFTELARHSYVGAAQRDGRRLVVTLLGA 316

Query: 247 LDRNTR-NKVSASLLSMGFY 265
             R  R  +  A LL   F 
Sbjct: 317 EARPVRGWQQGAQLLDWAFR 336


>gi|228975468|ref|ZP_04136023.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228784262|gb|EEM32286.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 441

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 121/332 (36%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 61  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAES----LCKTEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +    L ++EK F+   N  +K LGL    F+
Sbjct: 121 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAESEKNFLNLANEHAKKLGLKKYKFV 180

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 181 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKVMITKYPEMLEDTKQRFRNFPDNH 240

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 241 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDLRLISVIIKTKSMD 300

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            R   S  L+  GF N   +K                +   ++ E   T           
Sbjct: 301 ERFTESRELIEYGFNNFEKQKLKVDKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKDPY 360

Query: 311 KEAKDKES-------HFIDFEKITLLKNKITK 335
           K   + +             +K   + +   +
Sbjct: 361 KIGTELDKSLAEDGHLVAPVKKDAKVGSITLE 392


>gi|196043568|ref|ZP_03110806.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
 gi|196025877|gb|EDX64546.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
          Length = 338

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   +     A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEETSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N   +A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ R+ T
Sbjct: 131 AEHIAGNEDNFTQLMNEKAKQLKLSQPFPFLNATGMNNGTNKLSTTTAIEVGKLATRLVT 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++   +   K     N     +         G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL + + N+    +  LL  GF 
Sbjct: 251 AQRGDTRLISVILDSNEENSTFIETKKLLQYGFD 284


>gi|291548476|emb|CBL21584.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. SR1/5]
          Length = 415

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/306 (19%), Positives = 112/306 (36%), Gaps = 15/306 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           V ++  + +N                 +++  +  ++     D   +PA   K+MT  + 
Sbjct: 33  VAVSSGVTTNGISGWPQGPEITSASAVIMEDISDTILYAKDMDTTLSPAGAVKIMTCLLA 92

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
               +    +  T   +S        ++ + + G   T++  L  L++ SANDIA+ +AE
Sbjct: 93  LENSQLDDQVTMTETGVS--GVTDGGAHISSQLGEVFTMEQCLYALMLASANDIALQVAE 150

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
            +  +   FVQ MN+ +K LG + T F N  G+     +TTA D+A++      +     
Sbjct: 151 QIGGSVDAFVQKMNDRAKELGCTNTVFTNPTGLPDDNQHTTAHDLALIMQAAIRNDSFRT 210

Query: 186 HYFQIKG-----------LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                               +          +   + G  G +   T ASG  +V +A +
Sbjct: 211 ISGATSYTIPATNVSGGTRNLTSSFTMTDPASASYYEGCIGGRESTTTASGSVLVTAAQR 270

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
              +LIAV++      T    + SLL  GF N       +                  + 
Sbjct: 271 NGTTLIAVVMNGATGQT-ATEAISLLDYGFSNFQLLDL-SEDDFHILSGGTVMVPSGATA 328

Query: 295 EVCTTQ 300
           +  TT+
Sbjct: 329 DDLTTE 334


>gi|238852512|ref|ZP_04642924.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus gasseri
           202-4]
 gi|238834859|gb|EEQ27084.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus gasseri
           202-4]
          Length = 308

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/291 (21%), Positives = 119/291 (40%), Gaps = 30/291 (10%)

Query: 5   LVIIAMAML---------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +V+IA+  L         S    + +      +     +D   G+VI     +     AS
Sbjct: 18  IVVIAICFLLWKNNFGPNSMPSNYHANQVDLNVKSAVAIDAKNGNVIYAKNANQSLPIAS 77

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLL 111
           +TKL+TAY+    +KEKK    T ++ ++           ++     G   T+       
Sbjct: 78  MTKLLTAYLTLKAIKEKKISWDTTVSPTQEIINLGSNPDYASVPLNLGQKYTVKELYDAA 137

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH---------- 161
           ++KSAN+ A  +A ++   E  F+  M   +    L    F+   G+ +           
Sbjct: 138 LIKSANNAARMLAIAVSGNETNFLNQMRQQANKWKLHNVKFVTVDGLPEKKKNFLGMTTT 197

Query: 162 -GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGAD 214
             +  +A DMAI++ ++ TD+P+ ++  ++     +     N+N               D
Sbjct: 198 IENKMSANDMAIIARKLVTDYPEVLNTTKVAKTYFRNTLMTNSNKMLNGLSDYDPNYPVD 257

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           G+KTG T  +G     +  + ++ +I VILGA + N R   +  LL+  F 
Sbjct: 258 GLKTGTTDGAGSCFTCTVDKNNKRVITVILGAQNDNERFSETKKLLNYSFN 308


>gi|229084940|ref|ZP_04217192.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-44]
 gi|228698256|gb|EEL50989.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus Rock3-44]
          Length = 340

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 12/254 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              ++    ++D + G V+ +N  +    PAS++K+MTAY++   +   K      + IS
Sbjct: 84  PVVEVKAAMIIDASDGQVMYKNNEEEQLAPASMSKMMTAYILLENIHNGKVHWDDQVKIS 143

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             +++   +    + G  +T+ +    L+++SAN+ AVA+AE + KTE+ F Q MN T+K
Sbjct: 144 AKSAQAEGARIPVQTGDVLTVKDLYHALMIQSANNSAVALAEHMAKTEQDFAQVMNQTAK 203

Query: 144 NLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
            L LS  T F NA G+          T  D+A L++R+  D+P+ +    ++  ++    
Sbjct: 204 QLELSEATKFANASGLQEADGSETKMTVADVAKLAYRLVKDYPEILDVTHLRQSQLAFNN 263

Query: 200 YP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     N         G DG+KTGFT ++G+    +A QGD+ ++ V++G      
Sbjct: 264 ITVTSTNEMLNPANQELYMEGMDGLKTGFTDSAGYCFTGTAKQGDKRIVTVVMGTKSEMK 323

Query: 252 RNKVSASLLSMGFY 265
           R   +  L+S GF 
Sbjct: 324 RFTETHKLMSYGFE 337


>gi|312897437|ref|ZP_07756861.1| serine-type D-Ala-D-Ala carboxypeptidase [Megasphaera
           micronuciformis F0359]
 gi|310621498|gb|EFQ05034.1| serine-type D-Ala-D-Ala carboxypeptidase [Megasphaera
           micronuciformis F0359]
          Length = 326

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/316 (20%), Positives = 126/316 (39%), Gaps = 20/316 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  +   +  L     F             L+D  TG V+     D    P   T +M
Sbjct: 6   MKKLALCAMVWCLGLASSFAVSDGEIHARAAVLMDAQTGEVLYSKNGDEKLYPGGTTMIM 65

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSAND 118
           TA +          +L   +  S + ++     +         +TL NAL  ++  +  D
Sbjct: 66  TALLGAEA---GDTVLDGAVHFSDDVTKLDRDVAVLGISADHPVTLRNALTAMMTYTGCD 122

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+  A ++  +   FV  MN+ +  +G + THF N HG+    H +TA+D+A ++    
Sbjct: 123 AALDTAVTVAPSVADFVHMMNDKAVAIGATNTHFTNPHGLPDANHVSTAKDLAKIAVYAM 182

Query: 179 TDF----PQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAI 233
            +           F +       ++  + N +    + GA+G+KTG T   G  +VASA 
Sbjct: 183 QNQTFKSFTGRTSFVMPYTNGGSQEVFSMNEFLNSGYKGANGIKTGATDYGGATLVASAT 242

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           +GD++ +  IL +   + R+  +  L+   F   T    ++        ++  + V    
Sbjct: 243 RGDKTYVVSILNS---DNRSGDAKLLMDFAFAETTAIDAVSK-------EDGKSAVAEKK 292

Query: 294 EEVCTTQKEIINYNTQ 309
           E   T +++   Y  +
Sbjct: 293 ENKTTPEEDAEAYTLR 308


>gi|331092072|ref|ZP_08340903.1| hypothetical protein HMPREF9477_01546 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330402273|gb|EGG81844.1| hypothetical protein HMPREF9477_01546 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 423

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 29/331 (8%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN                 ++D  TG ++     D    PAS+TK++TA V     +   
Sbjct: 51  SNAIQNWPQGPQVYGDSAIVMDMKTGAILYAKGIDEERYPASITKILTALVAIENSQ--- 107

Query: 74  AMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             +T  +  S+ + +      ++   K G  +T+ +AL  L++ SAN++A AI E++  T
Sbjct: 108 --MTDMVKFSEESIQSLEPGYAHIAMKAGEEITMKDALHALMLASANEVAYAIGETVGGT 165

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD---------- 180
            + F++ MN+ +K LG + THF+N +G+    HYT+ARDMA+++    +           
Sbjct: 166 HENFIKMMNDKAKELGCTHTHFINTNGMFDEQHYTSARDMALIARAAFSHQELLDIVQTL 225

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                         I  +K+              G KTG+T  +   +V    QGD  ++
Sbjct: 226 QYTIPPTNMESEPRIFQQKHKMLLNGKYHDNRCIGGKTGYTEKAYNTLVTVMEQGDMEIV 285

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AVI+    R    + +  +    F N  +                S++V +I  E C T 
Sbjct: 286 AVIM--RSRRDTFEDTKKICDYAFNNFREVNISA--------NEKSDKVSDIDGEACVTL 335

Query: 301 KEIINYNT-QMKEAKDKESHFIDFEKITLLK 330
            + I +N    +  KDK ++  + + +   K
Sbjct: 336 PKNIEFNQLSRQYEKDKVNYCYEGQFVGETK 366


>gi|295835113|ref|ZP_06822046.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. SPB74]
 gi|295825314|gb|EFG64181.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. SPB74]
          Length = 322

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 20/262 (7%)

Query: 23  AETNKLPYYTLLDTNTG----HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           A   +  +  LLD   G     + A    D     AS TK+MTA VV    +  +  +T 
Sbjct: 63  APAVEAGHAFLLDARDGSQERELWAGADADESVPVASTTKIMTAVVVLKHPEWLERRITV 122

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK------TEK 132
                    E   S +  + G T+T    L  +++ S  D A A+A++            
Sbjct: 123 KQEYRDYVQEVGASTADLQTGDTLTARQLLHAMLIPSGADAARALADNFGNGDTEEARIA 182

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F+  MN  ++ LGL  THF +  G+ Q  +++TARD+A L  R              + 
Sbjct: 183 DFIAQMNAEAQQLGLKGTHFDSVDGISQGNNHSTARDLAKLGQRAMLQPVFAEVVKNTQY 242

Query: 193 LE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                      +   + NTN  +GT+ GA G+KTG     G+ +V +A + +++LI V+L
Sbjct: 243 KTEAPAANGRTRYYTWNNTNELLGTYDGALGVKTGSGPEDGYCVVFAAERDNRTLIGVVL 302

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
           G  D   R   +  +L  GF +
Sbjct: 303 G--DDEGRFDDATKILDWGFAH 322


>gi|325697563|gb|EGD39449.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK160]
          Length = 409

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 124/356 (34%), Gaps = 41/356 (11%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +            +D  +G ++ E   + P    S+T L+T Y+V+  ++       T 
Sbjct: 7   AADDYNIAAKSAIAVDATSGKILYEKDANTPIEVGSITNLLTVYLVYEAIERGDLTADTY 66

Query: 80  ITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           + IS  A         ++   +     + + +   ++ SAN   +A+AE +  +E+ FVQ
Sbjct: 67  VDISDYAYNLTADPNISNIPLEAKRYKVKDLIAASLMSSANSATIALAEKVGGSEENFVQ 126

Query: 137 HMNNTSKNLGLSATHFMNAHGVV------------------------QHGHYTTARDMAI 172
            M    K  G+     +N+ G+                            +  +A D+A+
Sbjct: 127 MMKAKLKEWGIKDATIVNSTGLNTLLLEYASEETDYTASASTAKKSKDTENKFSAYDLAV 186

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNI 228
           +S  +  DFPQ          +I G    N N+          G DG+K G +   G + 
Sbjct: 187 ISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNFRSGVDGLKAGISEKGGSSF 246

Query: 229 VASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK------ 278
           VA+  +    +I V+L       D   R   +ASL++    N T    +           
Sbjct: 247 VATTTENGIRMITVVLDVEQTDGDPYARFVATASLMNYVSQNFTQTTIVAEGEAYNKSHS 306

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                         S++    ++       +++ + +++      +K T L     
Sbjct: 307 TVIDGKQKTVPAVASKDFTIIERIANQAEHKVEFSTNEKGFQAPLKKNTELGTLTY 362


>gi|229187618|ref|ZP_04314756.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228595870|gb|EEK53552.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
          Length = 441

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 75/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 61  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 121 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 180

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 181 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 240

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 241 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 300

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            Q           +E+    K+      
Sbjct: 301 ERFTESRELIEYGFNNFKKQKLKVDKNNTLSVVQGKEDQVTVAPEKEITVIAKKGSKNPY 360

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 361 KIGTEVDKSLAEDGHLVAPIKKDAKVGSITLE 392


>gi|325675587|ref|ZP_08155271.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus equi ATCC
           33707]
 gi|325553558|gb|EGD23236.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus equi ATCC
           33707]
          Length = 444

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/337 (17%), Positives = 107/337 (31%), Gaps = 29/337 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + L D +TG V+A   P   + PAS  K++ A V        
Sbjct: 106 VVTAPGTPPLPAEISATGWVLSDLDTGQVLAAKDPHGRYRPASTIKVLLALVALDE---- 161

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L T I  +  A+    S+     G T +    ++ L+++S ND A A+A+     E+
Sbjct: 162 -LDLDTTIVANPEAASMEGSSVGLGAGGTYSNLQLMQGLVMRSGNDAAQALAQ-QLGGEQ 219

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP---------- 182
             V  MN  + +LG S T   +  G+   G  T+  D+A+       +            
Sbjct: 220 ATVAKMNAKAASLGASDTRTASVSGLDGPGMSTSPYDLALFFRAAMQNPTFAGLITTDTV 279

Query: 183 ----QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                     +     +      N N  +  + GA G KTG+T  +    V  A +  + 
Sbjct: 280 MFPGHPADPTKPDDKPVDPYPIFNDNQLLANYPGALGGKTGYTDDARQTFVGGAERDGRR 339

Query: 239 LIAVILGALDRNTR-NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
           L   ++ A     R  +    LL  G+                            + +V 
Sbjct: 340 LAVTLMAADVLPIRPWEQVGRLLDYGWA--------LDPAVSVGVLVDPKGADEPAVQVA 391

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             +            +            I ++ + I 
Sbjct: 392 GPETHGPGGMDLASGSDLPNKEVAGRVAIGIVGSGIV 428


>gi|116513223|ref|YP_812130.1| D,D-carboxypeptidase PBP3 [Lactococcus lactis subsp. cremoris SK11]
 gi|116108877|gb|ABJ74017.1| D,D-carboxypeptidase PBP3, Serine peptidase, MEROPS family S11
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 434

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 82/382 (21%), Positives = 145/382 (37%), Gaps = 50/382 (13%)

Query: 1   MRQFLVIIAMAMLS---------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DHP 50
           M++  +I    ++S         +     +   T        +D ++G ++      D  
Sbjct: 1   MKKIAIIFCTLLMSLSVLSGFAVSADTTTTNNFTVAAKSAIAIDASSGKILYAQNADDAS 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDN 106
              AS+TKL+TAY+V+  + E K   TT + IS  A         SN    +    T+ +
Sbjct: 61  TRIASITKLLTAYLVYKNVAENKLTWTTKVPISDYAYELTQNSNASNIPLAQNGQYTVKD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---- 162
            L  L++ SAN  AVA+AE +  +E KFV  M    K+ G++ +H +NA G+        
Sbjct: 121 LLNALLLPSANSAAVALAEKIAGSEPKFVDMMTAQMKDWGITDSHLVNASGLPNDDLNGH 180

Query: 163 ----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAV 207
                     +  +A+ +A LS+ +  DFP+ +   +   +             NTN  +
Sbjct: 181 IYPGSGASATNTMSAKAVATLSYHLIQDFPEVLQITKKTEIPFDTGNEEKMTLTNTNQML 240

Query: 208 GTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASL 259
             F     G DG+KTG T         +  Q    +I V+L A D     +T   ++  L
Sbjct: 241 SGFSTSRTGVDGLKTGSTSFQIDCFAGTTNQNGFRIITVVLEATDPAADNSTPFTLTNQL 300

Query: 260 LSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           ++  + +      +          +          V  ++ +  T     + Y T     
Sbjct: 301 MNYVYGHWRTTNLVQKNQSLDDFKEIAVTDGKEKSVQLVAPQNVTPV---VPYATDGSAD 357

Query: 314 KDKESHFIDFEKITLLKNKITK 335
                   D +K   ++  ITK
Sbjct: 358 TKPLVIKFDKKKNATVEATITK 379


>gi|229173210|ref|ZP_04300759.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
 gi|228610294|gb|EEK67567.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
          Length = 338

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL  +  A++   F         +     L+D N+G V+ +   + P   A+L+KLMT Y
Sbjct: 11  FLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEETPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L E K  L   + IS        S          T+ + L  L +   N  A+A+
Sbjct: 71  ITLEQLNEGKIQLDELVKISNEVFRAETSPIQVTSKDKTTVRDLLHALFLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN  +K L LS      NA G+    +    TTA D+A L+ ++  
Sbjct: 131 AEHIAGNEDNFTLLMNEKAKQLKLSQPSPFLNATGMNNDTNKQSTTTAIDVAKLATQLVK 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNITELTSYQFTFKDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL + + N+    +  LL  GF 
Sbjct: 251 AKRGDTRLISVILDSNEENSTFIETKKLLQYGFD 284


>gi|169630315|ref|YP_001703964.1| D-alanyl-D-alanine carboxypeptidase DacB [Mycobacterium abscessus
           ATCC 19977]
 gi|169242282|emb|CAM63310.1| Probable D-alanyl-D-alanine carboxypeptidase DacB [Mycobacterium
           abscessus]
          Length = 287

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 101/275 (36%), Gaps = 18/275 (6%)

Query: 3   QFLVIIAMAMLSNI------FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           + L ++++  LS +          +         + + D ++G ++A   P     PAS 
Sbjct: 11  RALAVLSVLFLSTLPVGVARADMAAPPPEGPAQAWLVADLDSGQILAARDPYATHAPAST 70

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++ A V    +     ++          +         K G T T    L   +++S 
Sbjct: 71  IKVLLALVALDEVPMDATVVADAADAKAECNCV-----GIKAGQTYTARELLDAALLESG 125

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT--ARDMAILS 174
           ND A  +A  L    +  V  MN  +  LG ++TH  +  G+   G        D+A++ 
Sbjct: 126 NDAANTLA-HLLGGRQATVDKMNAKAAALGATSTHTDSPSGLDAPGMDMRTSPHDLAVIF 184

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                + P +            G+   N N  +  + G  G KTGFT  +    V +A +
Sbjct: 185 RAALAN-PVFAEITAQPSAPFPGRGLHNQNELMYRYPGVIGGKTGFTDIARKTYVVAAER 243

Query: 235 GDQSLIAVILGA---LDRNTRNKVSASLLSMGFYN 266
             + L+  ++         T    +ASL   GF N
Sbjct: 244 DGKRLVVSMMYGLVHEGGPTYWDQAASLFDWGFVN 278


>gi|28210687|ref|NP_781631.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
 gi|28203125|gb|AAO35568.1| D-alanyl-D-alanine carboxypeptidase [Clostridium tetani E88]
          Length = 419

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 73/360 (20%), Positives = 140/360 (38%), Gaps = 25/360 (6%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M++  +  ++A  M+ +    +  A               LD +TG +I    PD    P
Sbjct: 1   MKKKFISSLLATFMIFSSTSGVYAANTNTQPNIYGKSAITLDMDTGEIIYAKSPDDKMYP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TKL+T+ ++     +   +  T     +       +      G TM   +A+  L++
Sbjct: 61  ASTTKLITSLLLAENKNKDDDLTYTKDAKDQPEYSLNKNLHAISVGETMKASDAMDGLLL 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND+A  I +++    + F + MN  +K+L L  ++F+N +G+    HYTT+ D++IL
Sbjct: 121 YSGNDVAYLIGDNIGGNREGFAKLMNEKAKSLNLKNSNFVNPNGLHHKDHYTTSYDLSIL 180

Query: 174 SWRIKTDFPQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                 +             +   +       N N  VG+  G  G KTG+T A+G  +V
Sbjct: 181 GRAAYKNPWVSETMAKKNSSVSTSKGTTFLIENRNKLVGS-KGCVGGKTGYTSAAGRCLV 239

Query: 230 ASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDR----------KKINYI 276
           A   +  + ++ V+L +    + +        ++   +  +             K ++Y 
Sbjct: 240 AIFDRDGRKILGVVLNSVYDANDSFVFNDMEKIIDWSYKAEKTILHNKDSVVGTKTVSYK 299

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              F     + +VP I +E       +IN N   +       +     K   +     K+
Sbjct: 300 PLLFMGPVKTIDVPLIVKEDVAYYNNVINKNEFKESVSLNTENPWKLAKSDSVGKLTIKE 359


>gi|15674245|ref|NP_268420.1| D-alanyl-D-alanine carboxypeptidase [Lactococcus lactis subsp.
           lactis Il1403]
 gi|12725334|gb|AAK06361.1|AE006455_7 D-alanyl-D-alanine carboxypeptidase [Lactococcus lactis subsp.
           lactis Il1403]
          Length = 435

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 77/391 (19%), Positives = 143/391 (36%), Gaps = 58/391 (14%)

Query: 1   MRQFLVIIAMAMLS----------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DH 49
           M++  +I    ++S                +   T        +D ++G ++      D 
Sbjct: 1   MKKIAIIFCSFLISLSVLSDFSVSAATTPTTNDFTVAAKSAIAIDASSGKILYAQNSDDA 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLD 105
               AS+TKL+TAY+V+  + E K    T + IS  A         SN    +    T+ 
Sbjct: 61  STRIASITKLLTAYLVYKNVAENKLTWNTKVPISDYAYELTQNSNASNIPLAQNGQYTVK 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--- 162
           + L  L++ SAN  AVA+AE +  +E KFV  M    K+ G++ +H +NA G+       
Sbjct: 121 DLLNALLLPSANSAAVALAEKIAGSEPKFVDMMTKQMKDWGITDSHLVNASGLPNDDLNG 180

Query: 163 -----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWA 206
                      +  +A+ +A LS+ +  DFP+ +   +   +             NTN  
Sbjct: 181 HIYPGSGASATNTMSAKAVATLSYHLIQDFPEILQITKKTEIPFDTGNEAKMTLTNTNQM 240

Query: 207 VGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSAS 258
           +  F     G DG+KTG T         +  Q    +I V+L A D     +T   ++  
Sbjct: 241 LSGFSTSRTGVDGLKTGSTSFQIDCFAGTTNQNGFRIITVVLEATDPAADNSTPFTLTNQ 300

Query: 259 LLSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQ----------KE 302
           L++  + +      +          +          V  ++ +  T             +
Sbjct: 301 LMNYVYGHWRTTSLVQKNQSLDDFKEITVIDGKEKSVQLVAPQNITPVVPYATDGSADTK 360

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
            +      ++    E+     +K+  L   +
Sbjct: 361 SLTVKFSKEKTASVEATVTKNQKLVTLSTTV 391


>gi|301054094|ref|YP_003792305.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis CI]
 gi|300376263|gb|ADK05167.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 327

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/271 (26%), Positives = 116/271 (42%), Gaps = 12/271 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +  A++   F         +     L+D N+G V+ +   +     A+L+KLMT Y+V 
Sbjct: 3   FVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEETSIQSATLSKLMTEYIVL 62

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             L +    L   + IS        S          T+ + L  L++   N   +A+AE 
Sbjct: 63  EQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLALAEH 122

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKTDFP 182
           +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ R+ TDFP
Sbjct: 123 IAGNEDNFTQLMNEKAKQLKLSQPSPFLNATGMNNGTNKLSTTTAIEVGKLATRLVTDFP 182

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVASAIQ 234
             ++  ++   +   K     N     +         G DG++T F+  S ++ V++A +
Sbjct: 183 DVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNSNYSFVSTAKR 242

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           GD  LI+VIL A   N+    +  LL  GF 
Sbjct: 243 GDTRLISVILDADSENSTFIETKKLLQYGFD 273


>gi|240169097|ref|ZP_04747756.1| penicillin-binding protein DacC [Mycobacterium kansasii ATCC 12478]
          Length = 408

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/295 (20%), Positives = 110/295 (37%), Gaps = 12/295 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +A   +        +        + + D ++G VIA   P     PAS+ K++ A    
Sbjct: 76  ALAGCGIITAPDTPPVPGDVSAEAWLVADLDSGAVIAARDPHGRHRPASIIKVLVAMAAI 135

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           +        L   +  + + +    +      G T T++  L  L++ S ND A A+A  
Sbjct: 136 NE-----LNLNKSVAGTDDDAAAEGTKVGVDAGGTYTVNQLLHGLLMHSGNDAAHALARQ 190

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--- 183
           L   +    + +N  +  LG   T      G+   G  T+A D+ +       +      
Sbjct: 191 LGGMQMAL-EKINVLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWRNPTFADI 249

Query: 184 --YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                Y      +  G +  N N  +  + GA G KTG+T  +G   V +A +  + L+A
Sbjct: 250 VATRSYDFPGHGDHPGYELENDNQLLYHYPGALGGKTGYTDDAGQTFVGAANRNGRRLMA 309

Query: 242 VIL-GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           V+L G        + +A LL  GF      +  + I  D    +  ++  N   +
Sbjct: 310 VLLHGTRQPIAPWEQAAHLLDYGFSTPAGTQVGSLIEPDPALASGKDKPANRQPD 364


>gi|52142940|ref|YP_083889.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|51976409|gb|AAU17959.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
          Length = 338

 Score =  135 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ ++G V+ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINAHSGEVVYKKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E    L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYITLEQLNEGTIQLDEVVKISNEVFRAETSPIQVISKDKTTVRDLLHTLLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E KF Q MN  +K L LS      NA G+    +    TTA ++A 
Sbjct: 124 NRSALALAEHIAGNEDKFTQLMNEKAKQLKLSQLSPFLNATGMNNDTNKLSTTTAIEVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++   +   K     N     +         G DG++T F+  S
Sbjct: 184 LATQLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNS 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAKRGDTRLISVILDADNENSTFIETKKLLQYGFD 284


>gi|324992344|gb|EGC24265.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK405]
          Length = 409

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/361 (17%), Positives = 123/361 (34%), Gaps = 41/361 (11%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +            +D  +G ++ E   + P    S+T L+T Y+V+  +     
Sbjct: 2   TASKVAADDFNIAAKSAMAVDATSGKILYEKDANTPIEVGSITNLLTVYLVYEAIDRGDL 61

Query: 75  MLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              T + IS  A      P  ++   +       + +   ++ S+N   +A+AE +  +E
Sbjct: 62  TADTYVDISDYAYTLTSNPNISNVPLEAKRYKAKDLIAASLMSSSNSATIALAEKVGGSE 121

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV------------------------QHGHYTTA 167
           + FVQ M    K  G+     +N+ G+                            +  +A
Sbjct: 122 ENFVQMMKAKLKEWGIKDATIVNSTGLNTLLLEYATEETEYSTSASTAKKSKDTENKFSA 181

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCA 223
            D+A++S  +  DFPQ          +I G    N N+          G DG+K G +  
Sbjct: 182 YDLAVISRHLIMDFPQVTDITSKSTAKIAGTSLENYNFMLENQSNFRSGVDGLKAGSSDK 241

Query: 224 SGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIK- 278
            G + VA+  +    +I V+L       D   R   +ASL++    N T    +      
Sbjct: 242 GGSSFVATTTENGIRMITVVLDVDQTDGDPYARFVATASLMNYVSQNFTQTTIVAEGEAY 301

Query: 279 -----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                              +++    ++       +++ + +++      +K T L    
Sbjct: 302 NKSHSTVIDGKQKTVPAVANKDFTIIERIANQAEHKVEFSTNEKGFQAPLKKNTELGTLT 361

Query: 334 T 334
            
Sbjct: 362 Y 362


>gi|291005226|ref|ZP_06563199.1| putative penicillin-binding protein [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 365

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 11/245 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                + L D  +G V+A         PAS  K++TA V           ++  +  ++ 
Sbjct: 43  VSAASWILADVTSGEVLAARDSHARHRPASAIKVLTALVAIR-----DLNMSDTLVATQA 97

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
            ++   S      G T T++  +  L+++S ND A A+A  L    +     MN  + +L
Sbjct: 98  DADQEGSRVGLHPGVTYTVEQVVTGLLMQSGNDAAHALAMKL-GGPEVMTARMNELAHHL 156

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----QYMHYFQIKGLEIKGKKYP 201
           G   T      G+   G  ++A D+A++                 +  + G   +  +  
Sbjct: 157 GALDTRAATPSGLDGPGMSSSAYDLALVFRAAMQRPEFARAINTQHTVLPGPPGQPLEVW 216

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSASLL 260
           + N  +  + GA G KTGFT  +    +A+A +  + ++AV+L   ++  R +  +  LL
Sbjct: 217 SDNAVLLNYAGALGGKTGFTDDARHTFIAAAERDGRRIVAVLLRGENQPLRLSSQTMRLL 276

Query: 261 SMGFY 265
             GF 
Sbjct: 277 DYGFT 281


>gi|254820249|ref|ZP_05225250.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium intracellulare
           ATCC 13950]
          Length = 407

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 101/265 (38%), Gaps = 12/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +A   +        +        + + D ++G VIA   P     PAS+ K++ A    
Sbjct: 73  ALASCGIVAAPNTPPLPGDVSAEAWLVADLDSGAVIAAKDPHGRHRPASIIKVLVAMAAI 132

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                    L   +  + + +    +    ++G   T++  L  L++ S ND A A+A  
Sbjct: 133 -----NTLNLNKSVAGTADDAAAEGTKVGVQEGGVFTVNQLLHGLLMHSGNDAAHALAMQ 187

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ--- 183
           L   ++   + +N  +  LG   T      G+   G  T+A D+ +       +      
Sbjct: 188 LGGMQQAL-EKINVLAAKLGGQDTRVATPSGLDAPGMSTSAYDIGLFYRYAWQNPTFANI 246

Query: 184 --YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                +      +  G +  N N  +  + GA G KTG+T  +G   V +A    + L+A
Sbjct: 247 VATRTFDFPGHGDHPGYELENDNQLLYKYPGALGGKTGYTDDAGQTFVGAANHDGRRLVA 306

Query: 242 VIL-GALDRNTRNKVSASLLSMGFY 265
           V+L G        + +A LL  GF 
Sbjct: 307 VLLHGTRQPIAPWEQAAHLLDYGFA 331


>gi|134103018|ref|YP_001108679.1| putative penicillin-binding protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133915641|emb|CAM05754.1| putative penicillin-binding protein [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 430

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 11/245 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                + L D  +G V+A         PAS  K++TA V           ++  +  ++ 
Sbjct: 108 VSAASWILADVTSGEVLAARDSHARHRPASAIKVLTALVAIR-----DLNMSDTLVATQA 162

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
            ++   S      G T T++  +  L+++S ND A A+A  L    +     MN  + +L
Sbjct: 163 DADQEGSRVGLHPGVTYTVEQVVTGLLMQSGNDAAHALAMKL-GGPEVMTARMNELAHHL 221

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----QYMHYFQIKGLEIKGKKYP 201
           G   T      G+   G  ++A D+A++                 +  + G   +  +  
Sbjct: 222 GALDTRAATPSGLDGPGMSSSAYDLALVFRAAMQRPEFARAINTQHTVLPGPPGQPLEVW 281

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSASLL 260
           + N  +  + GA G KTGFT  +    +A+A +  + ++AV+L   ++  R +  +  LL
Sbjct: 282 SDNAVLLNYAGALGGKTGFTDDARHTFIAAAERDGRRIVAVLLRGENQPLRLSSQTMRLL 341

Query: 261 SMGFY 265
             GF 
Sbjct: 342 DYGFT 346


>gi|228903867|ref|ZP_04067982.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
 gi|228855776|gb|EEN00321.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
          Length = 423

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 73/332 (21%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K +GL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKVGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           N+ G+                  +  +ARDM IL+  I T +P+ +   + +        
Sbjct: 163 NSTGLNNADLKGKHPEGTDPTGENSMSARDMGILAKTIITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFSYDGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEHGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPVKKDTKVGSITLE 374


>gi|187734951|ref|YP_001877063.1| Serine-type D-Ala-D-Ala carboxypeptidase [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425003|gb|ACD04282.1| Serine-type D-Ala-D-Ala carboxypeptidase [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 307

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 17/258 (6%)

Query: 17  FPFLSIAETNKLP------YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           FP   +A  +  P         ++D  TG V+  +        AS  KL+TA VV     
Sbjct: 53  FPTRPVAIPSSAPRTPRCASACVMDALTGKVLFSHNGLQHRQVASTQKLVTAMVVMEH-- 110

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   + I  + ++  P+   F+ G   +    L  ++++S ND+A+A+A     +
Sbjct: 111 ---GSLDKKVVIQPSDTKADPTKLGFRAGEVYSRRELLNAMMIRSFNDVALALARDTAGS 167

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
             +F Q MN  ++ +G+  + F N +G+     Y+TA DMA  ++ +  +        + 
Sbjct: 168 VPRFAQLMNAKARQMGMYNSRFANPNGLPA-DQYSTAIDMARCAYYVYRNPELRNIICKR 226

Query: 191 KGLEIKGKK----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           +    +         NTN  +       GMKTG+T A+G  +V+SA    + +I V+LG 
Sbjct: 227 QYAFTRANGRTLLLRNTNKLLTQNPWVTGMKTGYTNAAGRCLVSSAGVNGRHVIVVVLGC 286

Query: 247 LDRNTRNKVSASLLSMGF 264
                    S +L+    
Sbjct: 287 HPSRI-WTESENLIRWAL 303


>gi|197302181|ref|ZP_03167240.1| hypothetical protein RUMLAC_00907 [Ruminococcus lactaris ATCC
           29176]
 gi|197298612|gb|EDY33153.1| hypothetical protein RUMLAC_00907 [Ruminococcus lactaris ATCC
           29176]
          Length = 464

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/343 (18%), Positives = 124/343 (36%), Gaps = 21/343 (6%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           SN                 ++D N+G ++     D P  PAS+TKL+T  V     K   
Sbjct: 53  SNGLTNWPQGPAVYADSAIVMDMNSGAILYGKQIDKPHYPASITKLLTTLVALDHAKLTD 112

Query: 74  AMLTTPITIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  +  +IS  +    +    +  +     +L   L     + +  +A ++ + +    
Sbjct: 113 KVEFSQDSISFLQYGDAHIGMRAGEELTLEDSLYAVLLASANEVSYAVAESVGKQMGGDY 172

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F++ MN  S  LG + +H+ NA+G+    HYTTA DMA++   +            + 
Sbjct: 173 NTFIEAMNEESDALGCTGSHWTNANGLHDEQHYTTAHDMALIGAAVYQKEAFRTIAQSLT 232

Query: 192 GL-----------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                         +  K           +    G KTG+T  +   +V  A  G+  L+
Sbjct: 233 HQIPPTNLVNEVRTVNQKHKMLWPQNANYYEYCKGGKTGYTDQARTTLVTMADNGELQLV 292

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN----YIIKDFYQQNLSNEVPNISEEV 296
           AV+L     +     + ++   GF N +     +      ++ +  +  +  V   + + 
Sbjct: 293 AVVLYDFGSDA-YTDTRAIFDYGFNNFSKVMLKDLEKADGVRSYKDEENAYVVLPPNVKF 351

Query: 297 CTTQKEIINYNTQMKEAK---DKESHFIDFEKITLLKNKITKK 336
              + E+   +  + E       E   +    +TL   K  +K
Sbjct: 352 SDLKAEVKAKDGSVNEGTVTYTYEGQIVGKADVTLDNKKSVEK 394


>gi|30262550|ref|NP_844927.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Ames]
 gi|47527848|ref|YP_019197.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|165869045|ref|ZP_02213705.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|167632709|ref|ZP_02391036.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|167637949|ref|ZP_02396228.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0193]
 gi|170685562|ref|ZP_02876786.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|170704398|ref|ZP_02894864.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|177649431|ref|ZP_02932433.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0174]
 gi|190565326|ref|ZP_03018246.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196036722|ref|ZP_03104114.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|227814631|ref|YP_002814640.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CDC 684]
 gi|228927615|ref|ZP_04090667.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228946196|ref|ZP_04108529.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229122097|ref|ZP_04251313.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|229603255|ref|YP_002866873.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
 gi|254685126|ref|ZP_05148986.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254722535|ref|ZP_05184323.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A1055]
 gi|254737577|ref|ZP_05195280.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254743240|ref|ZP_05200925.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254751892|ref|ZP_05203929.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Vollum]
 gi|254760412|ref|ZP_05212436.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Australia 94]
 gi|30257182|gb|AAP26413.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           Ames]
 gi|47502996|gb|AAT31672.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|164715771|gb|EDR21288.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|167514498|gb|EDR89865.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0193]
 gi|167533007|gb|EDR95643.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|170130199|gb|EDS99060.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|170670922|gb|EDT21661.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|172084505|gb|EDT69563.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0174]
 gi|190563353|gb|EDV17318.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195990686|gb|EDX54662.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|227004352|gb|ACP14095.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           CDC 684]
 gi|228661440|gb|EEL17064.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|228813487|gb|EEM59775.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228832095|gb|EEM77680.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229267663|gb|ACQ49300.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
          Length = 338

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   ++    A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEENSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N   +A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ R+ T
Sbjct: 131 AEHIAGNEDNFTQLMNEKAKQLKLSQPSPFLNATGMNNGTNKLSTTTAIEVGKLATRLVT 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++   +   K     N     +         G DG++T F+  S ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNSNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKRGDTRLISVILDADNENSTFIETKKLLQYGFD 284


>gi|218903688|ref|YP_002451522.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|228915143|ref|ZP_04078740.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228933848|ref|ZP_04096693.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|218538327|gb|ACK90725.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|228825804|gb|EEM71592.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228844572|gb|EEM89626.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 338

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   ++    A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEENSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N   +A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ R+ T
Sbjct: 131 AEHIAGNEDNFTQLMNEKAKQLKLSQPSPFLNATGMNNGTNKLSTTTAIEVGKLATRLVT 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++   +   K     N     +         G DG++T F+  S ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNSNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKRGDTRLISVILDADNENSTFIETKKLLQYGFN 284


>gi|227486588|ref|ZP_03916904.1| serine family D-Ala-D-Ala carboxypeptidase [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227235406|gb|EEI85421.1| serine family D-Ala-D-Ala carboxypeptidase [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 402

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 84/356 (23%), Positives = 152/356 (42%), Gaps = 27/356 (7%)

Query: 1   MR---QFLVIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M+   +   +I  A +  +   L+  +         +  Y + +   G V  E   D P 
Sbjct: 1   MKYKYKLASLIMAAFIFLMPISLAAGQNKIVGLDENVKAYIIANEENGEVYYEKNADEPR 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNAL 108
             ASL+KLMT  V    +      L T +   K A +   +  S+   K+G T T+D  L
Sbjct: 61  AMASLSKLMTFLVTMDAIHSGALKLDTKVKADKEAEKLTSWEYSSLGVKEGETYTVDELL 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG---VVQHGHYT 165
           K LI  S ND A  +A ++  +E  F + MN  +K L L +  + N+ G      + + +
Sbjct: 121 KGLIAVSGNDCAYLLANTVSVSEPAFAREMNEKAKELDLKSQVYYNSSGVQTEDGYQNTS 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCA 223
           +ARD+  LS  I   +P+ + Y  I+ ++  G+     +         G DG+KTG T  
Sbjct: 181 SARDLFKLSQYILKTYPEILDYAAIREIKDPGRDIDKKSTIPLMDEIKGVDGLKTGTTDE 240

Query: 224 SGFNIVASAIQ------GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           +G+ +V +          D   I V++GA  ++TRNKV + L+       + R  ++  +
Sbjct: 241 AGYCLVTTVDMSKLDSNDDFRSIGVVMGADQKDTRNKVMSDLIYYVSKYFSTRVVLDTNV 300

Query: 278 KDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                ++++ +   I     E++    KE  N   +     D ++   + E +  +
Sbjct: 301 PIKSLKDITVKQGYIDLYPKEDIKMIIKEGENPTIKYNIKDDIKAPIKENEDLGEV 356


>gi|225864539|ref|YP_002749917.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB102]
 gi|229184786|ref|ZP_04311979.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|225790611|gb|ACO30828.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 03BB102]
 gi|228598690|gb|EEK56317.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
          Length = 338

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++   +++ +    F         +     L+D N+G V+ +   D     A+L
Sbjct: 4   LKKFTILLLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVFKKNEDISIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E K  L   + IS        S          T+ + L  L +   
Sbjct: 64  SKLMTEYIAMEQLHEGKIQLDELVKISNEVFRAETSPIQVTSKDKTTVRDLLHALFLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGH---YTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L LS      NA G+    +    TTA D+  
Sbjct: 124 NRSALALAEHIAGNEDNFTILMNEKAKQLKLSQPSPFLNATGMNNDTNKQSNTTAIDVGK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++  DFP  ++  ++       K  K  NTN  +          G DG++T F+   
Sbjct: 184 LATQLVKDFPNVLNITKLTSYQFTFKDSKVFNTNKMIYSLNKNINLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL + + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAQRGDTRLISVILDSNEENSTFIETKKLLQYGFD 284


>gi|256848581|ref|ZP_05554022.1| D-alanyl-D-alanine carboxypeptidase dacA [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256714633|gb|EEU29613.1| D-alanyl-D-alanine carboxypeptidase dacA [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 400

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 73/368 (19%), Positives = 142/368 (38%), Gaps = 35/368 (9%)

Query: 1   MRQFLVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++Q LV   + +++          ++ A T        +D  TG V+  +  D     AS
Sbjct: 4   IKQVLVSFIITLVTVCGVCFNRLPIAHAATVDAHAAFAIDAQTGQVLYNHNGDQRLAVAS 63

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNALKLL 111
           ++KL+T  V+ + +   K   +T + I+    K ++    SN   K     T+    +  
Sbjct: 64  MSKLLTVAVIENEISSGKLKWSTKVKITSAEAKLSTASGYSNVPLKASKQYTVKQLTQAA 123

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------- 162
           ++KS +   +A+  +  +  ++FVQ M   +K +GLS     N  G+             
Sbjct: 124 LIKSGDAATIALTRAQGRNTQQFVQQMGTMAKRIGLSNYRLYNGVGLENGDMASFKLPKT 183

Query: 163 -----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL------ 211
                +  TA+D+A ++  +  ++P  +   + + L   GK YPN+N  +          
Sbjct: 184 AKAAENQMTAQDVAKVARYLIQNYPAVLKITKQRTLRWDGKDYPNSNELLPGNAAAPQKV 243

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR- 270
             DG+KTG +  +G  +V++       +I V++ A   N R   +  L    F N     
Sbjct: 244 KVDGLKTGTSDKAGQCLVSTGTYQGHRIITVVMHA---NNRFSQTKVLYEEVFANWQPVR 300

Query: 271 -KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE-AKDKESHFIDFEKITL 328
            K+   +     Q+         +  V   Q + +          KD +      +K T 
Sbjct: 301 GKQRQTVSVSHGQRKNVQVETKHAVTVWQPQHQPVKAQFIADAHVKDGQKIKAPLKKNTR 360

Query: 329 LKNKITKK 336
           +     +K
Sbjct: 361 VGKLQYRK 368


>gi|317133056|ref|YP_004092370.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ethanoligenens
           harbinense YUAN-3]
 gi|315471035|gb|ADU27639.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ethanoligenens
           harbinense YUAN-3]
          Length = 389

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 20/340 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R++   +A  +L       + A       Y L++  TG VIA          AS TK+MT
Sbjct: 3   RKWAACLAAVLLFVTVGPSARAAAVSARAYALVEQTTGRVIAGADMGERLPMASTTKIMT 62

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +     +     L    T+   A     S+   +   ++TL   +  L+++S ND A 
Sbjct: 63  GLLACESGE-----LDKTFTVPPEALTVEGSSMGLQPDESITLRALVYGLLLESGNDAAN 117

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IA  L  + + F   MN  ++ L L+ THF N  G+   GHYTTA D+A L        
Sbjct: 118 SIAMLLGGSVEGFAAQMNAKARALHLNDTHFANPSGLGADGHYTTALDLARLGAY-AMKN 176

Query: 182 PQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           P +      +   +        +   N N  +G++ G  G+KTGFT  SG  +V+ A +G
Sbjct: 177 PDFAQIVGTRRATVSYNGIANARTLINHNRLLGSYDGEIGIKTGFTKKSGRCLVSCARRG 236

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK-----DFYQQNLSNEVP 290
             +L+   L   D     +  A+LL  GF     R  +   ++         ++      
Sbjct: 237 GVTLVLATLNDPDD---WRDHAALLDQGFSELQARPLLAAPVERRVRVTDGARDTVAVRC 293

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
           + +       +E      Q++     E+     +KI  L+
Sbjct: 294 DPAVSAALRAEETGQVAMQVRLPGKVEAPVRAGQKIGELR 333


>gi|187779942|ref|ZP_02996415.1| hypothetical protein CLOSPO_03538 [Clostridium sporogenes ATCC
           15579]
 gi|187773567|gb|EDU37369.1| hypothetical protein CLOSPO_03538 [Clostridium sporogenes ATCC
           15579]
          Length = 424

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 15/339 (4%)

Query: 5   LVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L+I    + SN+F      +            +D  TG +I     D    PAS TK +T
Sbjct: 11  LLIFIFTLTSNVFAAGDSNTEPPIIYGKTAMTIDVETGEIIYAKNIDKRMYPASTTKYLT 70

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A ++     +   +  T    S+       +      G T+  +N +  L++ S ND A 
Sbjct: 71  ALLLAENKGKNDNIPYTATAKSQPPYSMNINLHPINIGETIKAENVMDGLLLFSGNDTAY 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            I ++L    K F   MN   + L L  THF+  +G+    HYTTA D++I+S     + 
Sbjct: 131 MIGDALAGNSKNFENMMNKKIQELNLKNTHFVTPNGLHNPNHYTTAYDLSIISRAALKNP 190

Query: 182 PQY----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             Y         I   +       N+N  +G   G    KTG+T A+G  +V    + D+
Sbjct: 191 WVYQSSNKKESSIVTSKGTKMTVENSNKLLGK-DGCVAGKTGYTDAAGRCLVTLFNRDDR 249

Query: 238 SLIAVILGA---LDRNTRNKVSASLLSMGFYNKTD---RKKINYIIKDFYQQNLSNEVPN 291
            ++ V++G+      +   +    ++   +  K     +K      +      L    P+
Sbjct: 250 KILGVVMGSVYDAKDSFVFEDMKKIIDWSYNIKPSTLYKKDSALKTETVTYNPLKFIGPS 309

Query: 292 ISEEVCTTQKEIIN-YNTQMKEAKDKESHFIDFEKITLL 329
           ++ +V    KE    Y  ++ + +  ++  ID      L
Sbjct: 310 VTVDVPVILKEDATYYKNEVNDKETNKTINIDNTSYAAL 348


>gi|213853083|ref|ZP_03382615.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 222

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 6/207 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16  VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 76  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 135

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDMA+L   + 
Sbjct: 136 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALI 195

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW 205
            D P      + K       + PN N 
Sbjct: 196 HDVPDEYAIHKEKEFTFNNIRQPNRNR 222


>gi|167751174|ref|ZP_02423301.1| hypothetical protein EUBSIR_02160 [Eubacterium siraeum DSM 15702]
 gi|167655889|gb|EDS00019.1| hypothetical protein EUBSIR_02160 [Eubacterium siraeum DSM 15702]
          Length = 466

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 141/386 (36%), Gaps = 52/386 (13%)

Query: 1   MRQFL----VIIAMAMLSNIFPFLSIAET-------------NKLPYYTLLDTNTGHVIA 43
           M++ L     ++  AML       + AE                     +++T+TG V+ 
Sbjct: 1   MKKILRFASALLCGAMLLCSLSVTAFAENDDEVYDFDPNTDKIYSEAVYMVNTDTGDVVF 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM------LTTPITISKNASEYPPSNSTFK 97
           +        PAS TK+MT  +    L E                  ++ +   PSN+  +
Sbjct: 61  KKNESKKMYPASTTKIMTCIIALEHLSEGALSKKVEVPYDCFNDFYEDPNYSDPSNAAIE 120

Query: 98  K-GSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                +T  + L  L++ SA + A  +A ++   +  KF+  MN  +K LG + T+F+NA
Sbjct: 121 PLQDNLTYKDCLYALMLPSACEAANILAYNIGGGSITKFIGMMNEKAKELGCTGTNFVNA 180

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-------- 207
           HG+    +YTTA D+  ++      FP +         E+       + +++        
Sbjct: 181 HGLHNDNNYTTAEDLYKMTKYAYDKFPLFKKITSTYEYEMPKNDANPSGYSIYSTISLLR 240

Query: 208 ----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-------NTRNK-- 254
                 +  A G KTG T  +G  +  SA +   + I V LGA  +       +      
Sbjct: 241 PGSVYEYEYAYGTKTGTTDEAGRCL-VSAAKNQYNYILVTLGAPVKDKNGEYYDDWYSMI 299

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQ-----NLSNEVPNISEEVCTTQKEIINYNTQ 309
            + +L    F N      +N   +    +     + ++ +     +      + +  +  
Sbjct: 300 DALNLYKWAFTNFEMTTVVNKDEQITEVKVEMGESATHVILTPESDYTALMPKSVKESGV 359

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
            K  K  ES     +K  +L     K
Sbjct: 360 QKVFKAYESVQAPVKKGDILGVMDVK 385


>gi|228477822|ref|ZP_04062450.1| D-alanyl-D-alanine carboxypeptidase DacA [Streptococcus salivarius
           SK126]
 gi|228250514|gb|EEK09728.1| D-alanyl-D-alanine carboxypeptidase DacA [Streptococcus salivarius
           SK126]
          Length = 432

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 135/369 (36%), Gaps = 40/369 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ + ++   +L       + A            +   ++  TG ++ E          
Sbjct: 15  MKKLITLMMTFLLCLGSVAPAFAADKKKGYDAAAKHAIAVEATTGKILYEKDATTSTGIG 74

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TKL+TAY+V+  + +      + + IS    E       ++        T+   L   
Sbjct: 75  SITKLLTAYMVYKAVDQGDLKWNSKVEISDYPFELTVSAGVSNIPLDARKYTVKQLLDAT 134

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------ 159
           ++ SAN  ++A+AE +  TE KFV  M    K+ G++    +NA G+             
Sbjct: 135 LISSANSASIALAEEIGGTESKFVDMMKAQLKDWGITDAKIVNASGLNNSYLGDNIYPGS 194

Query: 160 --QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A+D+AI++  +  ++P+ +   +    +     K    N+          G
Sbjct: 195 KSDEENTMSAKDVAIIAQHVVKEYPEILDITKKTEADFDGVNKLKTFNYMLKGQPSYRKG 254

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   S+I VI+ A + +T    R   +  LL+   Y+  
Sbjct: 255 VDGLKTGTTDLAGASFVAHSNESGMSIITVIMNADNTDTDDYARFTATNDLLNYVVYHWE 314

Query: 269 DRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            +                              +    QK   N +  +K   ++      
Sbjct: 315 SKTIAKKGQAIGKSQAHVIDGKSKQVTAVAKSDFNIIQKIDANNSKHIKVTTNQV--QAP 372

Query: 323 FEKITLLKN 331
            +    +  
Sbjct: 373 VKPGDKVGT 381


>gi|262047823|ref|ZP_06020773.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus
           MV-3A-US]
 gi|260571880|gb|EEX28451.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus crispatus
           MV-3A-US]
          Length = 433

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 129/352 (36%), Gaps = 35/352 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
               + +      +     +D+++G ++           AS+TKL+T Y+    +K  K 
Sbjct: 36  TTSSYQADQVKLNVKSAIAIDSDSGQILYAKNATKTLPIASMTKLVTVYLTLQAIKNHKL 95

Query: 75  MLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +     I K A+    SN   K G + T+    +  +++SAN  A+ + +++  +
Sbjct: 96  SWDQKVKPTAPIVKVANNAEYSNVPLKLGHSYTIRQLYQATLIESANGAAMLLGQTIAGS 155

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
           +K F+  M    K  G+       A G+                  +  +A+DMAI+  +
Sbjct: 156 QKAFIDQMRAQVKKWGIEDAKIYTACGLPNGNLGKDAYPGVNKNAENTMSAKDMAIVGQK 215

Query: 177 IKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVG---TFLG---ADGMKTGFTCASGF 226
           + + FP+ +   ++  L         K  N NW +     +      DG+KTG T A+G 
Sbjct: 216 LISAFPEVLETTRLAHLNFKDAGHVTKMANFNWMLKGLSQYDQAYPVDGLKTGTTDAAGA 275

Query: 227 NIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
             + +       LI V++GA         R   +  L++  F              +  +
Sbjct: 276 CFIGTVQHNGARLITVVMGARHRDGTDPARFMQTKKLMNFIFTKYRPVTMTAGSQMNGAK 335

Query: 283 QNLSNEVPNISEEVCTTQKEIIN---YNTQMKEAKDKESHFIDFEKITLLKN 331
                +  N +  +    K  I        +  + +K++     +K   + +
Sbjct: 336 TIKVTDGDNATTNLGLKNKTTIWDPADGKTLVASLNKKTVEAPIKKDQTIGD 387


>gi|257054601|ref|YP_003132433.1| D-alanyl-D-alanine carboxypeptidase [Saccharomonospora viridis DSM
           43017]
 gi|256584473|gb|ACU95606.1| D-alanyl-D-alanine carboxypeptidase [Saccharomonospora viridis DSM
           43017]
          Length = 410

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 14/259 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +          E      + + D +TG+V+A   P   + PASL K      + + +  +
Sbjct: 84  IVRPADSPEPPEDITAAAWLVQDLDTGYVLAAKNPHGRYRPASLIK-----TLLALVVLE 138

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +      +  +K  +    +     +G   T+D  +  L++ S ND+A A+A +L     
Sbjct: 139 ELPPDHVVVATKEDANQECTCVGLVEGGEYTVDQLIHALLMHSGNDVAHALATALGGV-D 197

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
             V+ MN  ++ LG + T      G+   G  T+A DM+++        P Y      K 
Sbjct: 198 AAVEKMNALAEWLGAADTRAATPSGLDGPGMMTSAYDMSLIFRY-AMQQPAYAEAVGTKH 256

Query: 193 LEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
           ++             N N    ++ G  G KTGFT  +    V +A +  + +  V+L A
Sbjct: 257 IDFPGGPGEPDFPVYNDNPLWASYEGFLGGKTGFTDDARHTYVGAAERDGRRIAVVLLQA 316

Query: 247 LDRNTR-NKVSASLLSMGF 264
             +  R  + +  LL  GF
Sbjct: 317 EQQPIRVAEQAQRLLDYGF 335


>gi|254387230|ref|ZP_05002494.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. Mg1]
 gi|194346039|gb|EDX27005.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. Mg1]
          Length = 424

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 104/289 (35%), Gaps = 20/289 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++ E+     + + D  +G V+A +       PAS  K++ A  V   L + +    T
Sbjct: 79  APALPESLTGRSWIVADAGSGEVLAAHNAHWRLPPASTMKMLFADTVLPTLPKDQVHKVT 138

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
              +S        S+    K       + L L +   + + AV +  ++    +K V+ M
Sbjct: 139 EEEMSD---VGQGSSLVGVKEDYEYSVHDLWLGVFLRSGNDAVHVLSAMNGGIEKTVKDM 195

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-- 196
              ++ L    TH ++  G       ++A D+ +++           +   +        
Sbjct: 196 QAHAEELQALDTHVVSPDGYDAPEQVSSAYDLTLIARSGLQKQDFKEYCGTVSAQFPGSQ 255

Query: 197 -------GKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                    +  NTN  +        + G  G+K G T  +G     +A +  ++L+  +
Sbjct: 256 EAGKARDSFEIQNTNRLMTGAGGLAPYKGIAGVKNGNTTMAGSTFTGAAQRDGRTLLVTV 315

Query: 244 LGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           +       N+  + +A LL  GF      K +  ++    +   S+  P
Sbjct: 316 MNPNSGGLNSVYEETADLLDWGFAAAGKVKPVGELVSPKSEDGTSHGSP 364


>gi|328954547|ref|YP_004371881.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454871|gb|AEB10700.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Desulfobacca
           acetoxidans DSM 11109]
          Length = 350

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 69/332 (20%), Positives = 127/332 (38%), Gaps = 17/332 (5%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + ++ + ++             +   Y ++D +TG +++         PAS  K+ TA V
Sbjct: 8   IWVVCLMVVVGGRAAAETDNPVRAIAYCIMDADTGTILSAQNHQMMLPPASTLKVGTALV 67

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                      L   + +S NA++ P S    K G    +++ L  +++ SAND A A+ 
Sbjct: 68  AI-----NTLQLQDKVPVSVNAAQAPASKIYLKPGEIYNVNDMLYAILLASANDAARALG 122

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +E +F + M    + +G   T+F  A G+   G Y+TA D+A +  +   +    
Sbjct: 123 ERVSGSEDRFARFMTKQLREMGAYRTNFETASGLPSEGQYSTAYDLAFIFRKAMQNPTLA 182

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                       GK+  N N  + T   A   KTG+T AS    V     GD+ +I  ++
Sbjct: 183 RIMNTKTFTLQDGKEVYNHNRFLFTTEYAVAGKTGYTRASKHTYVGLFRNGDKRIIVSMM 242

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           G+  +        +L+  GF            +++  ++  +    +         K   
Sbjct: 243 GSQGK---WADLRTLIEKGFAECGAPIAKLPPVEESLRRPGTYARASA--------KSRT 291

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
               + K  K K          T  +  I KK
Sbjct: 292 RKYVKGKTPKRKV-LSAGVVSGTGTQTSIKKK 322


>gi|257440394|ref|ZP_05616149.1| putative D-alanyl-D-alanine carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257197143|gb|EEU95427.1| putative D-alanyl-D-alanine carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 439

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 127/350 (36%), Gaps = 25/350 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKL-----PYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ + ++   +L+ +  F   A            Y ++D +TG V+A+   +   +PAS
Sbjct: 1   MKKHIAMLCAVLLTALAAFAPGAAAAGPALTATEAYCIIDADTGLVLAQQNMNEELHPAS 60

Query: 56  LTKLMTAYVVFS--FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           +TK+MT  +       K     LT       + +    S+   ++G  + L +AL   ++
Sbjct: 61  ITKVMTLGLACEKAQGKWDNVKLTVSHEDVYSLAGTDSSHIALQEGEEVPLTDALYATMM 120

Query: 114 KSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
            SAND A  +AE     + +  V  MN  +K LGL  THF N HG+    HYT+  DMA 
Sbjct: 121 ASANDGANLLAEYFGGGSIEGGVAAMNAQAKELGLEHTHFANPHGISDEDHYTSCYDMAQ 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV------------GTFLGADGMKTGF 220
           +     T       + + +   +                               G K G+
Sbjct: 181 ILRWALTQPGFETLFTRNEMYTMGPTNVQPVTRYFHQQDKMRVGSSRYYIPAILGSKIGY 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI---- 276
           T  + ++ V  A Q    LI V + +  +  +     +LL   F   T   +I       
Sbjct: 241 TNIARYSYVCLAEQNGVRLICVTMQSQIKTDKYNDVRTLLDDAFARYTGYTEIPAQGVTG 300

Query: 277 -IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            ++     +    V      V     + +         +  E + +  + 
Sbjct: 301 ELEVAGGGSTLGTVTVSDPGVKLLLADGLTAADVSVTLELPERYLLGVDP 350


>gi|259046641|ref|ZP_05737042.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella adiacens
           ATCC 49175]
 gi|259036806|gb|EEW38061.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella adiacens
           ATCC 49175]
          Length = 500

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 137/331 (41%), Gaps = 35/331 (10%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L+D  TG ++  ++ D PW+PAS TKLMTAY+V+  +K  K  L T IT ++    
Sbjct: 91  ESAILVDAETGQILYGDHIDKPWDPASTTKLMTAYLVYEAIKAGKITLDTKITATELDRA 150

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  SN+  + G    + + L L++  S+N   V ++ ++ ++ +++++ MN+ +K 
Sbjct: 151 ISTIDDISNNQIRAGIEYPVRDLLYLMMYPSSNVATVMLSHAISQSNEEYIKMMNDKAKE 210

Query: 145 LGLSATHFMNA--------------HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           LG++ + F N                GV    + TTARD+A LS+    ++P+++   + 
Sbjct: 211 LGMTNSKFYNPSGAVVSAFRGLYTVEGVPDEYNQTTARDLATLSYYFLKNYPEFLEITRE 270

Query: 191 KGLEIK-----GKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
             +         + +   N         +   DG KTG +  +  N V +A +  + +I 
Sbjct: 271 PAVTTMEGTVVEETFYTLNQLASGMNQGYFHVDGFKTGSSPNAALNHVITAKEKGRRVIE 330

Query: 242 VILGALDRNT-------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           V++G    +        R +   ++L   F    +   +   + +   Q +  E  +I  
Sbjct: 331 VLMGVGSWSDYNTSVYYRAQFGNAILEKAFTEYHEETVLKAGVHEIDGQEIKVE-KDIKA 389

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                 K            ++         K
Sbjct: 390 ITKGDSKPTYKLVGDEIIVENTFPTLTKAIK 420


>gi|117927602|ref|YP_872153.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidothermus
           cellulolyticus 11B]
 gi|117648065|gb|ABK52167.1| Serine-type D-Ala-D-Ala carboxypeptidase [Acidothermus
           cellulolyticus 11B]
          Length = 465

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 106/283 (37%), Gaps = 12/283 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++++    L          + + D +TG V+A         PAS  K++TA  +      
Sbjct: 100 VVTSTGENLPPLPPTTATSFIVADADTGEVLAAKDAHRQLAPASTLKVLTAITLIP---- 155

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +      + +  +A     +      G T ++ + L  +++ SAND AVA+A++     
Sbjct: 156 -RLDPAAGVVVQPDAVRVDGTKVGVVAGQTYSVRDLLTAMLMMSANDAAVALADANGGL- 213

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW----RIKTDFPQYMHY 187
           ++ +  MN  +  L    T      G+      ++A D+A++               +  
Sbjct: 214 EQTLAEMNAEAAWLNARDTVAKTPDGLDAPNQASSAYDLALMFRAGLAIPAFRTYLSITR 273

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            Q    +    +    +  + T+ G  G K G+T A+  + V +A +   ++I  ++   
Sbjct: 274 MQFPAPKGASYQIQTHDRLLLTYPGMIGGKNGYTVAAQASYVGAARRNGHTIIVAVM--R 331

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           D+         L   GF        I  ++     ++ S E P
Sbjct: 332 DQPNFWDEVKGLFDWGFAVDGTATPIGTLVPPGPLKSPSAEAP 374


>gi|330500999|ref|YP_004377868.1| D-alanyl-D-alanine endopeptidase [Pseudomonas mendocina NK-01]
 gi|328915285|gb|AEB56116.1| D-alanyl-D-alanine endopeptidase [Pseudomonas mendocina NK-01]
          Length = 293

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 11/265 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           L++    ++SN+    +   +        L+D  TG  +  + PD     AS+TKLMTA 
Sbjct: 3   LLLCGSLVVSNLQAAPAQPKQELAAGSALLIDLKTGQELYSSNPDLRLPVASVTKLMTAM 62

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          L   + I+ ++  E     S  + GS +T  + L L ++ S N  A +
Sbjct: 63  VVLDAK----LPLDEVLPITIRDTQEMQGVFSRVRIGSEITRRDMLHLALMSSENRAAAS 118

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A         FV  MN  ++ LG+  +HF+   G+ +    T      ++    +    
Sbjct: 119 LAHHYPGGHAAFVAAMNAKARALGMHNSHFVEPTGLSEQNVATARDLALMVKAANQYPLI 178

Query: 183 QYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
                     +  +   Y     NTN  V       +  KTGFT A+G  +V +    ++
Sbjct: 179 HQFSTDSEATVAFRKPNYTLGFRNTNALVRKADWNINLSKTGFTNAAGRCLVMATTIANR 238

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  V+LGA  + T    +  L   
Sbjct: 239 PVAFVVLGAFGKYTHMADANRLKRW 263


>gi|254776738|ref|ZP_05218254.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 367

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G VIA   P     PAS+ K++ A          
Sbjct: 39  IVAAPNTPPLPGDVSAEAWLVADLDSGAVIAAKDPHGRHRPASIIKVLVAMAAI-----N 93

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  + + +    +    ++G   T++  L  L++ S ND A A+A  L   ++
Sbjct: 94  TLNLNKAVPGTADDAAAEGTKVGVEEGGVFTVNQLLHGLLMHSGNDAAHALAMQLGGMQQ 153

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 154 AL-EKINVLAAKLGGQDTRVATPSGLDAPGMSTSAYDIGLFYRYAWQNPTFADIVATRTF 212

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A    + L+AV+L G 
Sbjct: 213 DFPGHGDHPGYELENDNQLLYKYPGALGGKTGYTDDAGQTFVGAANHDGRRLVAVLLHGT 272

Query: 247 LDRNTRNKVSASLLSMGFY 265
                  + +A LL  GF 
Sbjct: 273 RQPIAPWEQAAHLLDYGFA 291


>gi|118466287|ref|YP_883443.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium avium 104]
 gi|118167574|gb|ABK68471.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium avium 104]
          Length = 419

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G VIA   P     PAS+ K++ A          
Sbjct: 91  IVAAPNTPPLPGDVSAEAWLVADLDSGAVIAAKDPHGRHRPASIIKVLVAMAAI-----N 145

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  + + +    +    ++G   T++  L  L++ S ND A A+A  L   ++
Sbjct: 146 TLNLNKAVPGTADDAAAEGTKVGVEEGGVFTVNQLLHGLLMHSGNDAAHALAMQLGGMQQ 205

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 206 AL-EKINVLAAKLGGQDTRVATPSGLDAPGMSTSAYDIGLFYRYAWQNPTFADIVATRTF 264

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A    + L+AV+L G 
Sbjct: 265 DFPGHGDHPGYELENDNQLLYKYPGALGGKTGYTDDAGQTFVGAANHDGRRLVAVLLHGT 324

Query: 247 LDRNTRNKVSASLLSMGFY 265
                  + +A LL  GF 
Sbjct: 325 RQPIAPWEQAAHLLDYGFA 343


>gi|41409546|ref|NP_962382.1| hypothetical protein MAP3448 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398377|gb|AAS05998.1| hypothetical protein MAP_3448 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 394

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G VIA   P     PAS+ K++ A          
Sbjct: 66  IVAAPNTPPLPGDVSAEAWLVADLDSGAVIAAKDPHGRHRPASIIKVLVAMAAI-----N 120

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  + + +    +    ++G   T++  L  L++ S ND A A+A  L   ++
Sbjct: 121 TLNLNKAVPGTADDAAAEGTKVGVEEGGVFTVNQLLHGLLMHSGNDAAHALAMQLGGMQQ 180

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 181 AL-EKINVLAAKLGGQDTRVATPSGLDAPGMSTSAYDIGLFYRYAWQNPTFADIVATRTF 239

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A    + L+AV+L G 
Sbjct: 240 DFPGHGDHPGYELENDNQLLYKYPGALGGKTGYTDDAGQTFVGAANHDGRRLVAVLLHGT 299

Query: 247 LDRNTRNKVSASLLSMGFY 265
                  + +A LL  GF 
Sbjct: 300 RQPIAPWEQAAHLLDYGFA 318


>gi|225573149|ref|ZP_03781904.1| hypothetical protein RUMHYD_01340 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039504|gb|EEG49750.1| hypothetical protein RUMHYD_01340 [Blautia hydrogenotrophica DSM
           10507]
          Length = 412

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 115/316 (36%), Gaps = 23/316 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   ++D  T  V+ E   +    PAS+TKL+TA VV    +     L   +  S 
Sbjct: 48  KVSSECGLVMDVGTQTVLYEKNGEELHYPASITKLLTALVVMERCE-----LDETVIFSH 102

Query: 85  NASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +A         +N  F+ G  +T+++ L  +I++S+N  A A+AE    + + FV  MN 
Sbjct: 103 DAVYEVESGSGNNQGFEAGDKLTVEDCLYAMILESSNPAANALAEHTSGSLEAFVNEMNQ 162

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ LG   ++F N  G+      TTA DM ++S  +  +                    
Sbjct: 163 KAEELGCENSNFENPSGLNDEAQKTTAYDMGLISSEVFKNDTLKEICSAETYQLPPTLNQ 222

Query: 201 PNTNWAVGTFLGADG------------MKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                        +G             KTG+T  +G  +V  A + D+ L++V++    
Sbjct: 223 TEGYLLHMEHRLVNGEEQKDDRWDLVAGKTGYTTMAGNTLVTYAEEDDKQLVSVVM--QS 280

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             T  + + +LL+ GF N           +   Q          ++    T +       
Sbjct: 281 EQTHYEDTNNLLNYGFDNYERLVVAEREKQAEIQAAAIAAAAAPTDTGEKTSQVTQTAEK 340

Query: 309 QMKEAKDKESHFIDFE 324
            +  A   +       
Sbjct: 341 SLDTALILKFAVAAGV 356


>gi|302874922|ref|YP_003843555.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulovorans 743B]
 gi|307690459|ref|ZP_07632905.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cellulovorans
           743B]
 gi|302577779|gb|ADL51791.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulovorans 743B]
          Length = 349

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 134/339 (39%), Gaps = 14/339 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            + ++ +  +SN         +        +D  +  V+ E         AS TK+MT+ 
Sbjct: 11  LIAVMILISISNNITAYGKVLSIDARAAIAMDVKSKRVLYEKNSVSLIPMASTTKIMTSL 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V  ++       L   ITISK A+    S   +  G  +TL   L  L+++S ND A+AI
Sbjct: 71  VALTY-----GNLDQEITISKKAAAIRGSTVNYMAGEKVTLRELLYGLMLRSGNDAAIAI 125

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +      F+  MN  +  +G + +HF + HG+  + HYTT  D+AI++ +   +   
Sbjct: 126 AEGIAGDVDSFLVLMNEYANLIGATNSHFESPHGLDSNQHYTTTYDLAIITSKAMENRTF 185

Query: 184 YMHYFQ---IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                     KG     + Y N N  +     A G+KTG+T  +G  +V+S       ++
Sbjct: 186 REIVGCRSIEKGASGFTRGYSNINKILFLHGDATGVKTGYTGQAGKCLVSSFNYDGNDIV 245

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN-ISEEVCTT 299
            ++L     N R   +  + +    N   +K  +            ++    + E++   
Sbjct: 246 VIVLNC---NPRWGETLKIYNHVKDNYEYKKLCSKEDDIAIINTKKSKYKLFLEEDMILP 302

Query: 300 QKEIINYNTQMKEAKDKESHF--IDFEKITLLKNKITKK 336
            K   N+   + + K  +         ++      I  K
Sbjct: 303 IKRNANFALNVVKPKYVKKDTGYYGRIEVIEEGKMIFNK 341


>gi|302523506|ref|ZP_07275848.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
 gi|302432401|gb|EFL04217.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
          Length = 315

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 20/263 (7%)

Query: 22  IAETNKLPYYTLLDTNTG----HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            A   K  +  LLD   G     + A    D     AS TK+MTA VV    +  +  +T
Sbjct: 55  AAPAIKAEHAFLLDARDGSQERELWAGAKADESVPMASTTKIMTAIVVLKHPEWLERQIT 114

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK------TE 131
                     E   S +  + G T+T    L  +++ S  D A A+A++           
Sbjct: 115 VKQEYRDYVQEVGASTADLQTGDTLTARQLLHAMLIPSGADAARALADTFGNGDTEEARI 174

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F+  MN  ++ LGL  THF +  G+ Q  +++TARD+A L  R              +
Sbjct: 175 SDFIAQMNAEAQQLGLKGTHFDSVDGISQGNNHSTARDLAKLGQRAMLQPVFAEVVKNTQ 234

Query: 192 GLE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                       +   + NTN  +GT+ GA G+KTG     G+ +V +A + +++L+ VI
Sbjct: 235 YKTEAPAANGHTRYYTWNNTNELLGTYDGALGVKTGSGPEDGYCVVFAAERDNRTLVGVI 294

Query: 244 LGALDRNTRNKVSASLLSMGFYN 266
           LG      R   +  +L  GF +
Sbjct: 295 LGDDTG--RFDDATKVLDWGFAH 315


>gi|163813991|ref|ZP_02205384.1| hypothetical protein COPEUT_00143 [Coprococcus eutactus ATCC 27759]
 gi|158450685|gb|EDP27680.1| hypothetical protein COPEUT_00143 [Coprococcus eutactus ATCC 27759]
          Length = 425

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 129/332 (38%), Gaps = 32/332 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D  TG ++ E   D     AS TK++T  +           L   + +S 
Sbjct: 61  QLYAKNAVLIDGETGDILYEKNADAHRPNASTTKILTCILALEC-----GNLEDTVAVSS 115

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A++ P      ++G + TL++ L  ++++S ND AV IAE +  + + F   MN  ++ 
Sbjct: 116 YAAKQPEVRLGAQEGESYTLEDMLYAMMLESYNDTAVMIAEHIGGSMEVFADMMNRKARE 175

Query: 145 LGLSATHFMNAHGVVQH----GHYTTARDMAILSWRIK---TDFPQYMHYFQIKGLEI-- 195
           +G  +T+F+  +G+       GH T+A D+A +         +   ++   Q        
Sbjct: 176 IGCHSTYFITPNGLDAQDESGGHGTSADDLARIMRYCILVSPERDMFLKITQSSSHTFSE 235

Query: 196 ----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +     N N  +     A   KTGFTC +G+  V +A +   + I  +LG      
Sbjct: 236 KSGSRTFSCVNHNAFLNMSSEALSGKTGFTCDAGYCYVGAANKNGHTYIWSLLGCGWPGN 295

Query: 252 ---RNKVSASLLSMGFYNKTDRKK---------INYIIKDFYQQNL--SNEVPNISEEVC 297
              + K S +LLS    +    +          +NY  K     N+     +  I  E  
Sbjct: 296 KTYKWKDSKTLLSYAGEHAQYTELSAPESPNVTVNYSSKSAKPGNICTKCNLSGIVAEAG 355

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            T+ ++ +       A   ++     E +  L
Sbjct: 356 DTEGKVDDIRYVYNVADSVKAPVYTGEVVGSL 387


>gi|291556702|emb|CBL33819.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum V10Sc8a]
          Length = 466

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 141/386 (36%), Gaps = 52/386 (13%)

Query: 1   MRQFL----VIIAMAMLSNIFPFLSIAET-------------NKLPYYTLLDTNTGHVIA 43
           M++ L     ++  AML       + AE                     +++T+TG V+ 
Sbjct: 1   MKKILRFASALLCGAMLLCSLSVTAFAENDDEVYDFDPNTDKIYSEAVYMVNTDTGDVVF 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM------LTTPITISKNASEYPPSNSTFK 97
           +        PAS TK+MT  +    L E                  ++ +   PSN+  +
Sbjct: 61  KKNESKKMYPASTTKIMTCIIALEHLSEGALSKKVEVPYDCFNDFYEDPNYSDPSNAAIE 120

Query: 98  K-GSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                +T  + L  L++ SA + A  +A ++   +  KF+  MN  +K LG + T+F+NA
Sbjct: 121 PLQDNLTYKDCLYALMLPSACEAANILAYNIGGGSITKFIGMMNEKAKELGCTGTNFVNA 180

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-------- 207
           HG+    +YTTA D+  ++      FP +         E+       + +++        
Sbjct: 181 HGLHNDNNYTTAEDLYKMTKYAYDKFPLFKKITSTYEYEMPKNDANPSGYSIYSTISLLR 240

Query: 208 ----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-------NTRNK-- 254
                 +  A G KTG T  +G  +  SA +   + I V LGA  +       +      
Sbjct: 241 PGSVYEYEYAYGTKTGTTDEAGRCL-VSAAKNQYNYILVTLGAPVKDKNGEYYDDWYSMI 299

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQ-----NLSNEVPNISEEVCTTQKEIINYNTQ 309
            + +L    F N      +N   +    +     + ++ +     +      + +  +  
Sbjct: 300 DALNLYKWAFTNFEMATVVNKDEQITEVKVEMGESATHVILTPESDYTALMPKSVKESGV 359

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
            K  K  ES     +K  +L     K
Sbjct: 360 QKVFKAYESVQAPVKKGDILGVMDVK 385


>gi|228924135|ref|ZP_04087411.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835625|gb|EEM80990.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 423

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 74/332 (22%), Positives = 123/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     +K L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVKELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGVVQHG--------------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM +LS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDLNAENSMSARDMGMLSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW        + G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 282

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 283 ERFTESRELIEYGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 342

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K   + +   +
Sbjct: 343 KIGTELDKSLAEDGHLVAPTKKDAKVGSITLE 374


>gi|281357416|ref|ZP_06243904.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Victivallis
           vadensis ATCC BAA-548]
 gi|281316019|gb|EFB00045.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Victivallis
           vadensis ATCC BAA-548]
          Length = 391

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 9/264 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK-AM 75
            P   +  +       ++D  T +V+ E         AS+ K+MT  V F  L++     
Sbjct: 128 LPASQVVGSAGATSGIMVDLTTRNVLWEKNSTAKVPIASMVKMMTLLVTFEELEKNPAIS 187

Query: 76  LTTPITISKNASEYPPS-NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           L +P+ I+K A   P +         T  L + LK + +KSAND AV +AE +      F
Sbjct: 188 LESPVQITKTALAVPRTGVVWLDPRETFPLSDLLKAVTIKSANDAAVQVAEFIGGDVDSF 247

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQH---GHYTTARDMAILSWRIKT----DFPQYMHY 187
           V  MN  ++ LG++ +HF++  G+         + ARDM +L+ ++              
Sbjct: 248 VNRMNLRAQTLGMTNSHFVSPCGLPDKKKGNSLSCARDMVVLAEQLLEYPDVMRWSTTKQ 307

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             I+  E K             + G DG+KTGF  ASG+ +  S ++  + ++  + G  
Sbjct: 308 DFIREGEKKTMLTTTNKLVNPRWPGVDGLKTGFINASGYCLTFSVLRDGRRIVGCVTGFK 367

Query: 248 DRNTRNKVSASLLSMGFYNKTDRK 271
               R++ S  L+  G+      K
Sbjct: 368 SARDRDRFSRKLIDWGYARAAALK 391


>gi|333022589|ref|ZP_08450653.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
 gi|332742441|gb|EGJ72882.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
          Length = 315

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 20/263 (7%)

Query: 22  IAETNKLPYYTLLDTNTG----HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            A   K  +  LLD   G     + A    D     AS TK+MTA VV    +     +T
Sbjct: 55  AAPAIKAEHAFLLDARDGSQERELWAGAKADESVPMASTTKIMTAIVVLKHPEWLDRQIT 114

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK------TE 131
                     E   S +  + G T+T    L  +++ S  D A A+A++           
Sbjct: 115 VKQEYRDYVQEVGASTADLQTGDTLTARQLLHAMLIPSGADAARALADTFGNGDTEEARI 174

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F+  MN  ++ LGL  THF +  G+ Q  +++TARD+A L  R              +
Sbjct: 175 TDFIAQMNAEAQQLGLKGTHFDSVDGISQGNNHSTARDLAKLGQRAMLQPVFAEVVKNTQ 234

Query: 192 GLE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                       +   + NTN  +GT+ GA G+KTG     G+ +V +A + +++L+ VI
Sbjct: 235 YKTEAPAANGHTRYYTWNNTNELLGTYDGALGVKTGSGPEDGYCVVFAAERDNRTLVGVI 294

Query: 244 LGALDRNTRNKVSASLLSMGFYN 266
           LG      R   +  +L  GF +
Sbjct: 295 LGDDTG--RFDDATKVLDWGFAH 315


>gi|229161459|ref|ZP_04289440.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
 gi|228621996|gb|EEK78841.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
          Length = 338

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D ++G VI +   +     A+L+KLMT Y
Sbjct: 11  LLSFLITALIVLYFYLYVNGPVIQAKSAILIDASSGEVIYKKNEETLIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L + K  L   + IS    +   S          T+ + L  L++   N  A+A+
Sbjct: 71  IVLEQLNDGKIQLDESVKISNEVFQAETSPIQVTSKDKTTVRDLLHALLLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN  +K L    ++ F+N+ GV    +    TTA D+A L+ ++  
Sbjct: 131 AEHISGNEDSFTTLMNEKAKQLQLSQSSPFLNSTGVNNDTNKQPSTTALDVAKLATQLVK 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++   +   K +   N     +         G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNITKLTSYQFSFKDFQVFNTNKMIYSLNKDIKLQGVDGLQTSFSTNGIYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A  G+  LI+VIL A + N+    +  LL  GF 
Sbjct: 251 AKLGNTRLISVILEADEENSTFIETKKLLQYGFD 284


>gi|227511987|ref|ZP_03942036.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus
           buchneri ATCC 11577]
 gi|227084795|gb|EEI20107.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus
           buchneri ATCC 11577]
          Length = 421

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 122/344 (35%), Gaps = 34/344 (9%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +            +D +TG ++ E     P   AS++KLMT Y+V   ++E K  
Sbjct: 27  AATVSTSQPVIYAKSAIAVDADTGQILYEKNAHQPLAIASISKLMTVYIVQKQIQEGKLS 86

Query: 76  LTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               + IS   ++   ++           +  + + +K  ++ SAN  A+A+ + +    
Sbjct: 87  WNDQVKISPAVAKLSTASGLTNVPLKSGKSYKVRDLVKAALIVSANAAAIALGQKVSGNA 146

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRI 177
           + F   M  T++ LG+    F NA G+                  +  +A+D+A+L+ R+
Sbjct: 147 QNFADKMTKTARGLGIKDAKFYNAAGLTNKLTGSLMLKKDSPNAENLMSAKDIALLASRL 206

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  FP      +   +   G  Y   N       +      +G+KTG +  +G     SA
Sbjct: 207 EESFPGLTKITRQTQMNFSGNSYAGHNQLLDDRQIAKGAVVNGLKTGTSDEAGACFAGSA 266

Query: 233 IQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI------NYIIKDFYQ 282
               + ++ V+LGA         R   +A L+ + F+ +   K                 
Sbjct: 267 TYHGRRIVTVVLGARNNSATDPARFIQTAKLMGIVFHKQHPVKLAMHVHINELGTTKVPD 326

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQM-KEAKDKESHFIDFEK 325
              +       +       + I+      K  K  +      +K
Sbjct: 327 GKQTKTKLVTKKTTWVWVPKSISQKQVKGKFVKTPKKLNAPIKK 370


>gi|228990988|ref|ZP_04150951.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pseudomycoides
           DSM 12442]
 gi|228997075|ref|ZP_04156706.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus mycoides
           Rock3-17]
 gi|229004731|ref|ZP_04162467.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus mycoides
           Rock1-4]
 gi|228756524|gb|EEM05833.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus mycoides
           Rock1-4]
 gi|228762700|gb|EEM11616.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus mycoides
           Rock3-17]
 gi|228768768|gb|EEM17368.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pseudomycoides
           DSM 12442]
          Length = 343

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 12/254 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     ++D + G V+ +N  +    PAS++K+MTAY++   + + K      + IS
Sbjct: 87  PVVEAKAAMIIDASNGQVMYKNNEEELLAPASMSKMMTAYILLENIHKGKVHWEDQVKIS 146

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             +++   +    + G  +T+ +    L+++SAN+ AVA+AE + KTE+ F   MN T+K
Sbjct: 147 AKSAQAEGARIPVQTGDVLTVKDLYHALMIQSANNSAVALAEHIAKTEQDFAHLMNQTAK 206

Query: 144 NLGLSA-THFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE----- 194
            L LS  T F+NA G+          T  D+A L++ + TD+P+ +    ++  +     
Sbjct: 207 QLELSEATKFVNASGLQEPDGSETKMTVADVAKLAYHLVTDYPEILDVTHLRQSQLAFKS 266

Query: 195 ---IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  +  N         G DG+KTGFT ++G+    +A QGD+ L+ V++G   +  
Sbjct: 267 TMVTSTNEMLNPANQGLYLEGMDGLKTGFTDSAGYCFTGTAKQGDKRLVTVVMGTKSQMK 326

Query: 252 RNKVSASLLSMGFY 265
           R   +  L+S GF 
Sbjct: 327 RFTETHKLMSYGFE 340


>gi|229030238|ref|ZP_04186295.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228731082|gb|EEL82007.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 338

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++   +++ +    F         +     L+D N+G V+ +   + P   A+L
Sbjct: 4   LKKFTILLLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEEIPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E K  L   + IS        S          T+ + L  L +   
Sbjct: 64  SKLMTEYIAMEQLNEGKIQLDELVKISNEVFRAEKSPIQVTSKDQTTVRDLLHALFLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +  L LS      NA G+    +    TTA D+A 
Sbjct: 124 NRSALALAEHIAGNEGNFTLLMNENATQLKLSQPSPFLNATGMNNDTNKQSTTTAIDVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++       K  K  NTN  +          G DG++T F+   
Sbjct: 184 LATQLVTDFPDVLNITKLTSYQFTFKDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL + + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAHRGDTRLISVILDSSEENSTFIETKKLLQYGFD 284


>gi|146280427|ref|YP_001170580.1| D-alanyl-D-alanine endopeptidase [Pseudomonas stutzeri A1501]
 gi|145568632|gb|ABP77738.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas stutzeri A1501]
          Length = 390

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 12/266 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIA--ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           L+   +A L  I    +    +        L+D NT  V+  + PD     AS+TKLMTA
Sbjct: 88  LLFACLASLPVIHAQAAKPMVQELASGSALLVDLNTNEVLYSSNPDMVVPIASVTKLMTA 147

Query: 63  YVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            VV          L   + ++ ++A E     S  + GS ++    L L ++ S N  A 
Sbjct: 148 MVVLDAK----LPLDQALPVTIRDAKEMQGVYSRVRIGSEISRREMLLLTLMSSENRAAA 203

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           ++A         F+Q MN  ++ LG+S TH++   G+ +    +    + ++    +   
Sbjct: 204 SLAHHYPGGYAAFIQAMNAKARALGMSRTHYVEPTGLSERNVSSANDLVKLIRASRQYPL 263

Query: 182 PQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGD 236
            Q       K +  +   Y     NTN  V          KTGFT A+G  +V S     
Sbjct: 264 IQQFSTTDEKTVAFRKPNYTLGFRNTNALVRKNNWDIQLSKTGFTNAAGHCLVMSTTMKQ 323

Query: 237 QSLIAVILGALDRNTRNKVSASLLSM 262
           + +  V+L A  + T    +  L   
Sbjct: 324 RPVAFVVLDAFGKYTHMADANRLKKW 349


>gi|322386843|ref|ZP_08060467.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus cristatus
           ATCC 51100]
 gi|321269125|gb|EFX52061.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus cristatus
           ATCC 51100]
          Length = 425

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 139/378 (36%), Gaps = 44/378 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  V + +       P L+            +D N+G ++ E     P    ++T ++
Sbjct: 1   MKKLFVFLLLFFGLIAKPVLADDYEIAAKSAIAVDANSGKILYEKEATSPLEVGAITNIL 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           TAY+V+  +   K  L T + IS  A +    P   +   +     + + L   ++ SAN
Sbjct: 61  TAYLVYEAIANGKLSLETEVDISDYAYQLTVNPSIANLPLEARRYKVKDLLNASLLASAN 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------------ 159
              +A+AE +  +E+ FV+ M    K   +S    +NA G                    
Sbjct: 121 SATIALAEKVGGSEENFVKMMKAKLKEWNISDATIVNATGTDIRLLDGSLETTNTEEEAA 180

Query: 160 ---------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                    +  +  +A D+A+++  +  D+P+ +       +   G +  N N  +   
Sbjct: 181 ENSKSKKKQETVNKFSAYDIAVIASHLIDDYPEVLGITSKSHVNFAGIQLENPNLMLEGS 240

Query: 211 L----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILG----ALDRNTRNKVSASLLSM 262
                G  G+KTG +  SG + V    +    LI V+LG      D NTR  V++SL++ 
Sbjct: 241 PSFRTGVKGLKTGGSEQSGVSFVGVTSEKGMRLITVVLGVAQEDNDPNTRFGVTSSLMTY 300

Query: 263 GFYNKTDRKKINYIIKDFYQQN------LSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
              N +    +    +    Q               SE++   ++       ++      
Sbjct: 301 VTQNFSPTVLVKKGERYNNSQVAVRDSQEDKVAAVASEDLVILERIANQAEHKVTFTPSP 360

Query: 317 ESHFIDFEKITLLKNKIT 334
           +      +K +++     
Sbjct: 361 QELQAPLKKGSVVGTLTY 378


>gi|253579997|ref|ZP_04857264.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus sp.
           5_1_39B_FAA]
 gi|251848516|gb|EES76479.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus sp.
           5_1_39BFAA]
          Length = 419

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 12/249 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       L++ +TG +I     +     AS TK+MT  +     K     L   +  S 
Sbjct: 176 SLSSDCALLMNADTGQIIYGKNENVAHANASTTKIMTCILALENCK-----LNEKVKFSP 230

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A+   PS      G    L + L  L++ S ND AVAIAE +  +  KFV+ MN  +  
Sbjct: 231 YAASIEPSKLYANAGEIFYLKDLLYSLMLPSHNDTAVAIAEHVSGSTAKFVKLMNKKAAE 290

Query: 145 LGLSATHFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYM-----HYFQIKGLEIKGK 198
           +G + THF   +G+   + HYTTA D+A ++                +Y        +  
Sbjct: 291 IGCTNTHFATPNGLDAGYNHYTTASDLAKIAQYAIKKPMFRKLVSTGYYSFSNLNTGRSY 350

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVA-SAIQGDQSLIAVILGALDRNTRNKVSA 257
               TN  +G   G  GMKTG+T  +G+  V  S      + I+V+LGA   + R + S 
Sbjct: 351 SIGTTNALLGNVPGVQGMKTGYTNKAGYCFVGLSYSARGNTYISVVLGADSSSARWQDSR 410

Query: 258 SLLSMGFYN 266
           +LL+  + +
Sbjct: 411 TLLTYAYNH 419


>gi|1420858|emb|CAA61521.1| penicillin-binding protein [Streptococcus pyogenes]
          Length = 324

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/315 (20%), Positives = 128/315 (40%), Gaps = 27/315 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+A+++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAVIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRKKI-- 273
           ++  +G + VA++++    +I V+L A     D     K +  LL     N    + I  
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNADQSHEDDLAIFKTTNQLLQYLLINFQKVQLIEN 301

Query: 274 NYIIKDFYQQNLSNE 288
           N  +K  Y  +   +
Sbjct: 302 NKPVKTLYVLDSPEK 316


>gi|229170279|ref|ZP_04297958.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228613202|gb|EEK70348.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
          Length = 338

 Score =  133 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+DTN+G ++ +   + P   A+L+KLMT Y
Sbjct: 11  LLSFLITALIVLYFYLYVNGPIIQAKSAILIDTNSGEIVYKKNEETPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L E K  L   + IS        S          T+ + L  L +   N  A+A+
Sbjct: 71  IALEQLNEGKIQLDELVKISNEVFRAETSPIQVTSKDKTTVRDLLHALFLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN+ +K L LS      NA G+    +    TT+ D+A L+ ++  
Sbjct: 131 AEHIAGNEDNFTLLMNDKAKQLKLSQPSPFLNATGINNDTNKQSTTTSIDVAKLATQLVK 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A D N+    +  LL  GF 
Sbjct: 251 ATRGDTRLISVILDAGDENSTFIETKKLLQYGFD 284


>gi|317508309|ref|ZP_07965989.1| D-alanyl-D-alanine carboxypeptidase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253484|gb|EFV12874.1| D-alanyl-D-alanine carboxypeptidase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 297

 Score =  133 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/285 (20%), Positives = 107/285 (37%), Gaps = 27/285 (9%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA--------------------ETNKLPYYTLLDTNTGHVI 42
           + L+ I+ AM +      +                           P + + D +TG V+
Sbjct: 7   RTLIAISSAMAATASFATADPDDPTLAPQSGVVQPSGSEPVPDGAAPAWLVADLDTGEVL 66

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
           A   P   ++PAS  K + A VV S L   +   +        A++        + G T 
Sbjct: 67  AARNPHSHYHPASTIKTLLAIVVLSELDVGQ---SLTENADDEAADRESIVRFIRPGETH 123

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+   L+ L++ S+N  A  +A +L        + MN  +  LG + T      G+   G
Sbjct: 124 TVRELLEALLMISSNGAANTLARALGGVGPAVAK-MNAEAARLGANDTRAATPSGLEAPG 182

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK--KYPNTNWAVGTFLGADGMKTGF 220
             ++  D+A+       +        Q +         +  N +  +G++ G  G KTGF
Sbjct: 183 VSSSPHDLALFFRAALRNPTFAEIVRQERATVSGSPAIQLVNRDPLLGSYPGMLGGKTGF 242

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           T  + +N V +A +  + L+  ++         + + +L   GF 
Sbjct: 243 TDEAQYNFVGAAARHGRRLVVAVMHNPGSYP-AQQARALFDWGFA 286


>gi|167946344|ref|ZP_02533418.1| Serine-type D-Ala-D-Ala carboxypeptidase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 228

 Score =  133 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 6/228 (2%)

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +I++S ND  VA+AE +  +E+ F + MNN ++ LG+ A+HF+N+ G+    HYTT  D+
Sbjct: 1   MIIQSGNDACVALAEHIAGSEETFAEVMNNHARRLGMHASHFINSTGLPDKDHYTTPEDI 60

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           A ++     +FP Y  ++  K       K  N N  +      DGMKTG T A+G+ +VA
Sbjct: 61  AKVAMATIREFPDYYKWYSEKSFVFNKIKQHNRNKLLWRDNTVDGMKTGHTEAAGYCLVA 120

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           SA +    LI+V++G      R   S +LL+ GF      +  +        +      P
Sbjct: 121 SAQREQMRLISVVMGTKSEKARASASQALLNYGFRFFESHRLYSAGETLNRARIWKGNKP 180

Query: 291 NISEE------VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            I+        V    K+    N Q+             +++  ++ +
Sbjct: 181 QIALGLAHDLHVSIPHKQYKKLNAQLDVIPTITGPVQQGQEVGQVRIE 228


>gi|299143329|ref|ZP_07036409.1| putative D-alanyl-D-alanine carboxypeptidase [Peptoniphilus sp.
           oral taxon 386 str. F0131]
 gi|298517814|gb|EFI41553.1| putative D-alanyl-D-alanine carboxypeptidase [Peptoniphilus sp.
           oral taxon 386 str. F0131]
          Length = 436

 Score =  133 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 73/331 (22%), Positives = 134/331 (40%), Gaps = 26/331 (7%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y L D  +G ++     D     AS +KL++ +VV   +K+        + I   +S  
Sbjct: 75  AYILGDYRSGKILESYNIDEVKAMASTSKLVSIFVVMDKIKDGTIKKNDMVIIDHESSLL 134

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             S+   K+    T+   +K  +V S ND   A+A+ +  +++ FV  MN   + LGL  
Sbjct: 135 TGSSYKLKENDQKTVWQLIKAALVVSGNDAITALAKHISGSKEAFVSLMNKKCQELGLKN 194

Query: 150 THFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PNT 203
            H +N  G+  +     +  T R+M IL+  +   +P+ +    +  +    + Y   NT
Sbjct: 195 AHMVNPTGLTDYMVEDYNKMTTREMFILARELIKAYPELLEITSLTEIAEPDRNYLEYNT 254

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGD-------QSLIAVILGALDRNTRNKVS 256
           N A+G   G DG+KTG+T A+G  ++ +  +           LI VI+G+     R   +
Sbjct: 255 NPALGIIKGVDGLKTGYTNAAGRCLIVTGFRKGDNTHTKDTRLIGVIIGSRTDWQRYVSA 314

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD- 315
             L+  G          N    +   Q         S +V       + ++ + + ++  
Sbjct: 315 TKLIGEGLDKYKYTVIGN--PDEPVTQIEVENAAKKSIDVYEKSNGTVLWDGKSEISRSF 372

Query: 316 ----------KESHFIDFEKITLLKNKITKK 336
                      E  F+   K T+   +I K+
Sbjct: 373 EIKPNLKAPLSEGEFVGVVKYTMNGEEILKQ 403


>gi|54022905|ref|YP_117147.1| putative penicillin-binding protein [Nocardia farcinica IFM 10152]
 gi|54014413|dbj|BAD55783.1| putative penicillin-binding protein [Nocardia farcinica IFM 10152]
          Length = 434

 Score =  133 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 21/262 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +        + + D +TG V+A   P   + PAS  K++ A V           L  
Sbjct: 103 APPLPRDISATAWMVSDLDTGEVLAAKDPHGRYRPASTIKVLLAIVALR-----TLDLDR 157

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T ++  ++   +      G   T    ++ LI+ S ND A AIA +    +K  V  M
Sbjct: 158 VVTGTQADADVDGTRVGIGPGGRYTNRQLMQALIMASGNDAAHAIA-AQLGGDKATVARM 216

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--------------RIKTDFPQY 184
           N  +K+L    T      G+   G  T+A D+++L                         
Sbjct: 217 NEVAKSLSAFDTRAATPSGLDGPGMTTSAYDLSLLFREAMTIPLFAELIRTEQIDFPGYP 276

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            +       +  G    N N  +  + GA G KTGFT  +    VA+A +  + L+  +L
Sbjct: 277 KNPLIPDDTDHPGFPIGNDNQLLYNYAGALGGKTGFTDDARQTFVAAAERDGRRLVVTLL 336

Query: 245 GALDRNTR-NKVSASLLSMGFY 265
            A     R  + +A LL  GF 
Sbjct: 337 KADVLPIRPWEQAARLLDYGFA 358


>gi|291548692|emb|CBL24954.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus torques L2-14]
          Length = 478

 Score =  133 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 125/343 (36%), Gaps = 20/343 (5%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+A  SN                 ++D N+G V+     +    PAS+TKL+T  V    
Sbjct: 58  AIAPDSNSVENWPQGPATYADSAIVMDMNSGAVLYSKQIEKKHYPASITKLLTTLVALDN 117

Query: 69  LKEKKAMLTTPITIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
            +    +  +  +IS  +    +       +      L   L     + +  +A ++ + 
Sbjct: 118 AELTDTVEFSQDSISFLEYGDAHIGMTPGEQISMEDALYAVLLASANEVSYAVAESVGKK 177

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +      F+Q MN+ S+ LG + +H+ NA+G+    HYTTA DMA +   +         
Sbjct: 178 MGGGYDTFIQAMNDESEKLGCTGSHWTNANGLHDEQHYTTAHDMARIGAAVYQKEAFRTI 237

Query: 187 YFQIKG-----------LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
              +                + K           +    G KTG+T  +   +V  A  G
Sbjct: 238 SQSLSHTIPVTNLVNEERTFQQKHKMLWPQNDNYYEYCKGGKTGYTDQARTTLVTMADNG 297

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR----KKINYIIKDFYQQNLSNEVPN 291
           D  L+AV+L     +     + ++    + N +      +K+   +K +  ++    +P 
Sbjct: 298 DMQLVAVVLYDFGNDA-YIDTRAMFDYAYSNFSKISLKDQKLPEGVKSYEDEDAYIVLPK 356

Query: 292 ISE--EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            ++  +V    KE  N +         +   +   K  + K +
Sbjct: 357 SAQFSDVKAEVKEDSNKDGSGTVTFTYKGQEVGSVKAAIEKTE 399


>gi|331089269|ref|ZP_08338171.1| hypothetical protein HMPREF1025_01754 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330405821|gb|EGG85350.1| hypothetical protein HMPREF1025_01754 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 514

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 118/333 (35%), Gaps = 27/333 (8%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++ N+G ++     +    PAS+TKL+TA V          +  +  
Sbjct: 59  PQGPHVYANSAIVMEMNSGAILYGKKINDKHYPASITKLLTALVALENADPDDEVYFSED 118

Query: 81  TIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ++S  +                   L   L     + +  IA ++ + +    + F+Q M
Sbjct: 119 SVSFLEYGDASIGMRPGEILSMNDALYGMLLASANEVSYAIAESVGKKMGGGFETFIQKM 178

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   + LG + +H+ NA+G+    HYTTA DMA++       F ++    Q     I   
Sbjct: 179 NERCEELGCTGSHWTNANGLHDENHYTTAHDMALIGS-AVYQFDKFREVTQTLNYTIPPT 237

Query: 199 KYPNTNWA------------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              N +                ++    G KTG+T  +   +V  A   D  L+AV+L  
Sbjct: 238 NLVNESRTFQQNHKMLWVGAHYSYDYCTGGKTGYTDQAKTTLVTMADNADMQLVAVVL-- 295

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKIN----YIIKDFYQQNLSNEVPNISEEVCTTQKE 302
            D+      + ++    + N +            ++ F  ++    +P    +V + + E
Sbjct: 296 EDQGDVYVDTRAMFDYVYANFSKVFLNEHDKPDGVRKFKTEDAYVVLPKG-IDVSSLEHE 354

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           I   + Q    K    +     K   +     K
Sbjct: 355 ITITDRQNAAGKLTYLY-----KGQNVGTVEVK 382


>gi|119953389|ref|YP_945598.1| D-alanyl-D-alanine carboxypeptidase [Borrelia turicatae 91E135]
 gi|119862160|gb|AAX17928.1| D-alanyl-D-alanine carboxypeptidase [Borrelia turicatae 91E135]
          Length = 312

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 88/311 (28%), Positives = 130/311 (41%), Gaps = 33/311 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+   VI+ + +LS++F  L           T       L+D +T  ++    P   + P
Sbjct: 1   MKIIPVILNILILSSVFGELFSIDLLEIKKVTEDAKSVVLIDYDTKCILYSKNPGLVFPP 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALK 109
           ASLTKL+T Y      ++K   L T + IS  AS Y      S    ++G  +  +  LK
Sbjct: 61  ASLTKLVTIYTALVEARKKNIDLKTTVPISSAASYYNLPLDSSLMFLEEGHKVNFEELLK 120

Query: 110 LLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            LI+ S ND A+AIAE +       FV  MN    NLGL    F++  G     +  TA 
Sbjct: 121 GLIISSGNDAAIAIAEFIVGKNLSDFVDLMNINVLNLGLINMSFVDTSG-YSSDNKITAL 179

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIK--------------GKKYPNTNWAVGTFLGAD 214
           +MA+ +     +F   +    +K                     K  N N  +  +  AD
Sbjct: 180 EMALFARTYIEEFEFILDIHSLKDFIYPRSENLGNTSSLKMLNFKQKNKNVLIFNYPYAD 239

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVSASLLSMGFYNKT 268
           G+KTG+   SG N+VA+A + D  LIAV+LG            R  ++  L   GF N  
Sbjct: 240 GLKTGYIKTSGLNLVATAKKDDIRLIAVVLGVNKGVDNVGERKRALIAQKLFEYGFGNYA 299

Query: 269 DRKKINYIIKD 279
               I  I + 
Sbjct: 300 QFSFIGKIKRK 310


>gi|228952885|ref|ZP_04114953.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228806795|gb|EEM53346.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 307

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L            +        TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNDTDKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ ++  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAAKLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|318059553|ref|ZP_07978276.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actG]
 gi|318080461|ref|ZP_07987793.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actF]
          Length = 315

 Score =  133 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 20/262 (7%)

Query: 23  AETNKLPYYTLLDTNTG----HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           A   K  +  LLD   G     + A    D     AS TK+MTA VV    +  +  +T 
Sbjct: 56  APAIKAEHAFLLDARDGSQERELWAGAKADESVPMASTTKIMTAIVVLKHPEWLERQITV 115

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK------TEK 132
                    E   S +  + G T+T    L  +++ S  D A A+A++            
Sbjct: 116 KQEYRDYVQEVGASTADLQTGDTLTARQLLHAMLIPSGADAARALADTFGNGDTEEARIS 175

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F+  MN  ++ LGL  THF +  G+ Q  +++TARD+A L  R              + 
Sbjct: 176 DFIAQMNAEAQQLGLKGTHFDSVDGISQGNNHSTARDLAKLGQRAMLQPVFAEVVKNTQY 235

Query: 193 LE--------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                      +   + NTN  +GT+ GA G+KTG     G+ +V +A + +++L+ VIL
Sbjct: 236 KTEAPAANGHTRYYTWNNTNELLGTYDGALGVKTGSGPEDGYCVVFAAERDNRTLVGVIL 295

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
           G      R   +  +L  GF +
Sbjct: 296 GDDTG--RFDDATKVLDWGFAH 315


>gi|325265477|ref|ZP_08132200.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
 gi|324029335|gb|EGB90627.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
          Length = 476

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 64/329 (19%), Positives = 120/329 (36%), Gaps = 25/329 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       ++D  +G ++     D    PAS+TKL+T  V          +  T  
Sbjct: 80  PGGPKVYADSAVVMDMESGAILYGKNMDAKHFPASITKLLTTLVALENADLTDKVKFTED 139

Query: 81  TIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE-SLCKTEKKFVQH 137
           +IS  +            +     +L   L     + ++ +A ++ E  L      F+Q 
Sbjct: 140 SISFLQYDDAQIGMKVGEELSLEDSLHAVLLASANEVSHAVAESVGELRLGGNYDTFIQK 199

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY-------MHYFQI 190
           MN+ +K LG + +H++N +G+    HYTTA DMA+++  +                    
Sbjct: 200 MNDRAKELGCTNSHWVNPNGLHDDEHYTTAHDMALIASAVYQQEEFRTIMGKLEYKIGAT 259

Query: 191 KGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              + +     N           +    G KTG+T  +   +V  A  GD  L AV+L  
Sbjct: 260 NLTQEERVFQQNHKMLWPENYYYYEYCTGGKTGYTDQAKTTLVTMADNGDMHLAAVVLYD 319

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKIN----YIIKDFYQQNLSNEVPNISEEVCTTQKE 302
              +     + +++   F N       N      I +F  QN    +P+ S +  +  K 
Sbjct: 320 YGVDA-YTDTRAMMDYVFSNFKKVPVKNLETSEDINNFNTQNPYVVLPD-SVDFSSLDKN 377

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKN 331
           I+     +++ K   ++     K   + +
Sbjct: 378 IVLTENGIRDGKVNYTY-----KGQAVGS 401


>gi|229011816|ref|ZP_04168997.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
 gi|228749447|gb|EEL99291.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
          Length = 338

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+DTN+G ++ +   + P   A+L+KLMT Y
Sbjct: 11  LLSFLITALIVLYFYLYVNGPIIQAKSAILIDTNSGEIVYKKNEETPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L E K  L   + IS        S          T+ + L  L +   N  A+A+
Sbjct: 71  IALEQLNEGKIQLDELVKISNEVFRAETSPIQVTSKDKTTVRDLLHALFLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN+ +K L LS      NA G+    +    TT+ D+A L+ ++  
Sbjct: 131 AEHIAGNEDNFTLLMNDKAKQLKLSQPSPFLNATGINNDTNKQSTTTSIDVAKLATQLVK 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A D N+    +  LL  GF 
Sbjct: 251 ATRGDTRLISVILDAGDENSTFIETKKLLQYGFD 284


>gi|294790789|ref|ZP_06755947.1| serine-type D-Ala-D-Ala carboxypeptidase [Scardovia inopinata
           F0304]
 gi|294458686|gb|EFG27039.1| serine-type D-Ala-D-Ala carboxypeptidase [Scardovia inopinata
           F0304]
          Length = 466

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 70/314 (22%), Positives = 123/314 (39%), Gaps = 33/314 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                 +   +D  TG ++   Y D P   AS+TK++T Y+V+  + + K   +T + IS
Sbjct: 29  PHITAAHAFAMDYATGRILLNQYGDRPAGIASMTKVITLYLVYKAIDQGKISWSTKVPIS 88

Query: 84  KNASEY---PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             +S       + +   K  + T+ + +    VKSAN  A+++AE +  +E +FV  M  
Sbjct: 89  SYSSRISTNWLTTTVPMKKKSYTVRDLVTAAFVKSANSAAISLAEKIAGSEPRFVDMMRK 148

Query: 141 TSKNLGLSATHFMNAHGVVQH--------------GHYTTARDMAILSWRIKTDFPQYMH 186
             +  G++     N+ G+                  +  +ARD+A+  W    D+PQ + 
Sbjct: 149 QVRQWGITDAKLYNSSGLNNSFLDKNIYPGSSKKAENMMSARDIALAVWHFIHDYPQVLS 208

Query: 187 YFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                     G    +T+         + G DG KTG T  +G    A+A++    +I V
Sbjct: 209 MTSKAHATFDGMPLTSTDHMLPGLNSAYPGLDGFKTGTTEIAGACFAATAVRHGMRVITV 268

Query: 243 ILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY-----QQNLSNEVPNIS 293
           I  A     +   R +    LL   F        +                    VP ++
Sbjct: 269 IQHASHADGNEEARFQAMKKLLDYCFTAYGLVVVVRKGKSFKGSSLPLVDGKKKSVPLVA 328

Query: 294 EE---VCTTQKEII 304
           +    VC +QKE +
Sbjct: 329 QSDLTVCLSQKEKV 342


>gi|228921242|ref|ZP_04084570.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838412|gb|EEM83725.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 338

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+    +    TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTILMNKKAKELKLLQPSPFLNSTGINNDTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|218896308|ref|YP_002444719.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|218541762|gb|ACK94156.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
          Length = 428

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 78/338 (23%), Positives = 131/338 (38%), Gaps = 31/338 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +  L                    + P  +        + T +D  TG V+ 
Sbjct: 5   KKILVFITVICLFLLTPMTLRAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDVLY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAYHRAYPASTTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNEKAKQLGARDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
            HYTT  DMA+++   +   +  Q M+  +      +                + G KTG
Sbjct: 180 NHYTTPYDMAMITKGVQNYPEILQAMNTKRTTVTTSRQTVSIFNKSNFFENPYSIGGKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---I 276
           FT  +   +V    +    +I V++ A  R    +    +    F     +  ++     
Sbjct: 240 FTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSWH 298

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            K  Y     N     S E+   + E  N  T  + A 
Sbjct: 299 QKTTYLNKDINSELEKSAELMLKKDEGKNVKTIFRAAS 336


>gi|218231015|ref|YP_002366059.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           B4264]
 gi|218158972|gb|ACK58964.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus B4264]
          Length = 428

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 31/338 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +  L                    + P  +        + T +D  TG V+ 
Sbjct: 5   KKILVFITVICLFLLTPMTLRAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDVLY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAYHRAYPASTTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNEKAKQLGAKDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
            HYTT  DMA+++   +   +  Q M+  +      +                + G KTG
Sbjct: 180 NHYTTPYDMAMITKGVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSNFFENPYSIGGKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---I 276
           FT  +   +V    +    +I+V++ A  R    +    +    F   T +  ++     
Sbjct: 240 FTNEARNTLVLLNEKDGNRIISVVM-ASQRPEIYEDLKQMADYSFGQFTKQMVLDKHNWH 298

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            K  Y     N     S E+   + E  N  T  + A 
Sbjct: 299 QKTTYLNKDVNSELEQSAELMLKKDEGKNVKTIFRAAS 336


>gi|317500835|ref|ZP_07959047.1| hypothetical protein HMPREF1026_00990 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316897715|gb|EFV19774.1| hypothetical protein HMPREF1026_00990 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 503

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 118/333 (35%), Gaps = 27/333 (8%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++ N+G ++     +    PAS+TKL+TA V          +  +  
Sbjct: 48  PQGPHVYANSAIVMEMNSGAILYGKKINDKHYPASITKLLTALVALENADPDDEVYFSED 107

Query: 81  TIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ++S  +                   L   L     + +  IA ++ + +    + F+Q M
Sbjct: 108 SVSFLEYGDASIGMRPGEILSMNDALYGMLLASANEVSYAIAESVGKKMGGGFETFIQKM 167

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   + LG + +H+ NA+G+    HYTTA DMA++       F ++    Q     I   
Sbjct: 168 NERCEELGCTGSHWTNANGLHDENHYTTAHDMALIGS-AVYQFDKFREVTQTLNYTIPPT 226

Query: 199 KYPNTNWA------------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              N +                ++    G KTG+T  +   +V  A   D  L+AV+L  
Sbjct: 227 NLVNESRTFQQNHKMLWVGAHYSYDYCTGGKTGYTDQAKTTLVTMADNADMQLVAVVL-- 284

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKIN----YIIKDFYQQNLSNEVPNISEEVCTTQKE 302
            D+      + ++    + N +            ++ F  ++    +P    +V + + E
Sbjct: 285 EDQGDVYVDTRAMFDYVYANFSKVFLNEHDKPDGVRKFKTEDAYVVLPKG-IDVSSLEHE 343

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           I   + Q    K    +     K   +     K
Sbjct: 344 ITITDRQNAAGKLTYLY-----KGQNVGTVEVK 371


>gi|323694964|ref|ZP_08109114.1| hypothetical protein HMPREF9475_03978 [Clostridium symbiosum
           WAL-14673]
 gi|323501054|gb|EGB16966.1| hypothetical protein HMPREF9475_03978 [Clostridium symbiosum
           WAL-14673]
          Length = 529

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 80/331 (24%), Positives = 134/331 (40%), Gaps = 30/331 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                      + +     ++D N+G VI        + PAS+TK++TA +V        
Sbjct: 23  VLASADWPDNVSIESDAGIIMDANSGAVIYGKNIHATYAPASITKVLTALIVLERC---- 78

Query: 74  AMLTTPITISKNASEYPPSNST---FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             +   +T S+NA     SNS+   +  G T ++ + L  L++KSAN+ A A+AE +  T
Sbjct: 79  -SMDETVTFSQNAVYNVESNSSSAGYDTGDTASVKDCLYALLLKSANEAANALAEHISGT 137

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP-------Q 183
            ++F   MN  +  LG   +HF N  G+    HY +A DMA+++     +          
Sbjct: 138 TEEFAVLMNEKAAELGCQDSHFSNPSGLNDENHYVSAYDMALITKAAFENADFSKIVATT 197

Query: 184 YMHYFQIKGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           Y      K            K    NW         G KTG+T  +   +V  A QGD  
Sbjct: 198 YYELPPNKKNPEGQGISPGNKMIKKNWPDQYRPDVIGGKTGYTSIALNTLVIGAQQGDTK 257

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
            + VIL +         + +LL+ GF N    +  +Y  K F       ++      + T
Sbjct: 258 FVTVILHSSGTQ--YSDTKALLNFGFNNFKAVRIADY-DKTFSTIGDDLKISG----LPT 310

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           ++K+++  +   K          DF + T+ 
Sbjct: 311 SEKQVLTIDPDSKI---ILPVTADFSETTVS 338


>gi|75758555|ref|ZP_00738675.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493989|gb|EAO57085.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 434

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 73/332 (21%), Positives = 125/332 (37%), Gaps = 34/332 (10%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 54  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 113

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K +GL    F+
Sbjct: 114 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKVGLKKYKFV 173

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           N+ G+                  +  +ARDM IL+  I T +P+ +   + +        
Sbjct: 174 NSTGLNNADLKGKHPEGTDPTGENSMSARDMGILAKTIITKYPEMLEDTKQRFRNFPDNH 233

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            K  +  N NW       ++ G DG+KTG +  +G+    +A +GD  LI+VI+     +
Sbjct: 234 PKPIRMENWNWMLPGAAFSYDGTDGLKTGSSDTAGYGFTITAKRGDVRLISVIIKTKSMD 293

Query: 251 TRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            R   S  L+  GF N   +K            +           +E+    K+      
Sbjct: 294 ERFTESRELIEHGFNNFEKQKLKVNKNNTISVVKGKEDQVTVAPEKEITVIAKKGSKEPY 353

Query: 309 QMKEAKDKE-----SHFIDFEKITLLKNKITK 335
           ++    DK            +K T + +   +
Sbjct: 354 KIGTELDKSLAEDGHLVAPXKKDTKVGSITLE 385


>gi|125625313|ref|YP_001033796.1| DacA protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|124494121|emb|CAL99122.1| DacA protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300072127|gb|ADJ61527.1| D-alanyl-D-alanine carboxypeptidase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 434

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 142/382 (37%), Gaps = 50/382 (13%)

Query: 1   MRQFLVIIAMA---------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DHP 50
           M++  +I                +     +   T        +D ++G ++      D  
Sbjct: 1   MKKIAIIFCTLLMSLSVLSSFAVSADTTTTNNFTVAAKSAIAIDASSGKILYAQNADDAS 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDN 106
              AS+TKL+TAY+V+  + E K   TT + IS  A         SN    +    T+ +
Sbjct: 61  TRIASITKLLTAYLVYKNVAENKLTWTTKVPISDYAYELTQNSNASNIPLAQNGQYTVKD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---- 162
            L  L++ SAN  A+A+AE +  +E KFV  M    K+ G++ +H +NA G+        
Sbjct: 121 LLNALLLPSANSAAIALAEKIAGSEPKFVDMMTKQMKDWGITDSHLVNASGLPNDDLNGH 180

Query: 163 ----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAV 207
                     +  +A+ +A LS+ +  DFP+ +   +   +             NTN  +
Sbjct: 181 IYPGSGASATNTMSAKAVATLSYHLIQDFPEVLQITKKTEIPFDTGNEEKMTLTNTNQML 240

Query: 208 GTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR----NTRNKVSASL 259
             F     G DG+KTG T         +  Q    +I V+L A D     +T   ++  L
Sbjct: 241 SGFSTSRTGVDGLKTGSTSFQIDCFAGTTNQNGFRIITVVLEATDPAADNSTPFTLTNQL 300

Query: 260 LSMGFYNKTDRKKINYI------IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           ++  + +      +          +          V  ++ +  T     + Y T     
Sbjct: 301 MNYVYGHWRTTNLVQKNQSLDDFKEIAVTDGKEKSVQLVAPQNVTPV---VPYATDGSAD 357

Query: 314 KDKESHFIDFEKITLLKNKITK 335
                   D +K   ++  ITK
Sbjct: 358 TKPLVIKFDKKKNATVEATITK 379


>gi|291087522|ref|ZP_06571984.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
 gi|291074901|gb|EFE12265.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
          Length = 489

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/324 (21%), Positives = 123/324 (37%), Gaps = 30/324 (9%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                ++D ++G V+      +   PAS+ KL+TA VV          L   +T S +A 
Sbjct: 2   ADIGIVIDADSGAVLFGQGIHNQSPPASIAKLLTALVVVENS-----SLDDMVTFSHDAV 56

Query: 88  EYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                   +    ++G  +++ + L LL+++S+N  A A+AE +  +   FV+ MN    
Sbjct: 57  YNVESGSGNKKNIEEGDVLSVRDCLYLLLLQSSNQAANALAEHVAGSRDAFVEMMNEKVS 116

Query: 144 NLGL-SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE-------I 195
            LG    THF N  G+     + +A DMA+++     D  Q       K  +        
Sbjct: 117 ELGCVDDTHFANPSGLNDDTQHVSAYDMALIAK-AAFDNQQVYEIASTKSYKLPATINNP 175

Query: 196 KGKKYPNTNW--------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            G    N +         +   +  A   KTG+T  +G  +V  A +  + LI+VIL   
Sbjct: 176 NGVTCTNEHRLIITEDETSELYYPAAKAGKTGYTSLAGNTLVTCAEEDGRCLISVILKGQ 235

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
                     +LL  GF    +         +  +     E   ++    +     I   
Sbjct: 236 PSPNYFLDGKNLLQFGFERFQNLSV----PDNETRYVTGEESVAVNGTEYSPSDLEIEAG 291

Query: 308 TQMKEAKDKESHFIDFEKITLLKN 331
           T +   KD        E +T+L +
Sbjct: 292 TVITIPKDASFQDAALELVTVLPD 315


>gi|218132847|ref|ZP_03461651.1| hypothetical protein BACPEC_00708 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991720|gb|EEC57724.1| hypothetical protein BACPEC_00708 [Bacteroides pectinophilus ATCC
           43243]
          Length = 417

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 68/378 (17%), Positives = 130/378 (34%), Gaps = 53/378 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPF-----------LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           +++ L++I  A+LS   PF            +        Y  L+D ++G V+ E     
Sbjct: 4   IKRLLIVIMAALLSFTIPFQYRIYAAATRTPAALSQLYARYAALIDADSGRVLFEKNGYE 63

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS TK+MT  +               +T+S  A+  P      KKG    L++ L 
Sbjct: 64  AAPNASTTKIMTCLLALE-----LGNPDDVVTVSSYAASMPDVQLNIKKGEHYRLNDLLY 118

Query: 110 LLIVKSANDIAVAIAESLCKTE----------------------KKFVQHMNNTSKNLGL 147
            L+++S ND AVAIAE +  +                       + F   MN  +  +G 
Sbjct: 119 SLMLQSHNDSAVAIAEHIASSYLDGGSYHSDAASRSSEESRRLVQIFAAAMNERAAAIGC 178

Query: 148 SATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------ 197
           S+ HF+  +G+        H  +A D+A +      +  +++H  + +            
Sbjct: 179 SSAHFVTPNGLDAEDENGPHSISAVDLARILAVCIQN-EEFIHITRTRNYSFNNLDNTAT 237

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---RNK 254
           +   NTN  +    G    KTGFT  +G+    +     +  ++V+L          + K
Sbjct: 238 RSVHNTNAFLDMMDGVICGKTGFTGNAGYCYTCAYASDGRRFVSVVLACGWPGNKTYKWK 297

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            +  +L     +   R     I               +   +  +   +I     +    
Sbjct: 298 DTRKILEYAKASYYYRDIFVPIDDYRNICVSDGTTEYVETYIPDSLSMLIADTDVVNVTY 357

Query: 315 DKE-SHFIDFEKITLLKN 331
           +   +         ++ +
Sbjct: 358 NLPGTIKAPVNDKDIVGS 375


>gi|163940330|ref|YP_001645214.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163862527|gb|ABY43586.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 338

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+DTN+G ++ +   + P   A+L+KLMT Y
Sbjct: 11  LLSFLITALIVLYFYLYVNGPIIQAKSAILIDTNSGEIVYKKNEETPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L E K  L   + IS        S          T+ + L  L +   N  A+A+
Sbjct: 71  IALEQLNEGKIQLDELVKISNEVFRAETSPIQVTSKDKTTVRDLLHALFLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN+ +K L LS      NA G+    +    TT+ D A L+ ++  
Sbjct: 131 AEHIAGNEDNFTLLMNDKAKQLKLSQPSPFLNATGINNDTNKQSTTTSIDAAKLATQLVK 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A D N+    +  LL  GF 
Sbjct: 251 ATRGDTRLISVILDAGDENSTFIETKKLLQYGFD 284


>gi|282891874|ref|ZP_06300353.1| hypothetical protein pah_c200o019 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498134|gb|EFB40474.1| hypothetical protein pah_c200o019 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 427

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 132/362 (36%), Gaps = 33/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M +    + +++L       S       +     L++  TG ++ E      + PAS+TK
Sbjct: 1   MLKLTYYLIISLLFFSNSLFSNTLDVFVEAEAAILMNAETGKILYEKNIHTSYFPASITK 60

Query: 59  LMTA-------------YVVFSFLKEKKAMLTTP----ITISKNASEYPPSNSTFKKGST 101
           + TA              V                    T+         ++    KG  
Sbjct: 61  IATAAFVLKFFSDKLDVIVTAEQDSIGWVTEEAKRKSNYTLPAYWLVPGGTHMGIMKGEQ 120

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++L++ L  L++ SAND A  IA+ +  T   FV  +N  +K  G   T F N HG+   
Sbjct: 121 LSLEDLLHGLMLVSANDSANVIAQYVGGTVPDFVDQLNAYAKQAGCQHTTFHNPHGLHHP 180

Query: 162 GHYTTARDMAILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYPNTNW----AVGTFLG 212
            H TTA DMA+L+               + Y + K  + +       +         +  
Sbjct: 181 EHKTTAYDMALLAKEALSIPAFCKMFGTVKYTRPKTNKQESSVLVQNHPLLKQGKFYYAK 240

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN-KTDRK 271
           A G KTG+T  +  N+V +A   D++LIAV+L   +R+   K +  L    F   K +R 
Sbjct: 241 ALGAKTGYTNLAAHNLVVAARDKDRTLIAVLLKTKERDQLFKDAIKLFEAAFQQPKVERL 300

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ----MKEAKDKESHFIDFEKIT 327
            +   I+ F Q+      P  +      +    +          E  + E      + I 
Sbjct: 301 LLRQGIQKFTQKPHWASQPLKAYLDEDVKISYFSAEEPQVQCAVEWLNLEPPIQKGQTIG 360

Query: 328 LL 329
            +
Sbjct: 361 QV 362


>gi|229095861|ref|ZP_04226840.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|229114814|ref|ZP_04244228.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228668879|gb|EEL24307.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228687694|gb|EEL41593.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 407

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           +   +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFAATIDAKTGDLLYDKNAHHRAYPASVTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETVNRNTALMILMVLSANDVSYAIAEHIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  D+A+++      +P+ +     K  
Sbjct: 131 FANMMNEKAKQLGATDSHFVTPNGLHDPNHYTTPYDIAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +    +     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSIYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F   T +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMAEYSFGQFTKQTVLDKHSWHQKTTYLNKDIDSELEKSAELVLKKDEGKNVK 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TIFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|153815363|ref|ZP_01968031.1| hypothetical protein RUMTOR_01597 [Ruminococcus torques ATCC 27756]
 gi|145847222|gb|EDK24140.1| hypothetical protein RUMTOR_01597 [Ruminococcus torques ATCC 27756]
          Length = 519

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 118/333 (35%), Gaps = 27/333 (8%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++ N+G ++     +    PAS+TKL+TA V          +  +  
Sbjct: 64  PQGPHVYANSAIVMEMNSGAILYGKKINDKHYPASITKLLTALVALENADPDDEVYFSED 123

Query: 81  TIS--KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ++S  +                   L   L     + +  IA ++ + +    + F+Q M
Sbjct: 124 SVSFLEYGDASIGMRPGEILSMNDALYGMLLASANEVSYAIAESVGKKMGGGFETFIQKM 183

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   + LG + +H+ NA+G+    HYTTA DMA++       F ++    Q     I   
Sbjct: 184 NERCEELGCTGSHWTNANGLHDENHYTTAHDMALIGS-AVYQFDKFREVTQTLNYTIPPT 242

Query: 199 KYPNTNWA------------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              N +                ++    G KTG+T  +   +V  A   D  L+AV+L  
Sbjct: 243 NLVNESRTFQQNHKMLWVGAHYSYDYCTGGKTGYTDQAKTTLVTMADNADMQLVAVVL-- 300

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKIN----YIIKDFYQQNLSNEVPNISEEVCTTQKE 302
            D+      + ++    + N +            ++ F  ++    +P    +V + + E
Sbjct: 301 EDQGDVYVDTRAMFDYVYANFSKVFLNEHDKPDGVRKFKTEDAYVVLPKG-IDVSSLEHE 359

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           I   + Q    K    +     K   +     K
Sbjct: 360 ITITDRQNAAGKLTYLY-----KGQNVGTVEVK 387


>gi|169351202|ref|ZP_02868140.1| hypothetical protein CLOSPI_01981 [Clostridium spiroforme DSM 1552]
 gi|169292264|gb|EDS74397.1| hypothetical protein CLOSPI_01981 [Clostridium spiroforme DSM 1552]
          Length = 415

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 69/353 (19%), Positives = 134/353 (37%), Gaps = 25/353 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFL-----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           + + ++I++    ++   +     S        Y   +D N+G ++     D    PAS+
Sbjct: 4   KIYCLLISLVCTISLITPIRALDNSEEIGLSAQYAVAIDANSGLILYNKNMDERMYPASM 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA V    ++                 E   S++ F+ G T+T  + L   I+ S 
Sbjct: 64  TKVMTAIVALDMIENLDKTTVITQNDIDTVWETGASSANFEVGETVTYRDLLLGAILPSG 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
            D   A+A +LC +++ FV+ MN  +K L L  THF+N  G+    HYTT  DMA++   
Sbjct: 124 ADATRALANNLCGSQEAFVEKMNECAKKLKLKDTHFVNTTGIHDDNHYTTVHDMALIVQY 183

Query: 177 IKTD------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
              +      + +          +   K   N   +        G K+G+T A+   + +
Sbjct: 184 AVANPTFKEIYSKRYATSSNGLHQWVNKSVYNAKRSNINTDSIIGCKSGYTDAAKNCLSS 243

Query: 231 SAIQGDQSLIAV----ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
               GD  +I V    +   +      + +  +++    N + +  +    +    +NL 
Sbjct: 244 LDKVGDNEIIVVVGKAVNNDVKPKAAVQDTLDIVNYVSQNYSMQPILTKGTE---VKNLD 300

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDK-------ESHFIDFEKITLLKNK 332
             V   ++++    +            +D        E      +K T + N 
Sbjct: 301 ISVAKDNQKILIENQNYAMAFLPNGYNQDDLEFKYTFEKLEAPVKKGTKVGNL 353


>gi|319936455|ref|ZP_08010871.1| serine-type D-Ala-D-Ala carboxypeptidase [Coprobacillus sp. 29_1]
 gi|319808570|gb|EFW05122.1| serine-type D-Ala-D-Ala carboxypeptidase [Coprobacillus sp. 29_1]
          Length = 337

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 14/280 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++   +I +  +S        A       Y ++DT    V+      +  + AS++K+M
Sbjct: 1   MKKIFFVICVFFMSV---TPIHAMDFSGKSYIVMDTFNKTVLEAKNEHYVQSVASISKIM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V           L     I +  ++   S      G  + L + L  L+++S ND A
Sbjct: 58  TAIVAIEN-----GNLDDEYEIGEEVNQAWGSGVYIHIGDHINLRDLLHGLLLRSGNDAA 112

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIK 178
             IA+++      FV+ MN  +K++G++ + F NA G+     G+ ++A DMA+L     
Sbjct: 113 NVIAKNIGGDIPHFVEMMNKKAKDIGMNDSVFSNATGLDEEDAGNRSSAYDMALLMSYCS 172

Query: 179 TDFPQYMHYFQIKGLE-IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            +        +        G  + N N  +  +    G KTGFT  +   +V  AI+ D 
Sbjct: 173 QNPIFNDIVMKQTYKREDGGGTWHNKNRLLEEYEYCVGGKTGFTKKARRTLVTRAIKNDV 232

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           SL+ V L   +     +   +     F    +   +   I
Sbjct: 233 SLVIVTLNCGND---FEFHKAKYEECFEKYQNMLVLPKGI 269


>gi|153823300|ref|ZP_01975967.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
 gi|126519164|gb|EAZ76387.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae B33]
          Length = 225

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 14/218 (6%)

Query: 1   MRQFL--------VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ +        + +++ + S  F        A       Y L+D ++G V+AE   D 
Sbjct: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDN 106
             +PASLTK+MT+YV+   +K     L   + ISKNA        S    + G+T+ + +
Sbjct: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             + +I++S ND  VA+AE +  TE  FV  MN  + +LG+  +HF N+HG+     Y+T
Sbjct: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
             D+A+L   +  D P+    +  +     G    N N
Sbjct: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRN 218


>gi|326938999|gb|AEA14895.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 428

 Score =  132 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 137/340 (40%), Gaps = 35/340 (10%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +  L                    + P  +        + T +D  TG V+ 
Sbjct: 5   KKILVFITVICLFLLTPMTLRAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDVMY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAYHRAYPASTTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNEKAKQLGAKDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
            HYTT  DMA+++   +   +  Q M+  +      +                + G KTG
Sbjct: 180 NHYTTPYDMAMITKGVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSNFFENPYSIGGKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           FT  +   +V    +    +I+V++ A  R    +    +    F   T +  ++     
Sbjct: 240 FTNEARNTLVLLNEKDGNRIISVVM-ASQRPEIYEDLKQMADYSFGQFTKQTVLDK---- 294

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
               N   +   ++++V +  ++      +  E K+ ++ 
Sbjct: 295 ---HNWHQKTTYLNKDVSSELEKSAELMLKKDEGKNVKTI 331


>gi|30019428|ref|NP_831059.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29894972|gb|AAP08260.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 439

 Score =  132 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 31/338 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++FLV I +                       + P  +        + T +D  TG V+ 
Sbjct: 16  KKFLVFITVICSFFLTPITLRAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDVLY 75

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 76  DKNAYHRAYPASTTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 130

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+   
Sbjct: 131 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNEKAKQLGAKDSHFVTPNGLHDP 190

Query: 162 GHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
            HYTT  DMA+++   +   +  Q M+  +      +                + G KTG
Sbjct: 191 NHYTTPYDMAMITKGVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSNFFENPYSIGGKTG 250

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---I 276
           FT  +   +V    +    +I+V++ A  R    +    +    F   T +  ++     
Sbjct: 251 FTNEARNTLVLLNEKDGNRIISVVM-ASQRPEIYEDLKQMAEYSFGQFTKQMVLDKHNWH 309

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            K  Y     N     S E+   + E  N  T  + A 
Sbjct: 310 QKTTYLNKDVNSELEQSAELMLKKDEGKNVKTIFRAAS 347


>gi|296503088|ref|YP_003664788.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|296324140|gb|ADH07068.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 338

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+  + +    TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELQLLQPSPFLNSTGINNNTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|294786845|ref|ZP_06752099.1| serine-type D-Ala-D-Ala carboxypeptidase [Parascardovia denticolens
           F0305]
 gi|294485678|gb|EFG33312.1| serine-type D-Ala-D-Ala carboxypeptidase [Parascardovia denticolens
           F0305]
          Length = 430

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/307 (20%), Positives = 118/307 (38%), Gaps = 28/307 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                 +   ++  TG V+ +   D P   AS+TKL+T Y+ +  + + K   +T + +S
Sbjct: 2   PHVAAAHAYAIEYQTGRVLLDQDGDEPAGIASMTKLITLYLTYKAVAQGKLTWSTKVHVS 61

Query: 84  KNASEYPPSNSTFKKGSTMTLDNA---LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             + +   +  T     +         +   ++ SAN  A+++AE +  +E KFV  M  
Sbjct: 62  DYSYQVATNPLTTSADMSRREFTVSDLVNAAMLPSANSAAISLAERIGGSEPKFVDLMRA 121

Query: 141 TSKNLGLSATHFMNAHGVVQH--------------GHYTTARDMAILSWRIKTDFPQYMH 186
             +  G++     NA G+                  +  +A+DMAI++W +  D+P  + 
Sbjct: 122 QVRAWGITDARIYNASGLNNSFLGSNIYPGSSSKAENALSAKDMAIVAWHLIHDYPSILT 181

Query: 187 YFQIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             +       GK    TN         + G DG+KTG T  +G    A+A+     +IAV
Sbjct: 182 ISKKTQASFGGKTISTTNHMLPGEEAAYPGVDGLKTGTTDEAGACFTATALVKGMRVIAV 241

Query: 243 ILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +  A   +     R K   +L    +        ++   +    +  +  V +  E    
Sbjct: 242 VQKADKADADPLARFKAMKTLFDYCYQAYRMVIVVSQGKQ---YKGSTVAVQDGQERSVI 298

Query: 299 TQKEIIN 305
              +   
Sbjct: 299 AVADRDW 305


>gi|229029046|ref|ZP_04185145.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228732326|gb|EEL83209.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 407

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/327 (22%), Positives = 134/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATAIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FAHMMNERAKQLGATDSHFVTPNGLHDPNHYTTPFDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKATYLNKDIDSELEKSAELMLKKDEGKNVR 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TIFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|300362213|ref|ZP_07058390.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus gasseri
           JV-V03]
 gi|300354832|gb|EFJ70703.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus gasseri
           JV-V03]
          Length = 317

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 21/266 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +      +     +D    +VI     +     AS+TKL+TAY+    +KEKK    T +
Sbjct: 52  ADQVNLNVKAAVAIDAKNENVIYAKNANQSLPIASMTKLLTAYLTLKAIKEKKISWDTTV 111

Query: 81  TISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           + ++       +              T+       ++KSAN+ A  +A ++  +E  F+ 
Sbjct: 112 SPTQEIINLSSNPDYAGVPLSLGQKYTVRELYDAALIKSANNAARMLAIAVSGSETNFLN 171

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHG-----------HYTTARDMAILSWRIKTDFPQYM 185
            M   +    L     +   G+ +             +  +A DMAI++ ++ TD+P+ +
Sbjct: 172 QMRQQANKWKLHNVKLVTVDGLPEKNKNFLGMTTTIENKMSANDMAIIARKLVTDYPEVL 231

Query: 186 HYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
              ++   + +     N+N               DG+KTG T  +G     +  + ++ +
Sbjct: 232 STTKVAKSDFRNTLMTNSNKMLSGLSDYDPNYPVDGLKTGTTDGAGACFTCTMDKNNKRV 291

Query: 240 IAVILGALDRNTRNKVSASLLSMGFY 265
           I VILGA + N R   +  LL+  F 
Sbjct: 292 ITVILGAQNDNERFSETKKLLNYSFN 317


>gi|222095010|ref|YP_002529070.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|221239068|gb|ACM11778.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
          Length = 428

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 78/359 (21%), Positives = 138/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I    L                    + P           + T +D  TG ++ 
Sbjct: 5   KKILVFITAICLFFLTPMTLRAETNVGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF--KKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN     + G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIELQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAEHIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S EV   + E  N  T  + A   +     + K       + 
Sbjct: 298 HQKTTYLNKDIDSELEKSAEVMLKKDEGKNVRTIFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|301052915|ref|YP_003791126.1| D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis CI]
 gi|300375084|gb|ADK03988.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 428

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 33/333 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ L  I +  L                    + P           + T +D  TG ++ 
Sbjct: 5   KKILAFITVICLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQVMNTKRTTVTTSRQTVSIFNKSTYFENPYSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             K  Y     +     S E+   + E  N  T
Sbjct: 298 HQKTTYLNKDIDSELEKSAELILKKDEGKNVKT 330


>gi|291521155|emb|CBK79448.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus catus GD/7]
          Length = 438

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 20/258 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D ++G ++     D    PAS+TK++T  ++          L   IT S++
Sbjct: 65  LYSSAACVIDVDSGEILYYKNMDDRHYPASITKVLTGLLLIENA-----NLDDTITFSQD 119

Query: 86  AS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                  Y   N     G  +T+++AL  +++ SAN++    A+ +  +   F   MN  
Sbjct: 120 CWNGLNYYNDMNIGILDGEQLTVNDALHAILMSSANEVCNGAAKFVSGSVSAFCDLMNER 179

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG---- 197
           +K LG + THF+N +G+    HYT+A DMA++S     +          +          
Sbjct: 180 AKALGCTNTHFVNPNGLHDPDHYTSAHDMALISREAIQNPIFREITGCTEYTVASTNLRP 239

Query: 198 ------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  K+    +    +    G KTG+T  +   +V  A +   +L  V++       
Sbjct: 240 EGFPLSHKHQMLMYTKYHYDACIGGKTGYTSEAKNTLVTYAEKDGHTLACVVM-ENSDGH 298

Query: 252 RNKVSASLLSMGFYNKTD 269
               + + +   F +   
Sbjct: 299 IYPDTINAMDYCFDHYDQ 316


>gi|167755756|ref|ZP_02427883.1| hypothetical protein CLORAM_01271 [Clostridium ramosum DSM 1402]
 gi|167704695|gb|EDS19274.1| hypothetical protein CLORAM_01271 [Clostridium ramosum DSM 1402]
          Length = 411

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 132/351 (37%), Gaps = 20/351 (5%)

Query: 2   RQFLVIIA--MAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++ L  +   + +++ + P  ++  +        Y   +D  +G V+     D    PAS
Sbjct: 3   KKILSFLLVGICLIATLTPIRALENSEDIGLTCDYAVAIDAKSGLVLYNKNMDERMYPAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  +    + + K       +      E   S++ F+ G T+T ++ L   I+ S
Sbjct: 63  MTKVMTVILALELMDDMKKTTVITQSDIDTVWETGASSANFEVGETVTYEDLLYGAILPS 122

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             D   A+A +LC +++ FV  MN  ++ L L  THF+N  G+    HYTT  DMA++  
Sbjct: 123 GADATRALANNLCGSQEAFVDKMNELAQKLNLKDTHFVNTTGIHDENHYTTVHDMALIVQ 182

Query: 176 RIKTD------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
               +      + Q          +   K   N   A        G K+G+T  +   + 
Sbjct: 183 YAIQNEDFKNIYAQRYKTSSNGLHQWVNKSMYNAKRAKINVDDILGCKSGYTNEAKSCLS 242

Query: 230 ASAIQGDQSLIAVILGALDRNTRN----KVSASLLSMGFYNKTDRKKINYIIK----DFY 281
           +     D  +I ++  +++ + +       +  +++    + + +  +    K    D  
Sbjct: 243 SLNRVNDNEIITIVGHSVNNDVKTHAAVSDTLDIMNYVGQHYSLQNILTKGAKVRTLDVT 302

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                 ++   +    +           ++     +      +K   + + 
Sbjct: 303 LAKDEQKIAITNLNDVSAFLPNDFNKDDLEYKYSFKKLEAPVKKGEKVGDL 353


>gi|150016752|ref|YP_001309006.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903217|gb|ABR34050.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 284

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 27/292 (9%)

Query: 1   MRQ-------FLVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDH 49
           MR+        + +I +          +  +             LD  +  V+ E     
Sbjct: 1   MRKGTSKCTSLIALILICTQIICIDANAKGKGNNLRVNARSAIALDKESHAVLFEQNAYE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS TK++T+ +           L   + ISK A+    S   +K+   +TL   + 
Sbjct: 61  IVPMASTTKILTSLIAIEQ-----GNLDKKVVISKKAAGIRGSTVGYKENEEITLRELVF 115

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+ KS ND A+AIAE L  + + F + MN+ ++ +G+  +HF + HG+    HY++A D
Sbjct: 116 GLMFKSGNDAAIAIAEELGGSIEGFAEIMNHYARGIGILDSHFESPHGLDSSKHYSSAYD 175

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGF 226
           +AIL+ +              +  + K      Y N N  +    GA+G+KTG+T  +G 
Sbjct: 176 LAILTAKGMDYDLFREVVGSKQISKEKYNFTRDYNNINKILWRIPGANGVKTGYTGQAGK 235

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM-----GFYNKTDRKKI 273
            +V+S     + +I V+L   D   R  V+  + +       F N T ++ +
Sbjct: 236 CLVSSINNNGKDVIIVVLNCPD---RWNVTEKIYNYVLEKVAFGNHTVKELV 284


>gi|312862585|ref|ZP_07722826.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis F0396]
 gi|311101845|gb|EFQ60047.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis F0396]
          Length = 423

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 142/369 (38%), Gaps = 40/369 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ + ++   +L       + A            +   ++ NTG ++ E          
Sbjct: 6   MKKLITLMMTFLLCLGSVAPAFAADKKKGYDAAAKHAIAVEANTGKILYEKDATTSTGIG 65

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+ KL+TAY+V+  + +      + + IS    E       ++        T+   L   
Sbjct: 66  SIIKLLTAYMVYKAVDQGDLKWNSKVDISDYPFELTVSAGVSNIPLDARKYTVKQLLDAT 125

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------ 159
           ++ SAN  ++A+AE +  TE KFV  M    K+ G++    +NA G+             
Sbjct: 126 LIASANSASIALAEEIGGTESKFVDMMKAQLKDWGITDAKIVNASGLNNSYLGDNIYPGS 185

Query: 160 --QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A+D+A+++  +  ++P+ +   +    +     K   +N+          G
Sbjct: 186 KSDEENTMSAKDVAVIAQHVVKEYPEILDITKKTEADFDGVNKLKTSNYMLKGQPSYRKG 245

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   S+I VIL + + +T    R   +  LL+   Y+  
Sbjct: 246 VDGLKTGTTDLAGASFVAHSNESGMSIITVILNSDNTDTDDYARFTATNDLLNYVVYHWE 305

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK------ESHFID 322
            +            ++ ++ +   S++V    K   N   ++    +K            
Sbjct: 306 SKTIAKKGQA--IGKSQASVLDGKSKQVTAVAKSDFNIIQKIDANNNKHIKVTTNQMQAP 363

Query: 323 FEKITLLKN 331
            +    +  
Sbjct: 364 VKAGDKVGT 372


>gi|297196040|ref|ZP_06913438.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297153041|gb|EFH32114.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 367

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 98/283 (34%), Gaps = 21/283 (7%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            E      + + D +TG V+A +       PAS  K + A      L +        +T 
Sbjct: 37  PEDVSALSWLVADADTGDVLAAHDAHRRLPPASTIKTLFALTALPHLAD---APPHKVTE 93

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            + A     S+            + L   +  S+ + AV +   +        + M   +
Sbjct: 94  EELAGVGEGSSLVGIAPGRTYTMDDLWRGVFLSSGNDAVRVLAEMNGGWAATAEQMQAKA 153

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ--------IKGLE 194
           + LG   TH ++  G  + G  ++A D+A+      TD     +            +   
Sbjct: 154 RALGAFDTHVVSPDGYDEPGQVSSAFDLAVFGRAGLTDPQFASYASTVDAPFPGGTRDDG 213

Query: 195 IKGKKY--PNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                Y   NTN        V  + G  G+K G+T  +G  +VA+A +  ++L+  +L  
Sbjct: 214 SPTWTYGIRNTNRLLTGADGVERYPGIIGVKNGYTSNAGNTLVAAARRDGRTLVVTVLNP 273

Query: 247 LDRNTR--NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
                    + + SLL  GF      + +  +     ++    
Sbjct: 274 QSGGGHKVYEEARSLLDWGFSAADRVEPVGSLEPPVVEKAPPA 316


>gi|307243700|ref|ZP_07525840.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           stomatis DSM 17678]
 gi|306492909|gb|EFM64922.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           stomatis DSM 17678]
          Length = 419

 Score =  132 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 79/349 (22%), Positives = 142/349 (40%), Gaps = 27/349 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK-LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +   + + + +L           ++       + DT+T  ++ E   D     ASLTK+M
Sbjct: 10  KVLAIGLCLPLLMQARAGAEQRFSDSYSRSAIVSDTDTNRIVYEKNADQVVPMASLTKMM 69

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  + F  + +KK      +TI  +      +N     G  ++L+  +K +++ SAND A
Sbjct: 70  TLLLTFDAISQKKVDYKDIVTILPSDVNRVGTNIKLTAGEQISLEELMKGMMIVSANDAA 129

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----------GHYTTARDM 170
           +AI+  +  T  KFV+ MN  +K +G+  T F N +G+              + T+ARD+
Sbjct: 130 LAISHHVSTTYSKFVEDMNAKAKEIGMENTVFYNPNGLPTSINVGGKPVGVENKTSARDV 189

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKY---PNTNWAVGTFLGADGMKTGFTCASGFN 227
            +LS  +   +P  +         +  KK     NTN  +      DG+KTGFT A+G+ 
Sbjct: 190 LVLSKYLYDKYPNQLTAITNMSSYVNPKKAINEENTNPLLPLIANVDGLKTGFTGAAGYC 249

Query: 228 IVASAIQGD-------QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---II 277
           +  S              LI V LGA  +  R   S + L     +   +        I 
Sbjct: 250 LAYSMKIDKGNGNDSANRLIGVSLGASSKENRKLASYNTLVYINNHYKTKYLYKKNTTID 309

Query: 278 KDFYQQNLSNEVPNI-SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           +         +   + ++++C  QK+       +K   +    F D ++
Sbjct: 310 RPVINGIPFIKFDLVANKDLCLIQKDTEKLKKTIKY--NSVDIFADNDQ 356


>gi|29832456|ref|NP_827090.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces avermitilis
           MA-4680]
 gi|29609575|dbj|BAC73625.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           avermitilis MA-4680]
          Length = 446

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 99/286 (34%), Gaps = 22/286 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLK 70
             +     + +      + + D  +G V+A         PAS  K++   T    F   +
Sbjct: 69  VQVSGASGLPKKLTARAWLVADHESGEVLAAYNAHRRLAPASTLKMLFADTVLKKFERAE 128

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                    + I   +S       T      + L   L+          AV +   +   
Sbjct: 129 RHTVTADDLVGIPAGSSLVGVQAGTTYTVEQLWLGVFLRSGND------AVHVLSHMNGG 182

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
             + V  M   +++L    TH ++  G    G  ++A D+ + +     D   +  Y   
Sbjct: 183 VAETVAQMQAKAEDLQALDTHVVSPDGFDHKGQLSSAYDLTLFARHGLAD-ADFRDYCAT 241

Query: 191 KGLEI---KGKKYPNTN--------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +  +    + K +   N        W + T+ G  G+K G+T  +G     +A +G ++L
Sbjct: 242 RTADFPAGRKKTFQIQNTDRLLTGAWGMETYDGLIGVKNGYTSHAGNTFTGAATRGGRTL 301

Query: 240 IAVILGALD-RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           +  ++      N   + +A LL  GF +    K +  ++    +  
Sbjct: 302 LVTVMHPKSGGNGVYEETAKLLDWGFAHAASAKPVGTLVDPISEGG 347


>gi|269215526|ref|ZP_06159380.1| serine-type D-Ala-D-Ala carboxypeptidase [Slackia exigua ATCC
           700122]
 gi|269131013|gb|EEZ62088.1| serine-type D-Ala-D-Ala carboxypeptidase [Slackia exigua ATCC
           700122]
          Length = 456

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 122/339 (35%), Gaps = 52/339 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-------------------------AETNKLPYYTLLD 35
           MR+ ++ I  A++  I                               +          + 
Sbjct: 12  MRRCVLSIVAALVLAIGIASPAWADVRPSTDLVLGSTEASRGLSIDNSPDIDAEAALAVT 71

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            + G  +     D  +  AS+TK+MTA V           LT  IT+S  A     S++ 
Sbjct: 72  YD-GRELFARNADSEYKIASITKIMTAIVALDNA-----SLTDTITVSDKAGTTIGSSAQ 125

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAI---------AESLCKTEKKFVQHMNNTSKNLG 146
            + G TM+L  AL+ L+V S ND AVAI          ++    E  FV  MN  +  +G
Sbjct: 126 LRPGDTMSLKTALQGLLVPSGNDAAVAIAETVGARLVTDAQPDPEGAFVDAMNARAAEIG 185

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI------------KGLE 194
            + T F N HG+   G+ + A   A    ++     Q   +  I            K   
Sbjct: 186 CTDTLFTNPHGLDSDGYESDAHSTAHDVAKMTAYAMQNDTFRSIVGGGDVTVTVTQKDGT 245

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
            +     +T+  +G + G  G+KTG    +      +  + + S+  V+LG+     R  
Sbjct: 246 QRAITLISTDELLGVYDGMVGVKTGTGDVALNCFAGACERTEDSIYTVVLGSSTEEGRFD 305

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
            +ASLL   F N  D   IN              V  ++
Sbjct: 306 ATASLLDWAFDNIQDVDLINSPYALDRSGANVPVVAEVA 344


>gi|227524973|ref|ZP_03955022.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227087885|gb|EEI23197.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus hilgardii
           ATCC 8290]
          Length = 421

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 121/344 (35%), Gaps = 34/344 (9%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                +            +D +TG ++ E     P   AS++KLMT Y+V   ++E K  
Sbjct: 27  AATVSTSQPVIYAKSAIAVDADTGQILYEKNAHQPLAIASISKLMTVYIVQKQIQEGKLS 86

Query: 76  LTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               + IS   ++   ++           +  + + LK  ++ SAN  A+A+ + +    
Sbjct: 87  WNDQVKISPAVAKLSTASGLTNVPLKSGKSYKVRDLLKAALIVSANAAAIALGQKVSGNA 146

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRI 177
           + F   M  T++ LG+    F NA G+                  +  +A+D+A+L+ R+
Sbjct: 147 QNFADKMTKTARGLGIKDAKFYNAAGLTNKLTGSLMLKKDSPNAENLMSAKDIALLASRL 206

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASA 232
           +  FP      +   +   G  Y   N       +      +G+KTG +  +G     S 
Sbjct: 207 EESFPGLTKITRQTQMNFSGNSYAGHNQLLDDRQIAKGAVVNGLKTGTSDEAGACFAGST 266

Query: 233 IQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKI------NYIIKDFYQ 282
               + ++ V+LGA         R   +A L+ + F+ +   K                 
Sbjct: 267 TYHGRRIVTVVLGARNNSATDPARFIQTAKLMGIVFHKQHPVKLAMHVHINELGTTKVPD 326

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQM-KEAKDKESHFIDFEK 325
              +       +       + I+      K  K  +      +K
Sbjct: 327 GKQTKTKLVTKKTTWVWVPKSISQKQVKGKFVKTPKKLNAPIKK 370


>gi|183981214|ref|YP_001849505.1| penicillin-binding protein DacC [Mycobacterium marinum M]
 gi|183174540|gb|ACC39650.1| penicillin-binding protein DacC [Mycobacterium marinum M]
          Length = 415

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 99/283 (34%), Gaps = 12/283 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G +IA   P     PAS+ K++ A V        
Sbjct: 89  IIAAPDTPPVPGDVSAEAWLVGDLDSGAIIAARDPHARHRPASIIKVLVAMVSIKE---- 144

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
                  +  + + S    +      G   T++  L  L++ S ND A A+A  L   + 
Sbjct: 145 -LNQNKAVPGTNDDSAAEGTKVGVNAGGMYTVNQLLHGLLMHSGNDAAHALAIQLGGMQT 203

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 204 AL-EKINMLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPIFADIVATRTF 262

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 E  G +  N N  +  + GA G KTG+T  +G   V +A    + L AV+L G 
Sbjct: 263 DFPGHGEHPGYELENDNHLLYNYPGALGGKTGYTDDAGQTFVGAANHNGRRLFAVLLHGT 322

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
                  + +A LL  GF      +  + I  D          
Sbjct: 323 RQPIAPWEQAAHLLDYGFSTAQGTQIGSLIEPDPSLVAPKETP 365


>gi|283779427|ref|YP_003370182.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pirellula
           staleyi DSM 6068]
 gi|283437880|gb|ADB16322.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pirellula
           staleyi DSM 6068]
          Length = 677

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 19/276 (6%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                   + + D  TG +IA    D   + AS TKLMTA VV     E  ++L   +TI
Sbjct: 402 PPVVSCKSWGIADAKTGAIIASYEEDDKLDIASTTKLMTALVVARMAGENASLLDEVVTI 461

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL----------CKTEK 132
           S  A   P S++  ++G  + L   L  L++ S ND +VA+AE +               
Sbjct: 462 SAAADATPGSSAWIREGEKLQLRELLYGLLLPSGNDASVAVAEHIGSKLMLDDRKPAPLD 521

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR--------IKTDFPQY 184
           +F+  MN  +  LG+S T + N HG+ + GH+++ RD   L+             +    
Sbjct: 522 RFIAEMNKVAAELGMSDTSYKNPHGLTEEGHFSSVRDQLKLARTIVGTPMLAPYFEARIR 581

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
               + +    +   + N+N  +  + G  G+KTG T A+G  +V+   QG+  L+ V+L
Sbjct: 582 GARIESEMGYQRNVAWKNSNRLLD-YEGYRGLKTGTTDAAGACLVSHFQQGEVDLVCVVL 640

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           G+   + R   + +LL     ++     ++      
Sbjct: 641 GSTSSDGRYVDTRNLLRWAAKHRPAPAPVDTAPAPV 676


>gi|298249991|ref|ZP_06973795.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297547995|gb|EFH81862.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 321

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 110/262 (41%), Gaps = 14/262 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           +                L+D +TG+V+           AS TK+MTA +        +  
Sbjct: 49  VLTVRGTPPAIGSKIAYLVDDDTGNVLVNVKGRERVPMASTTKIMTAILTIDKADLNQV- 107

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +T        A  +  SN+    G  + L + L  L++ S +D A AIA+S+  ++ +FV
Sbjct: 108 VTIKQDAVDEAKVHNGSNAQLVIGDQIRLKDLLYALMLPSGDDAATAIADSVAGSQTQFV 167

Query: 136 QHMNNTSKNLGLSATHFMNAHGV--------VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
             MN  +K L L  TH++NA G+            HYTT  D+  L+     +       
Sbjct: 168 TMMNAYAKQLKLQNTHYINADGLTYEGKDGKPDPNHYTTGEDLVKLTRYALRNPLFAQIV 227

Query: 188 FQIKGL-----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              K +           +  T+  + T+ G  G+KTGFT  +G+ +V SA      L+  
Sbjct: 228 QLQKYVLPASGVHHAYTWETTDTMLSTYAGLTGVKTGFTGEAGYCLVFSAYSSGHRLVGA 287

Query: 243 ILGALDRNTRNKVSASLLSMGF 264
           +L A D   R K ++SLL   F
Sbjct: 288 VLDAKDEEERFKDASSLLDWAF 309


>gi|327440835|dbj|BAK17200.1| D-alanyl-D-alanine carboxypeptidase [Solibacillus silvestris
           StLB046]
          Length = 324

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/316 (21%), Positives = 124/316 (39%), Gaps = 16/316 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+++ V I +  +         A       Y ++D   G  +           ASLTK+ 
Sbjct: 1   MKKWFVSIVVMFVFLSGSSQIQA---ASNSYVVIDAENGRTLMGVNEHARLPIASLTKIW 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA VV    +     LT  + ISK AS    S+    +  T T+D  L  L+++S ND A
Sbjct: 58  TALVVLENSE-----LTDEVVISKEASLVEGSSIYLLENETYTIDYLLHGLMMQSGNDAA 112

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+AE +  + + FVQ MN  ++   L  T F N  G+    H ++A + A +      +
Sbjct: 113 TALAEHVGGSVEGFVQLMNEKAELYQLHETTFTNPTGLHNEAHLSSAYNTAKMLQIAMMN 172

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                           G+++ N +  +   +GA   KTG+T  +G  +     +  +S +
Sbjct: 173 P--EFRKIASTQNFSDGRQWRNKHRLMHEKIGAIAGKTGYTKVAGRTLATFFEREQKSFV 230

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
            V +   +      +  +L      N   +  +       Y  N      +   ++   +
Sbjct: 231 VVTINEGND---WNIHRNLADFIDNNFEQQTIVKKGK---YNANGLAIELDEPFQMLLHK 284

Query: 301 KEIINYNTQMKEAKDK 316
           KE  N+   +K ++ K
Sbjct: 285 KERPNFEHIVKVSRLK 300


>gi|126434530|ref|YP_001070221.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. JLS]
 gi|126234330|gb|ABN97730.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. JLS]
          Length = 291

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 106/286 (37%), Gaps = 28/286 (9%)

Query: 1   MRQFLVIIAMAMLSN-------------IFPFLSIA-ETNKLPYYTLLDTNTGHVIAENY 46
           M + + + A+ + +              I P  S+         + + D +TG V+A   
Sbjct: 1   MGRLVSLFAIVLAALGVVAAPVAAADIDIQPVGSVPIPAGPAEAWIVADMDTGQVLAGRN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
               + PAS  K + A VV          L T I   +  +    + +    G   T   
Sbjct: 61  DTTRYAPASTIKTLLAQVVLDE-----VPLDTTIAAEEADTRVECNCAGVAPGHVYTARQ 115

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH--Y 164
            L+ L++ S ND A  +A  L   +    + MN  +  LG   T+ +   G+   G   +
Sbjct: 116 LLEALLLVSGNDAANTLARMLGGMDSAVAK-MNAKAAQLGAHGTNVVTPSGLDGPGMPFW 174

Query: 165 TTARDMAILSWRIKTD--FPQYMHYFQIKGLE-IKGKKYPNTNWAVGTFLGADGMKTGFT 221
           +TA D+A++      +  F Q                   N N  +  + GA G KTGFT
Sbjct: 175 STAHDLAVIFRAAMANPVFVQITAMPSTVFPTKAGEAVLVNQNELLHRYPGAIGGKTGFT 234

Query: 222 CASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGF 264
             +    V +A +  + L+ V++         T    +A LL  GF
Sbjct: 235 DIARKTFVGAAQRDGRRLVVVLMHGLVKEGGPTYWDQAAGLLDWGF 280


>gi|108798930|ref|YP_639127.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. MCS]
 gi|119868045|ref|YP_937997.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. KMS]
 gi|108769349|gb|ABG08071.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. MCS]
 gi|119694134|gb|ABL91207.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. KMS]
          Length = 291

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 106/286 (37%), Gaps = 28/286 (9%)

Query: 1   MRQFLVIIAMAMLSN-------------IFPFLSIA-ETNKLPYYTLLDTNTGHVIAENY 46
           M + + + A+ + +              I P  S+         + + D +TG V+A   
Sbjct: 1   MGRLVSLFAIVLAALGVVAAPVAAADIDIQPVGSVPIPAGPAEAWIVADMDTGQVLAGRN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
               + PAS  K + A VV          L T I   +  +    + +    G   T   
Sbjct: 61  DTTRYAPASTIKTLLAQVVLDE-----VPLDTTIAAEEADTRVECNCAGVAPGHVYTARQ 115

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH--Y 164
            L+ L++ S ND A  +A  L   +    + MN  +  LG   T+ +   G+   G   +
Sbjct: 116 LLEALLLVSGNDAANTLARMLGGMDSAVAK-MNAKAAQLGAHGTNVVTPSGLDGPGMPFW 174

Query: 165 TTARDMAILSWRIKTD--FPQYMHYFQIKGLE-IKGKKYPNTNWAVGTFLGADGMKTGFT 221
           +TA D+A++      +  F Q                   N N  +  + GA G KTGFT
Sbjct: 175 STAHDLAVIFRAAMANPVFAQITAMPSTVFPTKAGEAVLVNQNELLHRYPGAIGGKTGFT 234

Query: 222 CASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGF 264
             +    V +A +  + L+ V++         T    +A LL  GF
Sbjct: 235 DIARKTFVGAAQRDGRRLVVVLMHGLVKEGGPTYWDQAAGLLDWGF 280


>gi|323486820|ref|ZP_08092138.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14163]
 gi|323399833|gb|EGA92213.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium symbiosum
           WAL-14163]
          Length = 532

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 79/331 (23%), Positives = 134/331 (40%), Gaps = 30/331 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                      + +     ++D N+G VI        + PAS+TK++TA +V        
Sbjct: 23  VLASADWPDNVSIESDAGIIMDANSGAVIYGKNIHATYAPASITKVLTALIVLERC---- 78

Query: 74  AMLTTPITISKNASEYPPSNST---FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             +   +T S+NA     SNS+   +  G T ++ + L  L++KSAN+ A A+AE +  T
Sbjct: 79  -SMDETVTFSQNAVYNVESNSSSAGYDTGDTASVKDCLYALLLKSANEAANALAEHISGT 137

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP-------Q 183
            ++F   MN  +  LG   +HF N  G+    HY +A DMA+++     +          
Sbjct: 138 TEEFAVLMNEKAAELGCQDSHFSNPSGLNDENHYVSAYDMALITKAAFENADFSKIVATT 197

Query: 184 YMHYFQIKGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           Y      K            K    NW         G KTG+T  +   +V  A QG+  
Sbjct: 198 YYELPPNKKNPEGQGISPGNKMIKKNWPDQYRPDVIGGKTGYTSIALNTLVIGAQQGETK 257

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
            + VIL +         + +LL+ GF N    +  +Y  K F       ++      + T
Sbjct: 258 FVTVILHSSGTQ--YSDTKALLNFGFNNFKAVRIADY-DKTFSTIGDDLKISG----LPT 310

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           ++K+++  +   K          DF + T+ 
Sbjct: 311 SEKQVLTIDPDSKI---ILPVTADFSETTVS 338


>gi|228901108|ref|ZP_04065313.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
 gi|228858534|gb|EEN02989.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
          Length = 338

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+    +    TTA D+A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNDTNKQSTTTAIDVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLIKDFPDVLNITKLTSYQFSFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A   D  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLEDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|228907005|ref|ZP_04070872.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
 gi|228852753|gb|EEM97540.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
          Length = 405

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 14  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 68

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                  S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 69  PEDQFAFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 128

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 129 FANMMNEKAKQLGARDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 188

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 189 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 247

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F     +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 248 IYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDINSELEKSAELMLKKDEGKNVKT 307

Query: 309 QMKEAK 314
             + A 
Sbjct: 308 IFRAAS 313


>gi|218232010|ref|YP_002367234.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           B4264]
 gi|229145140|ref|ZP_04273532.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|218159967|gb|ACK59959.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus B4264]
 gi|228638338|gb|EEK94776.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
          Length = 338

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+  + +    TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNNTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|312862810|ref|ZP_07723050.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis F0396]
 gi|322516764|ref|ZP_08069670.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis ATCC 49124]
 gi|311101670|gb|EFQ59873.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis F0396]
 gi|322124686|gb|EFX96138.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis ATCC 49124]
          Length = 448

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 74/386 (19%), Positives = 139/386 (36%), Gaps = 52/386 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------------KLPYYTLLDTNTGHVIAE 44
           M++ +V I ++    + P LS A+                  +     L+D  TG V+ E
Sbjct: 1   MKKKIVSILLSACLALAPSLSSADELMDITRAAGYTEATEAYRPKSTLLIDGTTGDVLWE 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
              D   +PAS++K MT Y+VF  + + +    T IT +             +N      
Sbjct: 61  ENADEIRDPASMSKAMTLYLVFEAMSKGEISEDTVITATPTDQAIADIYEISNNKIVAGV 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-- 157
                +      +  S     +           K++  MN  SK LG++ T + NA G  
Sbjct: 121 DYTVSELITMTAVPSSNVTTVMLANYLTNNNPDKWLDMMNEKSKELGMTNTKWFNASGAV 180

Query: 158 -------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AI+++     +P+ + Y     + +K        
Sbjct: 181 AVAFKGYYSPQRYDNNQTNQTTARDLAIMTYNFIKKYPKILKYTSKPVVTVKKGTPYEET 240

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDR 249
           +    +          G DG+KTG +    FN + +  +G+Q +IAVI+G+         
Sbjct: 241 FETYNYSIPGAKYGIDGVDGLKTGSSPEGAFNYIDTIKRGNQRMIAVIMGSGDWSDQTGE 300

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             R+    +L+   + + + +K ++   ++       N   ++   V   +   I+    
Sbjct: 301 EIRHTFGNALVEKMYKDFSYKKVLSKGEQEI-DGKKYNVEKDVYATVKKGKDPKISVKDD 359

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
                +         K T +K    K
Sbjct: 360 QIVIDNGLKTVSPNIKATSVKATKVK 385


>gi|229150753|ref|ZP_04278967.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
 gi|228632840|gb|EEK89455.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
          Length = 338

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 121/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L  +K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNNRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+  + +    TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNNTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|322517677|ref|ZP_08070540.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis ATCC 49124]
 gi|322123665|gb|EFX95257.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           vestibularis ATCC 49124]
          Length = 432

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/369 (18%), Positives = 144/369 (39%), Gaps = 40/369 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ + ++   +L       + A            +   ++ NTG ++ E          
Sbjct: 15  MKKLITLMMTFLLCLGSVAPAFAADKKKGYDAAAKHAVAVEANTGKILYEKDATTSAGIG 74

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLL 111
           S+TKL+TAY+V+  + +      + + IS    E       ++        T+   L   
Sbjct: 75  SITKLLTAYMVYKAVDQGDLKWNSKVDISDYPFELTVSAGVSNIPLDARKYTVKQLLDAT 134

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------ 159
           ++ SAN  ++A+AE +  TE KFV  M    K+ G++    +NA G+             
Sbjct: 135 LIASANSASIALAEEIGGTESKFVDMMKAQLKDWGITDAKIVNASGLNNSYLGDNIYPGS 194

Query: 160 --QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLG 212
                +  +A+D+A+++  +  ++P+ +   +    +     K   +N+          G
Sbjct: 195 KSDEENTMSAKDVAVIAQHVVKEYPEILDITKKTEADFDGVNKLKTSNYMLKGQPSYRKG 254

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKT 268
            DG+KTG T  +G + VA + +   S+IAVIL + + +T    R   +  LL+   Y+  
Sbjct: 255 VDGLKTGTTDLAGASFVAHSNESGMSIIAVILNSDNTDTDDYARFTATNDLLNYVVYHWE 314

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK------ESHFID 322
            +            ++ ++ +   S++V    K   N   ++    +K            
Sbjct: 315 SKTIAKKGQA--IGKSQASVLDGKSKQVTAVAKSDFNIIQKIDANNNKHIKVTTNQMQAP 372

Query: 323 FEKITLLKN 331
            +    +  
Sbjct: 373 VKAGDKVGT 381


>gi|268319018|ref|YP_003292674.1| hypothetical protein FI9785_527 [Lactobacillus johnsonii FI9785]
 gi|262397393|emb|CAX66407.1| dacA [Lactobacillus johnsonii FI9785]
          Length = 308

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 121/299 (40%), Gaps = 35/299 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           +++L +I++ + +  F                 +      +     ++   G  I     
Sbjct: 10  KKYLWLISLVIAAICFFVWKNNFNSNRMPSNYHADQVDLNVKAAVAINAKDGSTIYAKNA 69

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           +     AS+TKL+T Y+    +KEKK    T +T ++           ++   + G   T
Sbjct: 70  NQSLPIASMTKLLTVYLTLQAIKEKKISWDTTVTPTQEIVDLGSNPDYASVPLRLGQKYT 129

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-- 161
           +       ++KSAN+ A  +A ++  +E  F+  M+  ++   L+   F+   G+     
Sbjct: 130 VRELYYAALIKSANNAARLLAIAVSGSETNFLNQMSQQARKWKLNNAKFVTVDGLPDKKK 189

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                     +  +A DMAI++ ++ T++P+ ++  ++     +     N N  +     
Sbjct: 190 NFLGMTTTVENKMSANDMAIIARKLITNYPEILNTTKLARAYFQNTLMINNNKMLNGLSY 249

Query: 213 ------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                  DG+KTG T  +G     +  +  + +I VILGA + N R   +  LLS  F 
Sbjct: 250 YDSIFPVDGLKTGTTDGAGSCFTCTVNKNGKRVITVILGAENDNERFVETKKLLSYCFN 308


>gi|228939672|ref|ZP_04102254.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228972534|ref|ZP_04133140.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228787171|gb|EEM35144.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820010|gb|EEM66053.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326940266|gb|AEA16162.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 338

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/281 (24%), Positives = 118/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +  TE  F   MN  +K L L            +        TTA D A 
Sbjct: 124 NRSALALAEHIAGTEDNFTILMNKKAKELQLLQPSPFLNSTGINHDTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|50083539|ref|YP_045049.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter sp. ADP1]
 gi|49529515|emb|CAG67227.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter sp. ADP1]
          Length = 352

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     ASLTKLMTA V      +    + T  
Sbjct: 101 AAQPSVNARAALVMDAQTGEVLYSKNTNTSMPIASLTKLMTAVVTSDARLDMSEEI-TLE 159

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 160 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNA 219

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG+++TH++ + G+    + ++ARD+ IL     + +     +      +      
Sbjct: 220 KARQLGMTSTHYVESSGL-DPHNVSSARDLGILVS-AASQYGLIRQFSTTPSYDFNLGYR 277

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LGA     RN  
Sbjct: 278 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASSTQARNND 337

Query: 256 SASLLSM 262
           + +LL+ 
Sbjct: 338 ATNLLNW 344


>gi|295101852|emb|CBK99397.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           L2-6]
          Length = 319

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 77/283 (27%), Positives = 116/283 (40%), Gaps = 20/283 (7%)

Query: 2   RQFLVIIAMAMLSNIF--PFLSIAETNKL----PYYTLLDTNTGHVIAENYPDHPWNPAS 55
           R   +++  A ++      F   A   +         L D +TG  + E  PD P   AS
Sbjct: 9   RLLALVLTAAFMTTAALSGFAVYAMPIQAAYPQESIYLFDADTGEALVEQNPDLPRCVAS 68

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY---PPSNSTFKKGSTMTLDNALKLLI 112
           LTK+MTA +V     +  A +T P +++                + G T+   + +  ++
Sbjct: 69  LTKMMTALLVLESGTDLSAGITIPASLTPELQSIRANRGHTIGLQAGETVRRIDMMYAML 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A  +A     +   F   MN  +  LG +ATHF   HG+   G+Y+TARDMA 
Sbjct: 129 LPSANDAASVLAVDTSGSLAAFAAQMNVRASQLGCTATHFTCPHGLYDGGNYSTARDMAK 188

Query: 173 LSWRIKTD--FPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLG-----ADGMKTGFTC 222
           ++     D  + Q       K              TN  +    G     A GMKTGFT 
Sbjct: 189 IALACYADPTYRQIADTMSYKLPATNVHPARTVTTTNKLLQPGSGYYRSDAHGMKTGFTT 248

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +G   V  A Q   +   VILG+  +N   + +A L    F 
Sbjct: 249 QAGRCFVTFAQQDGHTYGLVILGSNSQNI-FREAAELFDWAFT 290


>gi|228964330|ref|ZP_04125449.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228795427|gb|EEM42915.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 407

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 74/306 (24%), Positives = 124/306 (40%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAYPASTTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNEKAKQLGARDSHFVTPNGLHDPNHYTTPYDMAMITKGVQNYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F     +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 250 IYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDINSELEKSAELMLKKDEGKNVKT 309

Query: 309 QMKEAK 314
             + A 
Sbjct: 310 IFRAAS 315


>gi|217958851|ref|YP_002337399.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|217065525|gb|ACJ79775.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
          Length = 428

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +  L                    + P           + T +D  TG V+ 
Sbjct: 5   KKILVFITVICLFFLTPMTLRAETNVGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDVLY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +    +     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSIYFENPFSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S EV   + E  N  T  + A   +     + K       + 
Sbjct: 298 HQKTTYLNKDIDSELEKSAEVMLKKDEGKNVRTIFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|145512197|ref|XP_001442015.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409287|emb|CAK74618.1| unnamed protein product [Paramecium tetraurelia]
          Length = 302

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 19/265 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA-MLTTP 79
           S+A       + ++D+N+G V+     +     AS+TK+MT YVV S  K        T 
Sbjct: 36  SLAPRLTAKSWIVVDSNSGDVLYAYNENQRREIASITKIMTFYVVLSMCKTMNVQTNNTY 95

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK------- 132
             +S  AS    + +   KG  +++D+    L++ S ND A+  AE+             
Sbjct: 96  AEVSLQASLVGGTTANLLKGDILSIDDLFYGLMLPSGNDAAMTFAENFGIYAMYQNKIKG 155

Query: 133 -----KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-- 185
                 F+Q MNN ++ L ++ T + N HG+    + ++A D+A L  ++  D       
Sbjct: 156 NNPIIYFIQEMNNKARELRMTQTTYANPHGLNNKNNLSSAYDVAKLCNQLLKDDFFKKVV 215

Query: 186 ----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               H+  I+  E   +     N     + G  G+KTG T  +G  + +     ++S   
Sbjct: 216 NTKIHFCTIQDEEGFTRDVMWENTNKLLYQGFRGIKTGNTSVAGPCLASYYQSNNRSFTI 275

Query: 242 VILGALDRNTRNKVSASLLSMGFYN 266
           VILG  ++  R   +  L+      
Sbjct: 276 VILGCRNQEDRWSETMQLVQWCLSQ 300


>gi|218897511|ref|YP_002445922.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|218543059|gb|ACK95453.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
          Length = 338

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L            +        TTA D+A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGVNNDTNKQSTTTAIDVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLIKDFPDVLNITKLTSYQFSFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A   D  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLEDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|228899954|ref|ZP_04064194.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
 gi|228859685|gb|EEN04105.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
          Length = 407

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 74/306 (24%), Positives = 124/306 (40%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAYPASTTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNEKAKQLGARDSHFVTPNGLHDPNHYTTPYDMAMITKGVQNYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F     +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 250 IYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDINSELEKSAELMLKKDEGKNVKT 309

Query: 309 QMKEAK 314
             + A 
Sbjct: 310 IFRAAS 315


>gi|229074634|ref|ZP_04207657.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
 gi|228708516|gb|EEL60666.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
          Length = 407

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           +   +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFAATIDAKTGDLLYDKNAHHRAYPASVTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETVNRNTALMILMVLSANDVSYAIAEHIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  D+A+++      +P+ +     K  
Sbjct: 131 FANMMNEKAKQLGATDSHFVTPNGLHDPNHYTTPYDIAMITRD-VQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +    +     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSIYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F   T +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMAEYSFGQFTKQMVLDKHSWHQKTTYLNKDIDSELEKSAELVLKKDEGKNVK 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TIFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|229190640|ref|ZP_04317636.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
 gi|228592773|gb|EEK50596.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
          Length = 338

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+  + +    TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTILMNKKAKELKLLQPSPFLNSTGINNNTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|206971597|ref|ZP_03232547.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|229070033|ref|ZP_04203307.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|229079727|ref|ZP_04212260.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|206733582|gb|EDZ50754.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|228703567|gb|EEL56020.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228713088|gb|EEL64989.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
          Length = 338

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L            +        TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNDTDKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ ++  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAAKLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|329935730|ref|ZP_08285535.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           griseoaurantiacus M045]
 gi|329304821|gb|EGG48694.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           griseoaurantiacus M045]
          Length = 281

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 21/277 (7%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A   L+          +       ++++ TG  +     D   +  S TK+MTA VV 
Sbjct: 7   VLATGALTAAPAQAVTKPSITAKGGFVMNSGTGKSLYTKKADTRLSTGSTTKIMTAKVVL 66

Query: 67  SFLKEKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           S        L + +TI    S        S++    G  +T+   L  L++ S  D A A
Sbjct: 67  SQS---NLNLNSKVTIQKAYSDYIVRNNASSAHLIVGDKVTVRQLLYGLMLPSGCDAAYA 123

Query: 123 IAESL------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +A+            K F+  MN T+++LGL+ THF +  G+    +Y+T RD+  L+  
Sbjct: 124 LADKFGSGSSRSARVKSFLSKMNKTARDLGLTNTHFDSFDGIGNGSNYSTPRDLTKLARN 183

Query: 177 IKTDFPQYM--------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
              +                  K    +   + NTN  +  + G  G+KTG    + + +
Sbjct: 184 ALKNSTFRTVVKTKSTKQKVTTKSGGYRYMNWSNTNPLLSGYSGTIGVKTGSGPEAKYCL 243

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           V +A +  ++++  +L +     R   +  LL+ GF 
Sbjct: 244 VFAATRNGKTVVGTVLASSSVANRTSDAKKLLTYGFA 280


>gi|160941724|ref|ZP_02089051.1| hypothetical protein CLOBOL_06620 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435221|gb|EDP12988.1| hypothetical protein CLOBOL_06620 [Clostridium bolteae ATCC
           BAA-613]
          Length = 381

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 105/248 (42%), Gaps = 25/248 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEYP 90
           +D  TG V+     D  + PAS+TKLMTA +V          L   +T S       E  
Sbjct: 1   MDAATGTVLFSKNGDKQFYPASITKLMTALLVAENC-----SLDDKVTFSATATTNLEAG 55

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
             +     G  MT+   L  L++KSAN++  A+AE +  +  KF + MN  +  LG + T
Sbjct: 56  AVSINMTAGDVMTVRQCLYALLLKSANEVGNALAEHVAGSNAKFAEMMNAKAAALGCTNT 115

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------------- 197
           HF N HG+    HYTT  DMA+++                +   +               
Sbjct: 116 HFTNPHGLNDSNHYTTPHDMALIAR-AAFQNDVVKTVASTRTYTLPATIKNSSGLTVTIG 174

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            K  N N     + G  G KTG+T  +G  +V +  +    LIAVI+    ++T    + 
Sbjct: 175 HKMLNPN-DARYYPGVIGGKTGYTSKAGNTLVTAVEKDGVRLIAVIM--KSKSTHYTDTK 231

Query: 258 SLLSMGFY 265
           +L   G+ 
Sbjct: 232 ALFDYGYE 239


>gi|312171829|emb|CBX80086.1| penicillin-binding protein 7 [Erwinia amylovora ATCC BAA-2158]
          Length = 316

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 105/281 (37%), Gaps = 24/281 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           +R FL+ +AM          + A                     ++D N+  VI +++PD
Sbjct: 5   IRLFLLSLAMLFSIPFLMNQAAARAHQPEVSGAVQPDIASGSAMIVDLNSNKVIYQSHPD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNA 107
                AS+TKLMT  V           L   + +   +  +     S  +  S ++  N 
Sbjct: 65  RVRPIASITKLMTVMVTLDA----HLPLDEMLKVDISHTPQMRGIYSRVRLNSELSRRNM 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           + L ++ S N  A ++A         F++ MN  ++ LG+S T ++   G+    + +TA
Sbjct: 121 MLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKARALGMSHTRYVEPTGL-AIENVSTA 179

Query: 168 RDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFT 221
           RD++ L      + +                      + NTN  V          KTGFT
Sbjct: 180 RDLSKLLLATRRYPLIGQLSTTREDMASFRRPNYILPFRNTNHLVYRPDWNIQLTKTGFT 239

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V   +   + +  V+L A  + T    ++ L   
Sbjct: 240 NEAGHCLVMRTVINQRPVSLVVLDAFGKYTHFADASRLRQW 280


>gi|296501957|ref|YP_003663657.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|296323009|gb|ADH05937.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 428

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 78/338 (23%), Positives = 132/338 (39%), Gaps = 31/338 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +                       + P  +        + T +D  TG V+ 
Sbjct: 5   KKILVFITVICSFFLTPITLRAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDVLY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAYHRAYPASTTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNEKAKQLGAKDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
            HYTT  DMA+++   +   +  Q M+  +      +                + G KTG
Sbjct: 180 NHYTTPYDMAMITKGVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSNFFENPYSIGGKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---I 276
           FT  +   +V    +    +I+V++ A  R    +    +    F   T +  ++     
Sbjct: 240 FTNEARNTLVLLNEKDGNRIISVVM-ASQRPEIYEDLKQMAEYSFGQFTKQMVLDKHNWH 298

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            K  Y     N     S E+   + E  N  T  + A 
Sbjct: 299 QKTTYLNKDVNSELEQSAELMLKKDEGKNVKTIFRAAS 336


>gi|296390777|ref|ZP_06880252.1| D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa PAb1]
          Length = 310

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 21/279 (7%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDH 49
           MR + L ++ + +  ++   +S +   K               + D NTG V+    PD 
Sbjct: 1   MRNRLLSLVTLFLSLSVATAVSASPPPKAGLPLQQELASGSALVTDQNTGKVLYSRNPDL 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNAL 108
               AS+TKLMTA VV          L   + I     SE     S  + GS ++  + L
Sbjct: 61  VVPIASITKLMTAMVVLDSK----LPLDEVLPIAISETSEMRGVFSRVRVGSQISRRDML 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A++    +  FV+ MN  +  LG+  T ++   G+  H   T   
Sbjct: 117 LLALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARD 176

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
              +L    +            K +  +   Y     NTN  +          KTGFT  
Sbjct: 177 LTRLLVASRQYPLLSQWSTTPEKTVAFRHPNYTLGFRNTNHLINNKTWNIQLTKTGFTNE 236

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V         +  V+L A  + T    +  L   
Sbjct: 237 AGHCLVMRTTINRNPVNLVVLDAFGKYTHFADATRLRRW 275


>gi|30020624|ref|NP_832255.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|229044252|ref|ZP_04191925.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|229109961|ref|ZP_04239541.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|229127903|ref|ZP_04256888.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|29896176|gb|AAP09456.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|228655547|gb|EEL11400.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|228673482|gb|EEL28746.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|228725077|gb|EEL76361.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
          Length = 338

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L +KK  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDKKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L       N+ G+  + +    TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNNTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|290891993|ref|ZP_06554990.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290558587|gb|EFD92104.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 272

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGKPLYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDETLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MN  +  L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNRQATKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T+F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSRTNFVSASGLDVDGKTAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDEGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTPEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|110800730|ref|YP_696485.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens ATCC 13124]
 gi|168206144|ref|ZP_02632149.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|168210835|ref|ZP_02636460.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|168215430|ref|ZP_02641055.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens NCTC 8239]
 gi|169343584|ref|ZP_02864583.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|110675377|gb|ABG84364.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens ATCC 13124]
 gi|169298144|gb|EDS80234.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|170662405|gb|EDT15088.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170711129|gb|EDT23311.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|182382120|gb|EDT79599.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 291

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 13/246 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
              +    D     ++ E         AS TK++TA V  ++       L   +TISK A
Sbjct: 55  DAHFAIAYDAKNKKILYEKNAFRNVPMASTTKILTALVAINYSD-----LDEEVTISKTA 109

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S   F+ G  +T+   L  L+ KS ND A+AIAE +  + + F   MN+ ++ LG
Sbjct: 110 ASIRGSKVGFRAGEKVTMRELLFGLMYKSGNDAAIAIAEHIGGSIENFSILMNDFARMLG 169

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPN 202
           L  ++F + HG+    H+++A D+A+L      + P +      K +  +       Y N
Sbjct: 170 LKDSNFQSPHGLDSQMHFSSAYDLAVLMS-KAMEEPFFREISGTKEVGAEKYNFTRSYSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +     A+G KTG+T  +G  +V+S     +++I V+L       R + +  +   
Sbjct: 229 INKMLWRLPNANGGKTGYTGQAGKCLVSSVDHNGRNIIIVVLNCPT---RWEATERVYEY 285

Query: 263 GFYNKT 268
              N +
Sbjct: 286 VKANYS 291


>gi|292487716|ref|YP_003530589.1| penicillin-binding protein 7 [Erwinia amylovora CFBP1430]
 gi|292898950|ref|YP_003538319.1| penicillin-binding protein 7 [Erwinia amylovora ATCC 49946]
 gi|291198798|emb|CBJ45907.1| penicillin-binding protein 7 [Erwinia amylovora ATCC 49946]
 gi|291553136|emb|CBA20181.1| penicillin-binding protein 7 [Erwinia amylovora CFBP1430]
          Length = 316

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 105/281 (37%), Gaps = 24/281 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           +R FL+ +AM          + A                     ++D N+  VI +++PD
Sbjct: 5   IRLFLLSLAMLFSIPFLMNQAAARAHQPEVSGAVQPDIASGSAMIVDLNSNKVIYQSHPD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNA 107
                AS+TKLMT  V           L   + +   +  +     S  +  S ++  N 
Sbjct: 65  RVRPIASITKLMTVMVTLDA----HLPLDEMLKVDISHTPQMRGIYSRVRLNSELSRRNM 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           + L ++ S N  A ++A         F++ MN  ++ LG+S T ++   G+    + +TA
Sbjct: 121 MLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKARALGMSHTRYVEPTGL-AIENVSTA 179

Query: 168 RDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFT 221
           RD++ L      + +                      + NTN  V          KTGFT
Sbjct: 180 RDLSKLLLATRRYPLIGQLSTTREDMASFRRPNYILPFRNTNHLVYRPDWNIQLTKTGFT 239

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V   +   + +  V+L A  + T    ++ L   
Sbjct: 240 NEAGHCLVMRTVINQRPVSLVVLDAFGKYTHFADASRLRQW 280


>gi|229024081|ref|ZP_04180554.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228737223|gb|EEL87745.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
          Length = 338

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +   ++   F       T +     L+DTN+G ++ +     P   A+L+KLMT Y
Sbjct: 11  LLSFLITVLIVLYFYLYVNGPTIRAKSAILIDTNSGEIVYKKNERTPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L + K  L   + I     +   S          T+ + L  L++   N  A+A+
Sbjct: 71  IVMEQLHDGKIQLDESVKIRNEVFQTETSPIQVTSKDNTTVRDLLHALLLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAILSWRIKT 179
           AE +   E  F   MN  +K L LS           +        TTA D A ++ ++  
Sbjct: 131 AEHIAGNEDNFTSLMNEKAKQLKLSQQSPFLNSTGINSEKNRQSITTAIDAAEIAAQLIK 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           D+P  ++  +        K     N     +           DG+++  +    ++ V++
Sbjct: 191 DYPDVLNITKQTSYRFTFKDVQVFNTNKMIYSLNKNIKLKDVDGLQSSLSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A QGD   I+V+L A + NT    +  LL  GF 
Sbjct: 251 ANQGDTRFISVVLDANEENTAFVETKKLLQYGFE 284


>gi|206977836|ref|ZP_03238725.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|206743933|gb|EDZ55351.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
          Length = 428

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +  L                    + P           + T +D  TG V+ 
Sbjct: 5   KKILVFITVICLFFLTPMTLRAETNVGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDVLY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +    +     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSIYFENPFSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S EV   + E  N  T  + A   +     + K       + 
Sbjct: 298 HQKTTYLNKDIDSELEKSAEVMLKKDEGKNVRTIFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|300119331|ref|ZP_07057009.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           SJ1]
 gi|298723286|gb|EFI64050.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           SJ1]
          Length = 338

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/281 (24%), Positives = 121/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++  +++   +++ +    F         +     L+D N+G V+ +   +      +L
Sbjct: 4   LKKITILLLSFVITTLIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEETSIQSDTL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L +    L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNKGNIQLDEVVQISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N   +A+AE +   E  F Q MN  +K L L       NA G+    +    TTA ++  
Sbjct: 124 NRSTLALAEHIAGNEDNFTQLMNEKAKQLKLPQPSPFLNATGMNNGTNKLSTTTAIEVGK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+ TDFP  ++  ++   +   K     N     +         G DG++T F+  S
Sbjct: 184 LATRLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNS 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 244 NYSFVSTAKRGDTRLISVILDADNENSTFIETKKLLQYGFD 284


>gi|289422780|ref|ZP_06424618.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           anaerobius 653-L]
 gi|289156810|gb|EFD05437.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           anaerobius 653-L]
          Length = 313

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/307 (23%), Positives = 109/307 (35%), Gaps = 35/307 (11%)

Query: 1   MRQFLVIIAMAMLSN----IFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHP 50
           +++   I A  +LS      F    +AE      + K  Y  L+D  +G +I +   D  
Sbjct: 3   IKKINSIFAALVLSTGILTYFTSGVLAEGKEDFNSLKSKYMVLMDYESGKIIYKKNADQK 62

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS TK+ TAY V    +     L   I I         S    +     T      L
Sbjct: 63  IYPASTTKIWTAYCVLQKCQ----DLNEKIKIGTMPEIEGSSMYLEEGEVFTTRQLLESL 118

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           LI  S +   V         E+KF+  MN+ +K  G + THF N HG+    HYTTA +M
Sbjct: 119 LIHSSNDVAYVLARHYGGGDERKFIDFMNSEAKKFGFNHTHFNNPHGLPDTDHYTTAEEM 178

Query: 171 AILSWRIKTDFP--------------------QYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
             ++     +                          Y   K L    +   N       +
Sbjct: 179 TNMARIAYGNDIIKSIVAKKSVTFKKSNEIKLDRELYNSNKFLNSNMQMNYNGKDIPMKY 238

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
              DG+KTG+T  +G  +VA+  +    +I+ +  A    +    S  LL  GF N    
Sbjct: 239 DVVDGIKTGYTDDAGNCLVATGTKNKIRMISGVFFAPSG-SLYHDSRFLLDYGFENFKSI 297

Query: 271 KKINYII 277
                  
Sbjct: 298 IIYKKSD 304


>gi|229178878|ref|ZP_04306238.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
 gi|228604643|gb|EEK62104.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
          Length = 338

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 66/281 (23%), Positives = 117/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L            +        TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKAKELKLLQPSPFLNSTGINNDTDKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ ++  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAAKLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|18310783|ref|NP_562717.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens str.
           13]
 gi|168214376|ref|ZP_02640001.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|18145464|dbj|BAB81507.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens str.
           13]
 gi|170714164|gb|EDT26346.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens CPE str. F4969]
          Length = 291

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 13/246 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
              +    D     ++ E         AS TK++TA V  ++       L   +TISK A
Sbjct: 55  DAHFAIAYDAKNKKILYEKNAFRNVPMASTTKILTALVAINYSD-----LDEEVTISKTA 109

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S   F+ G  +T+   L  L+ KS ND A+AIAE +  + + F   MN+ ++ LG
Sbjct: 110 ASIRGSKVGFRAGEKVTMRELLFGLMYKSGNDAAIAIAEHIGGSIENFSILMNDFARMLG 169

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPN 202
           L  ++F + HG+    H+++A D+A+L      + P +      K +  +       Y N
Sbjct: 170 LKDSNFQSPHGLDSQMHFSSAYDLAVLMS-KAMEEPFFREISGTKEVGAEKYNFTRSYSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +     A+G KTG+T  +G  +V+S     +++I V+L       R + +  +   
Sbjct: 229 INKMLWRLPNANGGKTGYTGQAGKCLVSSVDHNGRNIIIVVLNCPT---RWEATERVYEY 285

Query: 263 GFYNKT 268
              N +
Sbjct: 286 VKANYS 291


>gi|256380453|ref|YP_003104113.1| Serine-type D-Ala-D-Ala carboxypeptidase [Actinosynnema mirum DSM
           43827]
 gi|255924756|gb|ACU40267.1| Serine-type D-Ala-D-Ala carboxypeptidase [Actinosynnema mirum DSM
           43827]
          Length = 669

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 11/249 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                    + + D ++G V+A   P     PAS+ K++ A V           L + +T
Sbjct: 77  APSGITAKTWLVADMDSGAVLAAYDPHGRQRPASVIKVLLAMVAAKE-----LPLDSQMT 131

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
             +  +E   +    K G+T T++  L+ L++ S ND+A A+A  L        + MN  
Sbjct: 132 AIEEDTEQECTCIGLKAGNTYTVEQLLQSLVMASGNDVANALARRLGGLPSAI-RKMNAL 190

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG----LEIKG 197
           +  LG   T  +   G+   G  T+A D+A++                 +      E   
Sbjct: 191 ATELGARDTRAITPSGLDAPGTSTSAYDVALIFRAAMKYPDFARAIATQRIEFPAEEGGT 250

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV-S 256
           K   N N  + ++ GA G KTGFT  +    V +A +  + L+AV+L A  +  R    +
Sbjct: 251 KPVINDNRLMTSYAGALGGKTGFTDDAQHTYVGAAERDGRRLVAVLLRAQQQPLRTTDQA 310

Query: 257 ASLLSMGFY 265
           A LL  GF 
Sbjct: 311 ARLLDYGFS 319


>gi|255602672|ref|XP_002537900.1| d-alanyl-d-alanine carboxypeptidase, putative [Ricinus communis]
 gi|223514649|gb|EEF24482.1| d-alanyl-d-alanine carboxypeptidase, putative [Ricinus communis]
          Length = 269

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 12/267 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  VI A+ + +      +       P   + D   G V+ E   D     ASLTKLM
Sbjct: 1   MKK--VICALLLAATSLCARADTPPLYSPSVIVYDVTRGEVLLEKNADDLRPIASLTKLM 58

Query: 61  TAYVVFSFLKEKKAMLT-TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           TA VV    +E    LT     I +       S S    G+++  +  L+L ++ S N  
Sbjct: 59  TAMVVLDKAQEMGDTLTIDEADIDRLKH----SGSRIPVGTSLKREAMLRLALMSSENRA 114

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A++ S    +  F++ MN  ++ L +S THF +  G+    + +TARD+  L+     
Sbjct: 115 ASALSRSFPGGQPAFIEQMNLKARGLSMSGTHFEDPTGL-SPDNVSTARDVVKLAIEASH 173

Query: 180 DFPQYMHYFQIKGLEI---KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQG 235
                +        +    + + Y NT+  V          KTG+T  +G  IV      
Sbjct: 174 YPMISLFTTLTAYEQTIGNRTRFYHNTDPVVRWTDWDVQLAKTGYTREAGRCIVVDVAMP 233

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSM 262
              +I  +LGA     R+   A++ + 
Sbjct: 234 RGPVIIALLGARSARARSADLATIRNW 260


>gi|228938491|ref|ZP_04101100.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971370|ref|ZP_04131997.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977982|ref|ZP_04138362.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228781770|gb|EEM29968.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228788406|gb|EEM36358.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821228|gb|EEM67244.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 407

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 70/308 (22%), Positives = 130/308 (42%), Gaps = 17/308 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDVMYDKNAYHRAYPASTTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I+V++ A  R  
Sbjct: 191 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIISVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
             +    +    F   T +  ++         N   +   ++++V +  ++      +  
Sbjct: 250 IYEDLKQMADYSFGQFTKQTVLDK-------HNWHQKTTYLNKDVSSELEKSAELMLKKD 302

Query: 312 EAKDKESH 319
           E K+ ++ 
Sbjct: 303 EGKNVKTI 310


>gi|255026482|ref|ZP_05298468.1| hypothetical protein LmonocytFSL_09353 [Listeria monocytogenes FSL
           J2-003]
          Length = 272

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEALYEQNADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLNLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|322381652|ref|ZP_08055618.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321154392|gb|EFX46702.1| D-alanyl-D-alanine carboxypeptidase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 322

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 27/263 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   ++D ++G  +     +    PAS TK+++A V               IT+  
Sbjct: 61  EIAGEAAFVMDLDSGETLFYKNENKKMYPASTTKILSALVALEK-----GNPNDVITVGD 115

Query: 85  NASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK--------- 133
             +      S++   +G  + L + +  +++ S ND A  ++  +   +K          
Sbjct: 116 EVNLKTAGESSAGLVQGQKLKLRDLIAGMMLPSGNDAARTVSRYVANRDKGKNISADEAN 175

Query: 134 --FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F   MN  +K +G + +HF+N+HG+    HY+T  DMA+++     +        +  
Sbjct: 176 VYFAGLMNKKAKEIGATKSHFVNSHGLHDPEHYSTVHDMALIAKEAMKNELFRNIVSKES 235

Query: 192 GLEI---KGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                    + Y N N          + G +G+KTGFT  +G+ +V+SA +  ++LI+V+
Sbjct: 236 YTTAAAKPAQTYVNRNKLLLQDNPVYYSGVNGIKTGFTDEAGYCLVSSARKNGKNLISVV 295

Query: 244 LGALDRNTRNKVSASLLSMGFYN 266
             +  R+     S  LL  GF  
Sbjct: 296 FHS-GRDNVWTDSQKLLDYGFDK 317


>gi|167461903|ref|ZP_02326992.1| D-alanyl-D-alanine carboxypeptidase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 317

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 27/263 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   ++D ++G  +     +    PAS TK+++A V               IT+  
Sbjct: 56  EIAGEAAFVMDLDSGETLFYKNENKKMYPASTTKILSALVALEK-----GNPNDVITVGD 110

Query: 85  NASEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK--------- 133
             +      S++   +G  + L + +  +++ S ND A  ++  +   +K          
Sbjct: 111 EVNLKTAGESSAGLVQGQKLKLRDLIAGMMLPSGNDAARTVSRYVANRDKGKNISADEAN 170

Query: 134 --FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F   MN  +K +G + +HF+N+HG+    HY+T  DMA+++     +        +  
Sbjct: 171 VYFAGLMNKKAKEIGATKSHFVNSHGLHDPEHYSTVHDMALIAKEAMKNELFRNIVSKES 230

Query: 192 GLEI---KGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                    + Y N N          + G +G+KTGFT  +G+ +V+SA +  ++LI+V+
Sbjct: 231 YTTAAAKPAQTYVNRNKLLLQDNPVYYSGVNGIKTGFTDEAGYCLVSSARKNGKNLISVV 290

Query: 244 LGALDRNTRNKVSASLLSMGFYN 266
             +  R+     S  LL  GF  
Sbjct: 291 FHS-GRDNVWTDSQKLLDYGFDK 312


>gi|291518495|emb|CBK73716.1| D-alanyl-D-alanine carboxypeptidase [Butyrivibrio fibrisolvens
           16/4]
          Length = 384

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 99/268 (36%), Gaps = 26/268 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       +++  TG  +          PAS TK+MTA +    ++  +  L TP+ +S 
Sbjct: 116 SLDARAALVMNATTGKALYSQGATDILEPASTTKIMTALLTIEAIEAGQISLETPVIVSP 175

Query: 85  NASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            A    P      +   + G    +D  L  ++V S       +AE +  +   FV  MN
Sbjct: 176 TAIAGMPLDASHVSPRIQAGEVFNIDQLLTAMMVSSDCHSCNVLAEVVAGSVPDFVSMMN 235

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY------------ 187
             +  LG + T+F N  G      YT A  + +++           ++            
Sbjct: 236 VKAAALGCTNTNFTNPSGYPDKNMYTNAYSLYLITANAIKHPLFNKYFNVSNAVLPATNL 295

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                +        N   +        G KTG    +G  +V  A Q ++++I+V+LGA 
Sbjct: 296 CATPRVLENTDAIINP-TSGYYNPYVIGGKTGTANRAGQCLVCVAKQNEKTVISVVLGAK 354

Query: 248 DRN--------TRNKVSASLLSMGFYNK 267
           +R          R   +  L+ MGF N 
Sbjct: 355 NRKMFDGNTISMRYYETNRLIDMGFTNY 382


>gi|296168851|ref|ZP_06850523.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896468|gb|EFG76118.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 413

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/280 (20%), Positives = 104/280 (37%), Gaps = 12/280 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G VIA   P     PAS+ K++ A    +     
Sbjct: 85  IVAAPDAPPLPTDVSADAWLVADLDSGAVIAAKDPHGRHRPASIIKVLVAMASINA---- 140

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  +   +    +    ++G   T++  L  L++ S ND A A+A  L   ++
Sbjct: 141 -LNLNKAVPGTAEDAAAEGTKVGVEEGGVFTVNQLLHGLLMHSGNDAAHALAMQLGGMQQ 199

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 200 AV-EKINVLAAKLGGKDTRAATPSGLDGPGMSTSAYDIGLFYRYAWQNPTFADIVATRTF 258

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A    + L+AV+L G 
Sbjct: 259 DFPGHGDHPGYELENDNQLLYNYPGALGGKTGYTDDAGQTFVGAANHNGRRLMAVLLHGT 318

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
                  + +A LL  GF      +  N I  D     + 
Sbjct: 319 RQPIAPWEQAAHLLDYGFATPQGTQVGNLIEPDPSLAPVK 358


>gi|52144058|ref|YP_082770.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|196040650|ref|ZP_03107949.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
 gi|51977527|gb|AAU19077.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus E33L]
 gi|196028440|gb|EDX67048.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
          Length = 428

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 33/333 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ L  I +  L                    + P           + T +D  TG ++ 
Sbjct: 5   KKILAFITVICLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPYSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             K  Y     +     S E+   + E  N  T
Sbjct: 298 HQKTTYLNKDIDSELEKSAELMLKKDEGKNVKT 330


>gi|46909001|ref|YP_015390.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46882274|gb|AAT05567.1| putative D-alanyl-D-alanine carboxypeptidase [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 272

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEPLYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGRRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|291531742|emb|CBK97327.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum 70/3]
          Length = 466

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 140/386 (36%), Gaps = 52/386 (13%)

Query: 1   MRQFL----VIIAMAMLSNIFPFLSIAET-------------NKLPYYTLLDTNTGHVIA 43
           M++ L     ++  AML       + AE                     +++T+TG V+ 
Sbjct: 1   MKKILRFASALLCGAMLLCSLSVTAFAENDDEVYDFDPNTDKIYSEAVYMVNTDTGDVVY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM------LTTPITISKNASEYPPSNSTFK 97
           +        PAS TK+MT  +    L E                  ++ +   PSN+  +
Sbjct: 61  KKNESKKMYPASTTKIMTCIIALEHLSEASLSKKVEVPYDCFNDFYEDPNYSDPSNAAIE 120

Query: 98  K-GSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                +T  + L  L++ SA + A  +A ++   +  KF+  MN  +K LG + T+F+NA
Sbjct: 121 PLQDNLTYKDCLYALMLPSACEAANILAYNIGGGSITKFIGMMNEKAKELGCTGTNFVNA 180

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-------- 207
           HG+    +YTTA D+  ++      FP +         E+         +++        
Sbjct: 181 HGLHNDNNYTTAEDLYKMTKYAYDKFPLFKKITSTYEYEMPKNDANPDGYSIYSTISLLR 240

Query: 208 ----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-------NTRNK-- 254
                 +  A G KTG T  +G  +  SA +   + I V LGA  +       +      
Sbjct: 241 PGSVYEYEYAYGTKTGTTDEAGRCL-VSAAKNQYNYILVTLGAPVKDKNGEYYDDWYSMI 299

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQ-----NLSNEVPNISEEVCTTQKEIINYNTQ 309
            + +L    F N      +N   +    +     + ++ +     +      + +  +  
Sbjct: 300 DALNLYKWAFTNFEMATVVNNDEQITEVKVEMGESATHVILTPESDYTALMPKSVKESGV 359

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
            K  K  ES     +K  +L     K
Sbjct: 360 QKVFKAYESVQAPVKKGDILGVMDVK 385


>gi|227891443|ref|ZP_04009248.1| D-alanyl-D-alanine serine family carboxypeptidase [Lactobacillus
           salivarius ATCC 11741]
 gi|227866590|gb|EEJ74011.1| D-alanyl-D-alanine serine family carboxypeptidase [Lactobacillus
           salivarius ATCC 11741]
          Length = 384

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 139/363 (38%), Gaps = 35/363 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + +++++ + +       +     A+        ++D  TG V+ +   D  +  ASLTK
Sbjct: 6   KNWIILVMLGIAIITGSGIMRGVRADKIDAKAAYMIDAGTGQVLYQQNADSKYPIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           ++T  V+   +  +K      I     +S  A+ +  SN    +G + T+ + ++ +++ 
Sbjct: 66  ILTLAVIMKDIHNQKLSWDQKIKVNKDVSDMANNWQYSNVQLNEGESYTVKSLVESMMIV 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------Q 160
           SA+    A+A +   + + F + M   +   G++     N  G+                
Sbjct: 126 SADGSTEALALADAGSVQAFNEKMKEVAHEAGVTDAEIYNMIGLPNSDLGNLKLKNVGDD 185

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--------- 211
             +  +A+D+A++S  +  ++P+ +   + K ++ K       N     ++         
Sbjct: 186 QENKFSAKDIALVSKYLVNNYPEVIDITKQKNVDFKISADQTYNMENINYMLEGSYAAPK 245

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTGFT  +G+  V +     Q +I VIL A D N +   +  ++     N   
Sbjct: 246 NGTIDGLKTGFTDEAGYCFVGTGTFNGQRVITVILNASDYNKQFAETNKMIETVMNN--- 302

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            K +N       +Q L  E   +++      K       + K     E       K   +
Sbjct: 303 DKVVNTKDIKSVKQALKKENLKVNDTNIWVTKNTDPKQIKAKLTLSNEKIKAKNAKNEKV 362

Query: 330 KNK 332
              
Sbjct: 363 GTI 365


>gi|237734723|ref|ZP_04565204.1| D-alanyl-D-alanine carboxypeptidase [Mollicutes bacterium D7]
 gi|229382051|gb|EEO32142.1| D-alanyl-D-alanine carboxypeptidase [Coprobacillus sp. D7]
          Length = 352

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 131/348 (37%), Gaps = 20/348 (5%)

Query: 2   RQFLVIIA--MAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++ L  +   + +++ + P  ++  +        Y   +D  +G V+     D    PAS
Sbjct: 3   KKILSFLLVGICLIATLTPIRALENSEDIGLTCDYAVAIDAKSGLVLYNKNMDERMYPAS 62

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  +    + + K       +      E   S++ F+ G T+T ++ L   I+ S
Sbjct: 63  MTKVMTVILALELMDDMKKTTVITQSDIDTVWETGASSANFEVGETVTYEDLLYGAILPS 122

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             D   A+A +LC +++ FV  MN  ++ L L  THF+N  G+    HYTT  DMA++  
Sbjct: 123 GADATRALANNLCGSQEAFVDKMNELAQKLNLKDTHFVNTTGIHDENHYTTVHDMALIVQ 182

Query: 176 RIKTD------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
               +      + Q          +   K   N   A        G K+G+T  +   + 
Sbjct: 183 YAIQNEDFKNIYAQRYKTSSNGLHQWVNKSMYNAKRAKINVDDILGCKSGYTNEAKSCLS 242

Query: 230 ASAIQGDQSLIAVILGALDRNTRN----KVSASLLSMGFYNKTDRKKINYIIK----DFY 281
           +     D  +I ++  +++ + +       +  +++    + + +  +    K    D  
Sbjct: 243 SLNRVNDNEIITIVGHSVNNDVKTHAAVSDTLDIMNYVGQHYSLQSILTKGAKVRTLDVT 302

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                 ++   +    +           ++     +      +K   L
Sbjct: 303 LAKDEQKIAITNLNDVSAFLPNDFNKDDLEYKYSFKKLEAPVKKGEKL 350


>gi|182625716|ref|ZP_02953485.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|177909118|gb|EDT71593.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens D str. JGS1721]
          Length = 291

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 11/245 (4%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
              +    D     ++ E         AS TK++TA V  ++       L   +TISK A
Sbjct: 55  DAHFAIAYDAKNKKILYEKNAFRNVPMASTTKILTALVAINYSD-----LDEEVTISKTA 109

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S   F+ G  +T+   L  L+ KS ND A+AIAE +  + + F   MN+ ++ LG
Sbjct: 110 ASIRGSKVGFRAGEKVTMRELLFGLMYKSGNDAAIAIAEHIGGSIENFSILMNDFARMLG 169

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---KYPNT 203
           L  ++F + HG+    H+++A D+A+L  +   +          +    K      Y N 
Sbjct: 170 LKDSNFQSPHGLDSQMHFSSAYDLAVLMSKAMEEPFFREISGTNEVGAEKYNFTRSYSNI 229

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           N  +     A+G KTG+T  +G  +V+S     +++I V+L       R + +  +    
Sbjct: 230 NKMLWRLPNANGGKTGYTGQAGKCLVSSVDHNGRNIIIVVLNCPT---RWEATERVYEYV 286

Query: 264 FYNKT 268
             N +
Sbjct: 287 KANYS 291


>gi|42780462|ref|NP_977709.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
 gi|42736381|gb|AAS40317.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
          Length = 428

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 78/359 (21%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ L  I +  L                    + P           + T +D  TG ++ 
Sbjct: 5   KKILAFITVICLFFLTPMTLRAETNVGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S EV   + E  N  T  + A   +     + K       + 
Sbjct: 298 HQKTTYLNKDIDSELEKSAEVMLKKDEGKNVRTIFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|110801499|ref|YP_699085.1| penicillin-binding protein 5* precursor [Clostridium perfringens
           SM101]
 gi|110682000|gb|ABG85370.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens SM101]
          Length = 291

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 13/246 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
              +    D     ++ E         AS TK++TA V  ++       L   +TISK A
Sbjct: 55  DAHFAIAYDAKNKKILYEKNAFRNVPMASTTKILTALVAINYSD-----LDEEVTISKTA 109

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S   F+ G  +T+   L  L+ KS ND A+AIAE +  + + F   MN+ ++ LG
Sbjct: 110 ASIRGSKVGFRAGEKVTMRELLFGLMYKSGNDAAIAIAEHIGGSIENFSILMNDFARMLG 169

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPN 202
           L  ++F + HG+    H+++A D+A+L      + P +      K +  +       Y N
Sbjct: 170 LKDSNFQSPHGLDSQMHFSSAYDLAVLMS-KAMEEPFFREISGTKEVGAEKYNFTRSYSN 228

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +     A+G KTG+T  +G  +V+S     +++I V+L       R + +  +   
Sbjct: 229 INKMLWRLPNANGGKTGYTGQAGKCLVSSVDHNGRNIIIVVLNCPT---RWEATERVYEY 285

Query: 263 GFYNKT 268
              N +
Sbjct: 286 VKANYS 291


>gi|227530036|ref|ZP_03960085.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350068|gb|EEJ40359.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus vaginalis
           ATCC 49540]
          Length = 411

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 136/375 (36%), Gaps = 43/375 (11%)

Query: 1   MRQFLVIIAMAMLSNI-----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +  ++  +L            S A+        ++D +TG +I +   +     AS
Sbjct: 1   MKKVIAFLSTLLLMICCVVARPQTASAAQMIDSRSAIMIDADTGQIIYQQNSEEKLPIAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF----KKGSTMTLDNALKLL 111
           ++KL+T  V+   +   +    T + ISK  +E    ++      + G + T+       
Sbjct: 61  ISKLLTVSVIEDEINHHQLSWNTKVKISKKIAEVSNDSNYSAIGLQAGQSYTVRELFNAT 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------- 158
           ++KSA+  A+A+A +   T K+F + M   ++ +G++    +N  G+             
Sbjct: 121 LIKSADGAALALATADGSTIKQFNEKMQKKARQIGITDATIVNPVGLKNGDLKGLKQAGI 180

Query: 159 -VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLG 212
                +  TARD+A++S  +   +P  +        +      K K+  N N  +     
Sbjct: 181 SNNAENSMTARDVALMSQYLVKHYPSVLKVTSQPKAQFTIAKGKTKEVENLNKMLSGGKY 240

Query: 213 ------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA--LDRNTRNKVSASLLSMGF 264
                  DG+KTG + A+G    ++       LI V+L A   D++ R   +  L     
Sbjct: 241 TVDGVQIDGLKTGTSEAAGACFASTGSYQGHRLITVVLHANGKDKDARFTQTQKLYQYFI 300

Query: 265 YNKTDRKKI--NYIIKDFYQQNLSNEVPNISEEVCTTQ-KEIINYNTQMKEAKDKESHF- 320
            N   +         +          +          Q ++   Y  Q +  K   +H  
Sbjct: 301 QNAHQQVLTLNKKQSQKRVSNGTKRMLTVGPHSFTVWQMQKTAQYTIQPRYYKHLTNHKA 360

Query: 321 ---IDFEKITLLKNK 332
                 +K   L   
Sbjct: 361 RLNAPVKKGERLGTI 375


>gi|168704549|ref|ZP_02736826.1| D-alanyl-D-alanine carboxypeptidase [Gemmata obscuriglobus UQM
           2246]
          Length = 304

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 21/261 (8%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                   + + D  TG V+       P   AS TK+MTAY+V     E   +L   +T 
Sbjct: 42  PPVVSAKGWAVADGKTGKVLWGGNEKDPLPIASTTKIMTAYIVLKLAAEDAKVLDEVLTF 101

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH----- 137
           S+ A +   S+S  K G  + +   L  L++ S ND A A AE      K   +      
Sbjct: 102 SEAADKVVGSSSDLKAGDKVAVRELLYGLLLPSGNDAAHAFAEHFGPRFKSVGKEQDPVA 161

Query: 138 -----MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
                MN T+K L +  T++++ HG+    +  + RD+  L++    D     +    + 
Sbjct: 162 SFVAQMNATAKALKMGETNYLDPHGLT--RNVASPRDLVTLAFHAMKDPAFAKYVQTRRH 219

Query: 193 L--------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                      +   + NTN  +    G +G+KTG T A+G  +V+        LI V L
Sbjct: 220 KCTVTDKDGNAREVTWNNTNKLLDI-EGYEGIKTGTTTAAGACLVSCGTLNGDRLIVVAL 278

Query: 245 GALDRNTRNKVSASLLSMGFY 265
           G+   + R   S +L    + 
Sbjct: 279 GSTSSDNRYTDSRNLYRWAWA 299


>gi|260584324|ref|ZP_05852071.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella elegans
           ATCC 700633]
 gi|260157842|gb|EEW92911.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella elegans
           ATCC 700633]
          Length = 442

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 134/352 (38%), Gaps = 41/352 (11%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
           IA    +  Y  ++  +G ++ E   D     AS++K+++ Y++   +K  +    T I 
Sbjct: 19  IAALEDVASYIAIEQTSGKILMEKNQDDVRGIASMSKMVSQYLILEAIKNSEITWETKIP 78

Query: 82  ISKN----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           IS+     ++ Y  SN         ++    +   + SAN   +A+AE L  +E K+V+ 
Sbjct: 79  ISERASKLSANYSLSNVPLWPNEKYSIQELFEASSIYSANAATIAMAEYLAGSEAKWVER 138

Query: 138 MNNTSKNLGLSATHFMNAHGVVQH--------------GHYTTARDMAILSWRIKTDFPQ 183
           M    ++ G+     +NA G+                  +  +AR +AI++ R+  DFP+
Sbjct: 139 MKEKVESWGIHDATIVNATGLPNKYGTTEKNPDFGDEAENSMSARSVAIVARRLVLDFPE 198

Query: 184 YMHYFQI-----KGLEIKGKKYPNTNWAVG----TFLGADGMKTGFTCASGFNIVASAIQ 234
            +    +     +       K  N N+ +      + G +G+KTG +  SG +I  +A +
Sbjct: 199 ILKISSVATKEFRPGTAGVTKMDNFNYLIPGLLFGYDGVNGLKTGTSEISGASITTTATR 258

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT------DRKKINYIIKDFYQQNLSNE 288
            + S+I V +G+     R KV+  +L   F            K +  I           +
Sbjct: 259 NNFSVIVVTMGSKQPLNRFKVTTKMLDELFKKYEGLVVGIPGKSVQNIQPYPVNGGADEK 318

Query: 289 VP-NISEEVCTTQKE-------IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +  +  +       +        + +    +   +  +          + N 
Sbjct: 319 ISVDYGDNFVAAVPKGTAMSQVKVRFEPFKELLDENNALQAPITAGKTIGNL 370


>gi|149179839|ref|ZP_01858344.1| hypothetical protein BSG1_02450 [Bacillus sp. SG-1]
 gi|148852031|gb|EDL66176.1| hypothetical protein BSG1_02450 [Bacillus sp. SG-1]
          Length = 385

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 16/279 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFL----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++ ++ I +  ++                      ++D  TG ++         +PAS+
Sbjct: 1   MKKVIIAILLIFITAQTATAEEEYQKPSMLFSESGVMIDMETGTILYSKNAKRRMSPASI 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+ TA             L + +TISK A+E   S+    +G  MTL   L  +++ S 
Sbjct: 61  TKVATAIYAVEK-----GDLNSLVTISKEAAETEGSSVYLLEGEKMTLKQLLIGMMINSG 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTS-KNLGLSATHFMNAHGVVQHGHYTTARDM----A 171
           ND A AIAE L  + ++F +++N    +  G   THF N HG+ +  HYTTA DM    +
Sbjct: 116 NDAAAAIAEHLDGSVEQFSENINQFLEEKAGAKDTHFTNPHGLYEKDHYTTAEDMALITS 175

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT--FLGADGMKTGFTCASGFNIV 229
                        +     KG       Y +     G   +    G K G+   S   +V
Sbjct: 176 YAMKNEAFQDLFALKEIGWKGEGWNTTLYNHHKMVKGEVVYPEVTGGKNGYVDESKHTLV 235

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            +A   + S+  V+L A  +      ++ LL  G    +
Sbjct: 236 TTASNENLSVAVVLLKAQSKTAAYNDTSVLLDYGLNQFS 274


>gi|62184714|ref|YP_219499.1| putative D-alanyl-d-alanine carboxypeptidase [Chlamydophila abortus
           S26/3]
 gi|62147781|emb|CAH63526.1| putative D-alanyl-d-alanine carboxypeptidase [Chlamydophila abortus
           S26/3]
          Length = 433

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 129/368 (35%), Gaps = 44/368 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +R F     +  L+ +F             +     ++ T TG V+     D    PAS+
Sbjct: 2   IRVFFTFALLPFLAGLFTHPVHGQIVFPETRGNAVAVVHTETGKVLYAKDLDKRIYPASM 61

Query: 57  TKLMTAYVVFSFL-----KEKKAMLTTPITISKNASEYPPSNSTFKK------------G 99
           TK+ TA  +         +          +I+  A +     S                 
Sbjct: 62  TKIATALFILKKHPDVLNRFIIVKPDAIASITPQAKKQSGYRSPPHWLETDGVTIQLQNK 121

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
             ++  +    L++ SAND A A+A +   +  +F++ +N   + LG   THF N HG+ 
Sbjct: 122 EEVSGWDLFHALLICSANDAANALAIACSGSVAEFMKQLNQFLRELGCDHTHFNNPHGLH 181

Query: 160 QHGHYTTARDMAILSWRIKTDF-------PQYMHYFQIKGLEIKGKKYPNT---NWAVGT 209
              HYTTA D+  +      +                    E +     N      +   
Sbjct: 182 HPDHYTTAGDLIRIMREGLKEPLFRQVIRTTNYTMAPTNLSEERILHLTNKLILPGSTYY 241

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           +  A G KTG T  +G N+V +A +  +S+I +  G    +   +   +L    F  +  
Sbjct: 242 YPPALGGKTGTTKDAGRNLVFAAKKHGRSIITIAAGYSAMSELYEDVIALCEGVFNEQPL 301

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH-------FID 322
           R+ +    + +  +        +  ++     + + Y+    E ++ ++         + 
Sbjct: 302 RRYLIPPTETYPLR------LGLLGKISIPLPDGVYYDFYASEGEEPKTVSFVPHATKLP 355

Query: 323 FEKITLLK 330
            +K  LL 
Sbjct: 356 IQKGDLLG 363


>gi|229101975|ref|ZP_04232689.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228681558|gb|EEL35721.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 428

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 75/354 (21%), Positives = 141/354 (39%), Gaps = 32/354 (9%)

Query: 4   FLVIIAMAMLS---------------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           F+ +I++ +L+                + P           +   +D  TG ++ +    
Sbjct: 10  FITVISLFLLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFAATIDAKTGDLLYDKNAH 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGSTMTLDN 106
           H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T+  + 
Sbjct: 70  HRAFPASVTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGETVNRNT 124

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+    HYTT
Sbjct: 125 ALMILMVLSANDVSYAIAEHIGGSVENFANMMNEKAKQLGATDSHFVTPNGLHDPNHYTT 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKTGFTCA 223
             D+A+++      +P+ +     K   +   +   + +    +     + G KTGFT  
Sbjct: 185 PYDIAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSIYFENPYSIGGKTGFTNE 243

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDF 280
           +   +V    +    +I V++ A  R    +    +    F   T +  ++      K  
Sbjct: 244 ARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMAEYSFGQFTKQTVLDKHSWHQKTT 302

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           Y     +     S E+   + E  N  T  + A   +     + K       + 
Sbjct: 303 YLNKDIDSELEKSAELMLKKDEGKNVKTIFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|313105750|ref|ZP_07792013.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa 39016]
 gi|310878515|gb|EFQ37109.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa 39016]
          Length = 310

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 21/279 (7%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDH 49
           MR + L ++ + +  ++   +S +   K               + D NTG V+    PD 
Sbjct: 1   MRNRLLSLVTLFLSLSVATAVSASPPPKAGLPLQQELASGSALVTDQNTGKVLYSRNPDL 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNAL 108
               AS+TKLMTA VV          L   + I     SE     S  + GS ++  + L
Sbjct: 61  VVPIASITKLMTAMVVLDSK----LPLDEVLPIAISETSEMRGVFSRVRVGSQISRRDML 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A++    +  FV+ MN  +  LG+  T ++   G+  H   T   
Sbjct: 117 LLALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARD 176

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
              +L    +            K +  +   Y     NTN  +          KTGFT  
Sbjct: 177 LTRLLVASRQYPLLSQWSTTPEKTVAFRHPNYTLGFRNTNHLINNKTWNIQLTKTGFTNE 236

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V         +  V+L A  + T    +  L   
Sbjct: 237 AGHCLVMRTTINRSPVNLVVLDAFGKYTHFADATRLRRW 275


>gi|1518782|gb|AAC46341.1| penicillin-binding protein 5 [Pseudomonas aeruginosa]
          Length = 311

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 21/279 (7%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDH 49
           MR + L ++ + +  ++   +S +   K               + D NTG V+    PD 
Sbjct: 1   MRNRLLSLVTLFLSLSVATAVSASPPPKAGLPLQQELASGSALVTDQNTGKVLYSRNPDL 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNAL 108
               AS+TKLMTA VV          L   + I     SE     S  + GS ++  + L
Sbjct: 61  VVPIASITKLMTAMVVLDSK----LPLDEVLPIAISETSEMRGVFSRVRVGSQISRRDML 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A++    +  FV+ MN  +  LG+  T ++   G+  H   T   
Sbjct: 117 LLALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARD 176

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
              +L    +            K +  +   Y     NTN  +          KTGFT  
Sbjct: 177 LTRLLVASRQYPLLSQWSTTPEKTVAFRHPNYTLGFRNTNHLINNKTWNIQLTKTGFTNE 236

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V         +  V+L A  + T    +  L   
Sbjct: 237 AGHCLVMRTTINRSPVNLVVLDAFGKYTHFADATRLRRW 275


>gi|15596066|ref|NP_249560.1| D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa PAO1]
 gi|107100327|ref|ZP_01364245.1| hypothetical protein PaerPA_01001352 [Pseudomonas aeruginosa PACS2]
 gi|116048793|ref|YP_792407.1| D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893162|ref|YP_002442031.1| D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa LESB58]
 gi|254239222|ref|ZP_04932545.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa C3719]
 gi|254245156|ref|ZP_04938478.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa 2192]
 gi|12230964|sp|P72161|PBP5_PSEAE RecName: Full=D-alanyl-D-alanine endopeptidase;
           Short=DD-endopeptidase; AltName: Full=Penicillin-binding
           protein 5; Short=PBP-5; Flags: Precursor
 gi|9946767|gb|AAG04258.1|AE004521_9 D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa PAO1]
 gi|115584014|gb|ABJ10029.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126171153|gb|EAZ56664.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa C3719]
 gi|126198534|gb|EAZ62597.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa 2192]
 gi|218773390|emb|CAW29202.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa LESB58]
          Length = 310

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 21/279 (7%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDH 49
           MR + L ++ + +  ++   +S +   K               + D NTG V+    PD 
Sbjct: 1   MRNRLLSLVTLFLSLSVATAVSASPPPKAGLPLQQELASGSALVTDQNTGKVLYSRNPDL 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNAL 108
               AS+TKLMTA VV          L   + I     SE     S  + GS ++  + L
Sbjct: 61  VVPIASITKLMTAMVVLDSK----LPLDEVLPIAISETSEMRGVFSRVRVGSQISRRDML 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A++    +  FV+ MN  +  LG+  T ++   G+  H   T   
Sbjct: 117 LLALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARD 176

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
              +L    +            K +  +   Y     NTN  +          KTGFT  
Sbjct: 177 LTRLLVASRQYPLLSQWSTTPEKTVAFRHPNYTLGFRNTNHLINNKTWNIQLTKTGFTNE 236

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V         +  V+L A  + T    +  L   
Sbjct: 237 AGHCLVMRTTINRSPVNLVVLDAFGKYTHFADATRLRRW 275


>gi|226330783|ref|ZP_03806301.1| hypothetical protein PROPEN_04704 [Proteus penneri ATCC 35198]
 gi|225201578|gb|EEG83932.1| hypothetical protein PROPEN_04704 [Proteus penneri ATCC 35198]
          Length = 239

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 6/212 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ +    +      +A   +   Y L+D N+G ++A   PD   +PASLTK+M++YVV 
Sbjct: 18  LLLIISSPSFAVNNPVAPQIEAKSYVLMDYNSGKILASEKPDERLDPASLTKIMSSYVVG 77

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIA 120
             +KE +      + + +NA                K G  + + +  + ++++S ND +
Sbjct: 78  QAIKEGRMSPDDMVIVGRNAWATGNPVLKGSSLMFLKPGDQVKVIDLNRGMVIQSGNDAS 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           +A+AE +  +++ FV  MN+ +KNLGL  T+F   HG+   G YTTA+DMA+L+  +  D
Sbjct: 138 IALAEHIAGSQETFVDLMNSYAKNLGLKNTYFKTVHGLDSEGQYTTAQDMALLTAAMIRD 197

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            P      + K       + PN N  +     
Sbjct: 198 VPSEYEIHKEKEFTFNNIRQPNRNRLLWNKKY 229


>gi|332297402|ref|YP_004439324.1| Serine-type D-Ala-D-Ala carboxypeptidase [Treponema brennaborense
           DSM 12168]
 gi|332180505|gb|AEE16193.1| Serine-type D-Ala-D-Ala carboxypeptidase [Treponema brennaborense
           DSM 12168]
          Length = 457

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 27/295 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+DT  G ++ E   D    PAS+TKL+  YVVF  +   +  L+  + +  
Sbjct: 72  DVYSGAAILVDTANGCILFEKNADDVIPPASMTKLVVMYVVFQEIAAGRISLSDVVPLPP 131

Query: 85  NASEYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +               +G T+TL+  L  L V S ND AVA+A+ +  +   FV  MN 
Sbjct: 132 ESWAVNAPPNSSLMFLGQGQTVTLEELLLGLAVASGNDAAVAVADYVSGSVGAFVDRMNA 191

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTT----------------ARDMAILSWRIKTDFPQY 184
             + LGL  T F+   G  +    T                 A +    +  I     + 
Sbjct: 192 EMEKLGLEHTRFVEPSGYSELNLTTPREFAAFARTYVNRYPEALEKFHSARSIAYPQEKN 251

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           +  +             +TN  +G   G DG+KTGF   SG+N+  +A +G    +AV++
Sbjct: 252 LAPWHAGTGSQPPIVQQSTNKLLGVLPGCDGLKTGFIYESGYNLSLTAERGGTRFLAVMM 311

Query: 245 GALDRNT------RNKVSASLLSMGFYNKTDRKK-INYIIKDFYQQNLSNEVPNI 292
                 +      R K S +++   F     R       +        SN V  I
Sbjct: 312 RGPGSGSAEGNEYRVKDSTTMMEWAFGRFATRPADALEAVTVPVLGAASNAVTLI 366


>gi|271962810|ref|YP_003337006.1| D-alanyl-D-alanine carboxypeptidase [Streptosporangium roseum DSM
           43021]
 gi|270505985|gb|ACZ84263.1| D-alanyl-D-alanine carboxypeptidase [Streptosporangium roseum DSM
           43021]
          Length = 369

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 99/281 (35%), Gaps = 13/281 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                 +          Y + D  TG V+A   P   + PAS  K +TA  +        
Sbjct: 40  LVSPAGVKAPPKTAAKSYVVADAETGEVLAAKDPHGRYLPASTLKALTALTLIPK----- 94

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                 +  S  A     S          T+D+  K L++ S ND A+A+AE+     K 
Sbjct: 95  LDKDLKVKPSSRAVNEEGSAVGLVSKPIYTVDDLFKALMLVSGNDCAMALAEANGGLAKT 154

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  ++ L    T      G+ + G  ++A D+A+++     +   +  Y   K  
Sbjct: 155 LRD-MNTEAQRLQAFDTVAKTPSGLDKPGQSSSAYDLALIARAGLAN-DDFQRYISTKVD 212

Query: 194 EI----KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           +        +  N N  +  + G  G+K G+T  +  + V +A +   ++I  ++     
Sbjct: 213 KFPAPKGYYEIGNHNKLLWRYKGMIGVKNGWTSKALGSFVGAARRNGHTIIVSVMRHEGY 272

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
                  A LL  GF  +     +  ++            P
Sbjct: 273 F--WDEVADLLDWGFATRGKAVPVGRLVDPLPAPAPLPTGP 311


>gi|167760257|ref|ZP_02432384.1| hypothetical protein CLOSCI_02630 [Clostridium scindens ATCC 35704]
 gi|167662140|gb|EDS06270.1| hypothetical protein CLOSCI_02630 [Clostridium scindens ATCC 35704]
          Length = 475

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 106/269 (39%), Gaps = 17/269 (6%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++  TG ++     D    PAS+TK++TA V     + +     T  
Sbjct: 82  PQGPGTYGEAAIVMEVGTGAILYAKNIDSHQYPASITKVLTALVAMENGQLE--DPVTFS 139

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV----AIAESLCKTEKKFVQ 136
             S    +   S+   K+G+ ++L+ AL   ++ SAN+ A     ++  +       F++
Sbjct: 140 HDSVAFLKPGDSSVGLKEGNQISLEQALHATLLASANEAAYAVGESVGINAGHDYNWFME 199

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP-----QYMHYFQIK 191
            MN   + LG   ++F N +G+    HYT ARDMA++   +          Q ++Y    
Sbjct: 200 QMNIRCRELGGENSNFANTNGLHDENHYTCARDMALIGRELFKHPDFFRIVQTLNYAIPA 259

Query: 192 GLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              ++   +   +          +  A G KTGFT  +   ++  A  G   L+ V+L  
Sbjct: 260 SETVEEHIFQQKHKMLIPENSNYYPYAIGGKTGFTSDALSTLITMADNGGMQLVCVVLRT 319

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINY 275
              +     +A L    F N       +Y
Sbjct: 320 HGVHI-YPDTAGLFEYAFNNFGKVPVADY 347


>gi|229195572|ref|ZP_04322338.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
 gi|228587821|gb|EEK45873.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
          Length = 407

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 17/328 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEGKNVK 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKITK 335
           T  + A   +     + K       + +
Sbjct: 309 TTFRAATLDKDSL--YHKGIHRGEVVGE 334


>gi|229016624|ref|ZP_04173563.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
 gi|229022835|ref|ZP_04179357.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228738470|gb|EEL88944.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228744711|gb|EEL94774.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
          Length = 407

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 78/327 (23%), Positives = 132/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITRGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSTQTVSIFNKSTYFENPYSMGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 IYEDLKQMAEYSFGQFTKQTVLDKHSWHQKTTYLNKDVDSELEKSAELMLKKDEGKNVKT 309

Query: 309 QMKEAK-DKESHFIDFEKITLLKNKIT 334
             +    DKES    ++K       + 
Sbjct: 310 AFRVNSVDKESL---YQKGIHRGEVVG 333


>gi|118476851|ref|YP_894002.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416076|gb|ABK84495.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
          Length = 443

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 77/359 (21%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ L  I +  L                    + P           + T +D  TG ++ 
Sbjct: 20  KKILAFITVICLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 79

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 80  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 134

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 135 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 194

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 195 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGKT 253

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 254 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 312

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S E+   + E  N  T  + A   +     + K       + 
Sbjct: 313 HQKTTYLNKDIDSELEKSAELMLKKDEGKNVKTTFRAASLDKDSL--YHKGIHRGEVVG 369


>gi|302536388|ref|ZP_07288730.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. C]
 gi|302445283|gb|EFL17099.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. C]
          Length = 487

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 99/282 (35%), Gaps = 26/282 (9%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++        + + D  TG V+A +       PAS  K++ A  V             
Sbjct: 143 APALPANLSGRSWIVADAETGEVLAAHNAHWRLPPASTLKMLFADTVLP-----GLPKDQ 197

Query: 79  PITISKNASEYPPSNST---FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              ++    +     S+    K+    T+ +    + ++S ND    ++ ++     K V
Sbjct: 198 VHHVTDQDMDGVGPGSSLVGVKEDHDYTVHDLWLGVFLRSGNDAVHVLS-AMNGGIDKTV 256

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY-------- 187
           + M   ++ L    TH ++  G       ++A D+ +++           +         
Sbjct: 257 KDMQAHAEELQALDTHVVSPDGYDAPEQVSSAYDLTLIARSGLQKQDFREYCGTAEAKFP 316

Query: 188 -FQIKGLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             Q  G   +  +  NTN  +        + G  G+K G T  +G     +A +GD+ L+
Sbjct: 317 GRQEAGRPREYFEIQNTNRLMTGAGGIAPYKGIAGVKNGNTTMAGSTFTGAAQRGDKKLL 376

Query: 241 AVILGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
             ++   +   N   + +A L   GF      K +  ++   
Sbjct: 377 VTVMNPDNGGLNGVYEETAQLFDWGFAAAGKVKPVGELVPPK 418


>gi|291441236|ref|ZP_06580626.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344131|gb|EFE71087.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 385

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 15/260 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + + D  TG V+A +       PAS  K + A  V   L      L 
Sbjct: 45  AGAPEVPELSAKSWLVADAGTGTVLAAHDAHRRLPPASTLKTLFALTVLPALPAG---LR 101

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             ++        P S+      +     + L   +  S+ + AV +  SL    +   + 
Sbjct: 102 HEVSERDLRGIGPGSSLVGVAENRTYEVSDLWNGVFLSSGNDAVHVLASLGGGWRTTAER 161

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI----KGL 193
           M   +  LG   T   +  G    G  ++A D+A+       +     +  +      G 
Sbjct: 162 MEAKAHALGARDTRVESPDGYDAPGQVSSAFDLAVFGRAGLRNPEFARYCARTEARFPGR 221

Query: 194 EIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           +       NTN        V  + G  G+K G+T  +G  +VA+A Q  ++L+  ++   
Sbjct: 222 DGGSYGIRNTNRLLTGADGVEPYPGLIGIKNGYTSNAGHTLVAAARQDGRTLVVTVMHPR 281

Query: 248 DRNTR--NKVSASLLSMGFY 265
                   + + SLL  GF 
Sbjct: 282 SGGAHAVYEEARSLLDWGFE 301


>gi|239932885|ref|ZP_04689838.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 406

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 15/260 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + + D  TG V+A +       PAS  K + A  V   L      L 
Sbjct: 66  AGAPEVPELSAKSWLVADAGTGTVLAAHDAHRRLPPASTLKTLFALTVLPALPAG---LR 122

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             ++        P S+      +     + L   +  S+ + AV +  SL    +   + 
Sbjct: 123 HEVSERDLRGIGPGSSLVGVAENRTYEVSDLWNGVFLSSGNDAVHVLASLGGGWRTTAER 182

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI----KGL 193
           M   +  LG   T   +  G    G  ++A D+A+       +     +  +      G 
Sbjct: 183 MEAKAHALGARDTRVESPDGYDAPGQVSSAFDLAVFGRAGLRNPEFARYCARTEARFPGR 242

Query: 194 EIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           +       NTN        V  + G  G+K G+T  +G  +VA+A Q  ++L+  ++   
Sbjct: 243 DGGSYGIRNTNRLLTGADGVEPYPGLIGIKNGYTSNAGHTLVAAARQDGRTLVVTVMHPR 302

Query: 248 DRNTR--NKVSASLLSMGFY 265
                   + + SLL  GF 
Sbjct: 303 SGGAHAVYEEARSLLDWGFE 322


>gi|324325393|gb|ADY20653.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 428

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 78/360 (21%), Positives = 140/360 (38%), Gaps = 35/360 (9%)

Query: 1   MRQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVI 42
           +++ L  I +  L                    + P           + T +D  TG V+
Sbjct: 4   LKKILAFITVICLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDVL 63

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGS 100
            +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G 
Sbjct: 64  YDKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGE 118

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
           T+  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+  
Sbjct: 119 TINRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHD 178

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMK 217
             HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G K
Sbjct: 179 PNHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGK 237

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY-- 275
           TGFT  +   +V    +    +I V++ A  R    +    +    F     +  ++   
Sbjct: 238 TGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHS 296

Query: 276 -IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
              K  Y     +     S E+   + E  N  T  + A   +     + K       + 
Sbjct: 297 WHQKTTYLNKDIDSELEQSAELMLKKDEGKNVRTIFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|300215120|gb|ADJ79536.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           salivarius CECT 5713]
          Length = 384

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 139/363 (38%), Gaps = 35/363 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + +L+++ + +       +     A+        ++D  TG V+ +   +  +  ASLTK
Sbjct: 6   KNWLILVMLGIAIITGSGIMRGVEADKIDAKAAYMIDAGTGQVLYQQNANSKYPIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           ++T  V+   +  +K      I     +S  A+ +  SN    +G + T+ + ++ +++ 
Sbjct: 66  ILTLAVIMKDIHNQKLSWDQKIKVNKDVSDMANNWQYSNVQLNEGESYTVKSLVESMMIV 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------Q 160
           SA+    A+A +   + K F + M   +   G++     N  G+                
Sbjct: 126 SADGSTEALALADAGSVKAFNEKMKEVAHEAGVTDAEIYNMIGLPNSDLGNLKLKNVGDD 185

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--------- 211
             +  +A+D+A++S  +  ++P+ +   + K ++ K       N     ++         
Sbjct: 186 QENKFSAKDIALISKYLVNNYPEVIDITKQKNVDFKISADQTYNMENINYMLEGSYAAPK 245

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTGFT  +G+  V +     Q +I VIL A D N +   +  ++     N   
Sbjct: 246 NGTIDGLKTGFTDEAGYCFVGTGTFNGQRVITVILNASDYNKQFAETNKIIESVMNN--- 302

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            K +N       +Q L  E   +++      K       + K     E       K   +
Sbjct: 303 DKVVNTKDIKSVKQALKKENLKVNDTNIWVTKNTDPKQIKAKLTLSNEKIKAKNTKNEKV 362

Query: 330 KNK 332
              
Sbjct: 363 GTI 365


>gi|228951756|ref|ZP_04113856.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228957645|ref|ZP_04119393.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229043115|ref|ZP_04190843.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|229068926|ref|ZP_04202220.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|229078559|ref|ZP_04211118.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|229108831|ref|ZP_04238436.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|229126691|ref|ZP_04255703.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|228656631|gb|EEL12457.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|228674600|gb|EEL29839.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|228704784|gb|EEL57211.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228714210|gb|EEL66091.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|228726254|gb|EEL77483.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|228802030|gb|EEM48899.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228807926|gb|EEM54445.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 405

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 14  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAYPASTTKVLTAILLMEHTK----- 68

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 69  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 128

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 129 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 188

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I+V++ A  R  
Sbjct: 189 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIISVVM-ASQRPE 247

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 248 IYEDLKQMAEYSFGQFTKQMVLDKHNWHQKTTYLNKDVNSELEQSAELMLKKDEGKNVKT 307

Query: 309 QMKEAK 314
             + A 
Sbjct: 308 IFRAAS 313


>gi|206968269|ref|ZP_03229225.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|206737189|gb|EDZ54336.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
          Length = 428

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 78/338 (23%), Positives = 132/338 (39%), Gaps = 31/338 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ LV I +                       + P  +        + T +D  TG V+ 
Sbjct: 5   KKILVFITVICSFFLTPITLRAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDVLY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAYHRAFPASTTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNEKAKQLGAKDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
            HYTT  DMA+++   +   +  Q M+  +      +                + G KTG
Sbjct: 180 NHYTTPYDMAMITKGVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSNFFENPYSIGGKTG 239

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---I 276
           FT  +   +V    +    +I+V++ A  R    +    +    F   T +  ++     
Sbjct: 240 FTNEARNTLVLLNEKDGNRIISVVM-ASQRPEIYEDLKQMAEYSFGQFTKQMVLDKHNWH 298

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
            K  Y     N     S E+   + E  N  T  + A 
Sbjct: 299 QKTTYLNKDVNSELEQSAELMLKKDEGKNVKTIFRAAS 336


>gi|238855155|ref|ZP_04645477.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           269-3]
 gi|260665532|ref|ZP_05866378.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932568|ref|ZP_06337990.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           208-1]
 gi|313473146|ref|ZP_07813630.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus jensenii 1153]
 gi|238832236|gb|EEQ24551.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           269-3]
 gi|239528609|gb|EEQ67610.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus jensenii 1153]
 gi|260560653|gb|EEX26631.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus jensenii
           SJ-7A-US]
 gi|281303316|gb|EFA95496.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           208-1]
          Length = 422

 Score =  130 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 125/382 (32%), Gaps = 53/382 (13%)

Query: 1   MRQFLVII-----------------AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           M++F   I                  +   ++I    +      +     +D  TG V+ 
Sbjct: 1   MKRFFKTIICLLSFLLISSLALTGGTVFASTSINNVNANEAKLNVKAAITIDQKTGEVLY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKG 99
                     AS++KL+T Y+    +K  K      +T +KN     +    SN   ++ 
Sbjct: 61  AKNAAKALPIASMSKLITIYLTLQAIKNGKLSWNQKLTPTKNIVKLSNNSDYSNVPLQEK 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
              T+    +  +++SAN   + +A+++  +++  V  M    K   ++        G+ 
Sbjct: 121 HQYTVKQLYEASLIESANGAVMMLAQAVYGSQENAVNQMRTLLKKWQINGAQIYTTCGLK 180

Query: 160 QHGHYTTAR--------------DMAILSWRIKTDFPQYMHYFQIKGLEIKG----KKYP 201
                + A                +A +   + TD+P+ +   ++  L+ K      K  
Sbjct: 181 NGEVGSDAYPGAGKNVENEVPAVGVAKIVDHLLTDYPEVLSTSKLAELDFKDGSTVTKMK 240

Query: 202 NTNWAVGTFLGA------DGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNT 251
           N NW +            DG+KTG +  +G     +     + LI +++GA        +
Sbjct: 241 NWNWMLKGLSQYDSEYPLDGLKTGTSEKAGACFAGTLKYKGRRLITIVMGAKHVDGTDPS 300

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           R   +  +L   + N           +    + +     N        +K+   +     
Sbjct: 301 RFVQTKKMLDYVYSNYQLY-IYKKGTQLANLKGVKVADGNQKISNLVVKKDSGIWQKTSS 359

Query: 312 EAK---DKESHFIDFEKITLLK 330
             K    K       +K  L  
Sbjct: 360 TGKLTFSKSEIEAPIKKGQLAG 381


>gi|42518607|ref|NP_964537.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus johnsonii NCC
           533]
 gi|41582892|gb|AAS08503.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus johnsonii NCC
           533]
          Length = 308

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 35/299 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           +++L +I++ + +  F                 +      +     ++   G  I     
Sbjct: 10  KKYLWLISLVIAAICFFVWKNNFNSNRMPANYHADQVDLNVKAAVAINAKDGSTIYAKNA 69

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +     AS+TKL+T Y+    +KEKK    T +T ++   +   +         +     
Sbjct: 70  NQSLPIASMTKLLTVYLTLQAIKEKKISWDTTVTPTQEIVDLGSNPDYASVPLRLGQKYT 129

Query: 108 LKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-- 161
           ++ L      KSAN+ A  +A ++  +E  F+  M   ++   L+   F+   G+ +   
Sbjct: 130 VRELYDAALIKSANNAARLLAIAVSGSETNFLNQMRQQARKWKLNNAKFVTVDGLPEKKK 189

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                     +  +A DMAI++ ++ T++P+ ++  ++     +     N+N  +     
Sbjct: 190 NFLGMTTTVENKMSANDMAIVARKLITNYPEILNTTKLARAYFQNTLMTNSNKMLNGLSY 249

Query: 213 ------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                  DG+KTG T  +G     +  +  + +I VILGA + N R   +  LLS  F 
Sbjct: 250 YDSTFPVDGLKTGTTDGAGSCFTCTVNKNGKRVITVILGAENDNERFVETKKLLSYCFN 308


>gi|293397160|ref|ZP_06641434.1| penicillin-binding protein 7 [Serratia odorifera DSM 4582]
 gi|291420631|gb|EFE93886.1| penicillin-binding protein 7 [Serratia odorifera DSM 4582]
          Length = 307

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 106/281 (37%), Gaps = 23/281 (8%)

Query: 1   MRQFLVIIAMAMLSN-------------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYP 47
           M+  ++++ +  L +                  +           ++D ++  V+    P
Sbjct: 1   MKIRVLVLTLLALQSGVGLAPRALASESATALHATQPELASGSAMVVDMSSHKVLYARNP 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D     AS+TKLMTA V          MLT  I  +          S  +  S ++  + 
Sbjct: 61  DEVVPIASITKLMTAMVTLDAHLPLDEMLTVDIHQTPE---MKGVYSRVRLNSEISRKDM 117

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L L ++ S N  A ++A         F+  MN  +K LG++ TH++   G+    + +TA
Sbjct: 118 LLLALMSSENRAAASLAHHYPGGYNAFISAMNAKAKALGMTRTHYVEPTGL-SIHNVSTA 176

Query: 168 RDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFT 221
           RD++ L      + +                      + NTN  V          KTGFT
Sbjct: 177 RDLSKLLLATKQYPLIGQLSTTTERMASFKDPNYTLPFRNTNHLVYNPKWNIQLTKTGFT 236

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +    + G++S+  V+L A  + T    ++ L S 
Sbjct: 237 NQAGHCLAMRTMIGNRSVSLVVLDAFGKYTHFADASRLRSW 277


>gi|217965981|ref|YP_002351659.1| beta-lactamase [Listeria monocytogenes HCC23]
 gi|217335251|gb|ACK41045.1| beta-lactamase [Listeria monocytogenes HCC23]
 gi|307572402|emb|CAR85581.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria
           monocytogenes L99]
          Length = 272

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA+++   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGKPLYEQNADKVMPIASLSKLMTAFLILEAVDNNELSWDETLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MN  +  L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYNAMLTMSANDAAETLG--DRLDGADFPKEMNRQATKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T+F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSRTNFVSASGLDVDGKTAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDEGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|229183569|ref|ZP_04310793.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228599979|gb|EEK57575.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
          Length = 407

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 15/301 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEGKNVK 308

Query: 308 T 308
           T
Sbjct: 309 T 309


>gi|256852167|ref|ZP_05557553.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus jensenii
           27-2-CHN]
 gi|260661800|ref|ZP_05862711.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus jensenii
           115-3-CHN]
 gi|282933532|ref|ZP_06338903.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           208-1]
 gi|297205668|ref|ZP_06923064.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus jensenii
           JV-V16]
 gi|256615213|gb|EEU20404.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus jensenii
           27-2-CHN]
 gi|260547547|gb|EEX23526.1| d-alanyl-d-alanine carboxypeptidase [Lactobacillus jensenii
           115-3-CHN]
 gi|281302346|gb|EFA94577.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           208-1]
 gi|297150246|gb|EFH30543.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus jensenii
           JV-V16]
          Length = 422

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 130/382 (34%), Gaps = 53/382 (13%)

Query: 1   MRQFLVII-----------------AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           M++F   I                  ++  ++I    +      +     +D  TG V+ 
Sbjct: 1   MKRFFKAIICLLSFLLVSSLALTAGTVSASTSINNINADEVNLDVKAAITIDKKTGEVLY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKG 99
                     AS++KL+T Y+    +K+ K      +T +KN     +    SN   ++ 
Sbjct: 61  AKNAAQALPIASMSKLITIYLTLQAIKDGKLSWNQKLTPTKNIVKLSNNSDYSNVPLQEK 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
              T+    +  +++SAN   + +A+++  +++  V  M    K   ++        G+ 
Sbjct: 121 HQYTVKQLYEASLIESANGAVMMLAQAVYGSQENAVNQMRTLLKKWNITDAQIYTTCGLK 180

Query: 160 QHGHYTTAR--------------DMAILSWRIKTDFPQYMHYFQIKGLEIKG----KKYP 201
                + A                +A +   + TD+P+ ++  ++  L+ K      K  
Sbjct: 181 NGEVGSDAYPGAGKNVENEIPAVGVAKIVDHLLTDYPEILNTSKLAELDFKDGSTVTKMQ 240

Query: 202 NTNWAVG---TFLGAD---GMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNT 251
           N NW +     +  A    G+KTG +  +G     +     + LI +++GA        +
Sbjct: 241 NWNWMLKGLSQYDSAYPLDGLKTGTSEKAGACFAGTLKYKGRRLITIVMGAKHADGTDPS 300

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           R   +  +L   + N           +    + +     N        +K+   +     
Sbjct: 301 RFTQTKKMLDYVYNNYQLY-IYKKGTQLTNLKGIKVNDGNQKIANLVVKKDTGIWQKTSS 359

Query: 312 EAK---DKESHFIDFEKITLLK 330
             K    K +     +K  L  
Sbjct: 360 TGKLAFSKSAIEAPIKKGQLAG 381


>gi|304385702|ref|ZP_07368046.1| serine-type D-Ala-D-Ala carboxypeptidase [Pediococcus acidilactici
           DSM 20284]
 gi|304328206|gb|EFL95428.1| serine-type D-Ala-D-Ala carboxypeptidase [Pediococcus acidilactici
           DSM 20284]
          Length = 415

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 144/369 (39%), Gaps = 41/369 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L++IA  +L       + A                   +D+ TG V+ E + D   
Sbjct: 1   MKKVLLVIATLLLFATGVTPAAAATQTSSLVNPEITAKSALAIDSETGQVLYEKHADQVL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNA 107
             AS++K+++AY++   ++  K     P+ I+ + ++   +    N     G + T+ N 
Sbjct: 61  PIASMSKVLSAYLIMKSVQSGKMRWDQPVKINADIAKISENSELTNVPLTAGKSYTVKNL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------- 158
           L   ++ SAN   +A+ ++   + +KFV  M  T ++ G+      NA G+         
Sbjct: 121 LDASLIYSANAAIIALGKAQAGSSRKFVDKMRATVRSWGIKDAKLYNAAGLLENQVGAEK 180

Query: 159 -----VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTN---WA 206
                    +  +A DMA++   +  +FP+ +   +I+ L+           N N     
Sbjct: 181 YPNSPKNAENQMSANDMAVVIQHVLKEFPEILQITKIQKLDFDTGSGKVTMINHNELLPG 240

Query: 207 VGTFLGAD---GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
              +       G+KTG + A+G +  A+     + +I+V+LGA   + R   + ++    
Sbjct: 241 GAQYDHQYQLDGLKTGTSLAAGEDFAATGKVNQRRIISVVLGAKT-DQRFTDTKAIWQAL 299

Query: 264 FYNKTDRKKINYIIKDFYQ--QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES-HF 320
             N T  K                      +++ +   + +      ++ + K K +   
Sbjct: 300 MTNLTVVKTNLKNQASVVMDSAKQRQVKLQLAQPLAYWKAKKGGQMPKLDQVKLKSAKTK 359

Query: 321 IDFEKITLL 329
              +K  ++
Sbjct: 360 APVDKNQVI 368


>gi|229143980|ref|ZP_04272397.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|228639543|gb|EEK95956.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
          Length = 405

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 14  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAYPASTTKVLTAILLMEHTK----- 68

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 69  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 128

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 129 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 188

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I+V++ A  R  
Sbjct: 189 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIISVVM-ASQRPE 247

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 248 IYEDLKQMAEYSFGQFTKQMVLDKHNWHQKTTYLNKDVNSELEQSAELMLKKDEGKNVKT 307

Query: 309 QMKEAK 314
             + A 
Sbjct: 308 IFRAAS 313


>gi|320008978|gb|ADW03828.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 420

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 96/289 (33%), Gaps = 19/289 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D   G V+A +       PAS  K++ A  V   L+ K   LT 
Sbjct: 65  APVLPKDLSARSWIVADAEDGQVLASHNAHWRLPPASTLKMLFADTVLPALQPK--TLTH 122

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T  + +     S+    K       + L L +   + + AV +   +       V  M
Sbjct: 123 LVTEDELSGVGEGSSLVGVKEDHSYTVHDLWLGVFLRSGNDAVHVLSEMYGGVPATVAAM 182

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ--------- 189
              ++ L    T  ++  G       ++A D+ + +           +            
Sbjct: 183 QRHAEELQALDTTVVSPDGYDAPRQVSSAYDLTLFARSGMQKADFREYAATATAEFPGEV 242

Query: 190 IKGLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            KG + K  +  NTN  +        + G  G+K G+T  +G      A +  + L+  +
Sbjct: 243 KKGKKRKSFEIQNTNRLITGDIGVEPYKGIAGVKNGYTTHAGNTFTGIAERDGRVLLVTV 302

Query: 244 LGALDRNTR--NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           +      +    K +A+LL  GF        +  ++            P
Sbjct: 303 MNPSSEESHAVYKEAAALLDWGFAASGKVTPVGELVPPKSAVVSKGSEP 351


>gi|324326527|gb|ADY21787.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 338

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F ++    +++ +    F         +     L+D+N+  VI +   + P   A+L
Sbjct: 4   LKKFAILFLSFVITTLIVLYFYLYVNGPIIQAKSAILIDSNSSEVIYKKNEEIPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L E K  L   + IS        S          T+ + L  L +   
Sbjct: 64  SKLMTEYIVMEKLNEGKIQLDELVKISNEVFRAETSPIQATSKDKTTVRDLLHALFLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L LS      NA G+    +    TTA D+A 
Sbjct: 124 NRSALALAEHIAGNEDNFTLLMNEKAKQLKLSQPSPFLNATGMNNDTNKQSTTTAIDVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCAS 224
           L+ ++ TDFP  ++  ++          K  NTN  +          G DG++T F    
Sbjct: 184 LATQLVTDFPDVLNITKLTSYQFTFNDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFLING 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V +A +GD  LI+VIL + + N+    +  LL  GF 
Sbjct: 244 NYSFVGTAKRGDTRLISVILDSNEENSTFIETKKLLQYGFD 284


>gi|229172016|ref|ZP_04299581.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
 gi|228611359|gb|EEK68616.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
          Length = 407

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 75/327 (22%), Positives = 131/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+      H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDVLYNKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +    + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGNVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FAHMMNEKAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +       + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSSQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKATYLNKDIDSELEKSAELMLKKDEGKNVR 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TIFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|229133606|ref|ZP_04262433.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228650006|gb|EEL06014.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
          Length = 338

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +    TL+DTN+G ++ +   + P   A+L+KLMT Y
Sbjct: 11  LLSFLITALIVLYFYLYVNGPIIQAKSATLIDTNSGEIVYKKNEETPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +    L E K  L   + IS        S          T+ + L  L +   N  A+A+
Sbjct: 71  IALEQLNEGKIQLDELVKISNEVFRAETSPIQVTSKDKTTVRDLLHALFLTGNNRSALAL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN+ +K L LS      NA G+    +    TT+ D+A L+ ++  
Sbjct: 131 AEHIAGNEDNFTLLMNDKAKQLKLSQPSPFLNATGINNDTNKQSTTTSIDVAKLATQLVK 190

Query: 180 DFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFNIVAS 231
           DFP  ++  ++       K  K  NTN  +          G DG++T F+    ++ V++
Sbjct: 191 DFPDVLNVTKLTSYQFTFKDSKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNGNYSFVST 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A +GD  LI+VIL A D N+    +  LL  GF 
Sbjct: 251 ATRGDTRLISVILDAGDENSTFIETKKLLQYGFD 284


>gi|229149576|ref|ZP_04277808.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
 gi|228633922|gb|EEK90519.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
          Length = 405

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 14  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAYPASTTKVLTAILLMEHTK----- 68

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 69  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 128

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 129 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 188

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I+V++ A  R  
Sbjct: 189 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIISVVM-ASQRPE 247

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 248 IYEDLKQMAEYSFGQFTKQMVLDKHNWHQKTTYLNKDVNSELEQSAELMLKKDEGKNVKT 307

Query: 309 QMKEAK 314
             + A 
Sbjct: 308 IFRAAS 313


>gi|49477173|ref|YP_035504.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196035444|ref|ZP_03102849.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|196046527|ref|ZP_03113752.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
 gi|225863238|ref|YP_002748616.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB102]
 gi|49328729|gb|AAT59375.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|195992121|gb|EDX56084.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|196022711|gb|EDX61393.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
 gi|225788080|gb|ACO28297.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 03BB102]
          Length = 428

 Score =  129 bits (324), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 77/359 (21%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ L  I +  L                    + P           + T +D  TG ++ 
Sbjct: 5   KKILAFITVICLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    +I V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S E+   + E  N  T  + A   +     + K       + 
Sbjct: 298 HQKTTYLNKDIDSELEKSAELMLKKDEGKNVKTTFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|168215602|ref|ZP_02641227.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens NCTC 8239]
 gi|182382030|gb|EDT79509.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 423

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 127/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F                    Y   LD +TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFTPTKATVQAAEISQPNIVGKYAVTLDYDTGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T    ++       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKAQQPYTLNNSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ +  + +KF   MN+  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGVAGSAEKFSVMMNDEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVSETMALKDSDITVNGKKVLLENRNKELGI-DGNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGAVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|218902481|ref|YP_002450315.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|218536407|gb|ACK88805.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
          Length = 428

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 76/359 (21%), Positives = 139/359 (38%), Gaps = 35/359 (9%)

Query: 2   RQFLVIIAMAMLSN------------------IFPFLSIAETNKLPYYTLLDTNTGHVIA 43
           ++ L  I +  L                    + P           + T +D  TG ++ 
Sbjct: 5   KKILAFITVICLFFLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDILY 64

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGST 101
           +    H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T
Sbjct: 65  DKNAHHRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGET 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +  + AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+   
Sbjct: 120 INRNTALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDP 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKT 218
            HYTT  DMA+++      +P+ +     K   +   +   + +   T+     + G KT
Sbjct: 180 NHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPYSIGGKT 238

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY--- 275
           GFT  +   +V    +    ++ V++ A  R    +    +    F     +  ++    
Sbjct: 239 GFTNEARNTLVLLNEKDGNRIVNVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSW 297

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
             K  Y     +     S E+   + E  N  T  + A   +     + K       + 
Sbjct: 298 HQKTTYLNKDIDSELEKSAELMLKKDEGKNVKTTFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|295101851|emb|CBK99396.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           L2-6]
          Length = 429

 Score =  129 bits (324), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 75/348 (21%), Positives = 128/348 (36%), Gaps = 18/348 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++++  A+       + I   +      L + +TG  I     D     ASLTK+MTA 
Sbjct: 17  LVLMVCAALPGFAAYQMPIQTASDTESVYLFNLDTGKPILRQNSDQQRYIASLTKMMTAL 76

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +     K+  A +T P ++++   +      S    + G T+   + L  L+V SAND A
Sbjct: 77  LFLESGKDMNAEITIPTSLTQEFKDIQNANGSTMNLRIGETVRRIDLLYGLLVASANDAA 136

Query: 121 -VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            V  ++        FV  MN  +K LG + T F   HG+  +G+ +TA D+A ++     
Sbjct: 137 SVIASDVSGGDLTAFVAQMNARAKELGCTDTTFSCVHGLYDYGNVSTAEDLAKIAAACYA 196

Query: 180 DFPQYMHYFQIKGL------EIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNI 228
           +         +             +   +TN               GMKTGFT  +G   
Sbjct: 197 NETYMQAANTLTYTLPATNLHQNERTIKSTNLMLDPEYAYHRDYVRGMKTGFTTLAGRCF 256

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI--NYIIKDFYQQNLS 286
           V  A Q   +   V+LG+ D N   +  A +L   F + +DR+ +    ++         
Sbjct: 257 VTFAQQDGHTYGLVVLGS-DMNNIYRECAEILDWAFSSFSDRQLVDTETVLTTVPLTKCR 315

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            E                  +    E    ES     ++  +L     
Sbjct: 316 TEEAVELYAASGLSGYGHADDEVTFEFSVPESTSATVKEGAVLGTATV 363


>gi|110801081|ref|YP_696655.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens ATCC 13124]
 gi|110675728|gb|ABG84715.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens ATCC 13124]
          Length = 423

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 127/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F                    Y   LD +TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFTPTKATVQAAEISQPNIVGKYAVTLDYDTGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T    ++       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKAQQPYTLNNSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ L  + +KF   MN+  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGLAGSAEKFSVMMNDEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVSETMALKDSDITVNGKKVLLENRNKELGI-DGNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGAVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|295103732|emb|CBL01276.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 430

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 70/347 (20%), Positives = 127/347 (36%), Gaps = 16/347 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             V ++  +       + +    +     L + +TG  I     D     ASLTKLMTA 
Sbjct: 17  LAVAVSAVLPVFAVYPMPVQTATETEAVYLFNADTGKTILSQNADQQKYVASLTKLMTAL 76

Query: 64  VVFSFLKE---KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++    K+   +  + T      K+      +    + G T+   + L  +++ SAND A
Sbjct: 77  LLVESGKDLNGEVTVPTDLTQEFKDIQNANGTTMGLRIGETVRRIDLLNAMLIISANDAA 136

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
             IA  +  +   FVQ MN  +  LG + T+F  AHG+  +G+ +TA+D+A ++     +
Sbjct: 137 SVIAWDVGGSVVGFVQQMNARAAELGCTGTNFTCAHGLFDYGNVSTAQDLAKIAAACAEN 196

Query: 181 FPQY----MHYFQIKGLEIKGKKYPN------TNWAVGTF-LGADGMKTGFTCASGFNIV 229
                      + +    ++  +Y         N     +      +K GFT  +G  IV
Sbjct: 197 QTFAQVAGTASYVLPATNLRKAEYTISSSNSLMNSESANYREYVKWVKGGFTTLAGRCIV 256

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN-YIIKDFYQQNLSNE 288
           A A Q   +   VILG    +        L    F +  DR  ++   +      N    
Sbjct: 257 AFAQQDGHNYGLVILGCDTPDHLFTACDDLFDWAFASFADRPLVDTKTVLTTVDLNKCRT 316

Query: 289 VPNISEEVCTTQKEIINYNTQMKEA-KDKESHFIDFEKITLLKNKIT 334
            P +            + + ++  +    ES     ++   L     
Sbjct: 317 EPAVELYAAAPVSGYGHSDDKVSYSFDLPESVSATVKEGQKLGTATV 363


>gi|90962503|ref|YP_536419.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           salivarius UCC118]
 gi|90821697|gb|ABE00336.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           salivarius UCC118]
          Length = 384

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 138/363 (38%), Gaps = 35/363 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + +L+++ + +       +     A+        ++D  TG V+ +   +  +  ASLTK
Sbjct: 6   KNWLILVMLGIAIITGSGIIRGVEADKIDAKAAYMIDAGTGQVLYQQNANSKYPIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           ++T  V+   +  +K      I     +S  A+ +  SN    +G + T+ + ++ +++ 
Sbjct: 66  ILTLAVIMKDIHNQKLSWNQKIKVNKDVSDMANNWQYSNVQLNEGESYTVKSLVESMMIV 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------Q 160
           SA+    A+A     + + F + M   +   G++     N  G+                
Sbjct: 126 SADGSTEALALVDAGSVQAFNEKMKEVAHEAGVTDAEIYNMIGLPNSDLGNLKLKNVGDD 185

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--------- 211
             +  +A+D+A++S  +  ++P+ +   + K ++ K       N     ++         
Sbjct: 186 QENKFSAKDIALISKYLVNNYPEVIDITKQKNVDFKISADQTYNMENINYMLEGSYAAPK 245

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTGFT  +G+  V +     Q +I VIL A D N +   +  ++     N   
Sbjct: 246 NGTIDGLKTGFTDEAGYCFVGTGTFNGQRVITVILNASDYNKQFSETNKMIESVMNN--- 302

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            K +N       +Q L  E   +++      K       + K     E       K   +
Sbjct: 303 DKVVNTKDIKSVKQALKKEKLKVNDTNIWVTKNTDPKQIKAKLTLSNEKIKAKNAKNEKV 362

Query: 330 KNK 332
              
Sbjct: 363 GTI 365


>gi|116334615|ref|YP_796142.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
 gi|116099962|gb|ABJ65111.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
          Length = 439

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 134/365 (36%), Gaps = 41/365 (11%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
              +   + ++     S     +      +D  TG ++ +   D     AS+TKL++ Y+
Sbjct: 22  FSTLGTTVTAHAASTNSTTVNLQAKAGIAVDAKTGQILYDKNSDQSLPVASMTKLLSVYL 81

Query: 65  VFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           V   + + K      IT++K           SN   + G + T+ +  +  ++ SAN   
Sbjct: 82  VLDAIHDGKLKWDQKITVNKATAKVAQNTNLSNVPLRAGHSYTVKSLYQASLIYSANGAI 141

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTT 166
            A+  ++  +   FV  M   +K LG++     NA G+                  +  +
Sbjct: 142 EALGTAVAGSPHAFVTKMRAEAKTLGMTNAKIYNACGLTNKQVGKLGYSNVKGSTENEWS 201

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWA------VGTFLGADG 215
           A D A L+  +   +P+ +    IK +          K  N NW         + L  DG
Sbjct: 202 AADQAKLAVALVNKYPEVLKTTSIKKMWFEKGTSDATKMENWNWMLKGLSASYSKLHVDG 261

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYNKTDRK 271
           +KTG + A+G N   +A      +I V+L A         R K +  ++S  + N     
Sbjct: 262 LKTGTSDAAGANFTGTANNNGNRIITVVLHAAHKSDTDPARFKQTQKMMSYVYNNFKTVT 321

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
                      Q   ++     +    T K  +    ++    D+ +  +     T LK+
Sbjct: 322 Y------KAGSQITGSKTVKTHDAKQLTAKTALASGIKLWIRDDQVASNV--HSTTQLKS 373

Query: 332 KITKK 336
           K+T K
Sbjct: 374 KLTTK 378


>gi|229138063|ref|ZP_04266661.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
 gi|228645408|gb|EEL01642.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
          Length = 407

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 75/327 (22%), Positives = 132/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +    +     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSIYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S EV   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAEVMLKKDEGKNVR 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TIFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|269836472|ref|YP_003318700.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphaerobacter
           thermophilus DSM 20745]
 gi|269785735|gb|ACZ37878.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphaerobacter
           thermophilus DSM 20745]
          Length = 550

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 74/322 (22%), Positives = 126/322 (39%), Gaps = 19/322 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +               +  ++  +TG V+ +   D    PASLTK+ TA V         
Sbjct: 28  TGAVVAADSPPDIAAAHAVVVSADTGEVLFDKGMDAETAPASLTKIFTAAVALETAP--- 84

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   ITI+++      S      G  +TL   L  +++ S ND A+AIA  L +    
Sbjct: 85  --LDQLITIAED-DLVGESAMGLVVGQDVTLRTLLYGMMLPSGNDAAMAIARGLSELSDG 141

Query: 134 --------FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
                   F++ +N+ ++ LGL+ T  +N HG+ + GH ++ARD+A ++     + P++ 
Sbjct: 142 SSGESIAPFMERVNDLAQRLGLTHTRLVNPHGLDEPGHVSSARDIAAITMYALGN-PEFR 200

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                     +G +  N N  + ++ G  G KTG T  +G+ +V  A +   ++IAV+LG
Sbjct: 201 RIIGSPYYVDEGFELYNNNELLTSYTGLIGGKTGITDEAGYCLVEVAQRDGHTIIAVVLG 260

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
           +   +     + SLL  GF                           ++  V T   E   
Sbjct: 261 S-TIDDWYTDAISLLDYGFA---TLAAAPSDPARPRITLAPATPAVVTPTVQTPSTEGSA 316

Query: 306 YNTQMKEAKDKESHFIDFEKIT 327
                        H  D E   
Sbjct: 317 LTVDRVADTTAVVHAADAEPGG 338


>gi|168208677|ref|ZP_02634302.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170713013|gb|EDT25195.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 423

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 127/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F                    Y   LD +TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFTPTKATVQAAEISQPNIVGKYAVTLDYDTGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T    ++       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKAQQPYTLNNSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ L  + +KF   MN+  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGLAGSAEKFSVMMNDEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVSETMALKDSDITVNGKKVLLENRNKELGI-DGNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGAVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|302035815|ref|YP_003796137.1| putative d-alanyl-D-alanine carboxypeptidase [Candidatus Nitrospira
           defluvii]
 gi|300603879|emb|CBK40211.1| putative D-alanyl-D-alanine carboxypeptidase [Candidatus Nitrospira
           defluvii]
          Length = 309

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 13/245 (5%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L +  TG  + +   +   +PASLTK+M+A V+  +       L   +T+S  
Sbjct: 63  VPAHSILLKELKTGTTLYQFESEKRLSPASLTKIMSALVILEY-----GHLDDEVTVSPK 117

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A+    ++   + G    L++ LK +++ SAND  +A +E +   E +FV  MN  +  L
Sbjct: 118 AARAHKTHLRLRTGQIFRLEDLLKAMLIVSANDACLAASEHVGGDEARFVDLMNAKAAAL 177

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKY 200
            L  THF NA G     HY+TA D+A LS             +      +   E +    
Sbjct: 178 QLHNTHFSNACGFDAPEHYSTAEDLAKLSEIALHHPVFKELVREEREIIMPINEHRAYVL 237

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
             TN  +G   G  G+KTGFT  +G  ++A   Q    L+ VIL +     R   + SL+
Sbjct: 238 RTTNRLLGRIPGVQGVKTGFTSKAGRCLIAKVSQDGSDLLLVILNS---KRRWNTATSLI 294

Query: 261 SMGFY 265
           + G  
Sbjct: 295 NYGLR 299


>gi|317047420|ref|YP_004115068.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pantoea sp.
           At-9b]
 gi|316949037|gb|ADU68512.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pantoea sp.
           At-9b]
          Length = 317

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 96/249 (38%), Gaps = 10/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                        ++D + G V+  ++PD     ASLTKLMTA VV          L   
Sbjct: 38  PVAQPQIASGSAMIVDLDNGKVLFSSHPDRVRPIASLTKLMTAMVVLDAK----LPLDEM 93

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +++   + +E     S  K  S ++  N L L ++ S N  A ++A         F++ M
Sbjct: 94  LSVDISHTAEMRGVFSRVKLNSEISRRNMLLLALMSSENRAAASLAHHYPGGYDAFIRAM 153

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG++ TH++   G+  H   +    + ++    +      +   +         
Sbjct: 154 NAKARALGMTHTHYVEPTGLSIHNVSSAEDLIKLVKATRQYPLIGQLSTTKEDTAVFTHP 213

Query: 199 KY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            Y     NTN  V          KTG+T  +G  +V   +  ++ +  V+L A  + T  
Sbjct: 214 SYALPFRNTNHLVYKNDWRIQLTKTGYTDEAGHCLVMRTVINNRPVALVVLDAFGKYTHF 273

Query: 254 KVSASLLSM 262
             +  L   
Sbjct: 274 ADANRLRDW 282


>gi|110803688|ref|YP_699253.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens SM101]
 gi|110684189|gb|ABG87559.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens SM101]
          Length = 423

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 126/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F  +                 Y   LD  TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFAPIKATVQAAEISQPNIVGKYAVTLDYETGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T     +       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKVQQPYTLNDSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ +  + +KF   MN+  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGVAGSTEKFSVMMNDEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVRETMALKDSDITVNGKKVLLENRNKELGIN-GNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGTVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|18310958|ref|NP_562892.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens str.
           13]
 gi|168212989|ref|ZP_02638614.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|182624439|ref|ZP_02952223.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|18145640|dbj|BAB81682.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens str.
           13]
 gi|170715489|gb|EDT27671.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|177910442|gb|EDT72819.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens D str. JGS1721]
          Length = 423

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 127/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F                    Y   LD +TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFTPTKATVQAAEISQPNIVGKYAVTLDYDTGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T    ++       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKAQQPYTLNNSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ +  + +KF   MN+  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGVAGSAEKFSVMMNDEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVSETMALKDSDITVNGKKVLLENRNKELGI-DGNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGAVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|255320984|ref|ZP_05362157.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter radioresistens
           SK82]
 gi|255301948|gb|EET81192.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter radioresistens
           SK82]
          Length = 330

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 97/253 (38%), Gaps = 14/253 (5%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF--LKEKKA 74
                   +       ++D  TG V+     +     AS+TKLMTA V         ++ 
Sbjct: 77  STSYVNQPSVNARAALVMDAQTGEVLFSKNTNTALPIASITKLMTAVVTSDARLNMSEEI 136

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L     I         ++ST + G  M     L   ++KS N  A A+A +    +  F
Sbjct: 137 TLQPIDFIGPK-----KASSTLRAGDKMNRAEVLLFALMKSENPAAAALARTYPGGKPAF 191

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  ++ LG+ +  F  + G+    +  +ARD+ IL     + +     +      +
Sbjct: 192 VAAMNAKARELGMHSAKFYESTGLDA-RNVASARDLGILVS-AASQYGLIRQFSTTPTYD 249

Query: 195 IKGK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                   K  NTN  V       +  KTGF   +G  +V  A    +  I V+LGA D 
Sbjct: 250 FNLGYRVLKSNNTNALVRNGGWNINLSKTGFINEAGRCVVMHATVNQRPAIVVLLGASDT 309

Query: 250 NTRNKVSASLLSM 262
            +RN  +  L S 
Sbjct: 310 QSRNNDATRLFSW 322


>gi|262278233|ref|ZP_06056018.1| D-Ala-D-Ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262258584|gb|EEY77317.1| D-Ala-D-Ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 271

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 7/241 (2%)

Query: 1   MRQFLVIIAMA-----MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+ FL +  +       L+N        E+ +   +T++DT +G +IAE+       PAS
Sbjct: 1   MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           LTK+M AY+    +K  K      IT +   +  ++  S    K G  +++D  L  LIV
Sbjct: 61  LTKMMVAYIALKEIKAGKLKKEEIITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++L
Sbjct: 121 MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPPGITMPDHYTTAHDLSLL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A 
Sbjct: 181 GQALIKQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS 240

Query: 234 Q 234
           +
Sbjct: 241 R 241


>gi|225572263|ref|ZP_03781127.1| hypothetical protein RUMHYD_00557 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040268|gb|EEG50514.1| hypothetical protein RUMHYD_00557 [Blautia hydrogenotrophica DSM
           10507]
          Length = 357

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 65/324 (20%), Positives = 119/324 (36%), Gaps = 33/324 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D + G V+ E         AS TK++T  +               +T+S  A+  P   
Sbjct: 1   MDGSNGRVLYEKDGKTVRANASTTKVLTCILALELGDG-----DDVVTVSAKAAAQPDVQ 55

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
               +G T  L++ L  L++KS ND AVAIAE L  + + F + MN+ +K +G + THF+
Sbjct: 56  LNIVEGETYYLEDLLYSLMLKSHNDSAVAIAEHLGGSVEGFAKMMNDKAKEIGCTDTHFV 115

Query: 154 NAHGVVQHG----HYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKYPNTN 204
             +G+        H TTA D+A++     ++       Q   Y        +     N N
Sbjct: 116 TPNGLDASDTGGKHGTTATDLALIMRYAISNPAFLTIAQTREYSFSDISGKRQFVVTNAN 175

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLS 261
             +    G    KTGFT  +G+  V +  +  ++ I  +L      +++ + + + +LL 
Sbjct: 176 AFLDMMDGVIAGKTGFTADAGYCYVCAWQRDGRTFIVALLACGWPGNKSYKWQDARTLLD 235

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSN----------------EVPNISEEVCTTQKEIIN 305
            G  N                                     E P   ++     K+   
Sbjct: 236 YGMENYQLAAYWKEPSLHVITVKDGIPKSGQLYDTARVNVICECPQKDKDQRILLKKGEK 295

Query: 306 YNTQMKEAKDKESHFIDFEKITLL 329
                +      +     +++  +
Sbjct: 296 IKMHCETPSMLRAPVKKGQQVGTV 319


>gi|168204840|ref|ZP_02630845.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170663667|gb|EDT16350.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 423

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 68/349 (19%), Positives = 127/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F                    Y   LD +TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFTPTKATVQAAEISQPNIVGKYAVTLDYDTGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T    ++       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKAQQPYTLNNSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ +  + +KF   MN+  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGVAGSAEKFSVMMNDEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVSETMALKDSDITVNGKKVLLENRNKELGI-DGNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGAVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|57239549|ref|YP_180685.1| penicillin-binding protein dacF precursor [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58579535|ref|YP_197747.1| penicillin-binding protein dacF precursor [Ehrlichia ruminantium
           str. Welgevonden]
 gi|57161628|emb|CAH58557.1| putative exported D-alanyl-D-alanine carboxypeptidase [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58418161|emb|CAI27365.1| Penicillin-binding protein dacF precursor [Ehrlichia ruminantium
           str. Welgevonden]
          Length = 290

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFL----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M +  VI+ + +L+ + P +    +     K     + D ++  ++ E+  D   + +S+
Sbjct: 2   MLRSFVIVFIYVLTCLLPTINNTYAADIQTKASEIAIFDLSSNIMLFEHNIDRKIHLSSM 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
             LMT YV FS++K     +      SK A +    +   + G  + + + L  +I  SA
Sbjct: 62  NNLMTLYVAFSYMKPGFVRMEDKYIASKEAWQQGGPSIFLRAGQPVPVRDLLDGIITLSA 121

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND ++ +AE +  +++ FV+ MN  ++ L L++++F N  G++     T+ARD+  L+ R
Sbjct: 122 NDASITLAEGIAGSQENFVKEMNQMARKLNLTSSNFTNVTGLLDSNQTTSARDLITLAQR 181

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT-CASGFNIVASAIQG 235
           +  DFP+Y H F  K L+       +TN  + + +  DGM    T        + S  + 
Sbjct: 182 LFNDFPEYYHLFSKKDLKFNNIYQKSTNTLLNSDIAIDGMAVKNTDQDDNHGAIISIKKD 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            + ++ +I G  +          L++  + + + +     + K
Sbjct: 242 GRRILLLINGLENNEELLSEVQLLINYVYNDFSTKTIFQKVNK 284


>gi|270290040|ref|ZP_06196266.1| D-alanyl-D-alanine carboxypeptidase [Pediococcus acidilactici 7_4]
 gi|270281577|gb|EFA27409.1| D-alanyl-D-alanine carboxypeptidase [Pediococcus acidilactici 7_4]
          Length = 415

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 68/369 (18%), Positives = 144/369 (39%), Gaps = 41/369 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L++IA  +L       + A                   +D+ TG V+ E + D   
Sbjct: 1   MKKVLLVIATLLLFATGVTPAAAATQTSSLVNPEITAKSALAIDSETGQVLYEKHADQVL 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNA 107
             AS++K+++AY++   ++  K     P+ I+ + ++   +    N     G   T+ N 
Sbjct: 61  PIASMSKVLSAYLIMKSVQSGKMRWDQPVKINADIAKISENSELTNVPLTAGKAYTVKNL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------- 158
           L   ++ SAN   +A+ ++   + +KFV  M  T ++ G+      NA G+         
Sbjct: 121 LDASLIYSANAAIIALGKAQAGSSRKFVDEMRATVRSWGIKDAKLYNAAGLLENQVGAEK 180

Query: 159 -----VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTN---WA 206
                    +  +A DMA++   +  +FP+ +   +I+ L+           N N     
Sbjct: 181 YPNSPKNAENQMSANDMAVVIQHVLKEFPEILQITKIQKLDFDTGSGKVTMINHNELLPG 240

Query: 207 VGTFLGAD---GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
              +       G+KTG + A+G + VA+     + +I+V+LGA   + R   + ++    
Sbjct: 241 GAQYDHQYQLDGLKTGTSLAAGEDFVATGKVNQRRIISVVLGAKT-DHRFTDTKAIWQAL 299

Query: 264 FYNKTDRKKINYIIKDFYQ--QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES-HF 320
             N T  K                      +++ +   + +      ++ + K K +   
Sbjct: 300 MTNLTVVKTNLKNQASVVMDSAKQRQVKLQLAQPLAYWKAKKGGQMPKLDQVKLKSAKTK 359

Query: 321 IDFEKITLL 329
              +K  ++
Sbjct: 360 APVDKNQVI 368


>gi|166033039|ref|ZP_02235868.1| hypothetical protein DORFOR_02761 [Dorea formicigenerans ATCC
           27755]
 gi|166027396|gb|EDR46153.1| hypothetical protein DORFOR_02761 [Dorea formicigenerans ATCC
           27755]
          Length = 490

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/335 (20%), Positives = 121/335 (36%), Gaps = 23/335 (6%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++  TG ++     D    PAS+TK++TA V     +       T  
Sbjct: 81  PQGPGTYGEAGIVMEVGTGAILYAKNIDAHEYPASITKVLTALVALENGQ--LTDNVTFS 138

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE----SLCKTEKKFVQ 136
             S    +   S+   K+G+ +TLD A+  +++ SAN+ A AI E    +       F++
Sbjct: 139 HDSVAFLQRGDSSVGLKEGNVITLDQAMHAMLLASANEAAYAIGESVGVNAGHDYNWFIE 198

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM-----AILSWRIKTDFPQYMHYFQIK 191
            MN+  K LG   ++F N +G+    HYT ARDM      +          Q ++Y    
Sbjct: 199 QMNSRCKELGGENSNFANTNGLHDPNHYTCARDMALIGRELFKHPEFFQIVQTLNYTIPA 258

Query: 192 GLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
               +   +   +          +    G KTG+T  +   ++  A  G   L+ V+L  
Sbjct: 259 SETTEEHVFHQKHKMLQPSNSNYYPYTIGGKTGYTSDALSTLITMADNGQTQLVCVVLRT 318

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
             +N     + +L    F N T          +  +  L+ +  +    V          
Sbjct: 319 HGKNI-YPDTTNLFEYAFNNFTKVDVTTQEKSEDIETFLTEDGQSEPNYVMLPNGVDFTA 377

Query: 307 NTQMKEAKD------KESHFIDFEKITLLKNKITK 335
             Q              ++  D  ++   K K++K
Sbjct: 378 LDQKITQDTEDSSTGIVTYSYDGHELGTAKVKLSK 412


>gi|58617588|ref|YP_196787.1| penicillin-binding protein dacF precursor [Ehrlichia ruminantium
           str. Gardel]
 gi|58417200|emb|CAI28313.1| Penicillin-binding protein dacF precursor [Ehrlichia ruminantium
           str. Gardel]
          Length = 290

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 1   MRQFLVIIAMAMLSNIFPFL----SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M +  VI+ + +L+ + P +    +     K     + D ++  ++ E+  D   + +S+
Sbjct: 2   MLRSFVIVFIYVLTCLLPTINNTYAADIQTKASEIAIFDLSSNIMLFEHNIDRKIHLSSM 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
             LMT YV FS++K     +      SK A +    +   + G  + + + L  +I  SA
Sbjct: 62  NNLMTLYVAFSYMKPGFVRMEDKYIASKEAWQQGGPSIFLRAGQPVPVRDLLDGIITLSA 121

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND ++ +AE +  +++ FV+ MN  ++ L L++++F N  G++     T+ARD+  L+ R
Sbjct: 122 NDASITLAEGIAGSQENFVKEMNQMARKLNLTSSNFTNVTGLLDSNQTTSARDLITLAQR 181

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT-CASGFNIVASAIQG 235
           +  DFP+Y H F  K L+       +TN  + + +  DGM    T        + S  + 
Sbjct: 182 LFNDFPEYYHLFSKKDLKFNNIYQKSTNTLLNSDIAIDGMAVKNTDQDDNHGAIISIKKD 241

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            + ++ +I G  +          L++  + + + +     + K
Sbjct: 242 GRRILLLINGLENNEELLSEVQLLINYVYNDFSTKTIFQKVNK 284


>gi|295094890|emb|CBK83981.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus sp. ART55/1]
          Length = 376

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 64/323 (19%), Positives = 123/323 (38%), Gaps = 23/323 (7%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                LLD  TG ++ +   D     AS TK++T  +           L   +T S  AS
Sbjct: 40  ARNAILLDGETGDILYDKCSDEHRPNASTTKILTCILAIEC-----GNLADDVTASSYAS 94

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           + P      + G   TL++ L  ++++S ND AV IAE +  + + F + MN  ++ +G 
Sbjct: 95  KMPEVRLGVRDGEKYTLEDMLYAMMLESYNDAAVVIAEHIGGSVQHFAEMMNAKAEEIGC 154

Query: 148 SATHFMNAHGVVQHG----HYTTARDMAILSWRIK---TDFPQYMHYFQIKGLEIKGKK- 199
            +T+F+  +G+        H T+A D+  +            +++   + K         
Sbjct: 155 HSTYFITPNGLDAQDENGVHGTSAEDLVRIMRYCILISPQKDEFLKITRTKSYTFTDNTG 214

Query: 200 -----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
                  N N  +     A   KTGFTC +G+  + +A     + I  +LG    N    
Sbjct: 215 NRTFACINHNAFLDMMPCALSGKTGFTCDAGYCYIGAAEVEGHTYIWALLGCGWPNNKTY 274

Query: 252 RNKVSASLLSMGFYN--KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
           + K S +L++    +   T+ K            + S+   + + +    +    +  + 
Sbjct: 275 KWKDSRALVAFAQEHTIYTELKAPASPDIRITYSSGSSADGSTATKCRLNRTVTASEGSI 334

Query: 310 MKEAKDKESHFIDFEKITLLKNK 332
               K  ++      K  +  + 
Sbjct: 335 QYVYKVSDTLKAPVHKGAVAGSL 357


>gi|15827291|ref|NP_301554.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium leprae TN]
 gi|221229769|ref|YP_002503185.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium leprae
           Br4923]
 gi|13092840|emb|CAC30200.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium leprae]
 gi|219932876|emb|CAR70785.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium leprae
           Br4923]
          Length = 411

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 101/278 (36%), Gaps = 12/278 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D N+G VIA   P     PAS+ K     V+ +     
Sbjct: 89  IVTAPDTPPVPGDLSAEAWLVADLNSGAVIAARDPHGRHRPASIIK-----VLLAMASIN 143

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  +   +    +      G T T++  L  L+++S ND A ++A  L   ++
Sbjct: 144 TLNLNKSVAGTAEDAAAEGTKVGVHDGGTYTINQLLHGLLMQSGNDAAHSLAMQLGGMQQ 203

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
              + +N  +  LG   T      G+   G  T+A D+ +       +            
Sbjct: 204 ALQK-INVLAAKLGGQDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPSFSNIVATRTF 262

Query: 193 L-----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A +  + L+AV+L G 
Sbjct: 263 NFPGPGDHPGYQLENDNQLLYQYPGALGGKTGYTDDAGQTFVGAANRNGRRLMAVLLHGT 322

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
                  + +A LL  GF      +    I  D     
Sbjct: 323 RQPIAPWEQAAHLLDYGFSTAVGTQIGTLIEPDPTVAG 360


>gi|332313242|gb|EGJ26337.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes str.
           Scott A]
          Length = 244

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 6/243 (2%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 +     G  + E   D     ASLTKLMTA++V   +   +      + + +  
Sbjct: 2   SANAAAVYSVENGEPLYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRLD 61

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                S     +  T ++ +    ++  SAND A  +          F + MNN +K LG
Sbjct: 62  DPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKLG 119

Query: 147 LSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYPN 202
           +S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  +
Sbjct: 120 MSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLES 179

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ +
Sbjct: 180 TNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLMEV 239

Query: 263 GFY 265
           GF 
Sbjct: 240 GFK 242


>gi|188588227|ref|YP_001921472.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498508|gb|ACD51644.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 289

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 29/296 (9%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYP 47
           MR+       + ++   M   IF   ++A                 LD  +  V+ E   
Sbjct: 1   MRKSIKNNIVITMLLSIMFFQIFSKAALADSKLKDNFRVNARCAIALDRESKEVLFEQNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                 AS TK++TA +           L   + ISKNA+    S   +K G  + L   
Sbjct: 61  YEIVPMASTTKILTAIIAIEQ-----GDLDKKVVISKNAASIRGSKVGYKAGEEVGLKEL 115

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
              L+ KS ND A+AIAE+L  + + F Q MN+ +  +G+  +HF + HG+  + HY++A
Sbjct: 116 TFGLMFKSGNDAAIAIAETLGGSVEGFAQIMNHYATGIGIIDSHFESPHGLDSNSHYSSA 175

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCAS 224
            D+A+L+ +              +  + K      Y N N  +     A+G+KTG+T  +
Sbjct: 176 YDLALLTAKGMEFDLFREIVGSKQISKEKYNFTRDYNNINKILWLIPEANGVKTGYTGGA 235

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM-----GFYNKTDRKKINY 275
           G  +V+S     + +I V+L   D   R   +  + +       F N   ++ +  
Sbjct: 236 GKCLVSSVNHQGKDIIIVVLNCPD---RWAQTQKIYNHILETVAFENHNIKELVYK 288


>gi|294637382|ref|ZP_06715676.1| penicillin-binding protein 7 [Edwardsiella tarda ATCC 23685]
 gi|291089460|gb|EFE22021.1| penicillin-binding protein 7 [Edwardsiella tarda ATCC 23685]
          Length = 309

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 92/254 (36%), Gaps = 10/254 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                             ++D NT  VI  ++PD     AS+TKLMTA V          
Sbjct: 31  TPSAQQRAPLALASGSAMVMDLNTHQVIYASHPDVQVPIASITKLMTAMVALDAHP---- 86

Query: 75  MLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
            L   I +    ++      S  + GS  T    L L ++ S N  A  +A         
Sbjct: 87  DLNEVIAVDIRHTKELKGVFSRVRVGSEQTRREMLLLALMSSENRAAATLAHHYPGGYDA 146

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F++ MN  ++ LG++ TH++   G+      +    + +L    +      +   + + +
Sbjct: 147 FIRAMNAKARALGMTRTHYVEPTGLSPLNVSSARDLVKLLQATKRYPLISELSTTETQSV 206

Query: 194 EIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             +   Y     NTN  +          KTGFT  +G  +    + G + +  V+L A  
Sbjct: 207 TFRHPTYTETFNNTNHLLRNDKWDIALTKTGFTNQAGHCLAMRTVIGGRPVALVVLDAFG 266

Query: 249 RNTRNKVSASLLSM 262
           + T    +  L   
Sbjct: 267 KYTHFADANRLREW 280


>gi|118617116|ref|YP_905448.1| penicillin-binding protein DacC [Mycobacterium ulcerans Agy99]
 gi|118569226|gb|ABL03977.1| penicillin-binding protein DacC [Mycobacterium ulcerans Agy99]
          Length = 415

 Score =  129 bits (323), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 98/283 (34%), Gaps = 12/283 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D ++G +IA   P     PAS+ K++   V        
Sbjct: 89  IIAAPDTPPVPGDVSAEAWLVGDLDSGAIIAARDPHGRHRPASIIKVLVVMVSIKE---- 144

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
                  +  + + S    +      G   T++  L  L++ S ND A A+A  L   + 
Sbjct: 145 -LNQNKAVPGTNDDSAAEGTKVGVNAGGMYTVNQLLHGLLMHSGNDAAHALAIQLGGMQT 203

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 204 AL-EKINMLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPIFADIVATRTF 262

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 E  G +  N N  +  + GA G KTG+T  +G   V +A    + L AV+L G 
Sbjct: 263 DFPGHGEHPGYELENDNHLLYNYPGALGGKTGYTDDAGQTFVGAANHNGRRLFAVLLHGT 322

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
                  + +A LL  GF      +  + I  D          
Sbjct: 323 RQPIAPWEQAAHLLDYGFSTAQGTQIGSLIEPDPSLVAPKETP 365


>gi|302874417|ref|YP_003843050.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulovorans 743B]
 gi|307690977|ref|ZP_07633423.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           cellulovorans 743B]
 gi|302577274|gb|ADL51286.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulovorans 743B]
          Length = 444

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 71/360 (19%), Positives = 137/360 (38%), Gaps = 31/360 (8%)

Query: 1   MRQFLV------IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ ++       I++ + + +F            Y   LD NTG +I     D    PA
Sbjct: 1   MKKTILTTMATLAISLTLSTKVFSEPLPEPNIVGQYAITLDVNTGEIIYAKNADAKAYPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TKLM+A ++   L ++  +  T     + +S       +   G  ++ D ALK +++ 
Sbjct: 61  SITKLMSAILLEKNLSKEDLLTYTANAKVQPSSAINTDRLSVPVGQQISADTALKTMLLA 120

Query: 115 SANDI----AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--HGHYTTAR 168
           SAND+    A  I +       +F+  MN  ++ LG+  THF+ ++G+    + H TTA 
Sbjct: 121 SANDMTEMVATNIPKRNSNDNTEFIAMMNAEAQRLGMVNTHFVTSNGLDDNTNEHLTTAY 180

Query: 169 DMAILSWRIKTDFP----QYMHYFQIKGLEIKGKKYPNTNWAVG-----TFLGADGMKTG 219
           D+ IL   +  +        +    I    +   +  NTN  V            G KTG
Sbjct: 181 DLTILGREVAKNPWTREIWPLKSTIIAIPGLASFEIGNTNQFVYPNFELHDPTCIGSKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILG---ALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           +T  +G  +++   + ++ +I V+L    + +          ++   +    ++K +   
Sbjct: 241 YTDKAGRCLLSIFERDNRQIIGVVLNSQLSPNDLVAFNDMKQIIDYSYS--AEKKVLEAT 298

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                            +    T              K  E   I  + ++   N+I  K
Sbjct: 299 DPATGVNTSYK-----KDTTVLTVPVEYKVFKTFGPRKTIEVPVILDDDLSTYTNEINSK 353


>gi|329116466|ref|ZP_08245183.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus parauberis
           NCFD 2020]
 gi|326906871|gb|EGE53785.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus parauberis
           NCFD 2020]
          Length = 412

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 147/367 (40%), Gaps = 32/367 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ ++I+++ + +       +     K       D  +G V+ E         AS TK+
Sbjct: 1   MKKIIMILSLLVSTITITTTSAEDIELKTDSAIAFDIESGKVLYEKNAKKILPVASATKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  +++ K   ++P+TIS    +       ++        T+   +K ++V +A
Sbjct: 61  LTTYMVYKEIEQGKLEWSSPVTISDYPFQLTTNYTISNVPLDARKYTVKQLMKAMLVTNA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--------------G 162
           N  A+A+AE +  TE  FV  M    +  G++     NA G+                  
Sbjct: 121 NSAAIALAEKIGGTEPIFVDKMKKQLEVWGINDAKLYNATGLPNSILGDNIYPKSKQSAE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A+D+AI++  + T++P+ + Y  +      G+   + N+ +  +     G +G+  
Sbjct: 181 NKLSAKDLAIITHHLLTEYPEVLKYTSLPKATFDGQDIYSYNYMLEGYPYERVGINGLFL 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKKIN 274
           G    SG   +AS+      +I++++GA   +       K ++ LL   + N      + 
Sbjct: 241 GSPEKSGPTFIASSKINKMKVISIVIGAHQEDNDVTEPFKTTSLLLDYLYQNFERVTLLK 300

Query: 275 YIIKDFYQQNLSNEVPN------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                  +     + P+        E++   +K    +  ++   K++   +    K   
Sbjct: 301 KNQVIKDKSFAIKDSPDQSVSISPKEDMTIIKKIGTTHQNEIIYNKNENPFYAPLAKGDT 360

Query: 329 LKNKITK 335
           L     K
Sbjct: 361 LATAKYK 367


>gi|21674088|ref|NP_662153.1| D-alanyl-D-alanine carboxypeptidase [Chlorobium tepidum TLS]
 gi|21647242|gb|AAM72495.1| D-alanyl-D-alanine carboxypeptidase [Chlorobium tepidum TLS]
          Length = 474

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 22/278 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPA 54
           R+ L  +    +  + P  + A+    P        Y + +T +   +     D P +PA
Sbjct: 12  RKVLFTLLAFFVLTLIPLTASAKRRPAPEGEDAVAAYIVKETGSPEFLKSKNADTPRSPA 71

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK+MT  +     +     +   +TI   A++  P+ + FK G    L + +K  +V 
Sbjct: 72  SLTKIMTCLLAIESGR-----MNDVVTIPLEATQVEPTRAGFKPGEQFRLRDLVKAAMVN 126

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---QHGHYTTARDMA 171
           S+ND A AIA  L  +   FV  MN  ++ LG+S T F N  G       G+ TTARD+ 
Sbjct: 127 SSNDAAFAIAIHLGGSLDAFVAMMNARARALGMSHTVFTNPAGYDRGIYAGNRTTARDLV 186

Query: 172 ILSWRIKTDFPQYMHYFQIKGL-----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           IL+ R              +         K       N  +  +  + G+KTG+T  +G 
Sbjct: 187 ILTERAIRFPEFNAIAKLDRVDFNELSTGKIYSLRTHNKLLERYPYSVGIKTGYTSMAGP 246

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
            ++A A++  + ++ ++L A     R  +++++   GF
Sbjct: 247 CLIARALRNGKDMLVIMLSART--DRWSLASTMFDQGF 282


>gi|16804849|ref|NP_466334.1| hypothetical protein lmo2812 [Listeria monocytogenes EGD-e]
 gi|224502774|ref|ZP_03671081.1| hypothetical protein LmonFR_09674 [Listeria monocytogenes FSL
           R2-561]
 gi|16412312|emb|CAD01025.1| lmo2812 [Listeria monocytogenes EGD-e]
          Length = 272

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEALYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|284042207|ref|YP_003392547.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Conexibacter
           woesei DSM 14684]
 gi|283946428|gb|ADB49172.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Conexibacter
           woesei DSM 14684]
          Length = 326

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 13/243 (5%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L+D  +G V+     +     AS+TK+MTA +V    K ++ +  TP  +    + 
Sbjct: 87  RAGLLVDAGSGRVLWRLEAERRLPIASVTKMMTALLVAERTKPREPVPITPQAV----AY 142

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                     G  +  +  L  L++ S ND A+A+A+ +  +  +FV+ MN  ++ LGL+
Sbjct: 143 TGSGVGMLPVGRRVQTETLLYGLMLPSGNDAAIALAQHVSGSVARFVRLMNARARELGLT 202

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGKKYPNT 203
            T F +  G+V  G+++ A D+A+L   +                    +        N 
Sbjct: 203 CTRFASPSGIVDSGNWSCAPDLALLGRELLRHRRLARVVRTPLAVMPLPIRGGRVWLANH 262

Query: 204 NWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           N  +   + G +G+KTG+T A+G   VAS  +  + LI V+L + D     + +  LL  
Sbjct: 263 NPLLRMRYAGVEGIKTGYTEAAGRCFVASVRRDGRRLIVVLLNSPDPG---RQARRLLDA 319

Query: 263 GFY 265
           GF 
Sbjct: 320 GFA 322


>gi|197117367|ref|YP_002137794.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Geobacter
           bemidjiensis Bem]
 gi|197086727|gb|ACH37998.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase, S11 family
           [Geobacter bemidjiensis Bem]
          Length = 287

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 20/271 (7%)

Query: 1   MRQF----LVIIAMAMLSNI--FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++F    ++ +   +L     +   + +     P   L+    GH   E        PA
Sbjct: 1   MKKFSSLRVLTLTAGILFAAVCYADAASSPFVHPPSAYLI-QVNGHTYKERNAHIRRPPA 59

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK+MTA +V    K     L   + +S+ A+    S    ++G  +T+ + L   ++ 
Sbjct: 60  SLTKIMTALIVMERCK-----LDEVVVVSRGAARETGSRIGLRRGERLTVRDLLAATLMA 114

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           SAND   A+A+  C  ++ FV  MN  ++ L L  T F NA G    G YTTA D+A+L+
Sbjct: 115 SANDACRALADHACGNQRDFVVQMNARARALQLQNTRFTNACGHDNAGLYTTAHDLALLT 174

Query: 175 WRIKTDFPQ-----YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
            +                        +     N N  +G + GA G+KTG T  +G  +V
Sbjct: 175 EKAMQKPYFAELVARKEMRIRTLNSKRSYYLRNKNRLIGRYPGAIGVKTGTTPNAGQCLV 234

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           A A + ++ ++ VI+ A     R +V+ ++L
Sbjct: 235 AIAEREERKVLLVIMHA---RNRWRVAPAML 262


>gi|251780348|ref|ZP_04823268.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243084663|gb|EES50553.1| putative D-alanyl-D-alanine carboxypeptidase DacB [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 289

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 29/296 (9%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYP 47
           MR+       + ++   M   IF   ++A                 LD  +  V+ E   
Sbjct: 1   MRKSIKNNIVITMLLSIMFFQIFSKTALADSKLKDNFRVNARCAIALDRESKEVLFEQNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                 AS TK++TA +           L   + ISKNA+    S   +K G  + L   
Sbjct: 61  YEIVPMASTTKILTAIIAIEQ-----GDLDKKVVISKNAASIRGSKVGYKAGEEVGLKEL 115

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
              L+ KS ND A+AIAE+L  + + F Q MN+ +  +G+  +HF + HG+  + HY++A
Sbjct: 116 AFGLMFKSGNDAAIAIAETLGGSVEGFAQIMNHYATGIGIIDSHFESPHGLDSNSHYSSA 175

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCAS 224
            D+A+L+ +              +  + K      Y N N  +     A+G+KTG+T  +
Sbjct: 176 YDLALLTAKGMEFDLFREIVGSKQISKEKYNFTRDYNNINKILWLIPEANGVKTGYTGGA 235

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM-----GFYNKTDRKKINY 275
           G  +V+S     + +I V+L   D   R   +  + +       F N   ++ +  
Sbjct: 236 GKCLVSSVNHQGKDIIIVVLNCPD---RWAQTQKIYNHILETVAFENHNIKELVYK 288


>gi|227890476|ref|ZP_04008281.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus johnsonii ATCC
           33200]
 gi|227849045|gb|EEJ59131.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus johnsonii ATCC
           33200]
          Length = 308

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 120/299 (40%), Gaps = 35/299 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE--------------TNKLPYYTLLDTNTGHVIAENYP 47
           +++L +I++ + +  F                        +     ++   G  I     
Sbjct: 10  KKYLWLISLVIAAICFFVWKNNFNSNRMPSNYHVDQVDLNVKAAVAINAKDGSTIYAKNA 69

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           +     AS+TKL+T Y+    +KEKK    T +T ++           ++   + G   T
Sbjct: 70  NQSLPIASMTKLLTVYLTLQAIKEKKISWDTTVTPTQEIVDLGSNPDYASVPLRLGQKYT 129

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-- 161
           +       ++KSAN+ A  +A ++  +E  F+  M   ++   L+   F+   G+ +   
Sbjct: 130 VRELYYAALIKSANNAARLLAIAVSGSETNFLNQMRQQARKWKLNNAKFVTVDGLPEKKK 189

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                     +  +A DMAI++ ++  ++P+ ++  ++     +     N+N  +     
Sbjct: 190 NFLGMTTTVENKMSANDMAIVARKLIINYPEILNTTKLARAYFQNTLMINSNKMLNGLSY 249

Query: 213 ------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                  DG+KTG T  +G     +  +  + +I VILGA + N R   +  LLS  F 
Sbjct: 250 YDSIFPVDGLKTGTTDGAGSCFTCTLNKNGKRVITVILGAENDNERFVETKKLLSYCFN 308


>gi|309782592|ref|ZP_07677315.1| D-alanyl-D-alanine carboxypeptidase family protein [Ralstonia sp.
           5_7_47FAA]
 gi|308918683|gb|EFP64357.1| D-alanyl-D-alanine carboxypeptidase family protein [Ralstonia sp.
           5_7_47FAA]
          Length = 396

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 10/253 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D N G V+ +         AS+TKLMTA VV    +    +L  
Sbjct: 116 ATPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEI 175

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                ++      + S  + G+ +T ++ L L ++ S N  A A+  +       FV  M
Sbjct: 176 TD---EDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAM 232

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  ++ LG++ TH+++++G+    + ++A+D+A +        P    +       +   
Sbjct: 233 NRKARELGMNDTHYVDSNGL-SSSNVSSAQDLAKI-VMAAYKVPLIRQFTTTPEHTVSAN 290

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +   Y NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR 
Sbjct: 291 GRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRF 350

Query: 254 KVSASLLSMGFYN 266
             +  + +    N
Sbjct: 351 ADATRVRNWLERN 363


>gi|241663205|ref|YP_002981565.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ralstonia
           pickettii 12D]
 gi|240865232|gb|ACS62893.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ralstonia
           pickettii 12D]
          Length = 379

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 10/253 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D N G V+ +         AS+TKLMTA VV    +    +L  
Sbjct: 99  ATPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEI 158

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                ++      + S  + G+ +T ++ L L ++ S N  A A+  +       FV  M
Sbjct: 159 TD---EDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAM 215

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  ++ LG++ TH+++++G+    + ++A+D+A +        P    +       +   
Sbjct: 216 NRKARELGMNDTHYVDSNGL-SSSNVSSAQDLAKI-VMAAYKVPLIRQFTTTPEHTVSAN 273

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +   Y NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR 
Sbjct: 274 GRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRF 333

Query: 254 KVSASLLSMGFYN 266
             +  + +    N
Sbjct: 334 ADATRVRNWLERN 346


>gi|29829956|ref|NP_824590.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces avermitilis
           MA-4680]
 gi|29607066|dbj|BAC71125.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           avermitilis MA-4680]
          Length = 447

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 104/335 (31%), Gaps = 34/335 (10%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              I +      + + D  +G V+A +       PAS  K++ A  +     +       
Sbjct: 92  APVIPKDITARSWIVADAESGDVLAAHNAHWRLPPASTLKMLFADTLLPKFPK---NTEH 148

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +  S  A     S+    K +     + L L +   + + AV +  ++ K   + V+ M
Sbjct: 149 KVVPSDLAGMGAGSSVVGIKENETYTVHDLWLGVFLRSGNDAVHVLSAMNKGVGQTVEDM 208

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK------- 191
              ++ L    TH ++  G       ++A D+ + +           +   ++       
Sbjct: 209 QEHARELQALDTHVVSPDGYDAPRQVSSAYDLTLFARSGLQKKDFREYCATVRAQFPGET 268

Query: 192 -----GLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                       +  NTN        +  + G  G+K G T  +G      A +  + L+
Sbjct: 269 TKKKGKTTRGSFEIQNTNRLLAGDSDITPYQGIAGVKNGNTSNAGATFTGVAERNGKVLL 328

Query: 241 AVILGALD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
             ++       N   K +A LL  GF        +  ++    Q   ++  P  +  V  
Sbjct: 329 VTVMNPEKNEHNEVYKETAKLLDWGFGAADKVTPVGELVAP--QGADTSAQPGANAPVSP 386

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                          +  +    D +        I
Sbjct: 387 GAGAD---------KESAKPVAADLKDGGSSGVGI 412


>gi|329666891|gb|AEB92839.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus johnsonii DPC
           6026]
          Length = 308

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 119/299 (39%), Gaps = 35/299 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           +++L +I++ + +  F                 +      +     ++   G  I     
Sbjct: 10  KKYLWLISLVIAAICFFVWKNNFNSNRMPSNYHADQVDLNVKAAVAINAKDGSTIYAKNA 69

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +     AS+TKL+T Y+    +KEKK    T +T ++   +   +         +     
Sbjct: 70  NQSLPIASMTKLLTVYLTLQAIKEKKISWDTTVTPTQEIVDLGSNPDYASVPLRLGQKYT 129

Query: 108 LKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-- 161
           ++ L      KSAN+ A  +A ++  +E  F+  M   ++   L+   F+   G+ +   
Sbjct: 130 VRELYDAALIKSANNAARLLAIAVSGSETNFLNQMRQQARKWKLNNAKFVTVDGLPEKKK 189

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                     +  +A DMAI++ ++ TD+P+ ++  +      +     N+N  +     
Sbjct: 190 NFLGMTTTVENKMSANDMAIVARKLTTDYPEILNTTKQARAYFQNTLMTNSNKMLSGLSY 249

Query: 213 ------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                  DG+KTG T  +G     +  +  + +I VILGA + N R   +  LLS  F 
Sbjct: 250 YDSTFPVDGLKTGTTDGAGSCFTCTVNKNGKRVITVILGAENDNERFVETKKLLSYCFN 308


>gi|228990377|ref|ZP_04150342.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
 gi|228768903|gb|EEM17501.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
          Length = 411

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 74/325 (22%), Positives = 131/325 (40%), Gaps = 17/325 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P           +   +D  TG V+ +        PAS+TK++TA ++    K     
Sbjct: 21  PVPAPGPGPNVFGQFAVSIDAKTGDVLYDKNAHQHAFPASMTKVLTAILLMEHTK----- 75

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND+A AI E +  + + 
Sbjct: 76  PEEQFTFSQPALDQEKSNYQLEFQVGETINRNTALTILMVLSANDVAYAIGERIGGSIEN 135

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG   +HF+  +G+    HYTTA DMA+++      +P+ +     K  
Sbjct: 136 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTAYDMAMITR-GVQQYPEILQAMNTKRT 194

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    ++ V++ A  R 
Sbjct: 195 TVTTSRQTVSIFNKATYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIVNVVM-ASQRP 253

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 254 EIYEDMRQIADHSFSQFAKQMVLDKNNWHQKATYLDKNIDCELEKSAELMLKKDEGKNVK 313

Query: 308 TQMK-EAKDKES-HFIDFEKITLLK 330
           T  +    DKE  +     +  ++ 
Sbjct: 314 TVFRTAPVDKEKLYQKGIHRGDVIG 338


>gi|228996477|ref|ZP_04156116.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|229004129|ref|ZP_04161930.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228756990|gb|EEM06234.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228763109|gb|EEM12017.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
          Length = 411

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 74/325 (22%), Positives = 131/325 (40%), Gaps = 17/325 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
             P           +   +D  TG V+ +        PAS+TK++TA ++    K     
Sbjct: 21  PVPAPGPGPNVFGQFAVSIDAKTGDVLYDKNAHQHAFPASMTKVLTAILLMEHTK----- 75

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND+A AI E +  + + 
Sbjct: 76  PEEQFTFSQPALDQEKSNYQLEFQVGETINRNTALTILMVLSANDVAYAIGERIGGSIEN 135

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG   +HF+  +G+    HYTTA DMA+++      +P+ +     K  
Sbjct: 136 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTAYDMAMITR-GVQQYPEILQAMNTKRT 194

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    ++ V++ A  R 
Sbjct: 195 TVTTSRQTVSIFNKATYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIVNVVM-ASQRP 253

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 254 EIYEDMRQIADHSFSQFAKQMVLDKNNWHQKATYLDKNIDCELEKSAELMLKKDEGKNVK 313

Query: 308 TQMK-EAKDKES-HFIDFEKITLLK 330
           T  +    DKE  +     +  ++ 
Sbjct: 314 TVFRTAPVDKEKLYQKGIHRGDVIG 338


>gi|311896449|dbj|BAJ28857.1| putative peptidase S11 family protein [Kitasatospora setae KM-6054]
          Length = 371

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 98/286 (34%), Gaps = 15/286 (5%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            ++ +      + + D  +G V+A         PAS  K++ A  V            T 
Sbjct: 31  PALPKELTGRSWVVADAGSGQVLAAFNAHAELPPASTLKMLFAVTVLPRFPASDVHRVTW 90

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
              S+       S+    K         L   +  S+ + AV +  ++     K V  M 
Sbjct: 91  ---SELQGMGAGSSLVGIKEDLDYKVEDLWRGVFLSSGNDAVHVLANMNGGVAKTVADMQ 147

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
             +  L    TH ++  G    G  T+A D+ + +     D P++  Y   +  +     
Sbjct: 148 ARADRLRARDTHVVSPDGYDMDGQVTSAYDLTLFARAGLRD-PEFRGYCATRWAQFPGAV 206

Query: 196 -------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                        NT+  +G + G  G+K G+T  +G     +A +  ++L+  ++   D
Sbjct: 207 DKKTGQRGSFGIANTDRLLGKYPGLIGVKNGYTTNAGATYTGAAERDGRTLLVTVMHPAD 266

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
                  +A+LL  GF        +  + +D   Q  +        
Sbjct: 267 GAKVYDEAAALLDWGFAAAGKAAPVGELAEDGGAQAPAEGPAAARP 312


>gi|229166209|ref|ZP_04293969.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228617307|gb|EEK74372.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
          Length = 407

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 73/326 (22%), Positives = 130/326 (39%), Gaps = 15/326 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG ++ +   +H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDMLYDKNANHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAEHIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNERAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITRGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSTQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 IYEDLKQMTEYSFGQFTKQTVLDKHSWHQKTTYLNKDVDSELENSAELMLKKDEGKNVKT 309

Query: 309 QMKEAKDKESHFIDFEKITLLKNKIT 334
             +   +       ++K       + 
Sbjct: 310 AFRV--NSVDKEALYQKGIHRGEVVG 333


>gi|307326560|ref|ZP_07605754.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
 gi|306887754|gb|EFN18746.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
          Length = 313

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 27/284 (9%)

Query: 6   VIIAMAMLSNIFPFLSI--------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           VI + A L+   P  +                   LLD NT   +     D     AS T
Sbjct: 16  VIASAAALTVAVPANAAQATEARSGPTEVSAKGAYLLDNNTNKELWAKAADTKRPMASTT 75

Query: 58  KLMTAYVVFSFLKEKKA-MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           KLMTA VV      +    +T   +     +    S +  +KG  +T+   L  L++ S 
Sbjct: 76  KLMTAVVVLDTRGLELGKKVTVKQSYIDYTARVGGSKADLQKGDKLTVKQLLYGLLLPSG 135

Query: 117 NDIAVAIAESL------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARD 169
            D A+A+A++        K  K F+  MN  +  LG++ +H+    G+ + G +YTT RD
Sbjct: 136 CDAAMALADTFGTGDTTAKRTKSFIAQMNKKASALGMTKSHYDTFDGISEGGQNYTTPRD 195

Query: 170 MAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
           MA L+     +            +          +   + NTN  +G++ GA G+KTG  
Sbjct: 196 MAKLARHALGNSTLGTVVKSVDTIQKAPAANGRTRTYYWNNTNRLLGSYSGAIGIKTGTG 255

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            A G  +V +A +  ++++ VIL A     R   +  +L   F 
Sbjct: 256 TAPGRCLVFAAKRDGRTVVGVILNAP---KRYPDAKKMLDWAFR 296


>gi|228920088|ref|ZP_04083437.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839544|gb|EEM84836.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 407

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAFPASTTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I+V++ A  R  
Sbjct: 191 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIISVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 250 IYEDLKQMAEYSFGQFTKQMVLDKHNWHQKTTYLNKDVNSELEQSAELMLKKDEGKNVKT 309

Query: 309 QMKEAK 314
             + A 
Sbjct: 310 IFRAAS 315


>gi|47093271|ref|ZP_00231042.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|226225362|ref|YP_002759469.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes
           Clip81459]
 gi|254930914|ref|ZP_05264273.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|47018345|gb|EAL09107.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|225877824|emb|CAS06539.1| Putative D-alanyl-D-alanine carboxypeptidase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293582460|gb|EFF94492.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|328468283|gb|EGF39289.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes 1816]
 gi|328469045|gb|EGF39999.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes 220]
          Length = 272

 Score =  128 bits (322), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEPLYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|270262024|ref|ZP_06190296.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Serratia
           odorifera 4Rx13]
 gi|270043900|gb|EFA16992.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Serratia
           odorifera 4Rx13]
          Length = 277

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 112/267 (41%), Gaps = 9/267 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R+F  +IA+++L  I P  + A          +++  TG  + +   D     ASLTKL
Sbjct: 12  LRRFRAVIALSLLFVIAPAQAAAPLVLHSKAVLVVNQRTGKTLFQKQADRVLPIASLTKL 71

Query: 60  MTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           MTA V     +     L   + ++  +      ++S    GS+++  + L + ++ S N 
Sbjct: 72  MTAMVALDSRRP----LGNKMRVTAADRDLLKKTHSRLTLGSSLSRRDMLHIALMSSENR 127

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A A++ +     K FV  MN  ++++G+    F ++ G+      +    + +++   +
Sbjct: 128 AAAALSRNYPGGRKAFVAKMNRKARSIGMKHARFYDSTGLTPRNVASANDLLKMVNHAYR 187

Query: 179 TDFPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQG 235
               +     +   +     +  Y ++N  +          KTG+T  +G  +V   +  
Sbjct: 188 YQTIRRFSTDRQHVVYPGRGQLVYRSSNGLINNRNWNIQLQKTGYTNEAGHCLVMRTLIK 247

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSM 262
            Q ++ ++LG+  R      +  L + 
Sbjct: 248 GQPVVIILLGSQQRYGHYDDALRLKTW 274


>gi|269102001|ref|ZP_06154698.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161899|gb|EEZ40395.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 285

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 6/244 (2%)

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G T+ + +  + +IV S ND  VA+AE +  +++ FV  MN  +KN+G+ +TH+ 
Sbjct: 1   MFLEVGKTVKVSDLNRGIIVDSGNDACVAMAEHVAGSQESFVDLMNAWAKNVGMKSTHYA 60

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLG 212
           N HG+     YTT  D+++L+  I  D P     +  K     G    N N       L 
Sbjct: 61  NVHGLDNPDLYTTPYDLSLLARAIIRDTPNEFKIYSEKSFTYNGITQYNRNGLLWDKSLN 120

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DGMKTG T  +G+++V++A +G   LI+V++G    N R   S  LL+ GF        
Sbjct: 121 VDGMKTGHTNNAGYSLVSTATEGKMRLISVVMGTKSPNARKAESKKLLNYGFRFFDTVSP 180

Query: 273 INY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                  + +  +  +       ++++   T       + +     +KE      +K   
Sbjct: 181 NKANAPLVSEKVWMGDTDTVELGVTKDTYVTLPRTQTKDLKASFVINKE-LRAPIKKGEQ 239

Query: 329 LKNK 332
           L   
Sbjct: 240 LGTL 243


>gi|239929347|ref|ZP_04686300.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291437677|ref|ZP_06577067.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291340572|gb|EFE67528.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 429

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 99/283 (34%), Gaps = 26/283 (9%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D  +G V+A +       PAS  K++ A  +     +       
Sbjct: 68  APVLPKDLSARSWIVADAESGEVLAAHNAHWRLAPASTLKMLFADTLLPKWPK---STEH 124

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S  A   P S+    K       + L L +   + + AV +  ++    +K V+ M
Sbjct: 125 RVEVSDMAGVGPGSSMVGIKEEETYTVHDLWLGVFLRSGNDAVHVLSAMNGGVEKTVEEM 184

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  ++ L    TH ++  G    G  ++A D+ +++         +  Y     ++    
Sbjct: 185 NEHAEELQALDTHVVSPDGYDAEGQVSSAYDLTLIARSGLQK-KDFREYCSTVSVKFPGE 243

Query: 196 -----------KGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                         +  NTN        V  + G  G+K G T  +G      A +  + 
Sbjct: 244 TKKNKKGKEVRGSFEIQNTNRLLVGAYDVPVYEGIAGVKNGNTTNAGATFTGVAERDGKV 303

Query: 239 LIAVILGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           L+  ++       N   K +A LL  GF      + +  ++  
Sbjct: 304 LLVTVMNPEKDKGNAVYKETAKLLDWGFAAAGKVEPVGELVPP 346


>gi|322372917|ref|ZP_08047453.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C150]
 gi|321277959|gb|EFX55028.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C150]
          Length = 448

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 76/386 (19%), Positives = 141/386 (36%), Gaps = 52/386 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------------KLPYYTLLDTNTGHVIAE 44
           M++ +V I +     + P LS A+                  +     L+D NTG V+ E
Sbjct: 1   MKKKIVAILLTACLALAPGLSSADELMDITHAAGYTEATEAYRPKSTLLIDGNTGDVLWE 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
              D   +PAS++K MT Y+VF  + + +    T IT +             +N      
Sbjct: 61  ENADEVRDPASMSKAMTLYLVFEAMSKGEISEDTVITATPTDQAIAEIYEISNNKIVAGV 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-- 157
                +      +  S     +           K++  MN  SK LG++ T + NA G  
Sbjct: 121 QYTVSELITMTAVPSSNVTTVMLANYLTNNDPDKWIDKMNEKSKELGMTHTKWYNASGAV 180

Query: 158 -------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                         +   + TTARD+AI+++     +P+ ++Y     + +K        
Sbjct: 181 AVAFKGYYNPQRYDINQTNQTTARDLAIMTYNFIKKYPKILNYTDKPVVTVKKGTPYEET 240

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDR 249
           +    +          G DG+KTG +    FN + +  +GDQ +IAVI+G+         
Sbjct: 241 FETYNYSIPGAKYGIKGVDGLKTGSSPEGAFNYINTIKRGDQRMIAVIMGSGDWSDQTGE 300

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             R+    +L+   + + + +K ++   +        +   ++   V   Q+  I+    
Sbjct: 301 EIRHTFGNALVEKMYKDFSYKKVLSKGEQKI-DGKKYDVAKDVYATVKKGQEPKISVKDD 359

Query: 310 MKEAKDKESHFIDFEKITLLKNKITK 335
                +         K T +K    K
Sbjct: 360 QIVVDNGLKTVSPKIKATSVKATKVK 385


>gi|229177783|ref|ZP_04305157.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
 gi|229189457|ref|ZP_04316474.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
 gi|228594048|gb|EEK51850.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
 gi|228605747|gb|EEK63194.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
          Length = 405

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG V+ +    H   PAS TK++TA ++    K     
Sbjct: 14  VAPPPAEGPNVFSQFATTIDAKTGDVLYDKNAYHRAFPASTTKVLTAILLMEHTK----- 68

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 69  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 128

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 129 FANMMNEKAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITKGVQKYPEILQAMNTKRTT 188

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +                + G KTGFT  +   +V    +    +I+V++ A  R  
Sbjct: 189 VTTSRQTVSIFNKSNFFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIISVVM-ASQRPE 247

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     N     S E+   + E  N  T
Sbjct: 248 IYEDLKQMAEYSFGQFTKQMVLDKHNWHQKTTYLNKDVNSELEQSAELMLKKDEGKNVKT 307

Query: 309 QMKEAK 314
             + A 
Sbjct: 308 IFRAAS 313


>gi|300763430|ref|ZP_07073428.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           N1-017]
 gi|300515707|gb|EFK42756.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           N1-017]
          Length = 272

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVKNGKPLYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDETLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MN  +  L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKKMNRQATKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T+F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSRTNFVSASGLDVDGKTAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDEGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|238749857|ref|ZP_04611361.1| D-alanyl-D-alanine endopeptidase [Yersinia rohdei ATCC 43380]
 gi|238711786|gb|EEQ04000.1| D-alanyl-D-alanine endopeptidase [Yersinia rohdei ATCC 43380]
          Length = 311

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/248 (24%), Positives = 97/248 (39%), Gaps = 12/248 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T  VI  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 38  APLELASGSAMVIDLQTNKVIYANNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 93

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F++ MN 
Sbjct: 94  VDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFIKAMNA 153

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YMHYFQIKGLEIKGKK 199
            +K+LG++ T ++   G+    + +TARD+  L    K       +     K    +   
Sbjct: 154 KAKSLGMTKTRYVEPTGL-SIENVSTARDLTKLLVATKQYPLIGQLSTTTEKMATFREPN 212

Query: 200 Y----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           Y     NTN  V          KTGFT  +G  +    + G++ +  V+L A  + T   
Sbjct: 213 YTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVALVVLDAFGKYTHFA 272

Query: 255 VSASLLSM 262
            +  L S 
Sbjct: 273 DANRLRSW 280


>gi|254824823|ref|ZP_05229824.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|293594063|gb|EFG01824.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
          Length = 272

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEPLYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|229160328|ref|ZP_04288326.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
 gi|228623052|gb|EEK79880.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
          Length = 407

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 70/306 (22%), Positives = 124/306 (40%), Gaps = 13/306 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        +   +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFAATVDAKTGDMLYDKNARHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETIDRNTALMILMVLSANDVSFAIAEHIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++  ++            +  
Sbjct: 131 FANMMNEKAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITRGVQKYPEILQAMNTKRIS 190

Query: 194 -EIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                +     N +       + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSRQTVSIFNKSTYFENPYSMGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F     +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 IYEDLKQMAEYSFGQFVKQTVLDKQSWHQKTTYLNKDIDSELEKSAELMLKKDEGKNVRT 309

Query: 309 QMKEAK 314
             + A 
Sbjct: 310 IFRAAS 315


>gi|228908280|ref|ZP_04072125.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
 gi|228851321|gb|EEM96130.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           200]
          Length = 338

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 16/281 (5%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKDEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAI 172
           N  A+A+AE +   E  F   MN  +K L L            +        TTA D A 
Sbjct: 124 NRSALALAEHIAGNEDNFTMLMNKKAKELKLLQPSPFLNSTGINHDTNKQSTTTAIDAAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+ R+  DFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 244 NYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 284


>gi|228926407|ref|ZP_04089479.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229120916|ref|ZP_04250158.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|228662576|gb|EEL18174.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|228833231|gb|EEM78796.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 407

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEGKNVK 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TTFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|238854687|ref|ZP_04645017.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 269-3]
 gi|282932922|ref|ZP_06338319.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 208-1]
 gi|238832477|gb|EEQ24784.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 269-3]
 gi|281302957|gb|EFA95162.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 208-1]
          Length = 395

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 129/381 (33%), Gaps = 46/381 (12%)

Query: 1   MRQF-----------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++F           L II +  LS      +  ++       ++D  TG ++ +     
Sbjct: 1   MKRFWDKLGLAGIVVLWIIGIINLSFFNIVKADVQSVNAKAAFMMDEKTGQILYQRNATK 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +  ASLTK++T  V+   + + K      I ISK+ ++                   ++
Sbjct: 61  KYAVASLTKILTLAVIMEDIHKHKLDWDQEIQISKDVAKVADDWHFSNVPLVYNERYTVR 120

Query: 110 LLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            LI       A    E    +   +   F   M   +K  G+      N  G+       
Sbjct: 121 SLIESMMIVSADGSTEALALADAGSVAAFNYKMKVVAKRAGVKNPEIYNMIGLSNGELGD 180

Query: 159 -------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      +  +A+DMA++S  +   +P+ ++  + K    K ++          ++
Sbjct: 181 LKLPKIDDNQENQFSAKDMALVSKYLIDKYPEVLNITKTKYANFKIRQDNEMKMENIIYM 240

Query: 212 -----------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-RNKVSASL 259
                        DG+KTG T A+G+  V +    ++ +I V+L      + +   + ++
Sbjct: 241 LEGMGYGPKKGTMDGLKTGKTDAAGYCYVGTGTFDNRRVITVVLDVPGEYSNQFIQTNNM 300

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK-----EAK 314
           +   F      K     +   YQ+          +     +K+   +  + +       K
Sbjct: 301 IDTVFDKYQLVKVDKNNLPKKYQKITITSKKQKKKISVVPEKDSALWLQKKQNLSSLTPK 360

Query: 315 DKESHFIDFEKITLLKNKITK 335
                    +K +++   + K
Sbjct: 361 LIVKEQNKVKKGSIVAKLVYK 381


>gi|187935697|ref|YP_001886551.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723850|gb|ACD25071.1| putative D-alanyl-D-alanine carboxypeptidase DacB [Clostridium
           botulinum B str. Eklund 17B]
          Length = 289

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 29/296 (9%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYP 47
           MR+       + ++   ML  IF   ++A                 LD  +  V+ E   
Sbjct: 1   MRKTIKNYIVITMLLSIMLFQIFSKAALADSKLKDNFRVNARCAIALDRESKEVLFEQNA 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                 AS TK++TA +           L   + ISK A+    S   +K G  + L   
Sbjct: 61  YEIVPMASTTKILTAIIAIEQ-----GDLDKKVVISKKAASIRGSKVGYKAGEEIRLKEL 115

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
              L+ KS ND A+AIAE+L  + + F Q MN+ +  +G+  +HF + HG+  + HY++A
Sbjct: 116 AFGLMFKSGNDAAIAIAETLGGSVEGFAQIMNHYATGIGIIDSHFESPHGLDSNSHYSSA 175

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKG---KKYPNTNWAVGTFLGADGMKTGFTCAS 224
            D+AIL+ +              +  + K    + Y N N  +     A+G+KTG+T  +
Sbjct: 176 YDLAILTAKGMEYDLFREIVGSKQISKEKYDFTRDYNNINKILWLIPEANGVKTGYTGGA 235

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM-----GFYNKTDRKKINY 275
           G  +V+S     + +I V+L   D   R   +  + +       F N   ++ +  
Sbjct: 236 GKCLVSSVNHKGKDIIIVVLNCPD---RWAQTQKIYNHILETVAFENHNIKELVYK 288


>gi|328945504|gb|EGG39655.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1087]
          Length = 451

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 80/384 (20%), Positives = 149/384 (38%), Gaps = 58/384 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           M++ L+++ +A L+++ P  + A+                   +     ++D +TG V+ 
Sbjct: 1   MKKKLLLLGIAFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVW 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKK 98
           E+  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N     
Sbjct: 61  EDNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAG 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 +     ++  S     +            F+  MN  ++ LG++ T + NA G 
Sbjct: 121 VDYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGA 180

Query: 159 VQH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+AIL++      P+ ++Y     + +K       
Sbjct: 181 AAVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEE 240

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +    
Sbjct: 241 TFETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDG 300

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKE 302
              R+    +L+   + +   +K ++   ++   Q           V   +E     +  
Sbjct: 301 EYYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENN 360

Query: 303 IINYNTQMKEAKDKESHFIDFEKI 326
           ++     +K    K S  +  EK+
Sbjct: 361 VLKAENGLKTLSSKISDEMKVEKV 384


>gi|254851885|ref|ZP_05241233.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|258605180|gb|EEW17788.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
          Length = 272

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVKNGKPLYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDETLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MN  +  L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKKMNRQATKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T+F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSRTNFVSASGLDVDGKTAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDEGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|228913946|ref|ZP_04077571.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228944975|ref|ZP_04107336.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228814644|gb|EEM60904.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228845885|gb|EEM90911.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 407

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    ++ V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIVNVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEGKNVK 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TTFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|238757296|ref|ZP_04618483.1| D-alanyl-D-alanine endopeptidase [Yersinia aldovae ATCC 35236]
 gi|238704674|gb|EEP97204.1| D-alanyl-D-alanine endopeptidase [Yersinia aldovae ATCC 35236]
          Length = 311

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 98/261 (37%), Gaps = 10/261 (3%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A A                     ++D  T  VI  N  D     AS+TKLMTA VV  
Sbjct: 24  LATASGGTAVAKGKAPLELASGSAMVVDLQTNKVIYANNIDEVVPIASITKLMTAMVVLD 83

Query: 68  FLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K  L   I++  + ++      S  +  S ++  + L L ++ S N  A ++A  
Sbjct: 84  A----KLPLDEVISVDIHQTKELKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHH 139

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
                  F++ MN  +K+LG++ T ++   G+  +   T      +L    +      + 
Sbjct: 140 YPGGYNAFIKAMNAKAKSLGMTHTRYVEPTGLSINNVSTARDLTKMLMASKQYPLIGQLS 199

Query: 187 YFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               K    +   Y     NTN  V          KTGFT  +G  +    + G++ +  
Sbjct: 200 TTTEKMATFREPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVAL 259

Query: 242 VILGALDRNTRNKVSASLLSM 262
           V+L A  + T    +  L S 
Sbjct: 260 VVLDAFGKYTHFADANRLRSW 280


>gi|327478643|gb|AEA81953.1| D-alanyl-D-alanine endopeptidase [Pseudomonas stutzeri DSM 4166]
          Length = 312

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 12/266 (4%)

Query: 5   LVIIAMAMLSNIFPFLSIA--ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           L+   +A L  I    +    +        L+D NT  V+  + PD     AS+TKLMTA
Sbjct: 10  LLFACLASLPVIHAQAAKPMVQELASGSALLVDLNTNEVLYSSNPDMVVPIASVTKLMTA 69

Query: 63  YVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            VV          L   + ++ ++A E     S  + GS ++    L L ++ S N  A 
Sbjct: 70  MVVLDAK----LPLDQALPVTIRDAKEMQGVYSRVRIGSEISRREMLLLTLMSSENRAAA 125

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           ++A         F+Q MN  ++ LG+S TH++   G+ +    +    + ++    +   
Sbjct: 126 SLAHHYPGGYAAFIQAMNAKARALGMSRTHYVEPTGLSERNVSSANDLVKLIRASRQYPL 185

Query: 182 PQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGD 236
            Q       K +  +   Y     NTN  V          KTGFT A+G  +V S     
Sbjct: 186 IQQFSTTDEKTVAFRKPNYTLGFRNTNALVRKNNWDIQLSKTGFTNAAGHCLVMSTTMKQ 245

Query: 237 QSLIAVILGALDRNTRNKVSASLLSM 262
           + +  V+L A  + T    +  L   
Sbjct: 246 RPVAFVVLDAFGKYTHMADANRLKKW 271


>gi|300782776|ref|YP_003763067.1| D-alanyl-D-alanine carboxypeptidase [Amycolatopsis mediterranei
           U32]
 gi|299792290|gb|ADJ42665.1| D-alanyl-D-alanine carboxypeptidase [Amycolatopsis mediterranei
           U32]
          Length = 414

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 14/260 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L      L+  + N    + + D +TG V+A   P     PASL K + A VV       
Sbjct: 81  LVTPSGALNPPDGNTAASWLVQDLDTGAVVAAKDPHARQRPASLIKTLLALVV-----VT 135

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +      I  +K  +E   +      G   T+D  L  L++ S ND+A   A +L   + 
Sbjct: 136 QLDPQQTIVATKEDAEQECTCVGLVAGGQYTVDQLLHGLLMHSGNDVAHVFATALGGPDS 195

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
              + MN  +  +G   T      G+   G  T+A D++++        P++      K 
Sbjct: 196 AVAK-MNALAAKIGALDTRAATPSGLDGPGMSTSAYDLSLIFNY-AMKQPEFAKVVATKN 253

Query: 193 LEIKG------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            E             N N  +G + G  G KTGFT  +    V +A +  + L  V+L A
Sbjct: 254 FEFPPAGGKPAIPIFNDNKLLGVYPGFLGGKTGFTDDARHTYVGAAQRKGKRLAVVMLRA 313

Query: 247 LDRNTRNKV-SASLLSMGFY 265
             + T+    +A LL  GF 
Sbjct: 314 EQKPTKVVDQAAKLLDYGFA 333


>gi|145490887|ref|XP_001431443.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398548|emb|CAK64045.1| unnamed protein product [Paramecium tetraurelia]
          Length = 302

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 19/263 (7%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA-MLTTPIT 81
           A       + ++D+ +G V+     +     AS+TK+MT YVV +  +        T   
Sbjct: 38  APRITAKSWIIVDSQSGDVLYSFNENQKREIASITKIMTFYVVLNMCRTMNVQTNNTYAE 97

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--------- 132
           +S  AS    + +   KG  +++++    L++ S ND A+A+AE+               
Sbjct: 98  VSFQASSVGGTTADLLKGDVVSIEDLFYGLMLPSGNDAAMALAENFGIYAMYQNKIKGKN 157

Query: 133 ---KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---- 185
               F+Q MNN ++ L +S T + N HG+    + ++A D+A L  ++  D         
Sbjct: 158 PLIYFIQEMNNKARELRMSQTTYANPHGLNNKNNVSSAYDVAKLCNQLLKDEFFRKVVNT 217

Query: 186 --HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             H+  I+  E   +     N     + G  G+KTG T  +G  + +     ++S   VI
Sbjct: 218 KVHFSTIQDEEGFTRDVIWENTNKLLYQGFKGIKTGNTSVAGPCLASYYQTANRSFTIVI 277

Query: 244 LGALDRNTRNKVSASLLSMGFYN 266
           LG  ++  R   +  LL      
Sbjct: 278 LGCRNQEDRWSETMQLLQWCLSQ 300


>gi|254518751|ref|ZP_05130807.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           7_2_43FAA]
 gi|226912500|gb|EEH97701.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           7_2_43FAA]
          Length = 389

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 18/316 (5%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                      +D  +  V+           AS TK++T+ +  ++       L   +TI
Sbjct: 60  PLKVSARNAIAIDAESRQVLWNQKGYEIVPMASTTKILTSLIAINY-----GDLDRIVTI 114

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           SKNAS    S   +K G  +T+   L  L+ +S ND A+AIAE +  + + F   MN+ +
Sbjct: 115 SKNASSIRGSTVGYKAGEKITMRELLFGLMFRSGNDAAIAIAEDIGGSVENFSNIMNDFA 174

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIKGKK 199
           ++LG+  +HF + HG+    HY++A D+AIL+ +                 K      + 
Sbjct: 175 RSLGIIDSHFESPHGLDSAKHYSSAYDLAILTAKGMEYDVFREIVGEKVIYKDKYNFTRD 234

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           Y N N  +    GA+G+KTG+T  +G  +V+S     +++I V+L  +D   R  V+  +
Sbjct: 235 YQNINKILYRIPGANGVKTGYTGGAGKCLVSSVNHNGRNIIIVVLNCVD---RWNVTEKI 291

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            +      T  +  N  I           +    E++    KE      ++         
Sbjct: 292 FNYVISTNTFAEISNKDILQRENLAGLGNIIQ-EEDITYGYKEKDIVEVEVFNRSS---- 346

Query: 320 FIDFEKITLLKNKITK 335
             D E   +L     K
Sbjct: 347 --DVETGDILGKISVK 360


>gi|171059568|ref|YP_001791917.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Leptothrix
           cholodnii SP-6]
 gi|170777013|gb|ACB35152.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Leptothrix
           cholodnii SP-6]
          Length = 323

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   K     ++D  T  V+    P      ASLTKLMTA VV    +     L   + +
Sbjct: 61  ALDLKSSVAFVIDQETSEVLFSKNPQAVLPIASLTKLMTALVVVEAGQP----LDEILEV 116

Query: 83  SKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           S+   +    + +     + +T ++ L L ++ S N  A A+          FV  MN  
Sbjct: 117 SEADVDTEKFSRSRLAVGTRLTREDMLHLALMSSENRAAHALGRHFPGGLNAFVDAMNFK 176

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG--KK 199
           + +LG++ TH++   G+      +      ++         +         +E+     +
Sbjct: 177 AASLGMADTHYVEPTGLSSRNQASAPDLARLVKAAYAYPLLRDFSTTPEAEVEVGRRTMQ 236

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           + NTN  +       G  KTG+   +G  +V  A    + LI V L +  + +R   +  
Sbjct: 237 FRNTNGLIRNPTWDIGLQKTGYIVEAGRCLVMQAKFAGRQLIMVFLDSTGKYSRLGDAER 296

Query: 259 LLSM 262
           +   
Sbjct: 297 VRRW 300


>gi|125717597|ref|YP_001034730.1| DD-carboxypeptidase [Streptococcus sanguinis SK36]
 gi|125497514|gb|ABN44180.1| DD-carboxypeptidase, putative [Streptococcus sanguinis SK36]
          Length = 451

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/384 (20%), Positives = 148/384 (38%), Gaps = 58/384 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           M++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ 
Sbjct: 1   MKKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVW 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKK 98
           E+  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N     
Sbjct: 61  EDNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAG 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 +     ++  S     +            F+  MN  ++ LG++ T + NA G 
Sbjct: 121 VDYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGA 180

Query: 159 VQH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+AIL++      P+ ++Y     + +K       
Sbjct: 181 AAISFKGYYNPQNYDNTLSNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEE 240

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +    
Sbjct: 241 TFETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDG 300

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKE 302
              R+    +L+   + +   +K ++   ++   Q           V   +E     +  
Sbjct: 301 EYYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENN 360

Query: 303 IINYNTQMKEAKDKESHFIDFEKI 326
           ++     +K    K S  +  EK+
Sbjct: 361 VLKAENGLKTLSSKISDEMKVEKV 384


>gi|238763822|ref|ZP_04624780.1| D-alanyl-D-alanine endopeptidase [Yersinia kristensenii ATCC 33638]
 gi|238697952|gb|EEP90711.1| D-alanyl-D-alanine endopeptidase [Yersinia kristensenii ATCC 33638]
          Length = 311

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 93/247 (37%), Gaps = 10/247 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T  VI  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 38  APLELASGSAMVVDLQTNKVIYANNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 93

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F++ MN 
Sbjct: 94  VDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFIKAMNA 153

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K+LG++ T ++   G+  +   T      +L    +      +     K    +   Y
Sbjct: 154 KAKSLGMTNTRYVEPTGLSINNVSTARDLTKLLIATKQYPLIGQLSTTTEKMATFRDPNY 213

Query: 201 ----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V          KTGFT  +G  +    + G++ +  V+L A  + T    
Sbjct: 214 TLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVALVVLDAFGKYTHFAD 273

Query: 256 SASLLSM 262
           +  L S 
Sbjct: 274 ANRLRSW 280


>gi|304395773|ref|ZP_07377656.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pantoea sp.
           aB]
 gi|304357067|gb|EFM21431.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pantoea sp.
           aB]
          Length = 347

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 106/279 (37%), Gaps = 20/279 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           +R  L+ +A+ +   I    + A                     ++D  T  V+  ++PD
Sbjct: 37  IRFTLLSLALLVSGQIVSLPAQATTTLSQLAPIAQPQIASGSAMIVDLTTNKVLFSSHPD 96

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV    +    M+   I+ +          S  K  S ++  N +
Sbjct: 97  RVRPIASITKLMTAMVVLDAHQPMNEMIPVDISQTPE---MRGVFSRVKLNSQISRRNMM 153

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A +       F++ MN  +++LG+  T ++   G+      +   
Sbjct: 154 LLALMSSENRAAASLAHAYPGGYNAFIRAMNAKARSLGMKQTRYVEPTGLSTQNVSSAQD 213

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
            + +L    +      +   + +        Y     NTN  V          KTG+T  
Sbjct: 214 LVKLLKATREYPELGALSTTKEETAVFAHPSYALPFRNTNHLVYKNDWHIQLTKTGYTDE 273

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V   +  ++ +  V+L A  + T    +  L S 
Sbjct: 274 AGHCLVMRTMINNRPVALVVLDAFGKYTHFADANRLRSW 312


>gi|86739377|ref|YP_479777.1| Serine-type D-Ala-D-Ala carboxypeptidase [Frankia sp. CcI3]
 gi|86566239|gb|ABD10048.1| Serine-type D-Ala-D-Ala carboxypeptidase [Frankia sp. CcI3]
          Length = 551

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/284 (19%), Positives = 107/284 (37%), Gaps = 12/284 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +         + + D  +G ++A   P     PAS  K++TA  V            
Sbjct: 93  SDSAPPAGLTAAEWLVADAGSGAILAAYRPHAQDLPASTMKILTALTVLP-----GLPPD 147

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +T+ +NA     +      G   T+ +    +++ S ND  +A+ ++   T    +Q 
Sbjct: 148 RVVTVDENAPRVDGTKVGLVPGVGYTVRDLATAMLISSGNDATMALVQASGGT-PAVLQR 206

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK- 196
           MN  +++LG + T   +  G+   G  T+  D+A+L      +     +    +      
Sbjct: 207 MNALARSLGATDTVAGDPTGLDSPGQVTSVHDLAVLGRAALDNPTVRGYLTIPRASLAGR 266

Query: 197 ---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                +  N N  + ++ G  G+K G+T A+G   V +A +G  +LI  +L         
Sbjct: 267 GSTRFEIQNHNALLRSYEGTIGVKNGYTIAAGATFVGAATRGGHTLIVALL--RTAPAYG 324

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
           K + +LL  GF +      + Y+         S+        + 
Sbjct: 325 KDARALLDWGFAHADTVTPVGYLANPGATAAASSGPAGDRPSIS 368


>gi|300691350|ref|YP_003752345.1| D-alanyl-D-alanine carboxypeptidase [Ralstonia solanacearum PSI07]
 gi|299078410|emb|CBJ51061.1| D-Alanyl-D-alanine carboxypeptidase [Ralstonia solanacearum PSI07]
          Length = 374

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D  +G V+ +         AS+TKLMTA VV    +     +  
Sbjct: 94  ATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDTHQP----MDE 149

Query: 79  PITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + I+++  +Y  +  +  +  + +T ++ L L ++ S N  A A+  +       FV  
Sbjct: 150 LLEITEDDRDYERNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAA 209

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  LG++ TH+++++G+      +      I+    K    +         +   G
Sbjct: 210 MNRKAHELGMNDTHYVDSNGLSSSNVSSATDLAKIVMAAYKVPLIRQFTTTAEHTVNANG 269

Query: 198 KKYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +     NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR  
Sbjct: 270 RTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFA 329

Query: 255 VSASLLSM 262
            +A + + 
Sbjct: 330 DAARVRNW 337


>gi|327489460|gb|EGF21253.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1058]
          Length = 451

 Score =  128 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 79/384 (20%), Positives = 147/384 (38%), Gaps = 58/384 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           M++ L+++ +A L+++ P  + A+                   +     ++D +TG V+ 
Sbjct: 1   MKKKLLLLGIAFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVW 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKK 98
           E+  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N     
Sbjct: 61  EDNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAG 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 +     ++  S     +            F+  MN  ++ LG++ T + NA G 
Sbjct: 121 VDYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGA 180

Query: 159 VQH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+AIL++      P+ + Y     + +K       
Sbjct: 181 AAVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILDYTNKAKVTVKAGTPYEE 240

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DGMKTG +    FN +A+  + DQ +IAVI+G  D +    
Sbjct: 241 TFETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKREDQRMIAVIMGVGDWSDQDG 300

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKE 302
              R+    +L+   + +   +K ++   ++   Q           V   +E     +  
Sbjct: 301 EYYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENN 360

Query: 303 IINYNTQMKEAKDKESHFIDFEKI 326
           ++     +K    K S  +  EK+
Sbjct: 361 VLKAENGLKTLSSKISDEMKVEKV 384


>gi|229060227|ref|ZP_04197596.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|228719109|gb|EEL70721.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
          Length = 338

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 12/274 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  I  A++   F         +     L+DTN+G ++ +     P   A+L+KLMT Y
Sbjct: 11  LLSFIITALIVLYFYLYVNGPIIQAKSALLIDTNSGEIVYKKNESTPIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L + K  L   + IS +  +   S          T+ + L  L++   N  A+ +
Sbjct: 71  IVMEQLHDGKIQLDESVQISNDVFQTETSPIHVTSNDKTTVRDLLNTLLLTGNNCSALEL 130

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSWRIKT 179
           AE +   E  F   MN  +K L LS      N+ GV    +    TT  D+A L+ ++  
Sbjct: 131 AEHIAGNEANFTMLMNEKAKQLKLSQPSPFLNSTGVNNEKNKQSITTTIDVANLAAQLVK 190

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFNIVAS 231
           DFP  +   ++   +   K +   N     +         G DG++T  +    ++ V +
Sbjct: 191 DFPDVLSITKLTSYQFNFKDFQVFNTNKMIYSLNENIKLQGVDGLQTSLSTNGNYSFVGT 250

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A QGD   I+V+L A + NT    +  LL  GF 
Sbjct: 251 AKQGDTRFISVVLDANEENTAFVETKKLLQYGFE 284


>gi|297584338|ref|YP_003700118.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           selenitireducens MLS10]
 gi|297142795|gb|ADH99552.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Bacillus
           selenitireducens MLS10]
          Length = 363

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 10/272 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           VI+   ++  + P    AE       Y ++D  TG ++          PASLTK+ TA +
Sbjct: 13  VILFTGIMVMLMPIQISAEDEVVSEAYAVIDAKTGTLLDGKNHREEMYPASLTKIATAVI 72

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                      L   +TIS  A     +    ++G ++T++  L  +++ SAND ++A+A
Sbjct: 73  AIEH-----LDLDEEVTISNKAIHADGTRVYLEEGESLTVEQLLYGIMISSANDASIALA 127

Query: 125 ESLCKTEKKFVQHMNNTSKN-LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           E +  + + F + MN   +N +GL  T+F N HG+    H TTA DMA +      +   
Sbjct: 128 EHIAGSVEAFSRLMNTYIQNEIGLENTYFTNPHGLFDEEHVTTAEDMARIMKYALENDTY 187

Query: 184 YMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                +               + +     +      K GF   SG  +  S IQ    LI
Sbjct: 188 RELAEKTDYHWQSEGWDTRIFHHHAMRRHYDFVTAGKNGFVSQSGLTLATSGIQDQTELI 247

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            V L A  R+     + +L    F        
Sbjct: 248 VVNLNAPSRSRIVSDTLTLFERNFDLYETVTI 279


>gi|260663920|ref|ZP_05864773.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus jensenii
           SJ-7A-US]
 gi|260561806|gb|EEX27775.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus jensenii
           SJ-7A-US]
          Length = 397

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 129/381 (33%), Gaps = 46/381 (12%)

Query: 1   MRQF-----------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++F           L II +  LS      +  ++       ++D  TG ++ +     
Sbjct: 3   MKRFWDKLGLAGIVVLWIIGIINLSFFNIVKADVQSVNAKAAFMMDEKTGQILYQRNATK 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +  ASLTK++T  V+   + + K      I ISK+ ++                   ++
Sbjct: 63  KYAVASLTKILTLAVIMEDIHKHKLDWDQEIQISKDVAKVADDWHFSNVPLVYNERYTVR 122

Query: 110 LLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            LI       A    E    +   +   F   M   +K  G+      N  G+       
Sbjct: 123 SLIESMMIVSADGSTEALALADAGSVAAFNYKMKVVAKRAGVKNPEIYNMIGLSNGELGD 182

Query: 159 -------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      +  +A+DMA++S  +   +P+ ++  + K    K ++          ++
Sbjct: 183 LKLPKIDDNQENQFSAKDMALVSKYLIDKYPEVLNITKTKYANFKIRQDNEMKMENIIYM 242

Query: 212 -----------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-RNKVSASL 259
                        DG+KTG T A+G+  V +    ++ +I V+L      + +   + ++
Sbjct: 243 LEGMGYGPKKGTMDGLKTGKTDAAGYCYVGTGTFDNRRVITVVLDVPGEYSNQFIQTNNM 302

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK-----EAK 314
           +   F      K     +   YQ+          +     +K+   +  + +       K
Sbjct: 303 IDTVFDKYQLVKVDKNNLPKKYQKITITSKKQKKKISVVPEKDSALWLQKKQNLSSLTPK 362

Query: 315 DKESHFIDFEKITLLKNKITK 335
                    +K +++   + K
Sbjct: 363 LIVKEQNKVKKGSIVAKLVYK 383


>gi|188534373|ref|YP_001908170.1| D-alanyl-D-alanine endopeptidase [Erwinia tasmaniensis Et1/99]
 gi|188029415|emb|CAO97292.1| Penicillin-binding protein 7 (D-alanyl-D-alanine-endopeptidase)
           [Erwinia tasmaniensis Et1/99]
          Length = 316

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/291 (18%), Positives = 101/291 (34%), Gaps = 18/291 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +           ++D N+  VI E++PD     AS+TKLMT  V           L  
Sbjct: 35  SSAAQPAIASGSAMIVDLNSNKVIYESHPDRVRPIASITKLMTVMVALDA----HLPLDE 90

Query: 79  PITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + +   +  E     S  +  S ++  N + L ++ S N  A ++A         F++ 
Sbjct: 91  MLKVDVSHTPEMRGVYSRVRLNSEISRKNMMLLALMSSENRAAASLAHHYPGGYDAFIRA 150

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN  ++ LG+S T ++   G+    + +TARD++ L      + +               
Sbjct: 151 MNAKARALGMSHTRYVEPTGL-SIENVSTARDLSKLLLATKRYPLIGQLSTTHEDMASFR 209

Query: 193 LEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  + NTN  V          KTG+T  +G  +V   +   + +  V+L A  + T
Sbjct: 210 SPNYTLPFRNTNHLVYRPDWNIQLTKTGYTDEAGHCLVMRTVINQRPVSLVVLDAFGKYT 269

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN--EVPNISEEVCTTQ 300
               +  L           K           +         N+  +    +
Sbjct: 270 HFADANRLRQW----IETGKVSAVPPAALSYKKDKAARVANNVRADDSVPE 316


>gi|315186124|gb|EFU19886.1| Serine-type D-Ala-D-Ala carboxypeptidase [Spirochaeta thermophila
           DSM 6578]
          Length = 387

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 14/316 (4%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNAS 87
            LL+  T  V+ E   D P   ASLTKL+TAY+    +++        + +     +   
Sbjct: 28  FLLEPTTRTVLYEKQADLPHPAASLTKLVTAYLALQAVEDGLLQEDALLPVPSALARIPF 87

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S +    G+T+T    L L ++ SAND A A+A  L      F   MN     +G 
Sbjct: 88  PPDASLAGLAPGTTLTPAQLLSLTLIYSANDAAYALALLLAPDIPAFASRMNRLVHAMGY 147

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
           +   F    G+      T        +  +         Y   + L + G+ Y N N  +
Sbjct: 148 THLFFEEPSGLSPRNTITAREIALFAADYLDRFPSAPARYHAPRALTVGGRTYLNRNTLL 207

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDRNTRNKVSASLLS 261
           G + G +G+KTG+   SGF+IVA A +G  SLIAV+LG            R++ +A+LL 
Sbjct: 208 GRYPGLEGLKTGYLEESGFHIVAYARRGPTSLIAVLLGIQAPGYWEGMQERDRQAAALLD 267

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE----EVCTTQKEIINYNTQMKEAKDKE 317
            GF      +     I+       ++            V   + ++   + ++++  ++ 
Sbjct: 268 YGFDTYLTTEPPLTGIRPVRIWGGTHSTLTPRPARPLRVTLARTDLPRLSVEVEQVSERW 327

Query: 318 SHFIDFEKITLLKNKI 333
           +     E++  ++  +
Sbjct: 328 APLHPGERLGTVRLLL 343


>gi|315121863|ref|YP_004062352.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495265|gb|ADR51864.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 357

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 98/316 (31%), Positives = 153/316 (48%), Gaps = 9/316 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R    I+ + ++       S A+        ++D            D    PASLTK+M
Sbjct: 30  LRSLWKILLLCIILTSMALKSHAKLE--YSSIVIDLLNDKRTNGFKQDKLRYPASLTKMM 87

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y++F  L+ KK  L T I +SK A+  PPS    K+ +  T++  +  LI +SAND++
Sbjct: 88  TLYIIFEHLQSKKMHLNTKIPVSKTATIQPPSKLYLKENTFFTVEQGILALITRSANDVS 147

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A  E +  +EKKF   M+N +K+LG++ T + NA G+      TTARD AIL   I+ +
Sbjct: 148 TAFGEFISGSEKKFAILMSNKAKSLGMNHTTYKNASGLHDKNQKTTARDQAILGITIRKN 207

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           FPQY  YF I+  + + K   N N  +    G DG+KTG+T  SGFNIVAS    + S+I
Sbjct: 208 FPQYYKYFSIRKFQYRNKIILNHNKLINKIHGIDGIKTGYTRDSGFNIVASLQNENNSII 267

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           AV++G      R++ +  L++  F N                ++ +       + + T +
Sbjct: 268 AVVMGMPTCQKRDQKALELIN-SFLN------TKKTKHKPIWKSGNLTFSPTMKALITEK 320

Query: 301 KEIINYNTQMKEAKDK 316
            +  N     K    K
Sbjct: 321 IKDSNQQLPKKYPVQK 336


>gi|283785939|ref|YP_003365804.1| penicillin-binding protein 7 [Citrobacter rodentium ICC168]
 gi|282949393|emb|CBG89005.1| penicillin-binding protein 7 [Citrobacter rodentium ICC168]
          Length = 308

 Score =  128 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 106/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V I    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRVSILSLALMLAVPFAPQAAVKATATTVASQPEIASGSAMIVDLNTNKVIYANHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV          L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGIYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG+S T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYNAFIKAMNAKAKALGMSHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTRLLIASKQYPLIGQLSTTREDMATFSNPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTLINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|229057005|ref|ZP_04196399.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|228720282|gb|EEL71858.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
          Length = 407

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 15/326 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDMLYDKNAQHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAEHIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNERAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITRGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSTQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 IYEDLKQMTEYSFGQFTKQTVLDKHSWHQKTTYLNKDVDSELENSAELMLKKDEGKNVKT 309

Query: 309 QMKEAKDKESHFIDFEKITLLKNKIT 334
             +   +       ++K       + 
Sbjct: 310 AFRV--NSVDKEALYQKGIHRGEVVG 333


>gi|159038233|ref|YP_001537486.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora arenicola
           CNS-205]
 gi|157917068|gb|ABV98495.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora arenicola
           CNS-205]
          Length = 416

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 111/297 (37%), Gaps = 20/297 (6%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                            + + D +TG V+    P     PAS+ KL+ A  +       +
Sbjct: 75  LVTPAGGPQPPGVTATSWLVADLDTGQVLGACGPHEHGTPASVQKLLLAAALMP-----R 129

Query: 74  AMLTTPITISKNASEYPPSNSTFK--KGSTMTLDNALKLLIVKSANDIAVAIAE--SLCK 129
                 +T++K   +    +S      G    ++     L+++S N+ A  +A      +
Sbjct: 130 LDPQQVVTVTKEDLDIERGSSAVGLLAGGRYPVETVWLGLLLQSGNEAANVLARLGGGAE 189

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
                V+ MN  ++ LG   TH     G+   G +T+A D+A+++     D     +   
Sbjct: 190 GRAGGVRAMNEFAEYLGARQTHAATPSGLDGPGQFTSAYDLALIARVCFADPTFRRYALT 249

Query: 190 IKGLEI-------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                        KG +  N N  VG + GA G KTGFT  +    V +A +  + L+  
Sbjct: 250 ETHRIPAQEQLGKKGFQIQNGNPLVGRYPGALGGKTGFTSLARHTYVGAAERDGRRLVVT 309

Query: 243 ILGALDRNTR-NKVSASLLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           +LGA  R  R  +  A LL  GF    + +  + +             +  P ++ +
Sbjct: 310 LLGAESRPMRGWEQGAVLLDWGFALPRDASVGRLVEPGQPTPTPTQSPSVTPPMAAD 366


>gi|187929017|ref|YP_001899504.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ralstonia
           pickettii 12J]
 gi|187725907|gb|ACD27072.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ralstonia
           pickettii 12J]
          Length = 396

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 10/253 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D N G V+ +         AS+TKLMTA VV    +    +L  
Sbjct: 116 STPDALALRSSVALVMDQNNGEVLFQKNSSAVLPIASITKLMTALVVTDAHQPMDELLEI 175

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                ++      + S  + G+ +T ++ L L ++ S N  A A+  +       FV  M
Sbjct: 176 TD---EDRDYERNTGSRLRFGTMLTREDLLLLALMSSENRAASALGRNYPGGRPAFVAAM 232

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +  LG++ TH+++++G+    + ++A+D+A +        P    +       +   
Sbjct: 233 NRKAHELGMNDTHYVDSNGL-SSSNVSSAQDLAKI-VIAAYKVPLIRQFTTTPEHTVSAN 290

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +   Y NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR 
Sbjct: 291 GRTLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRF 350

Query: 254 KVSASLLSMGFYN 266
             +  + +    N
Sbjct: 351 ADATRVRNWLERN 363


>gi|89894346|ref|YP_517833.1| hypothetical protein DSY1600 [Desulfitobacterium hafniense Y51]
 gi|89333794|dbj|BAE83389.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 364

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 9/285 (3%)

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PAS TK+MT  +       +  +  +   +  + +    +    + G  ++L++ L  
Sbjct: 1   MAPASTTKIMTGLLGIELGNPEDIVTASETML--DYTTVYGTRIYLEPGEQLSLEDMLYA 58

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           L++ SAND AVAIAE +      FV  MN  + +LGL  T F N  G+ + GH TTA D+
Sbjct: 59  LLLNSANDAAVAIAEHISGNTSAFVSLMNQRAADLGLKNTTFKNPSGLNEEGHLTTAHDL 118

Query: 171 AILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           A ++          D+ +   +   +  E    +  N N  +       GMKTG+T  + 
Sbjct: 119 ARIAQAAYANPVFRDYIKTKSHVIPRAKENVPIEMINENKLLWRDDTITGMKTGYTSVAQ 178

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
             +VASA +  + +I VIL +  R        +LL  GF    +             +  
Sbjct: 179 NCLVASASRDGRDVIGVILKSPGREI-YTDMQALLDYGFEQFENTLYKGVGDSLGQLEIQ 237

Query: 286 SNEVPNISEE-VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
              V  + ++ +  TQK+              +    +  +  +L
Sbjct: 238 GQPVNLLIDQALWITQKKDNTLPQPRINILPIDGELAEVAEGQVL 282


>gi|294631036|ref|ZP_06709596.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
 gi|292834369|gb|EFF92718.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
          Length = 483

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 95/289 (32%), Gaps = 30/289 (10%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEK 72
                 + +      + + D  +G V+A +       PAS  K++   T    F   ++ 
Sbjct: 121 AAGVPVLPKDLTARSWIVADAESGQVLAAHNAHWRLPPASTLKMLFADTVLPKFPATQQH 180

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K + +    I +N+S      +       + L   L+          AV +  ++     
Sbjct: 181 KVVASDLAGIGENSSMVGIKENESYSVRDLWLGVFLRSGND------AVHVLSAMNGGVA 234

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           + V  MN  +++L    T  ++  G       ++A D+ + +           +   ++ 
Sbjct: 235 QTVADMNAHAQDLQALDTQVVSPDGYDAPNQVSSAYDLTLFARSGLQKKDFRTYCSTVRA 294

Query: 193 L-------------EIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAI 233
                              +  NT+        +  + G  G+K G T  +G      A 
Sbjct: 295 QFPGETKKDKKGKSTRTSFEIQNTDRLLSGDYDISVYPGIAGVKNGNTTNAGATFTGVAE 354

Query: 234 QGDQSLIAVILGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           +G + L+  ++    +  N   + +A L   GF      + +  ++   
Sbjct: 355 RGGRVLLVTVMNPEKKDHNEVYRETAKLFDWGFTAAGKVRPVGELVPPK 403


>gi|262379926|ref|ZP_06073081.1| D-alanyl-D-alanine endopeptidase [Acinetobacter radioresistens
           SH164]
 gi|262298120|gb|EEY86034.1| D-alanyl-D-alanine endopeptidase [Acinetobacter radioresistens
           SH164]
          Length = 352

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 97/253 (38%), Gaps = 14/253 (5%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF--LKEKKA 74
                   +       ++D  TG V+     +     AS+TKLMTA V         ++ 
Sbjct: 99  STSYVNQPSVNARAALVMDAQTGEVLFSKNTNTALPIASITKLMTAVVTSDARLNMSEEI 158

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L     I         ++ST + G  M     L   ++KS N  A A+A +    +  F
Sbjct: 159 TLQPIDFIGPK-----KASSTLRAGDKMNRAEVLLFALMKSENPAAAALARTYPGGKPAF 213

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MN  ++ LG+ +  F  + G+    +  +ARD+ IL     + +     +      +
Sbjct: 214 VAAMNAKARELGMHSAKFYESTGLDA-RNVASARDLGILVS-AASQYGLIRQFSTTPTYD 271

Query: 195 IKGK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                   K  NTN  V       +  KTGF   +G  +V  A    +  I V+LGA D 
Sbjct: 272 FNLGYRVLKSNNTNALVRNGGWNINLSKTGFINEAGRCVVMHATVNQRPAIVVLLGASDT 331

Query: 250 NTRNKVSASLLSM 262
            +RN  +  L S 
Sbjct: 332 QSRNNDATRLFSW 344


>gi|207724146|ref|YP_002254544.1| d-alanyl-d-alanine-endopeptidase (penicillin-binding protein)
           [Ralstonia solanacearum MolK2]
 gi|206589355|emb|CAQ36317.1| d-alanyl-d-alanine-endopeptidase (penicillin-binding protein)
           [Ralstonia solanacearum MolK2]
          Length = 431

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D  +G V+ +         AS+TKLMTA VV    +     +  
Sbjct: 112 ATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDAHQP----MDE 167

Query: 79  PITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + I+++  +Y  +  +  +  + +T ++ L L ++ S N  A A+  S       FV  
Sbjct: 168 LLEITEDDRDYERNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAA 227

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  LG++ TH+++++G+      +      I+    K    +         +   G
Sbjct: 228 MNRKAHELGMNDTHYVDSNGLSSSNVSSAMDLSKIVMAAYKVPLIRQFTTTAEHTVNANG 287

Query: 198 KKYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +     NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR  
Sbjct: 288 RTLHYVNTNRLVRGGEWEIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFA 347

Query: 255 VSASLLSM 262
            +  + + 
Sbjct: 348 DAVRVRNW 355


>gi|22126890|ref|NP_670313.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis KIM 10]
 gi|45440799|ref|NP_992338.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51595561|ref|YP_069752.1| D-alanyl-D-alanine endopeptidase [Yersinia pseudotuberculosis IP
           32953]
 gi|149366829|ref|ZP_01888863.1| penicillin-binding protein 7 precursor [Yersinia pestis CA88-4125]
 gi|162100180|ref|YP_650800.2| D-alanyl-D-alanine endopeptidase [Yersinia pestis Antiqua]
 gi|162139430|ref|YP_648728.2| D-alanyl-D-alanine endopeptidase [Yersinia pestis Nepal516]
 gi|162418831|ref|YP_001605881.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis Angola]
 gi|165924784|ref|ZP_02220616.1| penicillin-binding protein 7 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938339|ref|ZP_02226897.1| penicillin-binding protein 7 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009970|ref|ZP_02230868.1| penicillin-binding protein 7 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211300|ref|ZP_02237335.1| penicillin-binding protein 7 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400360|ref|ZP_02305873.1| penicillin-binding protein 7 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419589|ref|ZP_02311342.1| penicillin-binding protein 7 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423973|ref|ZP_02315726.1| penicillin-binding protein 7 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167466748|ref|ZP_02331452.1| penicillin-binding protein 7 [Yersinia pestis FV-1]
 gi|218928339|ref|YP_002346214.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis CO92]
 gi|229841118|ref|ZP_04461277.1| Murein-DD-endopeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843222|ref|ZP_04463368.1| Murein-DD-endopeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894160|ref|ZP_04509346.1| Murein-DD-endopeptidase [Yersinia pestis Pestoides A]
 gi|229903394|ref|ZP_04518507.1| Murein-DD-endopeptidase [Yersinia pestis Nepal516]
 gi|270487204|ref|ZP_06204278.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis KIM D27]
 gi|294503194|ref|YP_003567256.1| penicillin-binding protein 7 precursor [Yersinia pestis Z176003]
 gi|21959926|gb|AAM86564.1|AE013903_1 penicillin-binding protein 7 [Yersinia pestis KIM 10]
 gi|45435657|gb|AAS61215.1| penicillin-binding protein 7 precursor [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588843|emb|CAH20457.1| penicillin-binding protein 7 precursor [Yersinia pseudotuberculosis
           IP 32953]
 gi|115346950|emb|CAL19840.1| penicillin-binding protein 7 precursor [Yersinia pestis CO92]
 gi|149291203|gb|EDM41278.1| penicillin-binding protein 7 precursor [Yersinia pestis CA88-4125]
 gi|162351646|gb|ABX85594.1| penicillin-binding protein 7 [Yersinia pestis Angola]
 gi|165913717|gb|EDR32336.1| penicillin-binding protein 7 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923844|gb|EDR40976.1| penicillin-binding protein 7 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991366|gb|EDR43667.1| penicillin-binding protein 7 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207071|gb|EDR51551.1| penicillin-binding protein 7 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962330|gb|EDR58351.1| penicillin-binding protein 7 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050309|gb|EDR61717.1| penicillin-binding protein 7 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056822|gb|EDR66585.1| penicillin-binding protein 7 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229679164|gb|EEO75267.1| Murein-DD-endopeptidase [Yersinia pestis Nepal516]
 gi|229689569|gb|EEO81630.1| Murein-DD-endopeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697484|gb|EEO87531.1| Murein-DD-endopeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704045|gb|EEO91058.1| Murein-DD-endopeptidase [Yersinia pestis Pestoides A]
 gi|262361233|gb|ACY57954.1| penicillin-binding protein 7 precursor [Yersinia pestis D106004]
 gi|262365230|gb|ACY61787.1| penicillin-binding protein 7 precursor [Yersinia pestis D182038]
 gi|270335708|gb|EFA46485.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis KIM D27]
 gi|294353653|gb|ADE63994.1| penicillin-binding protein 7 precursor [Yersinia pestis Z176003]
 gi|320015987|gb|ADV99558.1| Murein-DD-endopeptidase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 311

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 12/262 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A+A  S +    +           ++D  T  VI  N  D     AS+TKLMTA VV  
Sbjct: 24  LAIARGSAVEVKGTAPLELASGSAMVVDLQTNKVIYANNADKVVPIASITKLMTAMVVLD 83

Query: 68  FLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K  L   +++  + ++      S  +  S ++  + L L ++ S N  A ++A  
Sbjct: 84  A----KLPLDEILSVDIDQTKELKGVFSRVRVNSEISRKDMLLLTLMSSENRAAASLAHH 139

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YM 185
                  F++ MN  +K+LG+++TH++   G+    + +TARD+A L    K       +
Sbjct: 140 YPGGYNAFIKAMNAKAKSLGMNSTHYVEPTGL-SINNVSTARDLAKLLMATKQYPLIGQL 198

Query: 186 HYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLI 240
                K    +   Y     NTN  V          KTGFT  +G  +V   + G + + 
Sbjct: 199 STTTEKMATFREPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLVMRTVIGKRPVA 258

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L A  + T    +  L S 
Sbjct: 259 LVVLDAFGKYTHFADANRLRSW 280


>gi|212695505|ref|ZP_03303633.1| hypothetical protein ANHYDRO_00021 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677505|gb|EEB37112.1| hypothetical protein ANHYDRO_00021 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 408

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 139/362 (38%), Gaps = 30/362 (8%)

Query: 1   MRQ-------FLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAEN 45
           M++        L I+ +    N+F   SIA            +  Y + +  +G +  + 
Sbjct: 1   MKRKYKISALILAILFLFSPLNVFADESIAKEGDNVVGADKDVRAYLIGNQESGDIFYQK 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST---FKKGSTM 102
             D  +  AS++KLMT  +    +   K    T +  +K A +      +    K+G   
Sbjct: 61  NADKTYPIASMSKLMTFLLTREAIDSGKISYDTKVKGTKEAEDLTGPEYSSLGIKEGEEY 120

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG---VV 159
           T+   +  LIV S ND A  +A  +  +E  F + MN  ++ L L +  + NA G     
Sbjct: 121 TIKELITGLIVVSGNDCANLLASKISGSEDNFAKEMNKKAQELNLKSQKYYNASGVNTED 180

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMK 217
              + ++A+D+  L+  I   +P  + Y  + G++   K     +T    G   G DG+K
Sbjct: 181 DTQNSSSAKDLFELTRIILKKYPDILEYSNMDGIDDNKKDIHKKSTIPLKGDIKGVDGLK 240

Query: 218 TGFTCASGFNIVASA------IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           TG T  +G  ++ +        + D   I++++GA D  TR+     L+         +K
Sbjct: 241 TGTTEEAGSCLITTIDMGKFDPKNDYRAISIVMGAKDHPTRDAAMTDLIYYVSRYFNYKK 300

Query: 272 KINY-IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +     DF + N   E              I N +    +   K+      +K   L 
Sbjct: 301 LADKQTPSDFVKVNSVKEGYVELYPDQDVGFIIKNKSMPNVKTDIKKDIKAPIKKGEKLG 360

Query: 331 NK 332
             
Sbjct: 361 KV 362


>gi|303256971|ref|ZP_07342985.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderiales
           bacterium 1_1_47]
 gi|302860462|gb|EFL83539.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderiales
           bacterium 1_1_47]
          Length = 377

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 7/246 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S             D +T  V+ E   D P   AS+TKLMTA V+          L   
Sbjct: 126 SSDPLGLSSTAVLAYDMDTNQVLYEKNADQPLPIASITKLMTALVIVESG----VNLDDK 181

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            T+++       ++S  + G  ++   AL L ++ S N  A  +A +    + +F++ MN
Sbjct: 182 FTVTREDFVPSSAHSKLRMGMEISRRQALHLALMSSDNRAAHFLARTYPTGKAQFIKEMN 241

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +  LG+  + F ++ G+      +      +++   +    + +         I  ++
Sbjct: 242 IKAALLGMKDSVFYDSIGLNNDNRSSAVDLSYLITGASEYALIRELSTTPEASFRIGKRE 301

Query: 200 Y--PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                TN  +       +  KTG T A+G+ +V  A    +++  + L + ++  R   +
Sbjct: 302 VISSTTNRLIKDEDWDIELQKTGLTTAAGYCMVMQAHVDGKNVAFIFLDSPNKYARANDA 361

Query: 257 ASLLSM 262
             L S 
Sbjct: 362 EKLRSY 367


>gi|325846139|ref|ZP_08169233.1| serine-type D-Ala-D-Ala carboxypeptidase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481732|gb|EGC84767.1| serine-type D-Ala-D-Ala carboxypeptidase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 408

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 78/362 (21%), Positives = 139/362 (38%), Gaps = 30/362 (8%)

Query: 1   MRQ-------FLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAEN 45
           M++        L I+ +    N+F   SIA            +  Y + +  +G +  + 
Sbjct: 1   MKRKYKISALILAILFLFSPLNVFADDSIAKEGDNVVGADKDVRAYLIGNQESGDIFYQK 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST---FKKGSTM 102
             D  +  AS++KLMT  +    +   K    T +  +K A +      +    K+G   
Sbjct: 61  NADKTYPIASMSKLMTFLLTREAIDSGKISYDTKVKGTKEAEDLTGPEYSSLGIKEGEEY 120

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG---VV 159
           T+   +  LIV S ND A  +A  +  +E  F + MN  ++ L L +  + NA G     
Sbjct: 121 TIKELITGLIVVSGNDCANLLASKISGSEDNFAKEMNKKAQELNLKSQKYYNASGVNTED 180

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMK 217
              + ++A+D+  LS  I   +P  + Y  + G++   K     +T    G   G DG+K
Sbjct: 181 DTQNSSSAKDLFELSRIILKKYPDILEYSNMDGIDDNKKDIHKKSTIPLKGDIKGVDGLK 240

Query: 218 TGFTCASGFNIVASA------IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           TG T  +G  ++ +        + D   I++++GA D  TR+     L+         +K
Sbjct: 241 TGTTEEAGSCLITTIDMGKFDPKNDYRAISIVMGAKDHPTRDAAMTDLIYYVSRYFNYKK 300

Query: 272 KINY-IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +     DF + N   E              I N +    +   K+      +K   L 
Sbjct: 301 LADKQTPSDFVKVNSVKEGYVELYPDQDVGFIIKNKSMPNVKTDIKKDIKAPIKKGEKLG 360

Query: 331 NK 332
             
Sbjct: 361 KV 362


>gi|254733982|ref|ZP_05191696.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Western North America USA6153]
          Length = 407

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E+ N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEVKNVK 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TTFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|238788777|ref|ZP_04632568.1| D-alanyl-D-alanine endopeptidase [Yersinia frederiksenii ATCC
           33641]
 gi|238723082|gb|EEQ14731.1| D-alanyl-D-alanine endopeptidase [Yersinia frederiksenii ATCC
           33641]
          Length = 322

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 12/248 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T  VI  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 49  APLELASGSAMVIDLQTNKVIYSNNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 104

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F++ MN 
Sbjct: 105 VDIHQTKEMKGVYSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFIKAMNA 164

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YMHYFQIKGLEIKGKK 199
            +K+LG++ T ++   G+   G+ +TARD+  L    K       +     K    +   
Sbjct: 165 KAKSLGMTKTRYVEPTGL-SIGNVSTARDLTKLLVATKQYPLIGQLSTTTEKMATFRDPN 223

Query: 200 Y----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           Y     NTN  V          KTGFT  +G  +    + G + +  V+L A  + T   
Sbjct: 224 YTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGHRPVALVVLDAFGKYTHFA 283

Query: 255 VSASLLSM 262
            +  L S 
Sbjct: 284 DANRLRSW 291


>gi|326442983|ref|ZP_08217717.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 415

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 88/279 (31%), Gaps = 17/279 (6%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFL 69
           +S       + +      + + D  +G V+A + P     PAS  K++   T        
Sbjct: 69  VSLGTGAPVLPKDLTARSWVVADAESGEVLAAHNPHWRLAPASTLKMLFADTLLPKLPKA 128

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              K        +  N+S              + L   L+          AV +  +L  
Sbjct: 129 TTHKVSADELADVGLNSSVVGVEEDMTYSIHDLWLGVFLRSGND------AVHVLSALNG 182

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
              K VQ M   ++ L    T  ++  G    G  ++A D+ +++           +   
Sbjct: 183 GIDKTVQDMQAHAEELQALDTQVVSPDGYDAAGQVSSAYDLTLIARSGLQKKDFREYSAT 242

Query: 190 IKGLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           +        +   TN        +  + G  G+K G T  +G      A +G + L+  +
Sbjct: 243 MTADFPGKGQIVTTNRLLTGDFGLDPYKGLAGVKNGSTTHAGATFTGVAERGGRVLLVTV 302

Query: 244 LGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           +       N   K +  LL  GF        +  ++   
Sbjct: 303 MNPESEENNAVYKETERLLDWGFAAAGKVTPVGELVPPK 341


>gi|294814595|ref|ZP_06773238.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294327194|gb|EFG08837.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 434

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 88/279 (31%), Gaps = 17/279 (6%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFL 69
           +S       + +      + + D  +G V+A + P     PAS  K++   T        
Sbjct: 88  VSLGTGAPVLPKDLTARSWVVADAESGEVLAAHNPHWRLAPASTLKMLFADTLLPKLPKA 147

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              K        +  N+S              + L   L+          AV +  +L  
Sbjct: 148 TTHKVSADELADVGLNSSVVGVEEDMTYSIHDLWLGVFLRSGND------AVHVLSALNG 201

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
              K VQ M   ++ L    T  ++  G    G  ++A D+ +++           +   
Sbjct: 202 GIDKTVQDMQAHAEELQALDTQVVSPDGYDAAGQVSSAYDLTLIARSGLQKKDFREYSAT 261

Query: 190 IKGLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           +        +   TN        +  + G  G+K G T  +G      A +G + L+  +
Sbjct: 262 MTADFPGKGQIVTTNRLLTGDFGLDPYKGLAGVKNGSTTHAGATFTGVAERGGRVLLVTV 321

Query: 244 LGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           +       N   K +  LL  GF        +  ++   
Sbjct: 322 MNPESEENNAVYKETERLLDWGFAAAGKVTPVGELVPPK 360


>gi|163939181|ref|YP_001644065.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163861378|gb|ABY42437.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 428

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 80/354 (22%), Positives = 139/354 (39%), Gaps = 32/354 (9%)

Query: 4   FLVIIAMAMLS---------------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           F+++I +  L+                + P  +        + T +D  TG ++ +    
Sbjct: 10  FVMVICLFFLTPMTLYAETNIGVNPEQVAPPPAEGPNVFSQFATTIDAKTGDMLYDKNAH 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGSTMTLDN 106
           H   PAS+TK++TA ++    K          T S+ A +   SN    F  G T+  + 
Sbjct: 70  HRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFHPGETINRNT 124

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           AL +L+V SAND++ AIAE +  + + F   MN  +K LG   +HF+  +G+    HYTT
Sbjct: 125 ALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGAKDSHFVTPNGLHDPNHYTT 184

Query: 167 ARDMAILSW--RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
             DMA+++   +   +  Q M+  +                       + G KTGFT  +
Sbjct: 185 PYDMAMITRGVQKYPEILQAMNTKRTTVTTSTQTVSIFNKSTYFENPYSMGGKTGFTNEA 244

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDFY 281
              +V    +    +I V++ A  R    +    +    F   T +  ++      K  Y
Sbjct: 245 RNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMAEYSFGQFTKQTVLDKHSWHQKAKY 303

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK-DKESHFIDFEKITLLKNKIT 334
                +     S E+   + E  N  T  +    DKES    ++K       + 
Sbjct: 304 LNKDVDSELEKSAELMLKKDEGKNIKTAFRVNSVDKESL---YQKGIHRGEVVG 354


>gi|153948552|ref|YP_001401770.1| D-alanyl-D-alanine endopeptidase [Yersinia pseudotuberculosis IP
           31758]
 gi|152960047|gb|ABS47508.1| penicillin-binding protein 7 [Yersinia pseudotuberculosis IP 31758]
          Length = 311

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 12/262 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A+A  S +    +           ++D  T  VI  N  D     AS+TKLMTA VV  
Sbjct: 24  LAIARGSAVEVKGTAPLELASGSAMVVDLQTNKVIYANNADKVVPIASITKLMTAMVVLD 83

Query: 68  FLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K  L   +++  + ++      S  +  S ++  + L L ++ S N  A ++A  
Sbjct: 84  A----KLPLDEILSVDIDQTKELKGVFSRVRVNSEISRKDMLLLTLMSSENRAAASLAHH 139

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YM 185
                  F++ MN  +K+LG+S+TH++   G+    + +TARD+A L    K       +
Sbjct: 140 YPGGYNAFIKAMNAKAKSLGMSSTHYVEPTGL-SINNVSTARDLAKLLMATKQYPLIGQL 198

Query: 186 HYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLI 240
                K    +   Y     NTN  V          KTGFT  +G  +V   + G + + 
Sbjct: 199 STTTEKMATFREPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLVMRTVIGKRPVA 258

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L A  + T    +  L S 
Sbjct: 259 LVVLDAFGKYTHFADANRLRSW 280


>gi|308186137|ref|YP_003930268.1| penicillin-binding protein 7 [Pantoea vagans C9-1]
 gi|308056647|gb|ADO08819.1| penicillin-binding protein 7 [Pantoea vagans C9-1]
          Length = 315

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 106/279 (37%), Gaps = 20/279 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           +R  L+ +A+ +   I    + A                     ++D  T  V+  ++PD
Sbjct: 5   IRSTLLSLALLVSGQIVSLPAQATTSLSQLTPIAQPQIASGSAMIVDLTTNKVLFSSHPD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         M+   I+ +          S  K  S ++  N +
Sbjct: 65  RVRPIASITKLMTAMVVLDAHLPMNEMINVDISQTPE---MRGVFSRVKLNSQISRRNMM 121

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A +     + F+Q MN  +++LG+  T ++   G+      +   
Sbjct: 122 LLALMSSENRAAASLAHAYPGGYRAFIQAMNAKARSLGMKQTRYVEPTGLSTQNVSSAQD 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
            + +L    +      +   + +        Y     NTN  V          KTG+T  
Sbjct: 182 LVKLLKATREYPMLGALSTTKEETAVFAHPSYALPFRNTNHLVYKNDWHIQLTKTGYTDE 241

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V   +  ++ +  V+L A  + T    +  L S 
Sbjct: 242 AGHCLVMRTMINNRPVALVVLDAFGKYTHFADANRLRSW 280


>gi|82703413|ref|YP_412979.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Nitrosospira
           multiformis ATCC 25196]
 gi|82411478|gb|ABB75587.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Nitrosospira multiformis ATCC 25196]
          Length = 278

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 16/278 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+  ++++   +      F   A+ + +     ++D   G V+     D     AS+TKL
Sbjct: 1   MKNAILVVCATLAFMGGAFAKPADLSLRSNSALVVDPQRGQVLFHKNADSVMPIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           MTA VV          L   I I S +      + S  + G+  T    L+L ++ S N 
Sbjct: 61  MTAMVVLDAK----LPLNQEIVIDSADVDVIKYTRSRLRVGTKFTRGELLRLALMSSENR 116

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT------TARDMAI 172
            A A+  +       FV  MN  +  LG+ +T+F+++ G+      T        +    
Sbjct: 117 AAAALGRTYPGGLNAFVAAMNRKAFQLGMGSTYFVDSTGLNSGNVSTARDLAKMVKAAHG 176

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVAS 231
                            +  +  +   Y N+N  V +     G+ KTGF   +G  +V  
Sbjct: 177 YRLIRVFSTTAAHEVASMGKVRSRNLNYVNSNRLVRSSSWDIGISKTGFLSEAGRCLVMH 236

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSM---GFYN 266
           A    +  I V+L +  +N+R   +  +      GF  
Sbjct: 237 ANITGKPTIIVLLDSWGKNSRIGDANRIKKWLETGFTR 274


>gi|256397559|ref|YP_003119123.1| serine-type D-Ala-D-Ala carboxypeptidase [Catenulispora acidiphila
           DSM 44928]
 gi|256363785|gb|ACU77282.1| Serine-type D-Ala-D-Ala carboxypeptidase [Catenulispora acidiphila
           DSM 44928]
          Length = 410

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 6/256 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +     I    K   + + D  TG ++AE  P     PAS  K++TA  +   L    
Sbjct: 50  VAVPGTPPIPPDVKAGSFVIADEATGAILAERAPHDRLRPASTLKVLTALALMPRLDPAA 109

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L+ P  I+  A+  P +++   K       + L   +   + + A+A   ++      
Sbjct: 110 VHLSVPGDIASLATAEPGASAVGIKPGLSYRVSDLWNAVFLRSGNDAIATLAAMAGGAGP 169

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----PQYMHYFQ 189
            V  M  T++ L  + T  +NA G    G  ++A D+A+++     D        +   +
Sbjct: 170 TVDLMRQTAQRLHANDTVVVNADGYDADGQVSSAYDLALMARAGLQDPGFRAYCSLQKAK 229

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
              +     +  N N  +G + G  G+K G+T  +    V +A +  ++L+  +  A   
Sbjct: 230 FPSVNGTTFEIDNENRLLGKYPGMIGVKNGYTSLAHHTFVGAAERNGRTLVVSVFDAGTD 289

Query: 250 NTRNKVSASLLSMGFY 265
               + +A LL  GF 
Sbjct: 290 I--YQQTAKLLDWGFA 303


>gi|83745865|ref|ZP_00942922.1| D-alanyl-D-alanine-endopeptidase [Ralstonia solanacearum UW551]
 gi|207742996|ref|YP_002259388.1| d-alanyl-d-alanine-endopeptidase (penicillin-binding protein)
           [Ralstonia solanacearum IPO1609]
 gi|83727555|gb|EAP74676.1| D-alanyl-D-alanine-endopeptidase [Ralstonia solanacearum UW551]
 gi|206594393|emb|CAQ61320.1| d-alanyl-d-alanine-endopeptidase (penicillin-binding protein)
           [Ralstonia solanacearum IPO1609]
          Length = 392

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D  +G V+ +         AS+TKLMTA VV    +     +  
Sbjct: 112 ATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDAHQP----MDE 167

Query: 79  PITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + I+++  +Y  +  +  +  + +T ++ L L ++ S N  A A+  S       FV  
Sbjct: 168 LLEITEDDRDYERNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAA 227

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  LG++ TH+++++G+      +      I+    K    +         +   G
Sbjct: 228 MNRKAHELGMNDTHYVDSNGLSSSNVSSAMDLSKIVMAAYKVPLIRQFTTTAEHAVNANG 287

Query: 198 KKYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +     NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR  
Sbjct: 288 RTLHYVNTNRLVRGGEWEIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFA 347

Query: 255 VSASLLSM 262
            +  + + 
Sbjct: 348 DAVRVRNW 355


>gi|229010663|ref|ZP_04167863.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
 gi|228750628|gb|EEM00454.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
          Length = 407

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDMLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F  G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFHPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNERAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITRGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSTQTVSIFNKSTYFENPYSMGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 IYEDLKQMAEYSFGQFTKQTVLDKHSWHQKAKYLNKDVDSELEKSAELMLKKDEGKNIKT 309

Query: 309 QMKEAK-DKESHFIDFEKITLLKNKIT 334
             +    DKES    ++K       + 
Sbjct: 310 AFRVNSVDKESL---YQKGIHRGEVVG 333


>gi|111220633|ref|YP_711427.1| putative D-alanyl-D-alanine carboxypeptidase [Frankia alni ACN14a]
 gi|111148165|emb|CAJ59835.1| Putative D-alanyl-D-alanine carboxypeptidase (partial match)
           [Frankia alni ACN14a]
          Length = 541

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 12/258 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                + + D  +G V+A + P  P  PAS  K++TA  V              IT+ +N
Sbjct: 79  LTAQAWLVADAGSGAVLAASRPHAPDLPASTMKILTALTVLP-----GLPPDRVITVDEN 133

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           A     +      G   T+ +    +++ S ND  VA+ E+   T    +  MN  +++L
Sbjct: 134 APRVDGTKVGLVPGVGYTVRDLATAMMISSGNDATVALVEAAGGT-AAVLARMNALARSL 192

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G   T   +  G+   G  T+  D+A+L      D     +    +              
Sbjct: 193 GTRETVAGDPTGLDSPGQVTSVYDLAVLGRAALNDPSVRGYLTIPRASLAGRGDQRFEIQ 252

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           N N  + T+ GA G+K G+T A+G   V +A +G ++LI  +L A         + +LL 
Sbjct: 253 NHNALLRTYDGAVGVKNGYTVAAGATFVGAATRGGRTLIVALLRA--APAYGTDARALLD 310

Query: 262 MGFYNKTDRKKINYIIKD 279
            GF +      + Y+   
Sbjct: 311 WGFAHADQVTPVGYLPNP 328


>gi|291545877|emb|CBL18985.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. SR1/5]
          Length = 277

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 17/260 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M   +++ A+ ++  IFP  +   E        L+D   G V+           AS TK+
Sbjct: 1   MAAVVLVTAVLIICQIFPVKAADDENLYALSAVLMDGENGRVLYGKEAYKGRPNASTTKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT  +     K         + +S NA+  P +    ++G    L++ L  L++KS ND 
Sbjct: 61  MTCILALELAKG-----DDYVQVSGNAASQPQTRLGMREGQQFYLEDLLYSLMLKSHNDS 115

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSW 175
           AVAIAE +  + + F + MN  +K LG   THF+  +G+        H+TTARD+A++  
Sbjct: 116 AVAIAEHIGGSVEGFAEKMNEKAKELGCKDTHFVTPNGLDGEDEGGIHHTTARDLALIMA 175

Query: 176 RIKTDFPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
               +   ++H  Q +          K     NTN  +    G    KTGFT  +G+  V
Sbjct: 176 YAIKN-ATFVHITQTRDYTFTDISGKKHYSVHNTNAFLDMETGVISGKTGFTGNAGYCYV 234

Query: 230 ASAIQGDQSLIAVILGALDR 249
            +  Q ++  I  +LG    
Sbjct: 235 CAVRQDERLFIVALLGCGWP 254


>gi|222152531|ref|YP_002561706.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus uberis 0140J]
 gi|222113342|emb|CAR40942.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus uberis
           0140J]
          Length = 416

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 136/337 (40%), Gaps = 28/337 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           ++ +    +     K       D +TG V+ +         ASL+K++T Y+V+  +K  
Sbjct: 18  INFVNADSTEDFHVKAKSAIAFDVSTGKVLYQKNEKEVLPVASLSKVLTTYLVYKEVKSG 77

Query: 73  KAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K    TP+TIS            ++        T+   L  ++V +AN  A+A+AE +  
Sbjct: 78  KLSWDTPVTISNYPYELTTNYSISNVPLDARQYTVKELLNAVLVTNANSAAIALAEKISG 137

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSW 175
           TE +FV  M    K  G+     +NA G+                  +  +A D+AI+S 
Sbjct: 138 TEPRFVDLMTKQLKEWGIKDAKLVNATGLSNAILGDHIYPYSTSDDENQMSALDLAIVSN 197

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVAS 231
            + ++FP+ + + Q        +K  + N+ +        G +G+   ++  SG + +AS
Sbjct: 198 HLLSEFPEVLKHTQKASATFSNQKIFSYNYMLKGMPNYRDGVNGLFVAYSEKSGASFLAS 257

Query: 232 AIQGDQSLIAVILGALDRNT----RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           + + + S++ V+L A   N       + + +LL+    +      +    K         
Sbjct: 258 STENNMSVVTVVLNAEQSNEEELGHFRETNTLLNYISNHFEPVILLEKGKKVP---KTKL 314

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
            + +  ++      +      +   ++D +S  ID++
Sbjct: 315 NLLDGKQKSVNLIAKKNLIGIRKIGSQDGDSVTIDYK 351


>gi|29839835|ref|NP_828941.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila caviae GPIC]
 gi|29834182|gb|AAP04819.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila caviae GPIC]
          Length = 433

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 124/363 (34%), Gaps = 40/363 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R  L+     + +      S     +     ++ + TG V+     D    PAS+TK+ T
Sbjct: 7   RSGLIGFFAGIFTIPSYANSPFPETRGNAVAVIQSETGKVLYAKDIDKRIYPASMTKIAT 66

Query: 62  AYVVFSFL-----KEKKAMLTTPITISKNASEYPPSNSTFKK------------GSTMTL 104
           A  +         +          +I+  A +     S                   ++ 
Sbjct: 67  ALFILRKHPDLLNRFITVKQDAIASITPQAKKQSGYRSPPHWLETDGVTIQLQNKEEVSG 126

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
            +    L++ SAND A  +A +   +  +F++ +N+  K +G + THF N HG+    HY
Sbjct: 127 WDLFHALLICSANDAANTLAMACSGSVSEFMKQLNSFLKEIGCADTHFNNPHGLHHPNHY 186

Query: 165 TTARDMAILSWRIKTDF-------PQYMHYFQIKGLEIKGKKYPNT---NWAVGTFLGAD 214
           TTARD+  +      +                    + +     N      +   +  A 
Sbjct: 187 TTARDLTSIMREGLKEPLFRQVIRTTNYKMAATNLSQERVLNLTNKLILPGSTYYYPPAL 246

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G KTG T  +G N+V +A +  +S+I +  G        +   +L    F     R+ + 
Sbjct: 247 GGKTGTTKDAGKNLVFAAKKHGRSIITIAAGYPTMGELYEDVIALCEGVFNEPVLRRYLI 306

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH-------FIDFEKIT 327
              + +  +        +  +V       + Y+    E ++  +            +K  
Sbjct: 307 PPTEKYTLR------LGLLGKVSIPLPNGVYYDFYASEGEELRTICFVPHATKFPIQKGD 360

Query: 328 LLK 330
           LL 
Sbjct: 361 LLG 363


>gi|17546328|ref|NP_519730.1| D-alanyl-D-alanine-endopeptidase (penicillin-binding protein)
           [Ralstonia solanacearum GMI1000]
 gi|17428625|emb|CAD15311.1| putative d-alanyl-d-alanine-endopeptidase (penicillin-binding
           protein) [Ralstonia solanacearum GMI1000]
          Length = 375

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 6/247 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D  +G V+ +         AS+TKLMTA VV    +    +L  
Sbjct: 93  ATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDAHQPMDELLEI 152

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +      + S  + G+ +T ++ L L ++ S N  A A+  S       FV  M
Sbjct: 153 TE---DDRDFERNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAAM 209

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +  LG++ TH+++++G+      +      I+    K    +         +   G+
Sbjct: 210 NRKAHELGMTDTHYVDSNGLSSSNVSSAMDLAKIVMAAYKVPLIRQFTTTAEHTVNANGR 269

Query: 199 KYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR   
Sbjct: 270 TLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFAD 329

Query: 256 SASLLSM 262
           +  + + 
Sbjct: 330 AVRVRNW 336


>gi|171466626|gb|ACB46501.1| D-ala, D-ala carboxypeptidase [Actinomadura kijaniata]
          Length = 309

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 11/260 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK-EKKA 74
                +           LLD     V     P       S+TK+MTAYVV      ++K 
Sbjct: 30  AVSAKAGPSGVYAKSALLLDVGAKKVRWSRSPHTKRRIGSITKVMTAYVVIKSGNLDRKI 89

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            +          +    S++    G  +T+   L+ L++ S  D A  +A++     K F
Sbjct: 90  TVQRKHVDYLRGNGAGGSSAGLVVGDRLTVRQLLRALMLPSGCDAAYVLADAYGPGWKGF 149

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH-------Y 187
           V  MN T++ L ++ T + N  G+   G    +               +          Y
Sbjct: 150 VAKMNKTARGLKMTNTKYANFDGIDWKGATMYSTAYDQTRLAAAAMKLKEFRSVVGTRSY 209

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                       + NTN  +G + G  G+KTGFT  +G + +  A +G + L+ ++L + 
Sbjct: 210 RVPPTSTTHIYNWTNTNALLGKYKGMTGVKTGFTNMAGASFMFGAKRGGRELVGIVLNSG 269

Query: 248 D---RNTRNKVSASLLSMGF 264
               ++ R   ++ +L+ GF
Sbjct: 270 SGSYKSRRFTDASKILNWGF 289


>gi|262201714|ref|YP_003272922.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Gordonia
           bronchialis DSM 43247]
 gi|262085061|gb|ACY21029.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Gordonia
           bronchialis DSM 43247]
          Length = 411

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 95/281 (33%), Gaps = 25/281 (8%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
               I +      + + D ++GHVIA   P   + PAS  K++ A V           L 
Sbjct: 81  SAGPIPQRLTSAAWLIADVDSGHVIAAKDPHGRYRPASTIKVLLALVALR-----DLHLD 135

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +  +         +     G   T  + L  L++ S ND A A++       +  +  
Sbjct: 136 DVVEPTVEDWSTEGDSCGMGPGGHYTTRDLLTGLLMVSGNDCANALSR-SLGGTEATLAK 194

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  + +LG   T   +  G+   G  T+  DMA+       D   +     ++      
Sbjct: 195 MNELAASLGAHDTRAASPSGLDAAGMSTSPYDMALFFRAALRD-NTFRELIGLRTFRFPD 253

Query: 198 K----------------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                             Y + +  +  + G  G KTG+T  +    V +  +  ++++ 
Sbjct: 254 YPPRADVPGDKPHPAYDMYTSNHLLLEDYPGMIGGKTGYTDDALKTFVGAVHRDGRTIMV 313

Query: 242 VILGALD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           V +  L    +     + S+   GF +       + +    
Sbjct: 314 VQMYGLSVAGDMYWDQAKSMFDYGFRSARTVSVGSLVDPTP 354


>gi|229090329|ref|ZP_04221573.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|228693023|gb|EEL46740.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
          Length = 406

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 15/299 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                       + T +D  TG ++ +    H   PAS+TK++TA ++    K       
Sbjct: 17  APPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK-----PE 71

Query: 78  TPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + F 
Sbjct: 72  DQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVENFA 131

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K   +
Sbjct: 132 NMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRTTV 190

Query: 196 KGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
              +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R   
Sbjct: 191 TTSRQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEI 249

Query: 253 NKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            +    +    F     +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 YEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEGKNVKT 308


>gi|73663386|ref|YP_302167.1| penicillin binding protein 4 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495901|dbj|BAE19222.1| penicillin binding protein 4 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 431

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 145/365 (39%), Gaps = 50/365 (13%)

Query: 1   MRQFLV-IIAMAMLSNIFPFLSIAETNKLPYYT------LLDT----------NTGHVIA 43
           MR+F++ II +  +  I    + AE+             + D+           TG ++ 
Sbjct: 1   MRKFILTIITVLFVGTIITPFAQAESITPTQAANQYGYNVTDSYQPEGAINVSQTGQLLY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
           +   +  W PAS+TKLMT Y+    + +    L   + I+            SN+    G
Sbjct: 61  QYNINKTWYPASMTKLMTMYLTLEAVNKGDLSLNDKVKITDEHYRMSTLPELSNTKLYPG 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T T+   L++ +  S+N  A+ +A+ +      F   MN+ +K+LG+  THF+N  G  
Sbjct: 121 ETYTIKELLQITVSNSSNAAALILAKEVSGNLSDFTDKMNSKAKSLGMKDTHFVNPTGAE 180

Query: 160 Q--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
                            + +TA+D  ILS     D P+ + + +       G  Y   N 
Sbjct: 181 NKQLKDFAPKKYKNEDNNTSTAKDFGILSQHAVQDTPKILDFTKQLAPTQHGVTYYTFNH 240

Query: 206 A----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKV 255
           +      +  G DG+KTG +  + +N   +  +    +  VI+GA D         RN +
Sbjct: 241 SLEGADMSLEGTDGLKTGSSDIADYNHTITTKRDGFRINQVIMGAGDYKNLGGEKQRNMI 300

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
              L++M F      K ++        Q ++ +   + +++     +  + N      +D
Sbjct: 301 GNGLMNMSFDQYKYTKILSKGE-----QKINGKTYFVEKDLYDVLPKDFDKNDYKVVIED 355

Query: 316 KESHF 320
            ++H 
Sbjct: 356 DKAHI 360


>gi|262370174|ref|ZP_06063501.1| D-alanyl-D-alanine endopeptidase [Acinetobacter johnsonii SH046]
 gi|262315213|gb|EEY96253.1| D-alanyl-D-alanine endopeptidase [Acinetobacter johnsonii SH046]
          Length = 351

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 8/252 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               S   +       ++D NTG V+     +     AS+TKLMTA V+          +
Sbjct: 96  TSKYSNQPSVNARAALVMDGNTGEVLYSKNSNTALPIASITKLMTAVVISDARLNMSENI 155

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T      + S    S+S+ + G +M    AL   ++KS N  A A+A +       FV 
Sbjct: 156 -TLQQADFSCSGCKSSSSSLRAGDSMNRAEALLFALMKSENPAASALARTYPGGRSAFVS 214

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  +K+LG+++TH+M + G+   G+  +ARD+ IL     + +     +      +  
Sbjct: 215 AMNAKAKSLGMNSTHYMESTGL-HPGNIASARDLGIL-VNAASQYGLIRQFSTTASYDFN 272

Query: 197 GK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 K  NTN  V       +  KTGF   +G  +V      ++  + V+LGA     
Sbjct: 273 LGYRVLKSNNTNALVRNGGWNINISKTGFINEAGRCVVMHTTLNNRPAVVVLLGADSSAA 332

Query: 252 RNKVSASLLSMG 263
           R   +  L++  
Sbjct: 333 RTNDATRLMNWA 344


>gi|271500976|ref|YP_003334001.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Dickeya
           dadantii Ech586]
 gi|270344531|gb|ACZ77296.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Dickeya
           dadantii Ech586]
          Length = 319

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 97/265 (36%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAE---TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +   A      P    A            ++D     V+  + PD     AS+TKLMTA 
Sbjct: 19  VCFAAQAVAKTPVTQHAPSRQEIASGSAMVVDMRNNEVLYSSNPDVVVPIASVTKLMTAM 78

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV    +     L   I++   +  E     S  + GS ++  + L L ++ S N  A +
Sbjct: 79  VVLDANQP----LDELISVDISHTKEMQGVYSRVRLGSEISRHDMLLLALMSSENRAAAS 134

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A       + F+  MN  +++LG+  T+++   G+      T      +L    +    
Sbjct: 135 LAHHYRGGYQAFITAMNAKARSLGMMHTYYVEPTGLSTSNVSTARDLTKLLIASKQYPLL 194

Query: 183 QYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
             +     K        Y     NTN  +          KTGFT  +G  +V   + G +
Sbjct: 195 SQLSTTHEKTAVFTHPSYTLPFRNTNHLIYRPDWNIQLTKTGFTNQAGHCLVMRTVIGGR 254

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  V+L A  + T    +  L + 
Sbjct: 255 PVSLVVLDAFGKFTHFADANRLRNW 279


>gi|228984448|ref|ZP_04144626.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229154942|ref|ZP_04283056.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228628500|gb|EEK85213.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228775314|gb|EEM23702.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 407

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 75/327 (22%), Positives = 133/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG V+ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDVLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPFDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKATYLNKDIDSELEKSAELMLKKDEGKNVR 308

Query: 308 TQMKEAKDKESHFIDFEKITLLKNKIT 334
           T  + A   +     + K       + 
Sbjct: 309 TTFRAASLDKDSL--YHKGIHRGEVVG 333


>gi|169343528|ref|ZP_02864527.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|169298088|gb|EDS80178.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           perfringens C str. JGS1495]
          Length = 423

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/349 (19%), Positives = 127/349 (36%), Gaps = 34/349 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++ L  I +A+  ++F  +                 Y   LD  TG +I     D    P
Sbjct: 6   KKLLSSILIALSVSLFTPIKATVQAAEISQPNIVGKYAVTLDYETGEIIYAKGIDEKAYP 65

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TK+MT+ +      +  +   T    ++       S      G  M  ++ +K L++
Sbjct: 66  ASTTKVMTSLLFAEHASKNDSFPYTADAKAQQPYTLNNSFGPIPVGEGMNANDLMKALLM 125

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            SAND A  IA+ +  + +KF   MNN  K LGL  THF+  +G+    HY+TA D+A++
Sbjct: 126 FSANDAAAVIADGVAGSAEKFSVMMNNEVKKLGLKNTHFVTPNGLHNDDHYSTAYDLAVI 185

Query: 174 SWRIKTDFPQYMHY---FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 +               +  K     N N  +G   G  G KTGFT  +G  +V+
Sbjct: 186 LQNAYKNPWVSETMALKDSDITVNGKKVLLENRNKELGIN-GNIGGKTGFTTPAGRCLVS 244

Query: 231 SAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              +  + +I  +L +               ++   +         +     + +   + 
Sbjct: 245 VYERNGRKIIGAVLNSQYDAKDEIVFNDMNKIIDYSY---------SVDKVPYIKAGTTI 295

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +   +  ++          +      ++          I   KN + +K
Sbjct: 296 DTIPVEYKLFRWFGPTKKIDVPFVATEN----------IDYYKNYVNEK 334


>gi|145599789|ref|YP_001163865.1| D-alanyl-D-alanine endopeptidase [Yersinia pestis Pestoides F]
 gi|186894625|ref|YP_001871737.1| D-alanyl-D-alanine endopeptidase [Yersinia pseudotuberculosis
           PB1/+]
 gi|108776609|gb|ABG19128.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Yersinia pestis Nepal516]
 gi|108778797|gb|ABG12855.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Yersinia pestis Antiqua]
 gi|145211485|gb|ABP40892.1| penicillin-binding protein 7 precursor [Yersinia pestis Pestoides
           F]
 gi|186697651|gb|ACC88280.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Yersinia
           pseudotuberculosis PB1/+]
          Length = 323

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 12/262 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A+A  S +    +           ++D  T  VI  N  D     AS+TKLMTA VV  
Sbjct: 36  LAIARGSAVEVKGTAPLELASGSAMVVDLQTNKVIYANNADKVVPIASITKLMTAMVVLD 95

Query: 68  FLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K  L   +++  + ++      S  +  S ++  + L L ++ S N  A ++A  
Sbjct: 96  A----KLPLDEILSVDIDQTKELKGVFSRVRVNSEISRKDMLLLTLMSSENRAAASLAHH 151

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YM 185
                  F++ MN  +K+LG+++TH++   G+    + +TARD+A L    K       +
Sbjct: 152 YPGGYNAFIKAMNAKAKSLGMNSTHYVEPTGL-SINNVSTARDLAKLLMATKQYPLIGQL 210

Query: 186 HYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLI 240
                K    +   Y     NTN  V          KTGFT  +G  +V   + G + + 
Sbjct: 211 STTTEKMATFREPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLVMRTVIGKRPVA 270

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L A  + T    +  L S 
Sbjct: 271 LVVLDAFGKYTHFADANRLRSW 292


>gi|309807067|ref|ZP_07701047.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 03V1-b]
 gi|312870869|ref|ZP_07730974.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           3008A-a]
 gi|308166563|gb|EFO68762.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 03V1-b]
 gi|311093559|gb|EFQ51898.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           3008A-a]
          Length = 385

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 117/344 (34%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 19  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 78

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 79  EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 138

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 139 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDMGILIKHLLLEFPQVLE 198

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L+     K  K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 199 TTRIAKLDFLDGRKTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 257

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + +I VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 258 GRRIITVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 317

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 318 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 361


>gi|229132169|ref|ZP_04261027.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228651316|gb|EEL07293.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
          Length = 407

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 17/327 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P  +        + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPAEGPNVFSQFATTIDAKTGDMLYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F  G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTFSQLALDQEKSNYQIEFHPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIK 191
           F   MN  +K LG   +HF+  +G+    HYTT  DMA+++   +   +  Q M+  +  
Sbjct: 131 FANMMNERAKQLGAKDSHFVTPNGLHDPNHYTTPYDMAMITRGVQKYPEILQAMNTKRTT 190

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                                + G KTGFT  +   +V    +    +I V++ A  R  
Sbjct: 191 VTTSTQTVSIFNKSTYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPE 249

Query: 252 RNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
             +    +    F   T +  ++      K  Y     +     S E+   + E  N  T
Sbjct: 250 IYEDLKQMAEYSFGQFTKQTVLDKHSWHQKAKYLNKDVDSELEKSAELMLKKDEGKNIKT 309

Query: 309 QMKEAK-DKESHFIDFEKITLLKNKIT 334
             +    DKES    ++K       + 
Sbjct: 310 AFRVNSVDKESL---YQKGIHRGEVVG 333


>gi|254522509|ref|ZP_05134564.1| beta-lactamase [Stenotrophomonas sp. SKA14]
 gi|219720100|gb|EED38625.1| beta-lactamase [Stenotrophomonas sp. SKA14]
          Length = 260

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 10/251 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                     LD  T  VI ++  +    PASLTKLMTAY  ++ ++E+       +TI+
Sbjct: 6   PERAPLSSITLDAATFAVIHQHNAETARQPASLTKLMTAYAAYACVEERGRAWDEAVTIA 65

Query: 84  KNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            N                G T+TL   L+ L++ S ND A+AIA  L  ++  F+  MN 
Sbjct: 66  SNDVHAVADDETRMGLVPGETVTLARLLEGLMIVSGNDAALAIARHLDGSQTAFLDRMNR 125

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ LGL +T F +  G+    H ++ARDMA+L+  +  D PQ +     +         
Sbjct: 126 HARQLGLRSTWFASVSGITTPHHASSARDMAVLAACLLNDHPQILAITAQRAFVHGRFSR 185

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ--GDQ----SLIAVILGALDRNTRNK 254
            N N  +G   G DG+KTG+T A+GF + A+A +    +     LI V+LG+  R+ R+ 
Sbjct: 186 NNQNALLGEH-GVDGLKTGYTRAAGFCLAATACRTVPGRAQPVRLITVVLGSESRDARDA 244

Query: 255 VSASLLSMGFY 265
           +    LS GF 
Sbjct: 245 LVRDQLSAGFA 255


>gi|153954083|ref|YP_001394848.1| DacA3 [Clostridium kluyveri DSM 555]
 gi|219854696|ref|YP_002471818.1| hypothetical protein CKR_1353 [Clostridium kluyveri NBRC 12016]
 gi|146346964|gb|EDK33500.1| DacA3 [Clostridium kluyveri DSM 555]
 gi|219568420|dbj|BAH06404.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 420

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 73/354 (20%), Positives = 147/354 (41%), Gaps = 23/354 (6%)

Query: 1   MRQ------FLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++      F++I  + +  N+       +            +D  T  +I E  PD   
Sbjct: 1   MKRKNNIILFVLIFTLCLNLNVSAADESSNTLPEIYGTSAITVDMQTNEIIYEKNPDTKI 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS TKL+TA ++    KE   +  T    ++  S    +    + G T++  N +  L
Sbjct: 61  YPASTTKLLTAILLEKNKKETDMLTYTAEAKAQPQSSLNSAARPIEVGDTISAKNVMDAL 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SAND+A  IAE++ K+  +F   MN   ++L L  THF+  +G+    HY+T+ DM+
Sbjct: 121 LMFSANDMACVIAENISKSIPEFADKMNEEVQSLNLKNTHFITPNGLHNPDHYSTSYDMS 180

Query: 172 ILSWRIKTDFPQYMHYFQ----IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           I++     +       ++    +   +       NTN  +G   G  G KTG+T  +G  
Sbjct: 181 IIAREAFKNSWIRDTIYKSTSTVTTSKGASFAIINTNKLLGK-DGCIGGKTGYTDPAGRC 239

Query: 228 IVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDR-----KKINYIIKD 279
           +VA   + ++ ++ +++ +    +          +++  +             I+     
Sbjct: 240 LVAIYERDNRKILGIVMNSIYDTNDTYVFNDMEKIINWSYSKTPYILHAKDSIIDKKDVK 299

Query: 280 FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           F     +N    +   +  T+  +  Y+  + + + ++   I    I  LK +I
Sbjct: 300 FKFLPFTNFEKTVRVPI-KTEDNVSYYDNDINKKELQQKITITTVNIKSLKGEI 352


>gi|331673660|ref|ZP_08374423.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA280]
 gi|331068933|gb|EGI40325.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA280]
          Length = 324

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|110806113|ref|YP_689633.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri 5 str. 8401]
 gi|110615661|gb|ABF04328.1| penicillin-binding protein 7 [Shigella flexneri 5 str. 8401]
          Length = 310

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVALFSLALMLAVPFAPDAVAKTAAVNTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|30261380|ref|NP_843757.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Ames]
 gi|47526551|ref|YP_017900.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|65318644|ref|ZP_00391603.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
 gi|165870392|ref|ZP_02215047.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|170706252|ref|ZP_02896713.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|227815884|ref|YP_002815893.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CDC 684]
 gi|229603883|ref|YP_002865796.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
 gi|254726225|ref|ZP_05188007.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A1055]
 gi|254753718|ref|ZP_05205753.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Vollum]
 gi|254758814|ref|ZP_05210841.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Australia 94]
 gi|30255234|gb|AAP25243.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           Ames]
 gi|47501699|gb|AAT30375.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|164713887|gb|EDR19409.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|170128786|gb|EDS97652.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|227004270|gb|ACP14013.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           CDC 684]
 gi|229268291|gb|ACQ49928.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
          Length = 428

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 15/301 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 37  VAPPPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 91

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 92  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 152 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 210

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 211 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 269

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E+ N  
Sbjct: 270 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEVKNVK 329

Query: 308 T 308
           T
Sbjct: 330 T 330


>gi|170025107|ref|YP_001721612.1| D-alanyl-D-alanine endopeptidase [Yersinia pseudotuberculosis
           YPIII]
 gi|169751641|gb|ACA69159.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Yersinia
           pseudotuberculosis YPIII]
          Length = 323

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 12/262 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A+A  S +    +           ++D  T  VI  N  D     AS+TKLMTA VV  
Sbjct: 36  LAIARGSAVEVKGTAPLELASGSAMVVDLQTNKVIYANNADKVVPIASITKLMTAMVVLD 95

Query: 68  FLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K  L   +++  + ++      S  +  S ++  + L L ++ S N  A ++A  
Sbjct: 96  A----KLPLDEILSVDIDQTKELKGVFSRVRVNSEISRKDMLLLTLMSSENRAAASLAHH 151

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YM 185
                  F++ MN  +K+LG+S+TH++   G+    + +TARD+A L    K       +
Sbjct: 152 YPGGYNAFIKAMNAKAKSLGMSSTHYVEPTGL-SINNVSTARDLAKLLMATKQYPLIGQL 210

Query: 186 HYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLI 240
                K    +   Y     NTN  V          KTGFT  +G  +V   + G + + 
Sbjct: 211 STTTEKMATFREPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLVMRTVIGKRPVA 270

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L A  + T    +  L S 
Sbjct: 271 LVVLDAFGKYTHFADANRLRSW 292


>gi|297158599|gb|ADI08311.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces bingchenggensis
           BCW-1]
          Length = 297

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 22/278 (7%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++   L+ +        T       +++  TG  +     D   +  S TK+MTA VV +
Sbjct: 23  LSAGALAPVQAATVATPTITAKGGFVMNNGTGKALYTKAADTRLSTGSTTKIMTARVVLA 82

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFK-----KGSTMTLDNALKLLIVKSANDIAVA 122
                   L   +T+ K  S+Y   N+         G  +T+   L  L++ S  D A A
Sbjct: 83  QP---NLNLDAKVTVQKAYSDYIVDNNWASSAKLIVGDKVTVRQLLYGLMLPSGCDAAYA 139

Query: 123 IAESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD------- 169
           +A+       +  +       MN+T+K+LGL+ THF +  G+    +Y+T RD       
Sbjct: 140 LADKFGTGSTRAARVKSFIGKMNSTAKSLGLTNTHFDSFDGIGHGANYSTPRDLTKLASS 199

Query: 170 -MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            M   ++R              K    +   + NTN  +GT+ GA G+KTG    + + +
Sbjct: 200 AMKYSTFRTVVKTKSTKQKVTTKSGGYRYMDWTNTNPLLGTYSGAIGVKTGSGPEAKYCL 259

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           V +A +  +++I  +L +   + R   +  LL+ GF  
Sbjct: 260 VFAATRNSKTVIGTVLASSSVDNRTADAKKLLNYGFAK 297


>gi|42526491|ref|NP_971589.1| penicillin binding protein [Treponema denticola ATCC 35405]
 gi|41816684|gb|AAS11470.1| penicillin binding protein [Treponema denticola ATCC 35405]
          Length = 478

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 84/357 (23%), Positives = 140/357 (39%), Gaps = 33/357 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL + + +                   Y L+  NTG ++AE+  D    PASLTKL+T Y
Sbjct: 76  FLPVKSSSSNIAPSAKKIELPKIDAESYILIHANTGTILAESNADKIIPPASLTKLVTIY 135

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDI 119
            +    + K   L   +   + A         +     +  +++++  ++ + V S ND 
Sbjct: 136 TMLQKPQFK--DLEKVVFPPEEAWAIFLPKGAAWMGLGENQSLSIEELIRGMAVCSGNDA 193

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+A A     + +KF   MN   K +GL +T F ++ G+    + TTARD A+ S     
Sbjct: 194 ALAAALLTEGSIEKFTLKMNEAVKTMGLKSTRFEDSSGL-SEKNQTTARDFALFSLHYLK 252

Query: 180 DFPQYMHYFQ-----IKGLEIKGKKYPN------------TNWAVGTFLGADGMKTGFTC 222
            +P+ +  F          +       N            TN  +    G DG+KTGF  
Sbjct: 253 QYPENLKKFHSVNEISYPQKHNILIKKNSDGLKDFQIKPATNTLLKKIEGCDGLKTGFIY 312

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRN------TRNKVSASLLSMGFYNKTDRKKINYI 276
            SGFNI  +A +  +  IAVILG   +N       R + S  L++  F N        + 
Sbjct: 313 ESGFNISLTAQKNGERFIAVILGGHGKNFTEGIFKREQNSIKLMNFAFDNFKSFDIREHN 372

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                   LS+ +   +        +       +   K+ E H    E++ +L + I
Sbjct: 373 KIKRSVSVLSSNLNVKTSAFMPLLADEDFSQDYLTVFKNDERH---IEQVIILPDVI 426


>gi|47566159|ref|ZP_00237187.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
 gi|47556712|gb|EAL15043.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
          Length = 428

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 78/354 (22%), Positives = 140/354 (39%), Gaps = 32/354 (9%)

Query: 4   FLVIIAMAMLS---------------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           F  +I + +L+                + P           + T +D  TG V+ +    
Sbjct: 10  FTTVICLFLLTPMTLRAETNIGVNPEQVAPPPKEGPNVFSQFATTIDAKTGDVLYDKNAH 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--FKKGSTMTLDN 106
           H   PAS+TK++TA ++    K          T S+ A +   SN    F+ G T+  + 
Sbjct: 70  HRAFPASMTKVLTAILLMEHTK-----PEDQFTFSQLALDQEKSNYQIEFQPGETINRNT 124

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           AL +L+V SAND++ AIAE +  + + F   MN  +K LG + +HF+  +G+    HYTT
Sbjct: 125 ALMILMVLSANDVSYAIAERIGGSVENFANMMNERAKQLGATDSHFVTPNGLHDPNHYTT 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---LGADGMKTGFTCA 223
             DMA+++      +P+ +     K   +   +   + +   T+     + G KTGFT  
Sbjct: 185 PFDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNE 243

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY---IIKDF 280
           +   +V    +    +I V++ A  R    +    +    F     +  ++      K  
Sbjct: 244 ARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDLKQMADYSFGQFVKQTVLDKHSWHQKAT 302

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           Y     +     S E+   + E  N  T  + A   +     + K       + 
Sbjct: 303 YLNKDIDSELEKSAELMLKKDEGKNVRTTFRAASLDKDSL--YHKGIHRGEVVG 354


>gi|183981810|ref|YP_001850101.1| D-alanyl-D-alanine carboxypeptidase DacB [Mycobacterium marinum M]
 gi|183175136|gb|ACC40246.1| D-alanyl-D-alanine carboxypeptidase DacB [Mycobacterium marinum M]
          Length = 290

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D +TG V+A    +    PAS  K++ A V           L + +   
Sbjct: 37  PDGPAQTWIVADLDTGQVLAGRDQNVTHPPASTIKVLLALVALDE-----LDLNSTVVAD 91

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +  +    +    K G T T    L  L++ S ND A  +A+ +   +   V  MN  + 
Sbjct: 92  EADTHVECNCVGVKAGHTYTARQLLDGLLLVSGNDAANTLAQ-MLGGQDAAVAKMNAKAA 150

Query: 144 NLGLSATHFMNAHGVVQHG--HYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            LG   TH     G+   G   ++TA D+A++      +            +   E    
Sbjct: 151 ALGAMNTHAATPSGLDGPGGSGWSTAHDLAVIFRTAMANPVFAHITAEPSAMFPGEDGEH 210

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTG+T A+    V +A +  + L+  ++         T    
Sbjct: 211 PIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARNGRRLVIAMMYGLVKEGGPTYWDQ 270

Query: 256 SASLLSMGFY 265
           + SL   GF 
Sbjct: 271 AGSLFDWGFA 280


>gi|123443099|ref|YP_001007073.1| D-alanyl-D-alanine endopeptidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090060|emb|CAL12923.1| penicillin-binding protein 7 precursor [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 311

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 93/247 (37%), Gaps = 10/247 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T  VI  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 38  APLELASGSAMVVDLQTNKVIYANNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 93

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F++ MN 
Sbjct: 94  VDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFIKAMNA 153

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K+LG++ T ++   G+  +   T      +L    +      +     K    +   Y
Sbjct: 154 KAKSLGMTKTRYVEPTGLSINNVSTARDLTKLLIATKQYPLIGQLSTTTEKMATFREPNY 213

Query: 201 ----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V          KTGFT  +G  +    + G++ +  V+L A  + T    
Sbjct: 214 TLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVALVVLDAFGKYTHFAD 273

Query: 256 SASLLSM 262
           +  L S 
Sbjct: 274 ANRLRSW 280


>gi|203284509|ref|YP_002222249.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia duttonii Ly]
 gi|203288043|ref|YP_002223058.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia recurrentis A1]
 gi|201083952|gb|ACH93543.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia duttonii Ly]
 gi|201085263|gb|ACH94837.1| serine-type D-Ala-D-Ala carboxypeptidase [Borrelia recurrentis A1]
          Length = 333

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 83/300 (27%), Positives = 127/300 (42%), Gaps = 32/300 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M+   +I++M +L N +   SI                LLD +T  V+    P+  + PA
Sbjct: 27  MKIIFIIMSMFLLFNAYKLFSITLLQIEKVVLDAKSVVLLDCDTKCVLYSKNPNLVFPPA 86

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKL 110
           SLTKL+T Y      K++   L   + I    S        S    ++G  +T +  LK 
Sbjct: 87  SLTKLVTIYTALVEAKKQNIDLNAIVPISSSASYYNLPLDSSLMFLEEGHKVTFEELLKG 146

Query: 111 LIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           L+V S ND A+AIAE +   +   FV  MN+    L L  T F++  G     +  TA +
Sbjct: 147 LVVSSGNDAAIAIAEFIVGKDLNNFVNLMNDNVFKLKLINTSFVDTSG-YSKNNKITALE 205

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGK--------------KYPNTNWAVGTFLGADG 215
           MA+ +     +F   +    +K                     K  N N  +  +  ADG
Sbjct: 206 MALFAKTYIDEFEFMLKIHSLKDFIYPKPENLGSTSSSKMLNLKQDNKNILILNYPYADG 265

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVSASLLSMGFYNKTD 269
           +KTG+   SG N+VA+A + D  LIAVILG            R+ ++  L   GF + + 
Sbjct: 266 LKTGYIKTSGLNLVATAKKDDIRLIAVILGVSKGVDNIGEKKRSLIAQKLFEYGFDHYSK 325


>gi|251790099|ref|YP_003004820.1| D-alanyl-D-alanine endopeptidase [Dickeya zeae Ech1591]
 gi|247538720|gb|ACT07341.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Dickeya zeae
           Ech1591]
          Length = 319

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 95/254 (37%), Gaps = 8/254 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +++       +        ++D     V+  + PD     AS+TKLMTA VV    +   
Sbjct: 29  TSVTQPAPSRQEIASGSAMVVDLRNNDVLYSSNPDVVVPIASVTKLMTAMVVLDANQPLD 88

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L+  I+ +K         S  + GS ++  + L L ++ S N  A ++A       + 
Sbjct: 89  ERLSVDISQTKE---MQGVYSRVRLGSEISRHDMLLLALMSSENRAAASLAHHYRGGYQA 145

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F+  MN  +K LG++ T ++   G+      T      +L    +      +     K  
Sbjct: 146 FIAAMNAKAKALGMTHTRYVEPTGLSTSNVSTARDLTKLLIASKQYPLLGQLSTSHEKTA 205

Query: 194 EIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                 Y     NTN  +          KTGFT  +G  +V   +   + +  V+L A  
Sbjct: 206 VFTQPSYSLPFRNTNHLIYRQDWNIQLTKTGFTNQAGHCLVMRTVINGRPVSLVVLDAFG 265

Query: 249 RNTRNKVSASLLSM 262
           + T    +  L + 
Sbjct: 266 KFTHFADANRLRNW 279


>gi|157144931|ref|YP_001452250.1| D-alanyl-D-alanine endopeptidase [Citrobacter koseri ATCC BAA-895]
 gi|157082136|gb|ABV11814.1| hypothetical protein CKO_00660 [Citrobacter koseri ATCC BAA-895]
          Length = 311

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF                         ++D NT  VI  N+PD
Sbjct: 1   MLKFRVSLFSLALMLAVPFAPHAVAKTAAAAVASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV          L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFANPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTMINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|126348215|emb|CAJ89936.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 368

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 92/260 (35%), Gaps = 15/260 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P            + + D ++G V+A +       PAS  K + A  V   L      + 
Sbjct: 40  PGAPGVPDVSALSWVVADADSGDVLAAHDAHRRLPPASTLKTLFALTVLPVLPGG---IR 96

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +   +     P S+            + L   +  ++ + AV +  SL          
Sbjct: 97  HEVRGDELNGIGPGSSLVGIVEGHTYRVSDLWNGVFLNSGNDAVHVLASLTGGWDATAAR 156

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI----KGL 193
           M   ++ LG   TH  +  G    G  ++A D+A+       +     +  ++     G 
Sbjct: 157 MQAEARALGARDTHVRSPDGYDAPGQVSSAYDLAVFGRAGLRNPDFARYCAKVDAMFPGR 216

Query: 194 EIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                   NTN        V  + G  G+K G+T  +G  +VA+A +  ++L+  ++   
Sbjct: 217 NGDAYGIRNTNRLLTGEDGVEPYPGLIGIKNGYTSNAGNTLVAAARRDGRTLVVTVMNPQ 276

Query: 248 --DRNTRNKVSASLLSMGFY 265
               +   + + SLL  GF 
Sbjct: 277 EGGGHAVYEEARSLLDWGFE 296


>gi|309808134|ref|ZP_07702046.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 01V1-a]
 gi|308168603|gb|EFO70709.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 01V1-a]
          Length = 425

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 114/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLKLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSTKNADAENELSASDMGILIKHLLLEFPQVLD 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRISKLNFPDGRNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA         R   +  L +  + N +      +              P 
Sbjct: 298 GRRIVTVIIGARHLNGSDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKSSPI 357

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKE--SHFIDFEKITLLKNKI 333
                C  Q   I  +   K   +       +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKDQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|297201894|ref|ZP_06919291.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
 gi|297147997|gb|EDY56767.2| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
          Length = 463

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 93/292 (31%), Gaps = 34/292 (11%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEK 72
                 + +      + + D  +G V+A +       PAS  K++   T    F+  +  
Sbjct: 100 ASGVPVLPKDITARSWIVTDAESGDVLAAHNAHWRLPPASTMKMLFADTLLPKFAKAETH 159

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K + +    +   +S              + L   L+          AV +  ++ K   
Sbjct: 160 KVVPSDLAGMGAGSSLVGIKEGETYTVHDLWLGVFLRSGND------AVHVLSAMNKGVA 213

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
           K V  MN  ++ L    TH ++  G    G  ++A D+ + +         +  Y     
Sbjct: 214 KTVTEMNEHAEELQALDTHVVSPDGYDAPGQVSSAYDLTLFARSGLQK-KDFREYCSTVT 272

Query: 193 LEI--------------KGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASA 232
            +               K  +  NTN        +  + G  G+K G T  +G      A
Sbjct: 273 AKFPGETEKDKKGKAVRKPFEIQNTNRLLSGDYDISQYQGIAGVKNGNTTNAGATFTGVA 332

Query: 233 IQGDQSLIAVILGALDRNTR---NKVSASLLSMGFYNKTDRKKINYIIKDFY 281
            +  + L+  ++    +       K +A L   GF      + +  ++    
Sbjct: 333 ERNGRVLLVTVMN-PSKEEHNEVYKETAKLFDWGFKAAGKVQPVGELVPPKG 383


>gi|194367412|ref|YP_002030022.1| Serine-type D-Ala-D-Ala carboxypeptidase [Stenotrophomonas
           maltophilia R551-3]
 gi|194350216|gb|ACF53339.1| Serine-type D-Ala-D-Ala carboxypeptidase [Stenotrophomonas
           maltophilia R551-3]
          Length = 298

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 10/254 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            +  +    +           ++ +T  VI ++       PASLTKLMTAY  ++ L+E 
Sbjct: 29  AAFPYSPPDMPAPPTALSSITIEASTFEVIHQDNAGVARQPASLTKLMTAYAAYACLEEG 88

Query: 73  KAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                  +TI+                  G  ++L   L+ L++ S ND A+AIA  L  
Sbjct: 89  GRTWDEAVTIAAEDVHVVADDETRMGLVPGEKVSLARLLEGLMIVSGNDAALAIARHLDG 148

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           ++  F+  MN  ++ LGL +T F +  G+    H ++ARDMA+L+  +  D PQ +    
Sbjct: 149 SQSAFLDRMNQHARQLGLRSTWFASVSGITTPHHASSARDMAVLAACLLNDHPQILAVTA 208

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ--GDQ----SLIAVI 243
            +          N N  +G   G DG+KTG+T A+GF + A+A Q    +     LI V+
Sbjct: 209 QRAFAHGSFSRNNQNALLG-DDGVDGLKTGYTQAAGFCLAATACQPVPGRAHPVRLITVV 267

Query: 244 LGALDRNTRNKVSA 257
           LG+  R+ R+ ++ 
Sbjct: 268 LGSDSRDARDALAR 281


>gi|148266151|ref|YP_001232857.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacter uraniireducens
           Rf4]
 gi|146399651|gb|ABQ28284.1| Serine-type D-Ala-D-Ala carboxypeptidase [Geobacter uraniireducens
           Rf4]
          Length = 286

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 72/290 (24%), Positives = 122/290 (42%), Gaps = 15/290 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  + +A  +     +          Y +     G  +    P      ASLTK+MTA 
Sbjct: 7   LLATLMLAAGNGGAAEVPDPFPRMASAYLV--QIQGKTVWARRPVRRLPQASLTKIMTAI 64

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V    K     L   +T+S+ A+    S    + G    L++ L  ++V SAND   A+
Sbjct: 65  LVLERCK-----LDEVVTVSRRAAGETGSRIGLRVGERFRLEDLLAAMLVASANDACHAL 119

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           A+ L  +E++FV  MN  ++ LGL  + F NA G     HY+TARD+AIL+     +   
Sbjct: 120 ADHLAGSEERFVALMNARARGLGLDNSRFANACGHDAPNHYSTARDLAILAETALKNPAF 179

Query: 184 YMHYFQIK-----GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                  +         +     N N  +G  +G  G+KTG+T  +G  +VA A +    
Sbjct: 180 GRLVSSKRLKIRTVDRRRAFSLVNRNKLLGRSVGVSGVKTGYTENAGRCLVALAERDGTR 239

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           ++ V+L A     R + +  ++   F      +  N     F  ++  ++
Sbjct: 240 VLLVLLNAP---HRFRDAVVMIERAFAVAPPGRFGNRSTAPFSNRSGHHQ 286


>gi|254780698|ref|YP_003065111.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040375|gb|ACT57171.1| D-alanyl-D-alanine carboxypeptidase 1 penicillin-binding protein
           [Candidatus Liberibacter asiaticus str. psy62]
          Length = 336

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 85/256 (33%), Positives = 135/256 (52%), Gaps = 5/256 (1%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ +++ M+S      +  +        ++D N   +      D P  PASLTK+MT Y+
Sbjct: 34  ILFLSIIMISMASELHAKPK----YSSIVIDVNKNQMTGFKQ-DEPRYPASLTKMMTLYI 88

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F +L+ KK  L T I +SK A+   PS    K+ +  T +  +  LI +SAND++ A  
Sbjct: 89  IFEYLQSKKLHLNTQIPVSKTAATQNPSKLYLKEKTYFTTEQGILALITRSANDVSTAFG 148

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
           E +  +EKKF   M+N +K +G+  T + NA G+      TTARD AIL   ++ +FPQY
Sbjct: 149 EFISGSEKKFAILMSNKAKKIGMQNTIYKNASGLHDKNQITTARDQAILGILLRKNFPQY 208

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             YF I+    + +   N N  +      DG+KTG+T  SGFNIV S    D  ++AV++
Sbjct: 209 YKYFSIRKFRYRNRIITNHNKLLNKMHNIDGIKTGYTRNSGFNIVTSLRYKDDPIVAVVM 268

Query: 245 GALDRNTRNKVSASLL 260
           G      R++ +  L+
Sbjct: 269 GMPTSQERDQKALELI 284


>gi|94310149|ref|YP_583359.1| murein-DD-endopeptidase [Cupriavidus metallidurans CH34]
 gi|93354001|gb|ABF08090.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Cupriavidus
           metallidurans CH34]
          Length = 393

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 113/282 (40%), Gaps = 12/282 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   +     ++D NT  V+ +  P      AS+TKLMTA VV       +  +   +T+
Sbjct: 115 ALALRSSVALVMDQNTNEVLFQKNPTAVLPIASITKLMTALVVMDA----RLPMDEMLTV 170

Query: 83  SKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           ++   +    +S+  +  + +T    L L ++ S N  A A+  +       FV  MN  
Sbjct: 171 TEEDRDTEKHSSSRLRFGTQLTRQEMLLLALMSSENRAASALGRNYPGGLPAFVGAMNRK 230

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKK 199
           ++ LG+S +HF++++G+      +      +++   +    +         + +  +   
Sbjct: 231 ARELGMSDSHFVDSNGLSSSNVSSAMDLARLVNAAYRNPTIREYSTQPEHEVTVFGRPMH 290

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y +TN  V       G  KTG+   +G  +V      D++++ V L ++ + +R   +  
Sbjct: 291 YVSTNRLVRGGNWDIGLQKTGYISEAGQCLVMQTRVNDRNVVMVFLDSVGKLSRFADATR 350

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           + S        +   +   + F       + P     +  +Q
Sbjct: 351 VRSW----LEHQPATSAQPRPFPSNPNLTQGPKSPTAILVSQ 388


>gi|325681262|ref|ZP_08160792.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus albus 8]
 gi|324107184|gb|EGC01470.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus albus 8]
          Length = 468

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 58/385 (15%)

Query: 5   LVIIAMAMLSNIFPFLSIAET--------------NKLPYYTLLDTNTGHVIAENYPDHP 50
           L+     ++S+  P  ++                        +++ +TG  I +   D  
Sbjct: 11  LLCTFAVLVSSALPAGALTFKPTVRDENGELKDLRLYSECVYMINMDTGEEIVDINSDKE 70

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPIT-----ISKNASEYPPSNSTFKKGSTMTLD 105
             PASLTKLMTA V+   L   +  L                    S +  +   +++  
Sbjct: 71  VPPASLTKLMTAVVMLDELGGDEDALKAKKMSAGTEAFDELYGTGASTADIQPYESVSAY 130

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L   ++ SA + +  IA ++     +FV  MN     LGL  THF  AHG+    +++
Sbjct: 131 DLLAANLIPSACEASNIIAVNVGGNIPRFVDMMNEKVTELGLKHTHFSCAHGLFTQQNFS 190

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN------------TNWAVGTFLGA 213
           +A+D+A +      ++P +          ++   +                +    +   
Sbjct: 191 SAKDIAKICEYALDNYPVFKELVNTTFYTMEPTDFHPEGTSLTSTDFMINEYTDYYYSYC 250

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---------------------- 251
            G+KTG T A+G    + A     + + V LGA                           
Sbjct: 251 RGIKTGTTEAAGRCFASYATCDGATYLTVTLGAPMEKQPEDIKKGEEDPDSLYAAEDVYY 310

Query: 252 RNKVSASLLSMGFYNKTDRKKINYI-----IKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
                 +L    F     +  IN I     +K  Y + L       +          I  
Sbjct: 311 NFIDHINLYEWAFSTMVQKDFINEISEVRDVKVEYGKKLDYANLKPACGYSRMWPANIKV 370

Query: 307 NTQMKEAKDKESHFIDFEKITLLKN 331
               K    K+      EK  +L  
Sbjct: 371 EEVEKIVTVKDHIVAPVEKGDVLGK 395


>gi|224498349|ref|ZP_03666698.1| hypothetical protein LmonF1_01100 [Listeria monocytogenes Finland
           1988]
          Length = 269

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 6/243 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G ++ E   D     ASLTKLMTA++V   +  KK      + + + 
Sbjct: 29  LSAQSAAVFSVENGKMLYEKNADKVMPIASLTKLMTAFLVLEAVDNKKLSWDEQLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++V SAND A  +          F Q MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLVMSANDAAETLG--DRLEGASFPQKMNNEAKKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQI-KGLEIKGKKYP 201
           GLS  T F++A G+   G    +T +D+ +LS ++ +   + +        +  +G K  
Sbjct: 147 GLSNKTKFVSASGLDVDGEMAVSTTKDLFLLSSKLISTHSEVLETTSKSSIITEEGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G   G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLIGAIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDADTAEKRFKDTEQLMK 266

Query: 262 MGF 264
           +GF
Sbjct: 267 VGF 269


>gi|49184208|ref|YP_027460.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|49178135|gb|AAT53511.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
          Length = 434

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 15/301 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 43  VAPPPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 97

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 98  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 157

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 158 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 216

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 217 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 275

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E+ N  
Sbjct: 276 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEVKNVK 335

Query: 308 T 308
           T
Sbjct: 336 T 336


>gi|215447643|ref|ZP_03434395.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T85]
 gi|289759480|ref|ZP_06518858.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T85]
 gi|289715044|gb|EFD79056.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T85]
          Length = 405

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +                 + + D ++G VIA   P     PAS+ K++ A          
Sbjct: 79  IITAPGSAPAPGDVSAEAWLVADLDSGAVIAARDPHGRHRPASVIKVLVAM-----ASIN 133

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  + + +    +      G T T++  L  L++ S ND A A+A  L     
Sbjct: 134 TLTLNKSVAGTADDAAVEGTKVGVNTGGTYTVNQLLHGLLMHSGNDAAYALARQLGGMPA 193

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 194 AL-EKINLLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPVFADIVATRTF 252

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A +  + L+ V+L G 
Sbjct: 253 DFPGHGDHPGYELENDNQLLYNYPGALGGKTGYTDDAGQTFVGAANRDGRRLMTVLLHGT 312

Query: 247 LDRNTRNKVSASLLSMGFY 265
                  + +A LL  GF 
Sbjct: 313 RQPIPPWEQAAHLLDYGFN 331


>gi|308232419|ref|ZP_07415998.2| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308371314|ref|ZP_07424530.2| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu003]
 gi|308372505|ref|ZP_07428899.2| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu004]
 gi|308373707|ref|ZP_07433402.2| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu005]
 gi|308376077|ref|ZP_07445998.2| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu007]
 gi|308378277|ref|ZP_07482095.2| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu009]
 gi|308213997|gb|EFO73396.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308329169|gb|EFP18020.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333002|gb|EFP21853.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu004]
 gi|308336624|gb|EFP25475.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu005]
 gi|308344359|gb|EFP33210.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu007]
 gi|308353021|gb|EFP41872.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu009]
          Length = 392

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +                 + + D ++G VIA   P     PAS+ K++ A          
Sbjct: 66  IITAPGSAPAPGDVSAEAWLVADLDSGAVIAARDPHGRHRPASVIKVLVAM-----ASIN 120

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  + + +    +      G T T++  L  L++ S ND A A+A  L     
Sbjct: 121 TLTLNKSVAGTADDAAVEGTKVGVNTGGTYTVNQLLHGLLMHSGNDAAYALARQLGGMPA 180

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 181 AL-EKINLLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPVFADIVATRTF 239

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A +  + L+ V+L G 
Sbjct: 240 DFPGHGDHPGYELENDNQLLYNYPGALGGKTGYTDDAGQTFVGAANRDGRRLMTVLLHGT 299

Query: 247 LDRNTRNKVSASLLSMGFY 265
                  + +A LL  GF 
Sbjct: 300 RQPIPPWEQAAHLLDYGFN 318


>gi|15610466|ref|NP_217847.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis H37Rv]
 gi|15842925|ref|NP_337962.1| penicillin-binding protein, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31794515|ref|NP_857008.1| penicillin-binding protein DacB1 [Mycobacterium bovis AF2122/97]
 gi|121639258|ref|YP_979482.1| putative penicillin-binding protein dacB1 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663194|ref|YP_001284717.1| putative penicillin-binding protein DacB1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148824535|ref|YP_001289289.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis F11]
 gi|167967097|ref|ZP_02549374.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis H37Ra]
 gi|215405348|ref|ZP_03417529.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           02_1987]
 gi|215428820|ref|ZP_03426739.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T92]
 gi|215432297|ref|ZP_03430216.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           EAS054]
 gi|218755116|ref|ZP_03533912.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis GM
           1503]
 gi|219559395|ref|ZP_03538471.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T17]
 gi|224991755|ref|YP_002646444.1| putative penicillin-binding protein [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253800375|ref|YP_003033376.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233942|ref|ZP_04927267.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis C]
 gi|254365954|ref|ZP_04981999.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552436|ref|ZP_05142883.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188381|ref|ZP_05765855.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202603|ref|ZP_05770094.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T46]
 gi|260206688|ref|ZP_05774179.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis K85]
 gi|289445020|ref|ZP_06434764.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T46]
 gi|289449022|ref|ZP_06438766.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555609|ref|ZP_06444819.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis KZN
           605]
 gi|289571561|ref|ZP_06451788.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T17]
 gi|289576056|ref|ZP_06456283.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis K85]
 gi|289747151|ref|ZP_06506529.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis
           02_1987]
 gi|289752030|ref|ZP_06511408.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T92]
 gi|289755456|ref|ZP_06514834.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis
           EAS054]
 gi|289763521|ref|ZP_06522899.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis GM
           1503]
 gi|294995903|ref|ZP_06801594.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis 210]
 gi|297635986|ref|ZP_06953766.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732983|ref|ZP_06962101.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis KZN
           R506]
 gi|313660315|ref|ZP_07817195.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium tuberculosis KZN
           V2475]
 gi|2894240|emb|CAA17102.1| PROBABLE PENICILLIN-BINDING PROTEIN DACB1 (D-ALANYL-D-ALANINE
           CARBOXYPEPTIDASE) (DD-PEPTIDASE) (DD-CARBOXYPEPTIDASE)
           (PBP) (DD-TRANSPEPTIDASE) (SERINE-TYPE D-ALA-D-ALA
           CARBOXYPEPTIDASE) (D-AMINO ACID HYDROLASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13883259|gb|AAK47776.1| penicillin-binding protein, putative [Mycobacterium tuberculosis
           CDC1551]
 gi|31620111|emb|CAD95475.1| PROBABLE PENICILLIN-BINDING PROTEIN DACB1 (D-ALANYL-D-ALANINE
           CARBOXYPEPTIDASE) (DD-PEPTIDASE) (DD-CARBOXYPEPTIDASE)
           (PBP) (DD-TRANSPEPTIDASE) (SERINE-TYPE D-ALA-D-ALA
           CARBOXYPEPTIDASE) [Mycobacterium bovis AF2122/97]
 gi|121494906|emb|CAL73389.1| Probable penicillin-binding protein dacB1 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599471|gb|EAY58575.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis C]
 gi|134151467|gb|EBA43512.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507346|gb|ABQ75155.1| putative penicillin-binding protein DacB1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148723062|gb|ABR07687.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis F11]
 gi|224774870|dbj|BAH27676.1| putative penicillin-binding protein [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253321878|gb|ACT26481.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis KZN
           1435]
 gi|289417939|gb|EFD15179.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T46]
 gi|289421980|gb|EFD19181.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440241|gb|EFD22734.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis KZN
           605]
 gi|289540487|gb|EFD45065.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis K85]
 gi|289545315|gb|EFD48963.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T17]
 gi|289687679|gb|EFD55167.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis
           02_1987]
 gi|289692617|gb|EFD60046.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis T92]
 gi|289696043|gb|EFD63472.1| penicillin-binding protein DacB1 [Mycobacterium tuberculosis
           EAS054]
 gi|289711027|gb|EFD75043.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis GM
           1503]
 gi|323718003|gb|EGB27186.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326905171|gb|EGE52104.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis W-148]
 gi|328460108|gb|AEB05531.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis KZN
           4207]
          Length = 405

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +                 + + D ++G VIA   P     PAS+ K++ A          
Sbjct: 79  IITAPGSAPAPGDVSAEAWLVADLDSGAVIAARDPHGRHRPASVIKVLVAM-----ASIN 133

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  + + +    +      G T T++  L  L++ S ND A A+A  L     
Sbjct: 134 TLTLNKSVAGTADDAAVEGTKVGVNTGGTYTVNQLLHGLLMHSGNDAAYALARQLGGMPA 193

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHY 187
              + +N  +  LG   T      G+   G  T+A D+ +       +           +
Sbjct: 194 AL-EKINLLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPVFADIVATRTF 252

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GA 246
                 +  G +  N N  +  + GA G KTG+T  +G   V +A +  + L+ V+L G 
Sbjct: 253 DFPGHGDHPGYELENDNQLLYNYPGALGGKTGYTDDAGQTFVGAANRDGRRLMTVLLHGT 312

Query: 247 LDRNTRNKVSASLLSMGFY 265
                  + +A LL  GF 
Sbjct: 313 RQPIPPWEQAAHLLDYGFN 331


>gi|322385858|ref|ZP_08059501.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus cristatus
           ATCC 51100]
 gi|321270143|gb|EFX53060.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus cristatus
           ATCC 51100]
          Length = 447

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 150/404 (37%), Gaps = 73/404 (18%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           M++  ++  + + + + P  + A+                   +     ++D NTG ++ 
Sbjct: 1   MKKKFLVFGLILSAFLSPLSAAADELVDMARKMYPNENVQAINRPKSSLMIDGNTGDILW 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           ++  D   +PAS++K+MT Y+VF  +KE K  L T I  +                    
Sbjct: 61  QDNIDEVRDPASMSKIMTLYLVFEAIKEGKLSLDTVIKATPQDQAVAGIYEISNNKIVAG 120

Query: 104 LDNALKLLIVKSANDIAVAI-----AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
           ++  +  LI  +    + A                F+  MN  ++ LG++ T + NA G 
Sbjct: 121 VNYTVSELITMTVVPSSNATTVMLANYLSDNDPDAFLDKMNAKAQELGMTNTKWFNASGA 180

Query: 159 VQH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+ IL +    ++P  ++Y     + +K       
Sbjct: 181 AAVSFKGYYTPQRYNNYASNQTTARDLGILVYNFVKNYPDILNYTNQAKVTVKAGTPYEE 240

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DG+KTG +    FN +A+  +G+Q +I VI+G  D      
Sbjct: 241 TFETYNYSLPGARYALEGVDGLKTGSSPNGAFNYIATVKRGNQRVIGVIMGVGDWADQDG 300

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
              R+    +L+   + +   +K  +       +Q +  +  N+ E+   T K+      
Sbjct: 301 EYYRHPFGNALIEKSYADYEYKKLFSKG-----KQEIDGKTYNLPEDFYATIKKDAKVKP 355

Query: 309 QMKEA-----------KDKESHFIDFEKITLL-----KNKITKK 336
            ++               K S  +  E++        K ++TKK
Sbjct: 356 AVENGVLKAGNDLYTLSPKISDEMKVEEVDASVTQSAKEEVTKK 399


>gi|118617619|ref|YP_905951.1| D-alanyl-D-alanine carboxypeptidase DacB [Mycobacterium ulcerans
           Agy99]
 gi|118569729|gb|ABL04480.1| D-alanyl-D-alanine carboxypeptidase DacB [Mycobacterium ulcerans
           Agy99]
          Length = 290

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 93/250 (37%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D +TG V+A    +    PAS  K++ A V           L + +   
Sbjct: 37  PDGPAQTWIVADLDTGQVLAGRDQNVTHPPASTIKVLLALVALDE-----LNLNSTVVAD 91

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +  +    +    K G T T    L  L++ S ND A  +A+ L   +   V  MN  + 
Sbjct: 92  EADTHVECNCVGVKAGHTYTARQLLDGLLLVSGNDAANTLAQ-LLGGQDAAVAKMNAKAA 150

Query: 144 NLGLSATHFMNAHGVVQHG--HYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            LG   TH     G+   G   ++TA D+A++      +            +   E    
Sbjct: 151 ALGAMNTHAATPSGLDGPGGSGWSTAHDLAVIFRTAMANPVFAHITAEPSAMFPGEDGEH 210

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTG+T A+    V +A +  + L+  ++         T    
Sbjct: 211 PIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARNGRRLVIAMMYGLVKEGGPTYWDQ 270

Query: 256 SASLLSMGFY 265
           + SL   GF 
Sbjct: 271 AGSLFDWGFA 280


>gi|257064043|ref|YP_003143715.1| D-alanyl-D-alanine carboxypeptidase [Slackia heliotrinireducens DSM
           20476]
 gi|256791696|gb|ACV22366.1| D-alanyl-D-alanine carboxypeptidase [Slackia heliotrinireducens DSM
           20476]
          Length = 464

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 126/340 (37%), Gaps = 37/340 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++  + G V  E   D     AS+TK+MTA V           L T +T+S
Sbjct: 73  PDISSECAIVV-GDDGTVYYERNADQQHQIASITKIMTAIVALENAD-----LNTEVTVS 126

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--------KFV 135
           K ++    S++  K+G TM L  AL  L++ S ND  +AIAE++              FV
Sbjct: 127 KASATVGESSANLKEGDTMDLRTALMCLLIPSGNDAGIAIAETVGTIMDPSASDPQAVFV 186

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQH----GHYTTARDMAILSWR--------IKTDFPQ 183
             MN  ++ LG + THF N HG+         +++ARD+  ++                 
Sbjct: 187 SAMNAKAEELGCTNTHFTNPHGLDADKWGSDMHSSARDVVTMARYAMSYDTFAEIVQMGD 246

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                  K  + +      T+  +  + G  G+KTG +  + F       +GD++   V+
Sbjct: 247 TTVTVTGKDNKARDNWLDATDDLLEEYEGMRGVKTGSSVLADFCFSGCVTRGDETFYTVV 306

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYI-----------IKDFYQQNLSNEVPNI 292
           LG    + R   + +L+   F +      IN             + D    +  N     
Sbjct: 307 LGNATSDERFGDTITLMDWAFGSTVHTDFINSDFVISEEDPRPYVADVTLLDWPNRTVKA 366

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           + +      ++      +++         D EK  ++   
Sbjct: 367 TVDDEGEVFDLFLPEGDIEQVVSYVRIMGDVEKGDIVGRL 406


>gi|218559053|ref|YP_002391966.1| D-alanyl-D-alanine endopeptidase [Escherichia coli S88]
 gi|218365822|emb|CAR03562.1| D-alanyl-D-alanine endopeptidase [Escherichia coli S88]
 gi|307626324|gb|ADN70628.1| D-alanyl-D-alanine endopeptidase [Escherichia coli UM146]
          Length = 310

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+   +    +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 23  AVAKTVAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 82

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 83  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 139

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 140 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 198

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 199 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 258

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 259 DAFGKYTHFADASRLRTW 276


>gi|327253261|gb|EGE64915.1| D-alanyl-D-alanine endopeptidase [Escherichia coli STEC_7v]
          Length = 310

 Score =  127 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPFAPQAVAKTAVATTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++    L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKEML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|228477390|ref|ZP_04062026.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus salivarius
           SK126]
 gi|228250825|gb|EEK10013.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus salivarius
           SK126]
          Length = 446

 Score =  127 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 140/381 (36%), Gaps = 52/381 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------------KLPYYTLLDTNTGHVIAE 44
           M++ L+ + +     + P LS A+                  +     L+D NTG ++ +
Sbjct: 1   MKKKLLGLFLVASLALAPSLSSADQLVDIAQKAGYKEATETYRPKSSLLIDANTGDILWQ 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN-----ASEYPPSNSTFKKG 99
           +  D   +PAS++K M+ Y+VF  L + +    T IT               +N      
Sbjct: 61  DNIDEVRDPASMSKAMSLYLVFDALSKGEIKEDTVITAKPTDEAIANIYEISNNKIVSGV 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-- 157
                +      +  S     +           K++  MN  SK LG++ T + NA G  
Sbjct: 121 KYTVSELITMTAVPSSNAATVMLANYLSDNDPDKWIDRMNEKSKELGMTNTKWYNASGAG 180

Query: 158 -------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                           H + TTARD++I+++ +    P+ + Y   + + +K        
Sbjct: 181 AASYKGYYTPKRYDNNHSNQTTARDLSIMAYNLIKHHPEILKYTSQQTVTVKKGTPYEET 240

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDR 249
           +    +          G DG+KTG +    +N +++  +G+Q +I+VILG          
Sbjct: 241 FENYNYSLPGADYGLKGVDGLKTGSSPRGDYNYISTCKRGNQRVISVILGVGNWEDESSE 300

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             R+    SL+   F + + +K ++   +        +   ++   V   Q+  I+    
Sbjct: 301 KIRHAFGNSLIEKMFKDYSYKKVLSKGKQKI-DGKKYDVQKDVYATVKKGQEPKISVKND 359

Query: 310 MKEAKDKESHFIDFEKITLLK 330
                +         K + +K
Sbjct: 360 YVLVDNGLKTVSPKIKASTVK 380


>gi|330999158|ref|ZP_08322877.1| serine-type D-Ala-D-Ala carboxypeptidase [Parasutterella
           excrementihominis YIT 11859]
 gi|329575358|gb|EGG56902.1| serine-type D-Ala-D-Ala carboxypeptidase [Parasutterella
           excrementihominis YIT 11859]
          Length = 388

 Score =  127 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 7/246 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S             D +T  V+ E   D P   AS+TKLMTA V+          L   
Sbjct: 137 SSDPLGLSSTAVLAYDMDTNQVLYEKNADQPLPIASITKLMTALVIVESG----VNLDDK 192

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            T+++       ++S  + G  ++   AL L ++ S N  A  +A +    + +F++ MN
Sbjct: 193 FTVTREDFVPSSAHSKLRMGMEISRRQALHLALMSSDNRAAHFLARTYPTGKAQFIKEMN 252

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +  LG+  + F ++ G+      +      +++   +    + +         I  ++
Sbjct: 253 IKAALLGMKDSVFYDSIGLNNDNRSSAVDLSYLITGASEYALIRELSTTPEASFRIGKRE 312

Query: 200 Y--PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                TN  +       +  KTG T A+G+ +V  A    +++  + L + ++  R   +
Sbjct: 313 VISSTTNRLIKDEDWDIELQKTGLTTAAGYCMVMQAHVDGKNVAFIFLDSPNKYARANDA 372

Query: 257 ASLLSM 262
             L S 
Sbjct: 373 EKLRSY 378


>gi|317051485|ref|YP_004112601.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfurispirillum
           indicum S5]
 gi|316946569|gb|ADU66045.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfurispirillum
           indicum S5]
          Length = 341

 Score =  127 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 105/257 (40%), Gaps = 13/257 (5%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            E ++L    ++D N   ++           ASLTK+     +   +++        +  
Sbjct: 89  PEASQLGAIIVVDANRQEIVYAKNLHEVMPIASLTKVFLMEELLDRIQQGALTFDKELRA 148

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF-VQHMNNT 141
           S  +S    S    ++    T++   K  ++ SAND A  + E +   +     Q +   
Sbjct: 149 STRSSLIGGSRVYLREHENTTIEQLAKATMIHSANDAAYLLGEVIGGGDANHAAQLLTAK 208

Query: 142 SKNLGLSATHFMNAHGVVQHG---HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           ++ LGL  T   N +G+   G   + +T  ++A  ++++    P+       +    +  
Sbjct: 209 AQTLGLKNTRLYNVNGLPNRGGPDNISTPYELAQFTFKLMARNPEIFEIASTEVDYFRRP 268

Query: 199 K-----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N N  +       G+KTG+T ++GF ++ ++ + +++LI VIL A     R+
Sbjct: 269 GGQDFLLVNRNRPLVRLDYVTGLKTGYTNSAGFCVITTSNKNNRNLITVILNAPSSQIRD 328

Query: 254 KVSASLLSMGFYNKTDR 270
           + +  L+     + +  
Sbjct: 329 RAAKRLID----HFSTI 341


>gi|108798187|ref|YP_638384.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. MCS]
 gi|119867283|ref|YP_937235.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. KMS]
 gi|108768606|gb|ABG07328.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. MCS]
 gi|119693372|gb|ABL90445.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. KMS]
          Length = 410

 Score =  127 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 14/259 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +                 + + D +TG VIA   P     PAS+ K++ A          
Sbjct: 86  IITAPGAPPAPADVSAEAWLVADMDTGEVIAARDPHGRHRPASVIKVLIAIQSLKE---- 141

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  +        ++     G   T+++ L  L++ S ND A A+A  L   + 
Sbjct: 142 -LNLAKAVPGTPEDGAAEGTSVGVDVGGLYTVNDLLHGLLMYSGNDAAHALARQLGGMDT 200

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
             ++  N  +  LG   T      G+   G  T+A D+A+         P +      + 
Sbjct: 201 ALLKL-NQLAGKLGGRDTRVATPSGLDGPGMSTSAYDIALFYRY-AWRNPTFTEIVATRT 258

Query: 193 LEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-G 245
            +             N    +  + GA G KTGFT  +G   V  A +  + L+AV+L G
Sbjct: 259 YDFPGRDGNPPYPIENDVKLLYNYPGALGGKTGFTDDAGQTFVGGAERDGRRLVAVLLRG 318

Query: 246 ALDRNTRNKVSASLLSMGF 264
                   + +A LL  GF
Sbjct: 319 TRQPIAPWEQAARLLDYGF 337


>gi|126433845|ref|YP_001069536.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. JLS]
 gi|126233645|gb|ABN97045.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium sp. JLS]
          Length = 410

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 14/259 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +                 + + D +TG VIA   P     PAS+ K++ A          
Sbjct: 86  IITAPGAPPAPADVSAEAWLVADMDTGEVIAARDPHGRHRPASVIKVLIAIQSLKE---- 141

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  +        ++     G   T+++ L  L++ S ND A A+A  L   + 
Sbjct: 142 -LNLAKAVPGTPEDGAAEGTSVGVDVGGLYTVNDLLHGLLMYSGNDAAHALARQLGGMDT 200

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
             ++  N  +  LG   T      G+   G  T+A D+A+         P +      + 
Sbjct: 201 ALLKL-NQLAGKLGGRDTRVATPSGLDGPGMSTSAYDVALFYRY-AWRNPTFTEIVATRT 258

Query: 193 LEI------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-G 245
            +             N    +  + GA G KTGFT  +G   V  A +  + L+AV+L G
Sbjct: 259 YDFPGRDGNPPYPIENDVKLLYNYPGALGGKTGFTDDAGQTFVGGAERDGRRLVAVLLRG 318

Query: 246 ALDRNTRNKVSASLLSMGF 264
                   + +A LL  GF
Sbjct: 319 TRQPIAPWEQAARLLDYGF 337


>gi|329938089|ref|ZP_08287540.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
 gi|329302578|gb|EGG46468.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
          Length = 467

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 93/331 (28%), Gaps = 23/331 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D   G V+A +       PAS  K++ A  +             
Sbjct: 114 APVLPKDLTARSWIVADAENGDVLAAHNAHWRLPPASTLKMLFADTLLPKFPR---TTEH 170

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +  S  A     S+              L L +   + + AV +  ++       VQ M
Sbjct: 171 EVAASDLAGMGAGSSVVPLHKGETYSVRDLWLGVFLKSGNDAVHVLSAMNGGVAATVQDM 230

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
              ++ L    T  ++  G       ++A D+ +++           +   +K       
Sbjct: 231 RAHAEELRALDTTVVSPDGYDAPKQVSSAYDLTLIARSGLQKKDFREYCATVKTSFPGKT 290

Query: 199 K------------YPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                          NTN        V  + G  G+K G T  +G      A +G + L+
Sbjct: 291 TKSGGKKSRKTFEIRNTNRLLAGDTDVPAYPGLAGVKNGNTTEAGATFTGVAERGGRVLL 350

Query: 241 AVILGALD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
             ++   D   N   K +A LL  GF        +  ++        S+   +      T
Sbjct: 351 VTVMNPEDHGHNEVYKEAARLLDWGFSAAGKATPVGELVAPEGAAGDSSAAGDAGTPTAT 410

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                                        LL
Sbjct: 411 PAPSTEPVAAAAARGGSGGMGVALGVAGGLL 441


>gi|228932656|ref|ZP_04095531.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827028|gb|EEM72787.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 407

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 15/301 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 16  VAPPPKEGPNVFSQFATTIDAKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 70

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T+S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 71  PEDQFTLSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 130

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 131 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 189

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 190 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 248

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y           S E+   + E  N  
Sbjct: 249 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIESELEKSAELMLKKDEGKNVK 308

Query: 308 T 308
           T
Sbjct: 309 T 309


>gi|315445089|ref|YP_004077968.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium sp. Spyr1]
 gi|315263392|gb|ADU00134.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium sp. Spyr1]
          Length = 277

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 28/285 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----------------ETNKLPYYTLLDTNTGHVIA 43
           MR+ L  +A A+ + +   +S+A                        + + D +TG V+A
Sbjct: 1   MRRRLAGLAFALGALLTASVSVAAPGVAQPAAQPAAAQPIPDGPAKAWLVADLDTGRVLA 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
              P   + PAS  K++ A  V            +    +++ ++   S +    G   T
Sbjct: 61  SKDPYGTYAPASTIKVLLAMTVLDH-----LRPDSFARANESHTKIECSCAGLTPGQAYT 115

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQH 161
               +  +++ S ND A  + + L          MN  +  +G  +T   +  G+     
Sbjct: 116 TAQLVSAILMVSGNDAATMLGDMLGGQRVAV-AAMNRKAALVGARSTKASSTSGLDGPGW 174

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              TT  D+A++       +P      +       GK   N N  +  + G  G KTGFT
Sbjct: 175 ESVTTPHDLAVIMRAAL-KYPLIAQIMRSPTAPFPGKTLHNQNELLSRYPGDLGGKTGFT 233

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             +    V +A +G++ L+ V +           +  LL  GF  
Sbjct: 234 NLARKTYVGAAQRGNRRLVVVQMYGTG--DLYGQAMQLLDYGFSQ 276


>gi|297155472|gb|ADI05184.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces bingchenggensis
           BCW-1]
          Length = 302

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 75/294 (25%), Positives = 121/294 (41%), Gaps = 26/294 (8%)

Query: 1   MRQF--LVIIAMAMLSNIFPFLSI-----AETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           MR++   VI + A +S + P  +                LLD +    +     D     
Sbjct: 1   MRRWGAAVIASTAAVSVVLPVSTAQAAGGPSGISAKGAYLLDNSANKQLWAKAADTKRPM 60

Query: 54  ASLTKLMTAYVVFSFLKEK-KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           AS TKLMTA VV           +T   +     +    S +  KKG  +T+   L  L+
Sbjct: 61  ASTTKLMTAVVVLDSRGLNLSKKVTVKQSYIDYVARVGGSKADLKKGDKLTVKQLLYGLM 120

Query: 113 VKSANDIAVAIAESL------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-VQHGHYT 165
           + S  D A+A+A++        K  K F+  MN  +  LG++ TH+    G+     +YT
Sbjct: 121 LPSGCDAAMALADTFGTGDTTAKRTKSFISQMNKKASALGMTKTHYDTFDGISYGGQNYT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYFQI--------KGLEIKGKKYPNTNWAVGTFLGADGMK 217
           T RDMA L+     +         +             +   + NTN  +G++ GA G+K
Sbjct: 181 TPRDMAKLARHALGNSTLSTVVKSVDTVQKAPAANGRTRTYSWNNTNRLLGSYSGAIGIK 240

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           TG   A G  +V +A +  ++++ VIL A     R   +  +L   F + T  K
Sbjct: 241 TGTGTAPGRCLVFAAKRNGRTVVGVILNAP---KRYPDAKKMLDWAFNSTTTVK 291


>gi|145224759|ref|YP_001135437.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           gilvum PYR-GCK]
 gi|145217245|gb|ABP46649.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           gilvum PYR-GCK]
          Length = 277

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 28/285 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----------------ETNKLPYYTLLDTNTGHVIA 43
           MR+ L  +A A+ + +   +S+A                        + + D +TG V+A
Sbjct: 1   MRRRLAGLAFALGALLTASVSVAAPGIAQPAAQPAAAQPIPDGPAKAWLVADLDTGRVLA 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
              P   + PAS  K++ A  V            +    +++ ++   S +    G   T
Sbjct: 61  SKDPYGTYAPASTIKVLLAMTVLDH-----LRPDSFARANESHTKIECSCAGLTPGQAYT 115

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQH 161
               +  +++ S ND A  + + L          MN  +  +G  +T   +  G+     
Sbjct: 116 TAQLVSAILMVSGNDAATMLGDMLGGQRVAV-AAMNRKAALVGARSTKASSTSGLDGPGW 174

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              TT  D+A++       +P      +       GK   N N  +  + G  G KTGFT
Sbjct: 175 ESVTTPHDLAVIMRAAL-KYPLIAQIMRSPTAPFPGKTLHNQNELLSRYPGDLGGKTGFT 233

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             +    V +A +G++ L+ V +           +  LL  GF  
Sbjct: 234 NLARKTYVGAAQRGNRRLVVVQMYGTG--DLYGQAMQLLDYGFSQ 276


>gi|290962655|ref|YP_003493837.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260652181|emb|CBG75313.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei
           87.22]
          Length = 399

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 95/254 (37%), Gaps = 15/254 (5%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            +      + + D  +G V+A +       PAS  K + A  V   L      L   +  
Sbjct: 74  PQDLSAVSWLVADAGSGEVLAAHDAHRRLPPASTLKTLFALTVLPGLPAG---LRHTVKS 130

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            + A     S+    K +       L   +  S+ + AV +  SL    K   + M   +
Sbjct: 131 EELAGIGAGSSLVGVKENNTYTVADLWRGVFLSSGNDAVRVLASLNGGWKATTEQMQAKA 190

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY-- 200
           + LG   TH ++  G    G  ++A D+A+       +  ++  Y            +  
Sbjct: 191 RALGARDTHVVSPDGYDAPGQVSSAYDLAVFGRAGLRN-AEFAGYCATATATFPAGGWSY 249

Query: 201 --PNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR- 252
              NTN       V  + G  G+K G+T  +G  +VA+A +G ++L+  ++         
Sbjct: 250 GIQNTNRLLTGAGVEPYPGLIGVKNGYTTNAGNTLVAAAKRGGRTLVVTVMRPESGGGHA 309

Query: 253 -NKVSASLLSMGFY 265
             + + SLL  GF 
Sbjct: 310 VYEEARSLLDWGFR 323


>gi|207582659|gb|ACI24891.1| D-alanyl-D-alanine carboxypeptidase-like protein [uncultured
           bacterium]
          Length = 179

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 2/168 (1%)

Query: 2   RQFLVIIAMAMLSNIFPF--LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++  +++ + +    +    +          Y L+D ++G+V+ EN  D    PASLTKL
Sbjct: 8   KRLCLLVPLIVTPAAWAVEMMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLPPASLTKL 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTAY+    ++  +     P+T+S+NA     S    K G+ +++ + L  +I++S ND 
Sbjct: 68  MTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGTQVSVSDLLHGIIIQSGNDA 127

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           +VA++E +  +E  F   MN T+  LG+S +HFMN  G+    HY++A
Sbjct: 128 SVALSEHIAGSEDAFADMMNKTAGELGMSNSHFMNPTGLPNPDHYSSA 175


>gi|118469695|ref|YP_886773.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118170982|gb|ABK71878.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 296

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 93/255 (36%), Gaps = 14/255 (5%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                      + + D +TG ++A         PAS  K + A VV          L + 
Sbjct: 39  SVAPPEGPAETWVVADMDTGQILAGRGEYVRHAPASTIKTLLALVVLDE-----VPLDST 93

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           I   +  ++   + +    G T T    L+  ++ S ND A  +A  +    +  V  MN
Sbjct: 94  IVADETDTDVECNCAGVAPGRTYTARQLLEAALLASGNDAANTLAR-MLGGPEAAVAKMN 152

Query: 140 NTSKNLGLSATHFMNAHGVVQHGH--YTTARDMAILSWRIKTDF---PQYMHYFQIKGLE 194
             +  LG   T+ +   G+   G   ++T  D+A++      D            +   +
Sbjct: 153 AKAAQLGARDTNVVTPSGLDAPGMPFWSTPHDLAVIFRAAMADPVFAQITAMPSTVFPAK 212

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNT 251
              +   N N  +  + G  G KTGFT  +    VA+A +  + L+  ++         T
Sbjct: 213 TGDRVLVNQNELLHRYPGTLGGKTGFTDIARKTFVAAAQRDGRRLVIAMMYGLVKEGGPT 272

Query: 252 RNKVSASLLSMGFYN 266
               +A LL  GF  
Sbjct: 273 YWDQAAGLLDWGFAQ 287


>gi|301299364|ref|ZP_07205646.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300853035|gb|EFK80637.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 384

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 64/363 (17%), Positives = 137/363 (37%), Gaps = 35/363 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFL---SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           + +L+++ + +       +     A+        ++D  TG V+ +   +  +  ASLTK
Sbjct: 6   KNWLILVMLGIAIITGSGIMRGVKADKIDAKAAYMIDAGTGQVLYQQNANSKYPIASLTK 65

Query: 59  LMTAYVVFSFLKEKKAMLTTPI----TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           ++T  V+   +  +K      I     +S  A+ +  SN    +G + T+ + ++ +++ 
Sbjct: 66  ILTIAVIMKDIHNQKLSWDQKIKVNKDVSDMANNWQYSNVQLNEGESYTVKSLVESMMIV 125

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------Q 160
           SA+    A+A +   + K F + M   +   G++     N  G+                
Sbjct: 126 SADGSTEALALADAGSVKAFNEKMKEVAHEAGVTDAEIYNMIGLPNSDLGNLKLKNVGDD 185

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--------- 211
             +  +A+D+A++S  +  ++P+ +   + K ++ K       N     ++         
Sbjct: 186 QENKFSAKDIALISKYLVNNYPEVIDITKQKNVDFKISDDQTYNMENINYMLEGSYAAPK 245

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
               DG+KTGFT  +G+  V +     Q +I VIL A D   +   +  ++     N   
Sbjct: 246 NGTIDGLKTGFTDEAGYCFVGTGTFNGQRVITVILNASDYKKQFSETNKMIESVMNN--- 302

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            K +N       +Q L  E   +++      K       + K             K   +
Sbjct: 303 DKVVNTKDIKSVKQALKKENLKVNDTNIWVAKNTDPKQIKAKLTLSNGKIKAKNAKNEKV 362

Query: 330 KNK 332
              
Sbjct: 363 GTI 365


>gi|311278881|ref|YP_003941112.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Enterobacter
           cloacae SCF1]
 gi|308748076|gb|ADO47828.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Enterobacter
           cloacae SCF1]
          Length = 314

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D NT  VI  + PD     AS+TKLMTA VV     
Sbjct: 23  AIAKPAATTTASKPDIASGSAMIVDLNTNQVIYASDPDLVRPMASITKLMTAMVVLDA-- 80

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                L   + +      E     S  +  S ++  N L L ++ S N  A ++A     
Sbjct: 81  --HLPLDEMLKVDISQTPEMKGVYSRVRLNSEISRKNMLLLALMSSENRAAASLAHHYPG 138

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  +K LG++ T ++   G+    + +TARD+  L      + +       
Sbjct: 139 GYDAFIRAMNAKAKALGMTHTRYVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTT 197

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  +V   +  ++ +  V+
Sbjct: 198 KEDTATFRNPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVMNNRPVAMVV 257

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 258 MDAFGKYTHFADASRLRTW 276


>gi|300703920|ref|YP_003745522.1| d-alanyl-d-alanine carboxypeptidase [Ralstonia solanacearum
           CFBP2957]
 gi|299071583|emb|CBJ42907.1| D-Alanyl-D-alanine carboxypeptidase [Ralstonia solanacearum
           CFBP2957]
          Length = 375

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D  +G V+ +         AS+TKLMTA VV    +     +  
Sbjct: 95  ATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDTHQP----MDE 150

Query: 79  PITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + I+++  +Y  +  +  +  + +T ++ L L ++ S N  A A+  S       FV  
Sbjct: 151 LLEITEDDRDYERNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAA 210

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +  LG++ TH+++++G+      +      I+    K    +         +   G
Sbjct: 211 MNRKAHELGMNDTHYVDSNGLSSSNVSSAMDLAKIVMAAYKVPLIRQFTTTAEHTVNANG 270

Query: 198 KKYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +     NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR  
Sbjct: 271 RTLHYVNTNRLVRGGEWEIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFA 330

Query: 255 VSASLLSM 262
            +  + + 
Sbjct: 331 DAVRVRNW 338


>gi|317509103|ref|ZP_07966732.1| D-alanyl-D-alanine carboxypeptidase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252632|gb|EFV12073.1| D-alanyl-D-alanine carboxypeptidase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 303

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 15/250 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G ++A   P     PAS  K + A  V          L + +T +
Sbjct: 51  PDGPADAWLVADMDSGEILAAKNPYAYHPPASTIKTLLALTVIDEAP-----LDSAVTAT 105

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K+           K G   T+   L  L++ S ND A  +AESL   +    + MN  ++
Sbjct: 106 KDDLAECSCV-GIKPGHDYTIRQLLDALLLVSGNDAANTLAESLGGFDSAVAK-MNAKAQ 163

Query: 144 NLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            +G + TH  +  G+       +TT  D+A++                   +   +    
Sbjct: 164 EIGATDTHTGSPSGLDWPGMEMHTTPHDLAVIFREALNRPLFAEITAEPSAMFPGDGGEN 223

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL---GALDRNTRNKV 255
           +  N +  +  + GA G KTGFT A+    V +A +  + L+  ++         T    
Sbjct: 224 EIHNQDELLSLYPGALGGKTGFTNAAKKTFVGAAERDGRRLVVAMMYGLNTPGNPTYWDQ 283

Query: 256 SASLLSMGFY 265
           + +LL  GF 
Sbjct: 284 AQALLDWGFA 293


>gi|239942599|ref|ZP_04694536.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
 gi|239989058|ref|ZP_04709722.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
 gi|291446061|ref|ZP_06585451.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
 gi|291349008|gb|EFE75912.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
          Length = 299

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 15/270 (5%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A  S        A         L++  TG  +     D      S TK+MTA VV S   
Sbjct: 29  AFASTAHAATPPAPKIVAKGGFLMNDGTGKTLFTKSADTRRATGSTTKIMTALVVLSQKN 88

Query: 71  EKKAM-LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 +T     S        S++    G  +T+   L  L++ S  D A A+A+    
Sbjct: 89  VNLKSKVTIQKAYSDYIVSKNASSARLIVGDKVTVGQLLYGLMLPSGCDAAYALADKFGS 148

Query: 130 TEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
              +  +       MN+T+K+L L  T F +  G+    +Y+T RD+  ++ +   +   
Sbjct: 149 GSTRAARVKSFIGKMNSTAKSLKLKNTRFDSFDGIGNGNNYSTPRDLTKIASQAMKNSTF 208

Query: 184 Y--------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                          K    +   + NTN  +G++ GA G+KTG    + + +V +A + 
Sbjct: 209 RSVVKTKSTKQKVTTKSGGYRYMSWTNTNKLLGSYSGATGVKTGSGPTAKYCLVFAATRK 268

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +++I  +L +     R   +  ++  GF 
Sbjct: 269 GKTVIGTVLTSTSEANRTADAKKMMDYGFK 298


>gi|307330670|ref|ZP_07609808.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
 gi|306883649|gb|EFN14697.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
          Length = 544

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 91/281 (32%), Gaps = 26/281 (9%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAM 75
             ++ +      + + D  +G V+A +       PAS  K++   T        K  K  
Sbjct: 200 APALPKELSGKSWLVADAQSGDVLASHNAHWQLPPASTLKMLFADTLLPKMPKTKTHKVQ 259

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L+    + + +S      +       + L   L+          AV +  ++       V
Sbjct: 260 LSDLEGMGEGSSLVGVKENYTYSVHDLWLGVFLRSGND------AVHVLSAMNGGVPATV 313

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             M   +K+L    TH +   G  + G  ++A D+ + +           +         
Sbjct: 314 SEMQAHAKHLNAGDTHVVTPDGYDEKGQVSSAYDLTLFARSGLQKADFREYCSTATAQFP 373

Query: 196 KGKK----------YPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
              +            NTN       V  + G  G+K G T  +G      A +G + L+
Sbjct: 374 GTFEKGKKKRSSFGIQNTNRLLTGFGVEPYKGIAGVKNGNTTNAGATFTGVAQRGGRVLL 433

Query: 241 AVILGALDRNT--RNKVSASLLSMGFYNKTDRKKINYIIKD 279
             ++   ++      K +A L   GF        +  +++ 
Sbjct: 434 VTVMNPQEKEANEVYKETARLFDWGFKAAGSVNPVGTLVRP 474


>gi|312872197|ref|ZP_07732270.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092281|gb|EFQ50652.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           2062A-h1]
          Length = 425

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 117/344 (34%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNITQKLPVASMSKLLTIYLTLKAIKAGKISWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSTKNADAENELSASDMGILIKHLLLEFPQVLE 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L+     K  K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRIAKLDFLDGRKTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 298 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 357

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|82543546|ref|YP_407493.1| D-alanyl-D-alanine endopeptidase [Shigella boydii Sb227]
 gi|81244957|gb|ABB65665.1| penicillin-binding protein 7 [Shigella boydii Sb227]
 gi|320184846|gb|EFW59636.1| Murein-DD-endopeptidase [Shigella flexneri CDC 796-83]
          Length = 313

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 26  AVAKTAAAITASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 85

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 86  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 142

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 143 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 201

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 202 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 261

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 262 DAFGKYTHFADASRLRTW 279


>gi|191170132|ref|ZP_03031686.1| penicillin-binding protein 7 [Escherichia coli F11]
 gi|190909648|gb|EDV69233.1| penicillin-binding protein 7 [Escherichia coli F11]
          Length = 297

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+   +    +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 10  AVAKTVAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 69

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 70  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 126

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 127 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 185

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 186 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 245

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 246 DAFGKYTHFADASRLRTW 263


>gi|313887666|ref|ZP_07821348.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846275|gb|EFR33654.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 456

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 135/318 (42%), Gaps = 17/318 (5%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             Y L D  +G ++     D     AS +KL++ +VV   ++E K  L   + I K A+ 
Sbjct: 95  KSYLLGDYKSGQILEGYNLDEIRAMASTSKLVSIFVVLDKIQEGKISLNDEVEIDKEAAA 154

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S+   K+G  +T++  ++  +V S ND   A+ + +  +   FV+ MN+   +LGL 
Sbjct: 155 LTGSSFKLKEGDKVTVEKLIEASMVVSGNDAITALGKHVAGSTDAFVKMMNDKCHDLGLK 214

Query: 149 ATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PN 202
               +N  G+  +     +  T R+M +L+  +    P+ + Y  I  LE  G+ +   N
Sbjct: 215 NALMVNPTGLTNYEILDYNKMTTREMFMLASELIKFHPEILKYTTIAKLEDPGRNFIEYN 274

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD-------QSLIAVILGALDRNTRNKV 255
           TN  +G     DG+KTG+T A+G  ++ + ++           LI +  G+     R   
Sbjct: 275 TNPVLGIVPEVDGLKTGYTNAAGRCVILTGLEKGVDEKSKDMRLIGITTGSNSDFERFVA 334

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI----SEEVCTTQKEIINYNTQMK 311
              L++ GF +       +   +    + L ++  NI     E      K    Y  +++
Sbjct: 335 CKRLITKGFEDYGYNAIGDTEKEVRTIEVLHSQDENIPVYQKEIGYILSKSNDKYRERVE 394

Query: 312 EAKDKESHFIDFEKITLL 329
              D ++       +  +
Sbjct: 395 IKDDLKAPLEAGSSVGKI 412


>gi|91211421|ref|YP_541407.1| D-alanyl-D-alanine endopeptidase [Escherichia coli UTI89]
 gi|110642343|ref|YP_670073.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 536]
 gi|117624337|ref|YP_853250.1| D-alanyl-D-alanine endopeptidase [Escherichia coli APEC O1]
 gi|237704597|ref|ZP_04535078.1| penicillin-binding protein 7 [Escherichia sp. 3_2_53FAA]
 gi|300981491|ref|ZP_07175572.1| beta-lactamase [Escherichia coli MS 200-1]
 gi|331658214|ref|ZP_08359176.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA206]
 gi|91072995|gb|ABE07876.1| penicillin-binding protein 7 precursor
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli UTI89]
 gi|110343935|gb|ABG70172.1| D-alanyl-D-alanine- endopeptidase [Escherichia coli 536]
 gi|115513461|gb|ABJ01536.1| D-alanyl-D-alanine endopeptidase [Escherichia coli APEC O1]
 gi|226900963|gb|EEH87222.1| penicillin-binding protein 7 [Escherichia sp. 3_2_53FAA]
 gi|294492842|gb|ADE91598.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
 gi|300307564|gb|EFJ62084.1| beta-lactamase [Escherichia coli MS 200-1]
 gi|315285794|gb|EFU45234.1| beta-lactamase [Escherichia coli MS 110-3]
 gi|315299372|gb|EFU58624.1| beta-lactamase [Escherichia coli MS 16-3]
 gi|323951931|gb|EGB47805.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H252]
 gi|323955899|gb|EGB51652.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H263]
 gi|331056462|gb|EGI28471.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA206]
          Length = 313

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+   +    +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 26  AVAKTVAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 85

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 86  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 142

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 143 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 201

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 202 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 261

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 262 DAFGKYTHFADASRLRTW 279


>gi|242239829|ref|YP_002988010.1| D-alanyl-D-alanine endopeptidase [Dickeya dadantii Ech703]
 gi|242131886|gb|ACS86188.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Dickeya
           dadantii Ech703]
          Length = 315

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 96/254 (37%), Gaps = 8/254 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           ++  P  +  +        ++D     V+    PD     AS+TKLMTA VV    +   
Sbjct: 29  TSTAPHAAARQEIASGSAMVVDLRNNEVLYSTNPDVVVPIASVTKLMTAMVVLDANQPMD 88

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             ++  I+ +          S  + GS ++  + L L ++ S N  A ++A       + 
Sbjct: 89  ERISVDISQTAE---MKGVYSRVRLGSEISRHDMLLLALMSSENRAAASLAHHYRGGYQA 145

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F+  MN  +K LG++ T ++   G+  H   T      +L    +      +   Q K  
Sbjct: 146 FIAAMNAKAKALGMTHTRYVEPTGLSIHNVSTARDLTKLLIASKQYPLLSQLSTTQEKTA 205

Query: 194 EIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                 Y     NTN  +          KTGFT  +G  +V   +   + +  V+L A  
Sbjct: 206 TFTNPSYSLPFRNTNHLIYRSDWNIQLTKTGFTNQAGHCLVMRTVINQRPVALVVLDAFG 265

Query: 249 RNTRNKVSASLLSM 262
           + T    +  L + 
Sbjct: 266 KFTHFADANRLRNW 279


>gi|312873554|ref|ZP_07733601.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           2052A-d]
 gi|311090807|gb|EFQ49204.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           2052A-d]
          Length = 385

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 115/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 19  ALNAKAAIIYDLKSGQIMYAKNITQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 78

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 79  EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 138

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 139 QLLDWHISQAQIVTPSGLPNFTLGRDADSTKNADAENELSASDMGILIKHLLLEFPQVLD 198

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 199 TTRISKLNFPDGHNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 257

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 258 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNSPI 317

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 318 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 361


>gi|332161016|ref|YP_004297593.1| D-alanyl-D-alanine endopeptidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665246|gb|ADZ41890.1| D-alanyl-D-alanine endopeptidase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 311

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 92/247 (37%), Gaps = 10/247 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T  VI  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 38  APLELASGSAMVVDLQTNKVIYANNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 93

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F+  MN 
Sbjct: 94  VDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFINAMNA 153

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K+LG++ T ++   G+  +   T      +L    +      +     K    +   Y
Sbjct: 154 KAKSLGMTKTRYVEPTGLSINNVSTARDLTKLLIATKQYPLIGQLSTTTEKMATFREPNY 213

Query: 201 ----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V          KTGFT  +G  +    + G++ +  V+L A  + T    
Sbjct: 214 TLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVALVVLDAFGKYTHFAD 273

Query: 256 SASLLSM 262
           +  L S 
Sbjct: 274 ANRLRSW 280


>gi|229547447|ref|ZP_04436172.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis TX1322]
 gi|256854799|ref|ZP_05560163.1| DD-carboxypeptidase [Enterococcus faecalis T8]
 gi|229307479|gb|EEN73466.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis TX1322]
 gi|256710359|gb|EEU25403.1| DD-carboxypeptidase [Enterococcus faecalis T8]
 gi|315028349|gb|EFT40281.1| beta-lactamase [Enterococcus faecalis TX4000]
          Length = 493

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDSAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|46446028|ref|YP_007393.1| putative serine-type D-Ala-D-Ala carboxypeptidase (penicillin
           binding protein) [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399669|emb|CAF23118.1| putative serine-type D-Ala-D-Ala carboxypeptidase (penicillin
           binding protein) [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 456

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 135/362 (37%), Gaps = 35/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR +  I  + ++S       +          LL+  +G ++ E        PAS TK+ 
Sbjct: 33  MRVW-YIFFVTIISFSLRSAPLDFKIAGEAAILLNAESGAILFEQEAYSCQFPASTTKVA 91

Query: 61  TAYVVFSFLKEKKAML---------------TTPITISKNASEYPPSNSTFKKGSTMTLD 105
           TA    S  ++   M+                          E   S+   KKG  M+L 
Sbjct: 92  TALYALSKKQDLNQMMAAEQDSLTTLSQEAKKKTNYDPPYRLEPDGSHIGLKKGEMMSLH 151

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L  +++ S ND A  IA +L  T   F+  +N   K +G   T F N HG+    H T
Sbjct: 152 DLLGGMLIPSGNDAANVIANALGPTIPVFMAELNIYLKKIGCEKTTFYNPHGLHHPQHQT 211

Query: 166 TARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPNTNWAVG----TFLGADGM 216
           TA D+A+++                 Y + K  +        TN  +      +  A G 
Sbjct: 212 TAYDLALITKEALKQPVFCELIGQKKYLRPKTNKQAATTLLQTNRLIRPGSFYYSKAIGG 271

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTG+   +    +  A   +++LI V+LG  +RNT  + +  L    F     + KI   
Sbjct: 272 KTGYHAKAKKTYIGVARSEERTLIVVLLGYQERNTIFQDAIKLFDAAFN----QPKIQRT 327

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE------SHFIDFEKITLLK 330
                +Q+ ++ +P  +  + T  KE +  +  + E  + +         +  +K   + 
Sbjct: 328 FLKEGRQSFAHNLPKAACPLQTHLKEPLKLDYYLAEDPEAKCLLYWMIPPLPIQKDQQVG 387

Query: 331 NK 332
             
Sbjct: 388 EL 389


>gi|328884566|emb|CCA57805.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           venezuelae ATCC 10712]
          Length = 426

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 100/298 (33%), Gaps = 27/298 (9%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF----SFLKEKKA 74
              + +      + + D  +G ++A +    P  PAS  K++ A  +        ++   
Sbjct: 64  APVLPKELSGRSWIVADAESGEILAAHNAHWPLAPASTLKMLFADTLLPKFPDATQKHLV 123

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
             T    I + +S              + L   L+          AV +  S+    ++ 
Sbjct: 124 TTTDLAGIGEGSSLVGIKEKQTYTVHDLWLGVFLRSGND------AVHVLTSMNNGLRQT 177

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------M 185
           V+ MN+ +  L    TH ++  G    G  ++A D+ +++                    
Sbjct: 178 VKDMNDHAAELQALDTHVVSPDGYDAPGQVSSAYDLTLIARNGMQKKDFREYAATPRAAF 237

Query: 186 HYFQIKGLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
              Q  G + +  +  NTN        V  + G  G+K G T  +G      A +  + L
Sbjct: 238 PGEQKPGKKRETFEIQNTNRLLTGDLGVAPYQGIAGVKNGNTTHAGATFTGVAERNGRVL 297

Query: 240 IAVILGALDRNTR--NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           +  ++    +      + +A LL  GF        +  +++    +  S    + +  
Sbjct: 298 LVTVMNPSSKEQHAVYREAARLLDWGFAAAGKVTPVGELVRPRSARTESTAPGDGTAP 355


>gi|307327153|ref|ZP_07606342.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
 gi|306887234|gb|EFN18231.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
          Length = 311

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 25/273 (9%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                          LLDT +   +     +     AS TK+MTA VV      +   L 
Sbjct: 34  ASAEPPPEVSAQGAYLLDTGSNKELMAKDANTKRPMASTTKIMTALVVLE---TRGLDLN 90

Query: 78  TPITISKNASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------ 127
             +T+ +   +Y      S +  + G  +T++  L  L++ S  D A+A+A++       
Sbjct: 91  QQVTVKQEYRDYVTKAGASTADLQTGDKLTVNQLLYALMLPSGCDAAMALADTFGTGDTT 150

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-VQHGHYTTARDMAILSWRIKTDFPQYMH 186
            +  K F+  MN  +K+LGL+ T++ +  GV     +Y+T RD+A L+ R   +      
Sbjct: 151 AERTKSFISKMNAKAKDLGLANTNYDSFDGVSADSDNYSTPRDVAQLTRRAMDNATFDTV 210

Query: 187 YFQI--------KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
              +             +   + NTN  +G++ GA G+KTG T  +G  +V +A +GD+ 
Sbjct: 211 VKSVSTKQEAPAANGHTRYYSWDNTNQLLGSYQGAIGVKTGTTTPAGPCLVFAAKRGDKE 270

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
           ++ V+L       R   +  +L   +   T+ K
Sbjct: 271 VVGVVLN---DADRYPDAKKMLDWTYDTTTEVK 300


>gi|323968053|gb|EGB63463.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli M863]
          Length = 313

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAVATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++    L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKEML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|304439141|ref|ZP_07399059.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372273|gb|EFM25861.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 437

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 72/321 (22%), Positives = 139/321 (43%), Gaps = 13/321 (4%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              + + D  TG ++  N  D     AS +KL++ YVV   +K  K  L   +TI   A 
Sbjct: 75  AKTFLIGDYATGEILEFNDIDEVVAMASTSKLVSVYVVLDQIKAGKLKLDDMVTIPHEAE 134

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
             P S+   K+G T T+   L   +V S ND   ++A  +  + + FV  MN   K+LGL
Sbjct: 135 VLPGSSYKIKEGDTKTVKELLTAALVISGNDAITSLAIKVAGSTQAFVDMMNKKCKDLGL 194

Query: 148 SATHFMNAHGVVQH----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE--IKGKKYP 201
           +  H +N  G+  +     +  T R+M +L+  I  + P+ + Y ++  +    +     
Sbjct: 195 TNAHMINPTGLTDYSIEDYNKMTTREMFLLARYIMKEHPEILEYTKMPSIVEADREFTAY 254

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD-------QSLIAVILGALDRNTRNK 254
           +TN  +G      G+KTG+T A+G  ++A+ ++           LI +  G+    +R  
Sbjct: 255 STNPILGVIPEIQGLKTGYTGAAGRCLIATELKPGDGKTTKDLRLITITTGSKSDWSRYV 314

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           VS  + ++      +R   N        +  +++ PN +    +    +++  ++++   
Sbjct: 315 VSKRVANIALTKYENRILGNTTSPVTTIEAENSQEPNYNVYQESEIASLVHPESKVESEI 374

Query: 315 DKESHFIDFEKITLLKNKITK 335
                     K T++ +   K
Sbjct: 375 HLNEIAAPLPKDTVVGSITYK 395


>gi|299066620|emb|CBJ37810.1| D-Alanyl-D-alanine carboxypeptidase [Ralstonia solanacearum CMR15]
          Length = 392

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 6/247 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +     ++D  +G V+ +         AS+TKLMTA VV    +    +L  
Sbjct: 110 ATPDALALRSSVALVMDQGSGDVLFQKNASAVLPIASITKLMTALVVTDTHQPMDELLEI 169

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +      + S  + G+ +T ++ L L ++ S N  A A+  S       FV  M
Sbjct: 170 TE---DDRDFERNTGSRLRYGTMLTREDLLLLALMSSENRAASALGRSYPGGRPAFVAAM 226

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +  LG++ TH+++++G+      +      I+    K    +         +   G+
Sbjct: 227 NRKAHELGMTDTHYVDSNGLSSSNVSSAMDLAKIVMAAYKVPLIRQFTTTAEHTVNANGR 286

Query: 199 KYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V       G  KTGF   +G  +V  A    ++++ V L +    TR   
Sbjct: 287 TLHYVNTNRLVRGGEWDIGLQKTGFINEAGRCLVMQANVHGRNVVMVFLDSAGNLTRFAD 346

Query: 256 SASLLSM 262
           +  + + 
Sbjct: 347 AVRVRNW 353


>gi|324013985|gb|EGB83204.1| beta-lactamase [Escherichia coli MS 60-1]
          Length = 309

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+   +    +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 26  AVAKTVAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 85

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 86  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 142

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 143 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 201

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 202 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 261

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 262 DAFGKYTHFADASRLRTW 279


>gi|291616796|ref|YP_003519538.1| PbpG [Pantoea ananatis LMG 20103]
 gi|291151826|gb|ADD76410.1| PbpG [Pantoea ananatis LMG 20103]
          Length = 315

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 107/279 (38%), Gaps = 20/279 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           +R  L+ +A+ +   +    + A                     ++D  +G  +  ++PD
Sbjct: 5   IRFSLLTLALLVSGQVVSLPAQATTTLSQMAPIAQPQIASGSALIVDLTSGKTLFSSHPD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV    +    M+T  I+ +          S  K  S ++  + L
Sbjct: 65  RVRPIASITKLMTAMVVLDAHQPMNEMVTVDISQTPE---MRGVFSRVKLNSQISRRSML 121

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A +       F++ MN  ++ LG++ TH++   G+      +   
Sbjct: 122 MLALMSSENRAAASLAHAYPGGYNAFIKAMNAKARALGMNHTHYVEPTGLSIQNVSSAED 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
            + +L    +      +   + +        Y     NTN  V          KTG+T  
Sbjct: 182 LVKLLKATREYPLLSELSTTKEETAVFTHPSYALPFRNTNHLVYKNGWHIQLTKTGYTDE 241

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V   +  ++ +  V+L A  + T    +  L   
Sbjct: 242 AGHCLVMRTMIKNRPVALVVLDAFGKYTHFADANRLRDW 280


>gi|254830752|ref|ZP_05235407.1| hypothetical protein Lmon1_05309 [Listeria monocytogenes 10403S]
          Length = 272

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGKPLYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDEKLNLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K  
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNNQAKKS 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|226941642|ref|YP_002796716.1| PbpG [Laribacter hongkongensis HLHK9]
 gi|226716569|gb|ACO75707.1| PbpG [Laribacter hongkongensis HLHK9]
          Length = 286

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 104/267 (38%), Gaps = 14/267 (5%)

Query: 6   VIIAMAMLSNIFP------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +++A + L    P        S           +++  TG V+     D   + AS+TKL
Sbjct: 13  MLLATSPLVLALPEHEMQLAASSVPRLHSSAALVVNAQTGEVLFGKNTDRMMSIASITKL 72

Query: 60  MTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           MTA V+    +     L   ITIS+        ++S    GS ++    L L ++ S N 
Sbjct: 73  MTAMVMLDSGQP----LDELITISEAEIDRLKNTSSRLAVGSVLSRREMLLLALMSSENR 128

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT--TARDMAILSWR 176
            A ++A +       FV  MN  ++ LG+ +T F +  G+      T      M   ++R
Sbjct: 129 AAASLARTSPGGTSAFVSRMNQKARQLGMHSTRFYDPTGLDSRNTSTAEDLARMVAAAYR 188

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQG 235
                       Q      +  +Y N+N  V       G  KTG+T  +G  +V  A  G
Sbjct: 189 YPLIREDTTTTDQQVYARNRMLQYRNSNALVREGQWQIGLSKTGYTQEAGRCLVMMATVG 248

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSM 262
              LI V L +   + R   + ++ + 
Sbjct: 249 STPLIMVFLDSEGSSARINDARNIKTW 275


>gi|256545481|ref|ZP_05472843.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus vaginalis ATCC
           51170]
 gi|256398877|gb|EEU12492.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus vaginalis ATCC
           51170]
          Length = 407

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 67/363 (18%), Positives = 131/363 (36%), Gaps = 30/363 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYPD 48
           R+ ++   +A L    P  + A+                   Y + +  +G +  +   D
Sbjct: 3   RKKIIAFLLAFLFIFSPIKTFADDTVAKEGDNIVGADKFVKAYLIGNQESGDIFYQKNAD 62

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK---KGSTMTLD 105
             +  AS++KLMT  +    ++  K    T +  +K A +      +     +G   T+ 
Sbjct: 63  QTYPIASMSKLMTFLLARDAIESGKISFDTKVKGTKEAEDLTGPEYSAMGIKEGEQYTIK 122

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV---VQHG 162
             L  L+V S ND A  +A ++  +E  F   MN  ++ L L +  + NA G+       
Sbjct: 123 ELLTGLMVVSGNDCANLLASTISGSEANFANEMNKKAQELNLKSQKYYNASGINTEDDKQ 182

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGF 220
           + ++A+D+  L+  I   +P  + Y +I G++   K     +         G DG+KTG 
Sbjct: 183 NSSSAKDLFELTRIIVDKYPDILEYSKINGIDDDKKDIHKKSTIPLRDEIKGVDGLKTGT 242

Query: 221 TCASGFNIVASA------IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           T  +G  +  +        + +   I +++GA +   RN     L+         +K  +
Sbjct: 243 TEEAGHCLTTTIDMNKFDPKNEFRAIGIVMGAEENEFRNSAMTDLIYYVSRYFNYKKLTD 302

Query: 275 Y--IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                      ++      +  E              +K   +K       +K   L   
Sbjct: 303 KDLPSDSIKVNSVKEGYVELYPEKTVGFIIKDKAMPSVKIKINK-DIKAPIKKNEKLGKA 361

Query: 333 ITK 335
             K
Sbjct: 362 YIK 364


>gi|229084363|ref|ZP_04216643.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
 gi|228698903|gb|EEL51608.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
          Length = 416

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 131/323 (40%), Gaps = 13/323 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                   +   +D  TG V+ +   +    PAS+TK++TA ++   +K  +       +
Sbjct: 32  QGPNVFGQFAVSIDAKTGDVLYDKNANQHAFPASMTKVLTAILLMEHVKPGE---QFTFS 88

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                 E       F+ G T+  + AL +L+V SAND++ A+ E +  + + F + MN  
Sbjct: 89  QPALDQEKSNYQIEFQVGETIDRNTALTILMVLSANDVSYAVGERIGGSIENFAKMMNEK 148

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +K LG   +HF+  +G+    HYTTA DMA+++      +P+ +     K   +   +  
Sbjct: 149 AKQLGAKDSHFITPNGLHDPNHYTTAYDMAMITR-GVQKYPEILQAMNTKRTTVTTSRQT 207

Query: 202 NTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
            + +    +     + G KTGFT  +   +V    +    +I V++ A  R    +    
Sbjct: 208 VSIFNKANYFENPYSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRPEIYEDMRQ 266

Query: 259 LLSMGFYNKTDRKKINYI---IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK- 314
           +    F   T +  ++      K  Y     +     S E+   + E  N  T  + A  
Sbjct: 267 IADHSFSQFTKQMVLDKNNWHQKASYLDKNIDCELEKSAELMLKKDEGKNVKTVFRAAAV 326

Query: 315 DKES-HFIDFEKITLLKNKITKK 336
           +KE  +     +  ++      K
Sbjct: 327 NKEQLYQKGIHRGDVIGTVDVTK 349


>gi|307288894|ref|ZP_07568867.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           TX0109]
 gi|306500166|gb|EFM69510.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           TX0109]
 gi|315164420|gb|EFU08437.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           TX1302]
          Length = 493

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKEDGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGDQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|315031813|gb|EFT43745.1| putative beta-lactamase [Enterococcus faecalis TX0017]
          Length = 493

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--ILLNSTVQAPKVAYQEVK 400


>gi|170686750|ref|ZP_02877970.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|254682564|ref|ZP_05146425.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|170669273|gb|EDT20016.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
          Length = 428

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 15/301 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 37  VAPPPKEGPNVFSQFATTIDVKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 91

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 92  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+    HYTT  DMA+++      +P+ +     K  
Sbjct: 152 FANMMNERAKQLGATDSHFVTPNGLHDPNHYTTPYDMAMITR-GVQKYPEILQAMNTKRT 210

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 211 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 269

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E+ N  
Sbjct: 270 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEVKNVK 329

Query: 308 T 308
           T
Sbjct: 330 T 330


>gi|115352221|ref|YP_774060.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria AMMD]
 gi|172061088|ref|YP_001808740.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MC40-6]
 gi|115282209|gb|ABI87726.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia ambifaria AMMD]
 gi|171993605|gb|ACB64524.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MC40-6]
          Length = 384

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV              
Sbjct: 122 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDAKSPMT---DQL 178

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 179 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 238

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K+LG++ THF N+ G+    + ++ARD+  +           Q+           K 
Sbjct: 239 AKAKSLGMNDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYDVYTGKR 297

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 298 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 357

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 358 DASRLRNW 365


>gi|323940796|gb|EGB36984.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E482]
          Length = 337

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|182416870|ref|ZP_02948256.1| D-alanyl-D-alanine carboxypeptidase [Clostridium butyricum 5521]
 gi|237667877|ref|ZP_04527861.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182379332|gb|EDT76831.1| D-alanyl-D-alanine carboxypeptidase [Clostridium butyricum 5521]
 gi|237656225|gb|EEP53781.1| putative D-alanyl-D-alanine carboxypeptidase DacB [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 300

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 34/286 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-----------------------NKLPYYTLLDTN 37
           M++ + I ++ +L ++F  +   +                                LD  
Sbjct: 1   MKKGIKISSILLLCSLFVQILSVDAYGYINYGNISYSYNEKSENKNLRVNARCAIALDKE 60

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           +  V+ E         AS TK++T+ +           L  P+TISK AS    S   +K
Sbjct: 61  SHQVLYEQNAYEIVPMASTTKILTSLIAIEQDD-----LNAPVTISKKASSIRGSKVGYK 115

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           +   +TL   +  L+ KS ND A+AIAE +  + + F + MN+ ++ +G+  +HF + HG
Sbjct: 116 ENEVITLKELIFGLMFKSGNDAAIAIAEHIGGSVEGFAEIMNHYARGIGILDSHFESPHG 175

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK---KYPNTNWAVGTFLGAD 214
           +    HY++A D+A+L+ +                 + K      Y N N  +    GA+
Sbjct: 176 LDSSQHYSSAYDLALLTCKGMDYDLFREVVGSKSISKDKYNFTRDYNNINKILWKIPGAN 235

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           G+KTG+T  +G  +V+S    ++ +I V+L   D   R  V+  + 
Sbjct: 236 GVKTGYTGQAGKCLVSSVNNNNKDIIIVVLNCPD---RWNVTDKIY 278


>gi|29377583|ref|NP_816737.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis V583]
 gi|227554548|ref|ZP_03984595.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis HH22]
 gi|229548016|ref|ZP_04436741.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis ATCC
           29200]
 gi|312905434|ref|ZP_07764548.1| putative beta-lactamase [Enterococcus faecalis TX0635]
 gi|312953223|ref|ZP_07772069.1| putative beta-lactamase [Enterococcus faecalis TX0102]
 gi|12188896|emb|CAC21495.1| DD-carboxypeptidase [Enterococcus faecalis]
 gi|29345050|gb|AAO82807.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis V583]
 gi|227176346|gb|EEI57318.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis HH22]
 gi|229306892|gb|EEN72888.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis ATCC
           29200]
 gi|310628840|gb|EFQ12123.1| putative beta-lactamase [Enterococcus faecalis TX0102]
 gi|310631163|gb|EFQ14446.1| putative beta-lactamase [Enterococcus faecalis TX0635]
 gi|315152792|gb|EFT96808.1| putative beta-lactamase [Enterococcus faecalis TX0031]
 gi|315159373|gb|EFU03390.1| putative beta-lactamase [Enterococcus faecalis TX0312]
 gi|315161196|gb|EFU05213.1| putative beta-lactamase [Enterococcus faecalis TX0645]
 gi|315573276|gb|EFU85467.1| putative beta-lactamase [Enterococcus faecalis TX0309B]
 gi|315577112|gb|EFU89303.1| putative beta-lactamase [Enterococcus faecalis TX0630]
 gi|315581150|gb|EFU93341.1| putative beta-lactamase [Enterococcus faecalis TX0309A]
 gi|323479056|gb|ADX78495.1| D-alanyl-D-alanine carboxypeptidase family protein [Enterococcus
           faecalis 62]
          Length = 493

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|327393222|dbj|BAK10644.1| penicillin-binding protein 7 precursor PbpG [Pantoea ananatis
           AJ13355]
          Length = 315

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 106/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           +R  L+ +A+ +   +    + A                     ++D  +G  +  ++PD
Sbjct: 5   IRFSLLTLALLVSGQVVSLPAQATTTLSQMAPIAQPQIASGSALIVDLTSGKTLFSSHPD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV    +    M+T  I+ +          S  K  S ++  + L
Sbjct: 65  RVRPIASITKLMTAMVVLDAHQPMNEMVTVDISQTPE---MRGVFSRVKLNSQISRRSML 121

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A +       F++ MN  ++ LG++ TH++   G+    + ++A 
Sbjct: 122 MLALMSSENRAAASLAHAYPGGYNAFIKAMNAKARALGMNHTHYVEPTGL-SIQNVSSAE 180

Query: 169 DMAILSWRIKTDF---PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG---MKTGFTC 222
           D+  L    +             +           P  N     +         KTG+T 
Sbjct: 181 DLVKLLKATREYPLLGELSTTKEETAVFTHPSYALPFRNTNHLVYKNGWHIQLTKTGYTD 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            +G  +V   +  ++ +  V+L A  + T    +  L   
Sbjct: 241 EAGHCLVMRTMIKNRPVALVVLDAFGKYTHFADANRLRDW 280


>gi|107028687|ref|YP_625782.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia AU 1054]
 gi|116690154|ref|YP_835777.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia HI2424]
 gi|170733486|ref|YP_001765433.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia MC0-3]
 gi|105897851|gb|ABF80809.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia cenocepacia AU 1054]
 gi|116648243|gb|ABK08884.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia cenocepacia HI2424]
 gi|169816728|gb|ACA91311.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia MC0-3]
          Length = 388

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS++KLMTA VV              
Sbjct: 126 TPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASISKLMTAMVVLDAKSPMT---DQL 182

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 183 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 242

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  +           Q+      +    K 
Sbjct: 243 AKAKALGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKR 301

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 302 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 361

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 362 DASRLRNW 369


>gi|291562538|emb|CBL41354.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SS3/4]
          Length = 528

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 114/359 (31%), Gaps = 32/359 (8%)

Query: 2   RQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++   ++   ++            P        +     ++D +TG ++        + P
Sbjct: 7   KKLAKVLCGVLVFTQLGTMQAFARPDWPSDTGIEAEAGAVMDVDTGTMLFGQNSHVEYYP 66

Query: 54  ASLTKLMTAYVVFSFLK-EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           AS+TK++TA VV            +     S        +  +   G TMT+++ L  L+
Sbjct: 67  ASITKILTALVVLEHADLTDTVTYSDKAMNSVEVD--SGNKLSLVAGDTMTVEDCLYALL 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S N  A A+AE +  +   FV  MN     LG + +HF N  G+       TA DM  
Sbjct: 125 LASVNQAANALAEHVAGSIPDFVDMMNAKISELGCTESHFANPSGLNNDDQVVTAFDMTK 184

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKK-------YPNTNW--------AVGTFLGADGMK 217
           ++    ++ P+ +     K  ++             N +         +      A   K
Sbjct: 185 IAAAAYSN-PKLLEISSAKSWKVGPTTNNPDGASVRNEHRLVITEDTSSEYYCPEAVAGK 243

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG+   +G  +V    +  + +++VIL             SLL  G     +        
Sbjct: 244 TGYLLKAGNTLVTYGEKDGRRVVSVILKG-SPRQYFIDGKSLLQFGLNRFQNVDIAENET 302

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE----AKDKESHFIDFEKITLLKNK 332
           +    ++  +             +               A+       D      +   
Sbjct: 303 RYVTGEDQVDVNGTSYAPSDLAIQTGKKITLPKDATFADAELSLGAVPDGAPEGTVGVL 361


>gi|171320025|ref|ZP_02909096.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MEX-5]
 gi|171094718|gb|EDT39761.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MEX-5]
          Length = 370

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 97/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV              
Sbjct: 108 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDSKSPMT---DQL 164

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 165 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 224

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  +           Q+           K 
Sbjct: 225 AKAKTLGMNDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYDVYTGKR 283

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 284 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 343

Query: 255 VSASLLSM 262
            +A L + 
Sbjct: 344 DAARLRNW 351


>gi|329941806|ref|ZP_08291071.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
 gi|329299523|gb|EGG43423.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
          Length = 398

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 95/258 (36%), Gaps = 14/258 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P            + + D ++G V+A +    P  PAS  K + A  V   L        
Sbjct: 65  PGAPAVPEVSALSWLVADADSGDVLAAHDAHRPLPPASTLKALFALTVLPALPADARHTV 124

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
                ++     P S+              L   +  S+ + AV +  ++    +   + 
Sbjct: 125 DE---TELRGIGPGSSLVGVAEGLTYTVADLWRGVFLSSGNDAVHVLAAMNGGLEATTRR 181

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           M + ++ LG   TH ++  G  + G  ++A D+A+       D     +    +      
Sbjct: 182 MRDKARALGARDTHVLSPDGYDRPGQVSSAYDLAVFGRAGLHDPDFARYCATPEAYFPGY 241

Query: 198 ---KKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--A 246
                  NTN        V  + G  G+K G+T  +G  ++A+A +G ++L+  +L   +
Sbjct: 242 GQPYGIQNTNRLLTGADGVAPYPGLIGVKNGYTSGAGNTLIAAARRGGRTLVVTVLHPRS 301

Query: 247 LDRNTRNKVSASLLSMGF 264
                  + + +LL  GF
Sbjct: 302 GGGLQVYEEARALLDWGF 319


>gi|170703460|ref|ZP_02894228.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria IOP40-10]
 gi|170131628|gb|EDT00188.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria IOP40-10]
          Length = 370

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV              
Sbjct: 108 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDAKSPMT---DQL 164

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 165 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 224

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K+LG++ THF N+ G+    + ++ARD+  +           Q+           K 
Sbjct: 225 AKAKSLGMNDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYDVYTGKR 283

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 284 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 343

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 344 DASRLRNW 351


>gi|293385132|ref|ZP_06630958.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           R712]
 gi|293389105|ref|ZP_06633577.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           S613]
 gi|312906684|ref|ZP_07765684.1| putative beta-lactamase [Enterococcus faecalis DAPTO 512]
 gi|312910854|ref|ZP_07769690.1| putative beta-lactamase [Enterococcus faecalis DAPTO 516]
 gi|291077609|gb|EFE14973.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           R712]
 gi|291081573|gb|EFE18536.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           S613]
 gi|310627332|gb|EFQ10615.1| putative beta-lactamase [Enterococcus faecalis DAPTO 512]
 gi|311288877|gb|EFQ67433.1| putative beta-lactamase [Enterococcus faecalis DAPTO 516]
          Length = 493

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|300861515|ref|ZP_07107599.1| putative beta-lactamase [Enterococcus faecalis TUSoD Ef11]
 gi|312902122|ref|ZP_07761382.1| putative beta-lactamase [Enterococcus faecalis TX0470]
 gi|300848976|gb|EFK76729.1| putative beta-lactamase [Enterococcus faecalis TUSoD Ef11]
 gi|311290786|gb|EFQ69342.1| putative beta-lactamase [Enterococcus faecalis TX0470]
 gi|315026425|gb|EFT38357.1| putative beta-lactamase [Enterococcus faecalis TX2137]
 gi|315144141|gb|EFT88157.1| putative beta-lactamase [Enterococcus faecalis TX2141]
 gi|315167228|gb|EFU11245.1| putative beta-lactamase [Enterococcus faecalis TX1341]
          Length = 493

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|295102108|emb|CBK99653.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           L2-6]
          Length = 441

 Score =  126 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/317 (20%), Positives = 113/317 (35%), Gaps = 18/317 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M++++  +  A+L                    Y ++D +TG V+A+   +   +PAS+T
Sbjct: 1   MKKYIAALLTALLLLCTALSAGAVGPALTTTEAYCIMDADTGLVLAQQNMNEELHPASIT 60

Query: 58  KLMTAYVVFSFLK--EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           K+MT  +     +       LT       + +    S+   ++G  + L +AL   ++ S
Sbjct: 61  KVMTLGLACQKAQGNWDGVKLTVSHEDVYSLAGTDSSHIALREGEEVPLQDALYGTMIAS 120

Query: 116 ANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           AND A  +AE     T +  V  MN     LGL  THF N HG+    HYT+  DMA + 
Sbjct: 121 ANDGANLLAEYFGGGTIEGGVAAMNAQVAALGLEHTHFANPHGISGDDHYTSCYDMAQIL 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV------------GTFLGADGMKTGFTC 222
               T       + +++   +                               G K G+T 
Sbjct: 181 RWALTQPGFETIFTRLEMYTMAPTNVQPVTRYFSQQDKMRLSYSRYYIPAIRGSKIGYTN 240

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            + ++ V  A Q    LI V + +  +  +     +LL   F   T    +         
Sbjct: 241 IARYSYVCLAEQNGVRLICVTMQSEMKTDKYNDVRTLLDYAFARYTGYTDLPSQGLTGEV 300

Query: 283 QNLSNEVPNISEEVCTT 299
           + +          V   
Sbjct: 301 EVVGGGGTLGKVTVTDP 317


>gi|262373941|ref|ZP_06067218.1| D-alanyl-D-alanine endopeptidase [Acinetobacter junii SH205]
 gi|262310952|gb|EEY92039.1| D-alanyl-D-alanine endopeptidase [Acinetobacter junii SH205]
          Length = 353

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           S   +       ++D  TG V+           AS+TK+MTA V      +    + T  
Sbjct: 102 SNQPSVNARAALVMDAQTGEVLYSKNSSLAVPIASITKVMTAVVTADARLDMSEEI-TLQ 160

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G TM     L   ++KS N  A A+A +       FV  MN 
Sbjct: 161 QIDFAGAGGKNSSSTLRAGDTMNRAELLLFALMKSENPAAAALARTYPGGRSAFVAAMNA 220

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG+++T +  + G+    + ++ARD+ IL     + +     +      +      
Sbjct: 221 KARQLGMTSTRYAESTGL-DPHNVSSARDLGILVS-AASQYGLIRQFSTTPTYDFNLGYR 278

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LGA     R   
Sbjct: 279 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGASTSQARTND 338

Query: 256 SASLLSM 262
           + +LL+ 
Sbjct: 339 ATNLLNW 345


>gi|315150905|gb|EFT94921.1| putative beta-lactamase [Enterococcus faecalis TX0012]
          Length = 493

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITVIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|47095619|ref|ZP_00233227.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899730|ref|ZP_05259654.1| hypothetical protein LmonJ_07951 [Listeria monocytogenes J0161]
 gi|254913067|ref|ZP_05263079.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937448|ref|ZP_05269145.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|47016049|gb|EAL06974.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258610050|gb|EEW22658.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293591068|gb|EFF99402.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 272

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEALYEKKTDKVMPIASLTKLMTAFLVLEAVDNNELSWDERLNLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|332361675|gb|EGJ39479.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1056]
          Length = 455

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 148/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +A L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIAFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|327536245|gb|AEA95079.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           OG1RF]
          Length = 493

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 73/388 (18%), Positives = 143/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F + A                              ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQATVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|289824265|ref|ZP_06543860.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 462

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 12/246 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS+TKLMTA VV       +  L   + + 
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDA----RLPLDEILKVD 78

Query: 84  -KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                E     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +
Sbjct: 79  ISQTPEMKGVYSRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKA 138

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKG 197
           K LG++ T F+   G+    + +TARD+  L      + +                    
Sbjct: 139 KALGMTHTRFVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREDMATFSHPAYT 197

Query: 198 KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    +
Sbjct: 198 LPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADA 257

Query: 257 ASLLSM 262
           + L + 
Sbjct: 258 SRLRTW 263


>gi|312967428|ref|ZP_07781643.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 2362-75]
 gi|312287625|gb|EFR15530.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 2362-75]
          Length = 310

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 23  AVAKMAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 82

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 83  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 139

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 140 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 198

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 199 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 258

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 259 DAFGKYTHFADASRLRTW 276


>gi|332097490|gb|EGJ02470.1| D-alanyl-D-alanine endopeptidase [Shigella boydii 3594-74]
          Length = 292

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D NT  VI  N+PD     AS++KLMTA VV     
Sbjct: 5   AVAKTAAAITASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARL 64

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 65  PLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 121

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
            K F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 122 YKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTR 180

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 181 EDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 240

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 241 DAFGKYTHFADASRLRTW 258


>gi|309805391|ref|ZP_07699440.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 09V1-c]
 gi|308165318|gb|EFO67552.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 09V1-c]
          Length = 425

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 115/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNITQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSTKNADAENELSASDMGILIKHLLLEFPQVLD 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRISKLNFPDGHNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 298 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNSPI 357

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|182437561|ref|YP_001825280.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178466077|dbj|BAG20597.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 311

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 15/271 (5%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A  S                  +++  TG  +     D   +  S TK+MTA VV S   
Sbjct: 41  AFASTAHAATPPTPKIVAKGGFVMNDGTGKTLFTKSADTRRSTGSTTKIMTALVVLSQKN 100

Query: 71  EKKAMLTTPIT-ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                  T     S    +   S++    G   T+   L  L++ S  D A A+A+    
Sbjct: 101 VNLKSKVTVQKAYSDYIVKKNASSARLIVGDKPTVGQLLYGLMLPSGCDAAYALADKFGS 160

Query: 130 TEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD--------MAILSW 175
            + +  +       MN T+K+L L  THF +  G+    +Y+T RD        M   ++
Sbjct: 161 GKTRAARVKSFIGKMNATAKSLKLKNTHFDSFDGIGGGNNYSTPRDLTKIASKAMKNATF 220

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           R              K    +   + NTN  + ++ G  G+KTG    + + +V +A + 
Sbjct: 221 RSIVKTKSTKQKVTTKSGGYRYMSWNNTNKMLSSYSGDIGVKTGSGPTAKYCLVFAATRK 280

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +++I  +L +     R   +  L+  GF  
Sbjct: 281 GKTVIGTVLTSSSEANRTADAKKLMDYGFKK 311


>gi|221632467|ref|YP_002521688.1| penicillin-binding protein dacF [Thermomicrobium roseum DSM 5159]
 gi|221157156|gb|ACM06283.1| penicillin-binding protein dacF precursor [Thermomicrobium roseum
           DSM 5159]
          Length = 503

 Score =  125 bits (314), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 72/237 (30%), Positives = 110/237 (46%), Gaps = 16/237 (6%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           +G V+    PD P  PASLTKL TA                 +   +       S+   +
Sbjct: 22  SGRVLYAKEPDAPRAPASLTKLATALTAVE------LAPRDTVLTVQAQDLVGESSMGLR 75

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--------KKFVQHMNNTSKNLGLSA 149
            G  +TL+ AL  L++ S ND A+ IA +L             +FV+ MN  ++ LGL  
Sbjct: 76  PGEQITLEAALYGLLLASGNDAAMTIARNLSGLPGDTPEAAVNRFVKQMNLLAQRLGLER 135

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T F N HG+ Q GH TTARD+A+L+  +    P+     Q    +        TN  +G 
Sbjct: 136 TTFRNPHGLDQEGHVTTARDLALLTRAVL-QRPELRRILQTPSYDDGVHAVQTTNRLLGR 194

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           + G  G KTG T A+G++++ +A +   ++I V+LG+  R+     +  LL   F  
Sbjct: 195 YPGLIGGKTGITEAAGYSLIEAAERDGTTVIVVVLGS-TRDAWYADAVQLLDYAFAQ 250


>gi|125554420|gb|EAZ00026.1| hypothetical protein OsI_22026 [Oryza sativa Indica Group]
          Length = 307

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 12/256 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +      +           ++D NT  VI  ++PD     AS+TKLMTA VV        
Sbjct: 27  TPAVTTAAAQPQIASGSAMIVDLNTNKVIYASHPDLVRPIASITKLMTAMVVLDA----H 82

Query: 74  AMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             L   + +   +  E     S  +  S ++  N L L ++ S N  A ++A        
Sbjct: 83  LPLDEKLKVDISHTPEMKGIYSRVRLNSEISRKNMLLLALMSSENRAAASLAHHYPGGYD 142

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHY 187
            F++ MN  +K LG++ TH++   G+    + +TARD+  L      + +          
Sbjct: 143 AFIRAMNAKAKALGMNNTHYVEPTGL-SINNVSTARDLTKLLIASKQYPLIGQLSTTREE 201

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                       + NTN  V          KTGFT A+G  +V   +   + +  V++ A
Sbjct: 202 MATFANPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVFNGKPVALVVMDA 261

Query: 247 LDRNTRNKVSASLLSM 262
             + T    ++ L + 
Sbjct: 262 FGKYTHFADASRLRTW 277


>gi|291447193|ref|ZP_06586583.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
 gi|291350140|gb|EFE77044.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
          Length = 449

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 97/278 (34%), Gaps = 20/278 (7%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             + +      + + D   G V+A +       PAS  K++ A  V   L+      T  
Sbjct: 63  PVLPKGLTARSWIVADAENGDVLAAHNSHWRLPPASTMKMLFADTVLPALQP---TQTHK 119

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T S+ A     S+    K       + L L +   + + AV +  S+     + V  M 
Sbjct: 120 VTESELAGVGEGSSLVGIKEDHTYTVHDLWLGVFLRSGNDAVHVLASMYGGMPQTVAAMQ 179

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQI 190
             ++ L    T  ++  G       ++A D+ +++                       + 
Sbjct: 180 KHAEELQALDTVVVSPDGYDAPRQVSSAYDLTLIARSGMQKKDFREYAATASADFPGEKK 239

Query: 191 KGLEIKGKKYPNTNWAV------GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           KG +    +  NTN  +        + G  G+K G+T  +G      A +  + L+  ++
Sbjct: 240 KGKKRDSFEIQNTNRLITGDIGVDPYKGIAGVKNGYTTHAGNTFTGVAERNGKVLLVTVM 299

Query: 245 G--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
              A + +   K +A LL  GF        +  ++   
Sbjct: 300 NPSAEESHAVYKEAAKLLDWGFAASGKVTPVGELVPPK 337


>gi|239990182|ref|ZP_04710846.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
          Length = 452

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 97/278 (34%), Gaps = 20/278 (7%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             + +      + + D   G V+A +       PAS  K++ A  V   L+      T  
Sbjct: 66  PVLPKGLTARSWIVADAENGDVLAAHNSHWRLPPASTMKMLFADTVLPALQP---TQTHK 122

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T S+ A     S+    K       + L L +   + + AV +  S+     + V  M 
Sbjct: 123 VTESELAGVGEGSSLVGIKEDHTYTVHDLWLGVFLRSGNDAVHVLASMYGGMPQTVAAMQ 182

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQI 190
             ++ L    T  ++  G       ++A D+ +++                       + 
Sbjct: 183 KHAEELQALDTVVVSPDGYDAPRQVSSAYDLTLIARSGMQKKDFREYAATASADFPGEKK 242

Query: 191 KGLEIKGKKYPNTNWAV------GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           KG +    +  NTN  +        + G  G+K G+T  +G      A +  + L+  ++
Sbjct: 243 KGKKRDSFEIQNTNRLITGDIGVDPYKGIAGVKNGYTTHAGNTFTGVAERNGKVLLVTVM 302

Query: 245 G--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
              A + +   K +A LL  GF        +  ++   
Sbjct: 303 NPSAEESHAVYKEAAKLLDWGFAASGKVTPVGELVPPK 340


>gi|239943733|ref|ZP_04695670.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
          Length = 436

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 97/278 (34%), Gaps = 20/278 (7%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             + +      + + D   G V+A +       PAS  K++ A  V   L+      T  
Sbjct: 50  PVLPKGLTARSWIVADAENGDVLAAHNSHWRLPPASTMKMLFADTVLPALQP---TQTHK 106

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +T S+ A     S+    K       + L L +   + + AV +  S+     + V  M 
Sbjct: 107 VTESELAGVGEGSSLVGIKEDHTYTVHDLWLGVFLRSGNDAVHVLASMYGGMPQTVAAMQ 166

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQI 190
             ++ L    T  ++  G       ++A D+ +++                       + 
Sbjct: 167 KHAEELQALDTVVVSPDGYDAPRQVSSAYDLTLIARSGMQKKDFREYAATASADFPGEKK 226

Query: 191 KGLEIKGKKYPNTNWAV------GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           KG +    +  NTN  +        + G  G+K G+T  +G      A +  + L+  ++
Sbjct: 227 KGKKRDSFEIQNTNRLITGDIGVDPYKGIAGVKNGYTTHAGNTFTGVAERNGKVLLVTVM 286

Query: 245 G--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
              A + +   K +A LL  GF        +  ++   
Sbjct: 287 NPSAEESHAVYKEAAKLLDWGFAASGKVTPVGELVPPK 324


>gi|89108951|ref|AP_002731.1| D-alanyl-D-alanine endopeptidase [Escherichia coli str. K-12
           substr. W3110]
 gi|162135905|ref|NP_416638.4| D-alanyl-D-alanine endopeptidase [Escherichia coli str. K-12
           substr. MG1655]
 gi|170081757|ref|YP_001731077.1| D-alanyl-D-alanine endopeptidase [Escherichia coli str. K-12
           substr. DH10B]
 gi|218549549|ref|YP_002383340.1| D-alanyl-D-alanine endopeptidase [Escherichia fergusonii ATCC
           35469]
 gi|218690282|ref|YP_002398494.1| D-alanyl-D-alanine endopeptidase [Escherichia coli ED1a]
 gi|238901318|ref|YP_002927114.1| D-alanyl-D-alanine endopeptidase [Escherichia coli BW2952]
 gi|254162149|ref|YP_003045257.1| D-alanyl-D-alanine endopeptidase [Escherichia coli B str. REL606]
 gi|256017698|ref|ZP_05431563.1| D-alanyl-D-alanine endopeptidase [Shigella sp. D9]
 gi|256022181|ref|ZP_05436046.1| D-alanyl-D-alanine endopeptidase [Escherichia sp. 4_1_40B]
 gi|297518989|ref|ZP_06937375.1| D-alanyl-D-alanine endopeptidase [Escherichia coli OP50]
 gi|306814750|ref|ZP_07448912.1| D-alanyl-D-alanine endopeptidase [Escherichia coli NC101]
 gi|307138792|ref|ZP_07498148.1| D-alanyl-D-alanine endopeptidase [Escherichia coli H736]
 gi|309788012|ref|ZP_07682621.1| D-alanyl-D-alanine endopeptidase [Shigella dysenteriae 1617]
 gi|161788972|sp|P0AFI5|PBP7_ECOLI RecName: Full=D-alanyl-D-alanine endopeptidase;
           Short=DD-endopeptidase; AltName: Full=Penicillin-binding
           protein 7; Short=PBP-7; Flags: Precursor
 gi|161788973|sp|P0AFI6|PBP7_SHIFL RecName: Full=D-alanyl-D-alanine endopeptidase;
           Short=DD-endopeptidase; AltName: Full=Penicillin-binding
           protein 7; Short=PBP-7; Flags: Precursor
 gi|24052567|gb|AAN43742.1| penicillin-binding protein 7 [Shigella flexneri 2a str. 301]
 gi|30041834|gb|AAP17561.1| penicillin-binding protein 7 [Shigella flexneri 2a str. 2457T]
 gi|85675248|dbj|BAE76611.1| D-alanyl-D-alanine endopeptidase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082054|gb|AAC75195.2| D-alanyl-D-alanine endopeptidase [Escherichia coli str. K-12
           substr. MG1655]
 gi|169889592|gb|ACB03299.1| D-alanyl-D-alanine endopeptidase [Escherichia coli str. K-12
           substr. DH10B]
 gi|218357090|emb|CAQ89723.1| D-alanyl-D-alanine endopeptidase [Escherichia fergusonii ATCC
           35469]
 gi|218427846|emb|CAR08759.2| D-alanyl-D-alanine endopeptidase [Escherichia coli ED1a]
 gi|222033896|emb|CAP76637.1| Penicillin-binding protein 7 [Escherichia coli LF82]
 gi|238860732|gb|ACR62730.1| D-alanyl-D-alanine endopeptidase [Escherichia coli BW2952]
 gi|242377776|emb|CAQ32539.1| penicillin-binding protein 7 [Escherichia coli BL21(DE3)]
 gi|253974050|gb|ACT39721.1| D-alanyl-D-alanine endopeptidase [Escherichia coli B str. REL606]
 gi|253978218|gb|ACT43888.1| D-alanyl-D-alanine endopeptidase [Escherichia coli BL21(DE3)]
 gi|281179227|dbj|BAI55557.1| penicillin-binding protein 7 [Escherichia coli SE15]
 gi|305852144|gb|EFM52596.1| D-alanyl-D-alanine endopeptidase [Escherichia coli NC101]
 gi|308924146|gb|EFP69644.1| D-alanyl-D-alanine endopeptidase [Shigella dysenteriae 1617]
 gi|309702448|emb|CBJ01774.1| penicillin-binding protein 7 [Escherichia coli ETEC H10407]
 gi|312946753|gb|ADR27580.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|323171786|gb|EFZ57430.1| D-alanyl-D-alanine endopeptidase [Escherichia coli LT-68]
 gi|323187854|gb|EFZ73150.1| D-alanyl-D-alanine endopeptidase [Escherichia coli RN587/1]
 gi|332343912|gb|AEE57246.1| D-alanyl-D-alanine endopeptidase [Escherichia coli UMNK88]
 gi|333001268|gb|EGK20836.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri VA-6]
 gi|333001918|gb|EGK21484.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri K-218]
          Length = 310

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|307273627|ref|ZP_07554855.1| putative beta-lactamase [Enterococcus faecalis TX0855]
 gi|306509640|gb|EFM78682.1| putative beta-lactamase [Enterococcus faecalis TX0855]
          Length = 493

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|254992369|ref|ZP_05274559.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J2-064]
          Length = 272

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANATAVYSVENGEPLYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|160935078|ref|ZP_02082464.1| hypothetical protein CLOLEP_03954 [Clostridium leptum DSM 753]
 gi|156866531|gb|EDO59903.1| hypothetical protein CLOLEP_03954 [Clostridium leptum DSM 753]
          Length = 460

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 80/384 (20%), Positives = 145/384 (37%), Gaps = 50/384 (13%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIA---------ETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ L+++   + + ++IF F + A                  + + +TG V+     D 
Sbjct: 1   MKKKLILLFSCLFLFTSIFAFPASAAGDEGFTIDFETNCNAIFMKNLDTGTVVFTKNADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS-TFKKGSTMTLDNAL 108
              PAS TK++T  VV   +++      T     K++ E   S+      G TM++  AL
Sbjct: 61  RIEPASTTKILTYIVVSENVEDLDGTTVTLTQELKDSLEGTGSSIANIMVGETMSIYEAL 120

Query: 109 KLLIVKSANDIAVAIAESLC-------------KTEKKFVQHMNNTSKNLGLSATHFMNA 155
             L+V S ND AV +A+ +                  +FVQ MN+ +  LG + THF N 
Sbjct: 121 NCLMVPSGNDAAVILADYVGGRKNQETGNPEKLSNIDRFVQMMNDKAAELGCTGTHFANP 180

Query: 156 HGVVQHGHYTTARDMAILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYPNTN------ 204
            G+    HYTTARDM I++          D     ++        + ++   TN      
Sbjct: 181 DGLHDENHYTTARDMGIMAEYAMDLPRFMDIVSQTYHIVPATNMQEERRLDTTNLMMLPG 240

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--------RNTRNKVS 256
           +    +    G+KTG+   +G  IV +A     + + V +G+           N     S
Sbjct: 241 YPDYYYQYVTGIKTGWHDQAGDCIVTTAKAEGYAYLCVAMGSPHVAGQDPVPDNGAMIDS 300

Query: 257 ASLLSMGFYNKTDR------KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            +L    F   T +      K +  +  +   +  +  +    +       ++   +  +
Sbjct: 301 KALYRWAFRTFTLKSIVDMEKPLAEVNLNLAWEKDTLLLVPEKDVTALLPNDVDLNSIVV 360

Query: 311 KEAKDKESHFIDFEKITLLKNKIT 334
            E +  ES      K  +L     
Sbjct: 361 SEVEKPESVNAPITKGEILGKATL 384


>gi|238794079|ref|ZP_04637696.1| D-alanyl-D-alanine endopeptidase [Yersinia intermedia ATCC 29909]
 gi|238726584|gb|EEQ18121.1| D-alanyl-D-alanine endopeptidase [Yersinia intermedia ATCC 29909]
          Length = 311

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 99/266 (37%), Gaps = 15/266 (5%)

Query: 8   IAMAMLSNIFPFLS-----IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           I++  L+     ++                ++D  T  VI  N  D     AS+TKLMTA
Sbjct: 19  ISVIPLATASGGMAEIKGKAPLELASGSAMVVDLQTNKVIYANNADEVVPIASITKLMTA 78

Query: 63  YVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            VV       K  L   I++      E     S  +  S ++  + L L ++ S N  A 
Sbjct: 79  MVVLDA----KLPLDEIISVDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAA 134

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           ++A         F++ MN  +K+LG++ T ++   G+      T      +L    +   
Sbjct: 135 SLAHHYPGGYNAFIKAMNVKAKSLGMTKTRYVEPTGLSIDNVSTARDLTKLLMATKQYPL 194

Query: 182 PQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGD 236
              +     K    +   Y     NTN  V          KTGFT  +G  +    + G+
Sbjct: 195 IGQLSTTTEKMATFRDPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGN 254

Query: 237 QSLIAVILGALDRNTRNKVSASLLSM 262
           + +  V+L A  + T    +  L S 
Sbjct: 255 RPVALVVLDAFGKYTHFADANRLRSW 280


>gi|206560567|ref|YP_002231332.1| D-alanyl-D-alanine endopeptidase [Burkholderia cenocepacia J2315]
 gi|198036609|emb|CAR52506.1| D-alanyl-D-alanine endopeptidase (penicillin-binding protein
           precursor) [Burkholderia cenocepacia J2315]
          Length = 388

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS++KLMTA VV              
Sbjct: 126 TPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASISKLMTAMVVLDSKSPMT---DQL 182

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 183 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 242

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K+LG++ THF N+ G+    + ++ARD+  +           Q+      +    K 
Sbjct: 243 AKAKSLGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKR 301

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 302 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 361

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 362 DASRLRNW 369


>gi|315653180|ref|ZP_07906105.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners ATCC
           55195]
 gi|315489545|gb|EFU79182.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners ATCC
           55195]
          Length = 429

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 116/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +   K    T +  S+
Sbjct: 63  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTVYLTLKAINAGKISWQTKVMPSR 122

Query: 85  NASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +              T+    +  +++SAN  A+ +A ++  + KKFV  M  
Sbjct: 123 EAIAVSKNPEYSNVPLQLGHQYTIKQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 182

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 183 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDMGILIKHLLLEFPQVLD 242

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L+     K  K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 243 TTRISKLDFLDGRKTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 301

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + +I VI+GA         R   +  L +  + N +      +              P 
Sbjct: 302 GRRIITVIIGARHLNGSDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 361

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 362 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 405


>gi|238920707|ref|YP_002934222.1| D-alanyl-D-alanine endopeptidase [Edwardsiella ictaluri 93-146]
 gi|238870276|gb|ACR69987.1| D-alanyl-D-alanine endopeptidase [Edwardsiella ictaluri 93-146]
          Length = 309

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 12/254 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
               L    T       ++D N   VI  ++PD     AS+TKLMTA V           
Sbjct: 32  AAAELRAPLTLASGSAMVVDLNNHQVIYASHPDIQVPIASITKLMTAMVTLDAHP----N 87

Query: 76  LTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           L   I +  + ++      S  + GS +T    L L ++ S N  A  +A         F
Sbjct: 88  LDEVIAVDIHRTKELKGVFSRVRVGSELTRRQMLLLALMSSENRAAATLAHHYPGGYDAF 147

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YMHYFQIKGL 193
           ++ MN  ++ LG++ TH++   G+    + ++ARD+  L    K       +   + + +
Sbjct: 148 IRAMNAKARALGMTRTHYVEPTGL-SPDNVSSARDLVKLLQAAKGYPLIGELSTTETRSV 206

Query: 194 EIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                 Y     NTN  +          KTGFT  +G  +    + G + +  V+L A  
Sbjct: 207 TFTHPTYTETFNNTNHLLRNDKWDIQMTKTGFTNQAGHCLAMRTVIGGRPVALVVLDAFG 266

Query: 249 RNTRNKVSASLLSM 262
           + T    +  L   
Sbjct: 267 KYTHFADANRLREW 280


>gi|315284191|ref|ZP_07872092.1| beta-lactamase [Listeria marthii FSL S4-120]
 gi|313612161|gb|EFR86402.1| beta-lactamase [Listeria marthii FSL S4-120]
          Length = 269

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 6/243 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G ++ E   D     ASLTKLMTA++V   +  KK      + + + 
Sbjct: 29  LSAQSAAVFSVENGKMLYEKNADKVMPIASLTKLMTAFLVLEAVDNKKLSWDEQLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++V SAND A  +          F Q MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLVMSANDAAETLG--DRLEGASFPQKMNNEAKKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQI-KGLEIKGKKYP 201
           GLS  T F++A G+   G    +T +D+ +LS ++ +   + +        +  +G K  
Sbjct: 147 GLSNKTKFVSASGLDVDGEMAVSTTKDLFLLSSKLISTHSEVLETTSKSSIITEEGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G   G DG+KTGFT  +G+  + +A +G + +I+++L       R K +  L+ 
Sbjct: 207 STNDLIGAIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDTDTAEKRFKDTEQLMK 266

Query: 262 MGF 264
           +GF
Sbjct: 267 VGF 269


>gi|259909020|ref|YP_002649376.1| D-alanyl-D-alanine endopeptidase [Erwinia pyrifoliae Ep1/96]
 gi|224964642|emb|CAX56156.1| Penicillin-binding protein 7 (D-alanyl-D-alanine-endopeptidase)
           [Erwinia pyrifoliae Ep1/96]
          Length = 295

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 12/251 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +           ++D N+  VI E++PD     AS+TKLMT  V           L  
Sbjct: 14  SSAARPAIASGSAMIVDLNSNKVIYESHPDRVRPIASITKLMTVMVTLDA----HLPLDE 69

Query: 79  PITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + +   +  +     S  +  S ++  N + L ++ S N  A ++A         F++ 
Sbjct: 70  MLKVDISHTPQMRGIYSRVRLNSELSRKNMMLLALMSSENRAAASLAHHYPGGYDAFIRA 129

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN  ++ LG+S T ++   G+    + +TARD++ L      + +               
Sbjct: 130 MNAKARALGMSHTRYVEPTGL-SIDNVSTARDLSKLLQATKRYPLIGQLSTTHEDMASFR 188

Query: 193 LEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  + NTN  V          KTGFT  +G  +V   +   + +  V+L A  + T
Sbjct: 189 SPNYTLPFRNTNHLVYRPDWNIQLTKTGFTNEAGHCLVMRTVINQRPVSLVVLDAFGKYT 248

Query: 252 RNKVSASLLSM 262
               ++ L   
Sbjct: 249 HFADASRLRQW 259


>gi|332528109|ref|ZP_08404140.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rubrivivax
           benzoatilyticus JA2]
 gi|332112680|gb|EGJ12473.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rubrivivax
           benzoatilyticus JA2]
          Length = 353

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 10/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
               K     ++D  T  ++     +     AS+TKLMT  +V    +     L   +TI
Sbjct: 99  PLDLKSSVALVVDQETDQILLSKNSNAVLPIASITKLMTGLLVTEAQQP----LDEVLTI 154

Query: 83  SKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++  +    S+S  + G+ +T    L L ++ S N  A A+          FVQ MN  
Sbjct: 155 TQDDVDTEKGSHSRLQVGTQLTRGEMLHLALMSSENRAANALGRHYPGGLSAFVQAMNAK 214

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---KGK 198
           +K LG+  T ++   G+    + ++ARD+A+L                         +  
Sbjct: 215 AKLLGMHDTRYVEPTGL-SSNNQSSARDLAVLVKAAYQHPILRELSTSTDASVAVGRRQL 273

Query: 199 KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           ++  TN  V       G  KTG+   +G  +V  A    ++LI V+L +  + +R   + 
Sbjct: 274 QFHTTNGLVRNPSWEIGLQKTGYISEAGRCLVMQAQLAGRNLIMVLLDSAGKYSRIGDAE 333

Query: 258 SLLSM 262
            +   
Sbjct: 334 RIRKW 338


>gi|315154713|gb|EFT98729.1| putative beta-lactamase [Enterococcus faecalis TX0043]
          Length = 493

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  ++        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGNQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|160944238|ref|ZP_02091467.1| hypothetical protein FAEPRAM212_01747 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444420|gb|EDP21424.1| hypothetical protein FAEPRAM212_01747 [Faecalibacterium prausnitzii
           M21/2]
          Length = 466

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 69/347 (19%), Positives = 123/347 (35%), Gaps = 16/347 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             V ++  +       + +    +     L + +TG  I     D     ASLTKLMTA 
Sbjct: 53  LAVAVSAVLPVFAVYPMPVQTATETEAVYLFNADTGKTILNQNADQQKYVASLTKLMTAL 112

Query: 64  VVFSFLKE---KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           ++    K+   +  + T      K+      +    + G T+   + L  +++ SAND A
Sbjct: 113 LLVESGKDLNGEVTVPTDLTQEFKDIQNANGTTIGLRIGETVRRIDLLNAMLIVSANDAA 172

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
             IA  +  +   FVQ MN  +  LG + T+F  AHG+  +G+ +TA+D+A ++     +
Sbjct: 173 SVIAWDVGGSVVGFVQQMNAKAAELGCTGTNFTCAHGLFDYGNVSTAQDLAKIAAACAEN 232

Query: 181 FPQYM------HYFQIKGLEIKGKKYPNTNWAV-----GTFLGADGMKTGFTCASGFNIV 229
                      +      L        ++N  +             +K GFT  +G  IV
Sbjct: 233 QTFAQVAGTASYVLPATNLRKAEHTISSSNSLMNSESSNYREYVKWVKGGFTTLAGRCIV 292

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN-YIIKDFYQQNLSNE 288
           A A Q   +   VILG             L    F +  DR  ++   +           
Sbjct: 293 AFAQQDGHNYGLVILGCDTLEHLFTACDDLFDWAFASFADRPLVDTKTVLTTVDLTKCRT 352

Query: 289 VPNISEEVCTTQKEIINYNTQMKEA-KDKESHFIDFEKITLLKNKIT 334
            P++            + + ++  +    ES     +    L     
Sbjct: 353 EPSVELYAAAPVSGYGHSDDKVSYSFDLPESVSATVKDGQKLGTATV 399


>gi|325690106|gb|EGD32110.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK115]
          Length = 455

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVMDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AISFKGYYNPQNYDNTLSNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|324993328|gb|EGC25248.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK405]
 gi|332362608|gb|EGJ40406.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK49]
          Length = 455

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 148/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +A L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIAFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|325911591|ref|ZP_08173999.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners UPII
           143-D]
 gi|325476577|gb|EGC79735.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners UPII
           143-D]
          Length = 425

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 116/343 (33%), Gaps = 34/343 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDMGILIKHLLLEFPQVLE 238

Query: 187 YFQIKGLEI----KGKKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
             +I  L+     K  K  N N               DG+KTG T A+G  + ++ ++  
Sbjct: 239 TTRIAKLDFLDGRKTFKMVNWNLMLKGLSQYNETYPVDGLKTGTTDAAGACLASTLVKNG 298

Query: 237 QSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           + ++ VI+GA     +   R   +  L +  + N +      +              P  
Sbjct: 299 RRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNSPIN 358

Query: 293 SEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
               C  Q   I  +   ++          +  +  T +   I
Sbjct: 359 EVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|318604889|emb|CBY26387.1| murein-DD-endopeptidase [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|330859412|emb|CBX69757.1| D-alanyl-D-alanine endopeptidase [Yersinia enterocolitica W22703]
          Length = 322

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 92/247 (37%), Gaps = 10/247 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T  VI  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 49  APLELASGSAMVVDLQTNKVIYANNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 104

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F+  MN 
Sbjct: 105 VDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFINAMNA 164

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K+LG++ T ++   G+  +   T      +L    +      +     K    +   Y
Sbjct: 165 KAKSLGMTKTRYVEPTGLSINNVSTARDLTKLLIATKQYPLIGQLSTTTEKMATFREPNY 224

Query: 201 ----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V          KTGFT  +G  +    + G++ +  V+L A  + T    
Sbjct: 225 TLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVALVVLDAFGKYTHFAD 284

Query: 256 SASLLSM 262
           +  L S 
Sbjct: 285 ANRLRSW 291


>gi|294779975|ref|ZP_06745355.1| putative beta-lactamase [Enterococcus faecalis PC1.1]
 gi|294452956|gb|EFG21378.1| putative beta-lactamase [Enterococcus faecalis PC1.1]
 gi|315034829|gb|EFT46761.1| putative beta-lactamase [Enterococcus faecalis TX0027]
 gi|315146578|gb|EFT90594.1| putative beta-lactamase [Enterococcus faecalis TX4244]
          Length = 493

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|213028272|ref|ZP_03342719.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 239

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 5/226 (2%)

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA
Sbjct: 1   NLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMA 60

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVA 230
           ++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+VA
Sbjct: 61  LIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVA 120

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLS 286
           SA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N  
Sbjct: 121 SATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTD 180

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                + ++V  T       + +     +        +K  ++   
Sbjct: 181 RASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 226


>gi|307284847|ref|ZP_07565003.1| putative beta-lactamase [Enterococcus faecalis TX0860]
 gi|306503106|gb|EFM72363.1| putative beta-lactamase [Enterococcus faecalis TX0860]
          Length = 493

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|284800301|ref|YP_003412166.1| hypothetical protein LM5578_0046 [Listeria monocytogenes 08-5578]
 gi|284993486|ref|YP_003415254.1| hypothetical protein LM5923_0046 [Listeria monocytogenes 08-5923]
 gi|284055863|gb|ADB66804.1| hypothetical protein LM5578_0046 [Listeria monocytogenes 08-5578]
 gi|284058953|gb|ADB69892.1| hypothetical protein LM5923_0046 [Listeria monocytogenes 08-5923]
          Length = 272

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEALYEKKTDKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLNLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-KYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|254247777|ref|ZP_04941098.1| Peptidase S11 [Burkholderia cenocepacia PC184]
 gi|124872553|gb|EAY64269.1| Peptidase S11 [Burkholderia cenocepacia PC184]
          Length = 388

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS++KLMTA VV              
Sbjct: 126 TPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASISKLMTAMVVLDAKSPMT---DQL 182

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 183 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 242

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  +           Q+      +    K 
Sbjct: 243 AKAKALGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKR 301

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 302 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 361

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 362 DASRLRNW 369


>gi|326778216|ref|ZP_08237481.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326658549|gb|EGE43395.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 299

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 15/271 (5%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A  S                  +++  TG  +     D   +  S TK+MTA VV S   
Sbjct: 29  AFASTAHAATPPTPKIVAKGGFVMNDGTGKTLFTKSADTRRSTGSTTKIMTALVVLSQKN 88

Query: 71  EKKAMLTTPIT-ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                  T     S    +   S++    G   T+   L  L++ S  D A A+A+    
Sbjct: 89  VNLKSKVTVQKAYSDYIVKKNASSARLIVGDKPTVGQLLYGLMLPSGCDAAYALADKFGS 148

Query: 130 TEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD--------MAILSW 175
            + +  +       MN T+K+L L  THF +  G+    +Y+T RD        M   ++
Sbjct: 149 GKTRAARVKSFIGKMNATAKSLKLKNTHFDSFDGIGGGNNYSTPRDLTKIASKAMKNATF 208

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
           R              K    +   + NTN  + ++ G  G+KTG    + + +V +A + 
Sbjct: 209 RSIVKTKSTKQKVTTKSGGYRYMSWNNTNKMLSSYSGDIGVKTGSGPTAKYCLVFAATRK 268

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +++I  +L +     R   +  L+  GF  
Sbjct: 269 GKTVIGTVLTSSSEANRTADAKKLMDYGFKK 299


>gi|29827852|ref|NP_822486.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces avermitilis
           MA-4680]
 gi|29604953|dbj|BAC69021.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           avermitilis MA-4680]
          Length = 388

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 95/287 (33%), Gaps = 16/287 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + + D  TG V+A +    P  PAS  K + A  +   L        
Sbjct: 64  AGAPEVPNVSALSWLVADAGTGDVLASHDAHRPLPPASTLKTLFALTMLPTLPGGIRHTV 123

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               +         S     +G T  + +  + + + S ND    +A  +          
Sbjct: 124 AEREL--EGLGDGSSTVGVTEGQTYQVTDLWRGIFLHSGNDAVHVLAS-MNGGWDTTAHQ 180

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           M   ++ LG   TH ++  G    G  ++A D+AI       +   +  Y          
Sbjct: 181 MQAKARALGALDTHVVSPDGYDAPGQTSSAYDLAIFGRAGL-NREDFARYCSTVDATFPG 239

Query: 196 --KGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                +  NTN        +  + G  G+K G+T  +G  +VA+A +G ++L+  +L   
Sbjct: 240 NGGAYEIQNTNRLLTGADGIAPYPGLIGVKNGYTSNAGNTLVAAARRGGRTLVVTVLNPQ 299

Query: 248 DRN--TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
                   + + SLL  GF        +  ++            P+ 
Sbjct: 300 SGGGLAVYEEARSLLDWGFGAAGRVDPVGSLLSARTVAQAGPATPDA 346


>gi|302553699|ref|ZP_07306041.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302471317|gb|EFL34410.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 436

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 94/289 (32%), Gaps = 32/289 (11%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEK 72
                 + +      + + D  TG V+A +       PAS  K++   T    F   ++ 
Sbjct: 73  ASGVPVLPKDVSARSWIVADAETGDVLAAHNAHWRLAPASTLKMLFADTLLPKFPRTEKH 132

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K + +    I   +S              + L   L+          AV +  ++ +  +
Sbjct: 133 KVVPSDLAGIGAGSSMVGIKEDETYTVHDLWLGVFLRSGND------AVHVLSAMNQGVE 186

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
             V+ MN  ++ L    TH ++  G    G  ++A D+ + +         +  Y     
Sbjct: 187 NTVKEMNQHAEELQALDTHVVSPDGYDAEGQVSSAYDLTLFARSGLQK-KDFREYCSTVS 245

Query: 193 LEI--------------KGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASA 232
            +               +  +  NTN        +  + G  G+K G T  +G      A
Sbjct: 246 AKFPGQTKKGKKGKTVRESFEIQNTNRLLAGDADLPVYQGIAGVKNGNTTNAGATFTGVA 305

Query: 233 IQGDQSLIAVILGALDR--NTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
            +  + L+  ++       N   K +A L   GF      + +  ++  
Sbjct: 306 ERDGKVLLVTVMNPEKPEHNEVYKETARLFDWGFKAAGKVQPVGELVPP 354


>gi|325694037|gb|EGD35955.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK150]
          Length = 455

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|254827380|ref|ZP_05232067.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258599758|gb|EEW13083.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
          Length = 272

 Score =  125 bits (313), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEALYEKKTDKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLNLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-KYP 201
           G+S+ T F++A G+   G    +T +D+ +LS ++ +  P+ +       +      K  
Sbjct: 147 GMSSKTTFVSASGLDVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKPTVTTDKGAKLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN  +G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R K +  L+ 
Sbjct: 207 STNDLLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLME 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 VGFK 270


>gi|310767083|gb|ADP12033.1| penicillin-binding protein 7 [Erwinia sp. Ejp617]
          Length = 316

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 12/251 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +           ++D N+  VI E++PD     AS+TKLMT  V           L  
Sbjct: 35  SSAAQPAIASGSAMIVDLNSNKVIYESHPDRVRPIASITKLMTVMVTLDA----HLPLDE 90

Query: 79  PITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + +   +  +     S  +  S ++  N + L ++ S N  A ++A         F++ 
Sbjct: 91  MLKVDISHTPQMRGIYSRVRLNSELSRKNMMLLALMSSENRAAASLAHHYPGGYDAFIRA 150

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN  ++ LG+S T ++   G+    + +TARD++ L      + +               
Sbjct: 151 MNAKARALGMSHTRYVEPTGL-SIDNVSTARDLSKLLQATKRYPLIGQLSTTHEDMASFR 209

Query: 193 LEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  + NTN  V          KTGFT  +G  +V   +   + +  V+L A  + T
Sbjct: 210 SPNYTLPFRNTNHLVYRPDWNIQLTKTGFTNEAGHCLVMRTVINQRPVSLVVLDAFGKYT 269

Query: 252 RNKVSASLLSM 262
               ++ L   
Sbjct: 270 HFADASRLRQW 280


>gi|227517264|ref|ZP_03947313.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis TX0104]
 gi|227075271|gb|EEI13234.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis TX0104]
          Length = 493

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSYGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|315171194|gb|EFU15211.1| putative beta-lactamase [Enterococcus faecalis TX1342]
          Length = 493

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 143/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F + A                              ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQATVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|317124333|ref|YP_004098445.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Intrasporangium calvum DSM 43043]
 gi|315588421|gb|ADU47718.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Intrasporangium calvum DSM 43043]
          Length = 898

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 107/283 (37%), Gaps = 19/283 (6%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A  +++++              Y L D +TG V+A   P     PAS  K +TA  + 
Sbjct: 105 LAATGLVADVPAGAHRPPPVPDVSYVLADLDTGEVLAAKSPHAWLRPASTLKTLTALALI 164

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                 +      +  +        +      G+   +       ++ S+ + A  +   
Sbjct: 165 P-----RLDPARRVLATSEHEAADGTRVGILAGNRYPVSTLF-DALLLSSANDAAYLLAD 218

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-------- 178
                ++ V  MN T+  LG   T  ++  G+ + G +++A D+A++             
Sbjct: 219 AAGGYEQTVSLMNETAVGLGAHDTVAVDPSGLDEDGQHSSAYDLALIGRAAMRLPTFRSY 278

Query: 179 ---TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
               D        +  G   +  +  N N  +G + GA G+K G T  +    + +A + 
Sbjct: 279 VSKRDAAFPGGTNRATGTVYRSFQIQNINELLGRYPGAIGIKPGRTNRAQHTFIGAATRA 338

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
            ++LI   +G+   +   K +A+LL  GF N      +  +++
Sbjct: 339 GRTLIVTQMGSTTGD--WKDTAALLDWGFANADVASPVGVLVE 379


>gi|315172967|gb|EFU16984.1| putative beta-lactamase [Enterococcus faecalis TX1346]
          Length = 493

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 145/385 (37%), Gaps = 63/385 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQM-KEAKDKESHFIDFEKI 326
            +  +T +       +   + ++++
Sbjct: 375 QVQVDTPLTLLNSTVQPPKVAYQEV 399


>gi|291542985|emb|CBL16095.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus bromii L2-63]
          Length = 450

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/354 (19%), Positives = 122/354 (34%), Gaps = 23/354 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +II  A  +            +     L++ ++G  + E   D    PAS TK+MT  
Sbjct: 15  LCIIICSAFTTAGAASYPNDVKTESDSILLVNMDSGQTVYEKDADSKRYPASTTKIMTYI 74

Query: 64  VVFSFL---KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           +    +      K  +   +      +    +N     G +MT  + L  ++V S ND A
Sbjct: 75  IAVENIADLDNTKIPIKQSVLDVLKNTGSSLANVENHVGKSMTAIDLLYSMMVPSGNDAA 134

Query: 121 VAIAESLCK-TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           + +A+ + +     FV+ MN  +K LG   THF N  G+    HYTTARDM  ++    T
Sbjct: 135 MVLADYIGEGNVDNFVKLMNEKAKELGCENTHFANPDGLHDPDHYTTARDMYKITTYALT 194

Query: 180 DFPQYMHYFQIKGLEIKGKK-YPNTNW-------AVGTFLGADGMKTGFTCASGFNIVAS 231
                                   TN+           ++ A G+KTG T  +G  +V +
Sbjct: 195 LPRFEEITNTCTYTCDGDDTALVTTNYLIDANRGGEYYYMYAKGIKTGTTNEAGRCLVTT 254

Query: 232 AIQGDQSLIAVILGALDRNTRNK------VSASLLSMGFYNKTDRKKINYIIKDFYQQ-- 283
           A     S +A++L A       +       +A L      +                +  
Sbjct: 255 ASADGYSYMAILLHAPYEEGVTEDYATMTDAADLFRWALTSLEMNTVATSSKPLCEVKVN 314

Query: 284 ---NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                ++ +     ++     +       + E    ES     +K +++     
Sbjct: 315 LAWGKNSTLLYPETDLSAIVPKDCTDENIIIEQDVPESVDAPLDKGSVVGKATI 368


>gi|228477469|ref|ZP_04062105.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus salivarius
           SK126]
 gi|228250904|gb|EEK10092.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus salivarius
           SK126]
          Length = 448

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 70/358 (19%), Positives = 129/358 (36%), Gaps = 36/358 (10%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           ++    +    E  +     L+D NTG V+ E   D   +PAS++K MT Y+VF  + + 
Sbjct: 29  ITRAAGYTEATEAYRPKSTLLIDGNTGDVLWEENADEVRDPASMSKAMTLYLVFEAMSKG 88

Query: 73  KAMLTTPITISKNAS-----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
           +    T IT +             +N           +      +  S     +      
Sbjct: 89  EISEDTVITATPTDQAIADIYEISNNKIVAGVDYTVSELITMTAVPSSNVTTVMLANYLT 148

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHG---------------VVQHGHYTTARDMAI 172
                K++  MN  SK LG++ T + NA G                    + TTARD+AI
Sbjct: 149 NNDPDKWLDMMNEKSKELGMTNTKWFNASGAVAVAFKGYYSPQRYDNNQTNQTTARDLAI 208

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTCA 223
           +++     +P  + Y     + +K        +    +          G DG+KTG +  
Sbjct: 209 MTYNFIKKYPDILKYTSKPVVTVKKGTPYEETFETYNYSIPGAKYGIDGVDGLKTGSSPE 268

Query: 224 SGFNIVASAIQGDQSLIAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
             FN + +  +GDQ +IAVI+G+           R+    +L+   + + + +K ++   
Sbjct: 269 GAFNYIDTIKRGDQRMIAVIMGSGDWSDQTGEEIRHTFGNALVEKMYKDFSYKKVLSKGE 328

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           ++       N   ++   V   +   I+         +         K T +K    K
Sbjct: 329 QEI-DGKKYNVEKDVYATVKKGKDPKISVKDDHIVIDNGLKTVSPNIKATSVKATKVK 385


>gi|332363024|gb|EGJ40811.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK355]
          Length = 455

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQAIANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNTLSNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FDTYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|297192554|ref|ZP_06909952.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297151396|gb|EDY62003.2| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 461

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 94/305 (30%), Gaps = 26/305 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAM 75
              + +      + + D  +G V+A +       PAS  K++   T           K  
Sbjct: 114 APVLPKDVSGRSWIVADAESGEVLASHNAHWRLPPASTMKMLFADTLLPRLPKTTVHKVA 173

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                 +   +S      +       M L   L+          AV +  ++     + V
Sbjct: 174 PAELADVGAGSSLVGIKENHTYTVHDMWLGVFLRSGND------AVHVLSAMNGGISRTV 227

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY-------- 187
             M   ++ L    T  ++  G    G  ++A D+ +++           +         
Sbjct: 228 ADMQAHAEELQALDTKVVSPDGYDAPGQVSSAYDLTLIARSGMQKKDFREYCSTVSADFP 287

Query: 188 -FQIKGLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             Q KG +    K  NTN        +  + G  G+K G T  +G      A +  + L+
Sbjct: 288 GEQKKGKKRGTFKIQNTNRLLTGASGISPYKGIAGVKNGSTTHAGSTFTGVAERNGKVLL 347

Query: 241 AVILGALD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
             ++           K +  LL  GF      + +  ++     +  ++  P   ++   
Sbjct: 348 VTVMNPDSGESQAVYKEAGRLLDWGFAAAGKVQPVGELVPPKSAEPAASLDPQPVKDEGK 407

Query: 299 TQKEI 303
            +   
Sbjct: 408 DEPAG 412


>gi|257083197|ref|ZP_05577558.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis Fly1]
 gi|256991227|gb|EEU78529.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis Fly1]
          Length = 475

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 135/348 (38%), Gaps = 43/348 (12%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T +
Sbjct: 37  PDGIPKAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTAT 96

Query: 84  KNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHM 138
           +   +       SN+    G    +   LK++ V S+N   + +A  +   +   FV  M
Sbjct: 97  QKDVDISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLM 156

Query: 139 NNTSKNLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQ 183
           N  +  LG++ T + N  G                    + +TARD+A L++    ++P+
Sbjct: 157 NQKAAELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPE 216

Query: 184 YMHYF-----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQ 234
            +        +        + +   N++       + G DG+KTG +   GFN +A+  Q
Sbjct: 217 ILEITNKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQ 276

Query: 235 GDQSLIAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL--- 285
           GD  LI VILG            R+    +LL   +     +K ++   +    + +   
Sbjct: 277 GDFRLIEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLA 336

Query: 286 ---SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 VP  S+         +  +T +       +          +K
Sbjct: 337 NDLYGVVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|530915|gb|AAA68436.1| Highly similar to the E.coli YeeC, DacA and DacC products; putative
           [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 281

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 8/244 (3%)

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              K+G  +++ +  + LIV S ND  VA+A+ +   + +FV  MN+  K L L  THF 
Sbjct: 1   MFLKEGDRVSVRDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFE 60

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFLG 212
             HG+   G +++A D+A+LS  I    P++ H +  K L   G    N N       + 
Sbjct: 61  TVHGLDAPGQHSSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMH 120

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N    + 
Sbjct: 121 IDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQI 180

Query: 273 INYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA---KDKESHFIDFEK 325
           ++   K      +  +         ++      +    + + K     K+ E+     ++
Sbjct: 181 LHSGKKVGSERIWYGDKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQ 240

Query: 326 ITLL 329
           +  +
Sbjct: 241 VGEI 244


>gi|262376983|ref|ZP_06070209.1| D-alanyl-D-alanine endopeptidase [Acinetobacter lwoffii SH145]
 gi|262308021|gb|EEY89158.1| D-alanyl-D-alanine endopeptidase [Acinetobacter lwoffii SH145]
          Length = 353

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           S   +       ++D  TG V+     +  +  AS+TKLMTA V+          + T  
Sbjct: 102 SNQPSVNARAALVMDAQTGEVLFSKNTNTAYPIASITKLMTAVVISDARLNMSEKI-TLQ 160

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
               + S    S+ST + G +M    AL   ++KS N  A A+A +       F+  MN 
Sbjct: 161 QADFSCSGCKSSSSTLRAGDSMNRAEALLFALMKSENPAAAALARTYPGGRSAFIAKMNA 220

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            +K LG+++T FM + G+   G+  +ARD+ IL     + +     +      +      
Sbjct: 221 KAKELGMNSTRFMESTGL-HPGNMASARDLGIL-VNTASQYGLIRQFSTTPSYDFNLGYR 278

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTGF   +G  +V      ++ +  V+LGA     R   
Sbjct: 279 VLKSNNTNALVRNGGWNINISKTGFINEAGRCVVMHTTLNNRPVAVVLLGANSSQARTND 338

Query: 256 SASLLSM 262
           +  L+S 
Sbjct: 339 ATRLMSW 345


>gi|329919680|ref|ZP_08276658.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners SPIN
           1401G]
 gi|328937332|gb|EGG33756.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners SPIN
           1401G]
          Length = 423

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 114/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +   K    T +  S+
Sbjct: 57  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAINAGKISWQTKVMPSR 116

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 117 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 176

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 177 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDMGILIKHLLLEFPQVLD 236

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 237 TTRISKLNFPDGHNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 295

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 296 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 355

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 356 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 399


>gi|307276651|ref|ZP_07557769.1| putative beta-lactamase [Enterococcus faecalis TX2134]
 gi|306506761|gb|EFM75913.1| putative beta-lactamase [Enterococcus faecalis TX2134]
          Length = 493

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 72/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGTFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         VP  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVVPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|307292145|ref|ZP_07572011.1| putative beta-lactamase [Enterococcus faecalis TX0411]
 gi|306496798|gb|EFM66349.1| putative beta-lactamase [Enterococcus faecalis TX0411]
          Length = 493

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVSG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|260844741|ref|YP_003222519.1| D-alanyl-D-alanine endopeptidase PbpG [Escherichia coli O103:H2
           str. 12009]
 gi|257759888|dbj|BAI31385.1| D-alanyl-D-alanine endopeptidase PbpG [Escherichia coli O103:H2
           str. 12009]
          Length = 310

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|215487356|ref|YP_002329787.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215265428|emb|CAS09829.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 310

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTVSQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|195935505|ref|ZP_03080887.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|209919593|ref|YP_002293677.1| D-alanyl-D-alanine endopeptidase [Escherichia coli SE11]
 gi|218554700|ref|YP_002387613.1| D-alanyl-D-alanine endopeptidase [Escherichia coli IAI1]
 gi|218695746|ref|YP_002403413.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 55989]
 gi|218699256|ref|YP_002406885.1| D-alanyl-D-alanine endopeptidase [Escherichia coli IAI39]
 gi|218705663|ref|YP_002413182.1| D-alanyl-D-alanine endopeptidase [Escherichia coli UMN026]
 gi|254794027|ref|YP_003078864.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|260856108|ref|YP_003229999.1| D-alanyl-D-alanine endopeptidase PbpG [Escherichia coli O26:H11
           str. 11368]
 gi|260868837|ref|YP_003235239.1| D-alanyl-D-alanine endopeptidase PbpG [Escherichia coli O111:H-
           str. 11128]
 gi|307311286|ref|ZP_07590930.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Escherichia
           coli W]
 gi|209912852|dbj|BAG77926.1| penicillin-binding protein 7 [Escherichia coli SE11]
 gi|218352478|emb|CAU98255.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 55989]
 gi|218361468|emb|CAQ99057.1| D-alanyl-D-alanine endopeptidase [Escherichia coli IAI1]
 gi|218369242|emb|CAR16999.1| D-alanyl-D-alanine endopeptidase [Escherichia coli IAI39]
 gi|218432760|emb|CAR13654.1| D-alanyl-D-alanine endopeptidase [Escherichia coli UMN026]
 gi|226237489|dbj|BAH47011.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O55:H7]
 gi|254593427|gb|ACT72788.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257754757|dbj|BAI26259.1| D-alanyl-D-alanine endopeptidase PbpG [Escherichia coli O26:H11
           str. 11368]
 gi|257765193|dbj|BAI36688.1| D-alanyl-D-alanine endopeptidase PbpG [Escherichia coli O111:H-
           str. 11128]
 gi|306908792|gb|EFN39289.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Escherichia
           coli W]
 gi|320641200|gb|EFX10678.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320646588|gb|EFX15499.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H- str.
           493-89]
 gi|320651843|gb|EFX20218.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H- str. H
           2687]
 gi|320663173|gb|EFX30482.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667924|gb|EFX34827.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323152361|gb|EFZ38650.1| D-alanyl-D-alanine endopeptidase [Escherichia coli EPECa14]
 gi|323161762|gb|EFZ47643.1| D-alanyl-D-alanine endopeptidase [Escherichia coli E128010]
 gi|323184242|gb|EFZ69619.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 1357]
 gi|323377974|gb|ADX50242.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Escherichia
           coli KO11]
 gi|332092625|gb|EGI97696.1| D-alanyl-D-alanine endopeptidase [Shigella dysenteriae 155-74]
          Length = 310

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|261340569|ref|ZP_05968427.1| beta-lactamase [Enterobacter cancerogenus ATCC 35316]
 gi|288316977|gb|EFC55915.1| beta-lactamase [Enterobacter cancerogenus ATCC 35316]
          Length = 306

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 101/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            M        +           ++D NT  VI  ++PD     AS+TKLMTA VV     
Sbjct: 23  VMAKTPAVTTAAQPQIASGSAMIVDLNTNKVIYASHPDLVRPIASITKLMTAMVVLDA-- 80

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             +  L   + +   +  E     S  +  S ++  N L L ++ S N  A ++A     
Sbjct: 81  --RLPLDEKLKVDISHTPEMKGIYSRVRLNSEISRKNMLLLALMSSENRAAASLAHHYPG 138

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  +K+LG++ T F+   G+    + +TARD+  L      + +       
Sbjct: 139 GYDAFIRAMNAKAKSLGMTNTRFVEPTGL-SIHNVSTARDLTKLLVASKRYPLLGQLSTT 197

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  +V   +   + +  V+
Sbjct: 198 REDMATFSNPPYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVFNGKPVALVV 257

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 258 MDAFGKYTHFADASRLRTW 276


>gi|82777384|ref|YP_403733.1| D-alanyl-D-alanine endopeptidase [Shigella dysenteriae Sd197]
 gi|157159398|ref|YP_001463481.1| D-alanyl-D-alanine endopeptidase [Escherichia coli E24377A]
 gi|161485895|ref|NP_708035.2| D-alanyl-D-alanine endopeptidase [Shigella flexneri 2a str. 301]
 gi|161486468|ref|NP_837752.2| D-alanyl-D-alanine endopeptidase [Shigella flexneri 2a str. 2457T]
 gi|170679983|ref|YP_001742990.1| D-alanyl-D-alanine endopeptidase [Escherichia coli SMS-3-5]
 gi|194436191|ref|ZP_03068293.1| penicillin-binding protein 7 [Escherichia coli 101-1]
 gi|253772938|ref|YP_003035769.1| D-alanyl-D-alanine endopeptidase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|293415418|ref|ZP_06658061.1| D-alanyl-D-alanine endopeptidase [Escherichia coli B185]
 gi|300818866|ref|ZP_07099071.1| beta-lactamase [Escherichia coli MS 107-1]
 gi|300924491|ref|ZP_07140460.1| beta-lactamase [Escherichia coli MS 182-1]
 gi|300929309|ref|ZP_07144783.1| beta-lactamase [Escherichia coli MS 187-1]
 gi|300936551|ref|ZP_07151460.1| beta-lactamase [Escherichia coli MS 21-1]
 gi|300955844|ref|ZP_07168185.1| beta-lactamase [Escherichia coli MS 175-1]
 gi|301021100|ref|ZP_07185141.1| beta-lactamase [Escherichia coli MS 69-1]
 gi|301325244|ref|ZP_07218762.1| beta-lactamase [Escherichia coli MS 78-1]
 gi|301644151|ref|ZP_07244159.1| beta-lactamase [Escherichia coli MS 146-1]
 gi|331642758|ref|ZP_08343893.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli H736]
 gi|331647786|ref|ZP_08348878.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli M605]
 gi|331653562|ref|ZP_08354563.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli M718]
 gi|332278712|ref|ZP_08391125.1| conserved hypothetical protein [Shigella sp. D9]
 gi|405864|gb|AAA60496.1| yohB [Escherichia coli]
 gi|81241532|gb|ABB62242.1| penicillin-binding protein 7 [Shigella dysenteriae Sd197]
 gi|157081428|gb|ABV21136.1| penicillin-binding protein 7 [Escherichia coli E24377A]
 gi|170517701|gb|ACB15879.1| penicillin-binding protein 7 [Escherichia coli SMS-3-5]
 gi|194424919|gb|EDX40904.1| penicillin-binding protein 7 [Escherichia coli 101-1]
 gi|253323982|gb|ACT28584.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Escherichia
           coli 'BL21-Gold(DE3)pLysS AG']
 gi|260448770|gb|ACX39192.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Escherichia
           coli DH1]
 gi|281601593|gb|ADA74577.1| D-alanyl-D-alanine endopeptidase precursor [Shigella flexneri
           2002017]
 gi|291433066|gb|EFF06045.1| D-alanyl-D-alanine endopeptidase [Escherichia coli B185]
 gi|300317311|gb|EFJ67095.1| beta-lactamase [Escherichia coli MS 175-1]
 gi|300398281|gb|EFJ81819.1| beta-lactamase [Escherichia coli MS 69-1]
 gi|300419300|gb|EFK02611.1| beta-lactamase [Escherichia coli MS 182-1]
 gi|300458314|gb|EFK21807.1| beta-lactamase [Escherichia coli MS 21-1]
 gi|300462728|gb|EFK26221.1| beta-lactamase [Escherichia coli MS 187-1]
 gi|300528485|gb|EFK49547.1| beta-lactamase [Escherichia coli MS 107-1]
 gi|300847904|gb|EFK75664.1| beta-lactamase [Escherichia coli MS 78-1]
 gi|301077449|gb|EFK92255.1| beta-lactamase [Escherichia coli MS 146-1]
 gi|315136767|dbj|BAJ43926.1| D-alanyl-D-alanine endopeptidase [Escherichia coli DH1]
 gi|320196004|gb|EFW70628.1| Murein-DD-endopeptidase [Escherichia coli WV_060327]
 gi|323961642|gb|EGB57247.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H489]
 gi|323977677|gb|EGB72763.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TW10509]
 gi|324114448|gb|EGC08417.1| D-alanyl-D-alanine carboxypeptidase [Escherichia fergusonii B253]
 gi|325497949|gb|EGC95808.1| D-alanyl-D-alanine endopeptidase [Escherichia fergusonii ECD227]
 gi|330911967|gb|EGH40477.1| murein-DD-endopeptidase [Escherichia coli AA86]
 gi|331039556|gb|EGI11776.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli H736]
 gi|331043510|gb|EGI15648.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli M605]
 gi|331048411|gb|EGI20487.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli M718]
 gi|332101064|gb|EGJ04410.1| conserved hypothetical protein [Shigella sp. D9]
 gi|744172|prf||2014253AF yohB gene
          Length = 313

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|329576780|gb|EGG58273.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           TX1467]
          Length = 493

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 71/388 (18%), Positives = 142/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP---------------------YYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPEAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  QGD  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|309810092|ref|ZP_07703938.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169591|gb|EFO71638.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners SPIN
           2503V10-D]
          Length = 425

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 119/344 (34%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSAGDMGILIKHLLLEFPQVLD 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRISKLNFPDGRNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTD--RKKINYIIKDFYQQNLSNEV 289
            + ++ VI+GA     +   R   +  L +  + N +    K+          +  S+ +
Sbjct: 298 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKSSSI 357

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             +   +       I+   ++          +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|284043333|ref|YP_003393673.1| serine-type D-Ala-D-Ala carboxypeptidase [Conexibacter woesei DSM
           14684]
 gi|283947554|gb|ADB50298.1| Serine-type D-Ala-D-Ala carboxypeptidase [Conexibacter woesei DSM
           14684]
          Length = 434

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/319 (19%), Positives = 123/319 (38%), Gaps = 9/319 (2%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                   P   + + ++G  +           AS TK+MTA V    L   +       
Sbjct: 52  PAPPKLSAPAAAVFEVSSGQPLYGVDAGDRRLIASTTKIMTALVAVEKLPLGRV-----C 106

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           T    A+    +    ++G  M++ + L+ L++ SAND A  +A     +   F+  MN 
Sbjct: 107 TAPAYAATPAETQIGLRQGERMSVRDLLRALMLPSANDAAATLAVCAAGSRGAFIDLMNA 166

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH---YFQIKGLEIKG 197
            ++ L L+ THF    G+    +Y+TA D+A L   ++              +       
Sbjct: 167 KARELRLADTHFATPVGLDSPANYSTAADLARLGIALRQKPFLARTVDLRSAVLRTGAFP 226

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +   N N  V +    DG+KTG T A+G+ +VAS+ +   S +A ++G    + R+  + 
Sbjct: 227 RTVVNRNGLVQSVPWVDGVKTGHTNAAGYLLVASSTRDGLSFVAAVMGTPSESARDADAL 286

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA-KDK 316
           +LL   +        +         +        I      + +E++  + ++  A +  
Sbjct: 287 ALLRWAYATHRIATPVKSGAVFARAKLKYRPEDKIDLVATRSVRELVRRDQRVVVAVRAP 346

Query: 317 ESHFIDFEKITLLKNKITK 335
           +       +  ++ +   +
Sbjct: 347 DELQGPLPRNAVVGSLTVR 365


>gi|213419096|ref|ZP_03352162.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 243

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 5/197 (2%)

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K LGL+ T F   HG+   G ++TARDMA+L   +  D P      + K       + 
Sbjct: 1   YAKRLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQ 60

Query: 201 PNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           PN N     T L  DGMKTG T  +G+N+VASA QGD  LI+V+LGA     R   S  L
Sbjct: 61  PNRNRLLWSTNLHVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKL 120

Query: 260 LSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           L+ GF        I      + +  +  +         +    T       N +     +
Sbjct: 121 LTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLGAGDAGSVTIPRGQLKNLKASFTLN 180

Query: 316 KESHFIDFEKITLLKNK 332
           +       +K  ++   
Sbjct: 181 EPQLTAPLKKGQVVGTI 197


>gi|146312376|ref|YP_001177450.1| D-alanyl-D-alanine endopeptidase [Enterobacter sp. 638]
 gi|145319252|gb|ABP61399.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Enterobacter sp. 638]
          Length = 315

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D NT  VI  ++PD     AS+TKLMTA VV     
Sbjct: 23  AIAKTPALTTAAQPEIASGSAMIVDLNTNKVIYSSHPDLVRPIASITKLMTAMVVLDA-- 80

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             +  L   + +   +  E     S  +  S ++  N L L ++ S N  A ++A     
Sbjct: 81  --RLPLDEKLKVDISHTPEMKGIYSRVRLNSEISRKNMLLLALMSSENRAAASLAHHYPG 138

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  +K+LG+  T F+   G+    + +TARD+  +      + +       
Sbjct: 139 GYDAFIRAMNAKAKSLGMKNTRFVEPTGL-SIHNVSTARDLTQMLIASKQYPLIGQLSTT 197

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  +V   +   + +  V+
Sbjct: 198 REEMATFANPAYTLPFRNTNHLVYRENWNIQLTKTGFTNAAGHCLVMRTVFNGKPVALVV 257

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 258 MDAFGKYTHFADASRLRTW 276


>gi|331683812|ref|ZP_08384408.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli H299]
 gi|331078764|gb|EGI49966.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli H299]
          Length = 313

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF                         ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLTLMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|84498026|ref|ZP_00996823.1| probable penicillin-binding protein dacb1
           (d-alanyl-d-alaninecarboxypeptidase) (dd-peptidase)
           (dd-carboxypeptidase) [Janibacter sp. HTCC2649]
 gi|84381526|gb|EAP97409.1| probable penicillin-binding protein dacb1
           (d-alanyl-d-alaninecarboxypeptidase) (dd-peptidase)
           (dd-carboxypeptidase) [Janibacter sp. HTCC2649]
          Length = 416

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 103/291 (35%), Gaps = 27/291 (9%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           +++ +    +          + + D +TG ++A   P     PAS  K +TA  +     
Sbjct: 71  SVIVDTPTGVPAPPDVSDVAWLIADADTGEILAAKNPHAHLLPASTLKTLTAIHLLP--- 127

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             +   T   T +   S    +      G T T     + L++ S ND A  +AE     
Sbjct: 128 --RLKPTAVRTATTLESNAEGTRVGMVAGGTYTAAQLFQALVMSSGNDAAYGLAELNGGL 185

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
            K   +  N  +  LG   T   +  G+   G Y++A D+A+       +   Y+     
Sbjct: 186 AKTVTEL-NGLAAELGAHDTVVADPSGLDSPGQYSSAYDLALFGRAAIANPA-YLKLAST 243

Query: 191 KGLEIKGKK-----------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           K                     N N  +  + G  G+K GFT A+    + +A +G ++ 
Sbjct: 244 KTATFPAATSRSSRSRSSYAIGNHNRLLWNYPGTIGVKNGFTKAAHRTFIGAATRGGKTY 303

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           I   +     + R   +ASLL   F +         + K   +     EVP
Sbjct: 304 IVTEMYGTGSSWR--PAASLLDWAFAH-------GAVAKPVGRLVDRGEVP 345


>gi|324006491|gb|EGB75710.1| beta-lactamase [Escherichia coli MS 57-2]
          Length = 313

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFTNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|299538369|ref|ZP_07051652.1| penicillin-binding protein 5* precursor [Lysinibacillus fusiformis
           ZC1]
 gi|298725956|gb|EFI66548.1| penicillin-binding protein 5* precursor [Lysinibacillus fusiformis
           ZC1]
          Length = 356

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 80/360 (22%), Positives = 140/360 (38%), Gaps = 37/360 (10%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +R F L +  + +L  + P  S+A       Y +LD  TG ++  +  D     ASLTK+
Sbjct: 2   LRLFRLTLFMIIVLMVMLPQTSLARG--GSGYAVLDGETGRILIGSNSDERLPIASLTKI 59

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
            TA V           L   + IS  A+    S+   + G  +T++  L  L+++S ND 
Sbjct: 60  WTALVAIENSD-----LQEEVVISPKAAMAEGSSIYLQAGEKVTVETLLYGLMLRSGNDA 114

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A+AE +  + + FV+ MN  +   GL+ T FMN  G+    H ++ARD A +      
Sbjct: 115 ATALAEHVGGSVEGFVKLMNERAVIAGLTNTVFMNPSGLHHDEHLSSARDTAEMLRLALQ 174

Query: 180 D--FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG----------------------ADG 215
           +  F +       +   + G  + N +  +    G                      A  
Sbjct: 175 NKTFEKIASTVLYRANTVNGMLWENKHRLLREGSGMAADIDDETEQPVSSLKSATGTAFA 234

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
            KTGFT  +G  +  +  +  Q  I V L   D      V   L +  + + +    +  
Sbjct: 235 GKTGFTKVAGRTLATAFQKDGQICIVVTLNESDD---WNVHRGLSNKVWQDYSLETVVKK 291

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIIN--YNTQMKEAKDKESHFIDFEKITLLKNKI 333
              +  ++        +  ++   +KE +    +   K  +   S FI  E+I     K+
Sbjct: 292 GKYNVNKKLAIRLQEPVRLQLNKEEKEQVRQVLHVSRKRQEAVLSIFIGEERIYATPVKV 351


>gi|302547465|ref|ZP_07299807.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302465083|gb|EFL28176.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 311

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 24/271 (8%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                        LLDT +G  +     D     AS TK+M A VV      K   L   
Sbjct: 35  SPEPPEVSAKGAYLLDTGSGEELMAKGADTKRPIASTTKIMAALVVLE---TKNVDLDKQ 91

Query: 80  ITISKNASEY----PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------CK 129
           +T+ ++  +Y      S +  + G  +T++  L  +++ S  D A+A+A++        +
Sbjct: 92  VTVKEDYRDYVTKSEASTADLQTGDKLTVNQLLYGMMLPSGCDAAMALADTFGTGDTVAE 151

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV-VQHGHYTTARDMAILSWRIKTD--FPQYMH 186
             K FV  MN  +++LGL+ TH+ +  GV    G+Y+T R++A L+ R   +  F + + 
Sbjct: 152 RTKSFVSKMNAKAEDLGLTNTHYDSFDGVSASSGNYSTPREVAELTQRAMKNATFQKVVK 211

Query: 187 YFQIKGL------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
               K          +   + NTN  +G++ GA G+KTG T  +G  +V +A +  ++++
Sbjct: 212 SVSTKQEAPAANGRTRYYSWDNTNRILGSYKGAVGVKTGTTTPAGPCLVFAAKRDGRTVV 271

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
            VIL   D   R   +  +L   +   T  K
Sbjct: 272 GVILN--DAADRYPDAQKMLDFAYDADTQVK 300


>gi|256848334|ref|ZP_05553777.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus coleohominis
           101-4-CHN]
 gi|256714932|gb|EEU29910.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus coleohominis
           101-4-CHN]
          Length = 417

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 114/354 (32%), Gaps = 32/354 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F++I +    + I    +     +      +D  TG ++ +   +     AS TK++T  
Sbjct: 15  FVMIFSCFTAAFISTAQADQTKLEAKAAITMDAQTGQILFQQNANQKLAVASCTKILTLA 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA--- 120
           V+   + + K      I I++  ++                   ++ L        A   
Sbjct: 75  VIEQDIADGKLSWNQKIKINRKVAKTSTDWHFSNVELKAGHRYTVRSLCESMMIVSADGS 134

Query: 121 -VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYT 165
             A+A +   +   F + M   +K  G+      N  G+                  +  
Sbjct: 135 AEALALASAGSTAAFNKKMQAVAKKAGVHDAKIYNMIGLSNGELGSNGIKGVSKKAENAF 194

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-----------GAD 214
           +A+DMA++S  + T +P  ++  +   +E K     + N      +             D
Sbjct: 195 SAKDMALISRYLVTKYPDALNITKATNVEFKVDDKQSYNMLNINGMLPNNGNAPKNGTMD 254

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGAL--DRNTRNKVSASLLSMGFYNKTDRKK 272
           G+KTG T  +G   V + +  ++ LI V+LG    D + + K +  +L            
Sbjct: 255 GLKTGSTDKAGNCFVGTGVFNNRRLITVVLGTDIHDYSKQFKETNKMLEAVQGAYQPVTL 314

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                      N         + V    K+            ++ S  +   K 
Sbjct: 315 -KQPSDLKKLTNQVRVAHGKRKTVKIGLKQTAALWLPKGSKINQVSGQLTLSKG 367


>gi|283832440|ref|ZP_06352181.1| penicillin-binding protein 7 [Citrobacter youngae ATCC 29220]
 gi|291072100|gb|EFE10209.1| penicillin-binding protein 7 [Citrobacter youngae ATCC 29220]
          Length = 315

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 100/258 (38%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D NT  VI  N+PD     AS+TKLMTA VV     
Sbjct: 23  AVAKTATTVAASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARL 82

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                L   I+ +          S  +  S ++  + L L ++ S N  A ++A      
Sbjct: 83  PLNEKLKVDISQTPE---MKGIYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGG 139

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
              F++ MN  +K LG++ T F+   G+    + +TARD+  L      + +        
Sbjct: 140 YNAFIKAMNAKAKALGMTQTRFVEPTGL-SIHNVSTARDLTKLLIASKQYPLIGQLSTTR 198

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  +V   +  ++ +  V++
Sbjct: 199 EDMATFANPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVM 258

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 259 DAFGKYTHFADASRLRTW 276


>gi|26248513|ref|NP_754553.1| D-alanyl-D-alanine endopeptidase [Escherichia coli CFT073]
 gi|227887189|ref|ZP_04004994.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 83972]
 gi|300978674|ref|ZP_07174364.1| beta-lactamase [Escherichia coli MS 45-1]
 gi|301048867|ref|ZP_07195861.1| beta-lactamase [Escherichia coli MS 185-1]
 gi|26108918|gb|AAN81121.1|AE016763_80 Penicillin-binding protein 7 precursor [Escherichia coli CFT073]
 gi|227835539|gb|EEJ46005.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 83972]
 gi|300299322|gb|EFJ55707.1| beta-lactamase [Escherichia coli MS 185-1]
 gi|300409606|gb|EFJ93144.1| beta-lactamase [Escherichia coli MS 45-1]
 gi|307554203|gb|ADN46978.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli ABU 83972]
 gi|315294501|gb|EFU53849.1| beta-lactamase [Escherichia coli MS 153-1]
          Length = 313

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +    +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLAMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|238895697|ref|YP_002920432.1| D-alanyl-D-alanine endopeptidase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548014|dbj|BAH64365.1| D-alanyl-D-alanine endopeptidase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 315

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D  T  +I  + PD     AS+TK+MTA VV     
Sbjct: 23  ALAKTPTAVTASQPEIASGSAMIVDLATKKIIYASQPDLVRPMASITKVMTAMVVLDA-- 80

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                L   +T+   +  E     S  +  S ++  + L L ++ S N  A ++A     
Sbjct: 81  --HLPLDEMLTVDISHTPEMKGIYSRVRLNSQISRRDMLLLALMSSENRAAASLAHHYPG 138

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  ++ LG++ T ++   G+    + +TARD+  L      + +       
Sbjct: 139 GYDAFIRAMNAKAQALGMTHTRYVEPTGL-SVHNVSTARDLTKLLIASEQYPLIGQLSTT 197

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  ++   +   + +  V+
Sbjct: 198 KEETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLIMRTVINQRPVALVV 257

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 258 MDAFGKYTHFADASRLRTW 276


>gi|325523666|gb|EGD01938.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. TJI49]
          Length = 372

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV              
Sbjct: 110 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDSKAPMT---DQI 166

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 167 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 226

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--PQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  +           Q+      +    K 
Sbjct: 227 AKAKALGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPLIRQFSTDRTYEVYTGKR 285

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 286 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFA 345

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 346 DASRLRNW 353


>gi|300715952|ref|YP_003740755.1| penicillin-binding protein 7 (D-alanyl-D-alanine-endopeptidase)
           [Erwinia billingiae Eb661]
 gi|299061788|emb|CAX58904.1| Penicillin-binding protein 7 (D-alanyl-D-alanine-endopeptidase)
           [Erwinia billingiae Eb661]
          Length = 315

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 108/281 (38%), Gaps = 24/281 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------------ETNKLPYYTLLDTNTGHVIAENYP 47
           +  L ++++A++ +    L  A                       ++D NT  VI  ++P
Sbjct: 4   KIRLSLLSLALVFSAQLPLGQAVASSKLADVAPIVQPQIASGSAMIVDLNTNKVIFASHP 63

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D     AS+TKLMT  V          ML   I+   +  E     S  +  S ++  N 
Sbjct: 64  DLVRPMASITKLMTVMVTLDAHLPMDEMLNVDIS---HTPEMRGVYSRVRLNSEISRKNM 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           + L ++ S N  A ++A         F++ MN  +++LG++ TH++   G+    + +TA
Sbjct: 121 MLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAQSLGMTHTHYVEPTGL-SIENVSTA 179

Query: 168 RDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFT 221
           RD+  L      + +            +         + NTN  V          KTGFT
Sbjct: 180 RDLTKLLIATKRYPLIGQLSTTHEDMAVFKSPNYTLPFRNTNHLVYRQDWNIQLTKTGFT 239

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V   +   + +  V++ A  + T    +  L   
Sbjct: 240 NEAGHCLVMRTVINQRPVALVVMDAFGKYTHFADANRLRDW 280


>gi|323352662|ref|ZP_08087632.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           VMC66]
 gi|322121698|gb|EFX93444.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           VMC66]
 gi|324995361|gb|EGC27273.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK678]
 gi|327468942|gb|EGF14414.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK330]
          Length = 455

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 148/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +A L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIAFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|283479035|emb|CAY74951.1| penicillin-binding protein 7 [Erwinia pyrifoliae DSM 12163]
          Length = 316

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 96/251 (38%), Gaps = 12/251 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +           ++D N+  VI E++PD     AS+TKLMT  V           L  
Sbjct: 35  SSAARPAIASGSAMIVDLNSNKVIYESHPDRVRPIASITKLMTVMVTLDA----HLPLDE 90

Query: 79  PITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + +   +  +     S  +  S ++  N + L ++ S N  A ++A         F++ 
Sbjct: 91  MLKVDISHTPQMRGIYSRVRLNSELSRKNMMLLALMSSENRAAASLAHHYPGGYDAFIRA 150

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN  ++ LG+S T ++   G+    + +TARD++ L      + +               
Sbjct: 151 MNAKARALGMSHTRYVEPTGL-SIDNVSTARDLSKLLQATKRYPLIGQLSTTHEDMASFR 209

Query: 193 LEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  + NTN  V          KTGFT  +G  +V   +   + +  V+L A  + T
Sbjct: 210 SPNYTLPFRNTNHLVYRPDWNIQLTKTGFTNEAGHCLVMRTVINQRPVSLVVLDAFGKYT 269

Query: 252 RNKVSASLLSM 262
               ++ L   
Sbjct: 270 HFADASRLRQW 280


>gi|319942241|ref|ZP_08016556.1| hypothetical protein HMPREF9464_01775 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804114|gb|EFW01014.1| hypothetical protein HMPREF9464_01775 [Sutterella wadsworthensis
           3_1_45B]
          Length = 372

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 7/243 (2%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                      +D +TG  +     D     AS+TKLMTA V+          L   + I
Sbjct: 114 PLQLGSSVAYAMDQDTGEELVVKNADVELPIASVTKLMTALVIAESD----VDLDEKVRI 169

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           ++       ++S    G  +T ++ LK  ++ S N  A A+A +     K FV  MN  +
Sbjct: 170 TREDYVRSTAHSKLISGMRLTRESLLKAALMSSDNRAAAALARTYPGGRKAFVAKMNERA 229

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP- 201
             +G++ + F +  G+    H T      +++   +    +      +  +    ++   
Sbjct: 230 AAIGMTNSFFADPTGLDNRNHSTARDLGKLVAAVYQHQEIRDASTTSMARISTGRRQVNL 289

Query: 202 -NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             TN  +G      G  KTGFT A+G  +V  +  G++ L+ V+L + +   R     ++
Sbjct: 290 ATTNRLIGDPSWRIGIQKTGFTTAAGRCMVVQSDVGERRLVMVVLDSPNNAQRADDMRTM 349

Query: 260 LSM 262
            + 
Sbjct: 350 RAY 352


>gi|325688308|gb|EGD30327.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK72]
          Length = 455

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGVVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|302190851|ref|ZP_07267105.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus iners AB-1]
          Length = 425

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/344 (16%), Positives = 114/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +   K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAINAGKISWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A D+ IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDIGILIKHLLLEFPQVLD 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRISKLNFPDGHNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 298 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 357

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|238753350|ref|ZP_04614713.1| D-alanyl-D-alanine endopeptidase [Yersinia ruckeri ATCC 29473]
 gi|238708303|gb|EEQ00658.1| D-alanyl-D-alanine endopeptidase [Yersinia ruckeri ATCC 29473]
          Length = 311

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +A  + +                ++D  T  V+  N PDH    AS+TKLMTA V     
Sbjct: 26  LATTNVVVKQQVAPLELASGSAMVVDLKTNKVLYSNNPDHVVPIASITKLMTAMVTLDA- 84

Query: 70  KEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
              K  L   I++  + ++      S  K  S +   + L L ++ S N  A ++A    
Sbjct: 85  ---KLPLDEVISVDIHQTKELKGVFSRVKVNSEINRKDMLLLALMSSENRAAASLAHHYP 141

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YMHY 187
                F+  MN  +K+LG++ THF+   G+    + +TARD++ L    K       +  
Sbjct: 142 GGYSAFITAMNVKAKSLGMTHTHFVEPTGL-SINNVSTARDLSKLLLATKQYPLIGQLST 200

Query: 188 FQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              K    +   Y     NTN  V          KTGFT  +G  +V   +  ++ +  V
Sbjct: 201 STEKMATFRNPSYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLVMRTVINNRPVALV 260

Query: 243 ILGALDRNTRNKVSASLLSM 262
           +L A  + T    +  L S 
Sbjct: 261 VLDAFGKYTHFADANRLRSW 280


>gi|254251960|ref|ZP_04945278.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia dolosa AUO158]
 gi|124894569|gb|EAY68449.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia dolosa AUO158]
          Length = 384

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV              
Sbjct: 122 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDSKLPMT---DQL 178

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 179 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 238

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--PQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  L           ++      +    K 
Sbjct: 239 AKAKALGMADTHFENSTGL-SSSNVSSARDLVKLVNAAYQYPLIRKFSTDRTYEVYTGKR 297

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 298 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPVVMVLLDSFGKYSRFA 357

Query: 255 VSASLLSM 262
            +A L + 
Sbjct: 358 DAARLRNW 365


>gi|332093252|gb|EGI98312.1| D-alanyl-D-alanine endopeptidase [Shigella boydii 5216-82]
          Length = 310

 Score =  125 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|254479748|ref|ZP_05093030.1| Penicillin-binding protein 5, C-terminal domain [Carboxydibrachium
           pacificum DSM 12653]
 gi|214034315|gb|EEB75107.1| Penicillin-binding protein 5, C-terminal domain [Carboxydibrachium
           pacificum DSM 12653]
          Length = 334

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           S+N ++   ++     G  +TL+  L  L+++SAND A+AIAE +  + + F + MN  +
Sbjct: 1   SENVTKIEGNSIFLSPGEQLTLEQLLYALMLESANDAAIAIAEYIGGSVENFAKMMNEKA 60

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP--------QYMHYFQIKGLE 194
           + +G   +HF+N +G+    HY+T  DMA ++     +           Y      K  +
Sbjct: 61  REIGAYNSHFVNPNGLPDENHYSTPYDMAQIARYAMQNAEFRKIVSTLHYQIPPTNKFDK 120

Query: 195 IKGKKYPNT--NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            +     N     +   + GADG+KTG+T A+G  +VASA +    LI+VI+G    N  
Sbjct: 121 PRDLWISNRLLKPSRFHYEGADGVKTGYTVAAGQVLVASATRDGHRLISVIMGDEGINI- 179

Query: 253 NKVSASLLSMGFYNKTDRKKINY--IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
              +  LL  GF N +  K      +I          ++P I+++    +      N+  
Sbjct: 180 WTDTIKLLDYGFQNFSLVKVTQKDEVITSIELGKGGFKLPLIAQKDFYYEVPKGKENSIK 239

Query: 311 KEAKDKESHFIDFEKITLLK 330
            E   KE      +K  +L 
Sbjct: 240 TEVVLKEDIKAPIQKGEVLG 259


>gi|24372585|ref|NP_716627.1| D-alanyl-D-alanine endopeptidase [Shewanella oneidensis MR-1]
 gi|24346606|gb|AAN54072.1|AE015544_5 D-alanyl-D-alanine endopeptidase [Shewanella oneidensis MR-1]
          Length = 321

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 102/276 (36%), Gaps = 10/276 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D  T  ++  + PD     AS+TKLMTA V           LT  I  +
Sbjct: 50  QEVAANSALVVDLKTNEILYSSNPDAVRPIASVTKLMTAMVTLDAKLPMDEKLTINIKDT 109

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K         S  + GS ++    L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 110 KE---MRGVYSRVRIGSEISRKEMLLLTLMSSENRAAASLAHHYPGGHKAFIKAMNAKAK 166

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
            LG+  + F+   G+      +    + +L           +   + K +     KY   
Sbjct: 167 ALGMKNSRFVEPTGLSAKNVSSARDLVVLLKASQGYPMLGQLSSTEKKTVTFGKPKYSLD 226

Query: 201 -PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             NTN  V          KTGFT A+G  +V       + +  V+L A  + T    +  
Sbjct: 227 FRNTNRLVYKDNWDIHLTKTGFTNAAGHCLVMRTEMAKRKVAFVVLDAKGKYTHMADANR 286

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           L +           I    K + +Q    ++  +SE
Sbjct: 287 LRNWL--ETGKVTPIPADAKQYKKQRSQQQLAKVSE 320


>gi|324990581|gb|EGC22517.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK353]
          Length = 455

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|117618941|ref|YP_856986.1| D-alanyl-D-alanine carboxypeptidase family protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560348|gb|ABK37296.1| D-alanyl-D-alanine carboxypeptidase family protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 306

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 109/283 (38%), Gaps = 25/283 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPY-------------------YTLLDTNTGHVI 42
           R FL ++  A L  +    + A                          + + +  TG V+
Sbjct: 4   RPFLTLLLGAFLVPVSMESAQANPFSAQSHSPNSFLEQRNDLALSSAAFVVANPRTGEVL 63

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
           +E   +     AS+TKLMTA VV    +    MLT  +    +      + S    GS +
Sbjct: 64  SERNANRVMPIASITKLMTALVVLDANQRLSEMLTVTMA---DVDRLKGTGSRLAVGSRL 120

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +  + L + ++ S N  A A+A +    ++ F++ MN  ++ LG+ +T F ++ G+    
Sbjct: 121 SRADMLHIALMSSENRAASALARNYPGGQRAFIEAMNAKARMLGMWSTQFSDSTGLTPRN 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGM---KTG 219
             +      +++        +     + + +    ++    N       G+  +   KTG
Sbjct: 181 VSSAHDLAKLVAAASTYPLIRQYSSTEERMVRNGKRQLHYLNSNRLVREGSWPISLSKTG 240

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +   +G  +V +     + +I V+L A   N R   +  + S 
Sbjct: 241 YIREAGRCLVMATQINREPVIMVLLNADTPNARVADAKRIKSW 283


>gi|327458687|gb|EGF05035.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1057]
          Length = 455

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQTINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|325124211|gb|ADY83734.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 335

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 8/251 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               +   +       ++D  TG V+     +     AS+TK+MTA V           +
Sbjct: 80  TSGYNAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKVMTAVVTADARLNMSEEI 139

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T   I    +    S+ST + G  M     L   ++KS N  A A+A +       FV 
Sbjct: 140 -TLEQIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVA 198

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG+S+TH+  + G+    + ++ARD+ IL     + +     +      +  
Sbjct: 199 AMNAKARALGMSSTHYYESTGL-DPRNVSSARDLGILVS-TASQYGLIRQFSTTPTYDFN 256

Query: 197 GK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 K  NTN  V       +  KTG+   +G  +V       +  + V+LG      
Sbjct: 257 LGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQA 316

Query: 252 RNKVSASLLSM 262
           RN  + +LL  
Sbjct: 317 RNNDATNLLGW 327


>gi|307270557|ref|ZP_07551855.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           TX4248]
 gi|306513138|gb|EFM81772.1| serine-type D-Ala-D-Ala carboxypeptidase [Enterococcus faecalis
           TX4248]
          Length = 493

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/388 (18%), Positives = 141/388 (36%), Gaps = 64/388 (16%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKL---------------------PYYTLLDTNTGHVIA 43
             +  + ++ +   F +                                ++D ++G ++ 
Sbjct: 15  FTLFLLGLVVSCGAFFAQPTVTHAEEDITAIAKKMGTTLKADGIPKAAIVVDADSGEILW 74

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
              PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +       SN+    G
Sbjct: 75  SQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVDISKIYAISNNKITLG 134

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHG- 157
               +   LK++ V S+N   + +A  +   +   FV  MN  +  LG++ T + N  G 
Sbjct: 135 VAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAAELGMTNTTYYNCSGA 194

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + +TARD+A L++    ++P+ +        +        +
Sbjct: 195 QASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEITNKPVVKTMVGTPYEE 254

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            +   N++       + G DG+KTG +   GFN +A+  Q D  LI VILG         
Sbjct: 255 TFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQEDFRLIEVILGVGNWQNQDG 314

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SNEVPNISEEVCTTQKE 302
              R+    +LL   +     +K ++   +    + +         +P  S+        
Sbjct: 315 EYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYGVIPKGSQPTFKLVAG 374

Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLK 330
            +  +T +       +          +K
Sbjct: 375 QVQVDTPL--TLLNSTVQAPKVAYQEVK 400


>gi|302867861|ref|YP_003836498.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570720|gb|ADL46922.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Micromonospora
           aurantiaca ATCC 27029]
          Length = 426

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 13/263 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             + P  S         + + D ++G V+    P     PAS+ KL+ A  +   L   +
Sbjct: 74  LVVPPASSAPPAVTATSWVVADLDSGAVLGGCGPHEYGVPASVQKLLLAATMLPRLDPHR 133

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTE 131
                 +T    A E   S     +G    ++     L+++S N+ A A+A         
Sbjct: 134 ---EVTVTAGDLAVEPGSSAVGLVEGGRYQIETIWLGLLLRSGNEAANALARLGGGPDGL 190

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------ 185
              V+ MN  +  LG   TH +   G+   G +T+A D+A+++     D           
Sbjct: 191 AGGVRAMNEEAHRLGARQTHAVTPSGLDGPGQFTSAYDLALIARACFADPAFRRYAATRI 250

Query: 186 -HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                      KG    N N  +  + GA G KTGFT  +    V +A +G + L+  +L
Sbjct: 251 AQIPAQPAQRAKGFAISNDNMLLDHYPGALGGKTGFTDLARHTYVGAAERGGRRLVVTLL 310

Query: 245 GALDRNTR-NKVSASLLSMGFYN 266
           GA     R  +  A+LL  GF  
Sbjct: 311 GAEVTTQRGWQQGAALLDWGFAQ 333


>gi|330831299|ref|YP_004394251.1| D-alanyl-D-alanine carboxypeptidase; penicillin binding protein 7
           [Aeromonas veronii B565]
 gi|328806435|gb|AEB51634.1| D-alanyl-D-alanine carboxypeptidase; penicillin binding protein 7
           [Aeromonas veronii B565]
          Length = 259

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 12/261 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + + +            +     ++D  TG  + +         ASLTKLMTA VV   
Sbjct: 1   MLGLPAVSAAPNPAKLEVRSSSALVVDVKTGKTLYQKNATKVRPIASLTKLMTALVVLDA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESL 127
            +     L   IT+ KN  +      +  +  + +T  +AL L ++ S N +A A+A   
Sbjct: 61  KQ----NLNQTITVDKNDLDRVKHTHSRIRMGTKVTRRDALHLALMSSENRMASALARHY 116

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFP 182
                 FV+ MNN ++ LG+  THF ++ G+    + +TA+D+  L        +   F 
Sbjct: 117 PGGRSAFVRAMNNKARQLGMRNTHFYDSTGL-STRNVSTAQDLGKLAAAAYRQPLIRQFT 175

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIA 241
           Q  +             + NTN  V          KTGFT  +G  +V  A    + L  
Sbjct: 176 QDENREMRFSAPAYSLMFNNTNPLVKNPDWDVRLSKTGFTDEAGRCLVMRAKPDSRELAI 235

Query: 242 VILGALDRNTRNKVSASLLSM 262
           V+L ++ + T    +  +   
Sbjct: 236 VLLNSVGKRTPIGDANRIRKW 256


>gi|213609716|ref|ZP_03369542.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 267

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 5/225 (2%)

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND  VA+A+    ++  FV  MN+    LGL  THF   HG+   G Y++ARDMA+
Sbjct: 1   MQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMAL 60

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVAS 231
           +   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+VAS
Sbjct: 61  IGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVAS 120

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSN 287
           A +G   LI+ ++G      R   S  LL+ GF        +        +  +  N   
Sbjct: 121 ATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTDR 180

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               + ++V  T       + +     +        +K  ++   
Sbjct: 181 ASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 225


>gi|332978541|gb|EGK15250.1| D-alanyl-D-alanine endopeptidase PbpG [Psychrobacter sp.
           1501(2011)]
          Length = 343

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 96/251 (38%), Gaps = 21/251 (8%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF--LKEKKAMLTTPI 80
             +       +LD  TG  + E   D     AS+TK+MTA VV        ++  L    
Sbjct: 92  PISTGSRGVIVLDVATGKPLYEKNADIARPIASITKIMTAMVVLDAGLDMREEIKLDPED 151

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +         ++S  K G  M     L + ++KS N  A ++A +       F++ MN 
Sbjct: 152 FVGPKR-----ASSRLKSGDRMNRAELLLMALMKSENPAAKSLARNYPGGYDAFMRAMNA 206

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +++LG+++  F +  G+ +    +      ++       +     +   K  +     Y
Sbjct: 207 KARSLGMNSAFFGDPTGLDKRNVASPMDLAKMVQA--AGQYEVIRRFSTTKNYDFYVANY 264

Query: 201 PNTNWAV-----------GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            + N              GT+      KTGF   +G  +V      ++  I VILGA   
Sbjct: 265 TDGNRTYPASNTSKLVRGGTYP-IGISKTGFINEAGQCVVMETQFNNRPAIIVILGADSS 323

Query: 250 NTRNKVSASLL 260
           NTR   + ++L
Sbjct: 324 NTRWNDAENIL 334


>gi|270260850|ref|ZP_06189123.1| putative endopeptidase [Serratia odorifera 4Rx13]
 gi|270044334|gb|EFA17425.1| putative endopeptidase [Serratia odorifera 4Rx13]
          Length = 309

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 94/252 (37%), Gaps = 10/252 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               +           ++D  T  V+    PD     AS+TKLMTA V          ML
Sbjct: 32  AAAHAAQPELASGSAMVVDMQTHKVMYARNPDEVVPIASITKLMTAMVTLDAHLPLDEML 91

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +  I  +          S  +  S +T  + L L ++ S N  A ++A         F++
Sbjct: 92  SVDIHQTPE---MKGVYSRVRLNSEITRKDMLLLALMSSENRAAASLAHHYPGGYGAFIK 148

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIK 191
            MN  ++ LG++ TH++   G+    + +TARD+  L      + +              
Sbjct: 149 AMNAKARALGMTNTHYVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTTERMASF 207

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                   + NTN  V          KTGFT  +G  +    + G +S+  V+L A  + 
Sbjct: 208 KDPNYTLPFRNTNHLVYNPKWNIQLTKTGFTNEAGHCLAMRTMIGSRSVSLVVLDAFGKY 267

Query: 251 TRNKVSASLLSM 262
           T    +  L + 
Sbjct: 268 THFADANRLRTW 279


>gi|167813984|ref|ZP_02445664.1| penicillin-binding protein 6 [Burkholderia pseudomallei 91]
          Length = 306

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 13/251 (5%)

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
               +    +++ + +  +I++S ND A+A+AE +  +E +FV  MN  ++ LG+  THF
Sbjct: 16  RMFIEANKPVSVHDLVYGMIIQSGNDAAIALAELVGGSEAQFVNMMNAEAQRLGMKNTHF 75

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            + +G+    HYTTA D+A LS  +  D+P Y + F +K       K PN N  +     
Sbjct: 76  ADVNGMPDPNHYTTAGDLAKLSTHLIRDYPDYYNIFSVKEFTYNNIKQPNRNRLLWLDPT 135

Query: 213 ADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            DG+KTG T A+G+ ++ASA +         + L+ V++G    + R + S  +L+ G+ 
Sbjct: 136 VDGLKTGHTQAAGYCLIASAKRALPGAADATRRLVTVMMGETKESDRVQDSMKMLNYGYT 195

Query: 266 NKTDRKKINYIIKD----FYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESH 319
                +             Y+   +N    + ++  +   +        ++       + 
Sbjct: 196 AFDSVRLYKASQPIDTPRVYKGKSNNVQVGVKKDQFITVPRGLADKVKPEVALNAPLIAP 255

Query: 320 FIDFEKITLLK 330
             D + +  +K
Sbjct: 256 LADGQVVGSVK 266


>gi|307719458|ref|YP_003874990.1| D-alanyl-D-alanine carboxypeptidase A [Spirochaeta thermophila DSM
           6192]
 gi|306533183|gb|ADN02717.1| putative D-alanyl-D-alanine carboxypeptidase A [Spirochaeta
           thermophila DSM 6192]
          Length = 387

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 14/313 (4%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYP 90
           +  T  V+ E   D P   ASLTKL+TAY+V   ++        P+ +     +      
Sbjct: 31  EPTTRTVLFEKQADLPHPAASLTKLVTAYLVLQAMEHGLLREDLPLPVPSALARIPFPPD 90

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S +    G+T+T    L L +V SAND A A+A  L      F + MN   ++LG S  
Sbjct: 91  ASLAGLTPGTTLTPAQLLSLTLVYSANDAACALALLLAPDIPTFARRMNTLVQSLGYSHL 150

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
            F    G+  H   T        +  +         Y   + + I G+ Y N N  +G +
Sbjct: 151 SFEEPSGLSPHNTITAREIALFAADYLDRFPSAPARYHSPRAVTIGGRTYLNRNTLLGRY 210

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDRNTRNKVSASLLSMGF 264
            G +G+KTG+   SGF+IVA A +G  SLIAV+LG            R+  +A+LL  GF
Sbjct: 211 PGLEGLKTGYLEESGFHIVAYARRGPTSLIAVLLGIQAPSYWEGMQERDHQAAALLDYGF 270

Query: 265 YNKTDRKKINYIIKDF----YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                 +     I+        Q      P     V   + +I   + ++++  ++ +  
Sbjct: 271 DTYLTTEAPLTGIRPVRIWGGTQPFLTPRPARPLRVTLARTDIPRLSVEVEQVSERWAPL 330

Query: 321 IDFEKITLLKNKI 333
              E++  ++  +
Sbjct: 331 HPGERLGTVRLLL 343


>gi|259501428|ref|ZP_05744330.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus iners DSM
           13335]
 gi|259167177|gb|EEW51672.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus iners DSM
           13335]
          Length = 429

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 114/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +   K    T +  S+
Sbjct: 63  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAINAGKISWQTKVMPSR 122

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +         +     ++ L      +SAN  A+ +A ++  + KKFV  M  
Sbjct: 123 EAIAVSKNPEYSNVPLQLGHQYTIRQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 182

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 183 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDMGILIKHLLLEFPQVLD 242

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 243 TTRISKLNFPDGHNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 301

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 302 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 361

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 362 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 405


>gi|15802684|ref|NP_288711.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 EDL933]
 gi|15832275|ref|NP_311048.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|74312658|ref|YP_311077.1| D-alanyl-D-alanine endopeptidase [Shigella sonnei Ss046]
 gi|157161616|ref|YP_001458934.1| D-alanyl-D-alanine endopeptidase [Escherichia coli HS]
 gi|168764225|ref|ZP_02789232.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4501]
 gi|168771600|ref|ZP_02796607.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4486]
 gi|168777288|ref|ZP_02802295.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4196]
 gi|168783704|ref|ZP_02808711.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4076]
 gi|170019548|ref|YP_001724502.1| D-alanyl-D-alanine endopeptidase [Escherichia coli ATCC 8739]
 gi|188025021|ref|ZP_02775528.2| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4113]
 gi|188491726|ref|ZP_02998996.1| penicillin-binding protein 7 [Escherichia coli 53638]
 gi|189402480|ref|ZP_02782715.2| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4401]
 gi|189405204|ref|ZP_02813943.2| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC869]
 gi|189406078|ref|ZP_02826192.2| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC508]
 gi|193062314|ref|ZP_03043409.1| penicillin-binding protein 7 [Escherichia coli E22]
 gi|194427101|ref|ZP_03059652.1| penicillin-binding protein 7 [Escherichia coli B171]
 gi|194431501|ref|ZP_03063793.1| penicillin-binding protein 7 [Shigella dysenteriae 1012]
 gi|208809227|ref|ZP_03251564.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4206]
 gi|208813477|ref|ZP_03254806.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4045]
 gi|208818552|ref|ZP_03258872.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4042]
 gi|209396832|ref|YP_002271537.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4115]
 gi|217327143|ref|ZP_03443226.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str.
           TW14588]
 gi|261223412|ref|ZP_05937693.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259038|ref|ZP_05951571.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283382|ref|YP_003500200.1| Penicillin-binding protein 7 [Escherichia coli O55:H7 str. CB9615]
 gi|293405603|ref|ZP_06649595.1| pbpG [Escherichia coli FVEC1412]
 gi|293410496|ref|ZP_06654072.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293446485|ref|ZP_06662907.1| D-alanyl-D-alanine endopeptidase [Escherichia coli B088]
 gi|298381285|ref|ZP_06990884.1| pbpG [Escherichia coli FVEC1302]
 gi|300901247|ref|ZP_07119348.1| beta-lactamase [Escherichia coli MS 198-1]
 gi|300948233|ref|ZP_07162354.1| beta-lactamase [Escherichia coli MS 116-1]
 gi|331663631|ref|ZP_08364541.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA143]
 gi|12516442|gb|AAG57266.1|AE005445_3 penicillin-binding protein 7 [Escherichia coli O157:H7 str. EDL933]
 gi|13362490|dbj|BAB36444.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. Sakai]
 gi|73856135|gb|AAZ88842.1| penicillin-binding protein 7 [Shigella sonnei Ss046]
 gi|157067296|gb|ABV06551.1| penicillin-binding protein 7 [Escherichia coli HS]
 gi|169754476|gb|ACA77175.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Escherichia
           coli ATCC 8739]
 gi|187767413|gb|EDU31257.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4196]
 gi|188015308|gb|EDU53430.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4113]
 gi|188486925|gb|EDU62028.1| penicillin-binding protein 7 [Escherichia coli 53638]
 gi|188999045|gb|EDU68031.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4076]
 gi|189355332|gb|EDU73751.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4401]
 gi|189359688|gb|EDU78107.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4486]
 gi|189365744|gb|EDU84160.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4501]
 gi|189371364|gb|EDU89780.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC869]
 gi|189376656|gb|EDU95072.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC508]
 gi|192931980|gb|EDV84579.1| penicillin-binding protein 7 [Escherichia coli E22]
 gi|194414722|gb|EDX30993.1| penicillin-binding protein 7 [Escherichia coli B171]
 gi|194420326|gb|EDX36403.1| penicillin-binding protein 7 [Shigella dysenteriae 1012]
 gi|208729028|gb|EDZ78629.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4206]
 gi|208734754|gb|EDZ83441.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4045]
 gi|208738675|gb|EDZ86357.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4042]
 gi|209158232|gb|ACI35665.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str. EC4115]
 gi|209766398|gb|ACI81511.1| penicillin-binding protein 7 [Escherichia coli]
 gi|209766400|gb|ACI81512.1| penicillin-binding protein 7 [Escherichia coli]
 gi|209766402|gb|ACI81513.1| penicillin-binding protein 7 [Escherichia coli]
 gi|209766404|gb|ACI81514.1| penicillin-binding protein 7 [Escherichia coli]
 gi|209766406|gb|ACI81515.1| penicillin-binding protein 7 [Escherichia coli]
 gi|217319510|gb|EEC27935.1| penicillin-binding protein 7 [Escherichia coli O157:H7 str.
           TW14588]
 gi|284922120|emb|CBG35201.1| penicillin-binding protein 7 [Escherichia coli 042]
 gi|290763255|gb|ADD57216.1| Penicillin-binding protein 7 [Escherichia coli O55:H7 str. CB9615]
 gi|291323315|gb|EFE62743.1| D-alanyl-D-alanine endopeptidase [Escherichia coli B088]
 gi|291427811|gb|EFF00838.1| pbpG [Escherichia coli FVEC1412]
 gi|291470964|gb|EFF13448.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298278727|gb|EFI20241.1| pbpG [Escherichia coli FVEC1302]
 gi|300355321|gb|EFJ71191.1| beta-lactamase [Escherichia coli MS 198-1]
 gi|300452239|gb|EFK15859.1| beta-lactamase [Escherichia coli MS 116-1]
 gi|315061445|gb|ADT75772.1| D-alanyl-D-alanine endopeptidase [Escherichia coli W]
 gi|320178919|gb|EFW53882.1| Murein-DD-endopeptidase [Shigella boydii ATCC 9905]
 gi|320192249|gb|EFW66894.1| Murein-DD-endopeptidase [Escherichia coli O157:H7 str. EC1212]
 gi|320199729|gb|EFW74318.1| Murein-DD-endopeptidase [Escherichia coli EC4100B]
 gi|320657567|gb|EFX25365.1| D-alanyl-D-alanine endopeptidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|323936749|gb|EGB33034.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1520]
 gi|324015921|gb|EGB85140.1| beta-lactamase [Escherichia coli MS 117-3]
 gi|324118025|gb|EGC11924.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli E1167]
 gi|326339477|gb|EGD63288.1| Murein-DD-endopeptidase [Escherichia coli O157:H7 str. 1125]
 gi|326343939|gb|EGD67700.1| Murein-DD-endopeptidase [Escherichia coli O157:H7 str. 1044]
 gi|331059430|gb|EGI31407.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA143]
          Length = 313

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|315505737|ref|YP_004084624.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Micromonospora
           sp. L5]
 gi|315412356|gb|ADU10473.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Micromonospora
           sp. L5]
          Length = 419

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 13/263 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             + P  S         + + D ++G V+    P     PAS+ KL+ A  +   L   +
Sbjct: 67  LVVPPASSAPPAVTATSWVVADLDSGAVLGGCGPHEYGVPASVQKLLLAATMLPRLDPHR 126

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTE 131
                 +T    A E   S     +G    ++     L+++S N+ A A+A         
Sbjct: 127 ---EVTVTAGDLAVEPGSSAVGLVEGGRYRIETIWLGLLLRSGNEAANALARLGGGPDGL 183

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------ 185
              V+ MN  +  LG   TH +   G+   G +T+A D+A+++     D           
Sbjct: 184 AGGVRAMNEEAHRLGARQTHAVTPSGLDGPGQFTSAYDLALIARACFADPAFRRYATTRI 243

Query: 186 -HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                      KG    N N  +  + GA G KTGFT  +    V +A +G + L+  +L
Sbjct: 244 AQIPAQPAQRAKGFAISNDNMLLDHYPGALGGKTGFTDLARHTYVGAAERGGRRLVVTLL 303

Query: 245 GALDRNTR-NKVSASLLSMGFYN 266
           GA     R  +  A+LL  GF  
Sbjct: 304 GAEVTTQRGWQQGAALLDWGFAQ 326


>gi|169630760|ref|YP_001704409.1| penicillin-binding protein DacB1 [Mycobacterium abscessus ATCC
           19977]
 gi|169242727|emb|CAM63755.1| Probable penicillin-binding protein DacB1 [Mycobacterium abscessus]
          Length = 429

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 98/266 (36%), Gaps = 19/266 (7%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +        + + D NTG+V+A   P     PAS+ K++ A    +     
Sbjct: 99  VITPDGAGPVPNDISAESWLIADLNTGNVVAAKDPHARHRPASVIKVLVAMEAINN---- 154

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L   +  ++  +    +      G T T+   L  L++ S ND A A+A  L   ++
Sbjct: 155 -LNLNQAVVGTQEDANSEGTRVGVDVGGTYTVRQLLTGLLMNSGNDAAHALAVQLGGMDE 213

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK- 191
              + +N+ ++ LG   T      G+   G  T+A D+ +       D          K 
Sbjct: 214 TVAK-INDMAQKLGARDTRAATPSGLDGPGMSTSAYDLGLFYKYAFADPTFADLVSAPKA 272

Query: 192 -----------GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                        +    +  N N  +  + GA G KTG+T  +    V +A +  + L+
Sbjct: 273 TFPGHPAKPGERDDHPAYEMTNDNKLLYNYPGALGGKTGYTDDAQQTFVGAAERDGRRLV 332

Query: 241 AVIL-GALDRNTRNKVSASLLSMGFY 265
             +L G        + +A LL  GF 
Sbjct: 333 VTMLRGTRLPIAPWEQAAHLLDYGFS 358


>gi|289422674|ref|ZP_06424514.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           anaerobius 653-L]
 gi|289156853|gb|EFD05478.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptostreptococcus
           anaerobius 653-L]
          Length = 423

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 79/358 (22%), Positives = 146/358 (40%), Gaps = 30/358 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
            V I++++L  + P              +  ++DT +  ++ E     P   ASL+K+MT
Sbjct: 13  FVSISLSLLIGLSPRSMAYTRFSDRNSRHAIVVDTKSDRIVYEKDSLTPTAMASLSKMMT 72

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             + F  LK +K  +   + I  +      +N    +G  + LD  L  +++ SAND A+
Sbjct: 73  LLITFDDLKARKVSMHDQVKILASDVNRDGTNMKLNEGDIVGLDVLLDSMMIISANDSAL 132

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----------QHGHYTTARDMA 171
           AIA  +    K FV+ MN+ +  +G++ T F N +G+            + + T ARD+A
Sbjct: 133 AIARHVGGDYKTFVKRMNDKASEIGMTKTVFYNPNGLPIYGEKYGKKITYENTTCARDVA 192

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKY---PNTNWAVGTFLGADGMKTGFTCASGFNI 228
           ILS  +  ++ + +     K   +  KK     NTN  +  F  +DG+KTGFT  +G+ +
Sbjct: 193 ILSKFLYDNYEKELTNITSKKRFVNTKKQIDEENTNPILPLFKESDGLKTGFTDKAGYCL 252

Query: 229 VASAIQG-------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             S+          D  LI V +GA  +  R   + + L         +           
Sbjct: 253 AYSSRTNRGGENDVDNRLIGVSMGAPSKEARRDSAYNTLDFITQKYKTKNLYKKGEVLAS 312

Query: 282 QQNLSNEVPNI--SEEVCTTQKEIINYNTQMKEA-----KDKESHFIDFEKITLLKNK 332
           +        ++   E +   +++   +  ++        KD +      + I    N 
Sbjct: 313 KNINGMIKTDLCPDENISIIKRQDEKFKQRLVYKRVNILKDYDKPIAQMQLIDAWGNI 370


>gi|293610046|ref|ZP_06692347.1| D-alanyl-D-alanine endopeptidase [Acinetobacter sp. SH024]
 gi|292827278|gb|EFF85642.1| D-alanyl-D-alanine endopeptidase [Acinetobacter sp. SH024]
          Length = 348

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 8/251 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               +   +       ++D  TG V+     +     AS+TK+MTA V           +
Sbjct: 93  TSGYNAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKVMTAVVTADARLNMSEEI 152

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T   I    +    S+ST + G  M     L   ++KS N  A A+A +       FV 
Sbjct: 153 -TLEQIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVA 211

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG+++TH+  + G+    + ++ARD+ IL     + +     +      +  
Sbjct: 212 AMNAKARALGMNSTHYYESTGL-DPRNVSSARDLGILVS-TASQYGLIRQFSTTPTYDFN 269

Query: 197 GK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 K  NTN  V       +  KTG+   +G  +V       +  + V+LG      
Sbjct: 270 LGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQA 329

Query: 252 RNKVSASLLSM 262
           RN  + +LL  
Sbjct: 330 RNNDATNLLGW 340


>gi|257091370|ref|ZP_05585731.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis CH188]
 gi|257417972|ref|ZP_05594966.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis T11]
 gi|257000182|gb|EEU86702.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis CH188]
 gi|257159800|gb|EEU89760.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis T11]
          Length = 475

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 342 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|312875038|ref|ZP_07735056.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           2053A-b]
 gi|311089433|gb|EFQ47859.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners LEAF
           2053A-b]
          Length = 425

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 115/344 (33%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +   K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAINAGKISWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +              T+    +  +++SAN  A+ +A ++  + KKFV  M  
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIKQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSTKNADAENELSASDMGILIKHLLLEFPQVLD 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L         K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRISKLNFPDGHNTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 298 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 357

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|152971112|ref|YP_001336221.1| D-alanyl-D-alanine endopeptidase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150955961|gb|ABR77991.1| D-alanyl-D-alanine endopeptidase; penicillin-binding proteins 7 and
           8 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 316

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D  T  +I  + PD     AS+TK+MTA VV     
Sbjct: 24  ALAKTPTAVTASQPEIASGSAMIVDLATKKIIYASQPDLVRPMASITKVMTAMVVLDA-- 81

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                L   +T+   +  E     S  +  S ++  + L L ++ S N  A ++A     
Sbjct: 82  --HLPLDEMLTVDISHTPEMKGIYSRVRLNSQISRRDMLLLALMSSENRAAASLAHHYPG 139

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  ++ LG++ T ++   G+    + +TARD+  L      + +       
Sbjct: 140 GYDAFIRAMNAKAQALGMTHTRYVEPTGL-SVHNVSTARDLTKLLIASEQYPLIGQLSTT 198

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  ++   +   + +  V+
Sbjct: 199 KEETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLIMRTVINQRPVALVV 258

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 259 MDAFGKYTHFADASRLRTW 277


>gi|28379575|ref|NP_786467.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           WCFS1]
 gi|28272415|emb|CAD65338.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           WCFS1]
          Length = 444

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 138/377 (36%), Gaps = 45/377 (11%)

Query: 1   MRQFLVIIAMAMLSN----------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           +++ ++ +  A+  +          +    +   +        +D +TG ++ +     P
Sbjct: 7   LKKVMIALVAAVTFSTGGLGIAGADLQAQAASTPSISAKAAIAVDASTGQILYDKNSSKP 66

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS+TK+++ Y+V   + E K      I++SK  ++   +          T   +++ 
Sbjct: 67  MAIASMTKMLSTYLVLKAIHEGKLSWNQKISVSKAVAKMSQNTEYANVPLLSTKTYSVRQ 126

Query: 111 LIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----- 161
           L       SAN    A+ +++  T  KFV  M  T+K+ G++    +NA G+        
Sbjct: 127 LYNATEIYSANAAITALGDAVAGTPHKFVSLMRKTAKSWGITDATIINASGLTNKEVGST 186

Query: 162 ----------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA 206
                      +  +A+D+A ++ ++ +D+P+ +    I     +       K  N N+ 
Sbjct: 187 IGYSNVAASAENEMSAQDVATVAQKLLSDYPEVLKTSSIAHAWFEKGTSSATKMDNRNYM 246

Query: 207 ------VGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGA----LDRNTRNKV 255
                   + L  DG+KTG +  +G     +        +I V++ A         R   
Sbjct: 247 LKGLVKHYSALPVDGLKTGTSTKAGNAFTGTVKFSNGNRIITVVMHAGAANDSGTERFTQ 306

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           +A ++S  ++N T          +  +     +  +++ ++ +       Y     +A  
Sbjct: 307 TAEIMSYVYHNYTTTTINKNGKINGVKAVDVQDGKSLTSQLVSNSGATKIYLPTGTDASA 366

Query: 316 KESHFIDFEKITLLKNK 332
                   +  T     
Sbjct: 367 VTGKVSLKKSATTDGKL 383


>gi|325697148|gb|EGD39035.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK160]
          Length = 455

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +A L+++ P    A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIAFLTSLAPLAVRADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|325913382|ref|ZP_08175749.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners UPII
           60-B]
 gi|325477308|gb|EGC80453.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners UPII
           60-B]
          Length = 434

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 120/344 (34%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 68  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 127

Query: 85  NASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +              T+    +  +++SAN  A+ +A ++  + KKFV  M  
Sbjct: 128 EAIAVSKNPEYSNVPLQLGHQYTIKQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRK 187

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 188 QLLDWHISQAQIVTPSGLPNFTLGRDADSNKNADAENELSASDMGILIKHLLLEFPQVLE 247

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L+     K  K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 248 TTRIAKLDFLDGRKTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 306

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTD--RKKINYIIKDFYQQNLSNEV 289
            + ++ VI+GA         R   +  L +  + N +    K+          +  +  +
Sbjct: 307 GRRIVTVIIGARHLNGSDPARFVETKKLYAYFYNNYSLHIYKRWTQFPDKTLIKVKNRTI 366

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
             +   +       I+   ++          +  +  T +   I
Sbjct: 367 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 410


>gi|257080473|ref|ZP_05574834.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis E1Sol]
 gi|256988503|gb|EEU75805.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis E1Sol]
          Length = 475

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGDQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 342 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|256960474|ref|ZP_05564645.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis Merz96]
 gi|256950970|gb|EEU67602.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis Merz96]
          Length = 475

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 342 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|256618116|ref|ZP_05474962.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis ATCC
           4200]
 gi|257088239|ref|ZP_05582600.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis D6]
 gi|256597643|gb|EEU16819.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis ATCC
           4200]
 gi|256996269|gb|EEU83571.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis D6]
          Length = 475

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 342 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|187732796|ref|YP_001879537.1| D-alanyl-D-alanine endopeptidase [Shigella boydii CDC 3083-94]
 gi|187429788|gb|ACD09062.1| penicillin-binding protein 7 [Shigella boydii CDC 3083-94]
          Length = 313

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +            I         + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMAIFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|309803471|ref|ZP_07697565.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 11V1-d]
 gi|308164480|gb|EFO66733.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus iners
           LactinV 11V1-d]
          Length = 425

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 119/344 (34%), Gaps = 36/344 (10%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D  +G ++           AS++KL+T Y+    +K  K    T +  S+
Sbjct: 59  ALNAKAAIIYDLKSGQIMYAKNIKQKLPVASMSKLLTIYLTLKAIKAGKLSWQTKVMPSR 118

Query: 85  NASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            A     +              T+    +  +++SAN  A+ +A ++  + KKFV  M N
Sbjct: 119 EAIAVSKNPEYSNVPLQLGHQYTIKQLYQATLIQSANGAAMVLASAVAGSSKKFVGMMRN 178

Query: 141 TSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
              +  +S    +   G+                  +  +A DM IL   +  +FPQ + 
Sbjct: 179 QLLDWHISQAQIVTPSGLPNFTLGRDADSSKNADAENELSASDMGILIKHLLLEFPQVLE 238

Query: 187 YFQIKGLEI----KGKKYPNTN-------WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
             +I  L+     K  K  N N            +   DG+KTG T A+G  + ++ ++ 
Sbjct: 239 TTRIAKLDFLDGRKTFKMVNWNLMLKGLSQYNEAYP-VDGLKTGTTDAAGACLASTLVKN 297

Query: 236 DQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            + ++ VI+GA     +   R   +  L +  + N +      +              P 
Sbjct: 298 GRRIVTVIIGARHLNGNDPARFVETKKLYAYFYNNYSLHIYKRWTQFPGKTLIKVKNRPI 357

Query: 292 ISEEVCTTQKEIINYNT--QMKEAKDKESHFIDFEKITLLKNKI 333
                C  Q   I  +   ++          +  +  T +   I
Sbjct: 358 NEVRACLYQDTGIWISKGQKLDAELSMNKMPMPIKVGTNIGKLI 401


>gi|329934886|ref|ZP_08284927.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           griseoaurantiacus M045]
 gi|329305708|gb|EGG49564.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           griseoaurantiacus M045]
          Length = 461

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 91/280 (32%), Gaps = 18/280 (6%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                   + + D  +G V+A         PAS  K++ A  V       K   T    +
Sbjct: 58  PAKLTARAWLVADHESGEVLAAFNAHKHLAPASTLKMLFADTVL-----GKFDRTDRHKV 112

Query: 83  SKNA--SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           ++         S+    K +       L L +   + + AV +   +     K V  M  
Sbjct: 113 TREEIADVPTGSSLVGIKENITYTVEQLWLGVFLRSGNDAVHVLSHMNGGIAKTVAEMQA 172

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY----------FQI 190
            + +L    T   +  G    G  ++A D+ + +     +     +            + 
Sbjct: 173 RAADLQALDTQVRSPDGFDHKGQVSSAYDLTLFARHGLKNDDFRRYCGTRTADFPAGGKK 232

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD-R 249
                   +     W + T+ G  G+K G+T  +G     +A +  ++L+  +L      
Sbjct: 233 TFQIQNTDRLLTGAWGLETYEGLIGVKNGYTSHAGNTFTGAATRNGRTLLVSVLHPESGG 292

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
           N   K +A LL  GF +    K +  ++    +       
Sbjct: 293 NGVYKETAKLLDWGFAHVGRLKPVGMLVDPLSEGGAKRVP 332


>gi|313847624|emb|CBY16612.1| putative D-alanyl-d-alanine carboxypeptidase [Chlamydophila
           psittaci RD1]
          Length = 433

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 127/368 (34%), Gaps = 44/368 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +R F     +  L  +F             +     ++   TG V+     D    PAS+
Sbjct: 2   IRVFFRFALLPFLVGLFTHPLYGHIVFPETRGNAVAVVHAETGKVLYAKDIDKRIYPASM 61

Query: 57  TKLMTAYVVFSFL-----KEKKAMLTTPITISKNASEYPPSNSTFKK------------G 99
           TK+ TA  +         +          +I+  A +     S                 
Sbjct: 62  TKIATALFILKKHPDVLNRFIIVKPDAIASITPQAKKQSGYRSPPHWLETDGVTIQLQNK 121

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
             ++  +    L++ SAND A A+A +   +  +F++ +N+  + +G + THF N HG+ 
Sbjct: 122 EEVSGWDLFHALLICSANDAANALAIACSGSVVEFMKQLNDFLREIGCAHTHFNNPHGLH 181

Query: 160 QHGHYTTARDMAILSWRIKTDF-------PQYMHYFQIKGLEIKGKKYPNT---NWAVGT 209
              HYTTA D+  +      +                    + +     N      +   
Sbjct: 182 HPNHYTTAGDLTRIMREGLKEPLFRQVIRTTNYKMAPTNLSQERILNLTNKLILPGSTYY 241

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           +  A G KTG T  +G N+V +A +  +S+I +  G    +   +   +L    F  +  
Sbjct: 242 YPPALGGKTGTTKDAGKNLVFAAKKHGRSIITIAAGYSVMSELYEDVIALCEGVFNEQPL 301

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH-------FID 322
           R+ +    + +  +        +  ++       + Y+    E ++ ++         + 
Sbjct: 302 RRYLIPPTEKYTLR------LGLLGKISIPLPHGVYYDFYASEGEEPKTLSFVPHATKLP 355

Query: 323 FEKITLLK 330
             K  LL 
Sbjct: 356 IHKGDLLG 363


>gi|332365993|gb|EGJ43749.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1059]
          Length = 455

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 147/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  +GDQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKRGDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   ++     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTKPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|113969172|ref|YP_732965.1| D-alanyl-D-alanine endopeptidase [Shewanella sp. MR-4]
 gi|113883856|gb|ABI37908.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella sp. MR-4]
          Length = 318

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 10/255 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +      +  +        ++D  T  ++  + PD     AS+TKLMTA V        K
Sbjct: 37  ATAKKAPAKQQEVAANSALVVDLKTNEILYSSNPDAVRPIASVTKLMTAMVTLDA----K 92

Query: 74  AMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             +   + I+  +  E     S  + GS ++  + L L ++ S N  A ++A       K
Sbjct: 93  LPMDEKLAININDTKEMRGVYSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGHK 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F++ MN  +K LG+  T ++   G+ +    +    + +L           +   + K 
Sbjct: 153 AFIKAMNAKAKALGMKNTRYVEPTGLSEKNVSSARDLVVLLKASEGYPMLGQLSSTEKKT 212

Query: 193 LEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           +     KY     NTN  V          KTGFT  +G  +V       + +  V+L A 
Sbjct: 213 VTFGKPKYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGHCLVMRTEMAKRQVAFVVLDAY 272

Query: 248 DRNTRNKVSASLLSM 262
            + T    +  L + 
Sbjct: 273 GKYTHMADANRLRNW 287


>gi|255970680|ref|ZP_05421266.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis T1]
 gi|255961698|gb|EET94174.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis T1]
          Length = 441

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 8   KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 67

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 68  ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 127

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 128 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 187

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 188 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 247

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 248 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 307

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 308 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 348


>gi|296171457|ref|ZP_06852743.1| serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894143|gb|EFG73903.1| serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 294

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 107/290 (36%), Gaps = 31/290 (10%)

Query: 1   MRQFLVI---IAMAMLSNIFPFLSIA--------------ETNKLPYYTLLDTNTGHVIA 43
           MR+ + +   +A  +   +    + A                     + + D ++G V+A
Sbjct: 1   MRKVMALRVGVAALLTVGVCGATAPASRADSMQPVGSVPIPDGPAQTWIVADLDSGQVLA 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               +    PAS  K++ A V           L + +      ++   +    K G   T
Sbjct: 61  GRDQNVAHPPASTIKVLLALVTLDQ-----VSLDSTVVADAADTQVECNCVGVKPGRLYT 115

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG- 162
               L  L++ S ND A  +A  +    +  V  MN  + +LG ++TH     G+   G 
Sbjct: 116 ARQLLDGLLLVSGNDAANTLA-HMLGGPEATVAKMNAKAASLGATSTHAATPSGLDGPGG 174

Query: 163 -HYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
              +TA D+A++      +            +   +   +   N +  +  + GA G KT
Sbjct: 175 SGSSTAHDLAVIFRAAMANPVFAHITAEPSAMFPGDHGDQLITNQDELLQRYPGAIGGKT 234

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFY 265
           GFT A+    V +A +G + L+  ++         +    +A+L   GF 
Sbjct: 235 GFTDAARKTFVGAAARGGRRLVIAMMYGLVKAGGPSYWDQAATLFDWGFA 284


>gi|256761046|ref|ZP_05501626.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis T3]
 gi|256682297|gb|EEU21992.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis T3]
          Length = 441

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 8   KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 67

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 68  ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 127

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 128 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 187

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 188 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 247

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 248 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 307

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 308 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 348


>gi|327461601|gb|EGF07932.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK1]
 gi|327473321|gb|EGF18741.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sanguinis
           SK408]
          Length = 455

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 146/383 (38%), Gaps = 58/383 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIAE 44
           ++ L+++ +  L+++ P  + A+                   +     ++D +TG V+ E
Sbjct: 6   KKKLLLLGIVFLTSLAPLAARADELVDMAKKMYPHDNVQAINRPKSSLVIDGSTGDVVWE 65

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +KE K    T IT +             +N      
Sbjct: 66  DNVDEVRDPASMSKLMTLYLVFEAIKEGKISEKTVITATPQDQATANIYEISNNKIVAGV 125

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                +     ++  S     +            F+  MN  ++ LG++ T + NA G  
Sbjct: 126 DYTVSELITMTIVPSSNATTVMLANYLSDNDPDAFLDRMNAKAQELGMTNTKWFNASGAA 185

Query: 160 QH---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL++      P+ ++Y     + +K        
Sbjct: 186 AVSFKGYYNPQNYDNYASNQTTARDLAILAYNFVNHHPEILNYTNKAKVTVKAGTPYEET 245

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G DGMKTG +    FN +A+  + DQ +IAVI+G  D +     
Sbjct: 246 FETYNYSLPGAKYALKGVDGMKTGSSPNGAFNYIATIKREDQRMIAVIMGVGDWSDQDGE 305

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS------NEVPNISEEVCTTQKEI 303
             R+    +L+   + +   +K ++   ++   Q           V   +E     +  +
Sbjct: 306 YYRHPFGNALIEKAYADYEYKKLLSKGEQEIDGQKYKLPEDFYATVKKGTEPKVKVENNV 365

Query: 304 INYNTQMKEAKDKESHFIDFEKI 326
           +     +K    K S  +  EK+
Sbjct: 366 LKAENGLKTLSSKISDEMKVEKV 388


>gi|317057306|ref|YP_004105773.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
 gi|315449575|gb|ADU23139.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
          Length = 483

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 134/402 (33%), Gaps = 67/402 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT---------------------LLDTNTG 39
           M++ L +IA  + + +      + T     +                      +++ ++G
Sbjct: 1   MKKKLRVIAALLCAALIFADMGSFTASALSFVPTTVDADGERSEVKLYSDCVYMVNMDSG 60

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT-----ISKNASEYPPSNS 94
            V+ +   +    PASLTKLMTA V+   L   ++ L   +            +   + +
Sbjct: 61  EVVVDINSEKEVPPASLTKLMTAVVLLDELGGDESTLRNKMMSAGTEAFDELYDTGAATA 120

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
             +   +++  + L  L++ SA + A  IA ++ +    FV  MN     LGL  THF N
Sbjct: 121 DIQPNESVSAYDLLAALLIPSACEAANIIAINVGENISGFVDMMNAKVSELGLKHTHFSN 180

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN------------ 202
           AHG+    +Y+TA+D++ +       +P +          +    +              
Sbjct: 181 AHGLFTQQNYSTAKDISTICRYALDKYPVFEELVGSPSFTMAPTDFHPEGTYIASTDYMI 240

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-------------DR 249
             +    +    G+KTG T ++G    + A+      + V +GA              D 
Sbjct: 241 NEYTKYYYAKCRGIKTGTTESAGRCFASYAVSDGVRYLVVTMGAPMEKLAEDVKKGEADP 300

Query: 250 NTRNK---------VSASLLSMGFYNKTDRKKINY-----IIKDFYQQNLSNEVPNISEE 295
            +               +L    F     +  IN       +K  Y +         +  
Sbjct: 301 ESVYADDVVYYSFIDHINLYEWAFDTLVQKDFINESSEVRDVKVGYGKKQDYANLKPANG 360

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN--KITK 335
                   I      K    +++     EK  +L     I K
Sbjct: 361 YSRMWPVNIPIEDVEKRITVRDNIVAPVEKGDVLGTMELIYK 402


>gi|322506467|gb|ADX01921.1| pbpG [Acinetobacter baumannii 1656-2]
 gi|323516346|gb|ADX90727.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 335

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 84  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 142

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 143 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 202

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 203 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 260

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 261 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 320

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 321 ATNLLGW 327


>gi|213155690|ref|YP_002317735.1| D-alanyl-D-alanine carboxypeptidase family protein [Acinetobacter
           baumannii AB0057]
 gi|215484932|ref|YP_002327171.1| Penicillin-binding protein 7 precursor (PBP-7) [Acinetobacter
           baumannii AB307-0294]
 gi|239502064|ref|ZP_04661374.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           AB900]
 gi|301346537|ref|ZP_07227278.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           AB056]
 gi|301512073|ref|ZP_07237310.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           AB058]
 gi|301594839|ref|ZP_07239847.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           AB059]
 gi|213054850|gb|ACJ39752.1| D-alanyl-D-alanine carboxypeptidase family protein [Acinetobacter
           baumannii AB0057]
 gi|213986566|gb|ACJ56865.1| Penicillin-binding protein 7 precursor (PBP-7) [Acinetobacter
           baumannii AB307-0294]
          Length = 335

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 84  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 142

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 143 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 202

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 203 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 260

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 261 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 320

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 321 ATNLLGW 327


>gi|332851496|ref|ZP_08433493.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013150]
 gi|332866804|ref|ZP_08437208.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013113]
 gi|194474667|gb|ACF74453.1| D-alanyl-D-alanine endopeptidase penicillin-binding protein 7/8
           [Acinetobacter baumannii]
 gi|332729949|gb|EGJ61280.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013150]
 gi|332734412|gb|EGJ65532.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6013113]
          Length = 340

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 89  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 147

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 148 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 207

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 208 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 265

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 266 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 325

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 326 ATNLLGW 332


>gi|184156580|ref|YP_001844919.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii ACICU]
 gi|332874936|ref|ZP_08442787.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6014059]
 gi|183208174|gb|ACC55572.1| D-alanyl-D-alanine carboxypeptidase [Acinetobacter baumannii ACICU]
 gi|332736879|gb|EGJ67855.1| serine-type D-Ala-D-Ala carboxypeptidase [Acinetobacter baumannii
           6014059]
          Length = 340

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 89  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 147

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 148 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 207

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 208 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 265

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 266 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 325

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 326 ATNLLGW 332


>gi|329999103|ref|ZP_08303309.1| D-alanyl-D-alanine endopeptidase [Klebsiella sp. MS 92-3]
 gi|328538464|gb|EGF64581.1| D-alanyl-D-alanine endopeptidase [Klebsiella sp. MS 92-3]
          Length = 318

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D  T  +I  + PD     AS+TK+MTA VV     
Sbjct: 26  ALAKTPTAVTASQPEIASGSAMIVDLATKKIIYASQPDLVRPMASITKVMTAMVVLDA-- 83

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                L   +T+   +  E     S  +  S ++  + L L ++ S N  A ++A     
Sbjct: 84  --HLPLDEMLTVDISHTPEMKGIYSRVRLNSQISRRDMLLLALMSSENRAAASLAHHYPG 141

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  ++ LG++ T ++   G+    + +TARD+  L      + +       
Sbjct: 142 GYDAFIRAMNAKAQALGMTHTRYVEPTGL-SVHNVSTARDLTKLLIASEQYPLIGQLSTT 200

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  ++   +   + +  V+
Sbjct: 201 KEETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLIMRTVINQRPVALVV 260

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 261 MDAFGKYTHFADASRLRTW 279


>gi|300769513|ref|ZP_07079399.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308181803|ref|YP_003925931.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|300492928|gb|EFK28110.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308047294|gb|ADN99837.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 444

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 138/377 (36%), Gaps = 45/377 (11%)

Query: 1   MRQFLVIIAMAMLSN----------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           +++ ++ +  A+  +          +    +   +        +D +TG ++ +     P
Sbjct: 7   LKKVMIALVAAVTFSTAGLGIAGADLQAQAASTPSISAKAAIAVDASTGQILYDKNSSKP 66

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS+TK+++ Y+V   + E K      I++SK  ++   +          T   +++ 
Sbjct: 67  MAIASMTKMLSTYLVLKAIHEGKLSWNQKISVSKAVAKMSQNTEYANVPLLSTKTYSVRQ 126

Query: 111 LIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----- 161
           L       SAN    A+ +++  T  KFV  M  T+K+ G++    +NA G+        
Sbjct: 127 LYNATEIYSANAAITALGDAVAGTPHKFVSLMRKTAKSWGITDATIINASGLTNKEVGST 186

Query: 162 ----------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA 206
                      +  +A+D+A ++ ++ +D+P+ +    I     +       K  N N+ 
Sbjct: 187 IGYSNVAASAENEMSAQDVATVAQKLLSDYPEVLKTSSIAHAWFEKGTSSATKMDNRNYM 246

Query: 207 ------VGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGA----LDRNTRNKV 255
                   + L  DG+KTG +  +G     +        +I V++ A         R   
Sbjct: 247 LKGLVKHYSALPVDGLKTGTSTKAGNAFTGTVKFSNGNRIITVVMHAGAANDSGTERFTQ 306

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           +A ++S  ++N T          +  +     +  +++ ++ +       Y     +A  
Sbjct: 307 TAEIMSYVYHNYTTTTINKNGKINGVKAVDVQDGKSLTSQLVSNSGATKIYLPTGTDASA 366

Query: 316 KESHFIDFEKITLLKNK 332
                   +  T     
Sbjct: 367 VTGKVSLKKSATTDGKL 383


>gi|291451721|ref|ZP_06591111.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces albus J1074]
 gi|291354670|gb|EFE81572.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces albus J1074]
          Length = 413

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 94/277 (33%), Gaps = 24/277 (8%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            +      + + D   G V+A +       PAS  K++ A  V   L +          +
Sbjct: 64  PKKLTGRSWIVADAENGDVLAAHNAHWKLPPASTMKMLFADTVLPKLPK-----DEKHLV 118

Query: 83  SKNASEYPPSNSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +        + S+    K       + L L +  S+ + AV +  ++     + V  MN 
Sbjct: 119 TDEELAGVGAGSSLVGVKEDQTYTVHDLWLGVFLSSGNDAVHVLSAMNGGIDRTVADMNA 178

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK---- 196
            ++ L    TH ++  G    G  ++A D+ +++     +     +   +          
Sbjct: 179 RAEELQALDTHVVSPDGYDAKGQLSSAYDLTLIARSGMQEKDFREYCATVSAEFPGEKKK 238

Query: 197 -----GKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                     NTN        +  + G  G+K G T  +G      A +G + L+  ++ 
Sbjct: 239 GKKREHFGIQNTNRLLTGAYGMERYEGIAGVKNGNTTNAGATFTGVAERGGRVLLVTVMN 298

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
               + N   + +A L   GF      + +  ++   
Sbjct: 299 PDGKESNAVYQETARLFDWGFQAAEKAEPVGTLVPPL 335


>gi|239979864|ref|ZP_04702388.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces albus
           J1074]
          Length = 408

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 94/277 (33%), Gaps = 24/277 (8%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            +      + + D   G V+A +       PAS  K++ A  V   L +          +
Sbjct: 59  PKKLTGRSWIVADAENGDVLAAHNAHWKLPPASTMKMLFADTVLPKLPK-----DEKHLV 113

Query: 83  SKNASEYPPSNSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +        + S+    K       + L L +  S+ + AV +  ++     + V  MN 
Sbjct: 114 TDEELAGVGAGSSLVGVKEDQTYTVHDLWLGVFLSSGNDAVHVLSAMNGGIDRTVADMNA 173

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK---- 196
            ++ L    TH ++  G    G  ++A D+ +++     +     +   +          
Sbjct: 174 RAEELQALDTHVVSPDGYDAKGQLSSAYDLTLIARSGMQEKDFREYCATVSAEFPGEKKK 233

Query: 197 -----GKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                     NTN        +  + G  G+K G T  +G      A +G + L+  ++ 
Sbjct: 234 GKKREHFGIQNTNRLLTGAYGMERYEGIAGVKNGNTTNAGATFTGVAERGGRVLLVTVMN 293

Query: 246 --ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
               + N   + +A L   GF      + +  ++   
Sbjct: 294 PDGKESNAVYQETARLFDWGFQAAEKAEPVGTLVPPL 330


>gi|167551122|ref|ZP_02344877.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205324035|gb|EDZ11874.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 315

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLNEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYDAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|134296314|ref|YP_001120049.1| murein-DD-endopeptidase [Burkholderia vietnamiensis G4]
 gi|134139471|gb|ABO55214.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia vietnamiensis G4]
          Length = 383

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 98/247 (39%), Gaps = 7/247 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV              
Sbjct: 121 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDSKAPMT---DQI 177

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 178 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 237

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K+LG++ THF N+ G+      +    + +++   +    +     +   +    + 
Sbjct: 238 AKAKSLGMNDTHFENSTGLSSSNVSSARDLVKMVNAAYQYPLIRQFSTDRTYDVNTGKRT 297

Query: 200 --YPNTNW-AVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             Y +TN    G      G  KTGF   +G  +V  A    + ++ V+L +  + +R   
Sbjct: 298 LVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFAD 357

Query: 256 SASLLSM 262
           ++ L + 
Sbjct: 358 ASRLRNW 364


>gi|256962967|ref|ZP_05567138.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis
           HIP11704]
 gi|256953463|gb|EEU70095.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis
           HIP11704]
          Length = 475

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +P  S+         +  +T +       +          +K
Sbjct: 342 VIPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|221198438|ref|ZP_03571484.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2M]
 gi|221208885|ref|ZP_03581882.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2]
 gi|221171168|gb|EEE03618.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2]
 gi|221182370|gb|EEE14771.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2M]
          Length = 381

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV          +   
Sbjct: 119 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDSKAPMTEQIEVT 178

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 179 D---EDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 235

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--PQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  +           ++      +    K 
Sbjct: 236 AKAKALGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPLIRKFSTDRTYEVYTGKR 294

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 295 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPVVMVLLDSFGKYSRFA 354

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 355 DASRLRNW 362


>gi|161524312|ref|YP_001579324.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           multivorans ATCC 17616]
 gi|189350932|ref|YP_001946560.1| D-alanyl-D-alanine endopeptidase [Burkholderia multivorans ATCC
           17616]
 gi|221214784|ref|ZP_03587753.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD1]
 gi|160341741|gb|ABX14827.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           multivorans ATCC 17616]
 gi|189334954|dbj|BAG44024.1| D-alanyl-D-alanine endopeptidase [Burkholderia multivorans ATCC
           17616]
 gi|221165323|gb|EED97800.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD1]
          Length = 381

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS++KLMTA VV          +   
Sbjct: 119 TPDALALRSSVAYVVDQNTGEPLFDKNSHAVVPIASISKLMTAMVVLDSKAPMTEQIEVT 178

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 179 D---EDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 235

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--PQYMHYFQIKGLEIKG 197
             +K LG++ THF N+ G+    + ++ARD+  +           ++      +    K 
Sbjct: 236 AKAKALGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPLIRKFSTDRTYEVYTGKR 294

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 295 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPVVMVLLDSFGKYSRFA 354

Query: 255 VSASLLSM 262
            ++ L + 
Sbjct: 355 DASRLRNW 362


>gi|262040149|ref|ZP_06013402.1| penicillin-binding protein 7 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042502|gb|EEW43520.1| penicillin-binding protein 7 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 318

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D  T  +I  + PD     AS+TK+MTA VV     
Sbjct: 26  ALAKTPTAVTASQPEIASGSAMIVDLATKKIIYASQPDLVRPMASITKVMTAMVVLDA-- 83

Query: 71  EKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                L   +T+   +  E     S  +  S ++  + L L ++ S N  A ++A     
Sbjct: 84  --HLPLDEMLTVDISHTPEMKGIYSRVRLNSQISRRDMLLLALMSSENRAAASLAHHYPG 141

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQY 184
               F++ MN  ++ LG++ T ++   G+    + +TARD+  L      + +       
Sbjct: 142 GYDAFIRAMNAKAQALGMTHTRYVEPTGL-SVHNVSTARDLTKLLIASEQYPLIGQLSTT 200

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  ++   +   + +  V+
Sbjct: 201 KEETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLIMRTVINQRPVALVV 260

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 261 MDAFGKYTHFADASRLRTW 279


>gi|257420425|ref|ZP_05597415.1| DD-carboxypeptidase [Enterococcus faecalis X98]
 gi|257162249|gb|EEU92209.1| DD-carboxypeptidase [Enterococcus faecalis X98]
          Length = 475

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  ++         +  +T +       +          +K
Sbjct: 342 VVPKGNQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|117621185|ref|YP_858159.1| D-alanyl-D-alanine carboxypeptidase family protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117562592|gb|ABK39540.1| D-alanyl-D-alanine carboxypeptidase family protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 275

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 93/243 (38%), Gaps = 8/243 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     ++D  TG  + +         AS+TKLMTA VV    ++    LT       
Sbjct: 33  QLQSSSALVMDVGTGKTLYQKNATRVRPIASITKLMTALVVLDARQDLGQTLTIDQNDRD 92

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                         G+ ++  +AL L ++ S N +A A+A         FV+ MNN +K 
Sbjct: 93  AIKHTYSRVRM---GTQVSRRDALHLALMSSENRMASALARHYPGGRPAFVRAMNNKAKQ 149

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY---- 200
           LG+  + F ++ G+      T      +++   +    +       K +  +   Y    
Sbjct: 150 LGMRNSRFYDSTGLSTRNVSTAQDLAKLIAAAYRQPLIREFTQDTSKDMRFRTPAYSLMF 209

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  V          KTGFT  +G  ++  A   ++ L  V+L ++ + T    +  +
Sbjct: 210 NNTNPLVKNPDWDVRLSKTGFTDEAGRCLLMRAKPDNRELAIVLLNSVGKRTPVGDANRI 269

Query: 260 LSM 262
              
Sbjct: 270 RKW 272


>gi|256958405|ref|ZP_05562576.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis DS5]
 gi|257078283|ref|ZP_05572644.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis JH1]
 gi|256948901|gb|EEU65533.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis DS5]
 gi|256986313|gb|EEU73615.1| D-alanyl-D-alanine carboxypeptidase [Enterococcus faecalis JH1]
          Length = 475

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +P  S+         +  +T +       +          +K
Sbjct: 342 VIPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|282860935|ref|ZP_06270001.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
 gi|282564671|gb|EFB70207.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
          Length = 412

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 88/282 (31%), Gaps = 26/282 (9%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAM 75
              + +      + + D  +G V+A +       PAS  K++   T              
Sbjct: 57  APVLPKDLTGRSWIVADAESGDVLAAHNSHWRLPPASTLKMLFADTVLPALQPTTSYLVK 116

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                 + +       S+    K       + L L +   + + AV +  S+       V
Sbjct: 117 EQDLAGVGE------GSSLVGVKEDHSYTVHDLWLGVFLQSGNDAVHVLASMYGGVDATV 170

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ---------YMH 186
             M   +  L    T  ++  G       ++A D+ + +                     
Sbjct: 171 AAMQRHAYELQALDTRVVSPDGYDAQNQVSSAYDLTLFARSGLQKADFREYAATASAQFP 230

Query: 187 YFQIKGLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             Q KG + +     NTN        V  + G  G+K G+T  +G      A +  + L+
Sbjct: 231 GEQEKGKKRQSFGIQNTNRLLTGADGVEQYQGIAGVKNGYTTHAGNTFTGVAERNGRVLL 290

Query: 241 AVILGALDRNTR--NKVSASLLSMGFYNKTDRKKINYIIKDF 280
             ++      +    K +ASLL  GF      K +  ++   
Sbjct: 291 VTVMHPDSEVSHAVYKEAASLLDWGFSASGKVKPVGTLVPPK 332


>gi|78186778|ref|YP_374821.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium luteolum DSM
           273]
 gi|78166680|gb|ABB23778.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium luteolum DSM
           273]
          Length = 301

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 71/279 (25%), Positives = 123/279 (44%), Gaps = 21/279 (7%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPA 54
           M++F   L  +  A L +   F S AE ++ P    Y + D     V  +        PA
Sbjct: 1   MKRFGLSLAALFFAALVSQLSFSSPAEASRPPVIDSYIVKDLGYSRVFMQKDTSRLIRPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK++TA +     K     L   + IS  A+   P+ + F+ G  + L + +K  +V 
Sbjct: 61  SLTKILTAVIALESGK-----LDQVVVISPEATGVEPTKAGFRPGDRILLLDLVKASMVN 115

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---HGHYTTARDMA 171
           S+ND A AIA  L  + +KFV+ MN  ++ +G+ ++ F N  G       G+Y+TA D+ 
Sbjct: 116 SSNDAAFAIAIHLSGSVEKFVRAMNYRARAIGMKSSTFTNPAGFDTGRYTGNYSTAEDLL 175

Query: 172 ILSWRIKTDFPQYMHYFQI-----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            L+     +                    +       N  +  +  A G+KTGFT ++G 
Sbjct: 176 ALTEYAIHNPLFNEITMLESIVVRDKRSGRYYLLRTHNKLLARYPYAVGIKTGFTRSAGK 235

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++A A + ++ ++ V+L A     R  ++  +    F 
Sbjct: 236 CLIARARKENRDMLLVMLNAKG--DRWTMAEEMFEKAFA 272


>gi|260662683|ref|ZP_05863577.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus fermentum
           28-3-CHN]
 gi|260552764|gb|EEX25763.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus fermentum
           28-3-CHN]
          Length = 417

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 143/372 (38%), Gaps = 43/372 (11%)

Query: 1   MRQF----------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           MR+           +V     + ++     + + T        +D  TG V+ E      
Sbjct: 1   MRKLRRVCFHLLLVVVTFTTVLATSAGAVANASSTVDARAAITIDAETGQVLYEKNATKR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDN 106
           +  AS+ K++T  V+   +++ K      I ISK      +++  SN    +G + T+ +
Sbjct: 61  YPIASVIKILTLAVIEQDIEQGKLKWDQKIKISKEVAKVANDWRFSNVQLNEGESYTVKS 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---- 162
            ++ +++ SA+  A A+A +   +   F Q M   +K  G++     N  G+        
Sbjct: 121 LVESMMIVSADGSAEALALASAGSTAAFNQKMQAVAKEAGVTDAKIYNMIGLANGDLGEM 180

Query: 163 ----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAV 207
                     +  +A+D+A ++  +   +P  +   + K +       +  +  N N  +
Sbjct: 181 RLKNVSKKAENQLSAKDVAKIARYLVEKYPSVLEITKQKFVNFQVSDSQQYEMVNINSML 240

Query: 208 GTFL------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLL 260
                       DG+KTG T +SG+  V +     + LI V+L      N + KV+ +++
Sbjct: 241 PQNAAASTHGEVDGLKTGMTDSSGYCFVGTGTFNGRRLITVVLKVPGEYNNQFKVTDAMI 300

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                           + DF +   S  V +  ++   T    +   T +  AK+     
Sbjct: 301 GQVLDKYQYLTVNK--LSDFKKGVQSVTVAHAEKKGPKTVGLTLKKATTLWLAKNTSLKK 358

Query: 321 IDFEKITLLKNK 332
            D E I L KNK
Sbjct: 359 ADVELI-LDKNK 369


>gi|307130596|ref|YP_003882612.1| D-alanyl-D-alanine carboxypeptidase [Dickeya dadantii 3937]
 gi|306528125|gb|ADM98055.1| D-alanyl-D-alanine carboxypeptidase [Dickeya dadantii 3937]
          Length = 317

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 92/244 (37%), Gaps = 8/244 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D     V+    PD     AS+TKLMTA VV    +     ++  I+ +
Sbjct: 39  QEIASGSAMVVDLRNNEVLYSANPDVVVPIASVTKLMTAMVVLDANQPLDERISVDISQT 98

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K         S  + GS ++  + L L ++ S N  A ++A       + F+  MN  ++
Sbjct: 99  KE---MKGVYSRVRLGSEISRHDMLLLALMSSENRAAASLAHHYRGGYQAFIAAMNAKAR 155

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
            LG++ T ++   G+      T      +L    +      +   Q K        Y   
Sbjct: 156 ALGMTHTRYVEPTGLSTSNVSTARDLTKLLIASRQYPLLSQLSTTQEKNAVFTQPSYSLP 215

Query: 201 -PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             NTN  +          KTGFT  +G  +V   +   + +  V+L A  + T    +  
Sbjct: 216 FRNTNHLIYRQDWNIQLTKTGFTNQAGHCLVMRTVINGRPVSLVVLDAFGKFTHFADANR 275

Query: 259 LLSM 262
           L + 
Sbjct: 276 LRNW 279


>gi|260551083|ref|ZP_05825287.1| D-alanyl-D-alanine endopeptidase [Acinetobacter sp. RUH2624]
 gi|260405850|gb|EEW99338.1| D-alanyl-D-alanine endopeptidase [Acinetobacter sp. RUH2624]
          Length = 348

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 97  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 155

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 156 QIDFAGANGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVAAMNA 215

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            +++LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 216 KARSLGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 273

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 274 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 333

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 334 ATNLLGW 340


>gi|310827089|ref|YP_003959446.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium limosum KIST612]
 gi|308738823|gb|ADO36483.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium limosum KIST612]
          Length = 314

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 24/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL-------------PYYTLLDTNTGHVIAENYPDHP 50
           FL+I  +++   +F F +I+                      L+  + G V+ +      
Sbjct: 24  FLIIAGLSLYMVVFAFKAISPGGPAHPVNAMGSAGLYSESAVLMRLDGGEVLFQKNSGEK 83

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PASLTKLMT  V+    ++    +T P  +    S    S + F  G  +TL + L  
Sbjct: 84  IYPASLTKLMTVLVILDQFEDLDHTVTLPGEVFDCLSGSGASVAGFLPGEQLTLRDLLYG 143

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
            ++ S  D  + +A +   +E+ F + MN  +  LG++ THF NA G+   GHYTT  DM
Sbjct: 144 CVLPSGADAVMGLACATAGSEENFAELMNGKAAELGMAHTHFKNATGLHDPGHYTTVMDM 203

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---------NTNWAVGTFLGAD--GMKTG 219
           A+L      +                  ++P         N+        G    G KTG
Sbjct: 204 AVLLRAGLKNPDFRELLTTFDYQTEPTNRHPGGVGLSSTLNSLMGTPYPDGVTLLGGKTG 263

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           +T  +G  +   A +  +  IAV  GA   + 
Sbjct: 264 YTEEAGLCLATLAEKDGREYIAVTAGAPGSHE 295


>gi|296136730|ref|YP_003643972.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thiomonas
           intermedia K12]
 gi|295796852|gb|ADG31642.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thiomonas
           intermedia K12]
          Length = 493

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 14/259 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                    + +     ++D  T  V+     D     ASLTKLMTA V+    +     
Sbjct: 201 STAANDDPLSLRSGSALVVDEGTDRVLLSKNADTARPIASLTKLMTAAVILDAHQP---- 256

Query: 76  LTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           +   I I+    +    S+S  + G+ +T +  LKL ++ S N  A A+A +       F
Sbjct: 257 MDQVIEITDADIDTLKWSSSRLRPGTKLTREELLKLALMSSENRAAHALARNYPGGLAAF 316

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGL 193
           +  MN  +++LG++ T ++   G+    + +TA D+A+L          +         +
Sbjct: 317 IPAMNAKARSLGMNTTRYVEPTGL-SPQNESTAHDLALLVKAAYHYPLIREFSTHPESEV 375

Query: 194 EIKGKKYPNTNWAVGTFL---GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           E+  +     N     F         KTG+   +G  +V       + +I V+L A  + 
Sbjct: 376 EVGPRTLQFRNTDHLVFNRGWDILLQKTGYINEAGHCLVLQTKFEGRRVIVVLLDAWGKY 435

Query: 251 TRNKVSASLLSM----GFY 265
           +    +  + +     GF 
Sbjct: 436 SHFGDAQRIRTWLEAKGFD 454


>gi|294340887|emb|CAZ89282.1| putative Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Thiomonas sp. 3As]
          Length = 457

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 14/259 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                    + +     ++D  T  V+     D     ASLTKLMTA V+    +     
Sbjct: 165 STAANDDPLSLRSGSALVVDEGTDRVLLSKNADTARPIASLTKLMTAAVILDAHQP---- 220

Query: 76  LTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           +   I I+    +    S+S  + G+ +T +  LKL ++ S N  A A+A +       F
Sbjct: 221 MDQVIEITDADIDTLKWSSSRLRPGTKLTREELLKLALMSSENRAAHALARNYPGGLAAF 280

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-PQYMHYFQIKGL 193
           +  MN  +++LG++ T ++   G+    + +TA D+A+L          +         +
Sbjct: 281 IPAMNAKARSLGMNTTRYVEPTGL-SPQNESTAHDLALLVKAAYHYPLIREFSTHPESEV 339

Query: 194 EIKGKKYPNTNWAVGTFL---GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           E+  +     N     F         KTG+   +G  +V       + +I V+L A  + 
Sbjct: 340 EVGPRTLQFRNTDHLVFNRGWDILLQKTGYINEAGHCLVLQTKFEGRRVIVVLLDAWGKY 399

Query: 251 TRNKVSASLLSM----GFY 265
           +    +  + +     GF 
Sbjct: 400 SHFGDAQRIRTWLEAKGFD 418


>gi|153813196|ref|ZP_01965864.1| hypothetical protein RUMOBE_03612 [Ruminococcus obeum ATCC 29174]
 gi|149830727|gb|EDM85818.1| hypothetical protein RUMOBE_03612 [Ruminococcus obeum ATCC 29174]
          Length = 417

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 103/261 (39%), Gaps = 18/261 (6%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++ +T   +     D    P +  K+MT  +     +    +  T  
Sbjct: 48  PQGPDITSTAAMIMEDSTQTTVYAKNMDQVLYPGATVKVMTTLLTLENAQLSDQVTMTAT 107

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +S        ++ + +     T++  L  +++ SAND+A+ IAE +  +   FVQ MNN
Sbjct: 108 GVS--GVTDGGASISAQLDEVFTVEQCLYAIMLASANDVALQIAEQIGGSVDGFVQMMNN 165

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI---------- 190
            +  LG + T F N  G+     +TTA DMA+++     +                    
Sbjct: 166 RAVELGCTNTVFTNPTGLPDENQHTTAHDMALITKAAIDNESFRAIAETTSYTIPATNVS 225

Query: 191 ---KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
              + L        NTN +   +    G + G+T ASG  +V  A +   SLIAV+L   
Sbjct: 226 GGERVLTNNFSMLNNTNASYYQY--CLGGREGYTEASGSTLVCGAEKNGVSLIAVVLQGA 283

Query: 248 DRNTRNKVSASLLSMGFYNKT 268
              T    + SLL+ GF N  
Sbjct: 284 SGTT-AAEAVSLLNYGFDNFQ 303


>gi|56412918|ref|YP_149993.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|56127175|gb|AAV76681.1| penicillin-binding protein 7 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
          Length = 315

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSFALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|255348929|ref|ZP_05380936.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis 70]
 gi|255503469|ref|ZP_05381859.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis 70s]
 gi|255507147|ref|ZP_05382786.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           D(s)2923]
 gi|289525596|emb|CBJ15074.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis Sweden2]
 gi|296435156|gb|ADH17334.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis E/150]
 gi|296438876|gb|ADH21029.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis E/11023]
          Length = 437

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 134/375 (35%), Gaps = 48/375 (12%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPA 54
           MR F +     I +A     FP  +   T         ++  ++G ++ E   DH   PA
Sbjct: 1   MRTFFLLCRFFICLAPFFLSFPLYADPHTVLTKGIAAAVVHADSGAILKEKNLDHKIFPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTP-----------------ITISKNASEYPPSNSTFK 97
           S+TK+ TA ++     +      T                       +  E        K
Sbjct: 61  SMTKIATALLILRQYPDVLTRFITTRREPLTSITPQAKQQSGYRSPPHWLETDGMTIQLK 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
               ++  +    L++ SAND A  +A++ C++   F++ +N   + LG   THF + HG
Sbjct: 121 VKEEVSGWDLFHALLISSANDAANVLADACCQSVSAFMRQLNEFLRELGCQNTHFNSPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKYPNTNW-----AV 207
           +    HYTTARD++++      +           Y          +   +TN      + 
Sbjct: 181 LHHPDHYTTARDLSLIMKEALKEPLFRQVIHTASYTMEATNLSPERVLSSTNKLLSSSST 240

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYN 266
             +    G KTG T ++G NI+ +A + ++S+I V  G         + + +L    F  
Sbjct: 241 YFYPPCLGGKTGTTKSAGKNIIFAAEKNNRSIIVVAAGYFGPAAQLYQDAIALCEDLFNE 300

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI----- 321
           +  R  +      +        VP     V     + I Y+    E     +  +     
Sbjct: 301 QLLRCFLIPPASHYP-------VPTRFGTVTAPVAQGIYYDFYPSEGDPLLTLSLEPNKI 353

Query: 322 --DFEKITLLKNKIT 334
                K  LL + I 
Sbjct: 354 SFPIRKGDLLGHWIL 368


>gi|255311369|ref|ZP_05353939.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis 6276]
 gi|255317670|ref|ZP_05358916.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis 6276s]
 gi|296436084|gb|ADH18258.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis G/9768]
 gi|296437012|gb|ADH19182.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis G/11222]
 gi|296437945|gb|ADH20106.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis G/11074]
 gi|297140445|gb|ADH97203.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis G/9301]
 gi|297748681|gb|ADI51227.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis D-EC]
 gi|297749561|gb|ADI52239.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis D-LC]
          Length = 437

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 134/375 (35%), Gaps = 48/375 (12%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPA 54
           MR F +     I +A     FP  +   T         ++  ++G ++ E   DH   PA
Sbjct: 1   MRTFFLLYRFFICLAPFFLSFPLYADPHTVLTKGIAAAVVHADSGAILKEKNLDHKIFPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTP-----------------ITISKNASEYPPSNSTFK 97
           S+TK+ TA ++     +      T                       +  E        K
Sbjct: 61  SMTKIATALLILRQYPDVLTRFITTRREPLTSITPQAKQQSGYRSPPHWLETDGMTIQLK 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
               ++  +    L++ SAND A  +A++ C++   F++ +N   + LG   THF + HG
Sbjct: 121 VKEEVSGWDLFHALLISSANDAANVLADACCQSVSAFMRQLNEFLRELGCQNTHFNSPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKYPNTNW-----AV 207
           +    HYTTARD++++      +           Y          +   +TN      + 
Sbjct: 181 LHHPDHYTTARDLSLIMKEALKEPLFRQVIHTASYTMEATNLSPERVLSSTNKLLSSSST 240

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYN 266
             +    G KTG T ++G NI+ +A + ++S+I V  G         + + +L    F  
Sbjct: 241 YFYPPCLGGKTGTTKSAGKNIIFAAEKNNRSIIVVAAGYFGPAAQLYQDAIALCEDLFNE 300

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI----- 321
           +  R  +      +        VP     V     + I Y+    E     +  +     
Sbjct: 301 QLLRCFLIPPASHYP-------VPTRFGTVTAPVAQGIYYDFYPSEGDPLLTLSLEPNKI 353

Query: 322 --DFEKITLLKNKIT 334
                K  LL + I 
Sbjct: 354 SFPIRKGDLLGHWIL 368


>gi|322421006|ref|YP_004200229.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacter sp.
           M18]
 gi|320127393|gb|ADW14953.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacter sp.
           M18]
          Length = 300

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 15/294 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++      +     +    +    +  P Y +     G V  +   +    PASLTK+MT
Sbjct: 8   KKCACAAILIAGVPVSTADAARSRHPSPTYLV--KINGQVFRQQNANIRRAPASLTKMMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A VV          L   + +S++A+    S    ++G  + + + L   ++ SAND   
Sbjct: 66  ALVVMERCD-----LDEVVVVSRSAARETGSRIGLRRGDKVRVRDLLAAALIASANDACR 120

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL--SWRIKT 179
           A+A+     +K FV  MN  ++ L L  THF NA G    G Y+ A D+A L        
Sbjct: 121 ALADHTSGNQKDFVVQMNARARALDLENTHFTNACGHDNKGLYSNAHDLARLAERAMQLP 180

Query: 180 DFPQYMHYFQIKGLEI---KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
            F + +    ++   +   +     N N  +G + GA G+KTG T  +G  +VA A + +
Sbjct: 181 RFAELVSKRSMRISTVDGKRTYYLRNKNRLIGRYPGAIGVKTGTTPNAGQCLVALAEREE 240

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
           + ++ VI+ + +   R + + +LL   F   + R   +   +    +      P
Sbjct: 241 RKVLVVIMHSQN---RWRAAPALLDAAFAASSPRHVPSNDTESTSARRPDEASP 291


>gi|166154766|ref|YP_001654884.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis 434/Bu]
 gi|166155641|ref|YP_001653896.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301336040|ref|ZP_07224284.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis L2tet1]
 gi|165930754|emb|CAP04251.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis 434/Bu]
 gi|165931629|emb|CAP07205.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 437

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 134/375 (35%), Gaps = 48/375 (12%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPA 54
           MR F +     I +A     FP  +   T         ++  ++G ++ E   DH   PA
Sbjct: 1   MRTFFLLCRFFICLAPFFLSFPLYADPHTVLTKGIAAAVVHADSGAILKEKNLDHKIFPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTP-----------------ITISKNASEYPPSNSTFK 97
           S+TK+ TA ++     +      T                       +  E        K
Sbjct: 61  SMTKIATALLILRQYPDVLTRFITTRREPLTSITPQAKQQSGYRSPPHWLETDGMTIQLK 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
               ++  +    L++ SAND A  +A++ C++   F++ +N   + LG   THF + HG
Sbjct: 121 VKEEVSGWDLFHALLISSANDAANVLADACCQSVSAFMRQLNEFLRELGCQNTHFNSPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKYPNTNW-----AV 207
           +    HYTTARD++++      +           Y          +   +TN      + 
Sbjct: 181 LHHPDHYTTARDLSLIMKEALKEPLFRQVIHTASYTMEATNLSPERVLSSTNKLLSSSST 240

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYN 266
             +    G KTG T ++G NI+ +A + ++S+I V  G         + + +L    F  
Sbjct: 241 YFYPPCLGGKTGTTKSAGKNIIFAAEKNNRSIIVVAAGYFGPAAQLYQDAIALCEDLFNE 300

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI----- 321
           +  R  +      +        VP     V     + I Y+    E     +  +     
Sbjct: 301 QLLRCFLIPPASHYP-------VPTRFGTVTAPVAQGIYYDFYPSEGDPLLTLSLEPNKI 353

Query: 322 --DFEKITLLKNKIT 334
                K  LL + I 
Sbjct: 354 SFPIRKGDLLGHWIL 368


>gi|259502317|ref|ZP_05745219.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259169697|gb|EEW54192.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 407

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 113/292 (38%), Gaps = 32/292 (10%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +  ++I+ + ++       ++A          ++D +TG V+ E   +     AS++KL+
Sbjct: 5   KILVLIMILPLMLAGIATDAMASDRINARAAVMIDASTGQVLYEQNANQKLPVASISKLL 64

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL----LIVKSA 116
           T  V+   LK++     T + +S + +      S    G        ++      +VKSA
Sbjct: 65  TVAVIHDELKQRVITADTKVNVSSDVAAIASDPSYSAIGVQAGQAYTVRELLNAAMVKSA 124

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHG 162
           +   +A+A +     ++F   M+  ++ +GL     +N  G+                  
Sbjct: 125 DGATLALAGADGSNMEEFNLKMDQKAREIGLRNFTIVNPVGLTNGDLKGLKLEQYADNAE 184

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLG----- 212
           +  TA D+A L+  +   +P  +     +         K  K  N N  +          
Sbjct: 185 NAMTANDVARLARYLIQTYPDLLQVTAQRSANFYIAKDKATKAENLNKMLPGDRYAVSGV 244

Query: 213 -ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR--NTRNKVSASLLS 261
             DG+KTG + A+G + V++ +     +I V+L A     + R   +  L  
Sbjct: 245 KIDGLKTGTSAAAGPSFVSTGLYRGHRVITVVLHANGAGGDARFIATQQLYD 296


>gi|302874416|ref|YP_003843049.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulovorans 743B]
 gi|307690978|ref|ZP_07633424.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           cellulovorans 743B]
 gi|302577273|gb|ADL51285.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           cellulovorans 743B]
          Length = 454

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 122/348 (35%), Gaps = 38/348 (10%)

Query: 1   MRQFLVIIA------MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ L+ +       ++     F            Y   +D +TG VI    PD    PA
Sbjct: 1   MKKQLLSLLMASTMLLSFSKTTFAEPIPEPQIVGKYAITVDASTGEVIYAKDPDARVYPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN-------- 106
           S+TK+MTA +V    K     +   +T ++ A    PS+                     
Sbjct: 61  SVTKVMTAILVEKLFK-----IDDMVTYTQTAKIQDPSSINMDIVDIPIGQQIPVSAALK 115

Query: 107 -ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--HGH 163
             +          +A         + K+FV  MN+ +K LG+++T+F+  +G+    + H
Sbjct: 116 AMMLYSANDMTELVATNYPTKGSDSNKEFVALMNSEAKVLGMNSTNFVTTNGLDDNTNEH 175

Query: 164 YTTARDMAILSW-----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA-----VGTFLGA 213
            TTA D++I++             Q  +   I    +   +  N N              
Sbjct: 176 LTTAYDLSIMAREAAKYPNIRAVWQLPNPTNIDFPGLTSVQVGNPNKFLQQGTDFYDPSC 235

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR---NTRNKVSASLLSMGFYNKTDR 270
            G+K+GFT  +G  +++   +  + ++ ++L         T      ++++  +  +   
Sbjct: 236 VGVKSGFTDKAGRCLLSVFERNGRQIVGIVLNCETSYLNQTIYTDMKNIINYSYQAQRSL 295

Query: 271 KKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
                        Y ++       +  +   T  +    +  +  A+D
Sbjct: 296 LTTTEPATGKVTSYSKDSLLTTIPVEYKEYITWGKTKTIDVPVYLAED 343


>gi|257791331|ref|YP_003181937.1| Serine-type D-Ala-D-Ala carboxypeptidase [Eggerthella lenta DSM
           2243]
 gi|257475228|gb|ACV55548.1| Serine-type D-Ala-D-Ala carboxypeptidase [Eggerthella lenta DSM
           2243]
          Length = 467

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 21/311 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            ++   +    Y  ++  + G V  E     P   AS+TK+MT  V    +++    L +
Sbjct: 57  AVAQCPSIDAEYAMVMGAD-GTVYFERNAQSPTQIASITKIMTGVVALDAVEDGLLSLDS 115

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK------ 132
           P+T+S  A+    S++  ++G  M LD ALK L+V S ND AVAIAE++    +      
Sbjct: 116 PVTVSAAAAAVGESSAGLQEGDVMNLDAALKALLVPSGNDAAVAIAETIGALMEPGTSDP 175

Query: 133 --KFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMH 186
              FV  MN  ++ LG + T + N HG+         ++TA D+A +     T+      
Sbjct: 176 EAVFVNAMNAKAQELGCTDTVYDNPHGLDFDAYAGDLHSTAADVAKVVQYAMTNDTFRAA 235

Query: 187 YF--QIKGLEIK------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                      +            T+     +  A G+KTG T  +G +   +A +  + 
Sbjct: 236 VGGGSTTIQVTRADGAKADIYLETTDGFFDIYEYAIGVKTGVTLLAGPSFAGAANKDGRE 295

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L A+++ +     R K + SL    + ++   +  N              V  ++     
Sbjct: 296 LYAIVINSSSEAQRFKDAESLCEWVYQHEISYQLANSPETATMNGTEVPVVAEVAHSGWI 355

Query: 299 TQKEIINYNTQ 309
            +         
Sbjct: 356 DKTVKATLRDP 366


>gi|167634406|ref|ZP_02392727.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|254740331|ref|ZP_05198022.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Kruger B]
 gi|167530294|gb|EDR93020.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
          Length = 428

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 15/301 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P           + T +D  TG ++ +    H   PAS+TK++TA ++    K     
Sbjct: 37  VAPPPKEGPNVFSQFATTIDVKTGDILYDKNAHHRAFPASMTKVLTAILLMEHTK----- 91

Query: 76  LTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                T S+ A +   SN    F+ G T+  + AL +L+V SAND++ AIAE +  + + 
Sbjct: 92  PEDQFTFSQLALDQEKSNYQIEFQPGETINRNTALMILMVLSANDVSYAIAERIGGSVEN 151

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F   MN  +K LG + +HF+  +G+     YTT  DMA+++      +P+ +     K  
Sbjct: 152 FANMMNERAKQLGATDSHFVTPNGLHDPNRYTTPYDMAMITR-GVQKYPEILQAMNTKRT 210

Query: 194 EIKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            +   +   + +   T+     + G KTGFT  +   +V    +    +I V++ A  R 
Sbjct: 211 TVTTSRQTVSIFNKSTYFENPFSIGGKTGFTNEARNTLVLLNEKDGNRIINVVM-ASQRP 269

Query: 251 TRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
              +    +    F     +  ++      K  Y     +     S E+   + E+ N  
Sbjct: 270 EIYEDLKQMADYSFGQFVKQTVLDKHSWHQKTTYLNKDIDSELEKSAELMLKKDEVKNVK 329

Query: 308 T 308
           T
Sbjct: 330 T 330


>gi|331668834|ref|ZP_08369682.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA271]
 gi|331064028|gb|EGI35939.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli TA271]
          Length = 313

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 106/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P                          ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|191165362|ref|ZP_03027204.1| penicillin-binding protein 7 [Escherichia coli B7A]
 gi|190904525|gb|EDV64232.1| penicillin-binding protein 7 [Escherichia coli B7A]
          Length = 313

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 109/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV +        L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLNARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|227514221|ref|ZP_03944270.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus fermentum
           ATCC 14931]
 gi|227087417|gb|EEI22729.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus fermentum
           ATCC 14931]
          Length = 431

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/339 (16%), Positives = 119/339 (35%), Gaps = 29/339 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           T        +D  TG V+     +     AS++K++T  V+   +K  K    T + ++K
Sbjct: 55  TVNAKAAIAIDATTGQVLYAKNANTKLAIASISKIITVGVIEQEIKAGKLSWNTKVKVTK 114

Query: 85  NA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                      SN T   G + T+    +  ++KSA+  A+ ++ +   +   FV+ M  
Sbjct: 115 EEAKLSENTEYSNITLTAGKSYTVKELTEAAMIKSADAAAITLSRATGDSTASFVKKMQA 174

Query: 141 TSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWRIKTDFPQYMH 186
             K  G++     N  G+                  +  TA D+A ++  +  ++P  ++
Sbjct: 175 FVKKAGVTDAKLYNQVGLTNSQMGSYGLKGVAKNAENEMTATDVAKIAQYLIKNYPSLLN 234

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMKTGFTCASGFNIVASAIQGDQSLI 240
             ++    I G      N  +            DG+KTG +  +G   V++       +I
Sbjct: 235 ITKLTSTTIDGTTVTTINKMLPGQSDAPSQVKIDGLKTGTSDKAGACFVSTGTYQGHRII 294

Query: 241 AVILGAL-DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
            V+L A    + R   +A+L  +     T       ++       ++        ++   
Sbjct: 295 TVVLHATGGGDERFTQTANLYHLIANEYTAYTVQPSVVATVPNGKVTTTTLTTQGKITLW 354

Query: 300 QKEII----NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +K+      +     K A          +K  ++     
Sbjct: 355 KKDGTLLSPSLAINSKAADKNGKLTAPVKKGQVVGELTY 393


>gi|240170567|ref|ZP_04749226.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           kansasii ATCC 12478]
          Length = 294

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 96/250 (38%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+AE   +    PAS  K++ A V           L + +   
Sbjct: 41  PDGPAQTWIVADLDSGQVLAERDQNVAHPPASTIKVLLALVALDE-----LDLNSTVVAD 95

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              ++   +    K G T T    L  L++ S ND A  +A+ L   +    + MN  + 
Sbjct: 96  VADTQVECNCVGIKPGRTYTARQLLDALLLVSGNDAANTLAQMLGGQDVAVAK-MNAKAA 154

Query: 144 NLGLSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYM---HYFQIKGLEIKGK 198
            LG  +TH     G+   G    +TA D+A++      +            +   +   +
Sbjct: 155 ALGAGSTHAATPSGLDGPGGSGASTAHDLAVIFRAAMANPVFARITAEPSAMFPGDNGDQ 214

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTGFT A+    V +A +  + L+  ++         T    
Sbjct: 215 PIVNQDELLQRYPGAIGGKTGFTNAARKTFVGAAARNGRRLVIAMMYGMVKEGGPTYWDQ 274

Query: 256 SASLLSMGFY 265
           +ASL   GF 
Sbjct: 275 AASLFDWGFA 284


>gi|317490469|ref|ZP_07948950.1| D-alanyl-D-alanine carboxypeptidase [Eggerthella sp. 1_3_56FAA]
 gi|325831447|ref|ZP_08164701.1| serine-type D-Ala-D-Ala carboxypeptidase [Eggerthella sp. HGA1]
 gi|316910407|gb|EFV32035.1| D-alanyl-D-alanine carboxypeptidase [Eggerthella sp. 1_3_56FAA]
 gi|325486701|gb|EGC89149.1| serine-type D-Ala-D-Ala carboxypeptidase [Eggerthella sp. HGA1]
          Length = 467

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 21/311 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            ++   +    Y  ++  + G V  E     P   AS+TK+MT  V    +++    L +
Sbjct: 57  AVAQCPSIDAEYAMVMGAD-GTVYFERNAQSPTQIASITKIMTGVVALDAVEDGLLSLDS 115

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK------ 132
           P+T+S  A+    S++  ++G  M LD ALK L+V S ND AVAIAE++    +      
Sbjct: 116 PVTVSAAAAAVGESSAGLQEGDVMNLDAALKALLVPSGNDAAVAIAETIGALMEPGTSDP 175

Query: 133 --KFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMH 186
              FV  MN  ++ LG + T + N HG+         ++TA D+A +     T+      
Sbjct: 176 EAVFVNAMNAKAQELGCTDTVYDNPHGLDFDAYAGDLHSTAADVAKVVQYAMTNDTFRAA 235

Query: 187 YF--QIKGLEIK------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                      +            T+     +  A G+KTG T  +G +   +A +  + 
Sbjct: 236 VGGGSTTIQVTRADGAKADIYLETTDGFFDIYEYAIGVKTGVTLLAGPSFAGAANKDGRE 295

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           L A+++ +     R K + SL    + ++   +  N              V  ++     
Sbjct: 296 LYAIVINSSSEAQRFKDAESLCEWVYQHEISYQLANSPETATMNGTEVPVVAEVAHSGWI 355

Query: 299 TQKEIINYNTQ 309
            +         
Sbjct: 356 DKTVKATLRDP 366


>gi|300917026|ref|ZP_07133721.1| beta-lactamase [Escherichia coli MS 115-1]
 gi|300415701|gb|EFJ99011.1| beta-lactamase [Escherichia coli MS 115-1]
          Length = 313

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +    E         + S     + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKEVYSRVRLNSEISRK---DML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|319939487|ref|ZP_08013847.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus anginosus
           1_2_62CV]
 gi|319811473|gb|EFW07768.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus anginosus
           1_2_62CV]
          Length = 458

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 75/394 (19%), Positives = 148/394 (37%), Gaps = 64/394 (16%)

Query: 1   MRQFLVIIAMAMLSN----------------IFPFLSIAETNKLPYYTLLDTNTGHVIAE 44
           M++ L I+   +L                  ++P   +   N+     ++D NTG+++ +
Sbjct: 1   MKKLLTIVCFFVLCVGTITIHADELVDMAQKMYPDEKVNPINRPKSSLIVDANTGNILWQ 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA-----SEYPPSNSTFKKG 99
           +  D   +PAS++KLMT Y+VF  +++ K    T I  +             +N      
Sbjct: 61  DNIDEVRDPASMSKLMTLYLVFEAIQQGKLSENTVIKATPRDEAIAKIYEISNNKIVAGV 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-- 157
                +      +  S     +            F+  MN  +K LG++ T + NA G  
Sbjct: 121 DYTVSELITMTAVPSSNATTVMLANYLSNNDPDTFLDMMNAKAKALGMTNTKWFNASGAA 180

Query: 158 -------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                             + TTARD+AIL +    ++P  ++Y     + +K        
Sbjct: 181 AVSFKGLYTPQRYDNNAANQTTARDLAILGYHFVKNYPNILNYTNKPVVTVKKGTPYEET 240

Query: 205 WAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT---- 251
           +    +          G +G+KTG +    FN +A+  +G+Q LI+VI+G  D       
Sbjct: 241 FETYNYSLPGAKYGIEGVEGLKTGSSPRGAFNYIATIKRGEQRLISVIMGVGDWADQNGE 300

Query: 252 --RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
             R+    +L+   + +   +K  N        Q ++ +   +S++   T K+       
Sbjct: 301 YYRHPFGNALIEKAYADYEYKKVFNAGE-----QEINGKTYKLSKDFYATVKKGTAAKAV 355

Query: 310 MKEA--------KDKESHFIDFEKITLLKNKITK 335
           ++          +   S   + + +T +K+   K
Sbjct: 356 VENDVLKNDNGLEQLSSLISNGDNVTEVKDTAIK 389


>gi|313621847|gb|EFR92532.1| serine-type D-Ala-D-Ala carboxypeptidase [Listeria innocua FSL
           J1-023]
          Length = 272

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 6/255 (2%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           +         +       +     G  + E   D     ASLTKLMTA++V   +   + 
Sbjct: 18  SACSAKQPTVSLSSNAAAVYSVENGIAVYEKNADKVMPIASLTKLMTAFLVLEAVDNNEL 77

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                + + +       S     +  T ++ +    ++V SAND A  +       +  F
Sbjct: 78  SWDEELDLVRLDDPSAVSLYAITQKRTWSVRDLYNAMLVMSANDAAETLG--NRLDDANF 135

Query: 135 VQHMNNTSKNLG-LSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQI- 190
            Q MNN +K LG    T F++A G+   G    +T +D+ +LS ++ +  P+ +      
Sbjct: 136 PQKMNNEAKKLGLSKKTKFVSASGLDVDGKMAVSTTKDLFLLSSKLISTHPEVLETTSKS 195

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
             +  +G    +TN ++G+  G DG+KTGFT  +G+  + +A +  + +I+++L A    
Sbjct: 196 SIITEEGATLESTNDSIGSIQGLDGLKTGFTDEAGYCFIGTAKRDGKRVISIVLDAGTAE 255

Query: 251 TRNKVSASLLSMGFY 265
            R K +  L+ +GF 
Sbjct: 256 KRFKDTEKLMEIGFK 270


>gi|320086606|emb|CBY96377.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 315

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTMINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|91784256|ref|YP_559462.1| murein-DD-endopeptidase [Burkholderia xenovorans LB400]
 gi|91688210|gb|ABE31410.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia xenovorans LB400]
          Length = 389

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS+TKLMTA VV    +         
Sbjct: 127 TPDALMLRSSVAYVIDQNSGEPLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQI 183

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 184 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYFPGGRPAFLAAMN 243

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIK 196
             +K LG++ THF N  G+    + ++ARD+  +                +        +
Sbjct: 244 AKAKQLGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPLIRRFSTDHSYEVYTGKR 302

Query: 197 GKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A    + +I V+L +  + +R   
Sbjct: 303 SLAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQATIHGRPMIMVLLDSSGKYSRFAD 362

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 363 ATRLRTW 369


>gi|257417256|ref|ZP_05594250.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis AR01/DG]
 gi|257159084|gb|EEU89044.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis ARO1/DG]
          Length = 475

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 71/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 42  KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 101

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 102 ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 161

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 162 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPKILEIT 221

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 222 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 281

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 282 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 341

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            VP  S+         +  +T +       +          +K
Sbjct: 342 VVPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 382


>gi|167586734|ref|ZP_02379122.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ubonensis Bu]
          Length = 366

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 11/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS+TKLMTA VV          LT  
Sbjct: 104 TPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASITKLMTAMVVLDSK----LPLTDQ 159

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A +++         FV  M
Sbjct: 160 IEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAASMSRYYPGGRPAFVAAM 219

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGL 193
           N  +K LG++ THF N+ G+    + ++ARD+  +      + +   F     Y    G 
Sbjct: 220 NAKAKALGMADTHFENSTGL-SSQNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVYTGK 278

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                   N              KTGF   +G  +V  A   D+ ++ V+L +  + +R 
Sbjct: 279 RNLAYNSTNALIRGNNSWDIGLQKTGFINEAGECLVMQATIHDRPMVIVLLDSFGKYSRF 338

Query: 254 KVSASLLSM 262
             +A L + 
Sbjct: 339 ADAARLRNW 347


>gi|29830922|ref|NP_825556.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces avermitilis
           MA-4680]
 gi|29608035|dbj|BAC72091.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           avermitilis MA-4680]
          Length = 276

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 22/278 (7%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +++   L+          T       +++  TG  +     D   +  S TK+MTA VV 
Sbjct: 1   MLSTGALTAAPAQAVTKPTITAKGGYVMNNGTGKSLYTKAADTKLSTGSTTKIMTAKVVL 60

Query: 67  SFLKEKKAMLTTPITISKNASEY-----PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           S        L   +T+ K  S+Y       S++    G  +T+   L  L++ S  D A 
Sbjct: 61  SQS---NLNLDAKVTVQKAYSDYIVDNNYASSAHLIVGDKVTVRQLLYGLMLPSGCDAAY 117

Query: 122 AIAESLCK------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           A+A+            K F+  MN+T+K+LG++ THF +  G+    +Y+T RD+  L+ 
Sbjct: 118 ALADKFGSGSTRAARVKSFLSKMNSTAKSLGMTNTHFDSFDGIGHGSNYSTPRDLTKLAS 177

Query: 176 RIKT--------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                                  K    +   + NTN  +GT+ G  G+KTG    + F 
Sbjct: 178 SAMKSSTFRTVVKTKSTKQKATTKSGGYRYYNWDNTNPLLGTYTGTIGVKTGSGPEAKFC 237

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           +V +A +  +++I  +L +     R   +  LL+ GF 
Sbjct: 238 LVFAATRNGKTVIGTVLASTSVANRTADAKKLLNYGFA 275


>gi|255974260|ref|ZP_05424846.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis T2]
 gi|255967132|gb|EET97754.1| D-Alanyl-D-Alanine carboxypeptidase [Enterococcus faecalis T2]
          Length = 441

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 135/343 (39%), Gaps = 43/343 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D ++G ++    PD  WNPAS+ K+MT Y+ F  +++ K  + T +T ++   +
Sbjct: 8   KAAIVVDADSGEILWSQQPDLAWNPASIAKVMTMYLAFEAMEQGKFTMDTTVTATQKDVD 67

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSK 143
                  SN+    G    +   LK++ V S+N   + +A  +   +   FV  MN  + 
Sbjct: 68  ISKIYAISNNKITLGVAYPVRELLKMIAVPSSNVATLMLANLISGNQPTDFVHLMNQKAA 127

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ T + N  G                    + +TARD+A L++    ++P+ +   
Sbjct: 128 ELGMTNTTYYNCSGAQASAFNGLYQMQGIDPNGDNVSTARDLASLTYHFLKNYPEILEIT 187

Query: 189 -----QIKGLEIKGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                +        + +   N++       + G DG+KTG +   GFN +A+  QGD  L
Sbjct: 188 NKPVVKTMVGTPYEETFEAYNYSLPGAKYGYQGVDGLKTGSSPTGGFNYIATVKQGDFRL 247

Query: 240 IAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL------SN 287
           I VILG            R+    +LL   +     +K ++   +    + +        
Sbjct: 248 IEVILGVGNWQNQDGEYERHVAGNALLDYAYTTYERKKLLDKGPQTIDHKKVTLANDLYG 307

Query: 288 EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
            +P  S+         +  +T +       +          +K
Sbjct: 308 VIPKGSQPTFKLVAGQVQVDTPL--TLLNSTVQAPKVAYQEVK 348


>gi|206580756|ref|YP_002237447.1| penicillin-binding protein 7 [Klebsiella pneumoniae 342]
 gi|290508576|ref|ZP_06547947.1| D-alanyl-D-alanine endopeptidase [Klebsiella sp. 1_1_55]
 gi|206569814|gb|ACI11590.1| penicillin-binding protein 7 [Klebsiella pneumoniae 342]
 gi|289777970|gb|EFD85967.1| D-alanyl-D-alanine endopeptidase [Klebsiella sp. 1_1_55]
          Length = 316

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D  T  +I  + PD     AS+TK+MTA VV     
Sbjct: 24  ALAKTSAAVAASQPDIASGSAMIVDLATKKIIYASQPDLVRPMASITKVMTAMVVLDAHL 83

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               MLT  I+   +  E     S  +  S ++    L L ++ S N  A ++A      
Sbjct: 84  PMDEMLTVDIS---HTPEMKGIYSRVRLNSQISRRTMLLLALMSSENRAAASLAHHYPGG 140

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
              F++ MN  ++ LG++ T ++   G+    + +TARD+  L      + +        
Sbjct: 141 YDAFIRAMNAKAQALGMTHTRYVEPTGL-SVHNVSTARDLTKLLIASEQYPLIGQLSTTK 199

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  ++   +   + +  V++
Sbjct: 200 EETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLIMRTVINQRPVALVVM 259

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 260 DAFGKYTHFADASRLRTW 277


>gi|333002850|gb|EGK22406.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri K-272]
 gi|333016854|gb|EGK36178.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri K-227]
          Length = 311

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|16802003|ref|NP_472271.1| hypothetical protein lin2944 [Listeria innocua Clip11262]
 gi|16415485|emb|CAC98169.1| lin2944 [Listeria innocua Clip11262]
          Length = 272

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/244 (27%), Positives = 114/244 (46%), Gaps = 6/244 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +  T  G    E   D     ASLTKLMTA++V   +  KK      + + + 
Sbjct: 29  LSANAAAVYSTENGKAFYEKNADKVMPIASLTKLMTAFLVLEAVDNKKLSWDEELDLIRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++V SAND A  +       +  F Q MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLVMSANDAAETLG--NRLDDANFPQKMNNEAKKL 146

Query: 146 GLSA-THFMNAHGVVQHGHY--TTARDMAILSWRIKTDFPQYMHYFQI-KGLEIKGKKYP 201
           GLS  T F++A G+   G    +T +D+ +LS ++ +  P+ +        +  +G    
Sbjct: 147 GLSNKTKFVSASGLDVDGKMAVSTTKDLFLLSSKLISTHPEVLETTSKSSIITEEGATLE 206

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +TN ++G+  G DG+KTGFT  +G+  + +A +  + +I+++L A     R K +  L+ 
Sbjct: 207 STNDSIGSIQGLDGLKTGFTDEAGYCFIGTAKRDGKRVISIVLDADTAEKRFKDTEKLMG 266

Query: 262 MGFY 265
           +GF 
Sbjct: 267 IGFK 270


>gi|299771873|ref|YP_003733899.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter sp. DR1]
 gi|298701961|gb|ADI92526.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter sp. DR1]
          Length = 335

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 8/251 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               +   +       ++D  TG V+     +     AS+TKLMTA V           +
Sbjct: 80  TSGYNAQPSVSARAALVMDAQTGEVLFSKNTNASVPIASITKLMTAVVTADARLNMSEEI 139

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                I    +    S+ST + G  M     L   ++KS N  A A+A +       FV 
Sbjct: 140 -MLEQIDFAGANGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVA 198

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +  
Sbjct: 199 AMNAKARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFN 256

Query: 197 GK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 K  NTN  V       +  KTG+   +G  +V       +  + V+LG      
Sbjct: 257 LGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQA 316

Query: 252 RNKVSASLLSM 262
           RN  + +LL  
Sbjct: 317 RNNDATNLLGW 327


>gi|330685765|gb|EGG97400.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus
           epidermidis VCU121]
          Length = 429

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 76/360 (21%), Positives = 135/360 (37%), Gaps = 51/360 (14%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAE--------------------TNKLPYYTLLDTNTG 39
           M++ F++II M  + NI    + AE                      +      +  + G
Sbjct: 1   MKRIFILIITMFFVLNIITPFANAENGDVTPVQVAIDNGYSKVTEAYQPESAINVSQD-G 59

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNST 95
            ++ E   D  W PAS+TKLMT Y+    +K+KK  L   + ++    +       SN+ 
Sbjct: 60  QILYEYNKDKVWYPASMTKLMTMYLTLEAVKDKKLSLNDEVKMTDREYQMSTLPELSNTK 119

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
              G   T+ + L++ +  S+N  A+ + E +      F   MN  +K LG+  TH++N 
Sbjct: 120 LYPGQKWTISDLLQITVSNSSNAAALILGEQVSGNVNDFTDLMNKKAKELGMKDTHYVNP 179

Query: 156 HGVVQ--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            G                     T+ARD AIL   +  + P+ + + +       G  Y 
Sbjct: 180 SGAENTRLKSFAPSKYKKTENTTTSARDYAILDQHVINETPKILDFTKQLAPTTHGVTYY 239

Query: 202 NTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNT 251
             N +      +  G DG+KTG +  + +N   +  +    +  VILGA D         
Sbjct: 240 TFNHSLDGADMSLPGTDGLKTGSSDTADYNHTITTKRNGFRINQVILGAGDYKHIGGEKQ 299

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           RN +  +L+   F      K ++   K            ++ + +     +        K
Sbjct: 300 RNMMGNALMERSFNQYKYEKILSKG-KHQINGKTYYVEQDLYDVLPKDFTKKDFQLVIDK 358


>gi|296158343|ref|ZP_06841174.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. Ch1-1]
 gi|295891287|gb|EFG71074.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. Ch1-1]
          Length = 415

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS+TKLMTA VV    +         
Sbjct: 153 TPDALMLRSSVAYVIDQNSGEPLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQI 209

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 210 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYFPGGRPAFLAAMN 269

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIK 196
             ++ LG++ THF N  G+    + ++ARD+  +                +        +
Sbjct: 270 AKARQLGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPLIRRFSTDHSYEVYTGKR 328

Query: 197 GKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A    + +I V+L +  + +R   
Sbjct: 329 SLAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQATIHGRPMIMVLLDSSGKYSRFAD 388

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 389 ATRLRTW 395


>gi|296103782|ref|YP_003613928.1| D-alanyl-D-alanine endopeptidase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058241|gb|ADF62979.1| D-alanyl-D-alanine endopeptidase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 307

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 99/256 (38%), Gaps = 12/256 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +      +           ++D NT  VI  ++PD     AS+TKLMTA VV        
Sbjct: 27  TPAVTTAAAQPQIASGSAMIVDLNTNKVIYASHPDLVRPIASITKLMTAMVVLDA----H 82

Query: 74  AMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             L   + +   +  E     S  +  S ++  N L L ++ S N  A ++A        
Sbjct: 83  LPLDEKLKVDISHTPEMKGVYSRVRLNSEISRKNMLLLALMSSENRAAASLAHHYPGGYD 142

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHY 187
            F++ MN  +K LG++ T F+   G+    + +TARD+  L      + +          
Sbjct: 143 AFIRAMNAKAKALGMNNTRFVEPTGL-SIHNVSTARDLTKLLIASKQYPLIGQLSTTREE 201

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                       + NTN  V          KTGFT A+G  +V   +   + +  V++ A
Sbjct: 202 MATFANPAYTLPFRNTNHLVYRENWNIQLTKTGFTNAAGHCLVMRTVFNGKPVALVVMDA 261

Query: 247 LDRNTRNKVSASLLSM 262
             + T    ++ L + 
Sbjct: 262 FGKYTHFADASRLRTW 277


>gi|302524153|ref|ZP_07276495.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. AA4]
 gi|302433048|gb|EFL04864.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. AA4]
          Length = 409

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 14/246 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               + L D +TG V+A   P     PASL K + A VV +            I  +K  
Sbjct: 95  TSASWVLQDLDTGAVVAAKDPHARERPASLIKTLLALVVVTE-----LKPEQVIVPTKED 149

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +E   +      G   T+D  L  L++ S ND+A A A +L   +   V+ MN  +  +G
Sbjct: 150 AEQECTCVGITAGGHYTVDQLLHGLLMHSGNDVAHAFATALGGVDAAVVK-MNALAARIG 208

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI------KGKKY 200
            + T      G+   G  T+A D++++        P++      K   I           
Sbjct: 209 ATDTRAATPSGLDGPGMSTSAYDLSLVFHY-AMKQPEFAKVVATKNFTIPAVDGKPPIPV 267

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV-SASL 259
            N N  +G + G  G KTGFT  +    V  A +    L  V++ A  R T+    +A L
Sbjct: 268 FNDNKLLGVYPGFLGGKTGFTDDARHTYVGGAERDGHRLAIVMMRAEQRPTKVVDQAAKL 327

Query: 260 LSMGFY 265
           L  GF 
Sbjct: 328 LDYGFA 333


>gi|145595002|ref|YP_001159299.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora tropica
           CNB-440]
 gi|145304339|gb|ABP54921.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora tropica
           CNB-440]
          Length = 428

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 19/254 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM-TAYVVFSFLKEKKAMLTTPITIS 83
                 + + D +TG V+    P     PAS+ KL+ TA ++              +T++
Sbjct: 94  EVTATSWLVADLDTGQVLGSCGPHEYATPASVQKLLLTAALLPD------LDPQQVVTVT 147

Query: 84  KNASEYPPSNSTFK--KGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMN 139
           K   +  P +S      G    ++     L+++S ND A  +A      +     V+ MN
Sbjct: 148 KEDLDIEPDSSAVGLLVGGQYPVETLWLGLLMQSGNDAANVLARLGGGAEGRAGGVRAMN 207

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-- 197
             +++LG   TH +   G+   G +T+A D+A+++     +     +             
Sbjct: 208 EFAEHLGARQTHAVTPSGLDGPGQFTSAYDLALIARACFAEPDFQRYALTETHQIPDQEA 267

Query: 198 -----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                 +  N N  +  + GA G KTGFT  +    V +A +  + L+  +LGA  R  R
Sbjct: 268 LGRKGFQIQNGNSLIDRYPGALGGKTGFTTLARHTYVGAAERDGRRLVVTLLGAESRPLR 327

Query: 253 -NKVSASLLSMGFY 265
             +  A+LL  GF 
Sbjct: 328 GWEQGAALLDWGFA 341


>gi|114048686|ref|YP_739236.1| D-alanyl-D-alanine endopeptidase [Shewanella sp. MR-7]
 gi|113890128|gb|ABI44179.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella sp. MR-7]
          Length = 318

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 10/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +  +        ++D  T  ++  + PD     AS+TKLMTA V        K  +   
Sbjct: 43  PAKQQEVAANSALVVDLKTNEILYSSNPDAVRPIASVTKLMTAMVTLDA----KLPMDEK 98

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           + I+  +  E     S  + GS ++  + L L ++ S N  A ++A       K F++ M
Sbjct: 99  LAININDTKEMRGVYSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGHKAFIKAM 158

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG+  T ++   G+ +    +    + +L           +   + K +     
Sbjct: 159 NAKAKSLGMKNTRYVEPTGLSEKNVSSARDLVVLLKASEGYPMLGQLSSTEKKTVTFGKP 218

Query: 199 KY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           KY     NTN  V          KTGFT  +G  +V       + +  V+L A  + T  
Sbjct: 219 KYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGHCLVMRTEMAKRQVAFVVLDAYGKYTHM 278

Query: 254 KVSASLLSM 262
             +  L + 
Sbjct: 279 ADANRLRNW 287


>gi|170767319|ref|ZP_02901772.1| penicillin-binding protein 7 [Escherichia albertii TW07627]
 gi|170123653|gb|EDS92584.1| penicillin-binding protein 7 [Escherichia albertii TW07627]
          Length = 312

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIATKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|108805102|ref|YP_645039.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rubrobacter xylanophilus
           DSM 9941]
 gi|108766345|gb|ABG05227.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rubrobacter xylanophilus
           DSM 9941]
          Length = 384

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 20/302 (6%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNS 94
           +G ++A +        AS TK+M A V           L   + +S      +  P SN 
Sbjct: 47  SGELLASHDAGERLPMASTTKIMLAIVALRE-----GGLDREVAVSPRAAAYAAPPYSNV 101

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFM 153
             + G  ++L   L   ++ S +D A A+AE+    + ++ V+ MN  ++ LGL  THF 
Sbjct: 102 GLRAGDVLSLRELLMASLISSGDDAAYALAEALGGGSVERLVEKMNREARRLGLEDTHFQ 161

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWAVGT 209
           N  G+    H ++ARD+  +S      +P +      +   I    +     NTN  + T
Sbjct: 162 NPVGLDGRRHRSSARDLVRMSR-EAMQYPLFREIVATRYAVISTPDREIPLTNTNELLFT 220

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD 269
           +  A G+KTG T A+G  +VASA  GD+S +AV+L A  R  R   S  LL  GF     
Sbjct: 221 YPPATGIKTGTTPAAGPCLVASAASGDESYVAVVLDA--RADRFAASLRLLEYGFSAYDR 278

Query: 270 RKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           R+ +    +    +   +          E +            +++   +        E+
Sbjct: 279 RELVRRGERYASVEVPYRRGERVPLVAGESLSALLGPGDRVRREVEVPDEPPGSARRGER 338

Query: 326 IT 327
           + 
Sbjct: 339 LG 340


>gi|119897114|ref|YP_932327.1| D-alanyl-D-alanine carboxypeptidase [Azoarcus sp. BH72]
 gi|119669527|emb|CAL93440.1| D-alanyl-D-alanine carboxypeptidase [Azoarcus sp. BH72]
          Length = 280

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 8/243 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +   + + +  TG V+ E         AS+TKLMTA VV          L   + IS
Sbjct: 24  PQLRSAAFYVANQATGEVLLEKNSSTVLPIASITKLMTAMVVLDAG----LGLNDELAIS 79

Query: 84  KNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
               +    + S    G+ +T +  L+L ++ S N  A A+A      E+ FV+ MN  +
Sbjct: 80  DADIDTLKGTGSRLVLGTRLTREEMLRLALMSSENRAASALARHYPGGERAFVEAMNVKA 139

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP- 201
           + LG   T + ++ G+      +      ++S        +       + ++I G+    
Sbjct: 140 RLLGAWDTRYYDSTGLNPANVSSPRDLAKVVSAAATYPLIREFSTTSERFVDIGGRTLRF 199

Query: 202 -NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  V +        KTG+   +G  +V  A    Q ++ V++ +  R TR   +  +
Sbjct: 200 ANTNSLVRSPDWEIAVSKTGYISEAGRCLVMQAWMHHQPVVIVLMDSNGRYTRTADAQRV 259

Query: 260 LSM 262
              
Sbjct: 260 RKW 262


>gi|319947350|ref|ZP_08021583.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
           ATCC 700641]
 gi|319746592|gb|EFV98852.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
           ATCC 700641]
          Length = 444

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 76/387 (19%), Positives = 150/387 (38%), Gaps = 59/387 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           M++ L+++ + +LS + P   +A+                   +     ++D NTG V+ 
Sbjct: 1   MKKKLLVLGIVVLSLLRPLSIVADELVDMAQKMYPNDHVQAYNRPRSSLVIDANTGDVLW 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI-----TISKNASEYPPSNSTFKK 98
           ++  D   +PAS++KLMT Y++F  +KE K    T +       S +      +N+    
Sbjct: 61  KDNIDEVRDPASMSKLMTLYLLFESMKEGKITKDTVVTATAADQSMSKIYEISNNNIVAG 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 +      +  S     +            F+Q MN  SK LG++ T + N  G 
Sbjct: 121 VDYTVSELITMTAVPSSNVATIMLANLLSNHDADAFIQRMNEKSKELGMTNTIWNNPSGA 180

Query: 159 V---------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+AIL +    ++P+ + Y     + +K       
Sbjct: 181 AISTFQGLYTSYNYPNDAANQTTARDLAILVYHFVKEYPEILSYTNQAKVTVKQGTPYEE 240

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DG+KTG +    FN +A+A +G+Q +I+V++G  D +    
Sbjct: 241 TFDTYNYSLPGARYALEGVDGLKTGSSPRGAFNYIATAKRGEQRIISVVMGVGDWSDQDG 300

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDF------YQQNLSNEVPNISEEVCTTQKE 302
              R+    +L+   F +   +K ++  ++          Q     V    E      K+
Sbjct: 301 EYYRHPFGNALIEKAFADYRYKKLLDKGVQTIDGKTYTLDQPFYATVKKGEENPKLVVKD 360

Query: 303 I-INYNTQMKEAKDKESHFIDFEKITL 328
             +  ++ +    +K S  +  ++  +
Sbjct: 361 GQVEADSGLMTLSEKISDGLPVKEGAV 387


>gi|323213518|gb|EFZ98309.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
          Length = 278

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 104/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLS------------IAETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF                         ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|21225333|ref|NP_631112.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces coelicolor A3(2)]
 gi|9716157|emb|CAC01548.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           coelicolor A3(2)]
          Length = 413

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 93/279 (33%), Gaps = 21/279 (7%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK--- 72
             P            + + D  TG V+A N       PAS  K + A  V   L      
Sbjct: 83  PHPAAPRVPEVSALSWVVADAGTGDVLAANDAHRELPPASTLKTLFALTVLPALPGGIRH 142

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +        I         S+            + L   +  ++ + AV +  SL     
Sbjct: 143 EVGPEDLSGIGP------GSSLVGVVEGQTYRVSDLWNGVFLNSGNDAVHVLASLTGGWS 196

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI-- 190
                M   ++ LG   TH  +  G    G  ++A D+A+             +  ++  
Sbjct: 197 ATAARMQAEARALGARDTHVRSPDGYDAPGQVSSAYDLAVFGREGLRRPDFARYCAKVDA 256

Query: 191 --KGLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              G +       NTN        V  + G  G+K G+T  +G  ++A+A +  ++L+  
Sbjct: 257 MFPGRDGSSYGIMNTNRLLTGADGVQPYPGLIGVKNGYTSNAGNTLIAAARRDGRTLVVT 316

Query: 243 ILGAL--DRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           ++       +   + + +LL  GF    +   +  +  +
Sbjct: 317 VMNPQEGGGHAVYEEARALLDWGFEAAGEVDPVGSLDPE 355


>gi|62180754|ref|YP_217171.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62128387|gb|AAX66090.1| D-alanyl-D-alanine endopeptidase; penicillin-binding protein 7 and
           penicillin-binding protein 8 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322715229|gb|EFZ06800.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 315

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  +          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLLYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|271968855|ref|YP_003343051.1| D-alanyl-D-alanine carboxypeptidase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270512030|gb|ACZ90308.1| D-alanyl-D-alanine carboxypeptidase-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 313

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 7/238 (2%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            L D  TG V            ASLTK+MTAYVV         +      + ++A+    
Sbjct: 63  YLFDPGTGTVHLSKQATRRMPVASLTKVMTAYVVLREAGLNDIVTVNAGDV-RHAATNDA 121

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           + +  + G  +T+   L   ++ S  D   A+A      E +FV  MN  +++LGL+ T 
Sbjct: 122 TAAALRAGERLTVRELLYGAMLPSGADATHALARVYGPGESRFVAKMNAAARSLGLTGTR 181

Query: 152 FMNAHGVVQHGH-YTTARDMAILSWRIKTDFPQY-----MHYFQIKGLEIKGKKYPNTNW 205
           + N+ G+ +    Y+TA+D A L+  +  D           Y   K    +   + NTN 
Sbjct: 182 YGNSDGLPKPSPGYSTAQDQARLADVVLRDPVLRTIASTRRYVVRKSKVHRAHVWTNTNK 241

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
            +G   GA G+KTG+T A+G+ +  +A +    LI VILG    + R + +  LL   
Sbjct: 242 LLGEAPGALGVKTGYTRAAGYCLSFAADRDGHRLIGVILGDTRADRRFQTAGRLLDWA 299


>gi|161613143|ref|YP_001587108.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362507|gb|ABX66275.1| hypothetical protein SPAB_00851 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 313

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|16765498|ref|NP_461113.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|168242251|ref|ZP_02667183.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168466155|ref|ZP_02700025.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194445434|ref|YP_002041439.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|197251040|ref|YP_002147139.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|207857603|ref|YP_002244254.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213161142|ref|ZP_03346852.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213428230|ref|ZP_03360980.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|224583331|ref|YP_002637129.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912611|ref|ZP_04656448.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16420704|gb|AAL21072.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194404097|gb|ACF64319.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195631155|gb|EDX49715.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197214743|gb|ACH52140.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|205338411|gb|EDZ25175.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|206709406|emb|CAR33747.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467858|gb|ACN45688.1| D-alanyl-D-alanine endopeptidase; penicillin-binding protein 7 and
           penicillin-binding protein 8 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|267994231|gb|ACY89116.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|312913159|dbj|BAJ37133.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224821|gb|EFX49884.1| Murein-DD-endopeptidase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322615196|gb|EFY12118.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322617787|gb|EFY14683.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624619|gb|EFY21450.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626930|gb|EFY23726.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634116|gb|EFY30852.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635693|gb|EFY32403.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640172|gb|EFY36836.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646405|gb|EFY42917.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649373|gb|EFY45809.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656493|gb|EFY52782.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661469|gb|EFY57693.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665643|gb|EFY61827.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667167|gb|EFY63334.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671173|gb|EFY67301.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675187|gb|EFY71264.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680795|gb|EFY76830.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686970|gb|EFY82947.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323130495|gb|ADX17925.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323192734|gb|EFZ77961.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198834|gb|EFZ83933.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323205156|gb|EFZ90134.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208199|gb|EFZ93143.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323215776|gb|EGA00519.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222875|gb|EGA07231.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323223859|gb|EGA08162.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231222|gb|EGA15337.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233656|gb|EGA17748.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237726|gb|EGA21786.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245709|gb|EGA29703.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248926|gb|EGA32850.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253002|gb|EGA36835.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258678|gb|EGA42340.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259510|gb|EGA43145.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268293|gb|EGA51768.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271918|gb|EGA55334.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326624002|gb|EGE30347.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326628395|gb|EGE34738.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332989102|gb|AEF08085.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 315

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|284047000|ref|YP_003397340.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Conexibacter
           woesei DSM 14684]
 gi|283951221|gb|ADB53965.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Conexibacter
           woesei DSM 14684]
          Length = 284

 Score =  123 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 109/256 (42%), Gaps = 7/256 (2%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
                P  +  +        + D  TG V+  + P       S  KLMTA V        
Sbjct: 32  AVGTAPQNAQLKLPPHSAAIVADARTGRVLYADRPHRRLLIGSTAKLMTALVALERT--- 88

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L    T    A +   S         + + + L+ L+V S ND A+A+AE +  +++
Sbjct: 89  --SLEDSFTAPAYAGDPTESRVGLGTDEQLLVGDLLRGLLVVSGNDAAIALAEGVAGSQE 146

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            FV+ MN  ++ LG+S T + N  G+      + A  + +     + D  + +       
Sbjct: 147 AFVELMNERAQELGMSDTRYGNPIGLDDGTSSSAADLVTLTRELRRHDAFREIVASPSVT 206

Query: 193 LEIK--GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           L      +   NTN  +G  L  DG+KTG T A+G+ +V SA +G +++I+ +LG     
Sbjct: 207 LSSGAVARTLENTNDLLGGPLAVDGVKTGHTKAAGYVLVGSATRGGRAVISAVLGTRSEA 266

Query: 251 TRNKVSASLLSMGFYN 266
            R++ + +LL  G   
Sbjct: 267 DRDRATMTLLRHGLRR 282


>gi|74316101|ref|YP_313841.1| D-alanyl-D-alanine carboxypeptidase-like protein [Thiobacillus
           denitrificans ATCC 25259]
 gi|74055596|gb|AAZ96036.1| D-alanyl-D-alanine carboxypeptidase-like protein [Thiobacillus
           denitrificans ATCC 25259]
          Length = 321

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 99/262 (37%), Gaps = 25/262 (9%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +           + D  +G  +           AS+TKLMTA +V    +     L   I
Sbjct: 45  APMPELSAQSVLVYDQASGQPLLAKNATMQTPIASITKLMTAMLVIDADQP----LDERI 100

Query: 81  TI-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           TI S +      + S    GS+ T    L L ++ S N  A A+  S      +FV  MN
Sbjct: 101 TITSADRDTLKGTGSRLAIGSSYTRGQLLHLALIASDNRAAHALGRSYPGGIDRFVSTMN 160

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE----- 194
            T++ LG+  T ++   G+   G+ +TA+D+A L      +F +  +             
Sbjct: 161 RTARALGMHDTVYVEPTGL-SSGNRSTAQDLAKLVDFAYQNFSEIRNISTTGYYTLGTQR 219

Query: 195 -------------IKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLI 240
                         +   + NTN          G  KTGF   +G  +V  A   ++ +I
Sbjct: 220 VVVKKKRKKARVLYRPVAFNNTNRLTRMDDWVIGLSKTGFINEAGHCLVMQAQIAERDVI 279

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L A   N R   +A + + 
Sbjct: 280 IVLLDATGTNRRAGDAARIKAW 301


>gi|258622600|ref|ZP_05717622.1| D-alanyl-D-alanine endopeptidase [Vibrio mimicus VM573]
 gi|258585300|gb|EEW10027.1| D-alanyl-D-alanine endopeptidase [Vibrio mimicus VM573]
          Length = 317

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 124/320 (38%), Gaps = 32/320 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA--------------------ETNKLPYYTLLDTNTGH 40
           M++  ++ ++ ++ +     + A                    +        ++D  T  
Sbjct: 1   MKKLSLLGSVFLVCSSLLIAAPAHSADSATATPKATVKKTVKKQELAANSALVIDLKTNE 60

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKG 99
           VI  + PD     AS+TKLMTA V        K  + T + I+ K A E    +S  + G
Sbjct: 61  VIYSSNPDAVRPIASVTKLMTAIVTLDA----KLPMDTKLPITIKEAKEMKGIHSRVRIG 116

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           S ++  + L L ++ S N  A ++A       K F++ MNN +K LG+  T F+   G+ 
Sbjct: 117 SEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNNKAKALGMKNTRFVEPTGLS 176

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-AD 214
           +    +    + +L    K      +   + K +     +Y     NTN  V       D
Sbjct: 177 EKNVSSARDLVLLLKASKKYPMLGQLSATEKKTVTFAKPRYSLDFRNTNRLVFNDNWKID 236

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
             KTGFT A+G  +V     G + +  V+L    + +    +  L +           + 
Sbjct: 237 LTKTGFTNAAGHCLVMRTQMGKRQVAFVVLDTKGKLSPVGDANRLRTWL--ETGKVTPLP 294

Query: 275 YIIKDFYQQNLSNEVPNISE 294
              K + +Q    ++  IS+
Sbjct: 295 ADAKHYKKQRNQEQIAKISD 314


>gi|269836468|ref|YP_003318696.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphaerobacter
           thermophilus DSM 20745]
 gi|269785731|gb|ACZ37874.1| Serine-type D-Ala-D-Ala carboxypeptidase [Sphaerobacter
           thermophilus DSM 20745]
          Length = 386

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 72/279 (25%), Positives = 110/279 (39%), Gaps = 19/279 (6%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                              +D  TG  +A   PD P+ PAS TK++TA +V    +    
Sbjct: 36  APLAAPVPVPAITARAVLAVDLVTGATLAAVNPDMPYPPASTTKMLTALIV---RQHAAL 92

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--------S 126
                I       E   ++   + G  + + + L  L+V S  D A A+A         +
Sbjct: 93  DEVITIEPGDLVDEVIYAHVGLRAGDRVAVRDLLAGLLVPSGGDAARALARVVGARLDPA 152

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP---- 182
                  FV  MN  ++ LG+ +THF+N  G    G  +TARD+AIL   +  D      
Sbjct: 153 ATNPRAAFVAEMNRVARRLGMRSTHFVNPDGRDAPGQRSTARDLAILGAALLKDPFLADV 212

Query: 183 --QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             Q +    +KG   +     +TN  +G  LG  G+KTG T   G N+VA A +GD  +I
Sbjct: 213 VAQPVTTISVKGPNARDITLWSTNHLLGE-LGVHGIKTGTTAEDGENLVAVAWRGDHQVI 271

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
            V LG+ +   R     +L      +    +        
Sbjct: 272 TVTLGSAEGE-RFNDVRALFDALGTHFRWVRLGRDGDHP 309


>gi|118465675|ref|YP_882938.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium avium 104]
 gi|254776211|ref|ZP_05217727.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|118166962|gb|ABK67859.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium avium 104]
          Length = 298

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 14/261 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           S                + + D ++G V+A   P+    PAS  K + A VV        
Sbjct: 35  STQPAGSIPIPDGPAQTWIIADLDSGQVLAGRDPNVAHPPASTIKTLLAQVVLDE----- 89

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   +      ++   +    K G + T    L  L++ S ND A  +A  +    + 
Sbjct: 90  VSLDATVVADAADTQVECNCVGIKPGRSYTARQLLDALLLVSGNDAANTLA-HMLGGPEA 148

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDF---PQYMHYF 188
            V  MN  +  LG + TH     G+        +TA D+A++      +           
Sbjct: 149 TVAKMNAKAAALGATNTHASTPSGLDGPNGSGSSTAHDLAVIFRAAMANPVFAQITAEPS 208

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA-- 246
            +   +   +   N +  +  + GA G KTGFT A+    V +A +G + L+  ++    
Sbjct: 209 AMFPGDNGLQPITNQDELLQRYPGAIGGKTGFTNAARKTFVGAAARGGRRLVIAMMYGLI 268

Query: 247 -LDRNTRNKVSASLLSMGFYN 266
                +    +A+L   GF  
Sbjct: 269 KEGGPSYWDQAATLFDWGFAQ 289


>gi|41409077|ref|NP_961913.1| DacB [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41397436|gb|AAS05296.1| DacB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 289

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 14/261 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           S                + + D ++G V+A   P+    PAS  K + A VV        
Sbjct: 26  STQPAGSIPIPDGPAQTWIIADLDSGQVLAGRDPNVAHPPASTIKTLLAQVVLDE----- 80

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             L   +      ++   +    K G + T    L  L++ S ND A  +A  +    + 
Sbjct: 81  VSLDATVVADAADTQVECNCVGIKPGRSYTARQLLDALLLVSGNDAANTLA-HMLGGPEA 139

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDF---PQYMHYF 188
            V  MN  +  LG + TH     G+        +TA D+A++      +           
Sbjct: 140 TVAKMNAKAAALGATNTHASTPSGLDGPNGSGSSTAHDLAVIFRAAMANPVFAQITAEPS 199

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA-- 246
            +   +   +   N +  +  + GA G KTGFT A+    V +A +G + L+  ++    
Sbjct: 200 AMFPGDNGLQPITNQDELLQRYPGAIGGKTGFTNAARKTFVGAAARGGRRLVIAMMYGLI 259

Query: 247 -LDRNTRNKVSASLLSMGFYN 266
                +    +A+L   GF  
Sbjct: 260 KEGGPSYWDQAATLFDWGFAQ 280


>gi|333025663|ref|ZP_08453727.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
 gi|332745515|gb|EGJ75956.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
          Length = 308

 Score =  123 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 115/291 (39%), Gaps = 19/291 (6%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +          + A +       LLDT++G  +     D     AS TK+MTA VV    
Sbjct: 21  LVAPLVGTAQAASAPSVSAKGAFLLDTSSGKTLYSKAADTKRQMASTTKVMTATVVLDTK 80

Query: 70  KEKKAMLTTPITISKNASEYPPSNS-TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                   T     ++      +++   + G  +T+   L   ++ S  D A A+A++  
Sbjct: 81  GLNLDKKVTIKQAYRDYVVKKGASTSDLRTGDKVTVRQLLYATLLPSGCDAAYALADTFG 140

Query: 129 KTEKK------FVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKT-- 179
             +        F+  MN  +K+L +  T + +  G+     +YTT RD ++L+       
Sbjct: 141 TGKTASARTANFISKMNAKAKSLKMKNTSYDSFDGIPTKSKNYTTPRDASLLARHALKSS 200

Query: 180 ------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                               + +   + NTN  +G++ GA G+KTG    SG  +V +A 
Sbjct: 201 TFRTVVKSKSTKQKATASNGKSRTYTWYNTNKLLGSYKGAIGIKTGTASGSGPCLVFAAT 260

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           +  +++  VIL     + R + +A ++   F + + +      +    Q++
Sbjct: 261 RNGKTVAGVILN---DSKRFEDAAKIMDYAFKSNSAKTMKLQTLPKGAQKD 308


>gi|300821762|ref|ZP_07101907.1| beta-lactamase [Escherichia coli MS 119-7]
 gi|309793012|ref|ZP_07687440.1| beta-lactamase [Escherichia coli MS 145-7]
 gi|331678083|ref|ZP_08378758.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli H591]
 gi|300525604|gb|EFK46673.1| beta-lactamase [Escherichia coli MS 119-7]
 gi|308123298|gb|EFO60560.1| beta-lactamase [Escherichia coli MS 145-7]
 gi|331074543|gb|EGI45863.1| penicillin-binding protein 7 (PBP-7)
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Escherichia coli H591]
          Length = 312

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|323972881|gb|EGB68079.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli TA007]
          Length = 314

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|218462487|ref|ZP_03502578.1| probable serine-type D-Ala-D-Ala carboxypeptidase protein
           [Rhizobium etli Kim 5]
          Length = 494

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 102/260 (39%), Gaps = 25/260 (9%)

Query: 3   QFLVIIAMAMLSNIF-PFLSIAETNKLPYY-TLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           + L I+++A    +     + AE     Y   ++D  TG+V+     D    PASLTK+M
Sbjct: 19  KLLAILSVAFTVVLVDSVNAEAEAANSKYAGIVVDAKTGNVLYSENADRLQYPASLTKMM 78

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+VF  L++ +  L TP+  S +A+   P+    + G T+T++  +  L+  SAND +
Sbjct: 79  TLYLVFEALEQGRIRLDTPVPFSAHAAAQAPTKLGVRAGGTITVEQGILGLVTLSANDAS 138

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A                      LG        +         T  R  A    +    
Sbjct: 139 TA----------------------LGEMLARQRGSLRPADDCQGTRPRHDAHHLSQRPRS 176

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                     +   +              +      KTG+T A+GFN+V+S     +S++
Sbjct: 177 AEHGADDDGARPARLGIA-LRQHFPQYYGYFSTRAFKTGYTRAAGFNLVSSVQVDGKSIV 235

Query: 241 AVILGALDRNTRNKVSASLL 260
           +V+LG      R+    +L+
Sbjct: 236 SVVLGGTSGAARDAQMRNLI 255


>gi|257470787|ref|ZP_05634877.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium ulcerans ATCC
           49185]
 gi|317064992|ref|ZP_07929477.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium ulcerans ATCC
           49185]
 gi|313690668|gb|EFS27503.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium ulcerans ATCC
           49185]
          Length = 376

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 71/347 (20%), Positives = 131/347 (37%), Gaps = 18/347 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M++ + ++ +A++       +        E        LL  + G +      D  +  A
Sbjct: 1   MKKTINVLLLAIVLISSTVFAKDSETLMKEETPSYKAILLGDDKGKIYYSENIDEKYPLA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK+MT  V F  L++    +   I +SK +++   S    K+G   TL++ +K   + 
Sbjct: 61  SLTKMMTLMVTFDQLEKGNIKMKDKIKVSKKSAQTGGSRIFMKEGDVFTLEDLIKATAIY 120

Query: 115 SANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSAT-HFMNAHGVVQ------HGHYTT 166
           SAN+ A AIAE +      KFV+ MN  S +LGL     F    G+            TT
Sbjct: 121 SANNAAYAIAEYIGKGDVDKFVKMMNKKSADLGLEKELEFYTPAGLPSDMTKKGMDAGTT 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                +     K +    +   +   +     K  N N  +G   G  G+KTG     G+
Sbjct: 181 RGIYKLSLAAAKYNKYMEIASIKETTIHNGKLKIKNRNLLLGE-EGIYGIKTGHHSKVGY 239

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ--N 284
           NI   + + +  +  V++G      R++   + +   +     RK  +  +        +
Sbjct: 240 NISVLSDKDNMKIFTVVVGGPTYQKRDESVLNQMEEFYEEYQFRKLTDKNVSIAKVPVFS 299

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
              E  ++  +   T     N + ++   ++K       E    L  
Sbjct: 300 GDKEYADLYPDKNFTDILKKNSDIKISIKRNK-GVIAPVEAGKALGE 345


>gi|262280670|ref|ZP_06058453.1| D-alanyl-D-alanine endopeptidase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257570|gb|EEY76305.1| D-alanyl-D-alanine endopeptidase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 348

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 8/251 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               +   +       ++D  TG V+     +     AS+TKLMTA V           +
Sbjct: 93  TSGYNAQPSVSARAALVMDAQTGEVLFSKNTNASVPIASITKLMTAVVTADARLNMSEEI 152

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                I    +    S+ST + G  M     L   ++KS N  A A+A +       FV 
Sbjct: 153 -MLEQIDFAGANGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRPAFVA 211

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN+ ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +  
Sbjct: 212 AMNSKARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFN 269

Query: 197 GK----KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                 K  NTN  V       +  KTG+   +G  +V       +  + V+LG      
Sbjct: 270 LGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSSQA 329

Query: 252 RNKVSASLLSM 262
           RN  + +LLS 
Sbjct: 330 RNNDATNLLSW 340


>gi|15639787|ref|NP_219237.1| serine-type D-Ala-D-Ala carboxypeptidase (dacC) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189026025|ref|YP_001933797.1| serine-type D-Ala-D-Ala carboxypeptidase [Treponema pallidum subsp.
           pallidum SS14]
 gi|3323112|gb|AAC65769.1| serine-type D-Ala-D-Ala carboxypeptidase (dacC) [Treponema pallidum
           subsp. pallidum str. Nichols]
 gi|189018600|gb|ACD71218.1| serine-type D-Ala-D-Ala carboxypeptidase [Treponema pallidum subsp.
           pallidum SS14]
 gi|291060158|gb|ADD72893.1| serine-type D-Ala-D-Ala carboxypeptidase [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 490

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 32/289 (11%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            +        S         Y + +  +G ++A    D P  PASL KL+T  VV   L+
Sbjct: 81  TLQFTNLSAGSTPPPISARAYAIAEGGSGTLLASFCADLPLPPASLAKLVTCAVVMEALE 140

Query: 71  EKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             +      I +    S  A     S    + G  +++ + L  + + S ND A  +A +
Sbjct: 141 RGELHWQQRIRVPLAGSAQAFAPGSSLIFLRTGEYISVHDLLAGMNIASGNDAAYTLAYA 200

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +   F   MN   +  GL+ T F+   G+    + TTARD  +   +    +P+ + 
Sbjct: 201 VAGSIPAFCTRMNTLVQKWGLTRTRFVEPSGL-SEHNVTTARDFVLFCCQYVRRWPENLA 259

Query: 187 YFQIKGLEIKGK-----KYPNTNWAVGTF----------------LGADGMKTGFTCASG 225
            F  +    +       + P       T                  G DG+KTG+   SG
Sbjct: 260 RFHARSYFQRSNSPATSRIPPHTRFPATNTLLAATAARGNVSTAVPGCDGLKTGYIRESG 319

Query: 226 FNIVASAIQGDQSLIAVILGA------LDRNTRNKVSASLLSMGFYNKT 268
           FN+  S+++GD  +IAVILG         +  R +  A+LL   F +  
Sbjct: 320 FNVALSSLRGDTRIIAVILGGAGNSIPEGKRIRARDGATLLYWAFTHFQ 368


>gi|117921730|ref|YP_870922.1| D-alanyl-D-alanine endopeptidase [Shewanella sp. ANA-3]
 gi|117614062|gb|ABK49516.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella sp. ANA-3]
          Length = 318

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 10/255 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +         +        ++D  T  ++  + PD     AS+TKLMTA V        K
Sbjct: 37  ATAKKAPVKQQEVAANSALVVDLKTNEILYSSNPDAVRPIASVTKLMTAMVTLDA----K 92

Query: 74  AMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             +   + I+  +  E     S  + GS ++  + L L ++ S N  A ++A       K
Sbjct: 93  LPMDEKLAININDTKEMRGVYSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGHK 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F++ MN  +K LG+  T ++   G+ +    +    + +L           +   + K 
Sbjct: 153 AFIKAMNAKAKALGMKNTRYVEPTGLSEKNVSSARDLVVLLKASEGYPMLGQLSSTEKKT 212

Query: 193 LEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           +     KY     NTN  V          KTGFT  +G  +V       + +  V+L A 
Sbjct: 213 VTFGKPKYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGHCLVMRTEMAKRQVAFVVLDAY 272

Query: 248 DRNTRNKVSASLLSM 262
            + T    +  L + 
Sbjct: 273 GKYTHMADANRLRNW 287


>gi|262173460|ref|ZP_06041137.1| murein-DD-endopeptidase [Vibrio mimicus MB-451]
 gi|261890818|gb|EEY36805.1| murein-DD-endopeptidase [Vibrio mimicus MB-451]
          Length = 317

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/319 (20%), Positives = 121/319 (37%), Gaps = 30/319 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA--------------------ETNKLPYYTLLDTNTGH 40
           M++  ++ ++ ++ +     + A                    +        ++D  T  
Sbjct: 1   MKKLSLLGSVFLVCSSLLIAAPAHSADSATATPKATVKKTVKKQELAANSALVIDLKTNE 60

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           VI  + PD     AS+TKLMTA V        +  L   I   + A E    +S  + GS
Sbjct: 61  VIYSSNPDAVRPIASVTKLMTAIVTLDAKLPMETKLPITI---QEAREMKGVHSRVRIGS 117

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++  + L L ++ S N  A ++A       K F++ MN+ +K LG+  T F+   G+ +
Sbjct: 118 EISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNSKAKALGMKNTRFVEPTGLSE 177

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADG 215
               +    + +L    K      +   + K +     +Y     NTN  V       D 
Sbjct: 178 KNVSSARDLVLLLKASKKYPMLGQLSATEKKTVTFAKPRYSLDFRNTNRLVFNDNWKIDL 237

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
            KTGFT A+G  +V     G + +  V+L    + +    +  L +           +  
Sbjct: 238 TKTGFTNAAGHCLVMRTQMGKRQVAFVVLDTKGKLSPVGDANRLRTWL--ETGKVTPLPA 295

Query: 276 IIKDFYQQNLSNEVPNISE 294
             K + +Q    ++  IS+
Sbjct: 296 DAKQYKKQRNQEQIAKISD 314


>gi|330827968|ref|YP_004390920.1| D-alanyl-D-alanine carboxypeptidase family protein [Aeromonas
           veronii B565]
 gi|328803104|gb|AEB48303.1| D-alanyl-D-alanine carboxypeptidase family protein [Aeromonas
           veronii B565]
          Length = 284

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 91/243 (37%), Gaps = 8/243 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + +  TG VI+E   +     ASLTKLMTA VV          L   +T++
Sbjct: 26  PNLSSAAFVVANHRTGEVISERNGNRVMPIASLTKLMTALVVLDA----NLRLNEMLTVT 81

Query: 84  K-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
             +      + S    GS ++    L + ++ S N  A A+A      ++ FV+ MN  +
Sbjct: 82  NADIDRIKGTGSRLAIGSRLSRAEMLHIALMSSENRAASALARHYPGGQRAFVEAMNAKA 141

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           + LG+  T + ++ G+      T      + +        +     +   +    ++   
Sbjct: 142 RMLGMWNTRYADSTGLNPRNVSTAQDLAKLAAAAASYPLIRQYSTDEQSYVRTNKRQLHY 201

Query: 203 TNWAVGTFLGADGM---KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            N       G       KTG+   +G  +V       + +I V+L A   N R   +  +
Sbjct: 202 LNSNRLIREGQWEFTLSKTGYIREAGRCLVLGTKVNREPVIMVLLNAETTNDRVADAKRI 261

Query: 260 LSM 262
            + 
Sbjct: 262 KTW 264


>gi|169797496|ref|YP_001715289.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           AYE]
 gi|260556388|ref|ZP_05828607.1| D-alanyl-D-alanine endopeptidase [Acinetobacter baumannii ATCC
           19606]
 gi|169150423|emb|CAM88320.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           AYE]
 gi|260410443|gb|EEX03742.1| D-alanyl-D-alanine endopeptidase [Acinetobacter baumannii ATCC
           19606]
          Length = 348

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 97  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 155

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 156 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 215

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 216 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 273

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 274 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 333

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 334 ATNLLGW 340


>gi|78066908|ref|YP_369677.1| murein-DD-endopeptidase [Burkholderia sp. 383]
 gi|77967653|gb|ABB09033.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia sp. 383]
          Length = 388

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 9/248 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS++KLMTA VV              
Sbjct: 126 TPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASISKLMTAMVVLDSKTPMT---DQI 182

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 183 EVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYAGGRPAFIAAMN 242

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIKG 197
             +K+LG++ THF N+ G+    + ++ARD+  +           Q+      +    K 
Sbjct: 243 AKAKSLGMTDTHFENSTGL-SSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKR 301

Query: 198 KKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               N+  A+    G       KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 302 NLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGKPMVMVLLDSFGKYSRFA 361

Query: 255 VSASLLSM 262
            +A L + 
Sbjct: 362 DAARLRNW 369


>gi|154710434|gb|ABS84279.1| DacC [Treponema paraluiscuniculi]
          Length = 490

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 69/289 (23%), Positives = 114/289 (39%), Gaps = 32/289 (11%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            + S      S         Y + +  +G ++A    D P  PASL KL+T  VV   L+
Sbjct: 81  TLQSTNLSAGSTPPPISARAYAIAEGGSGTLLASFCADLPLPPASLAKLVTCAVVMEALE 140

Query: 71  EKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
             +      I +    S  A     S    + G  +++ + L  + + S ND A  +A +
Sbjct: 141 RGELHWQQRIRVPLAGSAQAFAPGSSLIFLRTGEYISVHDLLAGMNIVSGNDAAYTLAYA 200

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +   F   MN   +  GL+ T F+   G+    + TTARD  +   +    +P+ + 
Sbjct: 201 VAGSIPAFCTRMNTLVQKWGLTRTRFVEPSGL-SEHNVTTARDFVLFCCQYVRRWPENLA 259

Query: 187 YFQIKGLEIKGK-----KYPNTNWAVGTF----------------LGADGMKTGFTCASG 225
            F  +    +       + P       T                  G DG+KTG+   SG
Sbjct: 260 RFHARSYFQRSNSPATSRIPPHTRFPATNTLLAATAARGNVSTAVPGCDGLKTGYIRESG 319

Query: 226 FNIVASAIQGDQSLIAVILGA------LDRNTRNKVSASLLSMGFYNKT 268
           FN+  S+++GD  +IAVILG         +  R +  A+LL   F +  
Sbjct: 320 FNVALSSLRGDTRIIAVILGGAGNSIPEGKRIRARDGATLLYWAFTHFQ 368


>gi|94991766|ref|YP_599865.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS2096]
 gi|94545274|gb|ABF35321.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS2096]
          Length = 275

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 114/268 (42%), Gaps = 21/268 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ + ++ +A+            +    +   +D  +G V+ E         AS++KL+
Sbjct: 2   IKRLISLVVIALFFAASTVSGEEYSVTAKHAIAVDLESGKVLYEKDAKEVVPVASVSKLL 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           T Y+V+  + + K    +P+TIS            ++        T+   L  L+V +AN
Sbjct: 62  TTYLVYKEVSKGKLNWDSPVTISNYPYELTTNYTISNVPLDKRKYTVKELLSALVVNNAN 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHGH 163
             A+A+AE +  TE KFV  M    +  G+S    +N+ G+                  +
Sbjct: 122 SPAIALAEKIGGTEPKFVDKMKKQLRQWGISDAKVVNSTGLTNHFLGANTYPNTEPDDEN 181

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTG 219
              A D+AI++  +  +FP+ +           G+   + N+ +        G DG+  G
Sbjct: 182 CFCATDLAIIARHLLLEFPEVLKLSSKSSTIFAGQTIYSYNYMLKGMPCYREGVDGLFVG 241

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGAL 247
           ++  +G + VA++++    +I V+L A 
Sbjct: 242 YSKKAGASFVATSVENQMRVITVVLNAD 269


>gi|262037478|ref|ZP_06010938.1| serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia goodfellowii
           F0264]
 gi|261748513|gb|EEY35892.1| serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia goodfellowii
           F0264]
          Length = 356

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 115/335 (34%), Gaps = 8/335 (2%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R+  +I+ + ++S+     +  E        L+    G++  E         AS+TK+M
Sbjct: 4   LRKIFIILTIFVISSFA--FAEGENYFDYKAILIGDTNGNIAREENSYAVRPLASVTKVM 61

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +    +   +  L   + +S+ A+  P              D      I  S N   
Sbjct: 62  TIMLTLDKVHSGEISLNDRVVVSEAAASVPYGIKLVAGNEYTVRDLLKATAIRSSNNAAY 121

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD------MAILS 174
                       +FV  MNN ++  G  +  F + HG+      +            +  
Sbjct: 122 ALAEYVSNGNVYEFVNSMNNKARQSGWDSLRFCSPHGLPPSYTGSCMDQGNARDLYKMAM 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +       +    +  ++    K   TN  +G   G DG+KTG+  A+G NI+ +A +
Sbjct: 182 KAVTYKEYMNIAKESVDFIDHGNIKLTATNHLLGKVPGVDGLKTGYHNAAGSNIILTAKR 241

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
             + +I VILG+     R+ +    ++  F N +   KI           +  +   +  
Sbjct: 242 NGERMILVILGSTKAKNRDAIGEKEINDYFINGSKSFKIIDKDTAVAYAKIGKDRYGLYP 301

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
               T K    +       K      +  + +  +
Sbjct: 302 SEDVTVKSKNGFEKPKLTYKVALKDNVSRKDVGQV 336


>gi|326381944|ref|ZP_08203637.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199370|gb|EGD56551.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 416

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 87/263 (33%), Gaps = 25/263 (9%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            + E      + + D ++G VIA   P   + PAS  K++ A V           L   +
Sbjct: 99  PLPERLNSAGWLIADLDSGRVIAAKDPHGRYRPASTIKVLLALVALDE-----LPLDKQV 153

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             +         +     G   T+ + L  L+V S ND A A+A          +  MN 
Sbjct: 154 EATPEDWSMEGDSCGMGPGGHYTVRDLLSGLVVVSGNDCANALA-GQLGGHDAALAKMNA 212

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----- 195
            +  LG   T   +  G+   G  T+  D+A+L      +   +     +K         
Sbjct: 213 KAAELGARDTRATSPSGLDAPGMSTSPYDLALLFREAMGN-ATFRQLISMKNYTFPGYPK 271

Query: 196 ----------KGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                            +N  +     G  G KTG+T  +    V +A +  + ++   +
Sbjct: 272 RPDVPDDVDHPAWTMGTSNPLLRDDWPGMLGGKTGYTDDALKTFVGAAERNGRRIVITQM 331

Query: 245 GA--LDRNTRNKVSASLLSMGFY 265
                  N   + +  +   GF 
Sbjct: 332 YGLNEADNMYAQQAERMFDYGFA 354


>gi|312973616|ref|ZP_07787788.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 1827-70]
 gi|310332211|gb|EFP99446.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 1827-70]
 gi|323176971|gb|EFZ62561.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 1180]
          Length = 311

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 1   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 61  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|148545048|ref|YP_001272418.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri DSM
           20016]
 gi|184154381|ref|YP_001842722.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus reuteri JCM
           1112]
 gi|227364195|ref|ZP_03848291.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           MM2-3]
 gi|325683399|ref|ZP_08162915.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Lactobacillus reuteri MM4-1A]
 gi|148532082|gb|ABQ84081.1| D-Ala-D-Ala carboxypeptidase A, Serine peptidase, MEROPS family S11
           [Lactobacillus reuteri DSM 20016]
 gi|183225725|dbj|BAG26242.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus reuteri JCM
           1112]
 gi|227070740|gb|EEI09067.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           MM2-3]
 gi|324977749|gb|EGC14700.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Lactobacillus reuteri MM4-1A]
          Length = 403

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 142/367 (38%), Gaps = 35/367 (9%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++  + I+++ M+  +     +A          + D +TG +I +   D     AS+TK
Sbjct: 1   MKKLTVFILSLFMMLMVGSQSVLANNRIDASAAIMADASTGQIIYKQNVDKALPVASITK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           L+T  V+   +++K+    T + I+       ++   S+   K G + ++   +   +VK
Sbjct: 61  LLTILVIEDEIQQKQLSWDTQVKITPEIAAISNDAAYSSIGLKSGQSYSVRTLINAALVK 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------------ 162
           SA+   VA+A +      +F   M   +K +G++ T+ +N+ G+                
Sbjct: 121 SADGATVALATATGDGTDEFNLKMMQKAKKIGMTKTNIVNSVGLDNGDMKSFKLADLPNN 180

Query: 163 --HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLG--- 212
             +  +ARD+AILS    T +P+ +     K ++ +  K       N N  +        
Sbjct: 181 AANTMSARDVAILSQYFVTHYPELLQITAQKEVKFQIAKDQVKTEKNLNKMLPGEQYAVK 240

Query: 213 ---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLS--MGFY 265
               DG+KTG + ++G    ++       +I VIL +    ++ R K + +L        
Sbjct: 241 GVTIDGLKTGTSDSAGACFASTGKYQGHRIITVILHSKGSNKDNRFKATQNLYKILKTED 300

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           +    K  + +        +   +    ++V          +  +     K+       K
Sbjct: 301 HLQKIKVPSSVTTRKVANGVEKTMKLTPQQVTIWSPYDTKTDYTIGTQYKKKKLEAPIWK 360

Query: 326 ITLLKNK 332
              + + 
Sbjct: 361 GERVGSL 367


>gi|318062549|ref|ZP_07981270.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actG]
 gi|318081336|ref|ZP_07988668.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actF]
          Length = 308

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 115/291 (39%), Gaps = 19/291 (6%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +          + A +       LLDT++G  +     D     AS TK+MTA VV    
Sbjct: 21  LVAPLVGTAQAASAPSVSAKGAFLLDTSSGKTLYSKAADTKRQMASTTKVMTATVVLDTK 80

Query: 70  KEKKAMLTTPITISKNASEYPPSNS-TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                   T     ++      +++   + G  +T+   L   ++ S  D A A+A++  
Sbjct: 81  GLNLDKKITIKQAYRDYVVKKGASTSDLRTGDKVTVRQLLYATLLPSGCDAAYALADTFG 140

Query: 129 KTEKK------FVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKT-- 179
             +        F+  MN  +K+L +  T + +  G+     +YTT RD ++L+       
Sbjct: 141 TGKTASARTANFISKMNAKAKSLKMKNTSYDSFDGIPTKSKNYTTPRDASLLARHALKSS 200

Query: 180 ------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                               + +   + NTN  +G++ GA G+KTG    SG  +V +A 
Sbjct: 201 TFRTVVKSKSTKQKATASNGKSRTYTWYNTNKLLGSYKGAIGIKTGTASGSGPCLVFAAT 260

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           +  +++  VIL     + R + +A ++   F + + +      +    Q++
Sbjct: 261 RNGKTVAGVILN---DSKRFEDAAKIMDYAFKSNSAKTMKLQTLPKGAQKD 308


>gi|238798922|ref|ZP_04642387.1| D-alanyl-D-alanine endopeptidase [Yersinia mollaretii ATCC 43969]
 gi|238717232|gb|EEQ09083.1| D-alanyl-D-alanine endopeptidase [Yersinia mollaretii ATCC 43969]
          Length = 313

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 92/247 (37%), Gaps = 10/247 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      ++D  T   I  N  D     AS+TKLMTA VV       K  L   I+
Sbjct: 40  APLELASGSAMVVDLQTNKAIYANNADEVVPIASITKLMTAMVVLDA----KLPLDEIIS 95

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +      E     S  +  S ++  + L L ++ S N  A ++A         F++ MN 
Sbjct: 96  VDIHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFIKAMNA 155

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K+LG++ T ++   G+  +   T      +L    +      +     K    +   Y
Sbjct: 156 KAKSLGMTKTRYVEPTGLSINNVSTARDLTKLLIATKQYPLIGQLSTTTEKMATFREPNY 215

Query: 201 ----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                NTN  V          KTGFT  +G  +    + G++ +  V+L A  + T    
Sbjct: 216 TLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGNRPVALVVLDAFGKYTHFAD 275

Query: 256 SASLLSM 262
           +  L S 
Sbjct: 276 ANRLRSW 282


>gi|226951746|ref|ZP_03822210.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter sp. ATCC
           27244]
 gi|294648989|ref|ZP_06726437.1| D-alanyl-D-alanine endopeptidase [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837536|gb|EEH69919.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter sp. ATCC
           27244]
 gi|292825124|gb|EFF83879.1| D-alanyl-D-alanine endopeptidase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 354

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           S   +       ++D  TG V+     +     AS+TK+MTA V           + T  
Sbjct: 103 SSQPSVNARAALVMDAQTGEVLFSKNTNTALPIASITKVMTAVVTADARLNMSEEV-TLQ 161

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G +M     L   ++KS N  A A+A +       F   MN+
Sbjct: 162 QIDFAGAGGKNSSSTLRAGDSMNRAELLLFALMKSENPAAAALARTYPGGRTAFYAAMNS 221

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            +K LG++ATHF+ + G+   G+ ++ARD+ IL     + +     +      +      
Sbjct: 222 KAKQLGMTATHFIESTGL-HPGNVSSARDLGILVS-AASQYGLIRQFSTTPTYDFNLGYR 279

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LGA     RN  
Sbjct: 280 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVVVLLGAPSTQARNSD 339

Query: 256 SASLLSM 262
           + +LL+ 
Sbjct: 340 ATNLLTW 346


>gi|115523726|ref|YP_780637.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisA53]
 gi|115517673|gb|ABJ05657.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodopseudomonas
           palustris BisA53]
          Length = 385

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 77/218 (35%), Positives = 124/218 (56%)

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
             F+ G+ +T+DNALK+++VKSAND+AV +AE +  +   F + MN  ++ LG++ T+++
Sbjct: 1   MGFRAGTQVTVDNALKMMMVKSANDMAVVLAEGVGGSIDGFSEQMNRAAQRLGMTQTNYV 60

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           N +G+   G  T+ARD+AIL+  I  D P+Y ++  I  +    +  PN N  +G + GA
Sbjct: 61  NPNGLPADGQVTSARDLAILARAIIHDLPEYEYFVHIPAIRFGKRVTPNFNRLIGRYPGA 120

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DGMKTGF CASGFN+VASA +  + LIA++LGA     R   +  LL  GF         
Sbjct: 121 DGMKTGFICASGFNLVASATRNGRRLIAIVLGAPSSQARALKAMQLLERGFGANQLSWLQ 180

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
             +        +    PN+ +E+C  +++    +   +
Sbjct: 181 PALGSVDNLAPIDAAPPNLRDEMCGPKRKRPASDESAE 218


>gi|193212918|ref|YP_001998871.1| Serine-type D-ala-D-ala carboxypeptidase [Chlorobaculum parvum NCIB
           8327]
 gi|193086395|gb|ACF11671.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobaculum parvum NCIB
           8327]
          Length = 411

 Score =  123 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 70/334 (20%), Positives = 142/334 (42%), Gaps = 15/334 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M  F  +I +   +     +     + +  + + +T + + +     D   +PASLTK+M
Sbjct: 23  MLVFGALILLHGNAVAKQKVVPQGEDAVTSFLVKETGSSNFLKAKNIDQRISPASLTKIM 82

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +     +     L   +TI   A++  P+ + FK G  + L + +   +V S+ND A
Sbjct: 83  TCMLAIESGR-----LDDVVTIPPEATKVEPTRAGFKPGDRIRLRDLVAAAMVNSSNDAA 137

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---QHGHYTTARDMAILSWRI 177
            AIA  L  +   FV  MN  ++ LG++ T F N  G       G+++TARD+  L+   
Sbjct: 138 FAIAIHLGGSLNGFVSKMNARARALGMTHTRFTNPAGYDRGSYAGNHSTARDLMKLTEHA 197

Query: 178 K-----TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
                     +       +    K     + N  +  +  + G+KTG+T  +G  ++A A
Sbjct: 198 IRYSEFNKIAKLDRVVFNELNTGKRYSLRSHNKLLDRYPYSVGIKTGYTSKAGPCLIARA 257

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           +   + ++ ++L A     R ++++S+   GF  +T  ++     K   ++  + E+   
Sbjct: 258 VCEGKDMLVIMLHAKT--DRWELASSMFDQGFNLETTPRRTLRGKKTQIEEIRATEIKKS 315

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                ++ K        +K+   K+   +  E +
Sbjct: 316 QAAKKSSTKSSKTAVVSVKKPSVKKPATVPAEVV 349


>gi|169634636|ref|YP_001708372.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           SDF]
 gi|169153428|emb|CAP02565.1| D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii]
          Length = 348

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 97  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 155

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 156 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 215

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            +  LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 216 KAHALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 273

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 274 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 333

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 334 ATNLLGW 340


>gi|145300681|ref|YP_001143522.1| D-alanyl-D-alanine carboxypeptidase; penicillin binding protein 7
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853453|gb|ABO91774.1| D-alanyl-D-alanine carboxypeptidase; penicillin binding protein 7
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 275

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 98/244 (40%), Gaps = 10/244 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     ++D NTG  + +         ASLTKLMTA VV       +  L   ++I +
Sbjct: 33  QLRSSSALVVDVNTGKTLYQKNATRVRPIASLTKLMTALVVLE----GRQSLNQTLSIDQ 88

Query: 85  NASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           N  +      +  +  + +T  +AL L ++ S N +A A+A       + F++ MNN ++
Sbjct: 89  NDRDNVKHTYSRIRFGTKVTRRDALHLTLMSSENRMASALARHYPGGRQAFIRAMNNKAR 148

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-- 201
            LG+  + F ++ G+      T      ++S   +    +       + +      Y   
Sbjct: 149 QLGMRNSRFHDSTGLSTRNVSTAQDLAKLISAAYRQPLIRQFTQDTNRDMRFNTPAYRLM 208

Query: 202 --NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             NTN  V          KTGFT  +G  +V  A    + L  V+L ++ + T    +  
Sbjct: 209 FNNTNPLVKNPDWGVRLSKTGFTDEAGRCLVMRAKPDSRELAIVLLNSVGKRTPIGDANR 268

Query: 259 LLSM 262
           +   
Sbjct: 269 IRKW 272


>gi|187924564|ref|YP_001896206.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           phytofirmans PsJN]
 gi|187715758|gb|ACD16982.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           phytofirmans PsJN]
          Length = 395

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS+TKLMTA VV    +         
Sbjct: 133 TPDALMLRSSVAYVIDQNSGESLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQI 189

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 190 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYFPGGRPAFLAAMN 249

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIK 196
             +K LG++ THF N  G+    + ++ARD+  +                +        +
Sbjct: 250 AKAKQLGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPIIRRFSTDHSYEVYTGKR 308

Query: 197 GKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A    + +I V+L +  + +R   
Sbjct: 309 SLAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQATIHGRPMIMVLLDSSGKYSRFAD 368

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 369 ATRLRTW 375


>gi|193076105|gb|ABO10712.2| D-alanyl-D-alanine endopeptidase penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           ATCC 17978]
          Length = 348

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 97  NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 155

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 156 QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 215

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 216 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 273

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 274 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 333

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 334 ATNLLGW 340


>gi|157369595|ref|YP_001477584.1| D-alanyl-D-alanine endopeptidase [Serratia proteamaculans 568]
 gi|157321359|gb|ABV40456.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Serratia
           proteamaculans 568]
          Length = 309

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 10/248 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +           ++D  T  V+    PD     AS+TKLMTA V          ML+  I
Sbjct: 36  AAEPELASGSAMVVDMQTHKVMYARNPDEVVPIASITKLMTAMVTLDAHLPLDEMLSVDI 95

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             +          S  +  S ++  + L L ++ S N  A ++A         F++ MN 
Sbjct: 96  HQTPE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYGAFIKAMNA 152

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEI 195
            +K+LG++ T ++   G+    + +TARD+  L      + +                  
Sbjct: 153 KAKSLGMTNTRYVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTTERMASFKDPN 211

Query: 196 KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               + NTN  V          KTGFT  +G  +    + G +S+  V+L A  + T   
Sbjct: 212 YTLPFRNTNHLVYNQKWNIQLTKTGFTNEAGHCLAMRTMIGSRSVSLVVLDAFGKYTHFA 271

Query: 255 VSASLLSM 262
            +  L + 
Sbjct: 272 DANRLRTW 279


>gi|194467285|ref|ZP_03073272.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           100-23]
 gi|194454321|gb|EDX43218.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           100-23]
          Length = 403

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 140/367 (38%), Gaps = 35/367 (9%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++  + I+++ M+        +A          + D +TG +I +   D     AS+TK
Sbjct: 1   MKKLTVFILSLFMMLMGGSQSVLANNRIDASAAIMADASTGQIIYKRNVDKALPVASITK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           L+T  V+   +++K+    T + I+       ++   S+   K G + ++   +   +VK
Sbjct: 61  LLTILVIEDEIQQKQLSWDTQVKITPEIAAISNDAAYSSIGLKSGQSYSVRTLINAALVK 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------------ 162
           SA+   VA+A +      +F   M   +K +G++ T+ +N+ G+                
Sbjct: 121 SADGATVALATATGDGTDEFNLKMMQKAKKIGMTKTNIVNSVGLDNGDMKSFKLADLPNN 180

Query: 163 --HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGA-- 213
             +  +ARD+AILS      +P+ +     K ++ +  K       N N  +        
Sbjct: 181 AANTMSARDVAILSQYFVKHYPELLQITAQKEVKFQIAKDQVKTEKNLNKMLPGEQYVVK 240

Query: 214 ----DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLS--MGFY 265
               DG+KTG + ++G    ++       +I VIL +    ++ R K + +L        
Sbjct: 241 GVTIDGLKTGTSDSAGACFASTGKYQGHRIITVILHSKGSNKDNRFKATQNLYKILKTED 300

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           +    K  + +        +   +    ++V          +  +     K+       K
Sbjct: 301 HLQKIKVPSSVTTRKVANGVEKTMKLTPQQVTIWSPYDTKTDYTIGTQYKKKKLEAPIWK 360

Query: 326 ITLLKNK 332
              + + 
Sbjct: 361 GERVGSL 367


>gi|293396038|ref|ZP_06640319.1| penicillin-binding protein 7 [Serratia odorifera DSM 4582]
 gi|291421536|gb|EFE94784.1| penicillin-binding protein 7 [Serratia odorifera DSM 4582]
          Length = 274

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 105/266 (39%), Gaps = 8/266 (3%)

Query: 2   RQFLVIIAMAMLSNI--FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           R+ LV+ A+     +      S  +        +++ N G  + +   +     ASL+KL
Sbjct: 9   RRPLVLFALFSQLWLIGAAHASAPQALHSRAVLVVNANNGKTLYQKQANRRMPIASLSKL 68

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA VV    +            + +      ++S    GST++  + L + ++ S N  
Sbjct: 69  MTAMVVLDNKRPMG---NRVKVTAADRDLLKNTHSRLTVGSTLSRRDMLHIALMSSENRA 125

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A++       + FV  MN  ++ LG++ T F +  G+      T    + +++   + 
Sbjct: 126 AAALSRYYPGGRRAFVAKMNQKARALGMAHTRFYDPTGLTPRNVSTARDLLKMVNNAYRY 185

Query: 180 DFPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGD 236
              ++    + + +     +  Y ++N  +          KTGFT  +G  ++   +   
Sbjct: 186 QSIRHFSTDKQQIVRPGRGQLVYRSSNGLINNPSWKIQLQKTGFTNEAGHCLIMRTVIKG 245

Query: 237 QSLIAVILGALDRNTRNKVSASLLSM 262
           Q +I ++LG+  R      +  L   
Sbjct: 246 QPVIMILLGSQQRYGHYSDAIRLKQW 271


>gi|225023959|ref|ZP_03713151.1| hypothetical protein EIKCOROL_00826 [Eikenella corrodens ATCC
           23834]
 gi|224942984|gb|EEG24193.1| hypothetical protein EIKCOROL_00826 [Eikenella corrodens ATCC
           23834]
          Length = 314

 Score =  122 bits (306), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 9/249 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                         +++  +G ++ +   D     AS++KLM A VV    +     L  
Sbjct: 64  AAVAGPLLTSQSALIMNGRSGEILYQKGIDQVRPIASISKLMAAMVVLDARQNMNETLEI 123

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                        + S    G+T+T    L L ++ S N    A+A +       F+  M
Sbjct: 124 TEA---EIDRLKGTGSRLSVGTTLTRREMLHLGLMSSENRAIHALARNYPGGLPAFMSAM 180

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW----RIKTDFPQYMHYFQIKGLE 194
           N  +++LG+  T F +  G+    + +TARD++++                +    +   
Sbjct: 181 NRKAQSLGMQQTRFYDPTGL-DFRNVSTARDLSLMVRAAHEYPLIRQFSTSNSGSAQTSN 239

Query: 195 IKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            + ++Y N+N  V          KTG+   SG ++V  A    Q LI V+L +    TR 
Sbjct: 240 GRVQQYRNSNALVREGTWNISLQKTGYIRESGRSMVLYANVQRQPLIIVLLNSPSPTTRV 299

Query: 254 KVSASLLSM 262
             + ++ + 
Sbjct: 300 NDARAIQNW 308


>gi|126434529|ref|YP_001070220.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           sp. JLS]
 gi|126234329|gb|ABN97729.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           sp. JLS]
          Length = 264

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 98/259 (37%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           A L+   P  ++A        + L D ++G V+A   P  P  PAS  K++ A VV    
Sbjct: 14  AALAQPQPAGAVALPEGPAQAWLLADLDSGRVLASRNPYEPHAPASTIKVLLAMVVLDH- 72

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                        +++ +E   S      G   T    L  L++ S ND A  +A+ +  
Sbjct: 73  ----LSPDNFARANRSHTEVECSCVGLTPGQPYTTRQLLSALLMVSGNDAANMLAD-MLG 127

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
            ++  V  MN  +  +G  +T   +  G+        TT  D+A++      ++P     
Sbjct: 128 GQRAAVAAMNRKAALVGAKSTRASSPSGLDGPGWESITTPHDLAVMLRAAL-NYPLIAQI 186

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +       GK   N N  +  + G    KTGFT  +    V +A +G++ L  V +   
Sbjct: 187 MRSPTAPFPGKTLTNQNELLSRYPGDIAGKTGFTNLARKTYVGAAQRGNRRLAVVQMYGT 246

Query: 248 DRNTRNKVSASLLSMGFYN 266
                   +  L   GF  
Sbjct: 247 G--DLYGQAIGLFDYGFSQ 263


>gi|156933292|ref|YP_001437208.1| D-alanyl-D-alanine endopeptidase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531546|gb|ABU76372.1| hypothetical protein ESA_01104 [Cronobacter sakazakii ATCC BAA-894]
          Length = 310

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 12/246 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D  T  V+  ++PD     AS+TK+MTA VV          L   +T+ 
Sbjct: 40  PQIASGSAMIVDLRTNEVLFSSHPDLVRPIASITKVMTAMVVLDAS----LPLDEMLTVD 95

Query: 84  -KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
             +  E     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +
Sbjct: 96  ISHTPEMKGIYSRVRLNSQISRKNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKA 155

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKG 197
           K LG+  THF+   G+    + +TARD+  L      + +                    
Sbjct: 156 KALGMRNTHFVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREEMATFSNPTYT 214

Query: 198 KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             + NTN  V          KTGFT A+G  ++   +  ++ +  V++ A  + T    +
Sbjct: 215 LPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLMMRTLIKNRPVTLVVMDAFGKYTHFADA 274

Query: 257 ASLLSM 262
           + L + 
Sbjct: 275 SRLRTW 280


>gi|238784240|ref|ZP_04628252.1| D-alanyl-D-alanine endopeptidase [Yersinia bercovieri ATCC 43970]
 gi|238714807|gb|EEQ06807.1| D-alanyl-D-alanine endopeptidase [Yersinia bercovieri ATCC 43970]
          Length = 313

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 95/261 (36%), Gaps = 10/261 (3%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A+A                     ++D  T  VI  N PD     AS+TKLMTA VV  
Sbjct: 26  LAVASGGTTETKGKAPLELASGSAMVVDLQTNKVIYANNPDEVVPIASITKLMTAMVVLD 85

Query: 68  FLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K  L   I++      E     S  +  S ++  + L L ++ S N  A ++A  
Sbjct: 86  A----KLPLDEIISVDVHQTKEMKGVFSRVRVNSEISRKDMLLLALMSSENRAAASLAHH 141

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
                  FV  MN  +K+LG++ TH+    G+      T      +L    +      + 
Sbjct: 142 YPGGYNAFVNAMNVKAKSLGMTKTHYTEPTGLSIDNVSTARDLTKLLIATKQYPLIGQLS 201

Query: 187 YFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               K    +   Y     NTN  V          KTGFT  +G  +    + G + +  
Sbjct: 202 TTTEKMATFREPNYTLPFRNTNHLVYNDKWNIQLTKTGFTNQAGHCLAMRTVIGSRPVAL 261

Query: 242 VILGALDRNTRNKVSASLLSM 262
           V+L A  + T    +  L S 
Sbjct: 262 VVLDAFGKYTHFADANRLRSW 282


>gi|323944951|gb|EGB41016.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli H120]
          Length = 314

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    P    A                     ++D NT  VI  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPLAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|184154585|ref|YP_001842925.1| D-alanyl-D-alanine [Lactobacillus fermentum IFO 3956]
 gi|183225929|dbj|BAG26445.1| D-alanyl-D-alanine [Lactobacillus fermentum IFO 3956]
          Length = 411

 Score =  122 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 118/339 (34%), Gaps = 29/339 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           T        +D  TG ++     +     AS++K++T  V+   +K  K    T + ++K
Sbjct: 35  TVNAKAAIAIDATTGQILYAKNANTKLAIASISKIITVGVIEQEIKAGKLSWNTKVKVTK 94

Query: 85  NA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                      SN T   G + T+    +  ++KSA+  A+ ++ +   +   FV+ M  
Sbjct: 95  EEAKLSENTEYSNITLTAGKSYTVKELTEAAMIKSADAAAITLSRATGDSTASFVKKMQA 154

Query: 141 TSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWRIKTDFPQYMH 186
             K  G++     N  G+                  +  TA D+A ++  +  ++P  ++
Sbjct: 155 FVKKAGVTDAKLYNQVGLTNSQMGSYGLKGVAKNAENEMTATDVAKIAQYLIKNYPSLLN 214

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMKTGFTCASGFNIVASAIQGDQSLI 240
             ++    I G      N  +            DG+KTG +  +G   V++       +I
Sbjct: 215 ITKLTSTTIDGTTVTTINKMLAGQSDAPTQVKIDGLKTGTSDKAGACFVSTGTYQGHRII 274

Query: 241 AVILGAL-DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
            V+L A    + R   +A+L  +     T       +        ++        ++   
Sbjct: 275 TVVLHATGGGDERFTQTANLYHLIANEYTAYTVQPSVAVTVPNGKVTTTTLTTQGKITLW 334

Query: 300 QKEII----NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +K+      +     K A          +K  ++     
Sbjct: 335 KKDGTLLSPSLAINSKAADKNGKLTAPVKKGQVVGELTY 373


>gi|76789288|ref|YP_328374.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           A/HAR-13]
 gi|237802980|ref|YP_002888174.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           B/Jali20/OT]
 gi|237804902|ref|YP_002889056.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|76167818|gb|AAX50826.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           A/HAR-13]
 gi|231273202|emb|CAX10115.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274214|emb|CAX11008.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 437

 Score =  122 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 75/375 (20%), Positives = 135/375 (36%), Gaps = 48/375 (12%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLPY--YTLLDTNTGHVIAENYPDHPWNPA 54
           MR F +     I +A     FP  +   T         ++  ++G ++ E   DH   PA
Sbjct: 1   MRTFFLLCRFFICLAPFFLSFPLYADPHTVLTKGIVAAVVHADSGAILKEKNLDHKIFPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTP-----------------ITISKNASEYPPSNSTFK 97
           S+TK+ TA ++     +      T                       +  E        K
Sbjct: 61  SMTKIATALLILRQYPDVLTRFITTRREPLTSITPQAKQQSGYRSPPHWLETDGMTIQLK 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
               ++  +    L++ SAND A  +A++ C++   F++ +N   + LG   THF + HG
Sbjct: 121 VKEEVSGWDLFHALLISSANDAANVLADACCQSVSAFMRQLNEFLRELGCQNTHFNSPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKYPNTNW-----AV 207
           +    HYTTARD++++      +       +   Y          +   +TN      + 
Sbjct: 181 LHHPDHYTTARDLSLIMKEALKEPLFRQVIRTASYTMEATNLSPERVLSSTNKLLSSSST 240

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYN 266
             +    G KTG T ++G NI+ +A + ++S+I V  G         + + +L    F  
Sbjct: 241 YFYPPCLGGKTGTTKSAGKNIIFAAEKNNRSIIVVAAGYFGPAAQLYQDAIALCEDLFNE 300

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI----- 321
           +  R  +      +        VP     V     + I Y+    E     +  +     
Sbjct: 301 QLLRCFLIPPASHYP-------VPTRFGTVTAPVAQGIYYDFYPSEGDPLLTLSLEPNKI 353

Query: 322 --DFEKITLLKNKIT 334
                K  LL + I 
Sbjct: 354 SFPIRKGDLLGHWIL 368


>gi|296395141|ref|YP_003660025.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Segniliparus
           rotundus DSM 44985]
 gi|296182288|gb|ADG99194.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Segniliparus
           rotundus DSM 44985]
          Length = 304

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 15/256 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + L D ++G ++A   P     PAS  K + A  V          L 
Sbjct: 46  AGSPEVPDGPAEAWLLADMDSGEILAAKNPYAYHAPASTIKTLLALTVIDE-----VPLD 100

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           + +  +++                 ++   L  L++ S ND A  +AE+L       V  
Sbjct: 101 STVLANRSDLAECSCVGVTTGRE-YSVRQLLDGLLLVSGNDAANTLAEAL-GGFDAAVAK 158

Query: 138 MNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK---G 192
           MN  +  +G S T   +  G+       +TT RD+A++     +         +      
Sbjct: 159 MNEKAAEIGASDTRTGSPSGLDWPGMEMHTTPRDLAVIFREALSRPVFAEITAEPTALFP 218

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL---GALDR 249
            +    +  N +  +  + GA G KTGFT A+    V +A +  + L+  ++    A   
Sbjct: 219 GDSGEDEIRNQDELLTLYPGALGGKTGFTNAARKTFVGAAERDGRRLVVSMMHGLNAPGG 278

Query: 250 NTRNKVSASLLSMGFY 265
            T    + +LL  GF 
Sbjct: 279 PTYWDQAQALLDWGFA 294


>gi|121610552|ref|YP_998359.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Verminephrobacter eiseniae EF01-2]
 gi|121555192|gb|ABM59341.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Verminephrobacter eiseniae EF01-2]
          Length = 372

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 95/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +S     +     ++D +T  V+           ASLTKLMT  ++          +   
Sbjct: 114 VSDPLALRSSVALVVDQDTNEVLLSKNDHAVLPIASLTKLMTGLLISQAK----LPMDEL 169

Query: 80  ITISKNA-SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +TI+++       S S    G+T+T    L L ++ S N  A A+  +       FV  M
Sbjct: 170 LTITQDDVDMEKGSRSRLTVGTTLTRGAMLHLALMASENRAAHALGRTYPGGLAAFVAQM 229

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG++ TH+    G+      +      +++        + +       +E+  K
Sbjct: 230 NAQARRLGMTDTHYAEPTGLSSRNQSSARDLATLVNVTHADPLLRELSTSPDYEVEVGRK 289

Query: 199 K--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y NTN  V       G  KTG+   +G  +V  A    + LI V L +  + +R   
Sbjct: 290 TLQYNNTNRLVKNPTWDIGLQKTGYISEAGRCLVMQAQVAGRKLIMVFLDSAGKFSRIAD 349

Query: 256 SASLLSM 262
           +  +   
Sbjct: 350 AERVRHW 356


>gi|239636745|ref|ZP_04677747.1| penicillin-binding protein 4 [Staphylococcus warneri L37603]
 gi|239598100|gb|EEQ80595.1| penicillin-binding protein 4 [Staphylococcus warneri L37603]
          Length = 429

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 77/353 (21%), Positives = 133/353 (37%), Gaps = 51/353 (14%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIAE--------------------TNKLPYYTLLDTNTG 39
           M++   +II M  + NI    + AE                      +      +  + G
Sbjct: 1   MKRIFKLIITMFFVLNIITPFANAENGDVTPVQVAIDNGYSKVTEAYQPESAINVSQD-G 59

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNST 95
            ++ E   D  W PAS+TKLMT Y+    +K+KK  L   + I+    +       SN+ 
Sbjct: 60  QILYEYNKDKVWYPASMTKLMTMYLTLEAVKDKKLSLNDEVKITDREYQMSTLPELSNTK 119

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
              G   T+ + L++ +  S+N  A+ + E +      F   MN  +K LG+  TH++N 
Sbjct: 120 LYPGQKWTISDLLQITVSNSSNAAALILGEQVSGNVNDFTDLMNKKAKELGMKDTHYVNP 179

Query: 156 HGVVQ--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            G                     TTARD AIL   +  + P+ +H+ +       G  Y 
Sbjct: 180 TGAENARLKSFAPSKYKKTENTTTTARDYAILDQHVINETPKILHFTKQLAPTTHGVTYY 239

Query: 202 NTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNT 251
             N +      +  G DG+KTG +  + +N   +  +    +  VILGA D         
Sbjct: 240 TFNHSLDGADMSLPGTDGLKTGSSDTADYNHTITTKRNGFRINQVILGAGDYKHIGGEKQ 299

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           RN +  +L+   F      K ++   K            ++ + +     +  
Sbjct: 300 RNMMGNALMERSFSQYKYEKILSKG-KHQINGKTYYVEQDLYDVLPKDFTKKD 351


>gi|282934688|ref|ZP_06339931.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           208-1]
 gi|281301263|gb|EFA93564.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           208-1]
          Length = 395

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 126/372 (33%), Gaps = 42/372 (11%)

Query: 1   MRQF-----------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           MR+F           L II +  L+      +  +   +    ++D  TG ++ +     
Sbjct: 1   MRRFRDKLKIAWLVALCIIGIINLTFFNVVKADEKPVNVKAAFMMDEKTGQILYQKNATR 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +  ASLTK++T  V+   + + K      I ISK+ ++                   ++
Sbjct: 61  KYAVASLTKILTLAVIMEDIHKHKLDWDQEIQISKDVAKVADDWRFSNVPLIYNERYTVR 120

Query: 110 LLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            LI       A    E    +   +   F   M   +K  G+      N  G+       
Sbjct: 121 SLIESMMIVSADGSTEALALADAGSVAAFNYKMKVVAKRAGVKNPEIYNMIGLSNGELGN 180

Query: 159 -------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      +  +A+DMA++S  +   +P+ ++  + K    K  +          ++
Sbjct: 181 LKLPKIDDNQENQFSAKDMALISKYLIDKYPEVLNITKTKYANFKISQDNEIKMENIIYM 240

Query: 212 -----------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-RNKVSASL 259
                        DG+KTG T A+G+  V +    ++ +I V+L      + +   + ++
Sbjct: 241 LEGMGYGPKKGTMDGLKTGKTDAAGYCYVGTGTFDNRRVITVVLDVPGEYSNQFIQTNNM 300

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           +   F      K IN        Q ++       +++    +          +     S 
Sbjct: 301 IDTVFDKYQLVK-INKNNLPKKYQKITITSKKQKKKISVVPETDSALWLAKDQKLANLSP 359

Query: 320 FIDFEKITLLKN 331
            ++ +K   LK 
Sbjct: 360 KLEVKKQNKLKK 371


>gi|312961792|ref|ZP_07776290.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas fluorescens WH6]
 gi|311284051|gb|EFQ62634.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas fluorescens WH6]
          Length = 307

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 102/277 (36%), Gaps = 18/277 (6%)

Query: 1   MRQFLVIIAMAMLSN----------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           M+  L I+++               + P              L+D  T  VI  + PD  
Sbjct: 1   MKIRLSIVSLFFAFTGTFAHAAESTLAPRDPSKLQIASGSAMLVDLQTNKVIYASNPDVV 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS++KLMT  +V    +     +   IT +          S  K GS M     L +
Sbjct: 61  VPIASVSKLMTGLIVLEAKQNMDEYIDINITDTPE---MKGVFSRVKIGSQMPRKEMLLI 117

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
            ++ S N  A ++A         F+  MN  +K LG+++TH++   G+  H   T     
Sbjct: 118 ALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLS 177

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASG 225
            +L++  K      +   + K +  +   Y        +            KTGFT  +G
Sbjct: 178 KLLAYARKFPMLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRANWDIKLTKTGFTNQAG 237

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +V     G++ +  VIL A  + T    ++ + S 
Sbjct: 238 HCLVLVTSMGNRPVSLVILDAFGKFTHFADASRIRSW 274


>gi|301024377|ref|ZP_07188066.1| beta-lactamase [Escherichia coli MS 196-1]
 gi|299880474|gb|EFI88685.1| beta-lactamase [Escherichia coli MS 196-1]
          Length = 291

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|297587950|ref|ZP_06946594.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ATCC 53516]
 gi|297574639|gb|EFH93359.1| possible serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ATCC 53516]
          Length = 394

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 78/352 (22%), Positives = 155/352 (44%), Gaps = 20/352 (5%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+  + ++ + + +     P LS A       NK+  Y  ++ +    +     + P+  
Sbjct: 1   MKSIKKIIPLMLILAIVFQPALSKADSKLGFENKVNSYYTIEQDYSQELLNYNENKPYAI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTK+MT  +V   +   K  L   I I    ++   S    KKG  +T+++ ++ +++
Sbjct: 61  ASLTKIMTYVLVMEDINANKYKLDDKIKIQTQYAKPEASTMQLKKGEEVTVNDLIRGMMI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMA 171
            S ND A  +A     +  KFV+ MN  +  L L +  F +A G       +  +A+D+A
Sbjct: 121 VSGNDAADELAVKSEGSVAKFVERMNKKAAELELESAKFYSASGYPENDKENMMSAKDLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PNTNWAVGTFLGADGMKTGFTCASGFNIV 229
            L+     ++PQ ++Y + + L +  +KY    T   +G   G DG KTG T  +G+ ++
Sbjct: 181 KLTTYTINNYPQVLNYTKTQKLSMPSRKYEGVTTVPFLGKIEGVDGFKTGTTEKAGYCLI 240

Query: 230 ASA----IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
            +        +  +++V++GA  +  RN     +L     +      +N   +   +   
Sbjct: 241 TTMSLKPNNPNNKVVSVLMGAPTKYDRNTYQKIILEYVRNSFEPINILNS--EKPIETKS 298

Query: 286 SNEVPNISEEVCTTQKEIINYNTQM---KEAKDKESHFIDFEKITLLKNKIT 334
            N V + + E+  T+   I YNT+    ++   K+      +K  ++   + 
Sbjct: 299 VNSVVDKNVEIYPTEDVSILYNTKTGLQQKVDIKKDLKAPLKKGQIVGKVVI 350


>gi|295090182|emb|CBK76289.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cf.
           saccharolyticum K10]
          Length = 352

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 11/239 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E    PY  L+D ++G V+ E        PASLTK+MTA +     ++ + ++  P  I 
Sbjct: 89  ENLYSPYAILVDLDSGTVLKEKNSTDRIYPASLTKIMTAILAIENTEDLEEIVQLPDEIF 148

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                   S + F+ G  + L + L  +++ S  +  +A A+ +  +E++FV  MN+ ++
Sbjct: 149 PPLYAQNASMAGFQPGEEVRLKDLLYGVLIPSGAECCLAFADRISGSEEEFVSLMNDKAQ 208

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG----------- 192
            LG+  THF N+ G+    HY+T  D++IL      +      +   +            
Sbjct: 209 ELGMKNTHFTNSTGLHDPEHYSTVEDISILLQYALKNEYFRDVFTSSRYSTLPSEQHPEG 268

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  +   +    T     G KTG+T  +G  + + A    +  I V   A   + 
Sbjct: 269 FTFHSTMFKYMDSTEVTGGEILGGKTGYTEEAGLCLASLAQVNGKEYILVTAKANGTHQ 327


>gi|229591365|ref|YP_002873484.1| D-alanyl-D-alanine endopeptidase [Pseudomonas fluorescens SBW25]
 gi|229363231|emb|CAY50317.1| penicillin-binding protein 7 precursor [Pseudomonas fluorescens
           SBW25]
          Length = 307

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/277 (20%), Positives = 101/277 (36%), Gaps = 18/277 (6%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLP------YYTLLDTNTGHVIAENYPDHP 50
           M+  L II++              + A  +            L+D  T  VI  + PD  
Sbjct: 1   MKIRLSIISLFFAFTGNFTHAAETTQAPRDTSKLQIASGSAMLVDLQTNKVIYSSNPDVV 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS++KLMT  +V    +     +   IT +          S  K GS M     L +
Sbjct: 61  VPIASVSKLMTGLIVLEAKQNMDEYIDINITDTPE---MKGVFSRVKIGSQMPRKEMLLI 117

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
            ++ S N  A ++A         F+  MN  +K LG+++TH++   G+  H   T     
Sbjct: 118 ALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLS 177

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASG 225
            +L+          +   + K +  +   Y        +            KTGFT  +G
Sbjct: 178 KLLAAARHYPLLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRANWDIKLTKTGFTNQAG 237

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +V     G++ +  VIL A  + T    ++ + + 
Sbjct: 238 HCLVLVTSMGNRPVSLVILDAFGKFTHFADASRIRNW 274


>gi|161502683|ref|YP_001569795.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864030|gb|ABX20653.1| hypothetical protein SARI_00730 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 315

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/280 (23%), Positives = 105/280 (37%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F        L    PF   A                     ++D NT  VI  N+PD
Sbjct: 1   MLKFRASFLSLALMLAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTHKVIYSNHPD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TKLMTA VV         +L   I+ +          S  +  S ++  N L
Sbjct: 61  LVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGVYSRVRLNSEISRKNML 117

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A         F++ MN  +K LG++ T F+   G+    + +TAR
Sbjct: 118 LLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTAR 176

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 177 DLTKLLIATKQYPLIGQLSITREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276


>gi|254557717|ref|YP_003064134.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           JDM1]
 gi|254046644|gb|ACT63437.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           JDM1]
          Length = 444

 Score =  122 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 138/377 (36%), Gaps = 45/377 (11%)

Query: 1   MRQFLVIIAMAMLSN----------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           +++ ++ +  A+  +          +    +   +        +D +TG ++ +     P
Sbjct: 7   LKKVMIALVAAVTFSTAGLGIAGADLQAQAASTPSISAKAAIAVDASTGQILYDKNSSKP 66

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS+TK+++ Y+V   + E K      I++SK  ++   +          T   +++ 
Sbjct: 67  MAIASMTKMLSTYLVLKAIHEDKLSWNQKISVSKAVAKMSQNTEYANVPLLSTKTYSVRQ 126

Query: 111 LIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----- 161
           L       SAN    A+ +++  T  KFV  M  T+K+ G++    +NA G+        
Sbjct: 127 LYNATEIYSANAAITALGDAVAGTPHKFVSLMRKTAKSWGITDATIINASGLTNKEVGST 186

Query: 162 ----------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA 206
                      +  +A+D+A ++ ++ +D+P+ +    I     +       K  N N+ 
Sbjct: 187 IGYSNVAASAENEMSAQDVATVAQKLLSDYPEVLKTSSIAHAWFEKGTSSATKMDNRNYM 246

Query: 207 ------VGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGA----LDRNTRNKV 255
                   + L  DG+KTG +  +G     +        +I V++ A         R   
Sbjct: 247 LKGLVKHYSALPVDGLKTGTSTKAGNAFTGTVKFSNGNRIITVVMHAGAANDSGTERFTQ 306

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           +A ++S  ++N T          +  +     +  +++ ++ +       Y     +A  
Sbjct: 307 TAEIMSYVYHNYTTTTINKNGKINGVKAVDVQDGKSLTSQLVSNSGATKIYLPTGTDASA 366

Query: 316 KESHFIDFEKITLLKNK 332
                   +  T     
Sbjct: 367 VTGKVSLKKSATTDGKL 383


>gi|260221036|emb|CBA29200.1| D-alanyl-D-alanine endopeptidase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 310

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 10/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   K     ++D +T  V+     +     AS+TKLMT  VV       +  +   I I
Sbjct: 44  ALDLKSSVAFVVDQDTKEVLFSKNENAVLPIASITKLMTGVVVSEA----RLSMDETIEI 99

Query: 83  SK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           ++ +      S+S  + G+ ++    L L ++ S N  A A+  +     + FV  MN  
Sbjct: 100 TQADVDTEKGSSSRLRVGTELSRGELLHLALMASENRAAHALGRTFPGGLQHFVGLMNQK 159

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE---IKGK 198
           ++ LG++ T ++   G+    + ++A+D+A L     +D                  +  
Sbjct: 160 ARILGMTDTQYVEPTGL-NSRNQSSAKDLATLVNYAYSDATLRELSTSTGYQVEVGNRTL 218

Query: 199 KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +Y NTN  V       G  KTG+   +G  +V  A    + LI V L +  + TR   + 
Sbjct: 219 QYNNTNRLVKNPAWEIGLQKTGYITEAGQCLVMQAKIAGRKLIMVFLDSAGKLTRIADAE 278

Query: 258 SLLSM 262
            +   
Sbjct: 279 RVRKW 283


>gi|302520562|ref|ZP_07272904.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
 gi|302429457|gb|EFL01273.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
          Length = 308

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 59/291 (20%), Positives = 115/291 (39%), Gaps = 19/291 (6%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +          + A +       LLDT++G  +     D     AS TK+MTA VV    
Sbjct: 21  LVAPLVGTAQAASAPSVSAKGAFLLDTSSGKTLYSKAADTKRQMASTTKVMTATVVLDTK 80

Query: 70  KEKKAMLTTPITISKNASEYPPSNS-TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                   T     ++      +++   + G  +T+   L   ++ S  D A A+A++  
Sbjct: 81  GLNLDKKITIKQAYRDYVVKKGASTSDLRTGDKVTVRQLLYATLLPSGCDAAYALADTFG 140

Query: 129 KTEKK------FVQHMNNTSKNLGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKT-- 179
             +        F+  MN  +K+L +  T + +  G+     +YTT RD ++L+       
Sbjct: 141 TGKTASARTANFISKMNAKAKSLKMKNTSYDSFDGIPTKSKNYTTPRDASLLARHALKSS 200

Query: 180 ------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                               + +   + NTN  +G++ GA G+KTG    SG  +V +A 
Sbjct: 201 TFRTVVKSKSTKQKATASNGKSRTYTWYNTNKLLGSYKGAIGIKTGTASGSGPCLVFAAT 260

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           +  +++  VIL     + R + +A ++   F + + +      +    Q++
Sbjct: 261 RNGKTVAGVILN---DSKRFEDAAKIMDYAFKSNSAKTMKLQALPKGAQKD 308


>gi|108798929|ref|YP_639126.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           sp. MCS]
 gi|119868044|ref|YP_937996.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           sp. KMS]
 gi|108769348|gb|ABG08070.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           sp. MCS]
 gi|119694133|gb|ABL91206.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           sp. KMS]
          Length = 264

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 12/259 (4%)

Query: 11  AMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           A L+   P  ++A        + L D ++G V+A   P  P  PAS  K++ A VV    
Sbjct: 14  AALAQPQPAGAVALPEGPAQAWLLADLDSGRVLASRNPYEPHAPASTIKVLLAMVVLDH- 72

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                        +++ +E   S      G   T    L  L++ S ND A  +A+ +  
Sbjct: 73  ----LSPDNFARANRSHTEVECSCVGLTPGQPYTTRQLLSALLMVSGNDAANMLAD-MLG 127

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHY 187
            ++  V  MN  +  +G  +T   +  G+        TT  D+A++       +P     
Sbjct: 128 GQRAAVAAMNRKAALVGAKSTRASSPSGLDGPGWESITTPHDLAVMLRAAL-KYPLIAQI 186

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +       GK   N N  +  + G    KTGFT  +    V +A +G++ L  V +   
Sbjct: 187 MRSPTAPFPGKTLTNQNELLSRYPGDIAGKTGFTNLARKTYVGAAQRGNRRLAVVQMYGT 246

Query: 248 DRNTRNKVSASLLSMGFYN 266
                   +  L   GF  
Sbjct: 247 G--DLYGQAIGLFDYGFSQ 263


>gi|120597728|ref|YP_962302.1| D-alanyl-D-alanine endopeptidase [Shewanella sp. W3-18-1]
 gi|146294135|ref|YP_001184559.1| D-alanyl-D-alanine endopeptidase [Shewanella putrefaciens CN-32]
 gi|120557821|gb|ABM23748.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella sp. W3-18-1]
 gi|145565825|gb|ABP76760.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           putrefaciens CN-32]
 gi|319427478|gb|ADV55552.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           putrefaciens 200]
          Length = 322

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 58/276 (21%), Positives = 98/276 (35%), Gaps = 12/276 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D  T  V+  + P+     AS+TKLMTA V           L   I+ +
Sbjct: 51  QEVAANSALVVDLKTNEVLYSSNPNAVMPIASVTKLMTAMVTLDAKLPMDQKLAVNISDT 110

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K         S  + GS +T    L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 111 KE---MRGVYSRVRIGSEITRKEMLLLTLMSSENRAAASLAHHYPGGHKAFIKAMNAKAK 167

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
            LG+  T ++   G+      + +  + +L    K      +   + K +     KY   
Sbjct: 168 ALGMKNTRYVEPTGLSHKNVSSASDLIVLLKASEKYPMLGELSATEKKTVTFGKPKYSLD 227

Query: 201 -PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             NTN  V          KTGFT A+G  +V       + +  V+L A  + T    +  
Sbjct: 228 FRNTNRLVYKDNWNIHLTKTGFTNAAGHCLVMRTEMAKRQVAFVVLDAYGKYTHLADANR 287

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           L +         K      +    +   +       
Sbjct: 288 LRNW----LETGKVTPIPTEAKQYKKQRSTQQIAKV 319


>gi|237732182|ref|ZP_04562663.1| D-alanyl-D-alanine endopeptidase [Citrobacter sp. 30_2]
 gi|226907721|gb|EEH93639.1| D-alanyl-D-alanine endopeptidase [Citrobacter sp. 30_2]
          Length = 314

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 97/245 (39%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS+TKLMTA VV          L   I+ +
Sbjct: 35  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEKLKVDISQT 94

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A         F++ MN  +K
Sbjct: 95  PE---MKGIYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYNAFIKAMNAKAK 151

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
            LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 152 ALGMTQTRFVEPTGL-SIHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFANPAYTL 210

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 211 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 270

Query: 258 SLLSM 262
            L + 
Sbjct: 271 RLRTW 275


>gi|213964906|ref|ZP_03393105.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium amycolatum
           SK46]
 gi|213952442|gb|EEB63825.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium amycolatum
           SK46]
          Length = 325

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 17/292 (5%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            +      +T+ D  +G V+A   P   + PAS+ K++ A             L TP+  
Sbjct: 15  PKDLSASAWTVFDLKSGDVLAAKDPHGRYRPASIIKVLLAMEALE-----DLKLDTPVKA 69

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           +   +    S     +    +++  L  L++ S ND   A+A  L     K  + +N  +
Sbjct: 70  TFEDANMEGSRVGIVEDVNYSVETLLTGLLLNSGNDTGHALAREL-GGMDKTTEKVNALA 128

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-------HYFQIKGLEI 195
           K LG + T  +N  G+   G  T+A DM++       +                 K LE+
Sbjct: 129 KKLGATDTRVVNPTGLDAPGQMTSAYDMSLFFQHAFNNETYRKLSATRLATIPGDKALEV 188

Query: 196 KGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--ALDRNTR 252
              +  N N  +   + GA G KTGFT  +       A +  + L  V+L     D    
Sbjct: 189 DDFEIANDNQLIAQDYPGALGGKTGFTDDARHTFAGVAERDGRRLGVVVLDVTVEDSPRA 248

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
            + +ASLL  GF    +   +  +       NL+ ++P+I E+  T     I
Sbjct: 249 WQQAASLLDAGF-KAPEGSSVGVLEASTKDDNLAEKLPDILEDESTGTGLKI 299


>gi|194334807|ref|YP_002016667.1| Serine-type D-Ala-D-Ala carboxypeptidase [Prosthecochloris
           aestuarii DSM 271]
 gi|194312625|gb|ACF47020.1| Serine-type D-Ala-D-Ala carboxypeptidase [Prosthecochloris
           aestuarii DSM 271]
          Length = 317

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 25/279 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIAET----------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +  +   ++   FP  SIAE             +  Y L D     V+ E  P     PA
Sbjct: 18  MTAVFACLMFFCFPVPSIAEPHAKDSLKVEPLDIASYILKDIGRSTVLLEKDPGTRHEPA 77

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK++T  +     +     L   +TI   A++  P+ + F  G  + L + +K  +VK
Sbjct: 78  SLTKILTCIIAIESAR-----LNEFVTIPLEATQVEPTKAGFLPGEKIRLLDLVKAAMVK 132

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH---GHYTTARDMA 171
           S+ND A AIA  L  + + F   MN  +  LGLS + F N  G  +H   GHY+TA DM 
Sbjct: 133 SSNDAAFAIAIHLGGSVQGFAAMMNAKAAELGLSHSCFTNPAGFDRHQYVGHYSTAGDML 192

Query: 172 ILSWRIKTDFPQYM-----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            L+     +               +    K  +   +N  +  +  A G+KTG+T  +G 
Sbjct: 193 RLTEYAIGNQIFNYIAGLDEVSITEKRSGKIYRLKTSNKLLHRYPYAVGIKTGYTFRAGK 252

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            ++A A +GD+ ++ V+L A  R  R  V+  L    F 
Sbjct: 253 CLIARAKKGDRDVVLVMLNA--RLDRWSVAEELFEKAFS 289


>gi|295676949|ref|YP_003605473.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1002]
 gi|295436792|gb|ADG15962.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1002]
          Length = 404

 Score =  122 bits (305), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 95/246 (38%), Gaps = 6/246 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS+TKLMTA VV    +         
Sbjct: 142 TPDALMLRSSVAYVIDQNSGETLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQI 198

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 199 EVTDEDRDYEKNTGSRLAVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFLAAMN 258

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K LG++ THF N  G+      +    + +++   +    +         +    + 
Sbjct: 259 AKAKQLGMNDTHFENPTGLTSMNVSSARDLVKMVNAAYQYPLIRKFSTDHSYEVYTGKRT 318

Query: 200 --YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             Y +TN  V       G  KTGF   +G  +V  A    + +I V+L +  + +R   +
Sbjct: 319 LAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQATIHGRPMILVLLDSSGKYSRFADA 378

Query: 257 ASLLSM 262
             L + 
Sbjct: 379 TRLRTW 384


>gi|295098157|emb|CBK87247.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 307

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 12/246 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  ++PD     AS+TK+MTA VV       +  L   + + 
Sbjct: 37  PQIASGSAMIVDLNTNKVIYASHPDLVRPIASITKVMTAMVVLDA----RLPLDEKLKVD 92

Query: 84  -KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
             +  E     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +
Sbjct: 93  ISHTPEMKGIYSRVRLNSEISRKNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKA 152

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKG 197
           K LG+  THF+   G+    + +TARD+  L      + +                    
Sbjct: 153 KALGMKNTHFVEPTGL-SIHNVSTARDLTKLLIASKQYPLIGQLSTTREEMATFSNPAYT 211

Query: 198 KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             + NTN  V          KTGFT A+G  +V   +   + +  V++ A  + T    +
Sbjct: 212 LPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVFNGKPVALVVMDAFGKYTHFADA 271

Query: 257 ASLLSM 262
           + L + 
Sbjct: 272 SRLRTW 277


>gi|193070497|ref|ZP_03051437.1| penicillin-binding protein 7 [Escherichia coli E110019]
 gi|192956191|gb|EDV86654.1| penicillin-binding protein 7 [Escherichia coli E110019]
 gi|315615372|gb|EFU96004.1| D-alanyl-D-alanine endopeptidase [Escherichia coli 3431]
 gi|332765942|gb|EGJ96152.1| penicillin-binding protein 7 [Shigella flexneri 2930-71]
 gi|333016619|gb|EGK35948.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri K-304]
          Length = 297

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|253701878|ref|YP_003023067.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacter sp.
           M21]
 gi|251776728|gb|ACT19309.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Geobacter sp.
           M21]
          Length = 276

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 14/256 (5%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +      +   + +     P   L+    GH+  E        PASLTK+MTA +V    
Sbjct: 5   ILFAVAYYTDAASSPFAHPPSAYLI-QVNGHIYKERNAHIRRPPASLTKIMTALIVMERC 63

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           K     L   + +S+ A+    S    ++G  +T+ + L   ++ SAND   A+A+  C 
Sbjct: 64  K-----LDEVVVVSRGAARETGSRIGLRRGEKLTVRDLLAATLMASANDACRALADHACG 118

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----Y 184
            ++ FV  MN  ++ L L  T F NA G    G YTTA D+A+L+ +             
Sbjct: 119 NQRDFVVQMNARARALQLPNTRFTNACGHDSAGLYTTAHDLALLTEKAMQKPLFAELVAR 178

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                      +     N N  +G + GA G+KTG T  +G  +VA A + ++ ++ VI+
Sbjct: 179 KEMRIRTLNSKRSYYLRNKNRLIGRYPGAIGVKTGTTPNAGQCLVAIAEREERKVLLVIM 238

Query: 245 GALDRNTRNKVSASLL 260
            A     R  V+ ++L
Sbjct: 239 HA---RNRWWVAPAML 251


>gi|288934371|ref|YP_003438430.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Klebsiella
           variicola At-22]
 gi|288889100|gb|ADC57418.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Klebsiella
           variicola At-22]
          Length = 316

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 98/258 (37%), Gaps = 10/258 (3%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+        +           ++D  T  +I  + PD     AS+TK+MTA VV     
Sbjct: 24  ALAKTSAAVAASQPDIASGSAMIVDLATKKIIYASQPDLVRPMASITKVMTAMVVLDAHL 83

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               MLT  I+   +  E     S  +  S ++    L L ++ S N  A ++A      
Sbjct: 84  PMDEMLTVDIS---HTPEMKGIYSRVRLNSQISRRTMLLLALMSSENRAAASLAHHYPGG 140

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYM 185
              F++ MN  ++ LG++ T ++   G+    + +TARD+  L      + +        
Sbjct: 141 YDAFIRAMNAKAQALGMTHTRYVEPTGL-SVHNVSTARDLTKLLIASEQYPLIGQLSTTK 199

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                         + NTN  V          KTGFT A+G  ++   +     +  V++
Sbjct: 200 EETATFAHPAYSLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLIMRTVINQHPVALVVM 259

Query: 245 GALDRNTRNKVSASLLSM 262
            A  + T    ++ L + 
Sbjct: 260 DAFGKYTHFADASRLRTW 277


>gi|313890335|ref|ZP_07823967.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121321|gb|EFR44428.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 412

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/367 (16%), Positives = 133/367 (36%), Gaps = 32/367 (8%)

Query: 1   MRQFLVIIA-MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ + +I  +         L+             + +TG ++ E         ASL+K+
Sbjct: 1   MKKLVFLILPLLFCFLPKTILADDYKLPAKSGIAFEVSTGKILYEKNAKKTLPIASLSKI 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +T Y+V+  ++       TP+ IS            ++        T++  L  ++V +A
Sbjct: 61  LTTYLVYKEVQSGNLSWDTPVKISNYPYELTTNYSISNVPLDARQYTVEELLTAMLVTNA 120

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHG 162
           N  A+A+AE +  TE  FV  M    +   +     +NA G+                  
Sbjct: 121 NSPAIALAEKIAGTEPLFVDKMKKQLQEWKIHKADLVNASGLSNEQLGNHIYPNSQKDAE 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKT 218
           +  +A D+AI++  +  D+PQ +   +      +G +  + N+ +        GA+G+  
Sbjct: 181 NKMSALDLAIVTRHLLLDYPQVLELTKKPAATFRGDQIFSYNFLLEGMPNHRKGANGLFV 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKIN 274
            F+  +G +++ S+ +   S++++I+               + +LL            + 
Sbjct: 241 AFSENNGASLITSSTENKMSVVSIIINTEKSKDDKLAHFTTANTLLDNIAQKYEPVTLLE 300

Query: 275 YI-----IKDFYQQNLSNEVPNISEE-VCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                         +    +  IS++ +   QK      T +     ++      ++   
Sbjct: 301 KGQHLKNKDFPVTDSPMKHISLISDKTLTIIQKRGTTTTTDLVIRPLQKEFRAPIKQNQK 360

Query: 329 LKNKITK 335
           L     K
Sbjct: 361 LATASYK 367


>gi|167400236|ref|ZP_02305749.1| penicillin-binding protein 6 (D-alanyl-D-alaninecarboxypeptidase
           fraction C) (DD-peptidase) (DD-carboxypeptidase) (PBP-6)
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167050185|gb|EDR61593.1| penicillin-binding protein 6 (D-alanyl-D-alaninecarboxypeptidase
           fraction C) (DD-peptidase) (DD-carboxypeptidase) (PBP-6)
           [Yersinia pestis biovar Antiqua str. UG05-0454]
          Length = 231

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 6/191 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 32  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 91

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 92  TVGKDAWATGNPALRGSSLMFLKPGDRVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 151

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 152 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 211

Query: 195 IKGKKYPNTNW 205
               +  N N 
Sbjct: 212 FNKIRQTNRNR 222


>gi|77459922|ref|YP_349429.1| D-alanyl-D-alanine endopeptidase [Pseudomonas fluorescens Pf0-1]
 gi|77383925|gb|ABA75438.1| penicillin-binding protein 7 precursor [Pseudomonas fluorescens
           Pf0-1]
          Length = 312

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 105/281 (37%), Gaps = 22/281 (7%)

Query: 1   MRQFLVIIAMAMLSN---IFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENY 46
           M   L I+++    +   + P ++ AET   P              L+D  T  VI  + 
Sbjct: 1   MNIRLSILSLVFAFSGTLLTPTVNAAETTAAPRDASQLKIASGSALLMDLQTNKVIYSSN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           PD     AS++KLMT  VV    +     +   I+   +  E     S  K  S +    
Sbjct: 61  PDVVVPIASVSKLMTGLVVVEAHQNMDEWIDVDIS---HTPEMKGVFSRVKLRSELPRRE 117

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L + ++ S N  A ++A         F+  MN  +K LG+++THF+   G+ +    T 
Sbjct: 118 MLLIALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTSTHFVEPTGLSERNVSTA 177

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFT 221
                +L    K      +   + K +  +   Y        +            KTGFT
Sbjct: 178 RDLSKLLVAAHKQPLLIELTTTKEKTVSFRKPNYTLGFRNTDHLVNKADWDIRITKTGFT 237

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V      ++ +  VIL A  + T    ++ + S 
Sbjct: 238 NPAGHCLVLVTRMANRPVALVILDAFGKYTHFADASRIRSW 278


>gi|294629041|ref|ZP_06707601.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
 gi|292832374|gb|EFF90723.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
          Length = 425

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 20/276 (7%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAM 75
             ++        + L D  +G V+A         PAS  K++   T    F         
Sbjct: 41  TSALPARLTAQAWLLADWESGEVLAAYRAHERLAPASTLKMLFADTVLAKFPRTDRHTVT 100

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                 I + +S       T      +     L+          A      +     K V
Sbjct: 101 AADLADIPEGSSLVGIQPGTTYTVEQLWQGVFLRSGNDAVHVLAA------MNGGIAKTV 154

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY-------- 187
             M   + +L    TH ++  G    G  ++A D+ + +     +     +         
Sbjct: 155 AEMQARAADLQALDTHVVSPDGYDHPGQVSSAYDLTLFARHGLKNADFRGYCGTRAADFP 214

Query: 188 --FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
              +         +    +W + T+ G  G+K G+T  +G     +A++G ++L+  ++ 
Sbjct: 215 AGGKKTFQIQNTDRLLTGSWGLKTYDGMIGVKNGYTSHAGNTFTGAAVRGGRTLLVTVMH 274

Query: 246 -ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
            A   N   + SA+LL  GF      + +  ++   
Sbjct: 275 PAAGANAVYEESAALLDWGFAQGGAARAVGVLVDPL 310


>gi|253798001|ref|YP_003031002.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289553300|ref|ZP_06442510.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN 605]
 gi|297635529|ref|ZP_06953309.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732528|ref|ZP_06961646.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN R506]
 gi|313659860|ref|ZP_07816740.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN V2475]
 gi|253319504|gb|ACT24107.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289437932|gb|EFD20425.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN 605]
 gi|328457775|gb|AEB03198.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis KZN 4207]
          Length = 291

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+A    +    PAS  K++ A V           L + +   
Sbjct: 38  PDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDE-----LDLNSTVVAD 92

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              ++   +    K G + T    L  L++ S ND A  +A  +   +   V  MN  + 
Sbjct: 93  VADTQAECNCVGVKPGRSYTARQLLDGLLLVSGNDAANTLA-HMLGGQDVTVAKMNAKAA 151

Query: 144 NLGLSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            LG ++TH     G+   G    +TA D+ ++      +            +   +   +
Sbjct: 152 TLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRAAMANPVFAQITAEPSAMFPSDNGEQ 211

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTG+T A+    V +A +G + L+  ++         T    
Sbjct: 212 LIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAMMYGLVKEGGPTYWDQ 271

Query: 256 SASLLSMGFY 265
           +A+L   GF 
Sbjct: 272 AATLFDWGFA 281


>gi|219558934|ref|ZP_03538010.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T17]
 gi|260202046|ref|ZP_05769537.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           tuberculosis T46]
 gi|289444466|ref|ZP_06434210.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T46]
 gi|289571098|ref|ZP_06451325.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T17]
 gi|289417385|gb|EFD14625.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T46]
 gi|289544852|gb|EFD48500.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T17]
          Length = 291

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+A    +    PAS  K++ A V           L + +   
Sbjct: 38  PDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDE-----LDLNSTVVAD 92

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              ++   +    K G + T    L  L++ S ND A  +A  +   +   V  MN  + 
Sbjct: 93  VADTQAECNCVGVKPGRSYTARQLLDGLLLVSGNDAANTLA-HMLGGQDVTVAKMNAKAA 151

Query: 144 NLGLSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            LG ++TH     G+   G    +TA D+ ++      +            +   +   +
Sbjct: 152 TLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRAAMANPVFAQITAEPSAMFPSDNGEQ 211

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTG+T A+    V +A +G + L+  ++         T    
Sbjct: 212 LIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAMMYGLVKEGGPTYWDQ 271

Query: 256 SASLLSMGFY 265
           +A+L   GF 
Sbjct: 272 AATLFDWGFA 281


>gi|15842454|ref|NP_337491.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium tuberculosis
           CDC1551]
 gi|31794087|ref|NP_856580.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium bovis AF2122/97]
 gi|57117035|ref|YP_177914.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium tuberculosis
           H37Rv]
 gi|121638792|ref|YP_979016.1| putative D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148662755|ref|YP_001284278.1| putative D-alanyl-D-alanine carboxypeptidase DacB2 [Mycobacterium
           tuberculosis H37Ra]
 gi|148824100|ref|YP_001288854.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis F11]
 gi|167969540|ref|ZP_02551817.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis H37Ra]
 gi|215404885|ref|ZP_03417066.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis 02_1987]
 gi|215412754|ref|ZP_03421466.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215428352|ref|ZP_03426271.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T92]
 gi|215431859|ref|ZP_03429778.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis EAS054]
 gi|218754664|ref|ZP_03533460.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|224991284|ref|YP_002645973.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|254233002|ref|ZP_04926329.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis C]
 gi|254365550|ref|ZP_04981595.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254551983|ref|ZP_05142430.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260187930|ref|ZP_05765404.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           tuberculosis CPHL_A]
 gi|260206229|ref|ZP_05773720.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           tuberculosis K85]
 gi|289448576|ref|ZP_06438320.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289575616|ref|ZP_06455843.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis K85]
 gi|289746710|ref|ZP_06506088.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis 02_1987]
 gi|289751576|ref|ZP_06510954.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T92]
 gi|289755023|ref|ZP_06514401.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis EAS054]
 gi|289763087|ref|ZP_06522465.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|294993993|ref|ZP_06799684.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           tuberculosis 210]
 gi|298526380|ref|ZP_07013789.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777199|ref|ZP_07415536.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu001]
 gi|306789785|ref|ZP_07428107.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu004]
 gi|306794599|ref|ZP_07432901.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu005]
 gi|306798842|ref|ZP_07437144.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu006]
 gi|306804688|ref|ZP_07441356.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu008]
 gi|306968979|ref|ZP_07481640.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu009]
 gi|306973316|ref|ZP_07485977.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu010]
 gi|307081024|ref|ZP_07490194.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu011]
 gi|307085623|ref|ZP_07494736.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu012]
 gi|308369897|ref|ZP_07419443.2| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308371173|ref|ZP_07424068.2| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308375921|ref|ZP_07445548.2| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu007]
 gi|7477960|pir||B70928 probable dacB protein - Mycobacterium tuberculosis (strain H37RV)
 gi|13882758|gb|AAK47305.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium tuberculosis
           CDC1551]
 gi|31619682|emb|CAD96622.1| PROBABLE D-ALANYL-D-ALANINE CARBOXYPEPTIDASE DACB2
           (PENICILLIN-BINDING PROTEIN) (DD-PEPTIDASE)
           (DD-CARBOXYPEPTIDASE) (PBP) (DD-TRANSPEPTIDASE)
           (SERINE-TYPE D-ALA-D-ALA CARBOXYPEPTIDASE)
           [Mycobacterium bovis AF2122/97]
 gi|41352764|emb|CAE55530.1| PROBABLE D-ALANYL-D-ALANINE CARBOXYPEPTIDASE DACB2
           (PENICILLIN-BINDING PROTEIN) (DD-PEPTIDASE)
           (DD-CARBOXYPEPTIDASE) (PBP) (DD-TRANSPEPTIDASE)
           (SERINE-TYPE D-ALA-D-ALA CARBOXYPEPTIDASE) (D-AMINO ACID
           HYDROLASE) [Mycobacterium tuberculosis H37Rv]
 gi|121494440|emb|CAL72921.1| probable D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|124602061|gb|EAY61071.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis C]
 gi|134151063|gb|EBA43108.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148506907|gb|ABQ74716.1| putative D-alanyl-D-alanine carboxypeptidase DacB2 [Mycobacterium
           tuberculosis H37Ra]
 gi|148722627|gb|ABR07252.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis F11]
 gi|224774399|dbj|BAH27205.1| putative D-alanyl-D-alanine carboxypeptidase [Mycobacterium bovis
           BCG str. Tokyo 172]
 gi|289421534|gb|EFD18735.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289540047|gb|EFD44625.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis K85]
 gi|289687238|gb|EFD54726.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis 02_1987]
 gi|289692163|gb|EFD59592.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T92]
 gi|289695610|gb|EFD63039.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis EAS054]
 gi|289710593|gb|EFD74609.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|298496174|gb|EFI31468.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308214481|gb|EFO73880.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu001]
 gi|308326092|gb|EFP14943.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308329656|gb|EFP18507.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308333795|gb|EFP22646.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308337189|gb|EFP26040.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308340920|gb|EFP29771.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu006]
 gi|308344832|gb|EFP33683.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308348780|gb|EFP37631.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308353481|gb|EFP42332.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308357346|gb|EFP46197.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308361230|gb|EFP50081.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu011]
 gi|308364850|gb|EFP53701.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis SUMu012]
 gi|323718521|gb|EGB27692.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis CDC1551A]
 gi|326904525|gb|EGE51458.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis W-148]
          Length = 291

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 95/250 (38%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+A    +    PAS  K++ A V           L + +   
Sbjct: 38  PDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDE-----LDLNSTVVAD 92

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              ++   +    K G + T    L  L++ S ND A  +A  +   +   V  MN  + 
Sbjct: 93  VADTQAECNCVGVKPGRSYTARQLLDGLLLVSGNDAANTLA-HMLGGQDVTVAKMNAKAA 151

Query: 144 NLGLSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            LG ++TH     G+   G    +TA D+ ++      +            +   +   +
Sbjct: 152 TLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRAAMANPVFAQITAEPSAMFPSDNGEQ 211

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTG+T A+    V +A +G + L+  ++         T    
Sbjct: 212 LIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAMMYGLVKEGGPTYWDQ 271

Query: 256 SASLLSMGFY 265
           +A+L   GF 
Sbjct: 272 AATLFDWGFA 281


>gi|160900293|ref|YP_001565875.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Delftia
           acidovorans SPH-1]
 gi|160365877|gb|ABX37490.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Delftia
           acidovorans SPH-1]
          Length = 365

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 10/249 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            ++     K     +LD +T  V+           ASLTKLMT  ++          +  
Sbjct: 104 AVADPLDLKSSVALVLDQDTHEVLLSKNDHAVLPIASLTKLMTGLLISQA----HLPMDE 159

Query: 79  PITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI+++  +    S+S    G+T+T    L L ++ S N  A A+  +       FVQ 
Sbjct: 160 AITITQDDVDTEKGSSSRLAVGTTLTRGEMLHLALMSSENRAAHALGRTFPGGLDAFVQQ 219

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN  ++ LG++ T ++   G+      ++ARD+A+L     +D     +           
Sbjct: 220 MNAKARLLGMTDTRYVEPTGLSSRNQ-SSARDLAVLVNVAHSDPLVREYTTSPGYEVAVG 278

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +  +Y NTN  V +     G  KTG+   +G  +V  A    + +I V L +  + +R 
Sbjct: 279 RRTLQYNNTNRLVMSPTWDIGLQKTGYISEAGRCLVMQAQVAGRKIIMVFLDSAGKFSRL 338

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 339 GDAERVRHW 347


>gi|313113074|ref|ZP_07798708.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624612|gb|EFQ07933.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 427

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 123/332 (37%), Gaps = 16/332 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE---KKAM 75
            + I   ++     L + +TG  I     D     ASLTKLMTA ++    K+   +  +
Sbjct: 32  PMPIQTASETEAVYLFNADTGKTILNQNADQQQYVASLTKLMTALLLLESGKDLNGEVTV 91

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
            T      ++      +    + G T+   + L  +++ SAND A  IA  +  +   FV
Sbjct: 92  PTALTQEFRDIQNANGTTMGLRIGETVRRIDLLNAMLIVSANDAASVIAYDVGGSVLDFV 151

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------HYFQ 189
           + MN  ++ LG + T+F  AHG+  +G+ +TA+D+A ++     +           +   
Sbjct: 152 KQMNVRAQELGCTGTNFTCAHGLFDYGNVSTAQDLAKIAAACAANQTFAQVAGTASYVLP 211

Query: 190 IKGLEIKGKKYPNTNWAV-----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              L        ++N  +             +K GFT  +G  IVA A +   +   VIL
Sbjct: 212 ATNLRKAEHTISSSNSLMNSESANYREYVRWVKGGFTTLAGRCIVAFAEKDGHTYGLVIL 271

Query: 245 GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS-NEVPNISEEVCTTQKEI 303
           G    +        L    F +  DR  ++   +            P ++          
Sbjct: 272 GCDTPDHLFAECDDLFDWAFASFADRPLVDTQTEITTVALTKCRTEPTVALYAAAPVSGY 331

Query: 304 INYNTQMKEA-KDKESHFIDFEKITLLKNKIT 334
            + +  +  +    ES     +  +++     
Sbjct: 332 GHADDIVTYSFDLPESIAATVKSGSVVGTATV 363


>gi|170694729|ref|ZP_02885880.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           graminis C4D1M]
 gi|170140360|gb|EDT08537.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           graminis C4D1M]
          Length = 394

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS+TKLMTA VV    +         
Sbjct: 132 TPDALMLRSSVAYVVDQNTGESLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQL 188

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 189 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFLAAMN 248

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG++ THF N  G+    + ++ARD+  +                       GK+
Sbjct: 249 AKARQLGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPLIRRFSTDRSYEVYTGKR 307

Query: 200 ---YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A    + ++ V+L +  + +R   
Sbjct: 308 TLAYNSTNALVRNPTWEIGLQKTGFINEAGECLVMQANIHGRPMVLVLLDSSGKYSRFAD 367

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 368 ATRLRTW 374


>gi|256851221|ref|ZP_05556610.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 27-2-CHN]
 gi|260660645|ref|ZP_05861560.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 115-3-CHN]
 gi|297206087|ref|ZP_06923482.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii JV-V16]
 gi|256616283|gb|EEU21471.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548367|gb|EEX24342.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii 115-3-CHN]
 gi|297149213|gb|EFH29511.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           jensenii JV-V16]
          Length = 397

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 126/372 (33%), Gaps = 42/372 (11%)

Query: 1   MRQF-----------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           MR+F           L II +  L+      +  +   +    ++D  TG ++ +     
Sbjct: 3   MRRFRDKLKIAWLVALCIIGIINLTFFNVVKADEKPVNVKAAFMMDEKTGQILYQKNATR 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +  ASLTK++T  V+   + + K      I ISK+ ++                   ++
Sbjct: 63  KYAVASLTKILTLAVIMEDIHKHKLDWDQEIQISKDVAKVADDWRFSNVPLIYNERYTVR 122

Query: 110 LLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
            LI       A    E    +   +   F   M   +K  G+      N  G+       
Sbjct: 123 SLIESMMIVSADGSTEALALADAGSVAAFNYKMKVVAKRAGVKNPEIYNMIGLSNGELGN 182

Query: 159 -------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      +  +A+DMA++S  +   +P+ ++  + K    K  +          ++
Sbjct: 183 LKLPKIDDNQENQFSAKDMALISKYLIDKYPEVLNITKTKYANFKISQDNEIKMENIIYM 242

Query: 212 -----------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-RNKVSASL 259
                        DG+KTG T A+G+  V +    ++ +I V+L      + +   + ++
Sbjct: 243 LEGMGYGPKKGTMDGLKTGKTDAAGYCYVGTGTFDNRRVITVVLDVPGEYSNQFIQTNNM 302

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           +   F      K IN        Q ++       +++    +          +     S 
Sbjct: 303 IDTVFDKYQLVK-INKNNLPKKYQKITITSKKQKKKISVVPETDSALWLAKDQKLANLSP 361

Query: 320 FIDFEKITLLKN 331
            ++ +K   LK 
Sbjct: 362 KLEVKKQNKLKK 373


>gi|300902216|ref|ZP_07120216.1| Penicillin-binding protein 7 [Escherichia coli MS 84-1]
 gi|301305178|ref|ZP_07211277.1| Penicillin-binding protein 7 [Escherichia coli MS 124-1]
 gi|300405735|gb|EFJ89273.1| Penicillin-binding protein 7 [Escherichia coli MS 84-1]
 gi|300839582|gb|EFK67342.1| Penicillin-binding protein 7 [Escherichia coli MS 124-1]
 gi|315255353|gb|EFU35321.1| Penicillin-binding protein 7 [Escherichia coli MS 85-1]
          Length = 313

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 22/280 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA------------ETNKLPYYTLLDTNTGHVIAENYPD 48
           M +F V +    L    PF   A                     ++D NT   I  N+PD
Sbjct: 4   MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKAIYSNHPD 63

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++KLMTA VV          L   I+ +          S  +  S ++  + L
Sbjct: 64  LVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPE---MKGVYSRVRLNSEISRKDML 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A ++A       K F++ MN  +K+LG++ T F+   G+    + +TAR
Sbjct: 121 LLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGL-SVHNVSTAR 179

Query: 169 DMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTC 222
           D+  L      + +                      + NTN  V          KTGFT 
Sbjct: 180 DLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTN 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 240 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 279


>gi|326777112|ref|ZP_08236377.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657445|gb|EGE42291.1| Serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 477

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 19/279 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D   G V+A +       PAS  K++ A  V   L+     LT 
Sbjct: 65  APVLPKELTGRSWIVADAENGDVLAAHNAHWRLPPASTLKMLFADTVLPALQ--PTSLTH 122

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T  + +     S+    K       + L L +   + + AV +   +     + V  M
Sbjct: 123 KVTEGELSGVGEGSSLVGIKEDHTYTVHDLWLGVFLRSGNDAVHVLSEMYGGVPQTVSAM 182

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQ 189
              ++ L    T  ++  G    G  ++A D+ +++                       +
Sbjct: 183 QKHAEELQALDTRVVSPDGYDAPGQVSSAYDLTLIARSGLQKKDFREYAATASADFPGEE 242

Query: 190 IKGLEIKGKKYPNTNWAV------GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            KG + +  +  NTN  +        + G  G+K G+T  +G      A +  + L+  +
Sbjct: 243 KKGKKRESFEIQNTNRLITGDIGVDPYQGIAGVKNGYTTHAGNTFTGVAERNGKVLLVTV 302

Query: 244 LG--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           +   A + +   K +A LL  GF        +  ++   
Sbjct: 303 MNPSAEESHAVYKEAAHLLDWGFAASGKVAPVGELVPPK 341


>gi|126640330|ref|YP_001083314.1| D-alanyl-D-alanine endopeptidase penicillin-binding protein 7 and
           penicillin-binding protein 8 [Acinetobacter baumannii
           ATCC 17978]
          Length = 255

 Score =  122 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 8/247 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +   +       ++D  TG V+     +     AS+TKLMTA V           + T  
Sbjct: 4   NAQPSVSARAALVMDAQTGEVLYSKNTNASVPIASITKLMTAVVTADARLNMSEEI-TLE 62

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            I    +    S+ST + G  M     L   ++KS N  A A+A +       FV  MN 
Sbjct: 63  QIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALMKSENPAAAALARTYPGGRAAFVAAMNA 122

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK-- 198
            ++ LG++ATH+  + G+    + ++ARD+ IL+    + +     +      +      
Sbjct: 123 KARALGMNATHYYESTGL-DPRNVSSARDLGILAS-TASQYGLIRQFSTTPTYDFNLGYR 180

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             K  NTN  V       +  KTG+   +G  +V       +  + V+LG      RN  
Sbjct: 181 VLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVMHTTVNSRPAVIVLLGEPSTQARNND 240

Query: 256 SASLLSM 262
           + +LL  
Sbjct: 241 ATNLLGW 247


>gi|124267287|ref|YP_001021291.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylibium
           petroleiphilum PM1]
 gi|124260062|gb|ABM95056.1| Serine-type D-Ala-D-Ala carboxypeptidase [Methylibium
           petroleiphilum PM1]
          Length = 344

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 10/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
               +     ++D +T  V+ +         ASLTKLMT+ VV    +     L   +TI
Sbjct: 82  PLDLRSSVALVMDQDTHEVLIDKNAQAVLPIASLTKLMTSVVVVEAGQ----SLDEMLTI 137

Query: 83  SKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           S++  +    S S    G+ +T    L L ++ S N  A A+          FV  MN  
Sbjct: 138 SQDDVDTEKGSGSRLAVGTQLTRGEMLHLALMSSENRAAHALGRHYPGGLVAFVSAMNAR 197

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---KGK 198
           +  LG++ T ++   G+      ++ARD+A L                 +       +  
Sbjct: 198 ASLLGMTDTRYVEPTGLSSRNQ-SSARDLAALVSAAYQHPLIRELSTSQEYSVAVGRRTL 256

Query: 199 KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +Y NTN  V       G  KTG+   +G  +V  A    + LI V L +  + +R   + 
Sbjct: 257 QYRNTNGLVRNPAWDIGLQKTGYISEAGRCLVMQAQLAGRKLIMVFLDSAGKYSRQGDAE 316

Query: 258 SLLSM 262
            +   
Sbjct: 317 RVRHW 321


>gi|323526624|ref|YP_004228777.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1001]
 gi|323383626|gb|ADX55717.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1001]
          Length = 391

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS+TKLMTA VV    +         
Sbjct: 129 TPDALMLRSSVAYVVDQNTGEPLFDKNSRAVVPIASITKLMTAMVVLDSKEPMS---DQL 185

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 186 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFLAAMN 245

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIK 196
             ++ LG++ THF N  G+    + ++ARD+  +                +        +
Sbjct: 246 AKARQLGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPLIRKFSTDHSYEVYTGKR 304

Query: 197 GKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A    + ++ V+L +  + +R   
Sbjct: 305 TLAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQANIHGRPMVMVLLDSSGKYSRFAD 364

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 365 ATRLRTW 371


>gi|313651237|gb|EFS15635.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri 2a str. 2457T]
 gi|332755752|gb|EGJ86113.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri K-671]
 gi|332756170|gb|EGJ86521.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri 2747-71]
          Length = 300

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 26  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 85

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 86  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 142

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 143 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 201

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 202 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 261

Query: 258 SLLSM 262
            L + 
Sbjct: 262 RLRTW 266


>gi|227543628|ref|ZP_03973677.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           CF48-3A]
 gi|300908686|ref|ZP_07126149.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Lactobacillus reuteri SD2112]
 gi|68160975|gb|AAY86919.1| lr1832 [Lactobacillus reuteri]
 gi|227186372|gb|EEI66443.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           CF48-3A]
 gi|300894093|gb|EFK87451.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Lactobacillus reuteri SD2112]
          Length = 403

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 139/367 (37%), Gaps = 35/367 (9%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++  + I+++ M+  +     +A          + D +TG +I +   D     AS+TK
Sbjct: 1   MKKLTVFILSLFMMLMVGSQSVLANNRIDASAAIMADASTGQIIYKQNVDKALPVASITK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           L+T  V+   +++K+    T + I+       ++   S+   K G + ++   +   +VK
Sbjct: 61  LLTILVIEDEIQQKQLSWDTQVKITPEIAAISNDAAYSSIGLKSGQSYSVRTLINAALVK 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------------ 162
           SA+   VA+A +      +F   M   +K +G++ T+ +N+ G+                
Sbjct: 121 SADGATVALATATGDGTDEFNLKMMQKAKKIGMTKTNIVNSVGLDNGDMKSFKLADLPNN 180

Query: 163 --HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLG--- 212
             +  +ARD+AILS      +P+ +     K ++ +  K       N N  +        
Sbjct: 181 AANTMSARDVAILSQYFVKHYPELLQITAQKEVKFQIAKDQVKTEKNLNKMLPGEQYAVK 240

Query: 213 ---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLS--MGFY 265
               DG+KTG + ++G    ++       +I VIL +    ++ R K +  L        
Sbjct: 241 GVTIDGLKTGTSDSAGACFASTGKYQGHRIITVILHSKGSNKDNRFKATQDLYKILKTED 300

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
           +    K  + +        +   +    + V          N  +     K+       K
Sbjct: 301 HLQKIKVPSSVTTRKVANGVEKTMKLTPQHVTIWSPYDTKTNYTIGTQYKKKKLEAPIWK 360

Query: 326 ITLLKNK 332
              + N 
Sbjct: 361 GERVGNL 367


>gi|154504456|ref|ZP_02041194.1| hypothetical protein RUMGNA_01960 [Ruminococcus gnavus ATCC 29149]
 gi|153795231|gb|EDN77651.1| hypothetical protein RUMGNA_01960 [Ruminococcus gnavus ATCC 29149]
          Length = 468

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/298 (18%), Positives = 106/298 (35%), Gaps = 23/298 (7%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +N                 ++D N+G V+     +    PAS+TK+++      + K   
Sbjct: 61  TNEISNWPQGPAIYAASGIVMDMNSGAVLYAKKAEEKRYPASITKVLSVLTALQYAKMSD 120

Query: 74  AMLTTPITIS---KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
            ++ +  +IS    + ++            +      L      S         + L   
Sbjct: 121 TVVFSEDSISFLQWDDAQIGMKPGEEISMESALYGMLLASANEVSYAVAENVGKQYLNGG 180

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF-- 188
             +F++ MN  S+ LG ++++++NA+G+    HYTTA DMA ++     +          
Sbjct: 181 YAEFIEEMNRISQELGCTSSNWVNANGLHDDNHYTTAHDMARIAAAAYQNEEFRRLETPL 240

Query: 189 -----------QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                      + + L+   K     N+    +  A   KTG+T  S   +V  A   D 
Sbjct: 241 EYKVPPTNLTAEERILDQNHKMLWPENY--YYYANAKAGKTGYTDQSKTTLVTMAEGNDM 298

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK----INYIIKDFYQQNLSNEVPN 291
            L AV+L     +     +  +    F N           +  I+ F +++    VP 
Sbjct: 299 QLAAVVLHTYGVDA-YTDTRFMYDYAFTNFERLNLRECETSSDIESFDKEDAYVVVPK 355


>gi|15605280|ref|NP_220066.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|3328991|gb|AAC68153.1| D-Ala-D-Ala Carboxypeptidase [Chlamydia trachomatis D/UW-3/CX]
          Length = 343

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/299 (21%), Positives = 115/299 (38%), Gaps = 34/299 (11%)

Query: 1   MRQFLV----IIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPA 54
           MR F +     I +A     FP  +   T         ++  ++G ++ E   DH   PA
Sbjct: 1   MRTFFLLYRFFICLAPFFLSFPLYADPHTVLTKGIAAAVVHADSGAILKEKNLDHKIFPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTP-----------------ITISKNASEYPPSNSTFK 97
           S+TK+ TA ++     +      T                       +  E        K
Sbjct: 61  SMTKIATALLILRQYPDVLTRFITTRREPLTSITPQAKQQSGYRSPPHWLETDGMTIQLK 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
               ++  +    L++ SAND A  +A++ C++   F++ +N   + LG   THF + HG
Sbjct: 121 VKEEVSGWDLFHALLISSANDAANVLADACCQSVSAFMRQLNEFLRELGCQNTHFNSPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDF-----PQYMHYFQIKGLEIKGKKYPNTNW-----AV 207
           +    HYTTARD++++      +           Y          +   +TN      + 
Sbjct: 181 LHHPDHYTTARDLSLIMKEALKEPLFRQVIHTASYTMEATNLSPERVLSSTNKLLSSSST 240

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFY 265
             +    G KTG T ++G NI+ +A + ++S+I V  G         + + +L    F 
Sbjct: 241 YFYPPCLGGKTGTTKSAGKNIIFAAEKNNRSIIVVAAGYFGPAAQLYQDAIALCEDLFN 299


>gi|294788601|ref|ZP_06753843.1| D-alanyl-D-alanine carboxypeptidase family protein [Simonsiella
           muelleri ATCC 29453]
 gi|294483478|gb|EFG31163.1| D-alanyl-D-alanine carboxypeptidase family protein [Simonsiella
           muelleri ATCC 29453]
          Length = 292

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 9/250 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +           +++ NTG ++ +   D   + AS++KLM+A V+         
Sbjct: 38  FAASSFAYTPLLNARSALVMNANTGKILYQKNVDTVRSIASISKLMSAMVLLDAKLNMY- 96

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                            + S    G+T+T    L L ++ S N    A+A +       F
Sbjct: 97  --EDITITEDEIDRLKGTGSRLSIGTTLTRGELLHLGLMSSENRAIHALARTYPGGMGAF 154

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW----RIKTDFPQYMHYFQI 190
           V  MN  +++LG++ + F    G+    + +TARD++++        +       +Y Q+
Sbjct: 155 VAAMNAKAQSLGMNKSRFFEPTGL-DPRNVSTARDLSVMVRAASKYPQIRSLTTSNYGQV 213

Query: 191 KGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                K + Y NTN  V          KTG+   +G ++V  A  G+Q ++ V+LG+   
Sbjct: 214 YTSAGKTQTYKNTNALVREGDWDISLQKTGYIKEAGRSMVLQARLGNQPVVIVVLGSSTS 273

Query: 250 NTRNKVSASL 259
           ++R + +  L
Sbjct: 274 SSRVRDAREL 283


>gi|317508066|ref|ZP_07965751.1| D-alanyl-D-alanine carboxypeptidase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253634|gb|EFV13019.1| D-alanyl-D-alanine carboxypeptidase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 399

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 87/264 (32%), Gaps = 7/264 (2%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  A                   + + D ++G V+A + P   + PAS  K + A  V  
Sbjct: 70  LLAACGVVQPAGSPALPEGPARGWLVADLDSGQVLAASDPHGRFRPASTIKTLLALAVLD 129

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            L     +  T    + +     P      K +   L     ++    A +    +  + 
Sbjct: 130 ELDPNHVVQLTDGDQTADEESQHPFIEPGGKYTVFELLEGALMVSSNGAANALARVLGAG 189

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYM 185
               +  V+ MN+ +  LG   T      GV        ++  D+A++            
Sbjct: 190 GGV-EAAVKKMNDLAGLLGAKDTRATTPSGVEAPGGPSTSSPYDLALIFRAAMKQDIFRK 248

Query: 186 ---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                      +       N N  +  + G  G KTGFT  S    VA+A +  + L+  
Sbjct: 249 IVSQKSITMHGDPDDFPLVNDNAMLDDYPGMLGGKTGFTEDSQKTFVAAAERDGRRLVVT 308

Query: 243 IL-GALDRNTRNKVSASLLSMGFY 265
            + G     T  + +++LL  GF 
Sbjct: 309 QMYGLNGATTFREQASALLDWGFA 332


>gi|145294853|ref|YP_001137674.1| hypothetical protein cgR_0800 [Corynebacterium glutamicum R]
 gi|140844773|dbj|BAF53772.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 436

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 13/243 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           ET     + + D ++G +IA   P   + PAS+ K++ + V            TT +T +
Sbjct: 123 ETITASAWMVFDIDSGEIIAAKDPHGRYRPASIIKVLLSLVAIDE-----LNPTTVVTGT 177

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             A+    S     +G   T+D  L  L++ S ND A  +A+ L   ++  ++ +N  +K
Sbjct: 178 MEAANIEGSRVGVGEGGQYTVDQLLHGLLLASGNDAAYLLAQEL-GGDQATLEKVNALAK 236

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
            LG   T      G+   G  T+A DM+ L ++     P +        ++  G      
Sbjct: 237 ELGTQDTFVATYSGLDAPGMSTSAYDMS-LIYQHAWQNPVFESIISTDHIDFPGWGDNEG 295

Query: 199 -KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            +  N N          G KTG+T  +    V    +G + L AV+L +   + R    A
Sbjct: 296 FQVWNDNALFMNDPDGIGGKTGYTDDANHTFVGGLDRGGRRLAAVLLDSTVSDIRPWEQA 355

Query: 258 SLL 260
            LL
Sbjct: 356 RLL 358


>gi|21323446|dbj|BAB98073.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium glutamicum
           ATCC 13032]
          Length = 379

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 13/243 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           ET     + + D ++G +IA   P   + PAS+ K++ + V            TT +T +
Sbjct: 66  ETITASAWMVFDIDSGEIIAAKDPHGRYRPASIIKVLLSLVAIDE-----LNPTTVVTGT 120

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             A+    S     +G   T+D  L  L++ S ND A  +A+ L   ++  ++ +N  +K
Sbjct: 121 MEAANIEGSRVGVGEGGQYTVDQLLHGLLLASGNDAAYLLAQEL-GGDQATLEKVNALAK 179

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
            LG   T      G+   G  T+A DM+ L ++     P +        ++  G      
Sbjct: 180 ELGTQDTFVATYSGLDAPGMSTSAYDMS-LIYQHAWQNPVFESIISTDHIDFPGWGDNEG 238

Query: 199 -KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            +  N N          G KTG+T  +    V    +G + L AV+L +   + R    A
Sbjct: 239 FQVWNDNALFMNDPDGIGGKTGYTDDANHTFVGGLDRGGRRLAAVLLDSTVSDIRPWEQA 298

Query: 258 SLL 260
            LL
Sbjct: 299 RLL 301


>gi|19551910|ref|NP_599912.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium glutamicum
           ATCC 13032]
 gi|62389569|ref|YP_224971.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium glutamicum
           ATCC 13032]
 gi|41324903|emb|CAF19385.1| D-ALANYL-D-ALANINE CARBOXYPEPTIDASE [Corynebacterium glutamicum
           ATCC 13032]
          Length = 436

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 13/243 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           ET     + + D ++G +IA   P   + PAS+ K++ + V            TT +T +
Sbjct: 123 ETITASAWMVFDIDSGEIIAAKDPHGRYRPASIIKVLLSLVAIDE-----LNPTTVVTGT 177

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             A+    S     +G   T+D  L  L++ S ND A  +A+ L   ++  ++ +N  +K
Sbjct: 178 MEAANIEGSRVGVGEGGQYTVDQLLHGLLLASGNDAAYLLAQEL-GGDQATLEKVNALAK 236

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----- 198
            LG   T      G+   G  T+A DM+ L ++     P +        ++  G      
Sbjct: 237 ELGTQDTFVATYSGLDAPGMSTSAYDMS-LIYQHAWQNPVFESIISTDHIDFPGWGDNEG 295

Query: 199 -KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            +  N N          G KTG+T  +    V    +G + L AV+L +   + R    A
Sbjct: 296 FQVWNDNALFMNDPDGIGGKTGYTDDANHTFVGGLDRGGRRLAAVLLDSTVSDIRPWEQA 355

Query: 258 SLL 260
            LL
Sbjct: 356 RLL 358


>gi|307729203|ref|YP_003906427.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1003]
 gi|307583738|gb|ADN57136.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1003]
          Length = 393

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NTG  + +         AS+TKLMTA VV    +         
Sbjct: 131 TPDALMLRSSVAYVVDQNTGEPLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQL 187

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 188 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFLAAMN 247

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIK 196
             ++ LG++ THF N  G+    + ++ARD+  +                +        +
Sbjct: 248 AKARQLGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPLIRRFSTDHSYEVYTGKR 306

Query: 197 GKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A    + ++ V+L +  + +R   
Sbjct: 307 TLAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQANIHGRPMVLVLLDSSGKYSRFAD 366

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 367 ATRLRTW 373


>gi|149928524|ref|ZP_01916755.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Limnobacter
           sp. MED105]
 gi|149822763|gb|EDM82019.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Limnobacter
           sp. MED105]
          Length = 278

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 89/245 (36%), Gaps = 10/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             +       + D ++  V+    P      AS+TK+MT  V           L   ITI
Sbjct: 25  PLSLNSSVALVADADSLEVLYAKNPSAVVPIASITKIMTVVVTLEAG----LNLDEVITI 80

Query: 83  -SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            +++   Y  + S  K GS  T    + L ++ S N  A A+  S        V  MN  
Sbjct: 81  TTEDIDYYKNTRSRLKPGSEFTRRELIHLALMASENRAASALGRSYPGGLAACVAEMNRR 140

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTT---ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           + +L +  T+F    G+      +    AR +                 F ++  +    
Sbjct: 141 AASLRMFNTNFAETTGLSVENKSSANDLARMVLHAQRFPLIRQFSTDPQFSVQSGK-GQL 199

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  +          KTGF   +G  +V  A  GD++L+ V+L AL    R   + 
Sbjct: 200 NFRNTNRLIKNKEWDIQVQKTGFINEAGRCLVMKAKVGDRNLVIVLLDALGSQARFADAE 259

Query: 258 SLLSM 262
            +   
Sbjct: 260 RIREY 264


>gi|209522105|ref|ZP_03270754.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. H160]
 gi|209497459|gb|EDZ97665.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. H160]
          Length = 396

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 95/246 (38%), Gaps = 6/246 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+G  + +         AS+TKLMTA VV    +         
Sbjct: 134 TPDALMLRSSVAYVIDQNSGESLFDKNSRAVVPIASITKLMTAMVVLDSKEPMT---DQI 190

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 191 EVTDEDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFLAAMN 250

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K LG++ THF N  G+      +    + +++   +    +         +    + 
Sbjct: 251 AKAKQLGMNDTHFENPTGLTSMNVSSARDLVKMVNAAYQYPLIRKFSTDHSYDVYTGKRT 310

Query: 200 --YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             Y +TN  V       G  KTGF   +G  +V  A    + +I V+L +  + +R   +
Sbjct: 311 LAYNSTNALVRNPTWDIGLQKTGFINEAGECLVMQATIHGRPMILVLLDSSGKYSRFADA 370

Query: 257 ASLLSM 262
             L + 
Sbjct: 371 TRLRTW 376


>gi|145517883|ref|XP_001444819.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412252|emb|CAK77422.1| unnamed protein product [Paramecium tetraurelia]
          Length = 397

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 14/258 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            +I P  S+A       + +++   G ++           AS+TK+MT ++     ++ +
Sbjct: 142 ISITPLESVAPLVSAQSWCVINGKNGQLMGGYNQYKSRQMASITKIMTCWLALKLTQQFQ 201

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK- 132
             L      ++       + +    G  +++ + L  L++ S ND A+++  +    +  
Sbjct: 202 LDLDNTYFTAER---IGGTTAQLSSGDKLSIRDLLYGLMLPSGNDAAISLQHNFELYKGC 258

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--------FPQY 184
            F+Q MN  ++++G+  T + N HG+    +Y++A D+ IL++    +           Y
Sbjct: 259 DFIQQMNQNAQDIGMELTSYANPHGLYHEANYSSAYDIGILTYHAMQNLQFASIVKTKIY 318

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
               + K  E K   + NTN     + G  G+KTG T  +G  +V      + S I V+L
Sbjct: 319 FSEIEDKFGESKEIFWENTNRM--LYQGFRGVKTGITKEAGPCVVEYFEDNENSYIIVLL 376

Query: 245 GALDRNTRNKVSASLLSM 262
                + R + +  LL  
Sbjct: 377 NCRSVDLRWQDAIKLLDW 394


>gi|108807033|ref|YP_650949.1| Serine-type D-Ala-D-Ala carboxypeptidase [Yersinia pestis Antiqua]
 gi|108778946|gb|ABG13004.1| Serine-type D-Ala-D-Ala carboxypeptidase [Yersinia pestis Antiqua]
          Length = 232

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 6/191 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             A       Y L+D N+G V+AE  PD   +PASLTK+M++YV+   +K  K      +
Sbjct: 33  PAAPQIDAKAYVLMDFNSGKVLAEGNPDLRLDPASLTKIMSSYVIGQSIKAGKIQPDDLV 92

Query: 81  TISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           T+ K+A                K G  + + +  K ++++S ND ++A+A+ +  ++  F
Sbjct: 93  TVGKDAWATGNPALRGSSLMFLKPGDRVKVSDLNKGIVIQSGNDASIALADYVAGSQDSF 152

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           V  MNN +K LGLS THFM  HG+   G Y+TARDMA+L   +  D P+     + K   
Sbjct: 153 VGLMNNYAKALGLSNTHFMTVHGLDSPGQYSTARDMALLGQALIRDVPEEYALHKEKEFT 212

Query: 195 IKGKKYPNTNW 205
               +  N N 
Sbjct: 213 FNKIRQTNRNR 223


>gi|152987366|ref|YP_001349992.1| D-alanyl-D-alanine endopeptidase [Pseudomonas aeruginosa PA7]
 gi|150962524|gb|ABR84549.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas aeruginosa PA7]
          Length = 310

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 95/260 (36%), Gaps = 10/260 (3%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A++        L + +        + D N+G V+    PD     AS+TKLMTA VV   
Sbjct: 20  AISASPPPKAKLPLQQELASGSALVTDQNSGKVLYSRNPDLVVPIASITKLMTAMVVLDS 79

Query: 69  LKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                  L   + I     SE     S  + GS ++  + L L ++ S N  A ++A++ 
Sbjct: 80  K----LPLDEVLPIAISETSEMRGVFSRVRVGSQISRRDMLLLALMSSENRAAASLAQNY 135

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
              +  FV+ MN  +  LG+  T ++   G+  H   T      +L    +         
Sbjct: 136 PGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARDLTRLLVASRQYPLLSQWST 195

Query: 188 FQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              K +  +   Y     NTN  +          KTGFT  +G  +          +  V
Sbjct: 196 TPEKTVAFRHPNYTLGFRNTNHLINNKTWNIQLTKTGFTNEAGHCLAMRTTINRSPVNLV 255

Query: 243 ILGALDRNTRNKVSASLLSM 262
           +L A  + T    +  L   
Sbjct: 256 VLDAFGKYTHFADATRLRRW 275


>gi|319793229|ref|YP_004154869.1| peptidase s11 D-alanyL-D-alanine carboxypeptidase 1 [Variovorax
           paradoxus EPS]
 gi|315595692|gb|ADU36758.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Variovorax
           paradoxus EPS]
          Length = 394

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   K     ++D +T  V+           ASLTKLMT  ++       +      ITI
Sbjct: 132 ALDLKSSVALVIDQDTHEVLFSKNDHAVLPIASLTKLMTGLLISEA----RLPNDELITI 187

Query: 83  SKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++  +    S S    G+ ++    L L ++ S N  A A+  +       FV  MN  
Sbjct: 188 TQDDVDTEKGSRSRLTVGTMLSRGELLHLALMSSENRAAHALGRTYPGGLSTFVSIMNAK 247

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK--K 199
           +K LG+  T ++   G+      +      +++        + +       +E+  +  +
Sbjct: 248 AKMLGMKDTRYVEPTGLSSRNQSSAQDLALLVNAAYADATVRSLSTSPEYQVEVGNRVLQ 307

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  TN  V +     G  KTGF   +G  +V  A    + LI V L +  + +R   +  
Sbjct: 308 FNTTNRLVKSPDWEIGVQKTGFINEAGQCLVMQAKVAGRKLIMVFLDSAGKFSRIADAER 367

Query: 259 LLSM 262
           +   
Sbjct: 368 VRRW 371


>gi|182436490|ref|YP_001824209.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465006|dbj|BAG19526.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 571

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 19/279 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D   G V+A +       PAS  K++ A  V   L+     LT 
Sbjct: 165 APVLPKELTGRSWIVADAENGDVLAAHNAHWRLPPASTLKMLFADTVLPALQ--PTTLTH 222

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T  + +     S+    K       + L L +   + + AV +   +     + V  M
Sbjct: 223 KVTEGELSGVGEGSSLVGIKEDHTYTVHDLWLGVFLRSGNDAVHVLSEMYGGVPQTVSAM 282

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQ 189
              ++ L    T  ++  G    G  ++A D+ +++                       +
Sbjct: 283 QKHAEELQALDTRVVSPDGYDAPGQVSSAYDLTLIARSGLQKKDFREYAATASADFPGEE 342

Query: 190 IKGLEIKGKKYPNTNWAV------GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            KG + +  +  NTN  +        + G  G+K G+T  +G      A +  + L+  +
Sbjct: 343 KKGKKRESFEIQNTNRLITGDIGVDPYQGIAGVKNGYTTHAGNTFTGVAERNGKVLLVTV 402

Query: 244 LG--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           +   A + +   K +A LL  GF        +  ++   
Sbjct: 403 MNPSAEESHAVYKEAAHLLDWGFAASGKVAPVGELVPPK 441


>gi|158929991|gb|ABW82972.1| endopeptidase [uncultured bacterium pEAF66]
          Length = 368

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                     +LD N+  V+ E         AS+TKLMT  VV    ++   +LT     
Sbjct: 105 PLDLASSVALVLDQNSAEVLFEKNSKIALPIASITKLMTGLVVVEANQDMNEILTVTE-- 162

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
             +      ++S  + GS ++  + L + ++ S N  A A+  +       FV+ MN  +
Sbjct: 163 -DDVDHEKWTSSRLRVGSQLSRASLLHIALMSSENRAAAALGRNYPGGVAGFVEAMNAKA 221

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGKK 199
           + LG+  T F+++ G+    + ++A D+A L+                  +     +   
Sbjct: 222 RALGMYDTRFVDSSGL-SSKNISSAHDLAKLAAFAYHQPLLRQFSTDPKSVVAASGRTLN 280

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y NTN+ V +     G  KTGF   +G  +V  A+   +++I V L +  + +R   +  
Sbjct: 281 YHNTNYLVASPDWDIGLQKTGFINEAGRCLVMQAMISGRAVIMVFLDSKGKQSRTADAGR 340

Query: 259 LLSM 262
           +   
Sbjct: 341 VKRW 344


>gi|260583723|ref|ZP_05851471.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella elegans
           ATCC 700633]
 gi|260158349|gb|EEW93417.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella elegans
           ATCC 700633]
          Length = 473

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 75/343 (21%), Positives = 134/343 (39%), Gaps = 35/343 (10%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D +TG ++  +  D PW+PAS++K+MTAY+ F  +KE K  L T +T ++    
Sbjct: 70  ESTIMVDADTGEIVFGSNIDQPWDPASISKMMTAYMAFEAMKEGKLSLDTVVTATEEDRA 129

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  SN+    G    ++  L ++   S+N   + +A +   ++ +F+  MN   K 
Sbjct: 130 ISTIGEISNNIIVAGVDYPIEELLYMMFYPSSNVATLMVARATGLSDTEFLNKMNAKFKE 189

Query: 145 LGLSATHFMNAHGV---------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
            G+  T F NA G                    + TTARD+AIL++    DFP+  ++ +
Sbjct: 190 WGMENTKFNNASGAVASAFRGYYTPEGYNNNRYNQTTARDLAILAYHFLKDFPEITNFTK 249

Query: 190 IKGLE------IKGKKYPNTNWAVGTF---LGADGMKTGFTCASGFNIVASAIQGDQSLI 240
              +        +   Y   +   G +    G DG KTG + ++ FN + +A Q D   I
Sbjct: 250 NPLITVMVGTPYEESFYTYNSSIPGMYQGFPGVDGFKTGSSPSAAFNHLLTAKQEDTRFI 309

Query: 241 AVILGALDRNTRNKVS-------ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
            VILG      ++  S         LL   F     +  +           +  +    +
Sbjct: 310 QVILGVGAWEDKDNSSFFKSQIGNGLLRKAFSEYETQTVLKAGEHTIDGVKVQLDKDIKT 369

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   +      ++    D        E +T     I ++
Sbjct: 370 LVRIGETPKYHLKEDKIVIETDLPRITSKIEPLTYPVTIIPEE 412


>gi|157151599|ref|YP_001450863.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157076393|gb|ABV11076.1| D-Alanyl-D-Alanine carboxypeptidase [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 460

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 131/361 (36%), Gaps = 55/361 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---------------KLPYYTLLDTNTGHVIAEN 45
           M++  + +   +          A+                 +     ++D NTG V+ ++
Sbjct: 1   MKKKWIALVCLVTLLFGAATVSADELMDITRKAYPDVKDINRPRSSLIIDGNTGDVLWQD 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG-----S 100
             D   +PAS++KLMT Y++F  + + K    T I  S+                     
Sbjct: 61  NIDEVRDPASMSKLMTLYLLFEAMGQGKLSEDTIIKASQTDQNIAGIYEISNNKIVAGVD 120

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG--- 157
               +     ++  S     +            F+  MN+ +K LG++ TH+ NA G   
Sbjct: 121 YTISELITMTVVPSSNATTVMIANYLSNNDPDAFLDQMNSKAKELGMTNTHWYNASGAAA 180

Query: 158 ------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
                            + TTARD+AIL++     +P  + Y     + +K        +
Sbjct: 181 SSFKGFYTPQRYDNNAANQTTARDLAILAYNFVKKYPGILKYTNKPVVTVKKGTPYEETF 240

Query: 206 AVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT----- 251
               +          G DG+KTG +    FN +A+  +G+Q +I+VI+G  D +      
Sbjct: 241 ETYNYSVPGAKYGLEGVDGLKTGSSPRGAFNYIATVKRGEQRIISVIMGVGDWSDQDGEY 300

Query: 252 -RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            R+    +L+   + +   +K +           +  +   + ++   T K+  N    +
Sbjct: 301 YRHPFGNALIEKAYADYEYKKLLTAGEH-----KIDGKTYKLEKDFYGTVKKGTNPKLVV 355

Query: 311 K 311
           K
Sbjct: 356 K 356


>gi|120403176|ref|YP_953005.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119955994|gb|ABM12999.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 294

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 105/290 (36%), Gaps = 31/290 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIA---------------ETNKLPYYTLLDTNTGHVIA 43
           M + L  +   + ++ ++    + A                      + + D +TG V+A
Sbjct: 1   MTRLLACLGAVLCLVGSVSVPHAAAVPATGIVQPAGSMPIPDGPAQAWIVADMDTGAVLA 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
                  + PAS  K++ A VV          L   I  ++  +    + +    G T T
Sbjct: 61  ARDEHGHFAPASTIKVLLAMVVLDE-----LPLDATIVANEADTLVECNCAGVTPGRTYT 115

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQH 161
               L+ L++ S ND A  +A  L   +   ++ MN  +  LG   T+  +  G+     
Sbjct: 116 TRQLLEALLLVSGNDAANTLATMLGGRDVAVMK-MNAKAATLGAYGTNAGSPSGIDGPGI 174

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIK---GLEIKGKKYPNTNWAVGTFLGADGMKT 218
             ++T RD+A++      D        Q       +       N +  +  + G  G KT
Sbjct: 175 DIWSTPRDLAVIFRAAMADPVFAQIVAQPTAVFPAKTGDVVLVNQDELLHRYPGTFGGKT 234

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFY 265
           G+T  +    V  A +  + L+  ++         T    +A+LL  GF 
Sbjct: 235 GYTDLARKTFVGGAARNGRHLVVALMYGLVKEGGPTYWDQAAALLDWGFA 284


>gi|302557055|ref|ZP_07309397.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302474673|gb|EFL37766.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 381

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 88/262 (33%), Gaps = 19/262 (7%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P            + + D  TG V A +       PAS  K + A  V   L        
Sbjct: 58  PGAPEVPEVSALSWLVADARTGDVPAAHDAHRRLPPASTLKTLFALTVLPALPAGI---- 113

Query: 78  TPITISKNA--SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
               +S+       P S+            + L   +  S+ + AV +  +L    +   
Sbjct: 114 -RHRVSERELADIGPGSSLVGVAEDRAYRVSDLWNGVFLSSGNDAVRVLATLSGGWRATA 172

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIK 191
           + M   ++ LG   T   +  G    G  ++A D+A+       +         H  +  
Sbjct: 173 ERMQAEARALGARDTRVKSPDGYDTPGQVSSAFDLAVFGRAGLRNAEFARYCARHEARFP 232

Query: 192 GLEIKGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
             +       NTN        V  + G  G+K G+T  +G  +VA+A +   +L+  ++ 
Sbjct: 233 ARDGGSFGIVNTNRLLTGADGVEAYDGLVGIKNGYTSNAGNTLVAAARRDGHTLVVTVMN 292

Query: 246 ALDRNTR--NKVSASLLSMGFY 265
                     + + SLL  GF 
Sbjct: 293 PQSGGGHAVYEEARSLLDWGFE 314


>gi|257437711|ref|ZP_05613466.1| putative D-alanyl-D-alanine carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257200018|gb|EEU98302.1| putative D-alanyl-D-alanine carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 429

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 130/343 (37%), Gaps = 22/343 (6%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            +       + I   N+     L + +    I E   D     ASLTK+MTA +     K
Sbjct: 24  ILPGLAAYEMPIQTVNEGESVYLFNADIDKPILEQNADQQRYIASLTKMMTALLFLESGK 83

Query: 71  EKKAMLTTPITISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
           +  A +T P ++++   +      S    + G T+   + L  L+V SAND A AIA  +
Sbjct: 84  DMNAEITIPASLTQEFKDIQNANGSTINLRIGETVRRIDLLYGLLVASANDAASAIASDV 143

Query: 128 CKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
              +   FV  MN  +K LG ++T F   HG+  +G+ ++A D+A+++     +      
Sbjct: 144 SDGDLTAFVARMNQRAKELGCTSTSFTCVHGLYDYGNVSSAHDLALIAKACAENETYMQV 203

Query: 187 YFQIKGLEIKGKKYPNT----------NWAVGTF-LGADGMKTGFTCASGFNIVASAIQG 235
              +         + N           N     +     GMKTGFT  +G   V  A + 
Sbjct: 204 ANTLSYTLPATNLHQNERTITSTNLMLNPEYPYYRDYIRGMKTGFTTLAGRCYVTFAQKD 263

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPN 291
             +   V+LG+ D +   + ++ +L   F + +DR+ ++           +     EV  
Sbjct: 264 GHTYGLVVLGS-DLDNIYREASEILDWAFASFSDRELVDTETPLTTAPLKKCRSYEEVEL 322

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
            +    +        +        +++     +   +L     
Sbjct: 323 YAAAPVSGYGHAD--DKVTFTYNLQKNISATVKDGAVLGTATV 363


>gi|222111139|ref|YP_002553403.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Acidovorax
           ebreus TPSY]
 gi|221730583|gb|ACM33403.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidovorax
           ebreus TPSY]
          Length = 360

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 98/248 (39%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +S     K     ++D +T  V+           ASLTKLMT  +V          +   
Sbjct: 100 VSDPLDLKSSVALVIDQDTKEVLLSKNDHAVLPIASLTKLMTGLLVSEA----HLPMDEL 155

Query: 80  ITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ITI+++  +    S S    G+T++    L L ++ S N  A A+  +       FV  M
Sbjct: 156 ITITQDDVDTEKGSGSRLAVGTTLSRGELLHLALMSSENRAAHALGRTFPGGLDTFVARM 215

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +K LG++ T F+   G+      ++A D+A L      D                  
Sbjct: 216 NAKAKLLGMADTRFVEPTGLSSRNQ-SSAHDLATLVNVAHGDALLRELSTSPSHEVAIGR 274

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +  +Y NTN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R  
Sbjct: 275 RTLQYNNTNRLVKSPSWDIGLQKTGYISEAGRCLVMQAEVAGRKLIMVFLDSAGKFSRLG 334

Query: 255 VSASLLSM 262
            +  + S 
Sbjct: 335 DAERVRSW 342


>gi|121594143|ref|YP_986039.1| murein-DD-endopeptidase [Acidovorax sp. JS42]
 gi|120606223|gb|ABM41963.1| murein-DD-endopeptidase [Acidovorax sp. JS42]
          Length = 360

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 98/248 (39%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +S     K     ++D +T  V+           ASLTKLMT  +V          +   
Sbjct: 100 VSDPLDLKSSVALVIDQDTKEVLLSKNDHAVLPIASLTKLMTGLLVSEA----HLPMDEL 155

Query: 80  ITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ITI+++  +    S S    G+T++    L L ++ S N  A A+  +       FV  M
Sbjct: 156 ITITQDDVDTEKGSGSRLAVGTTLSRGELLHLALMSSENRAAHALGRTFPGGLDTFVARM 215

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +K LG++ T F+   G+      ++A D+A L      D                  
Sbjct: 216 NAKAKLLGMADTRFVEPTGLSSRNQ-SSAHDLATLVNVAHGDALLRELSTSPSHEVAVGR 274

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +  +Y NTN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R  
Sbjct: 275 RTLQYNNTNRLVKSPSWDIGLQKTGYISEAGRCLVMQAEVAGRKLIMVFLDSAGKFSRLG 334

Query: 255 VSASLLSM 262
            +  + S 
Sbjct: 335 DAERVRSW 342


>gi|148653230|ref|YP_001280323.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Psychrobacter
           sp. PRwf-1]
 gi|148572314|gb|ABQ94373.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Psychrobacter
           sp. PRwf-1]
          Length = 344

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 95/252 (37%), Gaps = 19/252 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF--LKEKKAMLTT 78
           S+  +       +LD  TG  + +   D     AS+TK+MTA VV        ++  L  
Sbjct: 91  SLPISTGSRGVIVLDVETGKPLYQKNADVARPIASITKIMTAMVVLDAGLDMREEIKLDP 150

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
              +         ++S  K G  M     L + ++KS N  A ++A +       F++ M
Sbjct: 151 EDFVGPKR-----ASSRLKSGDRMNRAELLLMALMKSENPAAKSLARNYPGGYDAFMRAM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +++LG+++  F +  G+ +    +      ++       +     +   K  +    
Sbjct: 206 NAKARSLGMTSAFFGDPTGLDKRNVASPVDLAKMVQA--AGQYEVIRRFSTTKNYDFYVA 263

Query: 199 KYPNTNWAVGTFLG----------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
            Y   N                      KTGF   +G  +V      ++  I VILGA +
Sbjct: 264 NYSAGNRPYPANNTSKLVRSGTYPIGISKTGFINEAGQCVVMETRVNNKPAIIVILGADN 323

Query: 249 RNTRNKVSASLL 260
            NTR   + ++L
Sbjct: 324 SNTRWNDAETIL 335


>gi|169823800|ref|YP_001691411.1| D-alanyl-D-alanine carboxypeptidase [Finegoldia magna ATCC 29328]
 gi|167830605|dbj|BAG07521.1| D-alanyl-D-alanine carboxypeptidase [Finegoldia magna ATCC 29328]
          Length = 394

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 151/352 (42%), Gaps = 20/352 (5%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+  + ++ + + +     P LS A       +K+  Y  ++ +    +     + P   
Sbjct: 1   MKSIKKIIPLMLVLAIVFQPALSKADSKLGFEDKVKAYYTIEQDYSQELLNYNENKPLAI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTK+MT  +V   +   K  L   I I    ++   S    KKG  +T+++ ++ +++
Sbjct: 61  ASLTKIMTYVLVMEDINANKYKLDDKIKIQTQYAKPEASTMQLKKGEELTVNDLIRGMMI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMA 171
            S ND A  +A     +  KFV+ MN  +  L L +  F +A G       +  +A+D+A
Sbjct: 121 VSGNDAADELAVKSEGSVGKFVERMNKKAAELELESAKFYSASGYPENDKENLMSAKDLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIV 229
            L+     ++PQ ++Y + + L +  +KY    T   +G   G DG KTG T  +G+ ++
Sbjct: 181 KLTTYTINNYPQVLNYTKTQKLVMPSRKYEAATTIPFLGKIEGVDGFKTGTTEKAGYCLI 240

Query: 230 ASA----IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
            +           +++V++GA  +  RN     +L     +      +N   +   +   
Sbjct: 241 TTMSLKPNNPKNKVVSVLMGAPTKYDRNTYQKIMLEYVRNSFEPMNILNS--EKPIETKS 298

Query: 286 SNEVPNISEEVCTTQKEIINYNTQM---KEAKDKESHFIDFEKITLLKNKIT 334
            + V +   E+  T+   I YN +    ++   K+      +K  ++   I 
Sbjct: 299 VDSVVDKKVEIYPTEDVSILYNNKTGLQQKVDIKKDLKAPLKKGQVVGKVII 350


>gi|322833771|ref|YP_004213798.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Rahnella sp.
           Y9602]
 gi|321168972|gb|ADW74671.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Rahnella sp.
           Y9602]
          Length = 310

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 93/252 (36%), Gaps = 12/252 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           P ++           ++D  +  VI    PD     ASLTKLMTA V           L 
Sbjct: 30  PAVAPIVQIASGSAMVVDLKSHEVIYSRNPDEVRPIASLTKLMTAMVTLDA----NLPLD 85

Query: 78  TPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
             I I   N  E     S  K  S +T    ++L ++ S N  A ++A         F+ 
Sbjct: 86  EVINIDISNTPEMRGVFSRVKLNSEITRRQMIQLALMSSENRAAASLAAHYPGGYSAFIN 145

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIK 191
            MN  +K+LG++ TH+    G+    + +TARD+  L      + +            + 
Sbjct: 146 AMNAKAKSLGMTHTHYAEPTGL-SPRNVSTARDLTRLLLASQRYPLIGQLSTTAEKTAVF 204

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                   + NTN  +          KTG+T  +G  +        + +  V++ A  + 
Sbjct: 205 SHPAYALPFRNTNHLIMNPSWNIQLTKTGYTDEAGHCLAMRTTINGKPVTLVVMDAFGKF 264

Query: 251 TRNKVSASLLSM 262
           T    +  L + 
Sbjct: 265 TAFADANRLRTW 276


>gi|303235381|ref|ZP_07321998.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           BVS033A4]
 gi|302493502|gb|EFL53291.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           BVS033A4]
          Length = 394

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/352 (21%), Positives = 151/352 (42%), Gaps = 20/352 (5%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M+  + ++ + + +     P LS A       +K+  Y  ++ +    +     + P   
Sbjct: 1   MKSIKKIIPLMLVLAIVFQPALSKADSKLGFEDKVKAYYTIEQDYSQELLNYNENKPLAI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTK+MT  +V   +   K  L   I I    ++   S    KKG  +T+++ ++ +++
Sbjct: 61  ASLTKIMTYVLVMEDINANKYKLDDKIKIQTQYAKPEASTMQLKKGEELTVNDLIRGMMI 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMA 171
            S ND A  +A     +  KFV+ MN  +  L L +  F +A G       +  +A+D+A
Sbjct: 121 VSGNDAADELAVKSEGSVGKFVERMNKKAAELELESAKFYSASGYPENDKENLMSAKDLA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIV 229
            L+     ++PQ ++Y + + L +  +KY    T   +G   G DG KTG T  +G+ ++
Sbjct: 181 KLTTYTINNYPQVLNYTKTQKLVMPSRKYEAATTVPFLGKIEGVDGFKTGTTEKAGYCLI 240

Query: 230 ASA----IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNL 285
            +           +++V++GA  +  RN     +L     +      +N   +   +   
Sbjct: 241 TTMSLKPNNPKNKVVSVLMGAPTKYDRNTYQKIMLEYVRNSFEPMNILNS--EKPIETKS 298

Query: 286 SNEVPNISEEVCTTQKEIINYNTQM---KEAKDKESHFIDFEKITLLKNKIT 334
            + V +   E+  T+   I YN +    ++   K+      +K  ++   I 
Sbjct: 299 VDSVVDKKVEIYPTEDVSILYNNKTGLQQKVDIKKDLKAPLKKGQVVGKVII 350


>gi|49481069|ref|YP_039030.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332625|gb|AAT63271.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 279

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYAITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|239980721|ref|ZP_04703245.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces albus J1074]
          Length = 313

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/276 (23%), Positives = 110/276 (39%), Gaps = 19/276 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D ++G  +     D     AS TK M   VV            T     +
Sbjct: 41  KVSAKGAFLMDASSGKTVFSKSADTKRQMASTTKTMAVAVVLDTKGVNLDKKVTVKQTYR 100

Query: 85  NASEYPPSNS-TFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------CKTEKKFVQH 137
           +      +++   + G  +T+   L   ++ S  D A A+A++           K F+  
Sbjct: 101 DYVAKNGASTADLRTGDKLTVRQLLYGTMLPSGCDAAYALADTFGSGSTVSARTKSFISK 160

Query: 138 MNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYM--------HYF 188
           MN  +K+LG++ T F +  G+     +Y+T RD+A L+     +                
Sbjct: 161 MNAKAKSLGMTNTKFDSFDGISKAGNNYSTPRDLAKLARHAMKNSTFKTVVKAASTKQKA 220

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             KG   +   + NTN  +G++ GA G KTG   A+G  ++ SA +  +SL+ VIL    
Sbjct: 221 TAKGGGTRTYTWYNTNKLLGSYKGATGAKTGTGTAAGPCLIFSATKNGKSLVGVILN--- 277

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
            + R   +  +L  GF  KT        +    QQ+
Sbjct: 278 DSNRYADAGKMLDYGFGKKTTSTLKVKPLPQGAQQD 313


>gi|297201047|ref|ZP_06918444.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
 gi|197712169|gb|EDY56203.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
          Length = 277

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/278 (20%), Positives = 106/278 (38%), Gaps = 22/278 (7%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++     +        A +       +++   G  +     D   +  S TK+MTA VV 
Sbjct: 1   MLTAGAFTAAPAQAVTAPSIVAKGGYVMNNANGKTLYTKAADTKRSTGSTTKIMTAKVVL 60

Query: 67  SFLKEKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +        L   +TI    S        S +    G  +T+   L  L++ S  D A A
Sbjct: 61  AQS---NLNLDKKVTIQKAYSDYIVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYA 117

Query: 123 IAESLCK------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +A++           K F+  MN  + +LGL  THF +  G+    +Y+T RD+  ++  
Sbjct: 118 LADTYGTGSTRAARVKSFISKMNQAATSLGLRNTHFDSFDGIGNGNNYSTPRDLTKIASS 177

Query: 177 IKTDFPQYM---------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              +                    G       + NTN  + ++ G  G+KTG    + + 
Sbjct: 178 AMKNATFRTVVKTKKYTAKTITKTGSTRTMAPWTNTNGLLSSYSGTIGVKTGSGPEAKYC 237

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           +V +A +  +++I  +L +     R   +  LL+ GF 
Sbjct: 238 LVVAATRNGKTVIGTVLASTSITQREADAKKLLNYGFA 275


>gi|113867401|ref|YP_725890.1| D-alanyl-D-alanine carboxypeptidase [Ralstonia eutropha H16]
 gi|113526177|emb|CAJ92522.1| D-Alanyl-D-alanine carboxypeptidase [Ralstonia eutropha H16]
          Length = 380

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   +     ++D N+  V+ +         AS+TKLMTA VV       +  +   +TI
Sbjct: 102 ALALRSSVALVMDQNSNEVLFQKNASAVLPIASITKLMTALVVMDA----RLPMDEVLTI 157

Query: 83  SKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           S+   +    + +  +  + +T    L L ++ S N  A A+  +       FVQ MN  
Sbjct: 158 SEEDRDTEKHSGSRLRFGTQLTRQELLLLALMSSENRAASALGRNYPGGLPAFVQAMNRK 217

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKK 199
           ++ LG++ +HF+++ G+      +    + +++   +    +         + +  + + 
Sbjct: 218 ARELGMNDSHFVDSSGLSSSNVSSATDLVRMVNAAYRNPTIREFSTQTEHEVNVLGRTQH 277

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y +TN  V       G  KTGF   +G  +V  A    ++++ V L +  + +R   +  
Sbjct: 278 YVSTNRLVRGGNWEIGLQKTGFISEAGQCLVMQAKVQGRNVVMVFLDSAGKLSRFADANR 337

Query: 259 LLSM 262
           +   
Sbjct: 338 VKDW 341


>gi|300779711|ref|ZP_07089567.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           genitalium ATCC 33030]
 gi|300533821|gb|EFK54880.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           genitalium ATCC 33030]
          Length = 434

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 17/262 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E      + + D +TG VIA   P   + PAS+ K++ A V           L   +T+S
Sbjct: 118 EAVVSAAWLVADVDTGDVIAMKDPHGRYRPASIIKVLLALVAIDE-----LPLDKKVTVS 172

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + ++    S      G   T+++ L  L++ S ND + A+A+ L   ++  ++ +N  ++
Sbjct: 173 EESAGQEGSAVGIGAGGEYTINDLLHGLLMVSGNDASHALAQEL-GGDQATLEKINAKAR 231

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---------- 193
            L L  T+  +  G+   G  T+A DM +       +                       
Sbjct: 232 ELNLRDTYAASYSGLDAPGMSTSAWDMGLAYRVAYENGTFANIIKTEMYPFPGYIAADGT 291

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR- 252
             +     N N          G KTG+T  +    V +  +  + L+AV+L       R 
Sbjct: 292 VFEPFDVYNDNHLYLNDPDGIGGKTGYTDDAHHTFVGALDRDGRRLMAVVLDTTADEARA 351

Query: 253 NKVSASLLSMGFYNKTDRKKIN 274
            + +  LL   +   +     +
Sbjct: 352 WEQAQRLLHESYRFTSSEAVAS 373


>gi|304312179|ref|YP_003811777.1| Probable D-alanyl-D-alanine carboxypeptidase [gamma proteobacterium
           HdN1]
 gi|301797912|emb|CBL46134.1| Probable D-alanyl-D-alanine carboxypeptidase [gamma proteobacterium
           HdN1]
          Length = 394

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 92/244 (37%), Gaps = 8/244 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +     ++D +TG ++     +     AS+TKLMTA VV    +    +LT      
Sbjct: 134 PGLQSRAALVMDADTGEILYGKNSNETVPIASITKLMTAIVVLDAGQSMHEILTITN--- 190

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +      S+S  + G+ +     + L ++ S N  A A+  +     +  ++ MN  + 
Sbjct: 191 DDVDTLRHSSSRLRVGTRLPRGEMMHLALMSSENRAASALIRNYPGGLQAGLRAMNAKAA 250

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKK 199
            LG++++HF +  G+      +      ++                   + +       +
Sbjct: 251 ELGMTSSHFYDGTGLNGGNRASLFDLAKMVKAANTYPEIHDYSTSSSAMVSVAGYRNQLR 310

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y NTN  V       G  KTG+   +G  +V  A  G  + + V++ +    TR   +  
Sbjct: 311 YVNTNPLVNNSGWDIGVTKTGYIREAGKCLVMQARIGATNTVLVLMDSWGAQTRVGDANR 370

Query: 259 LLSM 262
           +   
Sbjct: 371 VKHW 374


>gi|126650121|ref|ZP_01722354.1| DacB [Bacillus sp. B14905]
 gi|126593293|gb|EAZ87255.1| DacB [Bacillus sp. B14905]
          Length = 348

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 141/361 (39%), Gaps = 52/361 (14%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ + +L  I P  S A       Y +LD +TG V+  +  +     ASLTK+ TA V  
Sbjct: 1   MLMIIVLMVILPQTSFARG--GSGYAVLDGDTGRVLIGSNSNERLPIASLTKIWTALVAI 58

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                    L   + IS  A+    S+   + G T+T++  L  L+++S ND A A+AE 
Sbjct: 59  ENSD-----LQEEVVISPKAAMAEGSSIYLQAGETVTVETLLYGLMLRSGNDAATALAEH 113

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQY 184
           +  + + FV+ MN  +   GL+ T FMN  G+    H ++ARD A +      +  F + 
Sbjct: 114 VGGSVEGFVKLMNERAVIAGLTNTVFMNPSGLHHEDHLSSARDTAEMLRVALQNKTFEKI 173

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG----------------------ADGMKTGFTC 222
                 +   + G  + N +  +    G                      A   KTGFT 
Sbjct: 174 ASTVLYRANTVNGMLWENKHRLLREGSGMAAEIDDETEQPVSSLKSATGVAYAGKTGFTK 233

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G  +  +  +  Q+ I V L   D    +            + +++   +Y ++   +
Sbjct: 234 VAGRTLATAFQKDGQTCIVVTLNVSDDWNVH-----------RSFSNQVWTDYDLETVVK 282

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQM----------KEAKDKESHFIDFEKITLLKNK 332
           +   N    ++  +    +  +N   +           K  +   S F+  E+I  +  K
Sbjct: 283 KGKYNVNKKLAIRLEEPVRLQLNKEEKAQVRQVLHVSRKRQEAVLSIFLGEERIYAIPVK 342

Query: 333 I 333
           +
Sbjct: 343 V 343


>gi|227515412|ref|ZP_03945461.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus fermentum
           ATCC 14931]
 gi|227086216|gb|EEI21528.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus fermentum
           ATCC 14931]
          Length = 417

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 73/372 (19%), Positives = 142/372 (38%), Gaps = 43/372 (11%)

Query: 1   MRQF----------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHP 50
           MR+           +V     + ++     + + T        +D  TG V+ E      
Sbjct: 1   MRKLRRVCFHLLLVVVTFTTVLATSAGAVANASSTVDARAAITIDAETGQVLYEKNATKR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDN 106
           +  AS+ K+ T  V+   +++ K      I ISK      +++  SN    +G + T+ +
Sbjct: 61  YPIASVIKIRTLAVIEQDIEQGKLKWDQKIKISKEVAKVANDWRFSNVQLNEGESYTVKS 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---- 162
            ++ +++ SA+  A A+A +   +   F Q M   +K  G++     N  G+        
Sbjct: 121 LVESMMIVSADGSAEALALASAGSTAAFNQKMQAVAKEAGVTDAKIYNMIGLANGDLGEM 180

Query: 163 ----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAV 207
                     +  +A+D+A ++  +   +P  +   + K +       +  +  N N  +
Sbjct: 181 RLKNVSKKAENQLSAKDVAKIARYLVEKYPSVLEITKQKFVNFQVSDSQQYEMVNINSML 240

Query: 208 GTFL------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLL 260
                       DG+KTG T +SG+  V +     + LI V+L      N + KV+ +++
Sbjct: 241 PQNAAASTHGEVDGLKTGMTDSSGYCFVGTGTFNGRRLITVVLKVPGEYNNQFKVTDAMI 300

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
                           + DF +   S  V +  ++   T    +   T +  AK+     
Sbjct: 301 GQVLDKYQYLTVNK--LSDFKKGVQSVTVAHAEKKGPKTVGLTLKKATTLWLAKNTSLKK 358

Query: 321 IDFEKITLLKNK 332
            D E I L KNK
Sbjct: 359 ADVELI-LDKNK 369


>gi|15835453|ref|NP_297212.1| D-alanyl-D-alanine carboxypeptidase, putative [Chlamydia muridarum
           Nigg]
 gi|7190867|gb|AAF39639.1| D-alanyl-D-alanine carboxypeptidase, putative [Chlamydia muridarum
           Nigg]
          Length = 438

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 129/364 (35%), Gaps = 48/364 (13%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNP 53
           MR         I +  +       L+ +           ++  ++G ++ E   D    P
Sbjct: 1   MRILSLLCRFFICSSPLFLQPASLLAASPAITTKGLAAAVMHADSGAILKEKNLDQKIFP 60

Query: 54  ASLTKLMTAYVVFSFL-----KEKKAMLTTPITISKNASEYPPSNSTFKK---------- 98
           AS+TK+ TA ++         +          +I+  A +     S              
Sbjct: 61  ASMTKIATALLILRKHPDVLTRFITIRREPLTSITPQAKQQSGYRSPPHWLETDGVAIQL 120

Query: 99  --GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
                ++  +    L++ SAND A  +A++ C++   F+  +N+  K +G   THF + H
Sbjct: 121 KSKEEVSGWDLFHALLISSANDAANVLADACCQSVPAFMHQLNDFLKEIGCQNTHFNSPH 180

Query: 157 GVVQHGHYTTARDMAILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYPNTNW-----A 206
           G+    HYTTARD+AI+              +   Y          +   +TN      +
Sbjct: 181 GLHHPDHYTTARDLAIIMKEALKEPLFCQVIRTASYTMESTNLSPERTLSSTNRLLSSSS 240

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSAS----LLS 261
              +    G KTG T ++G NIV +A + ++S+I V  G         + + +    L +
Sbjct: 241 TYFYPPCLGGKTGTTKSAGKNIVFAAEKNNRSIIVVAAGYFGPAAQLYQDAIAVCEDLFN 300

Query: 262 ----MGF-----YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
                 F        + + K   I     Q    +  P+  + + +   E       +++
Sbjct: 301 EQLLRCFLLPPASQYSVKTKFGPITAPVSQGIYYDFYPSEGDPLLSLSLESSKIAFPIRQ 360

Query: 313 AKDK 316
               
Sbjct: 361 GDLL 364


>gi|320176628|gb|EFW51670.1| Murein-DD-endopeptidase [Shigella dysenteriae CDC 74-1112]
          Length = 297

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 23  PEIASGSVMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|293400361|ref|ZP_06644507.1| putative D-alanyl-D-alanine carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291306761|gb|EFE48004.1| putative D-alanyl-D-alanine carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 416

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 70/353 (19%), Positives = 128/353 (36%), Gaps = 25/353 (7%)

Query: 1   MRQFLVIIAMAMLSNIF---------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           MR+  + + ++    +             +IA T K     +++ +T  ++         
Sbjct: 1   MRKLFLSMLLSCFLVMNMNVLHAKENTQDTIAATLKSKDVIVMNRDTKEILFAKNIKKRI 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS+TK+MTA VV    K    ++    + +K   +     +    G  M + +AL  +
Sbjct: 61  YPASMTKIMTAIVVIENTKHFDKIVEAVPSDTKVIRDEASI-AGLLIGERMRIQDALSCM 119

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S +D A  +A       K FV  MNN +K L L  THF N +G     HYTT +DMA
Sbjct: 120 MLASGSDAAKMLARYTTGNTKDFVDLMNNKAKELHLQDTHFTNVYGKYDKQHYTTVKDMA 179

Query: 172 ----ILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLGADGMKTGFTC 222
                                +IK         +   Y   + A        G K+G   
Sbjct: 180 LLMDYAMENPIFQKIVASDQVKIKTNAFEERIAENFVYATFDKAKLDHSYITGAKSGSMD 239

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNK---VSASLLSMGFYNKTDRKKINYIIKD 279
            +G N+ ++A +  + ++ V   A            +A L    F N   +         
Sbjct: 240 ETGLNLASTAEKDGRRVVIVSAEAPIDEKHTNHVVDAAHLYQWYFTNYQKKIIYKKGDTV 299

Query: 280 FYQQNL---SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             + N+   S  V   S+      + + N   +   + +++      + + +L
Sbjct: 300 AIKGNILTPSFHVALPSDIYIEAPQGVFNAYEKTFVSTNQKMIVKPNDVVGIL 352


>gi|289809759|ref|ZP_06540388.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 278

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS+TKLMTA VV         +L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
            LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 ALGMTHTRFVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|169827289|ref|YP_001697447.1| D-alanyl-D-alanine carboxypeptidase [Lysinibacillus sphaericus
           C3-41]
 gi|168991777|gb|ACA39317.1| Penicillin-binding protein 5* precursor (D-alanyl-D-alanine
           carboxypeptidase) [Lysinibacillus sphaericus C3-41]
          Length = 348

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 79/353 (22%), Positives = 138/353 (39%), Gaps = 36/353 (10%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ + +L  I P  S A       Y +LD  TG V+  +  +     ASLTK+ TA V  
Sbjct: 1   MLMIIVLMVILPQSSFARG--GSGYAVLDGETGRVLIGSNSNERLPIASLTKIWTALVAI 58

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                    L   + IS  A+    S+   + G T+T++  L  L+++S ND A A+AE 
Sbjct: 59  ENSD-----LQEEVVISPKAAMAEGSSIYLQAGETVTVETLLYGLMLRSGNDAATALAEH 113

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQY 184
           +  + + FV+ MN  +   GL+ T FMN  G+    H ++ARD A +      +  F + 
Sbjct: 114 VGGSVEGFVKLMNERAVIAGLTNTVFMNPSGLHHEEHLSSARDTAEMLRVALQNKTFEKI 173

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG----------------------ADGMKTGFTC 222
                 K   + G  + N +  +    G                      A   KTGFT 
Sbjct: 174 ASTVLYKANTVNGMLWENKHRLLREGSGMAAEIDDETEQPVSSLKSATGVAYAGKTGFTK 233

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G  +  +  +  Q+ I V L   D      V  S  +  + +      +     +  +
Sbjct: 234 VAGRTLATAFQKDGQTCIVVTLNESDD---WNVHRSFSNQVWRDYDLETVVKKGKYNVNK 290

Query: 283 QNLSNEVPNISEEVCTTQKEIIN--YNTQMKEAKDKESHFIDFEKITLLKNKI 333
           +        +  ++   +KE +    +   K  +   S F+  E+I  +  K+
Sbjct: 291 KLAIRLEEPVRLQLNKEEKEQVRQVLHVSRKRQEAVLSIFLGEERIYAIPVKV 343


>gi|333026656|ref|ZP_08454720.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
 gi|332746508|gb|EGJ76949.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
          Length = 496

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 50/328 (15%)

Query: 10  MAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TA 62
           +A+        + A           + + D  +G ++A   P     PAS  K++   T 
Sbjct: 47  LALPGTQVAPGAGAPKLPKKLTARSWVVADAESGEILAARNPHWKLAPASTLKMLFADTL 106

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              FS  K  +  L     I + +S              + L   L+          AV 
Sbjct: 107 LPKFSKDKVHQVTLKDLDGIGEGSSLVGIKEDLPYSVHDLWLGVFLRSGND------AVH 160

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  S+     + V+ M   +  L  + TH +   G    G  ++A D+ + +     + P
Sbjct: 161 VLSSMNNGVAQTVRDMQARAHELQANDTHVVTPDGYDAKGQVSSAYDLTLFARDGLKN-P 219

Query: 183 QYMHYFQIKGLEI----------------------------KGKKYPNTNW------AVG 208
            +  Y      +                             +     NTN        + 
Sbjct: 220 DFREYCSTAEAQFPGEFAKKKKDKDKKKATDGQAGPEQRPREHFGIQNTNRLLTGTYDLK 279

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--ALDRNTRNKVSASLLSMGFYN 266
            + G  G+K G T  +G    A A +GD+ L+  ++     +     + +A LL  GF  
Sbjct: 280 PYQGIAGVKNGNTTNAGATYTAYAQRGDRKLLVTVMHPDYDESQAVYREAARLLDWGFAA 339

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISE 294
                 +  ++          +    + 
Sbjct: 340 DGKVTPVGELVPPRGVVAERAKASKEAA 367


>gi|227549943|ref|ZP_03979992.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227077959|gb|EEI15922.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 421

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 12/252 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           ++ E      + + D +TG V+A   P   + PAS+ K++ A V           L   +
Sbjct: 87  AVGEEVLASAWLVADLDTGEVVAMKDPHGRYRPASIIKVLLALVAIDE-----LPLDKQV 141

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           T+S  ++    S +    G   T+++ L  L++ S ND A A+A+ L   ++  +Q +N 
Sbjct: 142 TVSAESANMEGSAAGIGAGGVYTVNDLLHGLLMASGNDTAHALAQEL-GGDEATLQKVNA 200

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG--- 197
            ++ LG++ T      G+ + G  ++A DMA+       +                    
Sbjct: 201 LAQQLGMNDTRVATYTGLDRPGMSSSAWDMALAYRAAFGNETFARIVDTQSYPFPGFDDL 260

Query: 198 --KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NK 254
              +  N N          G KTG+T  +    V +     + L+AV+L       R  +
Sbjct: 261 PGFELWNDNALYLNDPEGIGGKTGYTDDANHTFVGAVNHDGRRLVAVVLDTTVNKARAWQ 320

Query: 255 VSASLLSMGFYN 266
            +  LL   +  
Sbjct: 321 QAQQLLHESYRF 332


>gi|194289422|ref|YP_002005329.1| d-alanyl-d-alanine carboxypeptidase [Cupriavidus taiwanensis LMG
           19424]
 gi|193223257|emb|CAQ69262.1| putative D-Alanyl-D-alanine carboxypeptidase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 378

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   +     ++D N+  V+ +         AS+TKLMTA VV       +  +   +TI
Sbjct: 102 ALALRSSVALVMDQNSNEVLFQKNASAVLPIASITKLMTALVVMDS----RLPMDEVLTI 157

Query: 83  SKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           ++   +    +S+  +  + +T    L L ++ S N  A A+          FVQ MN  
Sbjct: 158 TEEDRDTEKHSSSRLRFGTQLTRQELLLLALMSSENRAASALGRHYPGGLPAFVQAMNRK 217

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKK 199
           ++ LG++ +HF+++ G+      +    + +++   +    +         + +  + + 
Sbjct: 218 ARELGMNDSHFVDSSGLSSSNVSSATDLVRMVNAAYRNPTIREFSTQTEHEVNVLGRTQH 277

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y +TN  V       G  KTGF   +G  +V  A    ++++ V L +  + +R   +  
Sbjct: 278 YVSTNRLVRGGNWEIGLQKTGFISEAGQCLVMQARVQGRNVVMVFLDSAGKLSRFADANR 337

Query: 259 LLSM 262
           +   
Sbjct: 338 VKDW 341


>gi|205359523|ref|ZP_02830125.2| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205345065|gb|EDZ31829.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
          Length = 302

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS+TKLMTA VV         +L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
            LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 ALGMTHTRFVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTMINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|167919694|ref|ZP_02506785.1| family S11 unassigned peptidase [Burkholderia pseudomallei BCC215]
          Length = 362

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 101 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 156

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 157 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 216

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 217 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 274

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 275 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 334

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 335 ADASRVRNW 343


>gi|254191392|ref|ZP_04897896.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254209371|ref|ZP_04915717.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei JHU]
 gi|147750144|gb|EDK57215.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei JHU]
 gi|157939064|gb|EDO94734.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 362

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 101 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 156

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 157 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 216

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 217 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 274

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 275 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 334

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 335 ADASRVRNW 343


>gi|126455216|ref|YP_001066916.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134277355|ref|ZP_01764070.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|167824963|ref|ZP_02456434.1| family S11 unassigned peptidase [Burkholderia pseudomallei 9]
 gi|217420719|ref|ZP_03452224.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|226195535|ref|ZP_03791123.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|242314261|ref|ZP_04813277.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254184359|ref|ZP_04890949.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1655]
 gi|254195825|ref|ZP_04902251.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei S13]
 gi|254200295|ref|ZP_04906661.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei FMH]
 gi|254258254|ref|ZP_04949308.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254297022|ref|ZP_04964475.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 406e]
 gi|126228858|gb|ABN92398.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134251005|gb|EBA51084.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|147749891|gb|EDK56965.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei FMH]
 gi|157807411|gb|EDO84581.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 406e]
 gi|169652570|gb|EDS85263.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei S13]
 gi|184214890|gb|EDU11933.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1655]
 gi|217396131|gb|EEC36148.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|225932495|gb|EEH28494.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|242137500|gb|EES23902.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
 gi|254216943|gb|EET06327.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 369

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 108 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 163

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 164 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 223

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 224 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 281

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 282 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 341

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 342 ADASRVRNW 350


>gi|126439318|ref|YP_001059634.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 668]
 gi|126218811|gb|ABN82317.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           668]
          Length = 369

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 108 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 163

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 164 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 223

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 224 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 281

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 282 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 341

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 342 ADASRVRNW 350


>gi|53723811|ref|YP_103337.1| D-alanyl-D-alanine endopeptidase [Burkholderia mallei ATCC 23344]
 gi|76810679|ref|YP_334127.1| peptidase [Burkholderia pseudomallei 1710b]
 gi|52427234|gb|AAU47827.1| D-alanyl-D-alanine endopeptidase, putative [Burkholderia mallei
           ATCC 23344]
 gi|76580132|gb|ABA49607.1| family S11 unassigned peptidase [Burkholderia pseudomallei 1710b]
          Length = 394

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 133 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 188

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 189 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 248

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 249 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 306

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 307 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 366

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 367 ADASRVRNW 375


>gi|53719907|ref|YP_108893.1| peptidase [Burkholderia pseudomallei K96243]
 gi|121599737|ref|YP_993538.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei
           SAVP1]
 gi|126450244|ref|YP_001081045.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei NCTC
           10247]
 gi|237813026|ref|YP_002897477.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|238561630|ref|ZP_00441759.2| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|52210321|emb|CAH36300.1| family S11 unassigned peptidase [Burkholderia pseudomallei K96243]
 gi|121228547|gb|ABM51065.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei
           SAVP1]
 gi|126243114|gb|ABO06207.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei NCTC
           10247]
 gi|237503680|gb|ACQ95998.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|238524246|gb|EEP87680.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
          Length = 359

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 98  TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 153

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 154 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 213

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 214 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 271

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 272 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 331

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 332 ADASRVRNW 340


>gi|124386303|ref|YP_001029035.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei NCTC
           10229]
 gi|167000634|ref|ZP_02266445.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei
           PRL-20]
 gi|167720361|ref|ZP_02403597.1| family S11 unassigned peptidase [Burkholderia pseudomallei DM98]
 gi|167739353|ref|ZP_02412127.1| family S11 unassigned peptidase [Burkholderia pseudomallei 14]
 gi|167816568|ref|ZP_02448248.1| family S11 unassigned peptidase [Burkholderia pseudomallei 91]
 gi|167846481|ref|ZP_02471989.1| family S11 unassigned peptidase [Burkholderia pseudomallei B7210]
 gi|167895058|ref|ZP_02482460.1| family S11 unassigned peptidase [Burkholderia pseudomallei 7894]
 gi|167903445|ref|ZP_02490650.1| family S11 unassigned peptidase [Burkholderia pseudomallei NCTC
           13177]
 gi|167911694|ref|ZP_02498785.1| family S11 unassigned peptidase [Burkholderia pseudomallei 112]
 gi|254177821|ref|ZP_04884476.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei ATCC
           10399]
 gi|254357958|ref|ZP_04974231.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei
           2002721280]
 gi|124294323|gb|ABN03592.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei NCTC
           10229]
 gi|148027085|gb|EDK85106.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei
           2002721280]
 gi|160698860|gb|EDP88830.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei ATCC
           10399]
 gi|243063443|gb|EES45629.1| putative D-alanyl-D-alanine endopeptidase [Burkholderia mallei
           PRL-20]
          Length = 363

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 102 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKSP----LTDQ 157

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 158 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 217

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 218 NAKAKSLGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 275

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 276 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 335

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 336 ADASRVRNW 344


>gi|120403175|ref|YP_953004.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955993|gb|ABM12998.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Mycobacterium
           vanbaalenii PYR-1]
          Length = 278

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 88/242 (36%), Gaps = 11/242 (4%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               + + D +TG V+A   P   + PAS  K++ A  V                 +++ 
Sbjct: 45  PAEAWLVADLDTGRVLASKNPYGTYAPASTIKVLLAMTVLDH-----LRPDNFARANESH 99

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    S    + G   T    +  +++ S ND A  +A+ L          MN  +  +G
Sbjct: 100 TRVECSCVGLQPGQAYTTAQLVAAILMVSGNDAANMLADMLGGQRVAV-AAMNRKAALVG 158

Query: 147 LSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
             +T   +  G+        TT  D+A++       +P      +       GK   N N
Sbjct: 159 ARSTRASSPSGLDGPGWESVTTPHDLAVIMRAAL-KYPLIAQIMRSPSAPFPGKTLHNQN 217

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +  + G    KTGFT  +    V +A +G++ L+ V +           +  LL  GF
Sbjct: 218 ELLSRYPGDLAGKTGFTNLARKTYVGAAQRGNRRLVVVQMYGTG--DLYGHAIRLLDYGF 275

Query: 265 YN 266
             
Sbjct: 276 SQ 277


>gi|194449016|ref|YP_002046221.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469108|ref|ZP_03075092.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736053|ref|YP_002115257.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197262067|ref|ZP_03162141.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197300824|ref|ZP_02661392.2| D-alanyl-D-alanine endopeptidase (DD-endopeptidase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197361849|ref|YP_002141485.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244375|ref|YP_002216252.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200387930|ref|ZP_03214542.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204929084|ref|ZP_03220227.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205353306|ref|YP_002227107.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205357645|ref|ZP_02572191.2| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205358255|ref|ZP_02654578.2| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205360216|ref|ZP_02681467.2| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|213584224|ref|ZP_03366050.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647182|ref|ZP_03377235.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852329|ref|ZP_03381861.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|194407320|gb|ACF67539.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194455472|gb|EDX44311.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711555|gb|ACF90776.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197093325|emb|CAR58773.1| penicillin-binding protein 7 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197240322|gb|EDY22942.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197290536|gb|EDY29891.1| D-alanyl-D-alanine endopeptidase (DD-endopeptidase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197938891|gb|ACH76224.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605028|gb|EDZ03573.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204321628|gb|EDZ06827.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205273087|emb|CAR38040.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205330584|gb|EDZ17348.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205335922|gb|EDZ22686.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205350646|gb|EDZ37277.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|261247382|emb|CBG25207.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301158730|emb|CBW18242.1| penicillin-binding protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 302

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS+TKLMTA VV         +L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
            LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 ALGMTHTRFVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|253582538|ref|ZP_04859760.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium varium ATCC
           27725]
 gi|251835683|gb|EES64222.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium varium ATCC
           27725]
          Length = 378

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 130/348 (37%), Gaps = 18/348 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--------KLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ + ++ + ++       +    +              LL  + G +      D  + 
Sbjct: 1   MKKIINVLLLTIILASSTVFAKEVESEVVVKEEKPSYKAILLGDDKGKIYYSENIDEKYP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            ASLTK+MT  V F  L++    +   I +SK +++   S    K+G   TL++ +K   
Sbjct: 61  LASLTKMMTLMVTFDQLEKGSIKMKDKIKVSKKSAQTGGSRIPMKEGEVFTLEDLIKATA 120

Query: 113 VKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSAT-HFMNAHGVVQH----GHYTT 166
           + SAN+ A AIAE +      KFV+ MN  S +LGL     F    G+       G  + 
Sbjct: 121 IYSANNAAYAIAEYIGKGDVDKFVKMMNKKSIDLGLEKELEFYTPAGLPSDMTKKGMDSG 180

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASG 225
                         + QYM    +K   I   K    N  +     G  G+KTG     G
Sbjct: 181 TTRGIYKLSLEAAKYSQYMDIASMKEATIHDGKLKIKNRNLLLGEEGIYGIKTGHHSKVG 240

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ-- 283
           +NI   + +    +  V++G      R++     +   + +   RK  +  I        
Sbjct: 241 YNISVLSDKESMQIFTVVVGGPTYKKRDESVLKKMEEFYEHYQFRKLTDKNIAIAKVPIF 300

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
           +   E  ++  +   T     + + ++   ++K +     E   +L  
Sbjct: 301 SGDKEYADLYPDKSFTDILNKDSDIKISIKRNKGAI-APVEAGKVLGE 347


>gi|228936311|ref|ZP_04099110.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823427|gb|EEM69260.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 273

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 9   FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 124 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 183

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVGEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 271


>gi|225568832|ref|ZP_03777857.1| hypothetical protein CLOHYLEM_04911 [Clostridium hylemonae DSM
           15053]
 gi|225162331|gb|EEG74950.1| hypothetical protein CLOHYLEM_04911 [Clostridium hylemonae DSM
           15053]
          Length = 348

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 11/249 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           S+  P     +    P   L+D +TG  IA N  D    PASLTK+MTA +     +   
Sbjct: 76  SSASPLTVDLKNLYSPSAVLVDLDTGKTIAGNNSDDTIYPASLTKIMTAILAVEKTENLD 135

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
            ++T P    +N      S + F+ G  + L + L  +++ S  +  +A A+ +  +E+ 
Sbjct: 136 EIITLPYDFFQNLYAEEASMAGFEPGEAVCLRDLLYGILLPSGAECCLAFADKIAGSEED 195

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG- 192
           FV+ MN  ++ LG+  T F N+ G+    HY+T  D+A+L      +      +   +  
Sbjct: 196 FVKLMNKKAEALGMEHTQFCNSTGLHDDEHYSTVEDLALLLKYALGNDDFREAFTASRHS 255

Query: 193 ----------LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                            + N + A  T     G KTG+T  +G  + + A    +  I V
Sbjct: 256 TRPSAQHPGGFTFYSTMFENMSSAKVTGGEILGGKTGYTKEAGLCLASLADVNGKEYILV 315

Query: 243 ILGALDRNT 251
              A   + 
Sbjct: 316 TAKADGNHD 324


>gi|290958013|ref|YP_003489195.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260647539|emb|CBG70644.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei
           87.22]
          Length = 492

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 94/294 (31%), Gaps = 30/294 (10%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAM 75
              + +      + + D  +G V+A +       PAS  K++   T    F+   E K +
Sbjct: 139 APVLPKGISARSWIVADAESGDVLAAHNAHWRLAPASTLKMLFADTLLPKFNKDDEHKVL 198

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                 I   +S              + L   L+          AV +  ++    K+ V
Sbjct: 199 PADLAGIGAGSSMVGIKEDEKYTVHDLWLGVFLRSGND------AVHVLSAMNGGVKQTV 252

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
             MN  ++ L    TH ++  G    G  ++A D+ + +           +   ++    
Sbjct: 253 ADMNEHAEELQALDTHAVSPDGYDAKGQVSSAYDLTLFARSGLQKKDFREYCSTVRAKFP 312

Query: 196 KGKK-------------YPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              K               NTN        + ++ G  G+K G T  +G      A +  
Sbjct: 313 GETKKGKNGKKSRSSFEIQNTNRLLTGDSGLDSYQGIAGVKNGNTTNAGATFTGVAERDG 372

Query: 237 QSLIAVILGALD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
           + L+  ++       N   K +ASLL  GF        +  ++     +     
Sbjct: 373 RVLLVTVMHPEKNEHNQVYKETASLLDWGFKASGKVTPVGELVPPKSAETSGGS 426


>gi|257066773|ref|YP_003153029.1| Serine-type D-Ala-D-Ala carboxypeptidase [Anaerococcus prevotii DSM
           20548]
 gi|256798653|gb|ACV29308.1| Serine-type D-Ala-D-Ala carboxypeptidase [Anaerococcus prevotii DSM
           20548]
          Length = 403

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 25/326 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS- 83
            + +  Y + +   G +  E   D     ASLTKLMT  +V   +   K  L T +    
Sbjct: 35  DDNVTAYLIGNQENGDIYYEKNADEALPMASLTKLMTFLLVRDAMDAGKIDLNTSVKADK 94

Query: 84  --KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
             +  + +  S    K+  + +++  L+ LI  S ND A  +A+++  +E KF Q MN  
Sbjct: 95  RAEELTSWEYSALGLKENESYSVEELLQGLIAVSGNDCAHLLAKTVAGSEDKFAQMMNQK 154

Query: 142 SKNLGLSATHFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +K+LGL++  + NA G+       + ++ARD+  LS  I   +P  + Y  +  + I GK
Sbjct: 155 AKDLGLTSQKYYNASGIGTDDGKENKSSARDLFKLSSEIVKKYPDILRYSTMDEVNIPGK 214

Query: 199 KYPNT--NWAVGTFLGADGMKTGFTCASGFNIVASAIQ------GDQSLIAVILGALDRN 250
                      G   G DG+KTG T  +G+ +V +          +   I V++GA  ++
Sbjct: 215 GIRKNSTIPLRGEIKGVDGLKTGTTDQAGYCLVTTTDMKELDGNDEFRTIGVVMGADQKD 274

Query: 251 TRNKVSASLLSMGFYNKT------DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
           TR+ V + L+       +        K ++ I +   +Q      P   E +    K+  
Sbjct: 275 TRDSVMSDLIYYVSRYYSCEKVLDTNKSLDTIDEISAKQGYIELYPK--ENLSIISKDDK 332

Query: 305 NYNTQMKEAKDKESHFIDFEKITLLK 330
              T++     K+      ++  +L 
Sbjct: 333 KVATKI---SLKDKIKAPIKEGEVLG 355


>gi|206976429|ref|ZP_03237336.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|217962480|ref|YP_002341052.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|229141730|ref|ZP_04270260.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
 gi|206745353|gb|EDZ56753.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           H3081.97]
 gi|217066911|gb|ACJ81161.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH187]
 gi|228641798|gb|EEK98099.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
          Length = 279

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGRYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVITVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|323168727|gb|EFZ54407.1| D-alanyl-D-alanine endopeptidase [Shigella sonnei 53G]
          Length = 298

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 23  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 82

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 83  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 139

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 140 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 198

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 199 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 258

Query: 258 SLLSM 262
            L + 
Sbjct: 259 RLRTW 263


>gi|302558857|ref|ZP_07311199.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302476475|gb|EFL39568.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 458

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 91/282 (32%), Gaps = 26/282 (9%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             + +      + + D  +G V+A +       PAS  K++ A  +     +        
Sbjct: 100 PVLPKGLSGRSWIVADAESGDVLAAHNAHWRLAPASTLKMLFADTLLPKWPK---TTEHK 156

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +  S  A     S+    K       + L L +   + + AV +  ++    K  V  MN
Sbjct: 157 VEPSDMAGIGSGSSMVGIKEDETYSVHDLWLGVFLRSGNDAVHVLSAMNGGVKNTVDEMN 216

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
             ++ L    TH ++  G       ++A D+ + +         +  Y      +     
Sbjct: 217 AHAEELQALDTHVVSPDGYDAPEQVSSAYDLTLFARSGMQK-KDFREYCSTVSAKFPGET 275

Query: 196 ----------KGKKYPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                        +  NTN        V  + G  G+K G T  +G      A +  + L
Sbjct: 276 KKNKKGKKVRGSFEIQNTNRLLAGDYDVPVYQGIAGVKNGNTTNAGATFTGVAERDGKVL 335

Query: 240 IAVILGALD--RNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +  ++       N   K +A L   GF      + +  ++  
Sbjct: 336 LVTVMNPRTNESNEVYKETAKLFDWGFEAAGKVEPVGELVPP 377


>gi|317491244|ref|ZP_07949680.1| D-alanyl-D-alanine carboxypeptidase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920791|gb|EFV42114.1| D-alanyl-D-alanine carboxypeptidase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 315

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 100/254 (39%), Gaps = 10/254 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 + +         ++D  T +VI  + PD     AS+TKLMTA V          
Sbjct: 32  APTTHNASSLVLASGSAMVVDLKTHNVIYSSNPDVQVPIASITKLMTAMVALDAKPAMDE 91

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           +++  I  +K         S  + GS ++    + + ++ S N  A ++A         F
Sbjct: 92  VISVDIHNTKEL---KGVFSRVRVGSEVSRRQMMLMALMSSENRAAASLAHHYPGGYNAF 148

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQ 189
           ++ MN  +++LG++ T ++   G+    + +TARD+  L     ++ + +          
Sbjct: 149 IKAMNAKARSLGMTHTRYVEPTGL-SVKNVSTARDLTKLLAASKNYPLISQLSTTETQSV 207

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                +  + + NTN  V     A    KTGFT  +G  +      G + +  V+L A  
Sbjct: 208 TFSNPVYTETFNNTNHLVRNDKWAIQLTKTGFTNQAGHCLAMRTTIGGRQVALVVLDAFG 267

Query: 249 RNTRNKVSASLLSM 262
           + T    +  L   
Sbjct: 268 KYTHFADANRLRDW 281


>gi|255281347|ref|ZP_05345902.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
 gi|255268304|gb|EET61509.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
          Length = 398

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 9/235 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
              P   LLD  TG ++AE        PASLTK+MTA ++  +          P  I   
Sbjct: 147 LYSPCAVLLDAGTGEMLAEKNGSAQMYPASLTKIMTALLLVEYCGNLDGTAWIPTDIYDQ 206

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S + F  G  +TL + L  +++ S  +  +  A  +  +E+ FVQ MN  +  L
Sbjct: 207 LYAEGASVAGFLPGEEVTLRDLLYGILLPSGAECCLTAARYIAGSEESFVQIMNQRAAEL 266

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G++ THF N+ G+    HY++A D+A L      +      +          +++P    
Sbjct: 267 GMTNTHFTNSTGLQDAQHYSSAEDIAALLQYALQNASFREAFTSEYYYVQPTQEHPEGFT 326

Query: 206 AVGT---------FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
              T              G KTG+T  +G  + +    G +  I V  GA   + 
Sbjct: 327 FWSTLFSQAQASGDDRILGGKTGYTQEAGLCLASLLRVGGREYILVTAGAPGSHE 381


>gi|71065270|ref|YP_263997.1| murein-DD-endopeptidase [Psychrobacter arcticus 273-4]
 gi|71038255|gb|AAZ18563.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Psychrobacter arcticus 273-4]
          Length = 363

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 95/252 (37%), Gaps = 19/252 (7%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF--LKEKKAMLTTP 79
           I  +       ++D  TG  I E   D     AS+TK+MTA VV        ++  L   
Sbjct: 111 IPISTDSRSVAVIDAETGESIYEKDADIARPMASITKVMTAMVVLDAGLDMREELTLDPE 170

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             +         ++S  K G  +     L + ++KS N  A ++A +       F++ MN
Sbjct: 171 DFVGPKR-----ASSNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFMRAMN 225

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG+S   F +  G+    +  ++ D+  +      ++     +   K  +     
Sbjct: 226 RKAQELGMSTAFFGDPTGL-DKRNIASSNDLVKMVR-AAGNYDVIRRFSTTKSYDFFVSN 283

Query: 200 YPNTNWAVGTFLG----------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           Y + N                      KTGF   +G  +V      ++  I VILGA   
Sbjct: 284 YASGNRTYKANNTSSLVRDGSYPIGISKTGFINEAGRCVVMETRVNNRPAIIVILGANSS 343

Query: 250 NTRNKVSASLLS 261
            TR   + ++L+
Sbjct: 344 ATRWGDAKNILN 355


>gi|269127199|ref|YP_003300569.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Thermomonospora curvata DSM 43183]
 gi|268312157|gb|ACY98531.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Thermomonospora curvata DSM 43183]
          Length = 305

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 17/294 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           R  + ++   +L ++    + A        K     L +     +             S+
Sbjct: 8   RIIVPLVGATLLISVPAAPAAAAGAGPSGVKARSALLYEPAKRKIRWHRAGGTKRPIGSI 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK MTA VV    K  + +      I   A  +  S +  + G  +T    L+ L++ S 
Sbjct: 68  TKAMTAVVVLRSGKLDRKITIKQKHI-NYAVRHGGSMAHLRPGDKLTARQLLRALLLPSG 126

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH---YTTARDMAIL 173
            D A  +A++     + FV+ MN T++ L +  TH+ N  G+        Y+TA D   L
Sbjct: 127 CDAAYVLADAYGPGWRNFVKKMNATARALNMKKTHYANFDGLPWPTPTAGYSTALDQTKL 186

Query: 174 SWRIKTDFPQYMHYFQIKGLE------IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +       P++    + +          +   + NTN  +G+F G +G+KTG+T A+G++
Sbjct: 187 ANYAFKKLPEFRKIVRTRTYRLKAGGGHRAYTWHNTNRLLGSFKGVNGVKTGYTSAAGYS 246

Query: 228 IVASAIQGDQSLIAVILGALDRN--TRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           ++ +A +G ++LI  +L +   +   R   +A +LS GF      + +   +  
Sbjct: 247 LLFAATRGKRTLIGAVLNSSTTDSTARFTDAARILSWGFGTAAPSRLVLAPLPP 300


>gi|152999492|ref|YP_001365173.1| D-alanyl-D-alanine endopeptidase [Shewanella baltica OS185]
 gi|160874112|ref|YP_001553428.1| D-alanyl-D-alanine endopeptidase [Shewanella baltica OS195]
 gi|217972168|ref|YP_002356919.1| D-alanyl-D-alanine endopeptidase [Shewanella baltica OS223]
 gi|304410998|ref|ZP_07392614.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica OS183]
 gi|307301879|ref|ZP_07581637.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica BA175]
 gi|151364110|gb|ABS07110.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica OS185]
 gi|160859634|gb|ABX48168.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica OS195]
 gi|217497303|gb|ACK45496.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica OS223]
 gi|304350533|gb|EFM14935.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica OS183]
 gi|306913917|gb|EFN44338.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica BA175]
 gi|315266344|gb|ADT93197.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Shewanella
           baltica OS678]
          Length = 321

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 101/281 (35%), Gaps = 14/281 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +  +        ++D  T  V+  + P+     AS+TKLMTA V        K  +  
Sbjct: 45  APAKQQEVASSSAMVVDLKTNEVLYSSNPNAVVPIASVTKLMTAMVTLDA----KLAMDE 100

Query: 79  PITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + ++  +  E     S  + GS ++  + L L ++ S N  A ++A       K F++ 
Sbjct: 101 KLAVNINDTKEMRGVYSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGHKAFIKA 160

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +K LG+  T ++   G+      + +  + +L           +   + K +    
Sbjct: 161 MNAKAKALGMKNTRYVEPTGLSYKNVSSASDLIVLLKASEGYPMLGQLSSTEKKTVTFAK 220

Query: 198 KKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            +Y     NTN  V          KTGFT  +G  +V       + +  V+L A  + T 
Sbjct: 221 PRYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGHCLVMRTEMAKRQVAFVVLDAYGKYTH 280

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
              +  L +         K      +    +   ++     
Sbjct: 281 IADANRLRNW----LETGKVTPIPAEAKQYKKQRSQQQLAK 317


>gi|91792455|ref|YP_562106.1| D-alanyl-D-alanine endopeptidase [Shewanella denitrificans OS217]
 gi|91714457|gb|ABE54383.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella denitrificans OS217]
          Length = 298

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 101/263 (38%), Gaps = 10/263 (3%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +++   +        +  +        L+D NT  V+  + PD     AS+TKLMTA V 
Sbjct: 18  LVLGAILFCLSPHIYAAQQELASTSGMLVDLNTDEVLYASNPDRVMPIASVTKLMTAMVT 77

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                  +  ++  I  +K              GS ++  + L L ++ S N  A ++A 
Sbjct: 78  LDAKLPLEQKISIKINETKEMRNVYSRVRI---GSELSRKDMLLLALMSSENRAAASLAH 134

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTD 180
                   F++ MN+ +K LG++ + F+   G+    + ++ARD+ +L      + +  +
Sbjct: 135 HYPGGYAAFIRAMNDKAKALGMTKSSFVEPTGL-SRKNVSSARDLVMLLKASEGYPLLGE 193

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSL 239
                              + N+N  V          KTGFT  +G  +V       + +
Sbjct: 194 LSSTDKKTVTFSNPWYKLDFRNSNRLVFKNDWNIQLTKTGFTNDAGRCLVMRTEMNKRQV 253

Query: 240 IAVILGALDRNTRNKVSASLLSM 262
             V+L A  + T    +  L + 
Sbjct: 254 AFVVLDAFGKLTHLADANRLRNW 276


>gi|126175583|ref|YP_001051732.1| D-alanyl-D-alanine endopeptidase [Shewanella baltica OS155]
 gi|125998788|gb|ABN62863.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella baltica OS155]
          Length = 321

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 101/281 (35%), Gaps = 14/281 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +  +        ++D  T  V+  + P+     AS+TKLMTA V        K  +  
Sbjct: 45  APAKQQEVASSSAMVVDLKTNEVLYSSNPNAVVPIASVTKLMTAMVTLDA----KLAMDE 100

Query: 79  PITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            + ++  +  E     S  + GS ++  + L L ++ S N  A ++A       K F++ 
Sbjct: 101 KLAVNINDTKEMRGVYSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGHKAFIKA 160

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +K LG+  T ++   G+      + +  + +L           +   + K +    
Sbjct: 161 MNAKAKALGMKNTRYVEPTGLSYKNVSSASDLIVLLKASEGYPMLGQLSSTEKKTVTFAK 220

Query: 198 KKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            +Y     NTN  V          KTGFT  +G  +V       + +  V+L A  + T 
Sbjct: 221 PRYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGHCLVMRTEMAKRQVAFVVLDAYGKYTH 280

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
              +  L +         K      +    +   ++     
Sbjct: 281 IADANRLRNW----LETGKVTPIPAEAKQYKKQRSQQQLAK 317


>gi|239815358|ref|YP_002944268.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Variovorax
           paradoxus S110]
 gi|239801935|gb|ACS19002.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Variovorax
           paradoxus S110]
          Length = 394

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   K     ++D +T  V+           ASLTKLMT  ++              ITI
Sbjct: 131 ALDLKSSVALVIDQDTHEVLFSKNDHAVLPIASLTKLMTGLLISEA----HLPNDELITI 186

Query: 83  SKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++  +    S S    G+T++    L L ++ S N  A A+  +       FV  MN  
Sbjct: 187 TQDDVDTEKGSRSRLTVGTTLSRGELLHLALMSSENRAAHALGRTYPGGLATFVSIMNAK 246

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK--K 199
           +K LG+  T ++   G+      +      +++        + +       +E+  +  +
Sbjct: 247 AKMLGMKDTRYVEPTGLSSRNQSSAQDLALLVNAAYSDATVRSLSTSPEYQVEVGNRVLQ 306

Query: 200 YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +  TN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R   +  
Sbjct: 307 FNTTNRLVKSPDWEIGVQKTGYISEAGQCLVMQAKVAGRKLIMVFLDSAGKFSRIADAER 366

Query: 259 LLSM 262
           +   
Sbjct: 367 VRRW 370


>gi|261400432|ref|ZP_05986557.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           lactamica ATCC 23970]
 gi|269209880|gb|EEZ76335.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           lactamica ATCC 23970]
          Length = 312

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I+P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIYPADTQAITGGLILSSQSALVVNNQTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   ITI+ +  +    + S    G+++T    L L ++ S N    A
Sbjct: 108 VVLDAD----LNMDETITITPDEIDRLKGTGSRLAIGTSLTRRELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D+ ++         
Sbjct: 164 LGRTYPGGMGAFVAAMNQKAQSLGMYGSRFYEPTGL-NFHNVSTAKDLNLMVNAAVRYPL 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  +       +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRANSTSNYASVQTKNGQQNYKNSNALIREGRWRIELQKTGYIREAGRSMVVRANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|229032648|ref|ZP_04188611.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228728647|gb|EEL79660.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 301

 Score =  120 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQAVRADQPSITGQYAITIDADTGEILYGKREDERSYPASIAKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        ITI++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 97  LLLENVKE-----DEEITITENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 151

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 152 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 211

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 212 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 271

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 272 RVINVVL-SSTRTQLYPDTKKMAHYAFQQ 299


>gi|259506608|ref|ZP_05749510.1| penicillin-binding protein [Corynebacterium efficiens YS-314]
 gi|259165806|gb|EEW50360.1| penicillin-binding protein [Corynebacterium efficiens YS-314]
          Length = 438

 Score =  120 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 12/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            E      + + D ++G ++A   P   + PAS+ K +   +            T  +T 
Sbjct: 119 PENQTASAWMVFDLDSGEILAAKDPHGRYRPASIIKALIGLIAIEQ-----LDPTQKVTG 173

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           + +A+    S     +G   T+D  L  L++ S ND A  +A+ L   ++  ++ +N  +
Sbjct: 174 TWDAANIEGSRVGVGEGGEYTVDELLHGLLLASGNDAAYLLAQEL-GGDEATLEMVNERA 232

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKG 197
           + +G   T      G+   G  T+A DMA++      +                  + +G
Sbjct: 233 REIGTEDTFVATYSGLDAPGMSTSAYDMALIYQHAWKNPRFAQIVDTEFIDFPGWGDNEG 292

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVS 256
            +  N N          G KTG+T  +    V +  +  + + AVIL       R  + +
Sbjct: 293 FQVWNDNGLFMNDPDGIGGKTGYTDDANHTFVGALNREGRRIGAVILDTTIDKGRPWEQA 352

Query: 257 ASLLS 261
             L+ 
Sbjct: 353 RELID 357


>gi|25027255|ref|NP_737309.1| putative penicillin-binding protein [Corynebacterium efficiens
           YS-314]
 gi|23492536|dbj|BAC17509.1| putative penicillin-binding protein [Corynebacterium efficiens
           YS-314]
          Length = 447

 Score =  120 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 12/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            E      + + D ++G ++A   P   + PAS+ K +   +            T  +T 
Sbjct: 128 PENQTASAWMVFDLDSGEILAAKDPHGRYRPASIIKALIGLIAIEQ-----LDPTQKVTG 182

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           + +A+    S     +G   T+D  L  L++ S ND A  +A+ L   ++  ++ +N  +
Sbjct: 183 TWDAANIEGSRVGVGEGGEYTVDELLHGLLLASGNDAAYLLAQEL-GGDEATLEMVNERA 241

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKG 197
           + +G   T      G+   G  T+A DMA++      +                  + +G
Sbjct: 242 REIGTEDTFVATYSGLDAPGMSTSAYDMALIYQHAWKNPRFAQIVDTEFIDFPGWGDNEG 301

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVS 256
            +  N N          G KTG+T  +    V +  +  + + AVIL       R  + +
Sbjct: 302 FQVWNDNGLFMNDPDGIGGKTGYTDDANHTFVGALNREGRRIGAVILDTTIDKGRPWEQA 361

Query: 257 ASLLS 261
             L+ 
Sbjct: 362 RELID 366


>gi|241764854|ref|ZP_04762858.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidovorax
           delafieldii 2AN]
 gi|241365603|gb|EER60333.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidovorax
           delafieldii 2AN]
          Length = 358

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 10/249 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            ++     K     ++D +T  V+           ASLTKLMT  +V          +  
Sbjct: 96  QVNDPLDLKSSVAYVIDQDTHEVLLSKNDHAVLPIASLTKLMTGLIVTQA----HLPMDE 151

Query: 79  PITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           PITI+++  +    S S    G+T+T    L L ++ S N  A A+  +     + FV  
Sbjct: 152 PITITQDDVDTEKGSRSRLSVGTTLTRGEMLHLALMSSENRAAHALGRTYPGGLEAFVAL 211

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE--- 194
           MN+ ++++G++ T ++   G+      ++ARD+A+L      D                 
Sbjct: 212 MNSKARSIGMTDTVYVEPTGLSSRNQ-SSARDLALLVNVAHGDPVMREFSTSPGYEVAVG 270

Query: 195 IKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            K  ++ NTN  V       G  KTG+   +G  +V       + LI V L +  + +R 
Sbjct: 271 HKTLQFNNTNGLVKNPDWNIGLQKTGYISEAGRCLVMQTHIAGRKLIMVFLDSAGKFSRL 330

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 331 GDAQRVRHW 339


>gi|332754764|gb|EGJ85129.1| D-alanyl-D-alanine endopeptidase [Shigella flexneri 4343-70]
          Length = 301

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 10/245 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D NT  VI  N+PD     AS++KLMTA VV          L   I+ +
Sbjct: 26  PEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQT 85

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                     S  +  S ++  + L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 86  PE---MKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 142

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGK 198
           +LG++ T F+   G+    + +TARD+  L      + +                     
Sbjct: 143 SLGMNNTRFVEPTGL-SVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTL 201

Query: 199 KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            + NTN  V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++
Sbjct: 202 PFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADAS 261

Query: 258 SLLSM 262
            L + 
Sbjct: 262 RLRTW 266


>gi|326316983|ref|YP_004234655.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373819|gb|ADX46088.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 371

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 10/249 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            ++     K     ++D +T  V+           ASLTKLMT  ++          +  
Sbjct: 103 SVADPLDLKSSVALVIDQDTQEVLLSKNDHAVLPIASLTKLMTGLLISEAK----LPMDE 158

Query: 79  PITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           PITI+++  +    +S+     +T+T    L L ++ S N  A A+  +     + FV  
Sbjct: 159 PITITQDDVDTEKFSSSRLAVGTTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVAR 218

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN  ++ +G++ T ++   G+  H   ++ARD+A L     +D                 
Sbjct: 219 MNAKARLIGMTETRYVEPTGLSSHNQ-SSARDLATLVNVAHSDPLLRELTTSPGYEVAVG 277

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +   + NTN  V       G  KTG+   +G  +V  A    + LI V L +  + +R 
Sbjct: 278 RRTLHFNNTNRLVKNPAWDIGLQKTGYISEAGRCLVMQAHIAGRKLIMVFLDSAGKFSRL 337

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 338 GDAERVRHW 346


>gi|229158612|ref|ZP_04286671.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228624926|gb|EEK81694.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
          Length = 273

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 9   FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +F++ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 124 SIAEHIAGSKNEFLKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 183

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 271


>gi|302544633|ref|ZP_07296975.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462251|gb|EFL25344.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 426

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 94/281 (33%), Gaps = 23/281 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++ +      + + D  +G V+A +       PAS  K++ A  V     +       
Sbjct: 86  APALPKELSGKSWMVADAESGEVLASHNAHWRLPPASTLKMLFADTVLPKFPK---TQKH 142

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +  S  A     S+    K +     + L L +   + + AV +  ++       V+ M
Sbjct: 143 TVRASDLAGMGAGSSLVGVKENLDYTVHDLWLGVFLRSGNDAVHVLSAMNGGVPATVRDM 202

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
              +K L    TH +   G  + G Y++A D+ + +     +     +            
Sbjct: 203 QAKAKKLNALDTHVVTPDGYDEDGQYSSAYDLTLFARSGLQNADFREYCATSTAQFPGEY 262

Query: 199 K-------------YPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           K               NT+       +  + G  G+K G+T  +G      A +G + L+
Sbjct: 263 KKNKKGKKVRMSFGIQNTDRLLTGIDIKPYKGLAGVKNGYTSKAGSTFTGVAQRGKRVLL 322

Query: 241 AVILGALDRNTR--NKVSASLLSMGFYNKTDRKKINYIIKD 279
             ++           K +A L   GF        +  +++ 
Sbjct: 323 VTVMNPQKSEPYGVYKETAKLFDWGFDAADSVNPVGTLVRP 363


>gi|227508596|ref|ZP_03938645.1| S11 family D-Ala-D-Ala carboxypeptidase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227191928|gb|EEI71995.1| S11 family D-Ala-D-Ala carboxypeptidase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 442

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 138/365 (37%), Gaps = 42/365 (11%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNK------LPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           ++++   + + +    + A++ K           ++D  +G ++ +   D     ASL+K
Sbjct: 28  ILVLTCVIAALVPSATAQAKSKKLKYKFEAKEIYVMDAKSGQMLYQKNSDQRRPIASLSK 87

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           LMT Y+    + + +      + +SK   +   S          +    +K L   +   
Sbjct: 88  LMTLYLTKKAIDQHQLSWNQKVPVSKPLIKMSKSYELGTFKIKRSKQYTVKQLYQAALIA 147

Query: 119 IAVAIAESLCK-----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH------------ 161
            + + A +L +     +  KF+  MN  ++  G+   HF+++ G+               
Sbjct: 148 SSNSSAIALGELVAGGSNTKFINLMNRQAQKWGI-DAHFVSSSGLDNTDLTTYKLQVPGT 206

Query: 162 ----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF------L 211
                +  +A+ ++ ++ ++  +FP    + +   +++  +   N+N  +          
Sbjct: 207 GKKAQNMVSAKAISTVAAKVLGEFPSITKWSRKPSMKVGNQVLVNSNRLLKGDAFYKKSE 266

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
             DG+KTGFT  +G  +  S     + LIA I+ +   NT       L+     N T   
Sbjct: 267 HVDGLKTGFTDTAGLCLTVSFWHKGRHLIATIIDS---NTIFSSMEKLVRAIEKNYTTET 323

Query: 272 -KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             I+  I     + +S    +    +  T+    + +   +      +  +  +K + + 
Sbjct: 324 HLIHQNIFTIGNRKVSASPQDSRATIWKTESSKPSISDSYE----PTTQKLPVKKGSTVG 379

Query: 331 NKITK 335
           N + K
Sbjct: 380 NVLVK 384


>gi|228988259|ref|ZP_04148355.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229187255|ref|ZP_04314400.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228596265|gb|EEK53940.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BGSC 6E1]
 gi|228771469|gb|EEM19939.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 273

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 9   FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 124 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 183

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 271


>gi|145299285|ref|YP_001142126.1| D-alanyl-D-alanine carboxypeptidase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852057|gb|ABO90378.1| D-alanyl-D-alanine carboxypeptidase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 251

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 8/232 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + +  TG V++E   +     AS+TKLMTA VV    +     LT  +    +      
Sbjct: 1   MVANPRTGEVLSERNANRVMPIASITKLMTALVVLDANQRLSETLTVTMA---DVDRLKG 57

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           + S    GS ++  + L + ++ S N  A A+A      ++ F++ MN  +  LG+ +T 
Sbjct: 58  TGSRLAVGSRLSRADMLHIALMSSENRAASALARHYPGGQRAFIEAMNAKASMLGMWSTQ 117

Query: 152 FMNAHGVVQHGHYTTARDMAI-LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
           F ++ G+    + ++A D+A  ++        +     + + +    ++    N      
Sbjct: 118 FADSTGL-NPRNVSSAHDLAKLVAAASAYPLIRQYSATEQRMVRNGKRQLHYLNSNRLVR 176

Query: 211 LG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            G       KTG+   +G  +V +     + +I V+L A   N R   +  +
Sbjct: 177 EGSWLVTLSKTGYIREAGRCLVMATQINREPVILVLLNADTPNARVADAKRI 228


>gi|289769566|ref|ZP_06528944.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
 gi|289699765|gb|EFD67194.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 475

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 99/282 (35%), Gaps = 24/282 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D  +G V+A +       PAS  K++ A  +     +       
Sbjct: 119 APVLPKDLTARSWIVADAESGDVLAAHNAHWELAPASTLKMLFADTLLPKWPK---TTKR 175

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S  A     S+    K       + L L +   + + AV +  ++    +K V  M
Sbjct: 176 KVQVSDLAGIGSGSSMVGIKEEETYTVHDLWLGVFLRSGNDAVHVLSAMNDGVEKTVADM 235

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K L    T  ++  G    G  ++A D+ + +           +   ++       
Sbjct: 236 NAHAKELQAGDTTVVSPDGYDMPGQVSSAYDLTLFARSGLQKKDFREYASTVRAKFPGET 295

Query: 199 K-------------YPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           K               NTN        V  + G  G+K G+T  +G      A QG + L
Sbjct: 296 KKDKKGKTSREPFEIQNTNRLLAGDTDVEVYPGIAGVKNGYTTNAGNTFTGVAEQGGKVL 355

Query: 240 IAVILG-ALDR-NTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +  ++  A D+ N   K +A L   GF      + +  +++ 
Sbjct: 356 LVTVMHPAEDKHNEVYKETARLFDWGFRAAGKVRPVGELVRP 397


>gi|256785674|ref|ZP_05524105.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 424

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 99/282 (35%), Gaps = 24/282 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D  +G V+A +       PAS  K++ A  +     +       
Sbjct: 68  APVLPKDLTARSWIVADAESGDVLAAHNAHWELAPASTLKMLFADTLLPKWPK---TTKR 124

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S  A     S+    K       + L L +   + + AV +  ++    +K V  M
Sbjct: 125 KVQVSDLAGIGSGSSMVGIKEEETYTVHDLWLGVFLRSGNDAVHVLSAMNDGVEKTVADM 184

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K L    T  ++  G    G  ++A D+ + +           +   ++       
Sbjct: 185 NAHAKELQAGDTTVVSPDGYDMPGQVSSAYDLTLFARSGLQKKDFREYASTVRAKFPGET 244

Query: 199 K-------------YPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           K               NTN        V  + G  G+K G+T  +G      A QG + L
Sbjct: 245 KKDKKGKTSREPFEIQNTNRLLAGDTDVEVYPGIAGVKNGYTTNAGNTFTGVAEQGGKVL 304

Query: 240 IAVILG-ALDR-NTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +  ++  A D+ N   K +A L   GF      + +  +++ 
Sbjct: 305 LVTVMHPAEDKHNEVYKETARLFDWGFRAAGKVRPVGELVRP 346


>gi|21223223|ref|NP_629002.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces coelicolor A3(2)]
 gi|7649577|emb|CAB89066.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           coelicolor A3(2)]
          Length = 424

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 99/282 (35%), Gaps = 24/282 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +      + + D  +G V+A +       PAS  K++ A  +     +       
Sbjct: 68  APVLPKDLTARSWIVADAESGDVLAAHNAHWELAPASTLKMLFADTLLPKWPK---TTKR 124

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S  A     S+    K       + L L +   + + AV +  ++    +K V  M
Sbjct: 125 KVQVSDLAGIGSGSSMVGIKEEETYTVHDLWLGVFLRSGNDAVHVLSAMNDGVEKTVADM 184

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K L    T  ++  G    G  ++A D+ + +           +   ++       
Sbjct: 185 NAHAKELQAGDTTVVSPDGYDMPGQVSSAYDLTLFARSGLQKKDFREYASTVRAKFPGET 244

Query: 199 K-------------YPNTNW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           K               NTN        V  + G  G+K G+T  +G      A QG + L
Sbjct: 245 KKDKKGKTSREPFEIQNTNRLLAGDADVEVYPGIAGVKNGYTTNAGNTFTGVAEQGGKVL 304

Query: 240 IAVILG-ALDR-NTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +  ++  A D+ N   K +A L   GF      + +  +++ 
Sbjct: 305 LVTVMHPAEDKHNEVYKETARLFDWGFRAAGKVRPVGELVRP 346


>gi|269139886|ref|YP_003296587.1| D-alanyl-D-alanine endopeptidase [Edwardsiella tarda EIB202]
 gi|267985547|gb|ACY85376.1| D-alanyl-D-alanine endopeptidase [Edwardsiella tarda EIB202]
 gi|304559723|gb|ADM42387.1| Murein-DD-endopeptidase [Edwardsiella tarda FL6-60]
          Length = 309

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 12/240 (5%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++D N   VI  ++PD     AS+TKLMTA V           L   I +  + ++ 
Sbjct: 46  SAMVVDMNNHQVIYASHPDVQVPIASITKLMTAMVTLDAHP----NLDEVIAVDIHRTKE 101

Query: 90  -PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                S  + GS +T    L L ++ S N  A  +A         F++ MN  ++ LG++
Sbjct: 102 LKGVFSRVRVGSELTRRQMLLLALMSSENRAAATLAHHYPGGYDAFIRAMNAKARALGMT 161

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-YMHYFQIKGLEIKGKKYP----NT 203
            TH++   G+    + ++ARD+  L    K       +   + K +      Y     NT
Sbjct: 162 RTHYVEPTGL-SPNNVSSARDLVKLLQAAKGYPLIGELSTTETKSVTFAHPTYTETFNNT 220

Query: 204 NWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           N  +          KTGFT  +G  +    + G + +  V+L A  + T    +  L   
Sbjct: 221 NHLLRNDKWNIQMTKTGFTNQAGHCLAMRTVIGGRPVALVVLDAFGKYTHFADANRLREW 280


>gi|313668773|ref|YP_004049057.1| D-alanyl-D-alanine-endopeptidase [Neisseria lactamica ST-640]
 gi|309378137|emb|CBX23227.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313006235|emb|CBN87697.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria lactamica
           020-06]
          Length = 312

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I+P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIYPTDTQAITGGLILSSQSALVVNNQTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   ITI+ +  +    + S    G+++T    L L ++ S N    A
Sbjct: 108 VVLDAD----LNMDETITITPDEIDRLKGTGSRLAIGTSLTRRELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D+ ++         
Sbjct: 164 LGRTYPGGMGAFVAAMNQKAQSLGMYGSRFYEPTGL-NFHNVSTAKDLNLMVNAAVRYPL 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  +       +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRANSTSNYASVQTKNGQQNYKNSNALIREGRWRIELQKTGYIREAGRSMVVRANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|328914259|gb|AEB55092.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila psittaci 6BC]
          Length = 412

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 120/341 (35%), Gaps = 40/341 (11%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEKKAMLTT 78
              +     ++   TG V+     D    PAS+TK+ TA  +         +        
Sbjct: 8   PETRGNAVAVVHAETGKVLYAKDIDKRIYPASMTKIATALFILKKHPDVLNRFIIVKPDA 67

Query: 79  PITISKNASEYPPSNSTFKK------------GSTMTLDNALKLLIVKSANDIAVAIAES 126
             +I+  A +     S                   ++  +    L++ SAND A A+A +
Sbjct: 68  IASITPQAKKQSGYRSPPHWLETDGVTIQLQNKEEVSGWDLFHALLICSANDAANALAIA 127

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----- 181
              +  +F++ +N+  + +G + THF N HG+    HYTTA D+  +      +      
Sbjct: 128 CSGSVVEFMKQLNDFLREIGCAHTHFNNPHGLHHPNHYTTAGDLTRIMREGLKEPLFRQV 187

Query: 182 --PQYMHYFQIKGLEIKGKKYPNT---NWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
                         + +     N      +   +  A G KTG T  +G N+V +A +  
Sbjct: 188 IRTTNYKMAPTNLSQERILNLTNKLILPGSTYYYPPALGGKTGTTKDAGKNLVFAAKKHG 247

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
           +S+I +  G    +   +   +L    F  +  R+ +    + +  +        +  ++
Sbjct: 248 RSIITIAAGYSVMSELYEDVIALCEGVFNEQPLRRYLIPPTEKYTLR------LGLLGKI 301

Query: 297 CTTQKEIINYNTQMKEAKDKESH-------FIDFEKITLLK 330
                  + Y+    E ++ ++         +   K  LL 
Sbjct: 302 SIPLPHGVYYDFYASEGEEPKTLSFVPHATKLPIHKGDLLG 342


>gi|153826719|ref|ZP_01979386.1| penicillin-binding protein 5 [Vibrio cholerae MZO-2]
 gi|149739506|gb|EDM53740.1| penicillin-binding protein 5 [Vibrio cholerae MZO-2]
          Length = 194

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 10/188 (5%)

Query: 3   QFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +FLV  +MA       +  +    +          Y L+D +TG V+ E+      NPAS
Sbjct: 5   KFLVRFSMACMAFVPTLGFSALTVVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLI 112
           LTKLMT+YV    +K         + IS NA        S    + G+ + L +  + LI
Sbjct: 65  LTKLMTSYVAGQEMKRGNIHADDKVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLI 124

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           V+S ND +VAIAE +  +E  FV  MN+ ++ LG++ + F N HG+     Y+T  D+A+
Sbjct: 125 VQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIAL 184

Query: 173 LSWRIKTD 180
           L   I  D
Sbjct: 185 LGRAIIRD 192


>gi|318076420|ref|ZP_07983752.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actF]
          Length = 374

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 50/328 (15%)

Query: 10  MAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TA 62
           +A+        + A           + + D  +G ++A   P     PAS  K++   T 
Sbjct: 47  LALPGTQVAPGAGAPKLPKKLTARSWVVADAESGEILAARNPHWKLAPASTLKMLFADTL 106

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              FS  K  +  L     I + +S              + L   L+          AV 
Sbjct: 107 LPKFSKDKVHQVTLKDLDGIGEGSSLVGIKEDLPYSVHDLWLGVFLRSGND------AVH 160

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  S+     + V+ M   +  L  + TH +   G    G  ++A D+ + +     + P
Sbjct: 161 VLSSMNNGVAQTVRDMQARAHELQANDTHVVTPDGYDAKGQVSSAYDLTLFARDGLKN-P 219

Query: 183 QYMHYFQIKGLEI----------------------------KGKKYPNTNW------AVG 208
            +  Y      +                             +     NTN        + 
Sbjct: 220 DFREYCSTAEAQFPGEFAKKKKDKDKKKATDGQAGPEQRPREHFGIQNTNRLLTGTYDLK 279

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--ALDRNTRNKVSASLLSMGFYN 266
            + G  G+K G T  +G    A A +GD+ L+  ++     +     + +A LL  GF  
Sbjct: 280 PYQGIAGVKNGNTTNAGATYTAYAQRGDRKLLVTVMHPDYDESQAVYREAARLLDWGFAA 339

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISE 294
                 +  ++          +    + 
Sbjct: 340 DGKVTPVGELVPPRSVVAERAKASKEAA 367


>gi|318061826|ref|ZP_07980547.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actG]
          Length = 499

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 50/328 (15%)

Query: 10  MAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TA 62
           +A+        + A           + + D  +G ++A   P     PAS  K++   T 
Sbjct: 47  LALPGTQVAPGAGAPKLPKKLTARSWVVADAESGEILAARNPHWKLAPASTLKMLFADTL 106

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              FS  K  +  L     I + +S              + L   L+          AV 
Sbjct: 107 LPKFSKDKVHQVTLKDLDGIGEGSSLVGIKEDLPYSVHDLWLGVFLRSGND------AVH 160

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  S+     + V+ M   +  L  + TH +   G    G  ++A D+ + +     + P
Sbjct: 161 VLSSMNNGVAQTVRDMQARAHELQANDTHVVTPDGYDAKGQVSSAYDLTLFARDGLKN-P 219

Query: 183 QYMHYFQIKGLEI----------------------------KGKKYPNTNW------AVG 208
            +  Y      +                             +     NTN        + 
Sbjct: 220 DFREYCSTAEAQFPGEFAKKKKDKDKKKATDGQAGPEQRPREHFGIQNTNRLLTGTYDLK 279

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--ALDRNTRNKVSASLLSMGFYN 266
            + G  G+K G T  +G    A A +GD+ L+  ++     +     + +A LL  GF  
Sbjct: 280 PYQGIAGVKNGNTTNAGATYTAYAQRGDRKLLVTVMHPDYDESQAVYREAARLLDWGFAA 339

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISE 294
                 +  ++          +    + 
Sbjct: 340 DGKVTPVGELVPPRSVVAERAKASKEAA 367


>gi|257440859|ref|ZP_05616614.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257196699|gb|EEU94983.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 313

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
              P+  LL  ++G V+AE   D    PAS+TK+MTA +      +    +T P  I   
Sbjct: 57  LNSPHAILLRADSGEVLAEKDADSTIYPASMTKMMTALLAIEANPDLDTPVTLPEEIFPA 116

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S + F+ G T T+ + L   ++ S  +   A+A  +  +E+ F   MN  +  L
Sbjct: 117 LQAQNASLAGFQAGETATVRDLLYGAMLPSGAECCEALAREVSGSEEAFAARMNQKAAEL 176

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY----MHYFQIKGLEIKGKKYP 201
           G++ THF N  G+    H +T RDMA L+     +           + +       + + 
Sbjct: 177 GMTGTHFCNPTGLHDPEHVSTVRDMARLTEAALQNETFRKLFTTERYTVPATNCHPQGFT 236

Query: 202 NTNWAVGTFLG-------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
             +  +    G         G KTG+T  +G  + + A    +  I V  GA   ++
Sbjct: 237 MHSTLLSQLDGTELHRGRILGGKTGYTGEAGLCLASLAEVKGREYILVTAGAGGDHS 293


>gi|302519514|ref|ZP_07271856.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
 gi|302428409|gb|EFL00225.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
          Length = 489

 Score =  119 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 100/328 (30%), Gaps = 50/328 (15%)

Query: 10  MAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TA 62
           +A+        + A           + + D  +G ++A   P     PAS  K++   T 
Sbjct: 47  LALPGTQVAPGAGAPKLPKKLTARSWVVADAESGEILAARNPHWKLAPASTLKMLFADTL 106

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
              FS  K  +  L     I + +S              + L   L+          AV 
Sbjct: 107 LPKFSKDKVHQVTLKDLDGIGEGSSLVGIKEDLPYSVHDLWLGVFLRSGND------AVH 160

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  S+     + V+ M   +  L  + TH +   G    G  ++A D+ + +     + P
Sbjct: 161 VLSSMNNGVAQTVRDMQARAHELQANDTHVVTPDGYDAKGQVSSAYDLTLFARDGLKN-P 219

Query: 183 QYMHYFQIKGLEI----------------------------KGKKYPNTNW------AVG 208
            +  Y      +                             +     NTN        + 
Sbjct: 220 DFREYCSTAEAQFPGEFAKKKKDKNKKKATDGQAGPEQRPREHFGIQNTNRLLTGTYDLK 279

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG--ALDRNTRNKVSASLLSMGFYN 266
            + G  G+K G T  +G    A A +GD+ L+  ++     +     + +A LL  GF  
Sbjct: 280 PYQGIAGVKNGNTTNAGATYTAYAQRGDRKLLVTVMHPDYDESQAVYREAARLLDWGFAA 339

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISE 294
                 +  ++          +    + 
Sbjct: 340 DGKVTPVGELVPPRSVVAERAKASKEAA 367


>gi|89901123|ref|YP_523594.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhodoferax ferrireducens
           T118]
 gi|89345860|gb|ABD70063.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Rhodoferax ferrireducens T118]
          Length = 346

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 95/248 (38%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S     K     ++D  T  V+           ASLTKLMT  V+              
Sbjct: 78  ASDTLDLKSSVALVIDQETNEVLFSKNEQAVLPIASLTKLMTGLVLQEA----HLPTDQM 133

Query: 80  ITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ITIS++  +    S S  K G+T+     L L ++ S N  A A+A S       FV  M
Sbjct: 134 ITISQDDVDTEKGSTSRLKVGTTLNRGELLHLALMSSENRAAHALARSYPGGLPVFVGLM 193

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE---I 195
           N  ++ +G++ TH++   G+      ++ARD+A L      D                  
Sbjct: 194 NAKAQLIGMTDTHYVEPTGLSSKNQ-SSARDLAKLVNVAHGDPILRELTTSPDYQVAVGN 252

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +  +Y NTN  V       G  KTG+   +G  +V       + LI V L +  + TR  
Sbjct: 253 RTLQYNNTNRLVKNPSWDIGLQKTGYISEAGRCLVMQTKIAGRKLIMVFLDSAGKLTRIA 312

Query: 255 VSASLLSM 262
            +  +   
Sbjct: 313 DAERVRRW 320


>gi|93005508|ref|YP_579945.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Psychrobacter
           cryohalolentis K5]
 gi|92393186|gb|ABE74461.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Psychrobacter cryohalolentis K5]
          Length = 364

 Score =  119 bits (297), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 19/252 (7%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF--LKEKKAMLTTP 79
           I  +       ++D  TG  I +   D     AS+TK+MTA VV        ++  L   
Sbjct: 112 IPISTDSRSVAVIDAETGESIYQKDADIARPMASITKVMTAIVVLDAGLDMREELTLDPE 171

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             +         ++S  K G  +     L + ++KS N  A ++A +       F++ MN
Sbjct: 172 DFVGPKR-----ASSNLKSGDRLNRAEMLLMALMKSENPAAKSLARNYPGGYSAFIRAMN 226

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ LG+S   F +  G+    +  ++ D+  +      ++     +   K  +     
Sbjct: 227 RKAQELGMSTAFFGDPTGL-DKRNVASSNDLVKMVR-AAGNYDVIRRFSTTKSYDFFVSN 284

Query: 200 YPNTNWAVGTFLG----------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           + + N                      KTGF   +G  +V      ++  I VILGA   
Sbjct: 285 FSSGNRTYKANNTSSLVRDGSYPIGISKTGFINEAGRCVVMETRVNNRPAIIVILGANSS 344

Query: 250 NTRNKVSASLLS 261
            TR   + ++L+
Sbjct: 345 ATRWGDAKNILN 356


>gi|229199155|ref|ZP_04325838.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
 gi|228584426|gb|EEK42561.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1293]
          Length = 273

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 9   FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 124 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 183

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +       +  K  N           A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 271


>gi|218508407|ref|ZP_03506285.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli Brasil
           5]
          Length = 312

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 97/246 (39%), Positives = 148/246 (60%), Gaps = 2/246 (0%)

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            +  L TPI +SK A+  P +   FK G  +TLD+ALK+L+VKSANDIAVA+AE++  T+
Sbjct: 2   GQISLDTPIVMSKRAAAQPAAKMYFKPGQKLTLDSALKILMVKSANDIAVAVAEAVGGTQ 61

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++ DFPQY  YF ++
Sbjct: 62  EGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRDFPQYAGYFSLE 121

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           G     +  PN N  +G F GADGMKTGF CASGFN + SA +  ++L++V+LG      
Sbjct: 122 GFTTGQQNVPNLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRTLVSVVLGTDSLAA 181

Query: 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           R   +A+LL  G   +         +K + Q     +V +I+ ++C+ +   I   T+ +
Sbjct: 182 RADATANLLQKGLTTQFPGNDTLGSLKPYGQGQD--QVTDITADICSAKGAKIRSETRDE 239

Query: 312 EAKDKE 317
             + K 
Sbjct: 240 VGRMKV 245


>gi|70731349|ref|YP_261090.1| D-alanyl-D-alanine endopeptidase [Pseudomonas fluorescens Pf-5]
 gi|68345648|gb|AAY93254.1| D-alanyl-D-alanine-endopeptidase [Pseudomonas fluorescens Pf-5]
          Length = 312

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 107/282 (37%), Gaps = 24/282 (8%)

Query: 1   MRQFLVIIAMAML--------------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENY 46
           M+  L I+++                 +   P  +           LLD  T  VI  + 
Sbjct: 1   MKIRLSILSLLFAVSGTLIAHSVDASETTAAPRDTSQLHIASGSALLLDLQTNKVIYSSN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLD 105
           PD     AS+TKLMTA VV          L   I+++  +  E     S  K  S ++  
Sbjct: 61  PDVIVPIASVTKLMTAMVVLDAK----LPLDEYISMNISDTPEMKGVFSRVKLNSELSRR 116

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L + ++ S N  A ++A         F+  MN  +K+LG++ T ++   G+  H   T
Sbjct: 117 DTLLIALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKSLGMTHTRYVEPTGLSIHNVST 176

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGF 220
                 +L    K      +   + K +  +   Y     NT+  V          KTGF
Sbjct: 177 ARDLSKLLVASRKYPLLSELSTTKEKTVAFRKPNYTLGFRNTDHLVNKEKWDIKITKTGF 236

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           T  +G  +V     G++ +  VIL A  + T    ++ + + 
Sbjct: 237 TNQAGHCLVLVTSMGNRPVALVILDAFGKYTHFADASRIRNW 278


>gi|153813456|ref|ZP_01966124.1| hypothetical protein RUMOBE_03876 [Ruminococcus obeum ATCC 29174]
 gi|149830477|gb|EDM85569.1| hypothetical protein RUMOBE_03876 [Ruminococcus obeum ATCC 29174]
          Length = 334

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 12/248 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
              PY  L++  +G VI +   +    PAS+TK+MT  +    LK+    +T    +  +
Sbjct: 75  INSPYAVLMNAKSGKVIGDINGEEQMYPASMTKIMTTILAIENLKDLNQEITITNDMVAD 134

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   + F+   T+   + L  +++ S  +  VA+A+++  +   FV  MN  ++ L
Sbjct: 135 LYVQDAMQAGFQPNETVKAIDLLYGVMLPSGAECCVALADTVAGSVSDFVTLMNEKAEKL 194

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG-----------LE 194
           G++ THF +  G+ +  HY+TA+D+A+L      +                       + 
Sbjct: 195 GMTGTHFSSISGLHREDHYSTAKDIALLLRYAIKNDTFREIIESPYHSTSGTNIHPDGIT 254

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-DRNTRN 253
                + N +          G KTG+T  +G  + + A       I V  GA    N   
Sbjct: 255 FYSTMFKNLSDTSVIDGEIKGGKTGYTSQAGHCLASFAEIDGVEYILVTAGAPGTGNPHI 314

Query: 254 KVSASLLS 261
             +  L +
Sbjct: 315 DDAVKLYN 322


>gi|3043860|gb|AAC14599.1| extracellular protein Exp2 precursor [Lactococcus lactis subsp.
           cremoris MG1363]
          Length = 284

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 37/281 (13%)

Query: 1   MRQFLVIIAMA---------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DHP 50
           M++  +I                +     +   T        +D ++G ++      D  
Sbjct: 1   MKKIAIIFCTLLMSLSVLSSFAVSADTTTTNNFTVAAKSAIAIDASSGKILYAQNADDAS 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDN 106
              AS+TKL+TAY+V+  + E K   TT + IS  A         SN    +    T+ +
Sbjct: 61  TRIASITKLLTAYLVYKNVAENKLTWTTKVPISDYAYELTQNSNASNIPLAQNGQYTVKD 120

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG---- 162
            L  L++ SAN  A+A+AE +  +E KFV  M    K+ G++ +H +NA G+        
Sbjct: 121 LLNALLLPSANSAAIALAEKIAGSEPKFVDMMTKQMKDWGITDSHLVNASGLPNDDLNGH 180

Query: 163 ----------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAV 207
                     +  +A+ +A LS+ +  DFP+ +   +   +             NTN  +
Sbjct: 181 IYPGSGASATNTMSAKAVATLSYHLIQDFPEVLQITKKTEIPFDTGNEEKMTLTNTNQML 240

Query: 208 GTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             F     G DG+KTG T         +  Q    +I V+L
Sbjct: 241 SGFSTSRTGVDGLKTGSTSFQIDCFAGTTNQNGFRIITVVL 281


>gi|315445088|ref|YP_004077967.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium sp. Spyr1]
 gi|315263391|gb|ADU00133.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium sp. Spyr1]
          Length = 297

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 14/256 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + L D +TG V+A    +  + PAS  K++ A VV          L 
Sbjct: 38  AGSVPVPDGPAQAWVLADMDTGAVLAARQENGRFAPASTIKILLAMVVLDE-----LPLD 92

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +  ++  +    + +    G+T T    L+ L++ S ND A  +A ++       V  
Sbjct: 93  ATVVANEADTRVECNCAGVAPGTTYTTRQLLEGLLLVSGNDAANTLA-TMLGGRDAAVAK 151

Query: 138 MNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK---G 192
           MN  +  LG   T   +  G+       ++T RD+A+L               Q      
Sbjct: 152 MNAKAAGLGAHGTRAGSPSGIDGPGIDIWSTPRDLAVLFRAAMAYPVFAQITAQPTAVFP 211

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDR 249
            +       N +  +  + G  G KTG+T  +    VA A +  + L+  ++        
Sbjct: 212 TKSGDVVLVNQDEMLHRYPGTFGGKTGYTDLARKTFVAGASRNGRHLVVAMMYGLVTEGG 271

Query: 250 NTRNKVSASLLSMGFY 265
            T    +++LL  GF 
Sbjct: 272 PTYWDQASALLDWGFA 287


>gi|319762474|ref|YP_004126411.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Alicycliphilus
           denitrificans BC]
 gi|330825675|ref|YP_004388978.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Alicycliphilus
           denitrificans K601]
 gi|317117035|gb|ADU99523.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Alicycliphilus
           denitrificans BC]
 gi|329311047|gb|AEB85462.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Alicycliphilus
           denitrificans K601]
          Length = 364

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +S     K     ++D +T  V+           ASLTKLMT  ++       +  +  P
Sbjct: 101 VSDPLDLKSSVALVIDQDTKEVLLSKNDHAVLPIASLTKLMTGLLISEA----RLPMDEP 156

Query: 80  ITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ITI+++  +    S S    G+T++    L L ++ S N  A A+  +       FVQ M
Sbjct: 157 ITITQDDVDTEKGSGSRLTVGTTLSRGELLHLALMSSENRAAHALGRTYPGGLAVFVQRM 216

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE---I 195
           N  ++ LG++ T ++   G+      ++A D+A L      D                  
Sbjct: 217 NAKARLLGMTETRYVEPTGLSSKNQ-SSAHDLATLVNVAHGDPLLRELSTSPSHEVAVGQ 275

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +  +Y NTN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R  
Sbjct: 276 RVLQYNNTNRLVKSPSWDIGLQKTGYISEAGRCLVMQAQVAGRKLIMVFLDSAGKFSRLG 335

Query: 255 VSASLLSM 262
            +  + S 
Sbjct: 336 DAERVRSW 343


>gi|145224758|ref|YP_001135436.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium gilvum
           PYR-GCK]
 gi|145217244|gb|ABP46648.1| Serine-type D-Ala-D-Ala carboxypeptidase [Mycobacterium gilvum
           PYR-GCK]
          Length = 313

 Score =  118 bits (296), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 14/256 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + L D +TG V+A    +  + PAS  K++ A VV          L 
Sbjct: 54  AGSVPVPDGPAQAWVLADMDTGAVLAARQENGRFAPASTIKILLAMVVLDE-----LPLD 108

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
             +  ++  +    + +    G+T T    L+ L++ S ND A  +A ++       V  
Sbjct: 109 ATVVANEADTRVECNCAGVAPGTTYTTRQLLEGLLLVSGNDAANTLA-TMLGGRDAAVAK 167

Query: 138 MNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK---G 192
           MN  +  LG   T   +  G+       ++T RD+A+L               Q      
Sbjct: 168 MNAKAAGLGAHGTRAGSPSGIDGPGIDIWSTPRDLAVLFRAAMAYPVFAQITAQPTAVFP 227

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDR 249
            +       N +  +  + G  G KTG+T  +    VA A +  + L+  ++        
Sbjct: 228 TKSGDVVLVNQDEMLHRYPGTFGGKTGYTDLARKTFVAGASRNGRHLVVAMMYGLVTEGG 287

Query: 250 NTRNKVSASLLSMGFY 265
            T    +++LL  GF 
Sbjct: 288 PTYWDQASALLDWGFA 303


>gi|167772343|ref|ZP_02444396.1| hypothetical protein ANACOL_03720 [Anaerotruncus colihominis DSM
           17241]
 gi|167665446|gb|EDS09576.1| hypothetical protein ANACOL_03720 [Anaerotruncus colihominis DSM
           17241]
          Length = 516

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 124/366 (33%), Gaps = 50/366 (13%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF-LKEK 72
           S         +  +     +L+ ++G  + E       +PASLTK+MTA V        K
Sbjct: 65  SASLYTPPDEDLLQSRGIFMLNIDSGERVYERNSQDKIHPASLTKIMTAIVALESGHDLK 124

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTE 131
                  + I               +G    L + L  ++++S N+ ++ IA+ +   + 
Sbjct: 125 AETTDLKVYIQNYIYNQQAGGGGIYQGDQYVLYDLLNAMLIQSVNEASMMIADYIGNGSI 184

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTD--------- 180
           + FV  MN  +K +G   THF N  G+       YTTA DMA+++     +         
Sbjct: 185 EDFVAMMNQKAKEIGAMNTHFGNPSGLYVESEESYTTAYDMALIAQYAMQNNDFAEIVSR 244

Query: 181 -----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG-FNIVASAIQ 234
                 P   +   I          PN  W    + G  G+KTG        N V++A +
Sbjct: 245 TAYTSQPTTRYPEGITWTTTNKMMIPNQ-WEGYYYEGIKGIKTGSLPDQDVINFVSTATR 303

Query: 235 GDQSLIAVILGAL----------DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
              + + V LGA             N   K +  L +  F   + +  +    K      
Sbjct: 304 DGYTYLLVCLGAPYRSPDTQEIYQYNLAFKDTERLYNWAFDTFSVKTLMKRGTKVAGVNV 363

Query: 285 LSN-----------------EVPNISEEVCTTQKEIINYNTQM---KEAKDKESHFIDFE 324
             +                    N +E+    + EI N   +    ++ K ++      E
Sbjct: 364 RMSWDEDYVDLLADESFARLVPKNATEDDIEPRVEIYNAVEKPIRGQKGKTEQFIDAPIE 423

Query: 325 KITLLK 330
           K   + 
Sbjct: 424 KGQEVG 429


>gi|116874163|ref|YP_850944.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116743041|emb|CAK22165.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 273

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 6/245 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +   N    I+E   D     AS+TKLMT ++V   +K+ +      + + +
Sbjct: 28  NVSADAAAVYSMNDKKAISEKNSDKVMPIASITKLMTTFLVLEAVKKGELSWDEKLDLIR 87

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S     K  T ++ +    ++V SAND A  +          F + MN  +K 
Sbjct: 88  LDDPSAVSLYAITKKRTWSVRDLYSAMLVMSANDAAETLG--NRLDGADFPKKMNKEAKK 145

Query: 145 LGLSA-THFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQI-KGLEIKGKKY 200
           LGLS  T F++A G+        +T +D+  LS  + + +P+ +        +  KG K 
Sbjct: 146 LGLSNKTEFVSASGLDVDGERSVSTTKDLYKLSSELISTYPEVLDTTSKSSIITEKGAKI 205

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            +TN  +GT  G DG+KTGFT  +G+  + +A Q  + +I+++L +     R K +  L+
Sbjct: 206 ESTNDLIGTIPGLDGLKTGFTDEAGYCFIGTAKQNGKRVISIVLNSDTAENRFKDTEKLI 265

Query: 261 SMGFY 265
            +GF 
Sbjct: 266 KLGFK 270


>gi|312796721|ref|YP_004029643.1| D-alanyl-D-alanine-endopeptidase [Burkholderia rhizoxinica HKI 454]
 gi|312168496|emb|CBW75499.1| D-alanyl-D-alanine-endopeptidase (EC 3.4.99.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 401

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 8/235 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D +TG V+ +         AS+TKLMTA VV          LT      ++      
Sbjct: 152 FMVDQHTGEVLYDKNSASVVPIASITKLMTAMVVLDSKAPLNERLTVTD---EDRDYEKG 208

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           + S    GST++ ++ L + ++ S N  A A++         F+  MN  +  LG++ TH
Sbjct: 209 TGSRLSIGSTLSREDMLHIALMASENRAAAALSRYYPGGRPGFIVAMNRKAAELGMAQTH 268

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK---YPNTNWAVG 208
           F NA G+    + ++ARD+  +                       GK+   Y +TN  V 
Sbjct: 269 FQNATGLTS-QNVSSARDLVKMVNAAYQYPLIRQFSTDRSYDVFTGKRTLAYNSTNALVR 327

Query: 209 TFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                 G  KTGF   +G  +V  A    + +I V+L +  + +R   +  L + 
Sbjct: 328 NASWDIGLQKTGFINEAGECLVMQATIHGRPVIMVLLDSFGKYSRFADAQRLRNW 382


>gi|196047530|ref|ZP_03114740.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
 gi|196021644|gb|EDX60341.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB108]
          Length = 279

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|30265054|ref|NP_847431.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Ames]
 gi|47530558|ref|YP_021907.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|47567050|ref|ZP_00237767.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
 gi|49187867|ref|YP_031120.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|52140522|ref|YP_086306.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus cereus E33L]
 gi|65317000|ref|ZP_00389959.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
 gi|118480099|ref|YP_897250.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|165870851|ref|ZP_02215503.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|167634882|ref|ZP_02393200.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|167639927|ref|ZP_02398195.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0193]
 gi|170685975|ref|ZP_02877198.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|170706954|ref|ZP_02897411.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|177652350|ref|ZP_02934853.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0174]
 gi|190567200|ref|ZP_03020115.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|196032895|ref|ZP_03100308.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|196040599|ref|ZP_03107899.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
 gi|218906208|ref|YP_002454042.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|227817784|ref|YP_002817793.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CDC 684]
 gi|228917642|ref|ZP_04081184.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930039|ref|ZP_04093049.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228948739|ref|ZP_04111017.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229124549|ref|ZP_04253734.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|229601870|ref|YP_002869251.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
 gi|254687345|ref|ZP_05151202.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254725358|ref|ZP_05187141.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A1055]
 gi|254735318|ref|ZP_05193026.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740584|ref|ZP_05198275.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254753154|ref|ZP_05205190.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Vollum]
 gi|254761497|ref|ZP_05213518.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Australia 94]
 gi|30259731|gb|AAP28917.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           Ames]
 gi|47505706|gb|AAT34382.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|47556368|gb|EAL14702.1| D-alanyl-D-alanine carboxypeptidase, putative [Bacillus cereus
           G9241]
 gi|49181794|gb|AAT57170.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|51973991|gb|AAU15541.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus cereus E33L]
 gi|118419324|gb|ABK87743.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis str. Al
           Hakam]
 gi|164713360|gb|EDR18885.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|167512008|gb|EDR87386.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0193]
 gi|167529632|gb|EDR92381.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|170128057|gb|EDS96927.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|170670439|gb|EDT21179.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|172082356|gb|EDT67422.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0174]
 gi|190561704|gb|EDV15674.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|195994324|gb|EDX58279.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           W]
 gi|196028731|gb|EDX67338.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus
           NVH0597-99]
 gi|218535970|gb|ACK88368.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH820]
 gi|227003439|gb|ACP13182.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           CDC 684]
 gi|228658889|gb|EEL14544.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 95/8201]
 gi|228811046|gb|EEM57389.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228829538|gb|EEM75165.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842019|gb|EEM87124.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229266278|gb|ACQ47915.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
          Length = 279

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|301056499|ref|YP_003794710.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis CI]
 gi|300378668|gb|ADK07572.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 279

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RIINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|70727253|ref|YP_254169.1| penicillin binding protein 4 [Staphylococcus haemolyticus JCSC1435]
 gi|68447979|dbj|BAE05563.1| penicillin binding protein 4 [Staphylococcus haemolyticus JCSC1435]
          Length = 430

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 75/363 (20%), Positives = 142/363 (39%), Gaps = 53/363 (14%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIA------ETNKLPYYT---LLDT----------NTGH 40
           M++  ++  A+ +   I    S A       T     Y    + D            TG 
Sbjct: 1   MKRSLIITFALLLTIVIIAPNSYASEYEPTPTEIARQYGYPNVTDAYQPEGSINVSQTGQ 60

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTF 96
           ++ +   +  W PAS+TKLMT Y+    + + +  L   + I+            SN+  
Sbjct: 61  ILYDYQSNQKWYPASMTKLMTMYLTLEAVNKGELSLNDKVHITDKHYRMSTLPELSNTKL 120

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
             G T T+   L++ +  S+N  A+ +A+ +      F   MN  +K LG+S THF+N  
Sbjct: 121 YAGETYTISELLQITVSNSSNAAALILADEVSGNVNDFTDLMNKKAKALGMSNTHFVNPT 180

Query: 157 GVVQ--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           G                     +TA+D AIL   +  + P+ +H+ +       G  Y  
Sbjct: 181 GAENKQLKEFAPSKYKNQDNTTSTAKDFAILDHHVIKETPKILHFTKQLAPTQHGVTYYT 240

Query: 203 TNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNTR 252
            N +      + LG DG+KTG +  + +N   +  + +  +  VI+GA D         R
Sbjct: 241 FNHSLEGAKMSLLGTDGLKTGSSDVADYNHTITTKRNNFRINQVIMGAGDYVNLGGEKQR 300

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           N +  ++++  F   + +K ++          ++ +   + + +     + +N       
Sbjct: 301 NMMGNAMMNRSFDQYSYKKVLSKGTH-----KINGKKYYVKDNLYDVVPKGMNKKDYKFI 355

Query: 313 AKD 315
            KD
Sbjct: 356 VKD 358


>gi|313683330|ref|YP_004061068.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Sulfuricurvum
           kujiense DSM 16994]
 gi|313156190|gb|ADR34868.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sulfuricurvum
           kujiense DSM 16994]
          Length = 275

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 15/272 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---KLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M + L+   + +          +E      +    + +     ++          PASLT
Sbjct: 1   MLKSLIFFFLLLCITSLHAEIDSEKLDKLNVEALLVKNLKNNEILYSKEALREVKPASLT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA +     +     LT  + ISK   +  P+ + +K+G    L + +   ++KS N
Sbjct: 61  KIMTATLAIEQGE-----LTRLVVISKEMLQVEPTKAGYKEGEIFLLGDLINAAMIKSDN 115

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           D A+A+A ++  + + F + MN  + ++G+  T F N  G     H++T +D+  L+   
Sbjct: 116 DAAMAVAIAIGGSIENFNKMMNAKAASIGMVNTVFTNPCGFDIGNHHSTPQDLLTLAEYA 175

Query: 178 K-----TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
                  D  +   +        +       N  +  +  A G+KTG+T  +G  ++A A
Sbjct: 176 IKNPVFNDITRLNQHTYYSLNTARKFVANTHNQLLNKYEYAVGVKTGYTSKAGPCLIARA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
            + D+  + V+L    +  R K +  +    F
Sbjct: 236 KKEDRDCLIVMLN--SKENRWKTAKEIFEQVF 265


>gi|260907390|ref|ZP_05915712.1| Serine-type D-Ala-D-Ala carboxypeptidase [Brevibacterium linens
           BL2]
          Length = 408

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 63/284 (22%), Positives = 107/284 (37%), Gaps = 21/284 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +         + + D ++G +      +    PAS  KL+TA  +     +KK  +T   
Sbjct: 63  AKPPKPTGTSWLVGDLDSGELHVAKNVEKRHAPASTIKLLTALALVDEFDDKKKKVTAEF 122

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                  E   +     + +  ++D     +++ SAND A A+  +    +K     MN 
Sbjct: 123 ----EDMEVDGTKVGLMQTNKYSIDLLFHAMLMSSANDAANALGRAAGGQDKAV-DLMNE 177

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL------- 193
            +  LG+S T   N  G+   G YTTA D+  L+W +  D                    
Sbjct: 178 KAAELGMSNTQAKNTSGLDAKGQYTTAEDLMKLAWAVCEDDYLMKVIGTETYQFPGGTNP 237

Query: 194 ----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
               + KG +  N     G   G  G+K GFT A+  + VA A +    ++A +LG  + 
Sbjct: 238 ETKEKFKGYEIQNHTKIAGQVDGGLGLKNGFTRAAKGSYVAVAERDGHRVVATMLGIDN- 296

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           N+R + +  LL   F     +            Q  +  VP  +
Sbjct: 297 NSR-QAAVDLLEWDFAQTDPKSL---QTVPVGVQATAEAVPTAT 336


>gi|254821197|ref|ZP_05226198.1| DacB [Mycobacterium intracellulare ATCC 13950]
          Length = 295

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 14/251 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+A    +    PAS  K + A VV          L + +   
Sbjct: 42  PDGPAQTWIIADLDSGQVLAGRDQNVAHPPASTIKTLLAQVVLD-----SVSLDSTVVAD 96

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              ++   +    K G T T    L  L++ S ND A  +A  +       V  MN  + 
Sbjct: 97  VADTQVECNCVGIKPGRTYTARQLLDGLLLVSGNDAANTLA-HMLGGPDVTVAKMNAKAA 155

Query: 144 NLGLSATHFMNAHGVVQHG--HYTTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
           +LG + TH     G+   G    +TA D+A++      +            +   +   +
Sbjct: 156 SLGATNTHAATPSGLDGPGGSGSSTAHDLAVIFRAAMANPVFAQITAEPSAMFPGDNGDR 215

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTGFT A+    V +A +G + L+  ++         +    
Sbjct: 216 LITNQDELLQRYPGAIGGKTGFTNAARKTFVGAAARGGRRLVIAMMYGLVKEGGPSYWDQ 275

Query: 256 SASLLSMGFYN 266
           +A+L   GF  
Sbjct: 276 AATLFDWGFAQ 286


>gi|326789965|ref|YP_004307786.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
 gi|326540729|gb|ADZ82588.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium lentocellum
           DSM 5427]
          Length = 450

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 101/277 (36%), Gaps = 13/277 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +++L  +   ++ +   F S           L++  T  +I        + PAS TK++T
Sbjct: 3   KKYLSFLLCFIIFSNSLFASALPDISADGAILIEPKTNTIIYSKNMYQTFYPASTTKILT 62

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A  V   L     +  T    + +      S    K G   T+ + L  +++ S N +  
Sbjct: 63  ALAVLQDLPTDMII--TKTQTAADEVPADSSQIGLKVGDQYTVLDGLYAVLMASDNYVCY 120

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +A +       F + MN  + +     +HF+N HG     HYTT  D++ ++     D 
Sbjct: 121 DLALADKGNISTFAKRMNGLAIDSNALFSHFINPHGYHDPDHYTTPYDLSQIAKAAFDDP 180

Query: 182 PQYM------HYFQIKGLEIKGKKYPN----TNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                     + F++   ++              +          KTG+   +G  +VA 
Sbjct: 181 ILTKIAGTSSYNFKVANSDVVIPLTHTSALLDKNSPYYNSHVVASKTGYHTPAGRTLVAK 240

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
           A+  +  LI V++     N   +    L   G  N T
Sbjct: 241 AVYDNIELIGVVMRTDAPNQ-FEDMNKLFEYGASNFT 276


>gi|291452581|ref|ZP_06591971.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces albus J1074]
 gi|291355530|gb|EFE82432.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces albus J1074]
          Length = 292

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/276 (23%), Positives = 110/276 (39%), Gaps = 19/276 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D ++G  +     D     AS TK M   VV            T     +
Sbjct: 20  KVSAKGAFLMDASSGKTVFSKSADTKRQMASTTKTMAVAVVLDTKGVNLDKKVTVKQTYR 79

Query: 85  NASEYPPSNS-TFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------CKTEKKFVQH 137
           +      +++   + G  +T+   L   ++ S  D A A+A++           K F+  
Sbjct: 80  DYVAKNGASTADLRTGDKLTVRQLLYGTMLPSGCDAAYALADTFGSGSTVSARTKSFISK 139

Query: 138 MNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYM--------HYF 188
           MN  +K+LG++ T F +  G+     +Y+T RD+A L+     +                
Sbjct: 140 MNAKAKSLGMTNTKFDSFDGISKAGNNYSTPRDLAKLARHAMKNSTFKTVVKAASTKQKA 199

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             KG   +   + NTN  +G++ GA G KTG   A+G  ++ SA +  +SL+ VIL    
Sbjct: 200 TAKGGGTRTYTWYNTNKLLGSYKGATGAKTGTGTAAGPCLIFSATKNGKSLVGVILN--- 256

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
            + R   +  +L  GF  KT        +    QQ+
Sbjct: 257 DSNRYADAGKMLDYGFGKKTTSTLKVKPLPQGAQQD 292


>gi|325277519|ref|ZP_08143117.1| D-alanyl-D-alanine endopeptidase [Pseudomonas sp. TJI-51]
 gi|324097346|gb|EGB95594.1| D-alanyl-D-alanine endopeptidase [Pseudomonas sp. TJI-51]
          Length = 312

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 91/242 (37%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D NT   +  N+ D     AS+TKLMTA VV         MLT  I  +  
Sbjct: 45  LASGSALLIDLNTNQELYSNHADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPE 104

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  + GS +     L + ++ S N  A ++A +       F++ MN  +++L
Sbjct: 105 ---MKGVYSRVRPGSQLNRRETLLITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSL 161

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G++ T ++   G+      T      +L    K      +   + K +  +   Y     
Sbjct: 162 GMAHTRYVEPTGLSTQNVSTARDLSKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFR 221

Query: 202 -NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              +    +       KTGFT  +G  +V      ++ +  VIL A  + T    ++ L 
Sbjct: 222 NTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRLR 281

Query: 261 SM 262
             
Sbjct: 282 QW 283


>gi|89898744|ref|YP_515854.1| penicillin-binding protein 5 [Chlamydophila felis Fe/C-56]
 gi|89332116|dbj|BAE81709.1| penicillin-binding protein 5 [Chlamydophila felis Fe/C-56]
          Length = 433

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/341 (16%), Positives = 118/341 (34%), Gaps = 40/341 (11%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEKKAMLTT 78
              +     ++  ++G ++     D    PAS+TK+ TA  +         +        
Sbjct: 29  PETRGNAAAVIHADSGKILYAKDIDKKIYPASMTKIATALFILKKHPEVLNRFITVKQDA 88

Query: 79  PITISKNASEYPPSNSTFKK------------GSTMTLDNALKLLIVKSANDIAVAIAES 126
             +I+  A +     S                   ++  +    L++ SAND A  +A +
Sbjct: 89  IASITPQAKKQSGYRSPPHWLETDGVTIQLQNKEEVSGWDLFHALLICSANDAANTLATA 148

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF----- 181
             ++  +F++ +N   + LG   THF N HG+    HYTTARD+  +      +      
Sbjct: 149 CSESVAEFMKQLNTFLRELGCEHTHFNNPHGLHHPNHYTTARDLTRIMRECLKEPLFRQV 208

Query: 182 --PQYMHYFQIKGLEIKGKKYPNT---NWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
                         + +     N      +   +  A G KTG T  +G N++ +A +  
Sbjct: 209 IRTTNYKMAPTNLSQERVLNLTNKLILPGSTYYYPPALGGKTGTTKDAGKNLIFAAKKHG 268

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
           +S+I +  G        +   +L    F     R+ +    + +  +        +  +V
Sbjct: 269 RSIITIAAGYPAMGELYEDVIALCEGVFNEPLLRRYLIPPTEKYTLR------LGLLGKV 322

Query: 297 CTTQKEIINYNTQMKEAKDKESH-------FIDFEKITLLK 330
                + + Y+    E ++ ++             +  LL 
Sbjct: 323 SIPLPQGVYYDFYASEEEEHQTISFVPHATKFPIHRGDLLG 363


>gi|330467947|ref|YP_004405690.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Verrucosispora
           maris AB-18-032]
 gi|328810918|gb|AEB45090.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Verrucosispora
           maris AB-18-032]
          Length = 420

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 88/250 (35%), Gaps = 15/250 (6%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAMLTTPITIS 83
               + + D +TG V+    P     PAS+ KL+   T        +           I 
Sbjct: 89  TATSWVVADLDTGEVLGGCGPHEYATPASVQKLLLAATMLPRLDPAEVVTITAGDLD-IE 147

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             +S          +  T+ L   L+     +     +             ++ MN  ++
Sbjct: 148 PGSSAVGLVAGGRYRIETLWLGLLLRSGNEVANALARLG---GGADGMAGGLRAMNEQAR 204

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-------HYFQIKGLEIK 196
            LG   TH     G+   G +T+A D+A+++     D                      K
Sbjct: 205 QLGAYQTHAATPSGLDGPGQFTSAYDLALIARACFDDEHFRRYVATREADIPAQPKQRAK 264

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKV 255
           G    N N  +  + GA G KTG+T  +    V +A +  + L+  +LGA   + R  + 
Sbjct: 265 GFTIDNDNQLLYRYPGALGGKTGYTDLARHTYVGAAERNGRRLVVTLLGADVIDQRGWQQ 324

Query: 256 SASLLSMGFY 265
            A+LL  GF 
Sbjct: 325 GAALLDWGFA 334


>gi|118471560|ref|YP_886772.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172847|gb|ABK73743.1| D-alanyl-D-alanine carboxypeptidase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 275

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 88/242 (36%), Gaps = 11/242 (4%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               + + D +TG V+A   P   + PAS  K + A VV                 + + 
Sbjct: 43  PAKAWLVADMDTGRVLASKDPYGSYAPASTIKPLLAMVVLDH-----LRPDNFARANASH 97

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           ++   S    K G   T    L  L++ S ND A  +A+ L          MN  +  +G
Sbjct: 98  TKVECSCVGLKPGQPYTTRQLLDALLMVSGNDAANMLADMLGGPRVAV-AAMNRKAAAVG 156

Query: 147 LSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
              T   +  G+        TT  D+A++      ++P      +    +  GK     N
Sbjct: 157 ARNTRAASPSGLDGPGWESLTTPHDLAVIFRAAL-NYPVIAQILRQTTAQFPGKTLTYQN 215

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +  + G  G KTG+T  +    V +A +G++ L+ V +           +  L   GF
Sbjct: 216 ELLTRYPGDIGGKTGYTNLARKTYVGAAQRGNRRLVVVQMYGTG--DLYDQAIRLFDYGF 273

Query: 265 YN 266
             
Sbjct: 274 SQ 275


>gi|300119675|ref|ZP_07057217.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           SJ1]
 gi|298722970|gb|EFI63870.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           SJ1]
          Length = 279

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|225866993|ref|YP_002752371.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           03BB102]
 gi|225787746|gb|ACO27963.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus 03BB102]
          Length = 279

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 106/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++              IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLEN-----VTEDEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|269128396|ref|YP_003301766.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermomonospora curvata
           DSM 43183]
 gi|268313354|gb|ACY99728.1| Serine-type D-Ala-D-Ala carboxypeptidase [Thermomonospora curvata
           DSM 43183]
          Length = 447

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 101/293 (34%), Gaps = 33/293 (11%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++ ++ P            Y + D  TG V+A   P   + PAS  K++TA  +      
Sbjct: 64  IVVDVGPGAKAPPKIAAGAYIVADAGTGQVLAAKNPHGRFLPASALKMLTAVALIPK--- 120

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
                   +  ++   E   S        T  + +    L++ S ND A+A+A++     
Sbjct: 121 --LDPNATVRPTRETCEVEGSKVGMTPKLTYKVSDLFHALLMVSGNDAALALAQAAGGVR 178

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQH------GHYTTARDMAILSWR--------- 176
                 MN  ++ L  + T   + +G+           +T+  D+A++  +         
Sbjct: 179 AAL-DSMNAEARRLQANDTLAGSTNGLDVDLGLTVKTQHTSVYDLALIMRQGLKMPQLRA 237

Query: 177 IKTDFPQYMHYFQIKGL-----EIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFN 227
                  Y      K       +I G    +           + GA G K GFT A+G  
Sbjct: 238 YIGKNHHYWPAPPTKEQRKKGKKIGGYPIYSHIRLLPGQRYEYPGAIGGKNGFTMAAGQT 297

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
            V +A +  ++LI  +L              LL  GF      + +  +++  
Sbjct: 298 FVGAAERNGRTLIVALLRG---ENLWPDVTKLLDWGFAYGPRVRPVGVLVEPV 347


>gi|229072497|ref|ZP_04205699.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|228710473|gb|EEL62446.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
          Length = 273

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 9   FTGMIFFSYAQRQQSVRADQPNITGQYGVTIDADTGEILYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 124 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 183

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 271


>gi|120611767|ref|YP_971445.1| murein-DD-endopeptidase [Acidovorax citrulli AAC00-1]
 gi|120590231|gb|ABM33671.1| murein-DD-endopeptidase [Acidovorax citrulli AAC00-1]
          Length = 371

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 97/248 (39%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            ++     K     ++D +T  V+           ASLTKLMT  ++          +  
Sbjct: 103 SVTDPLDLKSSVALVIDQDTQEVLLSKNDHAVLPIASLTKLMTGLLISEAK----LPMDE 158

Query: 79  PITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           PITI+++  +    +S+     +T+T    L L ++ S N  A A+  +     + FV  
Sbjct: 159 PITITQDDVDTEKFSSSRLAVGTTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVAR 218

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  ++ +G++ T ++   G+  H   +      +++        + +       + +  
Sbjct: 219 MNAKARLIGMTETRYVEPTGLSSHNQSSARDLATLVNVAHADPLLRELTTSPGYEVAVGR 278

Query: 198 KKYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +     NTN  V       G  KTG+   +G  +V  A    + LI V L +  + +R  
Sbjct: 279 RTLHFNNTNRLVKNPAWDIGLQKTGYISEAGRCLVMQAHIAGRKLIMVFLDSAGKFSRLG 338

Query: 255 VSASLLSM 262
            +  +   
Sbjct: 339 DAERVRHW 346


>gi|21222221|ref|NP_628000.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces coelicolor A3(2)]
 gi|256786685|ref|ZP_05525116.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
 gi|5457246|emb|CAB46934.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           coelicolor A3(2)]
          Length = 314

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 16/258 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK-KAMLTTPITIS 83
           +       +++  TG  +     D   +  S TK+MTA VV S  K    A +T  +  S
Sbjct: 57  SIAARGGFVMNNATGRSLYTKAADTRRSTGSTTKIMTAKVVLSQPKLNLDAKVTIQMAYS 116

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ------H 137
                   S++    G  +T+   L  L++ S  D A A+A+       +  +       
Sbjct: 117 DYIVSKNASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALADKFGSGRTRAARVKSFIGK 176

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---------HYF 188
           MN T+K+LGL  THF +  G+    +Y+T RD+  ++     +                 
Sbjct: 177 MNATAKSLGLKNTHFDSFDGIGNGKNYSTPRDLTKIASSAMKNSTFRTIVKTKKYTAKTR 236

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             KG       + NTN  +G++ GA G+KTG    + + +V +A +  +++I  +L +  
Sbjct: 237 TKKGGTRTMAPWTNTNTLLGSYSGAIGVKTGSGPEAKYCLVFAATRKGKTVIGTVLASSS 296

Query: 249 RNTRNKVSASLLSMGFYN 266
              R K +  L++  F  
Sbjct: 297 SAQRAKDATKLMNYAFTK 314


>gi|312869422|ref|ZP_07729583.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus oris
           PB013-T2-3]
 gi|311095085|gb|EFQ53368.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus oris
           PB013-T2-3]
          Length = 407

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 123/294 (41%), Gaps = 33/294 (11%)

Query: 1   MRQFLVIIAMA--MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           +++ L ++ +   +L+ +      +E        ++D +TG V+ E   +     AS++K
Sbjct: 3   IKRVLRLVMVLPLVLAELTTGALASERVNARAAVMIDASTGQVLYEQNANQKLPVASISK 62

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF----KKGSTMTLDNALKLLIVK 114
           L+T  VV   LK++     T + +S + +      +      ++G + T+   L   +VK
Sbjct: 63  LLTVAVVHDELKQRIITANTRVNVSADVAAIASDPAYSAIGVQEGQSYTVRELLNAAMVK 122

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG------------ 162
           SA+   +A+AE+     ++F   M+  +K +GL     +N  G+                
Sbjct: 123 SADGATLALAEADGSNLEEFNLKMDQKAKEIGLKNYTIVNPVGLTNGDLKGLKLEQYANN 182

Query: 163 --HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFLG--- 212
             +  TA D+A+L+  +   +P  +     K  +      K  K  N N  +        
Sbjct: 183 AENAMTANDVALLARYLVQTYPDLLQVTAQKDADFYIAKDKTVKADNLNKMLPGEQYAVP 242

Query: 213 ---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR--NTRNKVSASLLS 261
               DG+KTG + A+G + V++ +     +I V+L A     + R   +  L +
Sbjct: 243 GVKIDGLKTGTSAAAGPSFVSTGVYRGHRVITVVLHANGDGGDARFAATRQLYN 296


>gi|302379860|ref|ZP_07268343.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312338|gb|EFK94336.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ACS-171-V-Col3]
          Length = 384

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 146/341 (42%), Gaps = 13/341 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           LV+  +   +       +   +K+  Y  ++ +    +     + P   ASLTK+MT  +
Sbjct: 2   LVLAIVFQPALSKADSKLGFEDKVKAYYTIEQDYSQELLNYNENKPLAIASLTKIMTYVL 61

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           V   +   K  L   I I    ++   S    KKG  +T+++ ++ +++ S ND A  +A
Sbjct: 62  VMEDINANKYKLDDKIKIQTQYAKPEASTMQLKKGEELTVNDLIRGMMIVSGNDAADELA 121

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFP 182
                +  KFV+ MN  +  L L +  F +A G       +  +A+D+A L+     ++P
Sbjct: 122 VKSEGSVGKFVERMNKKAAELELESAKFYSASGYPENDKENLMSAKDLAKLTTYTINNYP 181

Query: 183 QYMHYFQIKGLEIKGKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASA----IQGD 236
           Q ++Y + + L +  +KY    T   +G   G DG KTG T  +G+ ++ +         
Sbjct: 182 QVLNYTKTQKLVMPSRKYEAATTVPFLGKIEGVDGFKTGTTEKAGYCLITTMSLKPNNPK 241

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
             +++V++GA  +  RN     +L     +      +N   +   +  L + V +   E+
Sbjct: 242 NKVVSVLMGAPTKYDRNTYQKIMLEYVRNSFEPMNILNS--EKPIETKLVDSVVDKKVEI 299

Query: 297 CTTQKEIINYNTQM---KEAKDKESHFIDFEKITLLKNKIT 334
             T+   I YN +    ++   K+      +K  ++   I 
Sbjct: 300 YPTEDVSILYNNKTGLQQKVDIKKDLKAPLKKGQVVGKVII 340


>gi|223985343|ref|ZP_03635415.1| hypothetical protein HOLDEFILI_02721 [Holdemania filiformis DSM
           12042]
 gi|223962698|gb|EEF67138.1| hypothetical protein HOLDEFILI_02721 [Holdemania filiformis DSM
           12042]
          Length = 498

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 117/333 (35%), Gaps = 20/333 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              K  +  ++D +TG V+ +   +    PAS+TK+MT  V         + +T    + 
Sbjct: 86  PQIKSDFVYMVDMDTGQVMIDKGSEDQIYPASMTKMMTLLVAIENAPALDSTMTLGPEVF 145

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              +E   S + FK+G T+++ + L  L + S  D A A+A     +E  FV  MN  + 
Sbjct: 146 AGLAEAHASVAGFKQGETVSVKDLLYGLFLPSGADAAQALALEEAGSETAFVGLMNEKAA 205

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK------- 196
            LG++ THF+N  G+    HYTT RD+  L      +      +   +            
Sbjct: 206 ELGMTGTHFVNTSGLHDPDHYTTLRDLETLMRYALENPTFNEIFQTRRYTATPSLHTGGL 265

Query: 197 ------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                   K  +T+ A        G KTG+T  +G  + + A +     + +   A   N
Sbjct: 266 VWESTLFAKISSTDPAKIDNDSILGGKTGYTNPAGLCLASIAEKNGTRYMLITAHAPVSN 325

Query: 251 TRNK--VSASLLSMGFYNKTDRKKINYIIKDFYQQNL-----SNEVPNISEEVCTTQKEI 303
           T      +  +    + + + +  +         +                ++       
Sbjct: 326 TPYHILDADHIYDYFYDHYSKQTVLTADQTLLETKVPFVLFNDKLTLKAGTDIVLNLPNG 385

Query: 304 INYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            + +    E +         E+   L      +
Sbjct: 386 YDLSALQIETQLDGELQAPIEEGQRLGMATITR 418


>gi|298241559|ref|ZP_06965366.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297554613|gb|EFH88477.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 313

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 8/245 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 ++D     V+ ++        AS TK+MTA V        +    T      + 
Sbjct: 70  NGSSAYIIDNANNRVLFDSDSQRSVPIASTTKIMTAVVTIENSNLDQI--VTVQQADLDQ 127

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                S +    G  + + + L  L++ S +D A+ +A  +  +   FV  MN  ++ LG
Sbjct: 128 LPPEASVAQLHVGDYLRIRHLLYGLLLPSGSDAALTLARVVGGSTDGFVAMMNAKAQALG 187

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKT-----DFPQYMHYFQIKGLEIKGKKYP 201
           L+ THF + HGV+  G+Y++A+D+  L+          +  +   Y        +   + 
Sbjct: 188 LAHTHFSSPHGVIPDGNYSSAQDLVKLARYAMRYQIFAEIVRQTEYHIPPTQYNRRYDWY 247

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLL 260
           NTN  + ++ G  G+KTG    +G+ +V +A++ ++ L    LGA    +  N     LL
Sbjct: 248 NTNQLLTSYSGVIGIKTGSGSGAGYCVVFAAVRNNRLLYGAELGAPGSFDVLNSDVTRLL 307

Query: 261 SMGFY 265
              F 
Sbjct: 308 DKAFA 312


>gi|324328943|gb|ADY24203.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 279

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|227511580|ref|ZP_03941629.1| possible S11 family D-Ala-D-Ala carboxypeptidase [Lactobacillus
           buchneri ATCC 11577]
 gi|227085225|gb|EEI20537.1| possible S11 family D-Ala-D-Ala carboxypeptidase [Lactobacillus
           buchneri ATCC 11577]
          Length = 442

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 135/370 (36%), Gaps = 44/370 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK--------LPYYTLLDTNTGHVIAENYPDHPWNP 53
           +   VI+ +A +       + A+                ++D  +G ++ +         
Sbjct: 23  KLMAVILVLACVIAALVPSATAQAKSKKPKYKFEAKEIYVMDAKSGQMLYQKNSHQKRPI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASL+KLMT Y+    + + +      + +SK   +   S          +    +K L  
Sbjct: 83  ASLSKLMTLYLTKKAIDQHQLSWNQKVPVSKPLIKMSKSYELGTFKIKKSKQYTVKQLYQ 142

Query: 114 KSANDIAVAIAESLCK-----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH------- 161
            +    + + A +L +     +  KF+  MN  ++  G+   HF+++ G+          
Sbjct: 143 AALIASSNSSAIALGELVAGGSNTKFINLMNRQAQKWGI-DAHFVSSSGLDNTDLTTYKL 201

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-- 210
                     +  +A+ ++ ++ ++  +FP    + +   +++  +   N+N  +     
Sbjct: 202 QVPGTGKKAQNMVSAKAISTVAAKVLGEFPSITKWSRKPSMKVGNQVLVNSNRLLKGDAF 261

Query: 211 ----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
                  DG+KTGFT  +G  +  S     + LIA I+ +   NT       L+     N
Sbjct: 262 YKKSEHVDGLKTGFTDTAGLCLTVSFWHKGRHLIATIIDS---NTIFSSMEKLVRAIEKN 318

Query: 267 KTDRK-KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            T     I+  I     + +S    +    +  T+    + +   +      +  +  +K
Sbjct: 319 YTTETYLIHQNIFTIGNRKVSASPQDSRATIWKTESSKPSISDSYE----LTTQKLPVKK 374

Query: 326 ITLLKNKITK 335
            + + N + K
Sbjct: 375 GSTVGNVLVK 384


>gi|262283155|ref|ZP_06060922.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sp. 2_1_36FAA]
 gi|262261407|gb|EEY80106.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sp. 2_1_36FAA]
          Length = 450

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/318 (20%), Positives = 122/318 (38%), Gaps = 40/318 (12%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               ++D NTG V+ ++  D   +PAS++KLMT Y++F  + + K    T I  S+    
Sbjct: 34  RSSLIIDGNTGDVLWQDNIDEVRDPASMSKLMTLYLLFEAMGQGKLSEDTIIKASQTDQN 93

Query: 89  YPPSNSTFKKG-----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                                +     ++  S     +            F+  MN+ +K
Sbjct: 94  IAGIYEISNNKIVAGVDYTISELITMTVVPSSNATTVMIANYLSNNDPDAFLDQMNSKAK 153

Query: 144 NLGLSATHFMNAHG---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
            LG++ TH+ NA G                    + TTARD+AIL++     +P  + Y 
Sbjct: 154 ELGMTNTHWYNASGAAASSFKGLYTPQRYDNNAANQTTARDLAILAYNFVKKYPGILKYT 213

Query: 189 QIKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSL 239
               + +K        +    +          G DG+KTG +    FN +A+  +G+Q +
Sbjct: 214 NKPVVTVKKGTPYEETFETYNYSVPGAKYGLEGVDGLKTGSSPRGAFNYIATVKRGEQRI 273

Query: 240 IAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           I+VI+G  D +       R+    +L+   + +   +K +           +  +   + 
Sbjct: 274 ISVIMGVGDWSDQDGEYYRHPFGNALIEKAYADYEYKKLLTAGEH-----KIDGKTYKLE 328

Query: 294 EEVCTTQKEIINYNTQMK 311
           ++   T K+  N    +K
Sbjct: 329 KDFYGTVKKGTNPKLVVK 346


>gi|227523786|ref|ZP_03953835.1| S11 family D-Ala-D-Ala carboxypeptidase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227089101|gb|EEI24413.1| S11 family D-Ala-D-Ala carboxypeptidase [Lactobacillus hilgardii
           ATCC 8290]
          Length = 442

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 135/370 (36%), Gaps = 44/370 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK--------LPYYTLLDTNTGHVIAENYPDHPWNP 53
           +   VI+ +A +       + A+                ++D  +G ++ +         
Sbjct: 23  KLMAVILVLACVIAALVPSATAQAKSKKPKYKFEAKEIYVMDAKSGQMLYQKNSHQKRPI 82

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASL+KLMT Y+    + + +      + +SK   +   S          +    +K L  
Sbjct: 83  ASLSKLMTLYLTKKAIDQHQLSWNQKVPVSKPLIKMSKSYELGTFKIKKSKQYTVKQLYQ 142

Query: 114 KSANDIAVAIAESLCK-----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH------- 161
            +    + + A +L +     +  KF+  MN  ++  G+   HF+++ G+          
Sbjct: 143 AALIASSNSSAIALGELVAGGSNTKFINLMNRQAQKWGI-NAHFVSSSGLDNTDLTTYKL 201

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-- 210
                     +  +A+ ++ ++ ++  +FP    + +   +++  +   N+N  +     
Sbjct: 202 QVPGTGKKAQNMVSAKAISTVAAKVLGEFPSITKWSRKPSMKVGNQVLVNSNRLLKGDAF 261

Query: 211 ----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
                  DG+KTGFT  +G  +  S     + LIA I+ +   NT       L+     N
Sbjct: 262 YKKSEHVDGLKTGFTDTAGLCLNVSFWHKGRHLIATIIDS---NTIFSSMEKLVRAIEKN 318

Query: 267 KTDRK-KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            T     I+  I     + +S    +    +  T+    + +   +      +  +  +K
Sbjct: 319 YTTETYLIHQNIFTIGNRKVSASPQDSRATIWKTESSKPSISDSYE----PTTQKLPVKK 374

Query: 326 ITLLKNKITK 335
            + + N + K
Sbjct: 375 GSTVGNVLVK 384


>gi|299534813|ref|ZP_07048142.1| penicillin-binding protein dacF precursor [Lysinibacillus
           fusiformis ZC1]
 gi|298729658|gb|EFI70204.1| penicillin-binding protein dacF precursor [Lysinibacillus
           fusiformis ZC1]
          Length = 278

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 13/260 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++++++  + ++  +F + S           +       LL+   G V+ E   D    
Sbjct: 1   MKKWMLLGCICIMVFLFYYTSKTYEFTHLELPSLHSRNALLLNEQ-GEVLYEKNADAIIY 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PASLTK+MTA V        +           N +    S + F+ G  +T ++ L   +
Sbjct: 60  PASLTKIMTAIVAIEMTDNLQTQTIVEPQTIANYTAQNASMAGFQAGDFVTTEDLLYGTL 119

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S  D    +A+++  +E KFV  MNN ++ LG+  T+F+N  G+    H ++ RD++ 
Sbjct: 120 LASGADATGTLADAVAGSEGKFVTLMNNKAQELGMHDTYFVNTSGLHDEAHVSSVRDISK 179

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG----ADGMKTGFTCASGFNI 228
           L      +   Y  +           +   TN       G      G KTG+T  +G  +
Sbjct: 180 LLRYALENPTFYQIFTSKSYTTYVPNQLIITNSLFTKLPGLDSPIIGGKTGYTPEAGLCL 239

Query: 229 VASAIQGDQSLIAVILGALD 248
                +  +S + +   A  
Sbjct: 240 ATIIEKEGKSFLFITTNAPS 259


>gi|224475783|ref|YP_002633389.1| penicillin binding protein 4 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420390|emb|CAL27204.1| penicillin binding protein 4 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 429

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 78/367 (21%), Positives = 146/367 (39%), Gaps = 52/367 (14%)

Query: 1   MRQFLVI-IAMAMLSNIFPFLSIAETNKLPYYTLLDT------------------NTGHV 41
           M++ +++ + +   S I    S A+TN      + +                    TG V
Sbjct: 1   MKKIILLTLLIFFASTIITPFSEADTNTPSPAQVANEYGYNISDDFNPEGAVNISQTGQV 60

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFK 97
           + + + D  W PAS+TKLMT Y+    +K  K  L   + I+++          SN+   
Sbjct: 61  LYDYHMDKKWYPASMTKLMTMYLTLEAVKAHKLSLNDKVKITEDDYRMSTLPKLSNTKLY 120

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
            G T T+   L++ +  S+N  A+ +A+ +      F   MN  +K LG++ TH++N  G
Sbjct: 121 PGETYTIKELLQITVSASSNAAALILAKKVSGNTSDFTDKMNKKAKELGMTKTHYVNPTG 180

Query: 158 VVQ--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                                 +A+D AILS R+  D P+ +++ +       G  Y   
Sbjct: 181 AENNLLQDFAPKKYKNEMSSRASAKDYAILSQRVIQDTPKILYFTKQLAPTQHGVTYYTF 240

Query: 204 NWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNTRN 253
           NW+         G DG+KTG +  + +N   +  +    +   I+GA D         RN
Sbjct: 241 NWSLEGAELGLKGTDGLKTGSSDIADYNHTITTKRDGFRIDQAIMGAGDFKHLGGEKERN 300

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           K+  S+++  F      K ++        Q ++ +   + +++     +           
Sbjct: 301 KMGNSIMNRSFDQYKYVKILSKGE-----QKINGKKYYVKKDLYDVLPKNYTKKDYKFVV 355

Query: 314 KDKESHF 320
           +D + H 
Sbjct: 356 EDGKVHI 362


>gi|229181304|ref|ZP_04308634.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
 gi|228602197|gb|EEK59688.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus 172560W]
          Length = 279

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D NTG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDANTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRPGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADAIGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|221067891|ref|ZP_03543996.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Comamonas
           testosteroni KF-1]
 gi|220712914|gb|EED68282.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Comamonas
           testosteroni KF-1]
          Length = 402

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S     +     ++D +T  V+           ASLTKLMT  ++       +  +  
Sbjct: 141 SVSDPLDLQSSVAYVIDQDTHEVLLSKNDQAVLPIASLTKLMTGLLISQA----RLPMDE 196

Query: 79  PITISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI+++  +    +S+  + G+T+T    + L ++ S N  A A+  +      +FVQ 
Sbjct: 197 MITITQDDVDTEKHSSSRLRVGTTLTRAEMMHLALMSSENRAAHALGRTYPGGLSQFVQL 256

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN+ +  LG+  T ++   G+      +      +++        +         + +  
Sbjct: 257 MNSKALQLGMKDTRYVEPTGLSSSNQSSARDLARLVAVAHADPLMREYSTSPGYEVAVGR 316

Query: 198 KK--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   + NTN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R  
Sbjct: 317 RTLQFNNTNRLVKSDNWDIGLQKTGYISEAGRCLVMQAHVAGRKLIMVFLDSAGKFSRLA 376

Query: 255 VSASLLSM 262
            +  +   
Sbjct: 377 DAERVRHW 384


>gi|319637748|ref|ZP_07992514.1| D-alanyl-D-alanine-endopeptidase [Neisseria mucosa C102]
 gi|317400903|gb|EFV81558.1| D-alanyl-D-alanine-endopeptidase [Neisseria mucosa C102]
          Length = 318

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 11/262 (4%)

Query: 7   IIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
             A++    +    ++A          + +  TG V+ +  PD     AS++KLM+A VV
Sbjct: 56  AFALSHADQVEAQAALAGPLLSSQSALIFNNKTGEVLYQKNPDRVMPIASISKLMSAMVV 115

Query: 66  FSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                     +  PITI++        + S    G+T+T    L L ++ S N    A+ 
Sbjct: 116 LDA----HLDMNEPITITEAEIDRLKGTGSRLSIGTTLTRGELLHLSLMSSENRATHALG 171

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
            +       FV  MN  +++LG+S++ F    G+    + +TARD+  +           
Sbjct: 172 RTYPGGMSAFVAAMNAKAQSLGMSSSRFYEPTGL-NFQNVSTARDLNRMVAAASKYPLIR 230

Query: 185 MHYFQIKGLEI---KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLI 240
            +     G        + Y N+N  V       +  KTG+   +G ++V  A   +Q + 
Sbjct: 231 KNSTSNYGSVWTANGRQNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPIT 290

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L +    TR   +  + S 
Sbjct: 291 IVLLNSPSSTTRVNDARKIESW 312


>gi|222098460|ref|YP_002532518.1| serine-type d-ala-d-ala carboxypeptidase (d-alanyl-d-alanine
           carboxypeptidase) [Bacillus cereus Q1]
 gi|221242519|gb|ACM15229.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Bacillus cereus Q1]
          Length = 279

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +       +  K  N           A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|330808569|ref|YP_004353031.1| serine-type D-Ala-D-Ala carboxypeptidase (D-alanyl-D-alanine
           carboxypeptidase) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376677|gb|AEA68027.1| putative serine-type D-Ala-D-Ala carboxypeptidase
           (D-alanyl-D-alanine carboxypeptidase) [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 312

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 108/282 (38%), Gaps = 24/282 (8%)

Query: 1   MRQFLVIIAMAMLSN---IFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENY 46
           M+  L II++ +      I   +   ET   P              LLD  T  V+  + 
Sbjct: 1   MKIRLSIISLFIAFTGSFITQNVVAQETIAAPRDTTKLQVASGSAMLLDLQTDKVVYSSN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLD 105
           PD     AS+TKLMT  +V    +     L   I+I+  N  E     S  K  S ++  
Sbjct: 61  PDVVVPIASVTKLMTGLIVLDAKQ----NLDEYISITIANTPEMKGVFSRVKLNSELSRR 116

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L + ++ S N  A ++A         F+  MN  +K LG+++TH++   G+  H   T
Sbjct: 117 DVLLIALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVST 176

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY-----PNTNWAVGTFLGADGMKTGF 220
                 +L    K      +   + K +  +   Y        +            KTGF
Sbjct: 177 ARDLTKLLIAARKYPLLSELSTTKEKTVTFRKPVYSLGFRNTDHLIHKANWDIQLTKTGF 236

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           T  +G  +V     G++ +  VIL A  + T    ++ + S 
Sbjct: 237 TNEAGHCLVLVTKMGNRPMALVILDAFGKFTHFADASRIRSW 278


>gi|227113033|ref|ZP_03826689.1| D-alanyl-D-alanine endopeptidase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 315

 Score =  118 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 107/281 (38%), Gaps = 24/281 (8%)

Query: 2   RQFLVIIAMAMLSNIFP-----FLSIAE---------TNKLPYYTLLDTNTGHVIAENYP 47
           + F + +   ++ +         ++ A                  ++D    H++  + P
Sbjct: 3   KNFKLSLFGLLVLSTHAVMLPQAVAKAPTYSAGTAHQEIASGSAMVVDLRDNHILYSSNP 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D     AS+TKLMTA VV    +    +++  I+ +K         S  +  S ++  + 
Sbjct: 63  DVVVPIASVTKLMTALVVLDANQPLDEIISVDISQTKE---MKGVYSRVRLNSEISRRDM 119

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L L ++ S N  A ++A       + F++ MN  ++ LG++ T ++   G+    + +TA
Sbjct: 120 LLLALMSSENRAAASLAHHYPGGYQAFIRAMNAKARALGMAHTRYVEPTGL-SINNVSTA 178

Query: 168 RDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFT 221
           RD+  L      + +                    + + NTN  V          KTGFT
Sbjct: 179 RDLTKLLIASKQYPLLGQLSTTQEKTATFSHPAYSQPFRNTNHLVYKADWSIQLTKTGFT 238

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V   +   + +  V+L A  + T    +  L   
Sbjct: 239 NQAGHCLVMRTVINQRPVALVVLDAFGKYTHFADANRLRKW 279


>gi|289770578|ref|ZP_06529956.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
 gi|289700777|gb|EFD68206.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 260

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 16/259 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK-KAMLTTPITI 82
            +       +++  TG  +     D   +  S TK+MTA VV S  K    A +T  +  
Sbjct: 2   PSIAARGGFVMNNATGRSLYTKAADTRRSTGSTTKIMTAKVVLSQPKLNLDAKVTIQMAY 61

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ------ 136
           S        S++    G  +T+   L  L++ S  D A A+A+       +  +      
Sbjct: 62  SDYIVSKNASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALADKFGSGRTRAARVKSFIG 121

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---------HY 187
            MN T+K+LGL  THF +  G+    +Y+T RD+  ++     +                
Sbjct: 122 KMNATAKSLGLKNTHFDSFDGIGNGKNYSTPRDLTKIASSAMKNSTFRTIVKTKKYTAKT 181

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
              KG       + NTN  +G++ GA G+KTG    + + +V +A +  +++I  +L + 
Sbjct: 182 RTKKGGTRTMAPWTNTNTLLGSYSGAIGVKTGSGPEAKYCLVFAATRKGKTVIGTVLASS 241

Query: 248 DRNTRNKVSASLLSMGFYN 266
               R K +  L++  F  
Sbjct: 242 SSAQRAKDATKLMNYAFTK 260


>gi|331700813|ref|YP_004397772.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128156|gb|AEB72709.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus buchneri
           NRRL B-30929]
          Length = 434

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 124/362 (34%), Gaps = 35/362 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M   + I+ M+ +S +    +  +  +     ++D  TG V+ +         ASL+KLM
Sbjct: 19  MMTLVSILTMSAIS-VSAKSANQQKFQAKEAYVMDAETGQVLYQKNGSTKRPIASLSKLM 77

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+    +   +      + +         S          + +  ++ L   +    +
Sbjct: 78  TLYLTKKAIDNHQITWNQKVPVDDQLRRMSKSYEVGGFRIKRSKEYTVRDLYKAALIASS 137

Query: 121 VAIAESLCK-----TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-------------- 161
              A +L K        +F++ MN  +   G+    F+++ G+                 
Sbjct: 138 NPSAIALGKLVGGGNNTEFIKMMNEQAHAWGI-DATFVSSSGLDNTDLSKYHYQVPHTTS 196

Query: 162 --GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW------AVGTFLGA 213
              +  +A+ ++ ++ ++   FP    + +   +++  +   N+N               
Sbjct: 197 KAQNMVSAKAISTVAAKVLEIFPTITQWSKQPSMKVGNQVLVNSNRLLPGSAFYHKSTHV 256

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI 273
           DG+KTGFT  +G  I  +     + LIA I+ +   NT       L+S         K  
Sbjct: 257 DGLKTGFTVNAGLCITVTYWHDGRHLIATIIDS---NTLYTSMNKLISTVNQQYQPTKVA 313

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                     +     P    E    Q++  + +     +  K    +   K  L+ N I
Sbjct: 314 LKSHAFSIDGHQLTATPK-DPEAVIWQRKGTDGSHVTNYSATK--TTLPITKGQLVGNAI 370

Query: 334 TK 335
            K
Sbjct: 371 VK 372


>gi|260598596|ref|YP_003211167.1| D-alanyl-D-alanine endopeptidase [Cronobacter turicensis z3032]
 gi|260217773|emb|CBA32213.1| D-alanyl-D-alanine endopeptidase [Cronobacter turicensis z3032]
          Length = 269

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 12/243 (4%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KN 85
                 ++D  T  V+  ++PD     AS+TK+MTA VV          L   +T+   +
Sbjct: 2   ASGSAMIVDLRTNEVLFSSHPDLVRPIASITKVMTAMVVLDAS----LPLDEMLTVDISH 57

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             E     S  +  S ++  N L L ++ S N  A ++A         F++ MN  +K L
Sbjct: 58  TPEMKGIYSRVRLNSQISRKNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAKAL 117

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           G+  T F+   G+    + +TARD+  L      + +                      +
Sbjct: 118 GMRNTRFVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREEMATFANPAYTLPF 176

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  V          KTGFT A+G  ++   +  ++ +  V++ A  + T    ++ L
Sbjct: 177 RNTNHLVYRDNWNIQLTKTGFTNAAGHCLMMRTLIKNRPVTLVVMDAFGKYTHFADASRL 236

Query: 260 LSM 262
            + 
Sbjct: 237 RTW 239


>gi|295396423|ref|ZP_06806585.1| serine-type D-Ala-D-Ala carboxypeptidase [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294970725|gb|EFG46638.1| serine-type D-Ala-D-Ala carboxypeptidase [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 403

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +         + + + +TG V+  +  D   +PAS+ KL+TA  +   L      +    
Sbjct: 39  TSPPKPAADAWLVANLDTGEVLVSHGEDVVSSPASVQKLLTALALVDELP----DVKKKH 94

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            IS+  ++   +     + +  ++D   + +++ SAND A A+ E++    K   + M+ 
Sbjct: 95  RISEADTQVDGTRVGLLRDNEYSIDLLFRSMLMSSANDSAYALGEAVGGQHKAL-ELMHR 153

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-----------HYFQ 189
            ++ LG+ +T      G+   G  TT  D+  L+     +                 Y  
Sbjct: 154 KARQLGMDSTVVGTTSGLDAPGQGTTIDDLLRLAHEFTKNKYLMKVVQTQTLDFPGGYDH 213

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            K  ++KG +  N    +G   GA G+K G+T  +  + + +A +GD +  AV+L A   
Sbjct: 214 DKKKKVKGYQIQNHTRLIGLVEGAIGLKNGYTQEARGSFLGAATRGDTTYAAVVLRAQT- 272

Query: 250 NTRNKVSASLLSMGFYNKTDR 270
            +R + +A LL+  F     +
Sbjct: 273 QSR-QAAADLLNWAFNQTDPK 292


>gi|145478811|ref|XP_001425428.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392498|emb|CAK58030.1| unnamed protein product [Paramecium tetraurelia]
          Length = 313

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 37/274 (13%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT-PITI 82
            +     + +LD  TG +I           AS+TK MTAYV     ++ K   T   +++
Sbjct: 34  PSITAHTWVILDAQTGRLIWGKNEHSNREIASITKSMTAYVTIKICEQLKIDPTQVTVSV 93

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI------------------- 123
           S+ A++   ++S  ++G ++TL + L  L++ S ND A AI                   
Sbjct: 94  SEYATQIGGTSSNLQEGDSLTLLDLLHGLMLPSGNDSAQAIAENFGVYLYFQSKYFQQKI 153

Query: 124 --------AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
                      +    + FV  MN T++ LGLS T+F N HG+    + +TA D+A L +
Sbjct: 154 DSIDNDNNTIHVNNPAQYFVAEMNATAQKLGLSNTYFTNPHGLANRLNRSTAYDVAKLCY 213

Query: 176 RIK-------TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
                         +          + +  K+ NTN  +    G  G+KTG T  +G  +
Sbjct: 214 YAMKLPLFAQIVRTKEYSCTVTNLGQTRVLKWENTNKLLEQ--GFSGIKTGVTNDAGPCL 271

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            +  I    S I V+L    +  R   S  L+  
Sbjct: 272 ASHFISRKHSYILVVLNCNSKEQRWVDSCRLIDW 305


>gi|237745522|ref|ZP_04576002.1| murein-dd-endopeptidase, serine peptidase, merops family s11
           [Oxalobacter formigenes HOxBLS]
 gi|229376873|gb|EEO26964.1| murein-dd-endopeptidase, serine peptidase, merops family s11
           [Oxalobacter formigenes HOxBLS]
          Length = 431

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 6/243 (2%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             + K     +LD +   ++ E   D     AS+TKLMTA VV   +++   +L      
Sbjct: 179 PLSLKSNAALVLDESNLEILFEKNSDIALPMASITKLMTALVVVESMQDMNEILEITE-- 236

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            ++      ++S  + G+ MT  N L L ++ S N  A A+  +       FV  MN  +
Sbjct: 237 -EDVDVQKHTSSRLRVGTKMTRANLLHLALMSSENRAAAALGRNYPGGISAFVNAMNIKA 295

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK--GKKY 200
           + LG+S + ++++ G+      +      ++    +    +         ++       Y
Sbjct: 296 QVLGMSDSRYVDSSGLSSGNIASARDLAKLVMAAAQYPILRKYSTDTYYSIDDGLREMHY 355

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  V          KTG+   +G  +V  A+   + ++ V L +  +  R   +  +
Sbjct: 356 GNTNGLVHNPEWHIRLQKTGYISEAGQCLVMQAVINGRPIVMVFLDSKGKGARLADAQRI 415

Query: 260 LSM 262
            S 
Sbjct: 416 RSW 418


>gi|260663757|ref|ZP_05864644.1| D-alanyl-D-alanine [Lactobacillus fermentum 28-3-CHN]
 gi|260551706|gb|EEX24823.1| D-alanyl-D-alanine [Lactobacillus fermentum 28-3-CHN]
          Length = 431

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 117/338 (34%), Gaps = 29/338 (8%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                   +D  TG V+     +     AS++KL+T  V+   +K  K    T + ++K 
Sbjct: 56  VNAKAVIAIDATTGQVLYAKNANTQLAIASISKLITVGVIEQEIKAGKLSWNTKVKVTKE 115

Query: 86  A----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                     SN T   G + T+    +  ++KSA+  A+ ++ +   +   FV+ M   
Sbjct: 116 EAKLSENTEYSNITLTAGKSYTVKELTEAAMIKSADAAAITLSRATGDSTASFVKKMQTF 175

Query: 142 SKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWRIKTDFPQYMHY 187
            K  G++     N  G+                  +  TA D+A L+  +  ++P  ++ 
Sbjct: 176 VKKAGVTDAKLYNQVGLTNSQMGSYGLKGVAKNAENEMTATDVAKLAQYLIKNYPSLLNI 235

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLG------ADGMKTGFTCASGFNIVASAIQGDQSLIA 241
            ++    I G      N  +            DG+KTG +  +G   V++       +I 
Sbjct: 236 TKMTSTTIDGTTVTTINKMLPGQSDAPTQVKIDGLKTGTSDKAGACFVSTGTYQGHRIIT 295

Query: 242 VILGAL-DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           V+L A    + R   +A+L  +     T       +        ++        ++   +
Sbjct: 296 VVLHATGGGDERFTQTANLYHLIANEYTAYTVQPSVAAMVPNGKVTTTTLTTQGKITLWK 355

Query: 301 KEII----NYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           K+      +     K A          +K  ++     
Sbjct: 356 KDGTLLSPSLAINSKAADKNGKLTAPVKKGQVVGELTY 393


>gi|42784193|ref|NP_981440.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
 gi|42740124|gb|AAS44048.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
          Length = 279

 Score =  118 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +       +  K  N           A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|184156063|ref|YP_001844403.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus fermentum IFO
           3956]
 gi|183227407|dbj|BAG27923.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus fermentum IFO
           3956]
          Length = 417

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 136/348 (39%), Gaps = 33/348 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           +     + + T        +D  TG V+ E      +  AS+ K++T  V+   +++ K 
Sbjct: 25  SAGAVANASSTVDARAAITIDAETGQVLYEKNATKRYPIASVIKILTLAVIEQDIEQGKL 84

Query: 75  MLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                I ISK      +++  SN    +G + T+ + ++ +++ SA+  A A+A +   +
Sbjct: 85  KWDQKIKISKEVAKVANDWRFSNVQLNEGESYTVKSLVESMMIVSADGSAEALALASAGS 144

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
              F Q M   +K  G++     N  G+                  +  +A+D+A ++  
Sbjct: 145 TAAFNQKMQAVAKEAGVTDAKIYNMIGLANGDLGEMRLKNVSKKAENQLSAKDVAKIARY 204

Query: 177 IKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFL------GADGMKTGFTCASG 225
           +   +P  +   + K +       +  +  N N  +            DG+KTG T +SG
Sbjct: 205 LVEKYPSVLEITKQKFVNFQVSDSQQYEMVNINSMLPQNAAASTHGEVDGLKTGMTDSSG 264

Query: 226 FNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           +  V +     + LI V+L      N + KV+ +++                + DF +  
Sbjct: 265 YCFVGTGTFNGRRLITVVLKVPGEYNNQFKVTDAMIGQVLDKYQYLTVNK--LSDFKKGV 322

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            S  V +  ++   T    +   T +  AK+      D E I L KNK
Sbjct: 323 QSVTVAHAEKKGPKTVGLTLKKATTLWLAKNTSLKKADVELI-LDKNK 369


>gi|262164415|ref|ZP_06032153.1| murein-DD-endopeptidase [Vibrio mimicus VM223]
 gi|262026795|gb|EEY45462.1| murein-DD-endopeptidase [Vibrio mimicus VM223]
          Length = 317

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 12/277 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D  T  VI  + PD     AS+TKLMTA V        K  + T + I+
Sbjct: 44  QELAANSALVIDLKTNEVIYSSNPDAVRPIASVTKLMTAIVTLDA----KLPMDTKLPIT 99

Query: 84  -KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            K A E    +S  + GS ++  + L L ++ S N  A ++A       K F++ MNN +
Sbjct: 100 IKEAKEMKGVHSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNNKA 159

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY-- 200
           K LG+  T F+   G+ +    +    + +L    K      +   + K +     +Y  
Sbjct: 160 KALGMKNTRFVEPTGLSEKNVSSARDLVLLLKASKKYPMLGQLSATEKKTVTFAKPRYSL 219

Query: 201 --PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
              NTN  V       D  KTGFT A+G  +V     G + +  V+L    + +    + 
Sbjct: 220 DFRNTNRLVFNDNWKIDLTKTGFTNAAGHCLVMRTQMGKRQVAFVVLDTKGKLSPVGDAN 279

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
            L +           +    K + +Q    ++  IS+
Sbjct: 280 RLRTWL--ETGKVTPLPADAKQYKKQRNQEQIAKISD 314


>gi|325982954|ref|YP_004295356.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Nitrosomonas
           sp. AL212]
 gi|325532473|gb|ADZ27194.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Nitrosomonas
           sp. AL212]
          Length = 275

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 13/270 (4%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M+Q F++   +   +            K     + +    +VI +   D     AS+TKL
Sbjct: 1   MKQVFILSCILFFYTGSSLAQKNNPDIKSQAALVFNAQNEYVIYDKNADKVMPIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSAND 118
           MTA V        +      ITI     +     ++     S ++    LKL ++ S N 
Sbjct: 61  MTAIVTLDA----RLSPNEIITIENADVDKLKYTTSRLPVGSKLSRHELLKLSLMSSENR 116

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----- 173
            A A+  +     + FV  MN  +K +G+ ++ F+   G+    +  TARD+A L     
Sbjct: 117 AAAALGRTYPGGTQAFVNAMNIKAKQMGMISSRFVEPTGL-SSNNVATARDLAKLVAASN 175

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASA 232
            + +  +F     +    G +    +Y N+N  V +     D  KTG+   +G  +V  A
Sbjct: 176 RYTVIREFSTASQHSVSPGNKRGQLQYVNSNSLVRSQNWTIDVSKTGYLNEAGRCLVMHA 235

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSM 262
               Q ++ V+L +  +NTR   +  +   
Sbjct: 236 KISGQPVVIVLLNSWGKNTRIGDANRVKKW 265


>gi|225075807|ref|ZP_03719006.1| hypothetical protein NEIFLAOT_00823 [Neisseria flavescens
           NRL30031/H210]
 gi|224952840|gb|EEG34049.1| hypothetical protein NEIFLAOT_00823 [Neisseria flavescens
           NRL30031/H210]
          Length = 310

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 10/249 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                         + +  TG V+ +  PD     AS++KLM+A VV          +  
Sbjct: 61  ATLAGPLLSSQSALIFNNKTGEVLYQKNPDRVMPIASISKLMSAMVVLDA----HLDMNE 116

Query: 79  PITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           PITI++        + S    G+T+T    L L ++ S N    A+  +       FV  
Sbjct: 117 PITITEAEIDRLKGTGSRLSIGTTLTRGELLHLSLMSSENRATHALGRTYPGGLSAFVAA 176

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK---GLE 194
           MN  +++LG+S++ F    G+    + +TARD+  +            +           
Sbjct: 177 MNAKAQSLGMSSSRFYEPTGL-NFQNVSTARDLNRMVAAASKYPLIRKNSTSNYGSVWTV 235

Query: 195 IKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
              + Y N+N  V       +  KTG+   +G ++V  A   +Q +  V+L +    TR 
Sbjct: 236 NGRQNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPSSTTRV 295

Query: 254 KVSASLLSM 262
             +  + S 
Sbjct: 296 NDARKIESW 304


>gi|228955274|ref|ZP_04117282.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804407|gb|EEM51018.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 279

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|264677800|ref|YP_003277706.1| peptidase S11, D-alanyl-D-alanine [Comamonas testosteroni CNB-2]
 gi|262208312|gb|ACY32410.1| peptidase S11, D-alanyl-D-alanine [Comamonas testosteroni CNB-2]
          Length = 404

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 99/248 (39%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S     +     ++D +T  V+           ASLTKLMT  ++       +  +  
Sbjct: 143 SVSDPLDLQSSVAYVIDQDTHEVLLSKNDQAVLPIASLTKLMTGLLISQA----RLPMDE 198

Query: 79  PITISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI+++  +    +S+  + G+T+T    + L ++ S N  A A+  +      +FVQ 
Sbjct: 199 MITITQDDVDTEKHSSSRLRVGTTLTRAEMMHLALMSSENRAAHALGRTYPGGLAQFVQL 258

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN+ +  LG+  T ++   G+      +      +++        +         + +  
Sbjct: 259 MNSKALQLGMKDTRYVEPTGLSSSNQSSARDLARLVAVAHADPLMREYSTSPGYEVAVGR 318

Query: 198 KK--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   + NTN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R  
Sbjct: 319 RTLQFNNTNRLVKSDNWDIGLQKTGYISEAGRCLVMQAHVAGRKLIMVFLDSAGKFSRLA 378

Query: 255 VSASLLSM 262
            +  +   
Sbjct: 379 DAERVRHW 386


>gi|299531620|ref|ZP_07045025.1| D-alanyl-D-alanine endopeptidase [Comamonas testosteroni S44]
 gi|298720336|gb|EFI61288.1| D-alanyl-D-alanine endopeptidase [Comamonas testosteroni S44]
          Length = 404

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 10/249 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S     +     ++D +T  V+           ASLTKLMT  ++       +  +  
Sbjct: 143 SVSDPLDLQSSVAYVIDQDTHEVLLSKNDQAVLPIASLTKLMTGLLISQA----RLPMDE 198

Query: 79  PITISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI+++  +    +S+  + G+T+T    + L ++ S N  A A+  +      +FVQ 
Sbjct: 199 MITITQDDVDTEKHSSSRLRVGTTLTRAEMMHLALMSSENRAAHALGRTYPGGLAQFVQL 258

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN+ +  LG+  T ++   G+      ++ARD+A L      D     +           
Sbjct: 259 MNSKALQLGMKDTRYVEPTGLSSSNQ-SSARDLARLVAVAHADPLMREYSTSPGYEVAVG 317

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +  ++ NTN  V +     G  KTG+   +G  +V  A    + LI V L +  + +R 
Sbjct: 318 RRTLQFNNTNRLVKSDNWDIGLQKTGYISEAGRCLVMQAHVAGRKLIMVFLDSAGKFSRL 377

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 378 ADAERVRHW 386


>gi|241760382|ref|ZP_04758477.1| D-alanyl-D-alanine endopeptidase [Neisseria flavescens SK114]
 gi|261379793|ref|ZP_05984366.1| penicillin-binding protein 7 [Neisseria subflava NJ9703]
 gi|241319260|gb|EER55738.1| D-alanyl-D-alanine endopeptidase [Neisseria flavescens SK114]
 gi|284797478|gb|EFC52825.1| penicillin-binding protein 7 [Neisseria subflava NJ9703]
          Length = 318

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 105/262 (40%), Gaps = 11/262 (4%)

Query: 7   IIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
             A++    +    ++A          + +  TG V+ +  PD     AS++KLM+A VV
Sbjct: 56  AFALSHADQVEAQAALAGPLLSSQSALIFNNKTGEVLYQKNPDRVMPIASISKLMSAMVV 115

Query: 66  FSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                     +  PITI++        + S    G+T+T    L L ++ S N    A+ 
Sbjct: 116 LDA----HLDMNEPITITEAEIDRLKGTGSRLSIGTTLTRGELLHLSLMSSENRATHALG 171

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
            +       FV  MN  +++LG++++ F    G+    + +TARD+  +           
Sbjct: 172 RTYPGGMSAFVAAMNAKAQSLGMTSSRFYEPTGL-NFQNVSTARDLNRMVAAASKYPLIR 230

Query: 185 MHYFQIKGLEI---KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLI 240
            +     G        + Y N+N  V       +  KTG+   +G ++V  A   +Q + 
Sbjct: 231 KNSTSNYGSVWTANGRQNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPIT 290

Query: 241 AVILGALDRNTRNKVSASLLSM 262
            V+L +    TR   +  + S 
Sbjct: 291 IVLLNSPSSTTRVNDARKIESW 312


>gi|332974550|gb|EGK11470.1| D-alanyl-D-alanine endopeptidase PbpG [Kingella kingae ATCC 23330]
          Length = 313

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 11/244 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      +++ NTG +  +   D+  + AS++KLM A VV       +  +   IT
Sbjct: 66  AGPLLNAQSALIMNANTGQIFYQKNMDNVRSIASISKLMAAMVVLDA----RLDMNQRIT 121

Query: 82  ISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           I++        + S    G+T+T    L L ++ S N    A+  +       FVQ MN 
Sbjct: 122 ITEAEIDRLKGTGSRLSIGTTLTRGQMLHLGLMSSENRAIHALGRTYPGGMSAFVQAMNA 181

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW----RIKTDFPQYMHYFQIKGLEIK 196
            +++LG+  + F    G+    + +TAR+++++        +          +      K
Sbjct: 182 KARSLGMMNSRFYEPTGL-DPRNVSTARELSMMVRAASQYPQIRQLSTAQSGEAYTSTGK 240

Query: 197 GKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
            ++Y N+N  V          KTG+   +G ++V     G + +I V+LG+    TR   
Sbjct: 241 FEQYKNSNIFVREGNWNITVQKTGYIREAGRSMVMQTQMGREPVIIVVLGSQTTTTRAND 300

Query: 256 SASL 259
           + +L
Sbjct: 301 ARAL 304


>gi|299783572|gb|ADJ41570.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus fermentum CECT
           5716]
          Length = 421

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 136/348 (39%), Gaps = 33/348 (9%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           +     + + T        +D  TG V+ E      +  AS+ K++T  V+   +++ K 
Sbjct: 29  SAGAVANASSTVDARAAITIDAETGQVLYEKNATKRYPIASVIKILTLAVIEQDIEQGKL 88

Query: 75  MLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                I ISK      +++  SN    +G + T+ + ++ +++ SA+  A A+A +   +
Sbjct: 89  KWDQKIKISKEVAKVANDWRFSNVQLNEGESYTVKSLVESMMIVSADGSAEALALASAGS 148

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWR 176
              F Q M   +K  G++     N  G+                  +  +A+D+A ++  
Sbjct: 149 TAAFNQKMQAVAKEAGVTDAKIYNMIGLANGDLGEMRLKNVSKKAENQLSAKDVAKIARY 208

Query: 177 IKTDFPQYMHYFQIKGLEI-----KGKKYPNTNWAVGTFL------GADGMKTGFTCASG 225
           +   +P  +   + K +       +  +  N N  +            DG+KTG T +SG
Sbjct: 209 LVEKYPSVLEITKQKFVNFQVSDSQQYEMVNINSMLPQNAAASTHGEVDGLKTGMTDSSG 268

Query: 226 FNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           +  V +     + LI V+L      N + KV+ +++                + DF +  
Sbjct: 269 YCFVGTGTFNGRRLITVVLKVPGEYNNQFKVTDAMIGQVLDKYQYLTVNK--LSDFKKGV 326

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
            S  V +  ++   T    +   T +  AK+      D E I L KNK
Sbjct: 327 QSVTVAHAEKKGPKTVGLTLKKATTLWLAKNTSLKKADVELI-LDKNK 373


>gi|260891367|ref|ZP_05902630.1| beta-lactamase [Leptotrichia hofstadii F0254]
 gi|260858750|gb|EEX73250.1| beta-lactamase [Leptotrichia hofstadii F0254]
          Length = 492

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 118/308 (38%), Gaps = 19/308 (6%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G ++ E         ASLTK+M   V    +    A L   I  +        S    K 
Sbjct: 151 GKILKEKMSRQKHPIASLTKVMNILVALEQVDRGNAKLDDKICFTPEFVNMGGSWLNAKA 210

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G   TL + L+  I+ SAN+ A  +A  +       FVQ MN+ +K LG++ T +    G
Sbjct: 211 GDCYTLRDLLRAEIIYSANNAAYLVAHHIGKGNIDNFVQLMNDKAKELGMNDTRYYTPAG 270

Query: 158 VVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQ----IKGLEIKGKKYPNTNWAVG 208
           +       +   +TA DM +L  R   D        +    ++  E +   Y N N  + 
Sbjct: 271 LPSSMTNKNMDISTAYDMYLLGKRAIRDERLRAWMKESELVLQNSEGEDVVYSNRNHLLD 330

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            F G  G+KTGF   +G+N++ S+  G+  +I+V LG    + R +         F    
Sbjct: 331 QF-GIYGLKTGFHAQAGYNMIVSSKIGNLEIISVTLGNKSDDARTEDQEQ----EFTQLE 385

Query: 269 DR--KKINYIIKDFYQ-QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI-DFE 324
            R         +   + +  + E   I   + T   ++ N N + +    + +       
Sbjct: 386 KRMIPVYKAGQEIGGKFKIKNAEQKEIKGVLSTNVYQLDNTNYKFEVKDLQVTAEKEGIS 445

Query: 325 KITLLKNK 332
           K  ++   
Sbjct: 446 KGDVIGKL 453


>gi|152981425|ref|YP_001352421.1| D-alanyl-D-alanine-endopeptidase [Janthinobacterium sp. Marseille]
 gi|151281502|gb|ABR89912.1| D-alanyl-D-alanine-endopeptidase [Janthinobacterium sp. Marseille]
          Length = 436

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 6/241 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +LD +T  V+ E   +     AS+TKLMT  VV    ++   +L       +
Sbjct: 181 ALASNVALVLDQSTSAVLFEKNANVTLPIASITKLMTGLVVVEAQQDMNEILEVTE---E 237

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +      S+S  + GS ++  N L + ++ S N  A A+        + FV  MN  +++
Sbjct: 238 DIDREKNSSSRLRVGSQLSRANMLHIALMSSENRAASALGRHYPGGIRAFVAAMNAKARS 297

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK--KYPN 202
           LG++ TH++++ G+  +   + A    ++         +         +E  G+  +Y N
Sbjct: 298 LGMNGTHYVDSTGLSSNNVASAADLAKLVIAASNHSILRQYSTDTKYVVEPGGRALQYAN 357

Query: 203 TNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           +N  V       G  KTG+   +G  +V  A    + ++ + L +  + +R   +A +  
Sbjct: 358 SNRLVNNPDWEIGIQKTGYISEAGRCLVMQANINGRPIVMIFLDSKGKLSRLGDAARIRK 417

Query: 262 M 262
            
Sbjct: 418 W 418


>gi|30023045|ref|NP_834676.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
 gi|29898605|gb|AAP11877.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 14579]
          Length = 273

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG V+     D    PAS+ K+MT  
Sbjct: 9   FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDADTGEVLYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 124 SIAEHIAGSKNEFVKMMNTRAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 183

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 271


>gi|218234016|ref|YP_002369811.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           B4264]
 gi|229049698|ref|ZP_04194255.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|229153200|ref|ZP_04281379.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
 gi|296505443|ref|YP_003667143.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|218161973|gb|ACK61965.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus B4264]
 gi|228630299|gb|EEK86949.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus m1550]
 gi|228722611|gb|EEL73999.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH676]
 gi|296326495|gb|ADH09423.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG V+     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDADTGEVLYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 277


>gi|134094059|ref|YP_001099134.1| D-alanyl-D-alanine-endopeptidase [Herminiimonas arsenicoxydans]
          Length = 400

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 6/252 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                    A         ++D +T  V+ E   +     AS+TKLMT  VV    ++  
Sbjct: 134 IAGLSMTRDALALASSVALVIDQSTSEVLFEKNANVTLPIASITKLMTGLVVVEAQQDMN 193

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
            ML       ++      S+S  + GS ++  N L + ++ S N  A A+        + 
Sbjct: 194 EMLEVTA---EDIDREKNSSSRLRVGSQLSRANMLHIALMSSENRAASALGRHYPGGLRA 250

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  +K+LG+  TH++++ G+  +   +      ++         +         +
Sbjct: 251 FVATMNAKAKSLGMRGTHYVDSTGLSSNNVASARDLAKLVVEAYNHPILRQYSTDSKYVV 310

Query: 194 EIKGK--KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           E  G+  +Y N+N  V       G  KTG+   +G  +V      ++ ++ + L +  + 
Sbjct: 311 EPGGRALQYANSNRLVTNPDWEIGIQKTGYISEAGRCLVMQTNIKERPIVMIFLDSKGKF 370

Query: 251 TRNKVSASLLSM 262
           +R   +A +   
Sbjct: 371 SRLGDAARIRKW 382


>gi|258625555|ref|ZP_05720443.1| D-alanyl-D-alanine endopeptidase [Vibrio mimicus VM603]
 gi|258582148|gb|EEW07009.1| D-alanyl-D-alanine endopeptidase [Vibrio mimicus VM603]
          Length = 317

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 12/277 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D  T  VI  + PD     AS+TKLMTA V        K  + T + I+
Sbjct: 44  QELAANSALVIDLKTNEVIYSSNPDAVRPIASVTKLMTAIVTLDA----KLPMDTKLPIT 99

Query: 84  -KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            K A E    +S  + GS ++  + L L ++ S N  A ++A       K F++ MNN +
Sbjct: 100 IKEAKEMKGIHSRVRIGSEISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNNKA 159

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY-- 200
           K LG+  T F+   G+ +    +    + +L    K      +   + K +     +Y  
Sbjct: 160 KALGMKNTRFVEPTGLSEKNVSSARDLVLLLKASKKYPMLGQLSATEKKTVTFAKPRYSL 219

Query: 201 --PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
              NTN  V       D  KTGFT A+G  +V     G + +  V+L    + +    + 
Sbjct: 220 DFRNTNRLVFNDNWKIDLTKTGFTNAAGHCLVMRTQMGKRQVAFVVLDTKGKLSPVGDAN 279

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
            L +           +    K + +Q    ++  IS+
Sbjct: 280 RLRTWL--ETGKVTPLPADAKQYKKQRNQEQIAKISD 314


>gi|189501153|ref|YP_001960623.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium
           phaeobacteroides BS1]
 gi|189496594|gb|ACE05142.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium
           phaeobacteroides BS1]
          Length = 307

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 71/283 (25%), Positives = 125/283 (44%), Gaps = 25/283 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHP 50
           MR   V   +++L   F   S A +   P           Y L D  T  ++        
Sbjct: 1   MRSLRVFALLSLLILAFQPGSYAGSATQPDTLDFEQEINSYILKDIGTSEILMSKNTGKR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             PASLTK++T+ +     K         + I K A+   P+ + F+ G  + L + +K 
Sbjct: 61  IQPASLTKILTSIMAIESGKLG-----DYVVIPKEATVVEPTKAGFQAGERIRLVDLVKA 115

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH---GHYTTA 167
            +V+S+ND A AI+  L  + + F + MN  ++ +G+  ++F N  G  +    GHY+TA
Sbjct: 116 SMVRSSNDAAFAISIYLGGSVQGFARMMNRKARKIGMRNSNFTNPAGFDRDLYAGHYSTA 175

Query: 168 RDMAILSWRIKTDFPQYM-----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           RD+  LS     +               +    K     ++N  +G +  A G+KTG+T 
Sbjct: 176 RDLLRLSEYAIGNEIFNRIAALDSISFFEQNTRKKYTLKSSNKLLGKYQYAVGIKTGYTM 235

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +G  ++A A +G++ ++ V+L A     R  ++  +   GF 
Sbjct: 236 KAGRCLIARAKKGEKDMVLVMLKA--GRKRWALAEQMFEKGFS 276


>gi|302549283|ref|ZP_07301625.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302466901|gb|EFL29994.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 412

 Score =  117 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 15/259 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                        + + D  TG V+A         PAS  K + A  V   L        
Sbjct: 86  TGAPRVPRVSALSWLVADARTGVVLAAYNAHRRLPPASTLKTLFAVTVMPELPAGA--RH 143

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           T             S     +G T  + +  + + + S ND    +AE L    +   + 
Sbjct: 144 TVREDELQGIGEGSSLVGITEGRTYRVADLWRGVFLNSGNDAVHVLAE-LGGGWRTTARR 202

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHYFQIKGLEI 195
           M   +++LG   T  ++  G    G  ++A D+A+       D  F QY    + +    
Sbjct: 203 MQAKARSLGALDTRVVSPDGYDTPGQVSSAFDLAVFGRVGLRDPAFAQYCATVEARFPAG 262

Query: 196 KGKKYPNTN--------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            G  YP  N          V  + G  G+K G+T  +G  +VA+A +  ++L+  ++   
Sbjct: 263 GGWSYPIRNTNRLLSGAPGVKPYRGLIGIKNGYTTHAGNTLVAAARRDGRTLVVTVMNPQ 322

Query: 248 --DRNTRNKVSASLLSMGF 264
               +T  + + SLL  GF
Sbjct: 323 EGGGSTVYEEARSLLDWGF 341


>gi|228923740|ref|ZP_04087018.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835869|gb|EEM81232.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 290

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 107/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +                  Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 26  FTGMIFFSYAQRQQAVRVNQPNITGQYAITIDADTGEILYGKREDERSYPASIAKMMTTL 85

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 86  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 140

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++       
Sbjct: 141 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADAIGNKVSPYDIAMITKEALKYP 200

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 201 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 260

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 261 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 288


>gi|229094119|ref|ZP_04225203.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|228689331|gb|EEL43150.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
          Length = 301

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 8/267 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++   +KE + +  T   I    +E        + G  +  D ALKL+++ SA+ IA +I
Sbjct: 97  LLLENVKENEEITVTENAI---KTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAESI 153

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++         
Sbjct: 154 AEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYPVV 213

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             +    +      ++ PN              A G K+G +    + +V    +  + +
Sbjct: 214 LEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGKRV 273

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYN 266
           I V+L +  R      +  +    F  
Sbjct: 274 INVVL-SSTRKQLYPDTKKMAHYAFQQ 299


>gi|193222252|emb|CAL61007.2| D-alanyl-D-alanine endopeptidase precursor (DD-endopeptidase)
           (Penicillin-binding protein 5) (PBP-5) [Herminiimonas
           arsenicoxydans]
          Length = 308

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 6/252 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                    A         ++D +T  V+ E   +     AS+TKLMT  VV    ++  
Sbjct: 42  IAGLSMTRDALALASSVALVIDQSTSEVLFEKNANVTLPIASITKLMTGLVVVEAQQDMN 101

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
            ML       ++      S+S  + GS ++  N L + ++ S N  A A+        + 
Sbjct: 102 EMLEVTA---EDIDREKNSSSRLRVGSQLSRANMLHIALMSSENRAASALGRHYPGGLRA 158

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV  MN  +K+LG+  TH++++ G+  +   +      ++         +         +
Sbjct: 159 FVATMNAKAKSLGMRGTHYVDSTGLSSNNVASARDLAKLVVEAYNHPILRQYSTDSKYVV 218

Query: 194 EIKGK--KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           E  G+  +Y N+N  V       G  KTG+   +G  +V      ++ ++ + L +  + 
Sbjct: 219 EPGGRALQYANSNRLVTNPDWEIGIQKTGYISEAGRCLVMQTNIKERPIVMIFLDSKGKF 278

Query: 251 TRNKVSASLLSM 262
           +R   +A +   
Sbjct: 279 SRLGDAARIRKW 290


>gi|167837175|ref|ZP_02464058.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 362

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 106/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 101 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVLDSKAP----LTDQ 156

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 157 IDVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYTGGRPAFIAAM 216

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K+LG+S THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 217 NAKAKSLGMSDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTG 274

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 275 KRMLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHSRPIVMVLLDSFGKYSRF 334

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 335 ADASRVRNW 343


>gi|77414953|ref|ZP_00791048.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae 515]
 gi|77158997|gb|EAO70213.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae 515]
          Length = 369

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 69/319 (21%), Positives = 126/319 (39%), Gaps = 30/319 (9%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKG 99
            E   + P   ASLTK+MT Y+V+  +        T + IS    +      +++   + 
Sbjct: 2   YEKDANRPAAIASLTKIMTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRESDASNVPLEK 61

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
              T+   +   ++ SAN  A+A+AE +  TE KFV  M    +  G+  +H +NA G+ 
Sbjct: 62  RRYTVKQLVDAAMISSANSAAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLN 121

Query: 160 Q--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
                            +  +ARD+AI+++ +  ++P  +        +       + N+
Sbjct: 122 NSMLGNHIYPKSSQNDENKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNY 181

Query: 206 AVGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSA 257
            +        G  G+KTG T  +G + +A++ +    L+ VI+ A     D+  R   + 
Sbjct: 182 MLPDMPVFRPGITGLKTGTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATN 241

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
           SLL+           +         +     V +  E+      +      Q K    + 
Sbjct: 242 SLLNYITNTYEPNLVLAKGAT---YKGKEASVRDGKEQSVIAVAKNDLKVAQKKNITKQN 298

Query: 318 SHFIDFEKITLLKNKITKK 336
              I+F+K   L   ITKK
Sbjct: 299 QLKINFKK--ELTAPITKK 315


>gi|297158127|gb|ADI07839.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces bingchenggensis
           BCW-1]
          Length = 430

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 100/295 (33%), Gaps = 25/295 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             ++ +      + + D  +G V+A +       PAS  K++ A  V   + +       
Sbjct: 73  APALPKRLSGLSWMVADAESGDVLAAHNAHWELPPASTLKMLFADTVLPKIPK---DREH 129

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +  S  A     S+    K +     + L L +   + + AV +  ++   + K V+ M
Sbjct: 130 KVAPSDLAGMGAGSSLVGVKENLTYSVHDLWLGVFLRSGNDAVHVLSAMNGGKAKTVEEM 189

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
              ++ L    TH +   G  + G  ++A D+ + +           +            
Sbjct: 190 QAHAEQLNALDTHVVTPDGYDEKGQVSSAYDLTLFARSGLQKADFREYCSTATAQFPGEY 249

Query: 199 K---------------YPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           K                 NTN       V  + G  G+K G+T  +G      A  GD+ 
Sbjct: 250 KKDKKNKGKKKRESFAIQNTNRLLTGFNVPQYKGIAGVKNGYTTHAGSTFTGVAQHGDRV 309

Query: 239 LIAVILGALDRNT--RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
           L+  ++           K +A+L   GF      + +  +++   +   S    +
Sbjct: 310 LLVTVMNPQKEEANEVYKETATLFDWGFKAADKVEPVGSLVRPGPKGLTSGSASD 364


>gi|301629534|ref|XP_002943893.1| PREDICTED: d-alanyl-D-alanine endopeptidase-like [Xenopus
           (Silurana) tropicalis]
          Length = 356

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 10/249 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S   + K     ++D NT  V+           ASLTKLMT  ++          +  
Sbjct: 102 QVSDPLSLKSSVALVIDQNTHEVLLSKNDKAVLPIASLTKLMTGLLISEA----HLSMDE 157

Query: 79  PITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           P+TI+++  +    S S    G+T+T    L L ++ S N  A A+  +       FV  
Sbjct: 158 PLTITQDDVDTEKGSRSRLSVGTTLTRGEMLHLALMSSENRAAHALGRTYPGGLGAFVAR 217

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN  ++ LG++ T ++   G+  H   ++ARD+A L      D                 
Sbjct: 218 MNAKARQLGMTDTRYVEPTGLSSHNQ-SSARDLATLVNVAHGDPLLRELSTSPGYEVAVG 276

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +  ++ NTN  V +     G  KTG+   +G  +V  A    + +I V L +  + +R 
Sbjct: 277 RRTLQFNNTNRLVSSPAWDIGLQKTGYIAEAGRCLVMQAQVAGRQIIMVFLDSAGKFSRL 336

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 337 GDAERVRHW 345


>gi|326802681|ref|YP_004320499.1| serine-type D-Ala-D-Ala carboxypeptidase [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650727|gb|AEA00910.1| serine-type D-Ala-D-Ala carboxypeptidase [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 455

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 120/309 (38%), Gaps = 41/309 (13%)

Query: 9   AMAMLSNIFPFLSIAETNKL-------------PYYTLLDTNTGHVIAENYPDHPWNPAS 55
            +A++    P L+  ET                 +   +D  +G ++ +   D     AS
Sbjct: 16  ILALVFFASPVLASGETVTDFSQQLSQSQQYGFKHAIAIDQESGQILYQKDADDLHGIAS 75

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-----PSNSTFKKGSTMTLDNALKL 110
           LTKL++ YV++  L + K  L   + +S   ++        +       +  ++D  +  
Sbjct: 76  LTKLLSLYVIYDQLAQGKLSLDEAVPVSPALAQQSQVEGLSNVPLVAGPANYSVDQLIDA 135

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------------ 158
           +I+ SAN   VA+AE +  +E  F+  M      LG+   + ++A G+            
Sbjct: 136 VIIASANSATVALAEKVAGSEDHFIDLMAQKLDQLGVDDYNLVSASGLRGELRADARPGQ 195

Query: 159 --VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNWAVGTFL 211
                 +  +A+ +A++  R+  D+P      Q+K    +          N+N  +    
Sbjct: 196 FAESEENRVSAKSLALVVQRLLKDYPDIQSRAQVKEKVFQVAPDWQVTMTNSNQLLPGMT 255

Query: 212 G----ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNK 267
                  G+KTG    +G+ +VA++    + +I V LGA     R   ++ LLS    N 
Sbjct: 256 YGRQDITGLKTGTELGAGYCLVATSFINQRPVILVTLGAESNEDRFLETSRLLSDLQNNL 315

Query: 268 TDRKKINYI 276
                I   
Sbjct: 316 DWVVLIPQG 324


>gi|229082256|ref|ZP_04214719.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228700688|gb|EEL53211.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
          Length = 279

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D NTG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDANTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|154483287|ref|ZP_02025735.1| hypothetical protein EUBVEN_00988 [Eubacterium ventriosum ATCC
           27560]
 gi|149735797|gb|EDM51683.1| hypothetical protein EUBVEN_00988 [Eubacterium ventriosum ATCC
           27560]
          Length = 345

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 98/264 (37%), Gaps = 27/264 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        L++ N+  +  E   D    PAS TKLMTA  V   +K         I   
Sbjct: 83  QAISAKAAILVNVNSKEIYYEKNSDAKMYPASTTKLMTALTVLQNMKTTDI---VTIGSE 139

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES----------------- 126
            N      S + F +G  +T+   L+ L++ S ND A  +A++                 
Sbjct: 140 INMIAADSSKAGFSQGQVVTVQELLEGLLISSGNDAAYVLAKAAGEAILKDNIANEGKTF 199

Query: 127 -LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
              +  ++FV  MN   +++ L  THFM+  G      YT+A D++ ++     +     
Sbjct: 200 TAAQCVERFVYEMNKNVRDMELENTHFMSPDGYDAADQYTSASDLSKIAIEAYNNETIRK 259

Query: 186 HY--FQIKGLEIKGKKYPNT----NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
                  K   +                  +    GMKTG T  +G  +V+ A  GD   
Sbjct: 260 ICGTQSEKSGTLNKTWVSTNALLDKSGQFYYQYCVGMKTGSTGLAGKCLVSVAKNGDTEC 319

Query: 240 IAVILGALDRNTRNKVSASLLSMG 263
           I+V+L       R   +  LL  G
Sbjct: 320 ISVVLNDSTDEQRWTDAKKLLKFG 343


>gi|167570535|ref|ZP_02363409.1| family S11 unassigned peptidase [Burkholderia oklahomensis C6786]
          Length = 363

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 102 TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVVDSKAP----LTDQ 157

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 158 IEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYFPGGRPAFIAAM 217

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 218 NAKAKALGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVDTG 275

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 276 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 335

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 336 ADASRVRNW 344


>gi|167563365|ref|ZP_02356281.1| family S11 unassigned peptidase [Burkholderia oklahomensis EO147]
          Length = 278

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 12/249 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          LT  
Sbjct: 17  TPDSLALRSSVAYVVDQNTSEPLFDKNSHAVVPIASITKLMTAMVVVDSKAP----LTDQ 72

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 73  IEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYFPGGRPAFIAAM 132

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +K LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   
Sbjct: 133 NAKAKALGMTDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVDTG 190

Query: 199 K----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           K    Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R 
Sbjct: 191 KRTLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRF 250

Query: 254 KVSASLLSM 262
             ++ + + 
Sbjct: 251 ADASRVRNW 259


>gi|291544780|emb|CBL17889.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. 18P13]
          Length = 337

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 19/252 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                +  + +     V+AE        PAS+TKLMT  +           + TP    K
Sbjct: 77  EIDSRFAYVWNVTEDRVLAEKNGQERMYPASMTKLMTLLLACESG----IAMDTPYVFDK 132

Query: 85  NA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +          S   F+   T+T  + L   I+ S  D   A+AE +   E  F +HMN 
Sbjct: 133 DMLDPLIAQGASRVGFEPEETVTFADLLYGSILSSGGDATAALAEVVDGDEASFAKHMNR 192

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +++LG+  THF+NA G+    HY+TARD+A+L  +   +               +   +
Sbjct: 193 RAQDLGMFDTHFVNASGLHDDEHYSTARDIALLLEKTLENATCREILSTSVYTTSRNSVH 252

Query: 201 PNTN---------WAVGTFLGA--DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           PN                       G KTGFT  +G+ + + A QG  + I V+ G  ++
Sbjct: 253 PNGMEIRSVVELRMQDYQPEQVKFQGGKTGFTDQAGYCLASFAEQGSDTYIVVVAGGEEK 312

Query: 250 NTRNKVSASLLS 261
           N   + +  L  
Sbjct: 313 NAPTQDTQKLYD 324


>gi|229193289|ref|ZP_04320240.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
 gi|228590266|gb|EEK48134.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 10876]
          Length = 279

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQSVRANQPNITGQYGVTIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 277


>gi|206970320|ref|ZP_03231273.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
 gi|206734897|gb|EDZ52066.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           AH1134]
          Length = 279

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D NTG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDANTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADAIGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|261822173|ref|YP_003260279.1| D-alanyl-D-alanine endopeptidase [Pectobacterium wasabiae WPP163]
 gi|261606186|gb|ACX88672.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pectobacterium
           wasabiae WPP163]
          Length = 315

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 93/252 (36%), Gaps = 10/252 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           +   S  +        ++D    H++  + PD     AS+TKLMTA VV          L
Sbjct: 32  YSAGSAHQEIASGSAMVVDLRDNHILYSSNPDVVVPIASVTKLMTALVVLDA----NLPL 87

Query: 77  TTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              I++      E     S  +  S ++  + L L ++ S N  A ++A       + F+
Sbjct: 88  DEIISVDISQTKEMKGVYSRVRLNSEISRHDMLLLALMSSENRAAASLAHHYPGGYQAFI 147

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI 195
           + MN  +  LG++ T ++   G+  +   T      +L    +      +   Q K    
Sbjct: 148 RAMNAKANALGMTHTRYVEPTGLSINNVSTARDLTKLLIASKQYPLLSQLSTTQEKTATF 207

Query: 196 KGKKY----PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
               Y     NTN  V          KTGFT  +G  +V   +   + +  V+L A  + 
Sbjct: 208 THPAYSLPFRNTNHLVYKADWSIQLTKTGFTNQAGHCLVMRTVINQRPVALVVLDAFGKY 267

Query: 251 TRNKVSASLLSM 262
           T    +  L   
Sbjct: 268 THFADANRLRKW 279


>gi|228961252|ref|ZP_04122872.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798458|gb|EEM45451.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 279

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG V+     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDADTGEVLYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNTRAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRKQLYPDTKKMAHYAFQQ 277


>gi|145535902|ref|XP_001453684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421406|emb|CAK86287.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 12/257 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P +          + +++   G ++A          AS+TK+MT ++   F+      
Sbjct: 138 LSPSIPFGPPITAQSWCIINGKDGSLLAGFNEKFKCQIASITKIMTCFLSLKFVSLISLD 197

Query: 76  LT-TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK-K 133
           L  T  T+ + A     +++  + G  + L + L  L++ S ND AV +  +  +T    
Sbjct: 198 LDNTYFTVPEAAENVGGTSAQLQTGDQLNLRDLLYGLMLPSGNDAAVTLKHNFEQTTGIN 257

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP--------QYM 185
           F+  MN+ +K  GL +T +MN HG+    +Y++A D+ IL ++   +           Y 
Sbjct: 258 FIDEMNSCAKEFGLKSTQYMNPHGLYHKFNYSSALDIGILCFQALQNEHFANIVKTKIYF 317

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                K   IK   + NTN  +    G  G+KTG T  +G  +V   +  + S I V+L 
Sbjct: 318 SEIIDKFGNIKEILWENTNKLL--DNGFQGVKTGQTKEAGPCVVEYYLDNNNSYIIVLLN 375

Query: 246 ALDRNTRNKVSASLLSM 262
               + R   +  LL  
Sbjct: 376 CKSTDYRWYDAIQLLDW 392


>gi|20977191|gb|AAM33319.1|AF503595_3 hypothetical protein [Erwinia chrysanthemi]
          Length = 316

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 97/284 (34%), Gaps = 11/284 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D     V+    PD     AS+TKLMTA VV    +     ++  I+ +
Sbjct: 39  QEIASGSAMVVDLRNNEVLYSANPDVVVPIASVTKLMTAMVVLDANQPLDERISVDISQT 98

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K         S  + GS ++  + L L ++ S N  A ++A       + F+  MN  ++
Sbjct: 99  KE---MKGVYSRVRLGSEISRHDMLLLALMSSENRAAASLAHHYRGGYQAFIAAMNAKAR 155

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
             G + T ++   G+      T      +L    +      +   Q K        Y   
Sbjct: 156 A-GHTHTRYVEPTGLSTSNVSTARDLTKLLIASRQYPLLSQLSTTQEKNAVFTQPSYSLP 214

Query: 201 -PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             NTN  +          KTGFT  +G  +V   +   + +  V+L A  + T    +  
Sbjct: 215 FRNTNHLIYRQDWNIQLTKTGFTNQAGHCLVMRTVINGRPVSLVVLDAFGKFTHFADANR 274

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
           L +           +      + +Q           +V     E
Sbjct: 275 LRNWL--ETGKVSPVPEAALSYKKQKSVASRQPHGADVTAAVDE 316


>gi|5053120|gb|AAD38860.1|AF156692_1 penicillin-binding protein 4 [Neisseria gonorrhoeae]
          Length = 312

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I+P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIYPADTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 108 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 164 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|729291|sp|P39042|DACX_STRSK RecName: Full=D-alanyl-D-alanine carboxypeptidase;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein; Short=PBP; Flags:
           Precursor
 gi|581684|emb|CAA42591.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. K15]
          Length = 291

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 108/279 (38%), Gaps = 24/279 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A   L           T        ++  TG  +     D   +  S TK+MTA VV 
Sbjct: 16  LLAAGTLGATPATAVTKPTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVL 75

Query: 67  SFLKEKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +        L   +TI    S       PS +    G  +T+   L  L++ S  D A A
Sbjct: 76  AQS---NLNLDAKVTIQKAYSDYVVANKPSQAHLIVGDKVTVRQLLYGLMLPSGCDAAYA 132

Query: 123 IAESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +A+      +   +       MN  + NLGL  THF +  G+    +Y+T R +  ++  
Sbjct: 133 LADKYGSGSQAAARVKSFIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRHLTKIAS- 191

Query: 177 IKTDFPQYMHYFQIKGLEIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                  +    + K    K             + NTN  + ++ GA G+KTG    + +
Sbjct: 192 SAMKNSTFRTVVKTKAYTAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKY 251

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +V +A +G +++I  +L +     R   +  +++ GF 
Sbjct: 252 CLVFAATRGGKTVIGTVLASTSIPARESDATKIMNYGFA 290


>gi|291536181|emb|CBL09293.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis M50/1]
 gi|291538955|emb|CBL12066.1| D-alanyl-D-alanine carboxypeptidase [Roseburia intestinalis XB6B4]
          Length = 327

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 22/256 (8%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                  +  T  ++          PAS TK++TAY+   +       L+  +TIS+NA+
Sbjct: 77  AEGAGTFNLATNEIVYAKNIYERLYPASTTKILTAYIALKYCT----DLSQTVTISENAA 132

Query: 88  EY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S      G  + +D+ L  ++++S ND A++IAES+  + ++F   MN  +  L
Sbjct: 133 NQASDSSVCGLHAGDVIRMDDLLYGMMLRSGNDAAISIAESISGSVEEFAALMNKEAAAL 192

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL--------EIKG 197
           G + +HF+N +G+    HYT+  D+ ++      +                      I+ 
Sbjct: 193 GATQSHFVNPNGLPDENHYTSVYDLYLIFRAALQNETFVQIISTTSYDVTYQAGDGTIEE 252

Query: 198 KKYPNTNW----AVGTFLG--ADGMKTGFTCASGFNIV-ASAIQGDQSLIAVILGALDRN 250
             + NTN        +  G    G KTG T A+G+ +V  S  +  Q +I+++L A  ++
Sbjct: 253 HTWENTNQYLSGHAKSPDGFTVIGGKTGTTGAAGYCLVLYSMNEQSQPIISIVLKADGKS 312

Query: 251 TRNKVSASLLSMGFYN 266
               +   +LS GF N
Sbjct: 313 NLYLLMNEMLS-GFAN 327


>gi|38233244|ref|NP_939011.1| putative peptidoglycan synthesis related protein [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38199503|emb|CAE49154.1| Putative peptidoglycan synthesis related protein [Corynebacterium
           diphtheriae]
          Length = 410

 Score =  117 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 12/278 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            TN    + + D +TG VIA   P   + PAS+ K + A V           L+  +TI+
Sbjct: 93  PTNTASAWMVFDLDTGAVIATKDPHGRYRPASVIKALIALVAIDE-----LDLSKKVTIT 147

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +      S   F +G   ++   L  L++ S ND A A+A +L   E   ++ +N+ ++
Sbjct: 148 NDDVNQEGSAVGFVEGIDYSVQQLLDGLLLGSGNDAASALARAL-GGEDTTIKKINDLAQ 206

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGK 198
            LG   T+  +  G+   G  T+ RD+A++      +        +              
Sbjct: 207 ELGTVDTYAASYTGLDAQGMSTSVRDLAVIYQAAWQNPVFADTVKKEYSELPADKTGTTF 266

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSA 257
           +  N N  +       G KTGFT  +    V +     + + AVIL       R  + + 
Sbjct: 267 QVWNDNGILMNTEHGIGGKTGFTDDAHHTFVGAKNINGRRIAAVILDTTIDLGRPWEQAN 326

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
            L+  G+    ++   + + K+    +  ++   +S  
Sbjct: 327 KLIDAGYKVAENQAVGSILRKESSIPSEESQPKELSRP 364


>gi|145219555|ref|YP_001130264.1| Serine-type D-Ala-D-Ala carboxypeptidase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205719|gb|ABP36762.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 311

 Score =  117 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 16/273 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M    VI+  ++        +         Y + D     V      D    PASLTK++
Sbjct: 15  MTAVSVILLFSLFFRAGTADAAVPVLI-DSYIIKDLGYSRVFMSKDSDRLIRPASLTKIL 73

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +     K     L   + I + A+   PS + F+ G  + L + +K  +V S+ND A
Sbjct: 74  TCVLAIESGK-----LDQIVVIPREATLVEPSKAGFRTGDRIRLIDLVKASMVSSSNDAA 128

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---HGHYTTARDMAILSWRI 177
            AIA  L  + K F   MN  ++ +G+  + F N  G       G+ +TA D+ +L+   
Sbjct: 129 FAIAMHLSGSVKGFAAAMNYRARAIGMKHSSFTNPAGFDTGEYSGNLSTAEDLLVLTEYA 188

Query: 178 K-----TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
                  D          +    K       N  +  +  A G+KTGFT  +G  ++A A
Sbjct: 189 IRLPHFNDMAMLGSVIVPEYRTGKMFLLRTHNKLLARYPYAVGIKTGFTRRAGKCLIARA 248

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +  + ++ V+L A     R  ++  +    F 
Sbjct: 249 QKNGRDMLLVMLNARG--DRWGIAEEMFEKAFS 279


>gi|296840908|ref|ZP_06863761.2| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296839544|gb|EFH23482.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 335

 Score =  117 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 71  IEIFAESTIHPTNTQAITSGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 130

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 131 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 186

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+ ++ F    G+    + +TA+D++++         
Sbjct: 187 LGRTYPGGMGAFVAAMNRKAQSLGMYSSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 245

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 246 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 305

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 306 VTIVLLNSPTSATRVNDARKIESW 329


>gi|262402919|ref|ZP_06079479.1| murein-DD-endopeptidase [Vibrio sp. RC586]
 gi|262350418|gb|EEY99551.1| murein-DD-endopeptidase [Vibrio sp. RC586]
          Length = 315

 Score =  117 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 69/318 (21%), Positives = 118/318 (37%), Gaps = 30/318 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFL------------------SIAETNKLPYYTLLDTNTGHVI 42
           M+ F  + ++ ++                            +        ++D  T  VI
Sbjct: 1   MKLFSFLGSVFLICIGSSIAMPTYSADSVTTKAVAKKTVKKQELAANSALVIDLKTNEVI 60

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGST 101
             + PD     AS+TKLMTA V        K  + T + I+ K A E    +S  K GS 
Sbjct: 61  YSSNPDAVKPIASVTKLMTAIVTLDA----KLPMDTKLPITIKEAKEMKGVHSRVKIGSE 116

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++  + L L ++ S N  A ++A       K F++ MN  +K LG+  T F+   G+   
Sbjct: 117 ISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNTKAKALGMKNTRFVEPTGLSPK 176

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGM 216
              +    + +L    K      +   + K +     +Y     NTN  V       D  
Sbjct: 177 NVSSARDLVVLLKASKKYPLLGQLSSTEKKTVTFAKPRYTLDFRNTNRLVFNDNWKIDLT 236

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTGFT A+G  +V     G + +  V+L    + +    +  L +           I   
Sbjct: 237 KTGFTNAAGHCLVMRTQMGKRQVAFVVLDTKGKLSPVGDANRLRTWV--ETGKVTPIPAD 294

Query: 277 IKDFYQQNLSNEVPNISE 294
            K + +Q    ++  IS+
Sbjct: 295 AKQYKKQRSREQIAKISD 312


>gi|229522399|ref|ZP_04411815.1| murein-DD-endopeptidase [Vibrio cholerae TM 11079-80]
 gi|229340384|gb|EEO05390.1| murein-DD-endopeptidase [Vibrio cholerae TM 11079-80]
          Length = 316

 Score =  117 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 121/318 (38%), Gaps = 29/318 (9%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIA--------------ETNKLPYYTLLDTNTGHV 41
           M+ F     +++I  +++  I    + +              +        ++D  T  +
Sbjct: 1   MKIFSRLGHVLLICSSLIIAIPAHSADSSTTTKAGVKKTVKKQELSANSALVIDLKTNEI 60

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           I  N PD     AS+TKLMTA V         A L   I   K+A E    +S  K GS 
Sbjct: 61  IYSNNPDAVKPIASVTKLMTAIVTLDAKLPMDAKLPITI---KDAKEMKGVHSRVKIGSE 117

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++  + L L ++ S N  A ++A       K F++ MN  +K LG+  T F+   G+   
Sbjct: 118 ISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMKNTRFVEPTGLSAK 177

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGM 216
              T    + +L    K      +     K +     +Y     NTN  V       D  
Sbjct: 178 NVSTARDLVVLLKASKKYPLLGKLSATDKKTVTFSKPRYTLDFRNTNRLVHNDNWKIDLT 237

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTGFT A+G  +V     G + +  V+L    + +    +  L +           ++  
Sbjct: 238 KTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGDANRLRTW--IETGKVTPLSSE 295

Query: 277 IKDFYQQNLSNEVPNISE 294
            K + +Q    ++  IS+
Sbjct: 296 PKQYKKQRSQEQIAKISD 313


>gi|317405883|gb|EFV86165.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Achromobacter
           xylosoxidans C54]
          Length = 260

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 92/246 (37%), Gaps = 6/246 (2%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               + A   +     + D  T  VI     +     AS++KLMTA VV    +    ML
Sbjct: 1   MSVRAEAAALRSSTAYVQDLATSTVIFAKNENVVRPIASISKLMTAVVVVDANQPMDEML 60

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                  ++      + S  + G+ ++  + L L ++ S N  A A+          FV 
Sbjct: 61  EITD---EDIDGLKHTTSRLRVGTKLSRGDMLHLALMSSENRAANALGRHYPGGLPAFVA 117

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  +++LG+++THF+   G+      +      +L    +              +EI 
Sbjct: 118 AMNAKAQSLGMTSTHFIEPTGLSSDNVSSPHDLARLLRAASQRPLIHRYSTDTEYDVEIN 177

Query: 197 GKKY--PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            +     NTN  V          KTG+   +G  +V  A    + L  V+L +  + +R 
Sbjct: 178 NRTQTFRNTNLLVRKPDWDIKVSKTGYINEAGECLVMLARINGRDLAIVLLDSQGKLSRI 237

Query: 254 KVSASL 259
             +  +
Sbjct: 238 GDAVRI 243


>gi|240146306|ref|ZP_04744907.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
 gi|257201547|gb|EEU99831.1| serine-type D-Ala-D-Ala carboxypeptidase [Roseburia intestinalis
           L1-82]
          Length = 327

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 22/256 (8%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                  +  T  ++          PAS TK++TAY+   +       L+  +TIS+NA+
Sbjct: 77  AEGAGTFNLATNEIVYAKNIYERLYPASTTKILTAYIALKYCT----DLSQTVTISENAA 132

Query: 88  EY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S      G  + +D+ L  ++++S ND A+AIAES+  + ++F   MN  +  L
Sbjct: 133 NQASDSSVCGLHAGDVIRMDDLLYGMMLRSGNDAAIAIAESISGSVEEFAALMNKEAAAL 192

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL--------EIKG 197
           G + +HF+N +G+    HYT+  D+ ++      +                      I+ 
Sbjct: 193 GATQSHFVNPNGLPDENHYTSVYDLYLIFRAALQNETFVQIISTTSYDVTYQAGDGTIEE 252

Query: 198 KKYPNTNW----AVGTFLG--ADGMKTGFTCASGFNIV-ASAIQGDQSLIAVILGALDRN 250
             + NTN        +  G    G KTG T  +G+ +V  S  +  Q +I+++L A  ++
Sbjct: 253 HTWENTNQYLSGHAKSPDGFTVIGGKTGTTGDAGYCLVLYSMNEQSQPIISIVLKADGKS 312

Query: 251 TRNKVSASLLSMGFYN 266
               +   +LS GF N
Sbjct: 313 NLYLLMNEMLS-GFAN 327


>gi|327485860|gb|AEA80266.1| Murein-DD-endopeptidase [Vibrio cholerae LMA3894-4]
          Length = 316

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 121/318 (38%), Gaps = 29/318 (9%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIA--------------ETNKLPYYTLLDTNTGHV 41
           M+ F     +++I  +++  I    + +              +        ++D  T  +
Sbjct: 1   MKIFSRLGHVLLICSSLIIAIPAHSADSSPTTKAGVKKTVKKQELSANSALVIDLKTNEI 60

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           I  N PD     AS+TKLMTA V         A L   I   K+A E    +S  K GS 
Sbjct: 61  IYSNNPDAVKPIASVTKLMTAIVTLDAKLPMDAKLPITI---KDAKEMKGVHSRVKIGSE 117

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++  + L L ++ S N  A ++A       K F++ MN  +K LG+  T F+   G+   
Sbjct: 118 ISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMKNTRFVEPTGLSAK 177

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGM 216
              T    + +L    K      +     K +     +Y     NTN  V       D  
Sbjct: 178 NVSTARDLVVLLKASKKYPLLGKLSATDKKTVTFSKPRYTLDFRNTNRLVHNDNWKIDLT 237

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTGFT A+G  +V     G + +  V+L    + +    +  L +           ++  
Sbjct: 238 KTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGDANRLRTW--IETGKVTPLSSE 295

Query: 277 IKDFYQQNLSNEVPNISE 294
            K + +Q    ++  IS+
Sbjct: 296 AKQYKKQRSQEQIAKISD 313


>gi|256556949|gb|ACU83571.1| D-alanyl-D-alanine carboxypeptidase [uncultured bacterium
           HF130_AEPn_2]
          Length = 307

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 101/276 (36%), Gaps = 18/276 (6%)

Query: 1   MRQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +R  LV +  A          + + P  +           L+D  T  VI  + PD    
Sbjct: 3   IRLSLVSLFFAFAGTVANASETTLAPRDTSQLHIASGSAMLVDLQTNKVIYASNPDVVVP 62

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLL 111
            AS+TKLMT  VV    +     +   I+I+  +  E     S  K  S M     L + 
Sbjct: 63  IASVTKLMTGMVVLDAKQ----NMDEYISINISDTPEMKGVFSRVKLNSEMPRKEMLLIT 118

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S N  A ++A         F+  MN  +K LG+++T ++   G+  H   T      
Sbjct: 119 LMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMNSTRYVEPTGLSIHNVSTARDLSK 178

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASGF 226
           ++    K      +   + K +  +   Y        +            KTGFT  +G 
Sbjct: 179 LVQAARKYPMLTQLSTTKEKTVSFRKPNYTLGFSNTDHLVNRANWDIKLTKTGFTNQAGH 238

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            +V     G++ +  VIL A  + T    ++ +   
Sbjct: 239 CLVLVTSMGNRPVSLVILDAFGKFTHFADASRIRKW 274


>gi|261392880|emb|CAX50461.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase;
           DD-peptidase; DD-carboxypeptidase) [Neisseria
           meningitidis 8013]
 gi|325203838|gb|ADY99291.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M01-240355]
          Length = 312

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 108 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+ ++ F    G+    + +TA+D++++         
Sbjct: 164 LGRTYPGGMGAFVAAMNRKAQSLGMYSSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|59800773|ref|YP_207485.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae FA
           1090]
 gi|194098057|ref|YP_002001105.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998517|ref|ZP_04718441.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           35/02]
 gi|240013642|ref|ZP_04720555.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           DGI18]
 gi|240016081|ref|ZP_04722621.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           FA6140]
 gi|240080223|ref|ZP_04724766.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           FA19]
 gi|240112436|ref|ZP_04726926.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           MS11]
 gi|240115176|ref|ZP_04729238.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           PID18]
 gi|240117460|ref|ZP_04731522.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           PID1]
 gi|240120712|ref|ZP_04733674.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           PID24-1]
 gi|240123016|ref|ZP_04735972.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           PID332]
 gi|240125268|ref|ZP_04738154.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           SK-92-679]
 gi|254493238|ref|ZP_05106409.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae 1291]
 gi|260441006|ref|ZP_05794822.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           DGI2]
 gi|268594377|ref|ZP_06128544.1| penicillin-binding protein 4 [Neisseria gonorrhoeae 35/02]
 gi|268596373|ref|ZP_06130540.1| penicillin-binding protein 4 [Neisseria gonorrhoeae FA19]
 gi|268598501|ref|ZP_06132668.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae MS11]
 gi|268600854|ref|ZP_06135021.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae PID18]
 gi|268603159|ref|ZP_06137326.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae PID1]
 gi|268681640|ref|ZP_06148502.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae PID332]
 gi|268683868|ref|ZP_06150730.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae SK-92-679]
 gi|291044337|ref|ZP_06570046.1| penicillin-binding protein 4 [Neisseria gonorrhoeae DGI2]
 gi|293399525|ref|ZP_06643678.1| D-alanyl-D-alanine endopeptidase (penicillin binding protein 7)
           [Neisseria gonorrhoeae F62]
 gi|59717668|gb|AAW89073.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae FA
           1090]
 gi|193933347|gb|ACF29171.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512278|gb|EEH61623.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae 1291]
 gi|268547766|gb|EEZ43184.1| penicillin-binding protein 4 [Neisseria gonorrhoeae 35/02]
 gi|268550161|gb|EEZ45180.1| penicillin-binding protein 4 [Neisseria gonorrhoeae FA19]
 gi|268582632|gb|EEZ47308.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae MS11]
 gi|268584985|gb|EEZ49661.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae PID18]
 gi|268587290|gb|EEZ51966.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae PID1]
 gi|268621924|gb|EEZ54324.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae PID332]
 gi|268624152|gb|EEZ56552.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae SK-92-679]
 gi|291011231|gb|EFE03227.1| penicillin-binding protein 4 [Neisseria gonorrhoeae DGI2]
 gi|291610094|gb|EFF39216.1| D-alanyl-D-alanine endopeptidase (penicillin binding protein 7)
           [Neisseria gonorrhoeae F62]
 gi|317163793|gb|ADV07334.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 312

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 107/268 (39%), Gaps = 14/268 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I+P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIYPADTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 108 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 164 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  V+L +    TR   +  + S     
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESWMLQQ 310


>gi|295105683|emb|CBL03227.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 290

 Score =  116 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 12/237 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                +  LLD  +G V+A+   D    PASLTK+MT  +      +    +T P  I  
Sbjct: 32  DTASRHAILLDAQSGRVLAQKRADERTAPASLTKMMTVLLAIETEPDLDKQVTLPEDIFP 91

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F    T+T+ + L   ++ S  +   A+A+ +  +E+ F   MN  +  
Sbjct: 92  ALQTEKASMAGFVPDETVTVRDLLYGAMLPSGAECCEALAQLVSGSEENFAALMNQKAAE 151

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  THF NA G+    HY++A DMA L      +      +           ++P   
Sbjct: 152 LGMKNTHFTNATGLTDTEHYSSAADMAKLLQAALHNTTFRTIFTTEHYTTTATAQHPEGV 211

Query: 205 WAVGTFLG------------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
               T LG             +G KTG+T A+G  + + A    +  I V L A   
Sbjct: 212 SLTSTLLGKLDGTELPTGTRIEGGKTGYTAAAGLCLASLATVNGKEYILVTLAAPGD 268


>gi|170721278|ref|YP_001748966.1| D-alanyl-D-alanine endopeptidase [Pseudomonas putida W619]
 gi|169759281|gb|ACA72597.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pseudomonas
           putida W619]
          Length = 296

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 18/270 (6%)

Query: 8   IAMAMLSNIFPFLSIAET----------NKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +     +      +                     L+D NT   +  ++ D     AS+T
Sbjct: 1   MLTGTATLPSTAAAQPPAQIQRDPSKLHLASGSALLIDLNTNKELYSSHADRVVPIASVT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KLMTA VV         MLT  I  + +        S  + GS +     L + ++ S N
Sbjct: 61  KLMTAMVVLDAKLPMDEMLTMTIANNPD---MKGVYSRVRLGSQLNRRETLLITLMSSEN 117

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
             A ++A         F++ MN  +++LG++ T ++   G+      +      +L    
Sbjct: 118 RAATSLANHYPGGYPAFIKAMNAKARSLGMAHTRYVEPTGLSTQNVSSARDLAKLLMASR 177

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           K      +   + K +  +   Y        +    +       KTGFT  +G  +V   
Sbjct: 178 KYPMLSELSTTREKTVAFRKPNYTLGFRNTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLT 237

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSM 262
              ++ +  VIL A  + T    ++ +   
Sbjct: 238 RMDNRPVAMVILDAFGKYTHFADASRMRQW 267


>gi|50121716|ref|YP_050883.1| D-alanyl-D-alanine endopeptidase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612242|emb|CAG75692.1| penicillin-binding protein [Pectobacterium atrosepticum SCRI1043]
          Length = 315

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/281 (19%), Positives = 100/281 (35%), Gaps = 24/281 (8%)

Query: 2   RQFLVIIAMAMLSNIFP-----FLSIAE---------TNKLPYYTLLDTNTGHVIAENYP 47
           + F + +   ++ +         ++ A                  ++D    HV+  + P
Sbjct: 3   KNFKLSLFGLLILSTHAVMLPQAVAKAPTYSAGNAHQEIASGSAMVVDLRDNHVLYSSNP 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDN 106
           D     AS+TKLMTA VV          L   I++      E     S  +  S ++  +
Sbjct: 63  DVVVPIASVTKLMTALVVLDA----NLPLDEIISVDISQTKEMKGVYSRVRLNSEISRRD 118

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L L ++ S N  A ++A       + F+  MN  ++ LG++ T ++   G+  +   T 
Sbjct: 119 MLLLALMSSENRAAASLAHHYPGGYQAFIHAMNAKARALGMAHTRYVEPTGLSINNVSTA 178

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFT 221
                +L    +      +   Q K        Y     NTN  V          KTGFT
Sbjct: 179 RDLTKLLIASKQYPLLSQLSTTQEKTATFTHPAYSLPFRNTNHLVYKADWSIQLTKTGFT 238

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V   +   + +  V+L A  + T    +  L   
Sbjct: 239 NQAGHCLVMRTVINQRPVALVVLDAFGKYTHFADANRLRKW 279


>gi|296394426|ref|YP_003659310.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Segniliparus
           rotundus DSM 44985]
 gi|296181573|gb|ADG98479.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Segniliparus
           rotundus DSM 44985]
          Length = 289

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 97/235 (41%), Gaps = 6/235 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           + + D +TG V+A       + PAS  K + A VV   L   + +  T        ++  
Sbjct: 48  WLVADLDTGEVLASRDAHGRYRPASTIKTLLAIVVLDELDTAQKVTETDA---DEVADRE 104

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                 + G   ++   L+  ++ S+N  A A+A SL        + MN  +  LG   T
Sbjct: 105 SVVKFIRPGEVRSVYELLEATLMISSNGAANALARSLGGVGAAVAK-MNAEAARLGALDT 163

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
           H     G+   G  T+  D+A+L        P +      +   + G +  N +  +G++
Sbjct: 164 HAATPSGLEAPGASTSPNDLALLFQAAL-RRPDFAAIVGQESAALPGAQLVNRDPLLGSY 222

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            G  G KTGFT  + +N V +A +  + L+  ++         + + +LL  GF 
Sbjct: 223 PGMLGGKTGFTDEAQYNFVGAAARSGRRLVVAVMHNPGSYP-ARQAGALLDWGFE 276


>gi|229112452|ref|ZP_04241990.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
 gi|229130265|ref|ZP_04259224.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|229147556|ref|ZP_04275903.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|228635982|gb|EEK92465.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST24]
 gi|228653198|gb|EEL09077.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-Cer4]
 gi|228671100|gb|EEL26406.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-15]
          Length = 279

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG V+     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDADTGEVLYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNTRAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 190 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 277


>gi|227326961|ref|ZP_03830985.1| D-alanyl-D-alanine endopeptidase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 315

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 10/252 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           +   +  +        ++D    H++  + PD     AS+TKLMTA VV    +    ++
Sbjct: 32  YSAGTAHQEIASGSAMVVDLRDNHILYSSNPDVVVPIASVTKLMTALVVLDANQPLDEII 91

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +  I+ +K         S  +  S ++  + L L ++ S N  A ++A       + F++
Sbjct: 92  SVDISQTKE---MKGVYSRVRLNSEISRRDMLLLALMSSENRAAASLAHHYPGGYQAFIR 148

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIK 191
            MN  ++ LG++ T ++   G+    + +TARD+  L      + +              
Sbjct: 149 AMNAKARALGMAHTRYVEPTGL-SINNVSTARDLTKLLIASKQYPLLGQLSTTQEKTATF 207

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                 + + NTN  V          KTGFT  +G  +V   +   + +  V+L A  + 
Sbjct: 208 SHPAYSQPFRNTNHLVYKADWSIQLTKTGFTNQAGHCLVMRTVINQRPVALVVLDAFGKY 267

Query: 251 TRNKVSASLLSM 262
           T    +  L   
Sbjct: 268 THFADANRLRKW 279


>gi|253687929|ref|YP_003017119.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251754507|gb|ACT12583.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 315

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 100/252 (39%), Gaps = 10/252 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           +   +  +        ++D    H++  + PD     AS+TKLMTA VV    +    ++
Sbjct: 32  YSAGTAHQEIASGSAMVVDLRDNHILYSSNPDVVVPIASVTKLMTALVVLDANQPLDEII 91

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           +  I+ +K         S  +  S ++  + L L ++ S N  A ++A       + F++
Sbjct: 92  SVDISQTKE---MKGVYSRVRLNSEISRRDMLLLALMSSENRAAASLAHHYPGGYQAFIR 148

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIK 191
            MN  ++ LG++ T ++   G+    + +TARD+  L      + + +            
Sbjct: 149 AMNAKARALGMAHTRYVEPTGL-SINNVSTARDLTKLLIASKQYPLLSQLSTTQEKTATF 207

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                   + NTN  V          KTGFT  +G  +V   +   + +  V+L A  + 
Sbjct: 208 SHPAYSLPFRNTNHLVYKADWSIQLTKTGFTNQAGHCLVMRTVINQRPVALVVLDAFGKY 267

Query: 251 TRNKVSASLLSM 262
           T    +  L   
Sbjct: 268 THFADANRLRKW 279


>gi|167756632|ref|ZP_02428759.1| hypothetical protein CLORAM_02169 [Clostridium ramosum DSM 1402]
 gi|167702807|gb|EDS17386.1| hypothetical protein CLORAM_02169 [Clostridium ramosum DSM 1402]
          Length = 342

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 67/319 (21%), Positives = 128/319 (40%), Gaps = 16/319 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++  + + ++++  +      A   +   Y +++ +   VI  +  D+  + AS++K+MT
Sbjct: 6   KKMKLGLIISLMMTLVNTNVSAVPFQGKSYIVMEASHQIVIEGSNQDYIQSVASISKIMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +    ++     L T IT+    ++   S      G  ++L + L  L+++S ND AV
Sbjct: 66  CIIAIENME-----LDTIITVDDTINKAWGSGVYIHIGDKISLRDLLYGLMLRSGNDAAV 120

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKT 179
            IA+++ K   KFV  MN+ +K L L +T F N  G+    +G+ +T  DMA L      
Sbjct: 121 MIAKAVGKEIPKFVDMMNDKAKELQLHSTTFSNPTGLDEEDNGNQSTVYDMARLMAYCHQ 180

Query: 180 DFPQYMHY-FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           +         +    E     + N N  +  +    G KTGFT  +   ++  A + D  
Sbjct: 181 NPIFNEIVSTKEYKREDGNGTWHNKNKLLTNYEYCIGGKTGFTKKARRTLITMARKDDLD 240

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           LI V     +     +         + N    K  +  I +F QQ        +  +V  
Sbjct: 241 LIIVTFNCGND---FEFHQKKFEECYANLKATKIFSKGIVEFKQQQYY-----LDFDVYV 292

Query: 299 TQKEIINYNTQMKEAKDKE 317
            +K        +   +   
Sbjct: 293 NKKPTDKVEVSLNNNEIVI 311


>gi|15601625|ref|NP_233256.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae O1 biovar eltor
           str. N16961]
 gi|121586429|ref|ZP_01676217.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae 2740-80]
 gi|121726497|ref|ZP_01679761.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae V52]
 gi|147672119|ref|YP_001215209.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae O395]
 gi|153216793|ref|ZP_01950617.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae 1587]
 gi|153800546|ref|ZP_01955132.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MZO-3]
 gi|153817027|ref|ZP_01969694.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae NCTC 8457]
 gi|153822999|ref|ZP_01975666.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae B33]
 gi|153825402|ref|ZP_01978069.1| D-alanyl-D-alanine carboxypeptidase family protein [Vibrio cholerae
           MZO-2]
 gi|153828070|ref|ZP_01980737.1| D-alanyl-D-alanine carboxypeptidase family protein [Vibrio cholerae
           623-39]
 gi|227812436|ref|YP_002812446.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae M66-2]
 gi|229505985|ref|ZP_04395494.1| murein-DD-endopeptidase [Vibrio cholerae BX 330286]
 gi|229510158|ref|ZP_04399638.1| murein-DD-endopeptidase [Vibrio cholerae B33]
 gi|229514293|ref|ZP_04403754.1| murein-DD-endopeptidase [Vibrio cholerae TMA 21]
 gi|229517711|ref|ZP_04407156.1| murein-DD-endopeptidase [Vibrio cholerae RC9]
 gi|229526636|ref|ZP_04416040.1| murein-DD-endopeptidase [Vibrio cholerae bv. albensis VL426]
 gi|229528279|ref|ZP_04417670.1| murein-DD-endopeptidase [Vibrio cholerae 12129(1)]
 gi|229605517|ref|YP_002876221.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MJ-1236]
 gi|254224796|ref|ZP_04918412.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae V51]
 gi|254284501|ref|ZP_04959468.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae AM-19226]
 gi|254850028|ref|ZP_05239378.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MO10]
 gi|255746384|ref|ZP_05420331.1| murein-DD-endopeptidase [Vibrio cholera CIRS 101]
 gi|262158262|ref|ZP_06029379.1| murein-DD-endopeptidase [Vibrio cholerae INDRE 91/1]
 gi|262169138|ref|ZP_06036831.1| murein-DD-endopeptidase [Vibrio cholerae RC27]
 gi|262190555|ref|ZP_06048797.1| murein-DD-endopeptidase [Vibrio cholerae CT 5369-93]
 gi|297580128|ref|ZP_06942055.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae RC385]
 gi|298499649|ref|ZP_07009455.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MAK 757]
 gi|9658302|gb|AAF96768.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549407|gb|EAX59436.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae 2740-80]
 gi|121631092|gb|EAX63469.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae V52]
 gi|124114127|gb|EAY32947.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae 1587]
 gi|124123990|gb|EAY42733.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MZO-3]
 gi|125622859|gb|EAZ51177.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae V51]
 gi|126512437|gb|EAZ75031.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae NCTC 8457]
 gi|126519469|gb|EAZ76692.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae B33]
 gi|146314502|gb|ABQ19042.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae O395]
 gi|148876479|gb|EDL74614.1| D-alanyl-D-alanine carboxypeptidase family protein [Vibrio cholerae
           623-39]
 gi|149740948|gb|EDM55025.1| D-alanyl-D-alanine carboxypeptidase family protein [Vibrio cholerae
           MZO-2]
 gi|150425286|gb|EDN17062.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae AM-19226]
 gi|227011578|gb|ACP07789.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae M66-2]
 gi|227015517|gb|ACP11726.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae O395]
 gi|229334641|gb|EEO00127.1| murein-DD-endopeptidase [Vibrio cholerae 12129(1)]
 gi|229336794|gb|EEO01812.1| murein-DD-endopeptidase [Vibrio cholerae bv. albensis VL426]
 gi|229345747|gb|EEO10720.1| murein-DD-endopeptidase [Vibrio cholerae RC9]
 gi|229348273|gb|EEO13231.1| murein-DD-endopeptidase [Vibrio cholerae TMA 21]
 gi|229352603|gb|EEO17543.1| murein-DD-endopeptidase [Vibrio cholerae B33]
 gi|229356336|gb|EEO21254.1| murein-DD-endopeptidase [Vibrio cholerae BX 330286]
 gi|229372003|gb|ACQ62425.1| murein-DD-endopeptidase [Vibrio cholerae MJ-1236]
 gi|254845733|gb|EET24147.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MO10]
 gi|255736138|gb|EET91536.1| murein-DD-endopeptidase [Vibrio cholera CIRS 101]
 gi|262022419|gb|EEY41127.1| murein-DD-endopeptidase [Vibrio cholerae RC27]
 gi|262029944|gb|EEY48591.1| murein-DD-endopeptidase [Vibrio cholerae INDRE 91/1]
 gi|262033566|gb|EEY52062.1| murein-DD-endopeptidase [Vibrio cholerae CT 5369-93]
 gi|297535774|gb|EFH74608.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae RC385]
 gi|297541630|gb|EFH77681.1| D-alanyl-D-alanine endopeptidase [Vibrio cholerae MAK 757]
          Length = 316

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 121/318 (38%), Gaps = 29/318 (9%)

Query: 1   MRQF-----LVIIAMAMLSNIFPFLSIA--------------ETNKLPYYTLLDTNTGHV 41
           M+ F     +++I  +++  I    + +              +        ++D  T  +
Sbjct: 1   MKIFSRLGHVLLICSSLIIAIPAHSADSSTTTKAGVKKTVKKQELSANSALVIDLKTNEI 60

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           I  N PD     AS+TKLMTA V         A L   I   K+A E    +S  K GS 
Sbjct: 61  IYSNNPDAVKPIASVTKLMTAIVTLDAKLPMDAKLPITI---KDAKEMKGVHSRVKIGSE 117

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++  + L L ++ S N  A ++A       K F++ MN  +K LG+  T F+   G+   
Sbjct: 118 ISRKDMLLLTLMSSENRAAASLAHHYPGGYKAFIKAMNAKAKALGMKNTRFVEPTGLSAK 177

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGM 216
              T    + +L    K      +     K +     +Y     NTN  V       D  
Sbjct: 178 NVSTARDLVVLLKASKKYPLLGKLSATDKKTVTFSKPRYTLDFRNTNRLVHNDNWKIDLT 237

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           KTGFT A+G  +V     G + +  V+L    + +    +  L +           ++  
Sbjct: 238 KTGFTNAAGHCLVMRTQMGRRQVAFVVLDTKGKLSPVGDANRLRTW--IETGKVTPLSSE 295

Query: 277 IKDFYQQNLSNEVPNISE 294
            K + +Q    ++  IS+
Sbjct: 296 AKQYKKQRSQEQIAKISD 313


>gi|227486995|ref|ZP_03917311.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227093069|gb|EEI28381.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 402

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 11/249 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            ++    S+ +      + + D +TG + A   P   + PAS+ K++ A V        +
Sbjct: 83  VSVPEGFSLPDGLLAHSFLVFDLDTGDIYAAKDPHGRYRPASIIKVLLASVAID-----R 137

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             LT  + ++  +S+   S++    G   T+D+ L  L++ S ND A AIA+ L   E+ 
Sbjct: 138 LSLTDSMEVTAESSDQEGSSAGIGPGGRYTVDDLLHGLLMASGNDTAHAIAQLLGGDEEA 197

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
             + +N  + +LG + T   +  G+   G  T+A DMA+      +           K  
Sbjct: 198 L-RMVNARALDLGSTDTRVASYSGLDSAGMQTSAYDMALFFTDAWSKPTFREILGTEKYD 256

Query: 194 -----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                +  G +  N N  +     A G KTGFT  +    V +       L AVIL A  
Sbjct: 257 FPGFKDNPGFEMWNDNRMLFVNENALGGKTGFTDDARHTYVGAMNHKGHRLAAVILDAEA 316

Query: 249 RNTRNKVSA 257
              R    A
Sbjct: 317 SKKRAWEMA 325


>gi|240127722|ref|ZP_04740383.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268686110|ref|ZP_06152972.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626394|gb|EEZ58794.1| D-alanyl-D-alanine-endopeptidase [Neisseria gonorrhoeae SK-93-1035]
          Length = 312

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 98/246 (39%), Gaps = 10/246 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +++  TG ++ +   D     AS++KLM+A VV          +   +TI+ +
Sbjct: 70  LSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAMVVLDA----NLDMNETVTITPD 125

Query: 86  ASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +    + S    G+ +T    L L ++ S N    A+  +       FV  MN  +++
Sbjct: 126 EIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHALGRTYPGGMGAFVAAMNRKAQS 185

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK---GLEIKGKKYP 201
           LG+  + F    G+    + +TA+D++++            +          +   + Y 
Sbjct: 186 LGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQIRTNSTSNYASVQTKNGQQNYK 244

Query: 202 NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N+N  V   +   +  KTG+   +G ++V  A   +Q +  V+L +    TR   +  + 
Sbjct: 245 NSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQPVTIVLLNSPTSATRVNDARKIE 304

Query: 261 SMGFYN 266
           S     
Sbjct: 305 SWMLQQ 310


>gi|15894280|ref|NP_347629.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Clostridium acetobutylicum ATCC 824]
 gi|15023901|gb|AAK78969.1|AE007615_3 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Clostridium acetobutylicum ATCC 824]
 gi|325508407|gb|ADZ20043.1| D-alanyl-D-alanine carboxypeptidase (penicilin binding protein)
           [Clostridium acetobutylicum EA 2018]
          Length = 426

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 120/343 (34%), Gaps = 31/343 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK-----EKKAMLTT 78
                     +D  TG VI     D    PAS TKL+T+ ++    K             
Sbjct: 29  PDIAGTSAISIDAKTGEVIYAKNQDAKAFPASTTKLLTSIILNENKKPSDYLYYSESAKE 88

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK---KFV 135
               S + + +P +         +     +      +    A  I +    T++    F 
Sbjct: 89  QPEYSFDKNIHPLNVGEKLPSDVVLKSLLMYSANDMAYVIAANLINKINSPTDEVKKDFS 148

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG--- 192
             MNN  K LGL  THF+  +G+    HY+TA DM+ ++    +           K    
Sbjct: 149 IIMNNEVKKLGLKNTHFVTPNGLHDPDHYSTAYDMSRIAKTAFSINWILKTISTQKTTVT 208

Query: 193 -LEIKGKKYPNTNWAVG-----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
             +    +  NTN  +            G KTG+T  +G  ++    + ++ +I V++ +
Sbjct: 209 LNDGAKPELKNTNKIIDPKEPVYDKTCIGGKTGYTNEAGRCLITIFNRNNKKIIGVVMKS 268

Query: 247 ---LDRNTRNKVSASLLSMGF----------YNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
               D     K   +L++  +                + I Y    ++    + +VP + 
Sbjct: 269 QYDKDDVQVFKDMNNLINYSYSIKPTILYHKNKVYKYEIIKYRPLKYFGYYKTIKVPLVP 328

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
           +E  T  K   N +++ K  +    +  +    T + N   K+
Sbjct: 329 KEDVTYYKNSFN-DSEKKLTEKISINPWNLSTDTAVGNLTLKE 370


>gi|261212871|ref|ZP_05927155.1| murein-DD-endopeptidase [Vibrio sp. RC341]
 gi|260837936|gb|EEX64613.1| murein-DD-endopeptidase [Vibrio sp. RC341]
          Length = 300

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 66/276 (23%), Positives = 106/276 (38%), Gaps = 10/276 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +        ++D  T  VI  + PD     AS+TKLMTA V         A L   I   
Sbjct: 27  QELAANSALVIDLKTNEVIYSSNPDAVKPIASVTKLMTAMVTLDAKLPMDAKLPITI--- 83

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K A E    +S  + GS ++    L L ++ S N  A ++A       K F++ MN  +K
Sbjct: 84  KEAKEMKGVHSRVRIGSEISRKEMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAK 143

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
            LG+  T F+   G+ +    +    + +L    K      +     K +     +Y   
Sbjct: 144 ALGMKNTRFVEPTGLSEQNVSSARDLVLLLKASKKYPMLGQLSSTDKKTVTFAKPRYTLD 203

Query: 201 -PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             NTN  V       D  KTGFT A+G  +V     G + +  V+L    + +    +  
Sbjct: 204 FRNTNRLVHNDNWRIDLTKTGFTNAAGHCLVMRTQMGKRQVAFVVLDTKGKLSPAGDATR 263

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           L +           I    K + +Q    ++  IS+
Sbjct: 264 LRTWL--ETGKVTPIPADAKQYKKQRNQEQIAKISD 297


>gi|330953321|gb|EGH53581.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae Cit 7]
          Length = 311

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 58/281 (20%), Positives = 102/281 (36%), Gaps = 22/281 (7%)

Query: 1   MRQFLVIIAMAMLSN----IFPFLSIAETN----------KLPYYTLLDTNTGHVIAENY 46
           M+  L  + +  +        P L+                     ++D  T  V+  + 
Sbjct: 1   MKIRLSFLGLLFVLTGPVLSTPTLANEPAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           PD     AS+TKLMTA VV    +    ++   I+ +          S  K GS M   +
Sbjct: 61  PDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPE---MKGVFSRVKLGSEMNRRD 117

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L + ++ S N  A ++A S       F+  MN  +K LG+  T ++   G+  +   T 
Sbjct: 118 MLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTA 177

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFT 221
                ++    K      +   + K +  +   Y     NT+  V          KTGFT
Sbjct: 178 RDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFT 237

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V      ++ +  VIL A  + T    ++ +   
Sbjct: 238 NQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKW 278


>gi|110598043|ref|ZP_01386322.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium ferrooxidans
           DSM 13031]
 gi|110340302|gb|EAT58796.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium ferrooxidans
           DSM 13031]
          Length = 486

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 23/275 (8%)

Query: 6   VIIAMAMLSNIFPFLSIAET------NKLP--YYTLLDTNTGHVIAENYPDHPWNPASLT 57
           +       S   P L  AE        + P   Y + D  +  V+     D P +PASLT
Sbjct: 58  ICFFAFTASIALPALLHAEPGNGSYQIQAPVDSYIVKDLCSSRVVMAKDIDRPVSPASLT 117

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K++T  +     K     L   + I++ ++   PS + F+ G  + L + +K  +V S+N
Sbjct: 118 KILTCIMAIESGK-----LDQDVVITRESTNVEPSKAGFRVGERIRLLDLVKAAMVNSSN 172

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---HGHYTTARDMAILS 174
           D A AIA  L  +   FV  MN+ ++ +G+  + F N  G  +    G+ +TA D+  L+
Sbjct: 173 DAAFAIAIHLSGSVDAFVASMNSRARAIGMRNSRFTNPAGFDKGIYAGNTSTAGDLLCLT 232

Query: 175 WRIKTDFPQYM-----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +              ++    K       N  +G +  A G+KTG+T  +G  ++
Sbjct: 233 EYSVRNPVFNAVARLDRAVFVEQSTRKVYSLKTHNKLLGRYPYAVGIKTGYTGRAGRCLI 292

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             AI+ ++ ++ V+L +     R  V+A +     
Sbjct: 293 GRAIKDNRDILLVMLNSRT--DRWNVAAEMFDRAL 325


>gi|104782270|ref|YP_608768.1| D-alanyl-D-alanine endopeptidase [Pseudomonas entomophila L48]
 gi|95111257|emb|CAK15977.1| D-alanyl-D-alanine endopeptidase; penicillin-binding proteins 7 and
           8 [Pseudomonas entomophila L48]
          Length = 308

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/242 (21%), Positives = 90/242 (37%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D NT   +  ++ D     AS+TKLMTA VV         ML+  I  +  
Sbjct: 41  LASGSALLIDLNTNQELYSSHADRVRPIASVTKLMTAMVVLDAKLPMDEMLSMTIANNPE 100

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  + GS +     L + ++ S N  A ++A         F++ MN  +++L
Sbjct: 101 ---MKGVYSRVRLGSELNRRETLLITLMSSENRAANSLANHYPGGYGAFIKAMNAKARSL 157

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G+S T ++   G+      T      +L    K      +   + K +  +   Y     
Sbjct: 158 GMSHTRYVEPTGLSTLNVSTAQDLAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFR 217

Query: 202 -NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              +    +       KTGFT  +G  +V      ++ +  VIL A  + T    ++ + 
Sbjct: 218 NTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILDAYGKYTHFADASRMR 277

Query: 261 SM 262
             
Sbjct: 278 QW 279


>gi|221124426|ref|XP_002164451.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 257

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 10/235 (4%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPP 91
           ++D +T  V+     +     AS+TKLMT  VV       +  +   I I++ +      
Sbjct: 1   MVDQDTKEVLFSKNENAVLPIASITKLMTGVVVSEA----RLSMDETIEITQADVDTEKG 56

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S+S  + G+ ++    L L ++ S N  A A+  +     + FV  MN  ++ LG++ T 
Sbjct: 57  SSSRLRVGTELSRGELLHLALMASENRAAHALGRTFPGGLQHFVGLMNQKARILGMTDTQ 116

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE---IKGKKYPNTNWAVG 208
           ++   G+    + ++A+D+A L     +D                  +  +Y NTN  V 
Sbjct: 117 YVEPTGL-NSRNQSSAKDLATLVNYAYSDATLRELSTSTGYQVEVGNRTLQYNNTNRLVK 175

Query: 209 TFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                 G  KTG+   +G  +V  A    + LI V L +  + TR   +  +   
Sbjct: 176 NPAWEIGLQKTGYITEAGQCLVMQAKIAGRKLIMVFLDSAGKLTRIADAERVRKW 230


>gi|229824659|ref|ZP_04450728.1| hypothetical protein GCWU000282_02006 [Catonella morbi ATCC 51271]
 gi|229786030|gb|EEP22144.1| hypothetical protein GCWU000282_02006 [Catonella morbi ATCC 51271]
          Length = 454

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/393 (13%), Positives = 136/393 (34%), Gaps = 64/393 (16%)

Query: 1   MRQ---FLVIIAM-----AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++   FL   ++     A+ +     +             +D  +G ++ +  P     
Sbjct: 1   MKKRNLFLAFFSLWLGLQALATTAIQAVGTEPNLNAQSAIAVDAASGQILYQKNPMALLE 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNAL 108
             +LTKL++  +++  L ++K  L   +T+S  A      Y  SN   ++    ++   L
Sbjct: 61  VGNLTKLLSLLIIYDALDQEKIHLDDRVTLSDEAYALSQNYEISNVPLRQDLDYSVAELL 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA---------THFMNAHGVV 159
           + + + SAN   +A+AE    ++  F   M    +++   +                 + 
Sbjct: 121 EAVEIGSANGALLALAEYTAGSKAAFQDLMQAKVQSILADSDKINEVDRAEWLALVPELT 180

Query: 160 Q--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQI-----KGLEIKGKKY 200
                            +   A  +A +S+++ +  P+ +   +I     +       + 
Sbjct: 181 NLTGLIEQEEGVASKQQNKLNAIILAAVSYQLVSHHPELLDNTKIDAKLFRQGTDDQFEM 240

Query: 201 PNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
            N+N         +   DG+ +  T   G+  V +  + +  +I + LG  + +     S
Sbjct: 241 HNSNQMLAGQAYEYDQVDGLMSAATAHDGYGTVQTMARDNFRVIVLTLGNSESSQSYHDS 300

Query: 257 ASLLSMGFYNKTDRKKINYI------------------IKDFYQQNLSNEVP--NISEEV 296
             LL   +     ++ I+                    ++ +Y +NL   +P  + +  +
Sbjct: 301 KKLLDYVYGTYQLKRVISTGDSVTQINQLLAHDGEPEQVQAYYGENLDLAIPIVDTTPRI 360

Query: 297 CTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
               +   +  + +    + ++     + I  +
Sbjct: 361 DYLFEPDTSLVSAIDNGWNIQAPQAGGQTIGQV 393


>gi|218767872|ref|YP_002342384.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria meningitidis
           Z2491]
 gi|121051880|emb|CAM08186.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria meningitidis
           Z2491]
 gi|308388939|gb|ADO31259.1| putative D-alanyl-D-alanine-endopeptidase; penicillin-binding
           protein 4 [Neisseria meningitidis alpha710]
 gi|325127864|gb|EGC50770.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis N1568]
 gi|325131795|gb|EGC54495.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M6190]
 gi|325133735|gb|EGC56391.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M13399]
 gi|325136025|gb|EGC58635.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M0579]
 gi|325137845|gb|EGC60420.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis ES14902]
 gi|325144211|gb|EGC66518.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M01-240013]
 gi|325202452|gb|ADY97906.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M01-240149]
 gi|325206406|gb|ADZ01859.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis M04-240196]
 gi|325207796|gb|ADZ03248.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis NZ-05/33]
          Length = 312

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +       + S    G+ +T    L L ++ S N    A
Sbjct: 108 VVLDA----NLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 164 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|304387942|ref|ZP_07370115.1| D-alanyl-D-alanine carboxypeptidase [Neisseria meningitidis ATCC
           13091]
 gi|304338039|gb|EFM04176.1| D-alanyl-D-alanine carboxypeptidase [Neisseria meningitidis ATCC
           13091]
          Length = 316

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 52  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 111

Query: 64  VVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +       + S    G+ +T    L L ++ S N    A
Sbjct: 112 VVLDA----NLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 167

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+ ++ F    G+    + +TA+D++++         
Sbjct: 168 LGRTYPGGMGAFVAAMNRKAQSLGMYSSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 226

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 227 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 286

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 287 VTIVLLNSPTSATRVNDARKIESW 310


>gi|167581319|ref|ZP_02374193.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis TXDOH]
 gi|257138600|ref|ZP_05586862.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
          Length = 364

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          +   
Sbjct: 103 TPDSLALRSSVAYVVDQNTAEPLFDKNSRAVVPIASITKLMTAMVVLDSKAPLTEQIDVT 162

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 163 D---EDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 219

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   K
Sbjct: 220 AKAKSLGMNDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTGK 277

Query: 200 ----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R  
Sbjct: 278 RMLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRFA 337

Query: 255 VSASLLSM 262
            ++ + + 
Sbjct: 338 DASRVRNW 345


>gi|316983735|gb|EFV62716.1| D-alanyl-D-alanine endopeptidase [Neisseria meningitidis H44/76]
 gi|325197971|gb|ADY93427.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis G2136]
          Length = 312

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 108 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 164 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|139438318|ref|ZP_01771871.1| Hypothetical protein COLAER_00860 [Collinsella aerofaciens ATCC
           25986]
 gi|133776515|gb|EBA40335.1| Hypothetical protein COLAER_00860 [Collinsella aerofaciens ATCC
           25986]
          Length = 469

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 125/342 (36%), Gaps = 36/342 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++    G V      D     AS+TK+MTA +     K     +   +T+S
Sbjct: 81  PDIDATNALVM-GKDGTVYYGRGADEQVKIASITKVMTAILTVENCK-----MDEKVTVS 134

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--------KFV 135
             A+    S +   +G  +T++ AL+ L++ S ND A+ +AE + K            FV
Sbjct: 135 NAAATVGNSTAGLLEGDELTVEQALRGLMIPSGNDAAIVLAEYVGKKIDPKTKDAEATFV 194

Query: 136 QHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + MN  +K LG + T F N HG+         ++TA D+A++      +           
Sbjct: 195 KAMNERAKKLGCTGTLFENPHGLDFDEWAGDMHSTAHDVALMMQEAMKNDTIREVVASED 254

Query: 192 GL--------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                               N+ +G   G  G KTG T  +G+   ++  +    +  VI
Sbjct: 255 SWIEVTGADGTDHSHSMDTHNYLLGQ-DGNIGGKTGTTDDAGYCFTSAYNRDGDEIYTVI 313

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD---------FYQQNLSNEVPNISE 294
           L +   + R   +A+L++  + +K      N   K            Q + +++  + + 
Sbjct: 314 LNSTTTDQRFTDTATLVNWYYDHKVTVAIANTQEKTANGNPLMARISQTDWTDKTIDATL 373

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                Q  + +   ++ E    +           + +   K+
Sbjct: 374 ADPAAQATVFSLAGEVTEKVSYDDLSGTVHVGDKVGSVTLKQ 415


>gi|229087522|ref|ZP_04219654.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
 gi|228695769|gb|EEL48622.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
          Length = 273

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 56/269 (20%), Positives = 106/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +                  Y   +D +TG ++          PAS+ K+MT  
Sbjct: 9   FTSMIFFSYAKRQKDVRVNQPAITGKYAITIDADTGEILYGKREQERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +K+        ITI++NA +          + G  +  D ALKL+++ SA+ ++ 
Sbjct: 69  LLLENVKK-----DEEITITENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPVSE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  +++ F++ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 124 SIAEHIAGSKEAFIKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 183

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++  K  N           A G K+G +    + +V       +
Sbjct: 184 IVLDYMNTTRTTLHTSMRSPKIANYGREELYDDPYAIGSKSGLSALGNYTVVTVNEMNGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  RN     +  +    F  
Sbjct: 244 RVINVVL-SSTRNQLYPDTKKMAHYAFEQ 271


>gi|257125213|ref|YP_003163327.1| serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia buccalis
           C-1013-b]
 gi|257049152|gb|ACV38336.1| Serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia buccalis
           C-1013-b]
          Length = 485

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 12/304 (3%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G ++ +         ASLTK+M   V    +    A +   +  + +      S    K 
Sbjct: 145 GKILKDKMSRQQHPIASLTKVMNILVALDQIDRGNAKIDDKVCFTPDTVNMGGSWLNAKA 204

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHG 157
           G   TL + L+  I+ SAN+ A  +A+ + K     FV+ MN  +K LG++ TH+    G
Sbjct: 205 GDCYTLKDLLRAEIIYSANNAAYMVAKHIGKGNLDNFVKLMNQKAKELGMNDTHYYTPAG 264

Query: 158 VVQHGHY-----TTARDMAILSWRIKTDFPQYMHYFQ----IKGLEIKGKKYPNTNWAVG 208
           +           +TA DM +L  R   D        +    ++  E +   Y N N  + 
Sbjct: 265 LPTSMTNKGMDTSTAYDMYLLGRRAIRDERLKAWMKESELVLQNSEGEDVIYNNRNHLLN 324

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            F G  G+KTGF   +G+N++ S+  G+  +I+V LG    + R K      +       
Sbjct: 325 KF-GIYGLKTGFHVQAGYNMIVSSKIGNLEIISVTLGNKSDDARTKDQTQEFTQLEKRMI 383

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
              K    I + ++   + E   I+  + T   +I N N + +    K +      K  +
Sbjct: 384 PVYKAGQEIGNKFRIKGTKE-KKIAGVLSTNVYQIDNTNYKFEVKDLKITTENGISKGDV 442

Query: 329 LKNK 332
           +   
Sbjct: 443 IGKL 446


>gi|226942291|ref|YP_002797364.1| penicillin-binding protein 7 [Azotobacter vinelandii DJ]
 gi|226717218|gb|ACO76389.1| penicillin-binding protein 7 precursor [Azotobacter vinelandii DJ]
          Length = 318

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 107/282 (37%), Gaps = 24/282 (8%)

Query: 1   MRQ---FLVIIAMAMLSNIFPF-----------LSIAETNKLPYYTLLDTNTGHVIAENY 46
           M+    FL ++       + P                         ++D NTG  +  N+
Sbjct: 1   MKTHPSFLALLLACACVVVMPGVQAVDKVPPVRTPPPLELASASALVIDLNTGRELFANH 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           PD     AS++KLMTA V     +     +   I  ++         S  +  S ++   
Sbjct: 61  PDVIVPIASISKLMTAMVTLDARQPLDEAIPVRIHDTREL---RGVYSRVRVNSLISRRE 117

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L+L ++ S N  A ++A +      +FV  MN  ++ L + +T F+   G+    + +T
Sbjct: 118 MLRLALMSSENRAAASLAHNYPGGHARFVAAMNAKARALSMHSTRFVEPTGL-SERNVST 176

Query: 167 ARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGF 220
           ARD+A L      + +  +      +          + + NTN  V       +  KTGF
Sbjct: 177 ARDLAKLLRAARQYPLIRELSTTPSHSAYFQQPRYVQNFNNTNPLVRNPDWRIEVTKTGF 236

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
              +G  +   A+  ++ +  V+L  L +++    +  +   
Sbjct: 237 IDEAGHCLALLAVIQNRPVAMVLLNTLGKHSHVGDANRVRQW 278


>gi|119773214|ref|YP_925954.1| D-alanyl-D-alanine endopeptidase [Shewanella amazonensis SB2B]
 gi|119765714|gb|ABL98284.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella amazonensis SB2B]
          Length = 303

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 106/279 (37%), Gaps = 21/279 (7%)

Query: 1   MRQFLV-----IIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M+  L      ++ + +LS      +        +        L+DT T  V+  + P  
Sbjct: 1   MKSKLFKYISPLLMLGLLSATSAQGAVKSDAKPTQELASYSALLVDTKTNEVLYASNPHQ 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNAL 108
               AS++KLMTA V        K  L   I +  K+  E     S  + GST++   A+
Sbjct: 61  VVPIASISKLMTAMVTLDA----KLPLGEKIAVEVKDNPEMKNVVSRIRLGSTLSRKEAM 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L ++ S N  A  +A       + FV+ MN  +K LG++ T F+   G+  H   T A 
Sbjct: 117 LLTLMSSENRAATTLAHHYPGGYQAFVKAMNAKAKALGMTNTRFVEPTGLSVHNVSTAAD 176

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCA 223
            + +L           +     K +     +Y     NTN  V          KTGFT A
Sbjct: 177 LVKLLKAAQDYPLLGQLSSTPSKSVTFGKPRYSLAFYNTNRLVNKDNWDIRLTKTGFTDA 236

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +G  +V       + +  V+L +  + T    +  L   
Sbjct: 237 AGHCLVMLTKMAKRDVAFVVLDSFGKQTHLGDAGRLKKW 275


>gi|83719638|ref|YP_442398.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
 gi|83653463|gb|ABC37526.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
          Length = 415

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          +   
Sbjct: 154 TPDSLALRSSVAYVVDQNTAEPLFDKNSRAVVPIASITKLMTAMVVLDSKAPLTEQIDVT 213

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 214 D---EDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAMN 270

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   K
Sbjct: 271 AKAKSLGMNDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTGK 328

Query: 200 ----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R  
Sbjct: 329 RMLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRFA 388

Query: 255 VSASLLSM 262
            ++ + + 
Sbjct: 389 DASRVRNW 396


>gi|229175705|ref|ZP_04303213.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
 gi|228607846|gb|EEK65160.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
          Length = 301

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 8/267 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQAVRADQPNITGQYGITIDADTGEILYGKREDERSYPASIGKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++   +KE + +  T   I    +E        + G  +  D ALKL+++ SA+ IA +I
Sbjct: 97  LLLENVKENEEITVTENAI---KTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAESI 153

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+A+++         
Sbjct: 154 AEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAMITKEALKYPVV 213

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             +    +      ++ PN              A G K+G +    + +V    +  + +
Sbjct: 214 LEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGKRV 273

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYN 266
           I V+L +  R      +  +    F  
Sbjct: 274 INVVL-SSTRTQLYPDTKKMAHYAFQQ 299


>gi|282866806|ref|ZP_06275843.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
 gi|282558352|gb|EFB63917.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
          Length = 320

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 20/270 (7%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGH----VIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
                        +    LLD   G     + A    D   + AS TK+MTA VV    +
Sbjct: 53  APATGDQATPDVAIENAFLLDARDGSQERPMWAGTKADESVSMASTTKIMTALVVLQHPE 112

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA------ 124
                +T         +    S +  + G  +T    L  +++ S  D A+A+A      
Sbjct: 113 WLDRQITVKQEYRDYVTANGASTADLQTGDKLTARQLLHAMLIPSGGDAAMALADSFGNG 172

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI------- 177
           ++       F   MN  ++ LGL+ THF +  G+    + +TARD+A L  R        
Sbjct: 173 DTQEARIADFQDQMNTHAQQLGLTGTHFDSFDGISHGDNRSTARDLAKLGQRAMLKPVFA 232

Query: 178 -KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
                 QY           +   +  TN  + T+ GA G+KTG    +G+++V +A + +
Sbjct: 233 DIVKLEQYETEAPAANGRTRYYTWNTTNDLLSTYDGALGVKTGSGSEAGYSLVFAAERDN 292

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           ++L+  I+GA         +A +L  GF +
Sbjct: 293 RTLVGAIVGAD--QEVFADAAKMLDWGFTH 320


>gi|329942386|ref|ZP_08291196.1| D-alanyl-D-alanine carboxypeptidase family protein [Chlamydophila
           psittaci Cal10]
 gi|332287027|ref|YP_004421928.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila psittaci 6BC]
 gi|325506477|gb|ADZ18115.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila psittaci 6BC]
 gi|328815296|gb|EGF85284.1| D-alanyl-D-alanine carboxypeptidase family protein [Chlamydophila
           psittaci Cal10]
          Length = 398

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 119/332 (35%), Gaps = 40/332 (12%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEKKAMLTTPITISKNAS 87
           ++   TG V+     D    PAS+TK+ TA  +         +          +I+  A 
Sbjct: 3   VVHAETGKVLYAKDIDKRIYPASMTKIATALFILKKHPDVLNRFIIVKPDAIASITPQAK 62

Query: 88  EYPPSNSTFKK------------GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           +     S                   ++  +    L++ SAND A A+A +   +  +F+
Sbjct: 63  KQSGYRSPPHWLETDGVTIQLQNKEEVSGWDLFHALLICSANDAANALAIACSGSVVEFM 122

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-------PQYMHYF 188
           + +N+  + +G + THF N HG+    HYTTA D+  +      +               
Sbjct: 123 KQLNDFLREIGCAHTHFNNPHGLHHPNHYTTAGDLTRIMREGLKEPLFRQVIRTTNYKMA 182

Query: 189 QIKGLEIKGKKYPNT---NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                + +     N      +   +  A G KTG T  +G N+V +A +  +S+I +  G
Sbjct: 183 PTNLSQERILNLTNKLILPGSTYYYPPALGGKTGTTKDAGKNLVFAAKKHGRSIITIAAG 242

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
               +   +   +L    F  +  R+ +    + +  +        +  ++       + 
Sbjct: 243 YSVMSELYEDVIALCEGVFNEQPLRRYLIPPTEKYTLR------LGLLGKISIPLPHGVY 296

Query: 306 YNTQMKEAKDKESH-------FIDFEKITLLK 330
           Y+    E ++ ++         +   K  LL 
Sbjct: 297 YDFYASEGEEPKTLSFVPHATKLPIHKGDLLG 328


>gi|254518434|ref|ZP_05130490.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           7_2_43FAA]
 gi|226912183|gb|EEH97384.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           7_2_43FAA]
          Length = 429

 Score =  115 bits (288), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 67/293 (22%), Positives = 113/293 (38%), Gaps = 30/293 (10%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLS----------IAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++   L  +A+A+  ++    +                      +D NTG +I     D
Sbjct: 1   MKKKNLLKSLAVALSISLLAPFANKVSAQETNIQTPEIIGEAAVTMDINTGEIIYSKNAD 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
              +PAS TKLMTA + F+  K K   LT   T+ K       +      G  ++ ++ +
Sbjct: 61  LKLSPASTTKLMTALL-FAENKSKSDTLTFSDTVVKVTETSLNNYKAINPGDKISAEDTM 119

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------VQ 160
           K +++ SAND A  +AES+  T   F+  MN+ +  LGL  THF+N  G+          
Sbjct: 120 KAVMIFSANDTAYLMAESVGGTVDNFINMMNDKAAELGLKNTHFVNPSGLEIDPLNPSNT 179

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL-----EIKGKKYPNTNWAVGTFLGADG 215
             + TTA D+A +      +           G              + N  +G   G  G
Sbjct: 180 EINQTTAYDLAQIGIAAFKNDWVRETMAPKSGEISVSLSGTPIIIESRNKLLGKN-GNIG 238

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGAL---DRNTRNKVSASLLSMGFY 265
            KTG    +G   V    +  + L+ V+L +          + +  L +  + 
Sbjct: 239 GKTGTEEQAGHCFVGFYERDGRDLVTVVLKSEYGATGLNVFEDTEKLANYSYS 291


>gi|161869693|ref|YP_001598860.1| D-alanyl-D-alanine-endopeptidase [Neisseria meningitidis 053442]
 gi|161595246|gb|ABX72906.1| D-alanyl-D-alanine-endopeptidase [Neisseria meningitidis 053442]
          Length = 316

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 52  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 111

Query: 64  VVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +       + S    G+ +T    L L ++ S N    A
Sbjct: 112 VVLDA----NLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 167

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+ ++ F    G+    + +TA+D++++         
Sbjct: 168 LGRTYPGGMGAFVAAMNRKAQSLGMYSSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 226

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 227 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 286

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 287 VTIVLLNSPTSATRVNDARKIESW 310


>gi|310828855|ref|YP_003961212.1| hypothetical protein ELI_3287 [Eubacterium limosum KIST612]
 gi|308740589|gb|ADO38249.1| hypothetical protein ELI_3287 [Eubacterium limosum KIST612]
          Length = 543

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 129/378 (34%), Gaps = 57/378 (15%)

Query: 1   MRQFLVIIAMAMLSNI-----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ ++ +  A+L          + ++          + + N+G V+ E   D  + PAS
Sbjct: 1   MKRKIISVLGALLLVFGGFGSSAWAAMPSFGPDEGVVVFEVNSGDVLVEQNADERYYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIV 113
            TKLMTA     ++      L   +T+          +S    + G   T +  L  L++
Sbjct: 61  TTKLMTALTALDYVGS---SLNDKVTVGDEVKLIGYESSVAHLEVGEIYTWEQLLYALLL 117

Query: 114 KSANDIAVAI------------AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            S ND A  I                 +    FV  MN  ++ +GL  THF NAHG+   
Sbjct: 118 PSGNDAANVIAANIGRKISGNEKMDYNQAMSVFVDQMNAKAQQMGLKNTHFKNAHGLHDP 177

Query: 162 GHYTTARDMAILSWRIKTDFP----QYMHYFQIKGLEIKGKKYPNTNW------------ 205
            HYTT  DMA++     T+      +    +++     + +K+ NT+             
Sbjct: 178 DHYTTPADMAVIGKTAFTNETISKVEGTKVYEMTTNRGEPQKWKNTDMLLYKDAADYGGT 237

Query: 206 -------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR--------- 249
                         A G KTG T  +G   V +A  GD  ++ VI+   ++         
Sbjct: 238 IEEGRTDNPYYNAKAKGGKTGNTDEAGRCFVYNAEDGDAKIVGVIMKGDEKGIFAEASNT 297

Query: 250 -NTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNT 308
            N        LL     +    K    I   +      +     +      + +   Y  
Sbjct: 298 INAAFDD-NRLLDWT-DDSGHYKDFTVINAHYKDGKNLSVKTKEAYSSMIPKGQEDKYTA 355

Query: 309 QMKEAKDKESHFIDFEKI 326
           ++       +      K+
Sbjct: 356 KVSWDTSLLADTDKGLKV 373


>gi|302205612|gb|ADL09954.1| putative peptidoglycan synthesis related protein [Corynebacterium
           pseudotuberculosis C231]
          Length = 404

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 101/276 (36%), Gaps = 14/276 (5%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
               N    + + D + G VIA   P   + PAS+ K + A V           L   + 
Sbjct: 87  NEPANTASAWMVFDLDNGDVIATKDPHGRYRPASVIKALLALVALDE-----LNLKAKVK 141

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           I+   +    S   +  G   T +  L  L++ S ND A A+A+ L    K   + +N  
Sbjct: 142 ITAEDANQEGSAVGYVDGVEYTNEQLLYGLLLNSGNDAAHALAQRLGGDNKTL-EKVNAL 200

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE------I 195
           + +LG   T+  +  G+   G  T+A D+A L +    + P +      + +E       
Sbjct: 201 AHSLGTVDTYAASYSGLDAPGMSTSAHDLA-LIYSHAWENPTFAKMVATEHIELPGNAAT 259

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NK 254
              +  N N          G KTG+T  +    V +     + L AVIL       R  +
Sbjct: 260 PTFQVWNDNGLFLNDEHGIGGKTGYTDDAHHTFVGAKNIDGRRLAAVILDTTVEQGRPWQ 319

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
            +  L+   +      K  N        Q   +E+P
Sbjct: 320 QAQKLIDAAYAVPRGEKVGNLKETSIPSQPSPSELP 355


>gi|315221821|ref|ZP_07863733.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus anginosus
           F0211]
 gi|315189054|gb|EFU22757.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus anginosus
           F0211]
          Length = 444

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 140/367 (38%), Gaps = 48/367 (13%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M   ++P   +   N+     ++D NTG+++ ++  D   +PAS++KLMT Y+VF  +++
Sbjct: 14  MAQKMYPNEKVNPINRPKSSLIVDANTGNILWQDNIDEVRDPASMSKLMTLYLVFEAIQQ 73

Query: 72  KKAMLTTPITISKNA-----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
            K    T I  +             +N           +      +  S     +     
Sbjct: 74  GKLSENTVIKATPRDEAIAKIYEISNNKIVAGVDYTVSELITMTAVPSSNATTVMLANYL 133

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG---------------VVQHGHYTTARDMA 171
                  F+  MN  +K LG++ T + NA G                    + TTARD+A
Sbjct: 134 SNNDPDTFLDMMNAKAKELGMTNTKWFNASGAAAVSFKGLYTPQRYDNNAANQTTARDLA 193

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTC 222
           IL +    ++P  ++Y     + +K        +    +          G DG+KTG + 
Sbjct: 194 ILGYHFVKNYPNILNYTNKPVVTVKKGTPYEETFETYNYSLPGARYAIKGVDGLKTGSSP 253

Query: 223 ASGFNIVASAIQGDQSLIAVILGA------LDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
              FN +A+  +G+Q LI+VI+G            R+    +L+   + +   +K     
Sbjct: 254 QGAFNYIATIKRGEQRLISVIMGVGNWSDQDGEYYRHPFGNALIEKAYADYEYKKFFKAG 313

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA--------KDKESHFIDFEKITL 328
                 Q ++ +  N+S++   T K+       ++          +   S   + + +T 
Sbjct: 314 E-----QTINGKRYNLSKDFYATVKKGTAAKAVVENDVLKNDNGLEQLSSLISNGDNVTE 368

Query: 329 LKNKITK 335
           +KN   K
Sbjct: 369 VKNTAIK 375


>gi|300857885|ref|YP_003782868.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685339|gb|ADK28261.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302330165|gb|ADL20359.1| putative peptidoglycan synthesis related protein [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275848|gb|ADO25747.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis I19]
          Length = 404

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 14/276 (5%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
               N    + + D + G VIA   P   + PAS+ K + A V           L   + 
Sbjct: 87  NEPANTASAWMVFDLDNGDVIATKDPHGRYRPASVIKALLALVALDE-----LNLKAKVK 141

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           I+   +    S   +  G   T +  L  L++ S ND A A+A+ L    K   + +N  
Sbjct: 142 ITAEDANQEGSAVGYVDGVEYTNEQLLYGLLLNSGNDAAHALAQRLGGDNKTL-EKVNAL 200

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE------I 195
           + +LG   T+  +  G+   G  T+A D+A L +      P +      + +E       
Sbjct: 201 AHSLGTVDTYAASYSGLDAPGMSTSAHDLA-LIYSHAWKNPTFAKMVATEHIELPGNAAT 259

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NK 254
              +  N N          G KTG+T  +    V +     + L AVIL       R  +
Sbjct: 260 PTFQVWNDNGLFLNDEHGIGGKTGYTDDAHHTFVGAKNIDGRRLAAVILDTTVEQGRPWQ 319

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
            +  L+   +      K  N        Q   +E+P
Sbjct: 320 QAQKLIDAAYAVPRGEKVGNLKETSIPSQPSPSELP 355


>gi|282600912|ref|ZP_05980106.2| serine-type D-Ala-D-Ala carboxypeptidase family protein
           [Subdoligranulum variabile DSM 15176]
 gi|282570823|gb|EFB76358.1| serine-type D-Ala-D-Ala carboxypeptidase family protein
           [Subdoligranulum variabile DSM 15176]
          Length = 445

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 123/372 (33%), Gaps = 39/372 (10%)

Query: 1   MRQFLVIIAMAMLSNIF-----------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++F  +    +L+ +               + A     P   +++ +T  V+ +   D 
Sbjct: 3   MKRFWALFCTVVLAFVLVLPVAAEGESSALSADAPELTAPAGYVVNLDTNIVVYDKNSDT 62

Query: 50  PWNPASLTKLMTAYVVFSFLKE--KKAMLTTPITISKNAS--EYPPSNSTFKKGSTMTLD 105
               ASLTK+MT  ++    ++      +T P  I           S +  +KG T TL 
Sbjct: 63  QLQAASLTKMMTCLLMLEQYQDQLDTITVTAPSYIYDLIWEKTTNASTADIRKGETQTLR 122

Query: 106 NALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           N L  +++ SAN+ A  +A+ +   +   FV  MNN +  +G + T F +  G+ +    
Sbjct: 123 NLLYAMLLPSANEAAYIVADYMGGGSIDNFVAMMNNEAAAIGCTGTTFADPCGLDERNVT 182

Query: 165 TTARDMAILSWRIKTDFP-------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD--- 214
           T      IL      D          Y      +          NTN  +          
Sbjct: 183 TAKDAYLILRALTAYDIVGTVMGTASYDMGTNDRYTTPGTYIIQNTNKMISNTSYYRAYT 242

Query: 215 -GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT----RNK--VSASLLSMGFYNK 267
            G KTG       N      Q  ++ I+V+L   +       R     + +L+   +   
Sbjct: 243 KGGKTGSLGE-WQNFAGWHSQDGENYISVLLNVPNATDEEGGRPALLETGTLMDWVYATY 301

Query: 268 TDRKKINYIIKDFYQQNLSNEVPNI-----SEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           T    ++        + + +   +      ++++ T            +     +     
Sbjct: 302 TIAPALDTTQPITESRIVYSTQTDTVMLYPADDMMTLLPREGGAALTEQVFNLPDHLTAP 361

Query: 323 FEKITLLKNKIT 334
            ++  ++     
Sbjct: 362 LKQGDVVGTVTL 373


>gi|254556248|ref|YP_003062665.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           JDM1]
 gi|300768351|ref|ZP_07078254.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|254045175|gb|ACT61968.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           JDM1]
 gi|300494078|gb|EFK29243.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
          Length = 412

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 127/342 (37%), Gaps = 38/342 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
               ++  +  N+    + ++ +++    ++D  +G V+     D     ASL+KLMT Y
Sbjct: 15  LTATVSGVLSCNVAAHATSSKADEVKAAYVMDAKSGQVVYAQNADQKLPIASLSKLMTLY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +V   ++  +   T  + I KN  +       S        T T+       +V S+N  
Sbjct: 75  LVERAIEHGQIKWTDAVPIRKNVRKMATSATLSVMPMPAKETFTVRELFAATLVGSSNSG 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----------------HGH 163
           A+A+ E +  +  KF++ MN  +    L    F++A G+                    +
Sbjct: 135 AIALGEYVAGSNDKFIKLMNQQASKWHL-DASFISASGLDNTDLKNYDLKIKGTSDQDQN 193

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMK 217
             +AR +  ++  +   +P  +     + ++I     P +   +            DG+K
Sbjct: 194 LVSARAVTTIAQHLIDAYPDVIQVANQRSVKIHKYTVPTSVEILKGAEYYDPRVPVDGLK 253

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG+T  +G  +VA+  Q    +IA  LG   + T N     +L           K     
Sbjct: 254 TGYTNQAGACLVATYRQNGHRMIATTLGGAWQFTANNNLRLML-----------KTTEQY 302

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           K    ++++ ++P    +V    K         K+   +   
Sbjct: 303 KQVVPKSINYQIPGTQTKVRLVTKYNSKLWVNSKQPITQTKI 344


>gi|75760329|ref|ZP_00740377.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218900160|ref|YP_002448571.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|228903511|ref|ZP_04067635.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
 gi|74492183|gb|EAO55351.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218545764|gb|ACK98158.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           G9842]
 gi|228856132|gb|EEN00668.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
           4222]
          Length = 301

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQAVRADQPKITGQYGVTIDADTGEILYGKREDERSYPASIAKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 97  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 151

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 152 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADAIGNKVSPYDIAIITKEALKYP 211

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 212 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 271

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 272 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 299


>gi|325200563|gb|ADY96018.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis H44/76]
          Length = 272

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 8   IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 67

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 68  VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 123

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 124 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 182

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 183 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 242

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 243 VTIVLLNSPTSATRVNDARKIESW 266


>gi|253682534|ref|ZP_04863331.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum D
           str. 1873]
 gi|253562246|gb|EES91698.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum D
           str. 1873]
          Length = 444

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 79/371 (21%), Positives = 129/371 (34%), Gaps = 43/371 (11%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH-PWNPASLTKLMTAYVVF 66
           I ++  S  F     A +       ++D  TG VI     D  P  PAS TKL+TA ++ 
Sbjct: 14  IFLSFCSTAFATTLNAPSVVGKSAIVVDAKTGEVIYAKNVDTSPMYPASTTKLLTALLLA 73

Query: 67  SFLKEKKA-MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              +       T   +     +         K G  M+ D+A+K L++ SANDIA  IAE
Sbjct: 74  ENKQPTDILTYTDGASKQPEYTLRSFLKGKLKVGDKMSADDAMKGLLLHSANDIAYMIAE 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--HGHYTTARDMAILSWRIKTDFPQ 183
           ++      F + MNN  K LGL+ THF+  +G+      HYT+A D++I+      +   
Sbjct: 134 NVAGNVDNFAKMMNNKIKKLGLTHTHFVTPNGLDNGITNHYTSAYDLSIIGKAAYENEWV 193

Query: 184 YMHYFQIKGL------------------------EIKGKKYPNTNWAVGTFLGADGMKTG 219
                  K                              K   N      +     G KTG
Sbjct: 194 RKTMSLKKDKIELTNGVLGYPENRNKLLGQTLDSNFNSKISINIKNVPVSNAICIGGKTG 253

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNK--------- 267
           +T  +G  +VA   +  + LI V++ +    +        A +++  +  K         
Sbjct: 254 YTSKAGRCLVAMFNKDGRILIGVVMKSAYDKNDTYVFNDMAKIINWAYSEKQVPLYKANT 313

Query: 268 --TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                      +K F      N    + E+V     E     T+ +             K
Sbjct: 314 ELKTLSIKYKPLKFFGPTKTINVPVRVKEDVTYYDNEFNKTETKTEFELPDIGIG-KLSK 372

Query: 326 ITLLKNKITKK 336
              +   + K+
Sbjct: 373 NKSIGKLVLKQ 383


>gi|291087663|ref|ZP_06347077.2| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
 gi|291074391|gb|EFE11755.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. M62/1]
          Length = 341

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 24/272 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A A+                    L +   G V+          PAS+TK+MTA +  
Sbjct: 71  LFASALCVVDGETKDAGTELTAEAGALFNITDGTVLYSKNVFEELYPASITKVMTAILAI 130

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
              +     L+  +T++++A       S    K G T+T++  L  L++ S ND A AIA
Sbjct: 131 EEGE-----LSDEVTVTQDAVITEAGASLAGIKPGDTLTMEQLLYGLMIPSGNDAANAIA 185

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--------- 175
             +  + + F + MN  ++ LG + THF N +G+    HYTTA D+ ++           
Sbjct: 186 VHMSGSLESFAERMNEKARELGATHTHFKNPNGLTDPEHYTTAYDLYLIFNEALKLPKFR 245

Query: 176 -----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                   T   +      +      G  Y N        +   G KTG T A+G+ ++ 
Sbjct: 246 EVIGADSYTASYRDADGNTVSKTWKVGNWYQNGEEKAPQGVTVLGGKTGTTQAAGYCLIM 305

Query: 231 SAIQG--DQSLIAVILGALDRNTRNKVSASLL 260
            A +    +  I+V+L A +R        +++
Sbjct: 306 -AERDESGREYISVVLKAENRQGLYDNMTNII 336


>gi|15676647|ref|NP_273791.1| penicillin-binding protein 4 [Neisseria meningitidis MC58]
 gi|7225978|gb|AAF41162.1| penicillin-binding protein 4 [Neisseria meningitidis MC58]
 gi|325140094|gb|EGC62623.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           meningitidis CU385]
          Length = 312

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 48  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 107

Query: 64  VVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +       + S    G+ +T    L L ++ S N    A
Sbjct: 108 VVLDA----NLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKKLLHLSLMSSENRATHA 163

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 164 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 222

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 223 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 282

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 283 VTIVLLNSPTSATRVNDARKIESW 306


>gi|269213993|ref|ZP_05983348.2| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           cinerea ATCC 14685]
 gi|269144751|gb|EEZ71169.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria
           cinerea ATCC 14685]
          Length = 316

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 100/242 (41%), Gaps = 10/242 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SK 84
                  +++  TG ++ +   D     AS++KLM+A VV          +   ITI + 
Sbjct: 74  LSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAMVVLDA----NLNMDETITITTD 129

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  + S    G+++T    L L ++ S N    A+  +       FV  MN  +++
Sbjct: 130 EIDRIKGTGSRLAIGTSLTRKELLHLSLMSSENRATHALGRTYPGGMGAFVAAMNRKAQS 189

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK---GLEIKGKKYP 201
           LG+ ++ F    G+  + + +TA+D++++           ++          +   + Y 
Sbjct: 190 LGMYSSRFYEPTGL-NYQNVSTAKDLSLMVNAAVQYPQIRINSTSNHAAVQTKNGQQNYK 248

Query: 202 NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N+N  V   +   +  KTG+   +G ++V  A   +Q +  ++L +    TR   +  + 
Sbjct: 249 NSNALVREGMWNIELQKTGYIREAGRSMVVRANIQNQPVTIILLNSPTSATRVNDARKIE 308

Query: 261 SM 262
           S 
Sbjct: 309 SW 310


>gi|289806971|ref|ZP_06537600.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 177

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 6/172 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 6   VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 65

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPS------NSTFKKGSTMTLDNALKLLIVKSAND 118
           V   LK  K  LT  +T+ K+A                K G  +++ +  K +I++S ND
Sbjct: 66  VGQALKAGKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGIIIQSGND 125

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             +A+A+ +  +++ F+  MN  +K LGL+ T F   HG+   G ++TARDM
Sbjct: 126 ACIALADYVAGSQESFIGLMNAYAKRLGLTNTTFQTVHGLDAPGQFSTARDM 177


>gi|145588924|ref|YP_001155521.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047330|gb|ABP33957.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 342

 Score =  115 bits (287), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 8/241 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           + K     +++ +T  V  E  P      AS+TKLMTA VV          L   I I++
Sbjct: 92  SLKSSVAMVVNQDTKEVYFEKNPSVSLPIASITKLMTAMVVLDSK----LPLNETIVINE 147

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                   +     G+ ++ ++AL L ++ S N  A  +  +       FV  MN  +K 
Sbjct: 148 QDVYIYKHSRLAG-GTALSREDALHLALMSSENRAAYTLGRNYPGGIPAFVDAMNRKAKE 206

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ--IKGLEIKGKKYPN 202
           LG+  +HF +  G++     +      +L+   +    +    +      +  + +K+ N
Sbjct: 207 LGMDHSHFADPTGLMSENVSSAEDLTRMLNAAYQYKLIREFSTWPDLTMVIANRPQKFLN 266

Query: 203 TNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           TN  V +     G  KTGF  A+G  +V  A   +  L+ V L ++   +R   +  +  
Sbjct: 267 TNRLVRSGDMDIGLQKTGFINAAGKCLVMQARVNNTPLLLVFLDSVGTQSRFADAVRVRD 326

Query: 262 M 262
            
Sbjct: 327 W 327


>gi|319410119|emb|CBY90455.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase;
           DD-peptidase; DD-carboxypeptidase) [Neisseria
           meningitidis WUE 2594]
          Length = 316

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 52  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 111

Query: 64  VVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +       + S    G+ +T    L L ++ S N    A
Sbjct: 112 VVLDA----NLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 167

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 168 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 226

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 227 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 286

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 287 VTIVLLNSPTSATRVNDARKIESW 310


>gi|91774582|ref|YP_544338.1| murein-DD-endopeptidase [Methylobacillus flagellatus KT]
 gi|91708569|gb|ABE48497.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Methylobacillus flagellatus KT]
          Length = 336

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 61/273 (22%), Positives = 105/273 (38%), Gaps = 18/273 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           R    I + + ++   P +   E            +++  +G V+     D     ASLT
Sbjct: 59  RIISTIRSNSAVATASPSVFKDEDAGLKLASSKAMIVNQESGEVLFAKGTDIAAPIASLT 118

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSA 116
           KLMTA VV    +     +   + I++   +    + S    G+T+T    L+L ++ S 
Sbjct: 119 KLMTAMVVLDAQQ----DMNEKLRITREDIDTLKGTGSRMPIGATLTRAEMLQLALMASE 174

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           N  A A+          FV  MN  +  LG+  + F +  G+    + +TA D+  +   
Sbjct: 175 NRAASALGRHYPGGLNAFVAAMNAKALQLGMLHSRFADPTGL-NSANVSTAEDLVKMVR- 232

Query: 177 IKTDFPQYMHYFQIKGLEIKGK------KYPNTNWAVGTFLGADG-MKTGFTCASGFNIV 229
               +P+  H        +          Y N+N  V       G  KTG+   +G  +V
Sbjct: 233 AAYQYPEIRHVSTTTAYAVPVNGARAPLHYVNSNVLVRNSDWVIGLSKTGYINEAGRCLV 292

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             A  G Q LI V+L +  +N R   +  +   
Sbjct: 293 MQAEVGGQPLIIVLLDSFSKNARVGDAQKIRKW 325


>gi|256827158|ref|YP_003151117.1| D-alanyl-D-alanine carboxypeptidase [Cryptobacterium curtum DSM
           15641]
 gi|256583301|gb|ACU94435.1| D-alanyl-D-alanine carboxypeptidase [Cryptobacterium curtum DSM
           15641]
          Length = 475

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 104/269 (38%), Gaps = 32/269 (11%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                 +  ++  + G    E   D   + AS+TK+MTA             L T IT+S
Sbjct: 67  PNIDAEHAIVV-GSDGTTYFERDADTRVHIASITKVMTAVTAID-----SVPLDTTITVS 120

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE------------ 131
             A+    S +  ++G TM L  ALK L+  S ND A AIAES+                
Sbjct: 121 SQAARIGESTAALQEGDTMPLSEALKALLWPSGNDAAWAIAESIGGMMLTSSNKDASDSS 180

Query: 132 ---KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
              + FV  MN  S +LG++ + + N HG+            A    ++           
Sbjct: 181 ACVQAFVDAMNAKSADLGMNDSIWSNPHGLDDGSWSGDFGSTARDISKLIEYAMSKDAIR 240

Query: 189 QIKGLEIKGKK-----------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
            I   +    K             +T+  +G++ G  G+KTGFT ++G     +    D 
Sbjct: 241 SITSTDGGTCKVLRNGEQVSLSLDSTDELLGSYEGTIGVKTGFTDSAGECFAGAVETSDI 300

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +L +V+L +     R   + +L    F +
Sbjct: 301 TLYSVVLDSTSEKQRFTDTRTLWDWVFNH 329


>gi|329910749|ref|ZP_08275375.1| Penicillin-binding protein precursor
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327546085|gb|EGF31152.1| Penicillin-binding protein precursor
           (D-alanyl-D-alanine-endopeptidase) (DD-endopeptidase)
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 351

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 8/244 (3%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A   K     ++D +   V+ E   +     AS+TKLMT+ VV    +     +   I +
Sbjct: 86  ALDLKSNVALVMDQSNSKVLFEKNSNVALPIASITKLMTSMVVVESNQ----NMDEMIEV 141

Query: 83  -SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            S +      S+S  + GS ++  N L + ++ S N  A A+  +       FV  MN  
Sbjct: 142 TSDDIDREKNSSSRLRVGSILSRSNMLHIALMSSENRAASALGRNYPGGLPAFVGAMNAK 201

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK--K 199
           +K+LG++ T ++++ G+  H   +      ++    +              ++      +
Sbjct: 202 AKSLGMNDTRYVDSTGLSSHNVASAQDLAKLVIAARQHQIIGQYSTDTKYVVKPGSGALQ 261

Query: 200 YPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y N+N  VG      D  KTG+   +G  +V       + ++ V L +  + +R   +  
Sbjct: 262 YSNSNHLVGNPAWDIDLQKTGYINEAGRCMVMLTNIEGRPIVMVFLDSKGKQSRTADAGR 321

Query: 259 LLSM 262
           +   
Sbjct: 322 IRKW 325


>gi|217969517|ref|YP_002354751.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thauera sp.
           MZ1T]
 gi|217506844|gb|ACK53855.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Thauera sp.
           MZ1T]
          Length = 388

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 97/243 (39%), Gaps = 8/243 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + +++  TG V+ E         AS+TKLMTA VV          L+ PI I+
Sbjct: 132 PVLASNAFYVINQRTGEVLLERNATEVLPIASITKLMTAMVVLDAG----LSLSEPIEIN 187

Query: 84  KNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
               +    + S    G+T++ +  L+L ++ S N  A ++A      E  FV  MN  +
Sbjct: 188 DADIDQLKGTGSRLALGTTLSREEMLQLALMSSENRAASSLARHYPGGEAAFVDAMNVKA 247

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP- 201
           + LGL  T F ++ G+      +      +++        +       + + + G+    
Sbjct: 248 RLLGLWNTRFHDSTGLNPANVSSPRDLAKMVAASASYPLIREFSTAHERYVPVHGRMLRF 307

Query: 202 -NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  V +        KTG+   +G  +V       Q ++ V++ +  R TR   +  +
Sbjct: 308 GNTNSLVRSPEWTISVSKTGYISEAGRCLVMQTWLHQQPVVMVLMDSSGRYTRTADAKRV 367

Query: 260 LSM 262
              
Sbjct: 368 RKW 370


>gi|225018364|ref|ZP_03707556.1| hypothetical protein CLOSTMETH_02311 [Clostridium methylpentosum
           DSM 5476]
 gi|224948861|gb|EEG30070.1| hypothetical protein CLOSTMETH_02311 [Clostridium methylpentosum
           DSM 5476]
          Length = 304

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 20/264 (7%)

Query: 5   LVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           L ++   + + + P           + A         L+D  +G V+ E   +    PAS
Sbjct: 20  LALLFCVVHAFVLPKIQQTRTAGTQAEAVQLYSRCAILMDVQSGEVLLEKNSEKRAYPAS 79

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MTA +      +    +     I +       S + F  G  + L + +   ++ S
Sbjct: 80  LTKIMTALIAIEKNSDLNKSVVLDSGIFERLQRENASLAGFAPGEQVRLIDLIYGTLLPS 139

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             + AV++AE    ++K+F++ MN   + L L  T + N  G+      TTA D+A L  
Sbjct: 140 GAEAAVSLAEQTAGSQKEFLKLMNQKGRELKLKRTRYSNVTGLHAKDQITTAADIARLLR 199

Query: 176 RIKTDF---PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG--------ADGMKTGFTCAS 224
               +      ++          +       +  + + +G          G KTGFT  +
Sbjct: 200 YALQNPTFREVFLSQSYTVPPTNRHSDGFTMHSTLFSRMGDASLEKGEILGGKTGFTDQA 259

Query: 225 GFNIVASAIQGDQSLIAVILGALD 248
           G  + + A   D+ LI V L A  
Sbjct: 260 GLCLASLAKYQDRELILVTLDADG 283


>gi|229026472|ref|ZP_04182829.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228734935|gb|EEL85573.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
          Length = 279

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +   +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAHRQQAVRADQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +   I        +  K  N           A G K+G +    + +V    +  +
Sbjct: 190 IVLEYMNSIHTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRTQLYPDTKKMAHYAFKQ 277


>gi|167619401|ref|ZP_02388032.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis Bt4]
          Length = 364

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +   +     ++D NT   + +         AS+TKLMTA VV          +   
Sbjct: 103 TPDSLALRSSVAYVVDQNTAEPLFDKNSRAVVPIASITKLMTAMVVLDSKAPLTEQIDVT 162

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 163 D---EDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRTAFIAAMN 219

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +K+LG++ THF N+ G+    + ++ARD+  +       +P    +   +  E+   K
Sbjct: 220 AKAKSLGMNDTHFENSTGL-SSQNVSSARDLVKM-VNAAYQYPLIRKFSTDRSYEVNTGK 277

Query: 200 ----YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
               Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R  
Sbjct: 278 RMLAYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRFA 337

Query: 255 VSASLLSM 262
            ++ + + 
Sbjct: 338 DASRVRNW 345


>gi|121634547|ref|YP_974792.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria meningitidis
           FAM18]
 gi|120866253|emb|CAM09994.1| putative D-alanyl-D-alanine-endopeptidase [Neisseria meningitidis
           FAM18]
          Length = 316

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 52  IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 111

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 112 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 167

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 168 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 226

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 227 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 286

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 287 VTIVLLNSPTSATRVNDARKIESW 310


>gi|189219530|ref|YP_001940171.1| D-alanyl-D-alanine carboxypeptidase [Methylacidiphilum infernorum
           V4]
 gi|189186388|gb|ACD83573.1| D-alanyl-D-alanine carboxypeptidase [Methylacidiphilum infernorum
           V4]
          Length = 279

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 12/241 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +     + D++    +     D P+ PAS TK+MTA + +   K +     T      
Sbjct: 37  NLQARAALVWDSDQKKDLFSRDADSPYYPASTTKVMTALIAYEKTKLE----GTVSIQPS 92

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +          F  G   ++ + +  L++ S+N+ A+A+A   C T   FV  MN  +K+
Sbjct: 93  DLGLTEYPVVRFFPGEKYSVKSLVYALLLPSSNEAAMALARQSCGTVMSFVDEMNKKAKS 152

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRI-----KTDFPQYMHYFQIKGLEIKGKK 199
           LG + THF N HG+   GH T+A D+  +                  Y          + 
Sbjct: 153 LGCNHTHFQNPHGISYPGHMTSANDLRKIFEAFLAVPDLVKIISSPSYELATLDGKPVQY 212

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             NTN  +  + G    KTG+T  S    V    +  + LI VIL + ++      +  L
Sbjct: 213 LMNTNKLLDLYQGMTAGKTGWTPESRNTFVGMFQRQGKKLIVVILDSPNK---WLDALIL 269

Query: 260 L 260
           L
Sbjct: 270 L 270


>gi|116332941|ref|YP_794468.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
 gi|116098288|gb|ABJ63437.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
          Length = 423

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 30/273 (10%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +                  ++D  +G V+ +   +  +  ASL+KL+T Y+    + + +
Sbjct: 26  TASAAATKTVSKVAARAAYVMDAQSGQVLYQQNANKKYPIASLSKLLTVYLTVKAINDGQ 85

Query: 74  AMLTTPITISKN----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              T  + +S++    +  Y  S+   KKG + T+   +   ++ S+N  A A+ E +  
Sbjct: 86  IKWTDNVPMSQDLLKLSHSYTYSSLRMKKGESFTVRQLVAAAMIASSNSAATALGEYVAG 145

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----------------HYTTARDMAIL 173
           +  KF+Q MN  S++ G+   HF+++ G+                    +  +A+ + ++
Sbjct: 146 SNAKFIQLMNQQSRDWGI-DAHFISSSGLDNTDLKDYHLVLAGTGKKEENLVSAKAITVV 204

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFN 227
           +  +    P            I G K  N N               DG+KTG+T  +   
Sbjct: 205 AQHLLAADPTITAVASKTQATINGTKIYNENSCLPGKSQYKKASHIDGLKTGYTENAKLC 264

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
             A+     Q +IA ILG             L+
Sbjct: 265 FTATYTVNGQRMIATILGGDTT---FSAMNKLI 294


>gi|332284463|ref|YP_004416374.1| putative penicillin-binding protein precursor [Pusillimonas sp.
           T7-7]
 gi|330428416|gb|AEC19750.1| putative penicillin-binding protein precursor [Pusillimonas sp.
           T7-7]
          Length = 355

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 10/248 (4%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              L+   T +     + D ++  V+ +   D     AS++KLMTA VV          +
Sbjct: 99  LAPLTNLATLRAEVAFVQDLDSLDVLYDKNGDEVRPIASISKLMTALVVAEAG----LAM 154

Query: 77  TTPITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              +TIS    +    + +     + ++  + L L ++ S N  A A+          FV
Sbjct: 155 DEMLTISDADVDRLRYSRSRLPVGTELSRADMLHLALMSSENRAAHALGRYYPGGMPAFV 214

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTT---ARDMAILSWRIKTDFPQYMHYFQIKG 192
           + MN+ ++ LG+  T F+   G+      T+    + +   +             +++  
Sbjct: 215 RAMNDKARALGMRNTRFVEPTGLSSDNVSTSRDLVKLLRATTEHKLIHRYTTDDKYKVTV 274

Query: 193 LEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
              +   Y NTN  VG         KTGF   +G  +V       + +  V+L +   ++
Sbjct: 275 GRGRQLVYNNTNRLVGNSKWDIKVSKTGFINEAGECLVMLTRIDQRDVAIVLLNS-TNHS 333

Query: 252 RNKVSASL 259
           R   +  L
Sbjct: 334 RIGDAVRL 341


>gi|91788192|ref|YP_549144.1| murein-DD-endopeptidase [Polaromonas sp. JS666]
 gi|91697417|gb|ABE44246.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Polaromonas sp. JS666]
          Length = 353

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/245 (22%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
               K     ++D +T  V+           ASLTKLMT  ++          +   IT+
Sbjct: 92  PLELKSSVALVIDQDTREVLFSKNDHAVLPIASLTKLMTGVIISGAK----LPMDEMITV 147

Query: 83  SKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +++  +    S+S  + G+T+T    L L ++ S N  A A+  +       FV  MN  
Sbjct: 148 TQDDVDTEKGSSSRLRVGTTLTRGELLHLALMSSENRAAHALGRTYPGGMPTFVNLMNAK 207

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---KGK 198
           +K LG++ T ++   G+      ++A+D+A L      D                  +  
Sbjct: 208 AKMLGMNDTSYVEPTGLSSRNQ-SSAQDLATLVNAAHGDPVLRELSTSTGYQVAVGKRTL 266

Query: 199 KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           +Y NTN  V       G  KTG+   +G  +V       + LI V L +  + +R   + 
Sbjct: 267 QYNNTNRLVKNPDWDIGLQKTGYISEAGQCLVMQTKIAGRKLIMVFLDSAGKLSRLGDAE 326

Query: 258 SLLSM 262
            +   
Sbjct: 327 RVRRW 331


>gi|332530569|ref|ZP_08406506.1| murein-DD-endopeptidase [Hylemonella gracilis ATCC 19624]
 gi|332039975|gb|EGI76364.1| murein-DD-endopeptidase [Hylemonella gracilis ATCC 19624]
          Length = 346

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 97/247 (39%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++   + +     ++D +T  V+     +     ASLTKLMT  ++          L  P
Sbjct: 84  VNDPLSLRSSVAYVIDQDTQEVLFSKNEEAVLPIASLTKLMTTLLISEAE----LPLDEP 139

Query: 80  ITISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           ITI+++  +    + +  + G+ +T    L L ++ S N  A A+  +       FV  M
Sbjct: 140 ITITQDDVDTEKYSVSRLRVGTVLTRGELLHLALMASENRAANALGRTYPGGLSIFVTMM 199

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+  T ++   G+      +      ++         +     +   + +  +
Sbjct: 200 NAKAQLLGMQDTRYVEPTGLSSRNQSSARDLALLVDAASADPMLREFSTTRAYQVAVGQR 259

Query: 199 KYP--NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           K    NTN  V       G  KTG+   +G  +V  A    + LI V L ++ + +R   
Sbjct: 260 KMVFANTNRLVLNQRWDIGLQKTGYISEAGQCLVMQATVAGRKLIMVFLDSVGKLSRLGD 319

Query: 256 SASLLSM 262
           +  +   
Sbjct: 320 AERVRRW 326


>gi|114562029|ref|YP_749542.1| D-alanyl-D-alanine endopeptidase [Shewanella frigidimarina NCIMB
           400]
 gi|114333322|gb|ABI70704.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Shewanella frigidimarina NCIMB 400]
          Length = 302

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 18/277 (6%)

Query: 1   MR-QFLVIIAMAMLSNIFPFLSIAE---------TNKLPYYTLLDTNTGHVIAENYPDHP 50
           M+ +FL   A+   +++   +S A                  L+D  T  V+  + P+ P
Sbjct: 1   MKFRFLFACALLCSTSLSSPMSFAAQAVQNKPQQELASASAMLVDLTTNEVLYSSNPNQP 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS+TKLM A V           ++  IT S             + GS +T +  L L
Sbjct: 61  VPIASVTKLMAAMVTLDAKLALDEKISVKITDSPVMRNIYSRV---RLGSVVTRETMLLL 117

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
            ++ S N  A ++A +     K FV+ MN+ +  LG+S T ++   G+      +    +
Sbjct: 118 TLMSSENRAATSLAHNYPGGFKAFVRAMNDKATALGMSQTRYVEPTGLSPDNVSSANDLI 177

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKY----PNTNWAVGTFLG-ADGMKTGFTCASG 225
            +L           +     K +  +  +Y     NTN  V          KTGFT  +G
Sbjct: 178 LLLKASQTYPLLGKLSSTTKKHVNFESPRYALDFQNTNKLVFKNNWNIALTKTGFTNKAG 237

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +V       + +  V+L +  + T    +  L + 
Sbjct: 238 HCLVMLTEMNKRKVAFVVLDSFGKYTHMADANRLKNW 274


>gi|255066285|ref|ZP_05318140.1| penicilin-binding protein [Neisseria sicca ATCC 29256]
 gi|255049495|gb|EET44959.1| penicilin-binding protein [Neisseria sicca ATCC 29256]
          Length = 313

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 94/246 (38%), Gaps = 10/246 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      + +  TG ++ +   D     AS++KLM+A VV       +  +   IT
Sbjct: 67  AGPLLTSQSALIFNNKTGEILYQKNADRVMPIASISKLMSAMVVLDA----RLDMNERIT 122

Query: 82  I-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           I S        + S    G+T+T    L L ++ S N    A+  +       FV  MN 
Sbjct: 123 ITSDEIDRLKGTGSRLAVGTTLTRGELLHLSLMSSENRATHALGRTYPGGMSAFVAAMNA 182

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---KG 197
            +++LG+ ++ F    G+    + +TA D+  +            +     G        
Sbjct: 183 KAQSLGMHSSRFYEPTGL-NFQNVSTANDLNRMVAAASKYPLIRKNTTSNYGSVWTANGR 241

Query: 198 KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
           + Y N+N  V       +  KTG+   +G ++V  A   +Q +  V+L +    TR   +
Sbjct: 242 QNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPTSTTRVNDA 301

Query: 257 ASLLSM 262
             + S 
Sbjct: 302 RKIESW 307


>gi|326942829|gb|AEA18725.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 280

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D  TG ++     D    PAS+ K+MT  
Sbjct: 16  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDAKTGEILYGKREDERSYPASIAKMMTTL 75

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 76  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 130

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 131 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADAIGNKVSPYDIAIITKEALKYP 190

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 191 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 250

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 251 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 278


>gi|297537475|ref|YP_003673244.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylotenera
           sp. 301]
 gi|297256822|gb|ADI28667.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylotenera
           sp. 301]
          Length = 343

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 97/259 (37%), Gaps = 10/259 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           ++M        S           +++  TG +I     +     AS+TKLMTA V+    
Sbjct: 74  VSMSVPRAYDGSGPLELASSKALVINQLTGEIIYAKNTNQSTPIASVTKLMTAMVMLDA- 132

Query: 70  KEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                 +   + I     +Y   ++S    G+ +T    L+L ++ S N  A A+A +  
Sbjct: 133 ---HLPMDDLLFIGDEDVDYLKRTHSRLNVGTQLTRGELLQLALMSSENRAASALARNYP 189

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS----WRIKTDFPQY 184
                F+  MN  ++ LG+ +T F +A G+  +   T    + +++    +         
Sbjct: 190 GGIGAFMVAMNRKAEVLGMKSTRFYDATGLDSNNVSTAEDLVKMVNAAYHYPEIRQVTTT 249

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V       G  KTGF   +G  +V  A    Q +I V+
Sbjct: 250 ASQEITLYGRENPINFVNTNSLVRGSDWVIGLSKTGFINEAGRCLVMQAEISGQPMIIVL 309

Query: 244 LGALDRNTRNKVSASLLSM 262
           L +  + +R   +  +   
Sbjct: 310 LDSAGKQSRIGDANRIRKW 328


>gi|167033128|ref|YP_001668359.1| D-alanyl-D-alanine endopeptidase [Pseudomonas putida GB-1]
 gi|166859616|gb|ABY98023.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pseudomonas
           putida GB-1]
          Length = 308

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D N+   +  ++ D     AS+TKLMTA VV         MLT  I  +  
Sbjct: 41  LASGSALLIDLNSNQELYSSHADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPE 100

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  + GS +     L + ++ S N  A ++A +       F++ MN  +++L
Sbjct: 101 ---MKGVYSRVRLGSQLDRRETLLITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSL 157

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G++ T ++   G+      T      +L    K      +   + K +  +   Y     
Sbjct: 158 GMAHTRYVEPTGLSTQNVSTARDLAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFR 217

Query: 202 -NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              +    +       KTGFT  +G  +V      ++ +  VIL A  + T    ++ + 
Sbjct: 218 NTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRMR 277

Query: 261 SM 262
             
Sbjct: 278 QW 279


>gi|298369173|ref|ZP_06980491.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298283176|gb|EFI24663.1| D-alanyl-D-alanine carboxypeptidase family protein [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 311

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 98/246 (39%), Gaps = 10/246 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      +++  TG V+ +   +     AS++KLM+A V+          +   +T
Sbjct: 65  AGPLLSSQSALIMNNKTGEVLYQKNANRVMPIASISKLMSAIVLLDAD----LNMNELVT 120

Query: 82  ISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           I+    +    + S    G+++     L L ++ S N    A+A +       FV  MN 
Sbjct: 121 ITPEEIDRLKGTGSRLSIGTSLPRKELLHLSLMSSENRATHALARTYPGGINAFVAAMNA 180

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE---IKG 197
            +++LG+S + F    G+  + + +TA D++ L            +     G        
Sbjct: 181 KAQSLGMSNSRFYEPTGL-DYRNVSTAHDLSRLVAAASKYPLIRRNSTSNYGAVSTASGS 239

Query: 198 KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
           ++Y N+N  V       +  KTG+   +G ++V  A   +Q +  V+L +    TR   +
Sbjct: 240 QRYKNSNALVREGGWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPSSTTRVNDA 299

Query: 257 ASLLSM 262
             + S 
Sbjct: 300 RKIESW 305


>gi|26990499|ref|NP_745924.1| D-alanyl-D-alanine endopeptidase [Pseudomonas putida KT2440]
 gi|24985474|gb|AAN69388.1|AE016575_6 D-alanyl-D-alanine-endopeptidase [Pseudomonas putida KT2440]
          Length = 308

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D N+   +  ++ D     AS+TKLMTA VV         MLT  I  +  
Sbjct: 41  LASGSALLIDLNSNQELYSSHADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPE 100

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  + GS +     L + ++ S N  A ++A +       F++ MN  +++L
Sbjct: 101 ---MKGVYSRVRLGSQLDRRETLLITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSL 157

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G++ T ++   G+      T      +L    K      +   + K +  +   Y     
Sbjct: 158 GMAHTRYVEPTGLSTQNVSTARDLAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFR 217

Query: 202 -NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              +    +       KTGFT  +G  +V      ++ +  VIL A  + T    ++ + 
Sbjct: 218 NTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRMR 277

Query: 261 SM 262
             
Sbjct: 278 QW 279


>gi|116493443|ref|YP_805178.1| D-alanyl-D-alanine carboxypeptidase [Pediococcus pentosaceus ATCC
           25745]
 gi|116103593|gb|ABJ68736.1| D-alanyl-D-alanine carboxypeptidase [Pediococcus pentosaceus ATCC
           25745]
          Length = 418

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 132/371 (35%), Gaps = 46/371 (12%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-----------NKLPYYTLLDTNTGHVIAENYPD 48
           M++   ++IA  M+   F     AE                    +D NTG ++     +
Sbjct: 1   MKKLYTMLIAFLMMMTSFAPALAAENNESVIEATTSNITAKSAIAVDENTGQILYSKDEN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS++K++ AY++   +KE +      ++I+K+  E   ++       +      +
Sbjct: 61  TVRPIASMSKIVAAYLIMKSVKEGQMHWNQKVSINKSLEEVSNNSELTNVPLSSNQTYTV 120

Query: 109 KLLIVKSANDIAV----AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
           + L+  S    A     ++ ++   T +KFV  M +T K  G+      NA G+      
Sbjct: 121 RNLLDASLIYSANAAILSLGKAQAGTSEKFVNEMRSTVKKWGIKDAKLYNAAGLLESQVG 180

Query: 159 --------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTN-- 204
                       +  +A+DMAI+   +  +FP+ ++  +I+       K      N N  
Sbjct: 181 SEKYPGTSGNIENEMSAKDMAIVISHVLKEFPEILNITKIQKTTFNTGKEELEITNHNEL 240

Query: 205 -WAVGTFL---GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
                 +      DG+KTG +  +G +  A+       +I+V+LG+   N R   + ++ 
Sbjct: 241 LKGAEQYEAKYQIDGLKTGTSDKAGEDFSATGKIKGHRVISVVLGS-GENQRFTDTKTIW 299

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS----EEVCTTQKEIINYNTQ-MKEAKD 315
           +                      +       +      +    + +    +   +K    
Sbjct: 300 NALMTKLAVLSSNLKNQASVKINSAKVADVKLELTQPLDYWVPKGQSEKLHVNAIKLNDP 359

Query: 316 KESHFIDFEKI 326
           K+   I   K+
Sbjct: 360 KQKAPIKHSKV 370


>gi|319944125|ref|ZP_08018403.1| D-alanyl-D-alanine endopeptidase PbpG [Lautropia mirabilis ATCC
           51599]
 gi|319742619|gb|EFV95028.1| D-alanyl-D-alanine endopeptidase PbpG [Lautropia mirabilis ATCC
           51599]
          Length = 454

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 8/244 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +      +     ++D   G ++ +         ASLTKLMTA VV          L   
Sbjct: 209 IPDPLALRSSVALVVDPRNGKILYDKNSSAVLPIASLTKLMTAMVVLD----GGQPLDEK 264

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I I  ++      S S    G+ +T    ++L ++ S N  A A+A S       FV   
Sbjct: 265 IRIEAEDRDTERYSTSHLPVGTELTRAELMQLALMSSENRAAHALARSYPGGVTAFVAAA 324

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE--IK 196
           N  ++ +G+  + F++  G+      T      +++   +    +         +     
Sbjct: 325 NRKAREIGMWDSVFLDPTGLSASNVSTARDLALLVARSARYPEIRRFSVASQLQVRTAYG 384

Query: 197 GKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
            + +  TN  VG         KTGF   +G  +V  A    + +I V+L +  R +R   
Sbjct: 385 TRVFHTTNPLVGNQQWGLTVQKTGFINEAGNCVVMQARVNGRQMIIVLLDSQGRYSRVAD 444

Query: 256 SASL 259
           +  +
Sbjct: 445 ANRI 448


>gi|148547200|ref|YP_001267302.1| D-alanyl-D-alanine endopeptidase [Pseudomonas putida F1]
 gi|148511258|gb|ABQ78118.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Pseudomonas
           putida F1]
          Length = 308

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D N+   +  ++ D     AS+TKLMTA VV         MLT  I  +  
Sbjct: 41  LASGSALLIDLNSNQELYSSHADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPE 100

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  + GS +     L + ++ S N  A ++A +       F++ MN  +++L
Sbjct: 101 ---MKGVYSRVRLGSQLDRRETLLITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSL 157

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G++ T ++   G+      T      +L    K      +   + K +  +   Y     
Sbjct: 158 GMAHTRYVEPTGLSTQNVSTARDLAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFR 217

Query: 202 -NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              +    +       KTGFT  +G  +V      ++ +  VIL A  + T    ++ + 
Sbjct: 218 NTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRMR 277

Query: 261 SM 262
             
Sbjct: 278 QW 279


>gi|152980485|ref|YP_001353523.1| D-alanyl-D-alanine carboxyopeptidase [Janthinobacterium sp.
           Marseille]
 gi|151280562|gb|ABR88972.1| D-alanyl-D-alanine carboxyopeptidase [Janthinobacterium sp.
           Marseille]
          Length = 274

 Score =  115 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 8/255 (3%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + +++      + A      +  ++D  TG V+ E         ASLTKLMTA VV   
Sbjct: 5   ILFVVAITAASSAFATPVGSKHAIVIDEGTGQVVFEKNATDIVPIASLTKLMTAMVVLDA 64

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGS-TMTLDNALKLLIVKSANDIAVAIAESL 127
                  +   I+I+++  +    +S+        +    L+L ++ S N  A A+A S 
Sbjct: 65  KP----DMHERISITEDDVDTLKFSSSRVPVGAVFSRHELLELALMSSDNRAAHALARSY 120

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
               + F   + + +  L L  T+     G+  +   T +    +     K    + +  
Sbjct: 121 PGGLEHFKVAVRSKAHMLNLRRTNIEEPTGLSPYNTSTASDLAKLALAASKYPDIERITT 180

Query: 188 FQIKGLEIK--GKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                +++    ++Y NTN  VG         KTG+T  +G  I+       +  I V+L
Sbjct: 181 VSNDLIDVNGRMRQYHNTNRLVGDKNWTISLSKTGYTQEAGRCIIMRVHAAGRDAIMVLL 240

Query: 245 GALDRNTRNKVSASL 259
            A     R   +  L
Sbjct: 241 NARGNANRTADANYL 255


>gi|294670433|ref|ZP_06735315.1| hypothetical protein NEIELOOT_02152 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307897|gb|EFE49140.1| hypothetical protein NEIELOOT_02152 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 313

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 11/250 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                         +++  TG V+ +   +     AS++KLM+A VV       +  +  
Sbjct: 63  AAIAGPLLSSQAALIVNNRTGEVLYQKNMNRVMPIASISKLMSAMVVLDA----RLNMNE 118

Query: 79  PITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI+++  +    + S    G+ +T    L L ++ S N    A+  +       FV  
Sbjct: 119 VITITEDEIDRLKGTGSRLSVGTQLTRAQLLHLSLMSSENRATHALGRTYPGGMSAFVAA 178

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN  +++LG++ + F    G+  + + +TA D+  L+       P   +     G     
Sbjct: 179 MNAKAQSLGMTNSRFYEPTGL-DYRNVSTAWDLNKLAAAASNYAPITKNSTATYGSVYTS 237

Query: 196 --KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
             + + Y NTN  V       +  KTG+   SG ++V  A  G + +  V+L +    TR
Sbjct: 238 AGRQQNYKNTNALVREGTWDIELQKTGYIRESGRSMVVRARIGREPVTIVLLNSPTSTTR 297

Query: 253 NKVSASLLSM 262
              +  + S 
Sbjct: 298 VNDARKIQSW 307


>gi|238028027|ref|YP_002912258.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           glumae BGR1]
 gi|237877221|gb|ACR29554.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           glumae BGR1]
          Length = 379

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S A   +     ++D  T   + +         AS++KLMTA VV          L   
Sbjct: 118 TSDALALRSSVAYVVDQATSEPLFDKNSRAVVPIASISKLMTAMVVLDSKAP----LEEQ 173

Query: 80  ITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++  +      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 174 IEVTDADRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 233

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +K LG++ THF N+ G+    + ++ARD+  +                         
Sbjct: 234 NAKAKALGMTDTHFENSTGLTSL-NVSSARDLVKMIDAAYQYPLIRRFSTDRTYTVFTGK 292

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  V       G  KTGF   +G  +V  A    + ++ V+L +  + +R  
Sbjct: 293 RSLVYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQATIHGRPIVMVLLDSFGKYSRTA 352

Query: 255 VSASLLSM 262
            +A + + 
Sbjct: 353 DAARVRNW 360


>gi|322389162|ref|ZP_08062723.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 903]
 gi|321144067|gb|EFX39484.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 903]
          Length = 452

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 135/357 (37%), Gaps = 57/357 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           ++++L+ I + +     P L+ A+                   +     ++D NTG+V+ 
Sbjct: 2   IKKYLIHICLLLSLLCQPILASADELVDMAQKMYPNDNVQAINRPHSSLIIDGNTGNVLW 61

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKK 98
           ++  D   +PAS++KLMT Y++F  +   K    T I  + +           +N+    
Sbjct: 62  KDNIDEVRDPASMSKLMTLYLLFEDMANGKISKDTVIKATASDQAIGKIYEISNNNIVAG 121

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 +     ++  S     +            F++ MN  +K LG++ T + N  G 
Sbjct: 122 VDYTIPELITMTVVPSSNVSTLMLANLMSNNDPDAFIERMNAKAKELGMTNTVWNNPSGA 181

Query: 159 V---------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+ IL +     +P  ++Y     + +K       
Sbjct: 182 AISTLQGYYQVNNYPNDAANQTTARDLGILVYHFINQYPDILNYTNQAQVTVKKGTPYEE 241

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DG+KTG +    FN +A+  +G+Q LIAVI+G  D      
Sbjct: 242 TFDTYNYSLPGAKYALKGVDGLKTGSSPRGAFNYIATIKRGNQRLIAVIMGVGDWADQDG 301

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
              R+    +L+   + +   +K ++  +     Q +  +   + +    T K+   
Sbjct: 302 EYYRHPFGNALIEKAYKDFGYKKLLDAGV-----QKIDGKTYTLEKPFYATVKKGAK 353


>gi|302544682|ref|ZP_07297024.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302462300|gb|EFL25393.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 309

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 30/293 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR+   +  +A  S +            + A T       +++  TG  + +   D   +
Sbjct: 20  MRRLSALSVLAAGSVLASGAFVPAQAATAAAPTIAAKGGYVMNNGTGKDLYKKAADTRLS 79

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-----PPSNSTFKKGSTMTLDNA 107
             S TK+MTA VV +        L + +TI K  S+Y       S++    G  +T+   
Sbjct: 80  TGSTTKIMTARVVLAQP---NLNLNSKVTIQKAYSDYIVDNNWASSARLIVGDKVTVRQL 136

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQH 161
           L  L++ S  D A A+A+       +  +       MN+T+K+LGL  T+F +  G+   
Sbjct: 137 LYGLMLPSGCDAAYALADKFGSGSTRAARVKSFIGKMNSTAKSLGLKNTNFDSFDGIGHG 196

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE--------IKGKKYPNTNWAVGTFLGA 213
            +Y+T RD+  L+                K  +         +   + NTN  +GT+ GA
Sbjct: 197 KNYSTPRDLTKLASSAMKYSTFRSVVKTKKTTQKTVTKSGGYRNMTWENTNPLLGTYSGA 256

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            G+KTG    + + +V +A +  +++I  +L +    TR   +  LL+ GF  
Sbjct: 257 IGVKTGSGPEAKYCLVFAATRSGKTVIGTVLASSSVATRTSDAKKLLNYGFKK 309


>gi|302552772|ref|ZP_07305114.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302470390|gb|EFL33483.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 277

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 23/280 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A   L+      + A         +++  TG  +     D   +  S TK+MTA VV 
Sbjct: 1   MLATGALTVAPAQAASAPAIAAKGGFVMNNATGKSLYTKAADTRRSTGSTTKIMTALVVL 60

Query: 67  SFLKEKKAMLTTPITISKNASEY-----PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
                    L + +T+ K  S+Y       SN+    G  +T+   L  L++ S  D A 
Sbjct: 61  KQS---NLNLDSKVTVQKAYSDYIVENNWASNAKLIVGDKVTVRQLLYGLMLPSGCDAAY 117

Query: 122 AIAESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           A+A+       +  +       MN+T+K+LGLS THF +  G+ +  +Y+T RD+  ++ 
Sbjct: 118 ALADKFGSGSTRAARVKSFIGKMNSTAKSLGLSNTHFDSFDGIGKGSNYSTPRDLTKIAS 177

Query: 176 RIKTDFPQYM---------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
               +                    G       + NTN  + ++ GA G+KTG    + +
Sbjct: 178 AAMKNSTFRTVVKTKKYTAKTTTKSGGTRTMAPWENTNPLLSSYSGAIGVKTGSGPEAKY 237

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +V +A +  +++I  +L + + +TR   +  LL+ GF  
Sbjct: 238 CLVFAATRNGKTVIGTVLASTNLDTRKSDATKLLNYGFTK 277


>gi|228942179|ref|ZP_04104719.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975108|ref|ZP_04135667.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981748|ref|ZP_04142043.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228777860|gb|EEM26132.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228784629|gb|EEM32649.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817513|gb|EEM63598.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 301

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D  TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQAVRADQPNITGQYGVTIDAKTGEILYGKREDERSYPASIAKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 97  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 151

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 152 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADAIGNKVSPYDIAIITKEALKYP 211

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 212 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 271

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 272 RVINVVL-SSTRAQLYPDTKKMAHYAFQQ 299


>gi|294630405|ref|ZP_06708965.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
 gi|292833738|gb|EFF92087.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
          Length = 283

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 22/279 (7%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++A   L+ +      A +       +++   G  +     D   +  S TK+MTA VV 
Sbjct: 6   VLATGALTAMPAQAVSAPSIVAKGGYVMNNANGSSLYTKAADTKLSTGSTTKIMTAKVVL 65

Query: 67  SFLKEKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
               +K   L   +TI    S    +   S +    G  +T+   L  L++ S  D A A
Sbjct: 66  ---SQKNLNLDAKVTIQKAYSDYVVKNNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYA 122

Query: 123 IAE------SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +A+      ++    K F+  MN  +K+L L  THF +  G+    +Y+T RD+  ++  
Sbjct: 123 LADKYGTGSTMSARVKSFIGKMNTAAKDLKLKNTHFDSFDGIGNGKNYSTPRDLTKIASS 182

Query: 177 IKTDFPQYM---------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              +                    G       + NTN  + ++ GA G+KTG    + + 
Sbjct: 183 AMKNANFRAIVKTKSYTAKTVTKTGSTRTMATWTNTNTLLSSYKGAIGVKTGSGPEAKYC 242

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +V +A +G +++I  +L +   N R   +  LL+ GF  
Sbjct: 243 LVFAATRGSKTVIGTVLASSSINQRATDATKLLNYGFAR 281


>gi|308180223|ref|YP_003924351.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|308045714|gb|ADN98257.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 412

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 127/342 (37%), Gaps = 38/342 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
               ++  +  N+    + ++ +++    ++D  +G V+     D     ASL+KLMT Y
Sbjct: 15  LTATVSGVLSCNVAAHATSSKADEVKAAYVMDAKSGQVVYAQNADQKLPIASLSKLMTLY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +V   ++  +   T  + I KN  +       S        T T+       +V S+N  
Sbjct: 75  LVERAIEHGQIKWTDAVPIRKNVRKMATSATLSVMPMPAKETFTVRELFAATLVGSSNSG 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----------------HGH 163
           A+A+ E +  +  KF++ MN  +    L    F++A G+                    +
Sbjct: 135 AIALGEYVAGSNDKFIKLMNQQAAKWHL-DASFISASGLDNTDLKNYDLKIKGTSDQDQN 193

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMK 217
             +AR +  ++  +   +P  +     + ++I     P +   +            DG+K
Sbjct: 194 LVSARAVTTIAQHLIDAYPDVIQVANQRSVKIHKYTVPTSVEILKGAEYYDPRVPVDGLK 253

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG+T  +G  +VA+  Q    +IA  LG   + T N     +L           K     
Sbjct: 254 TGYTNQAGACLVATYRQNGHRMIATTLGGAWQFTANNNLRLML-----------KTTEQY 302

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           K    ++++ ++P    +V    K         K+   +   
Sbjct: 303 KQVVPKSINYQIPGTQTKVRLVTKYNSKLWVNSKQPMTQTKI 344


>gi|296876825|ref|ZP_06900873.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432327|gb|EFH18126.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 15912]
          Length = 449

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/357 (19%), Positives = 135/357 (37%), Gaps = 57/357 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------------KLPYYTLLDTNTGHVIA 43
           ++++L+ I + +     P L+ A+                   +     ++D NTG+V+ 
Sbjct: 2   IKKYLIHICLLLSLLCQPILASADELVDMAQKMYPNDNVQAINRPHSSLIIDGNTGNVLW 61

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKK 98
           ++  D   +PAS++KLMT Y++F  +   K    T I  + +           +N+    
Sbjct: 62  KDNIDEVRDPASMSKLMTLYLLFEDMANGKISKDTVIKATASDQAIGKIYEISNNNIVAG 121

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 +     ++  S     +            F++ MN  +K LG++ T + N  G 
Sbjct: 122 VDYTIPELITMTVVPSSNVSTLMLANLMSNNDPDAFIERMNAKAKELGMTNTVWNNPSGA 181

Query: 159 V---------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + TTARD+ IL +     +P  ++Y     + +K       
Sbjct: 182 AISTLQGYYQVNNYPNDAANQTTARDLGILVYHFINQYPDILNYTNQAQVTVKKGTPYEE 241

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DG+KTG +    FN +A+  +G+Q LIAVI+G  D      
Sbjct: 242 TFDTYNYSLPGAKYALKGVDGLKTGSSPRGAFNYIATIKRGNQRLIAVIMGVGDWADQDG 301

Query: 252 ---RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
              R+    +L+   + +   +K ++  +     Q +  +   + +    T K+   
Sbjct: 302 EYYRHPFGNALIEKAYKDFGYKKLLDAGV-----QKIDGKTYTLEKPFYATVKKGAK 353


>gi|218507214|ref|ZP_03505092.1| probable D-alanyl-D-alanine carboxypeptidase protein [Rhizobium
           etli Brasil 5]
          Length = 200

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 99/200 (49%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+     + A+        ++D  +G V+  +  D    PASLTK+M
Sbjct: 1   MTKMTSRLRATALSSALLMGAFAQAEAGQASFVVDAQSGQVLEASNQDDLNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L + +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHQGRLTWEQKLTMSENAESKEPFKLAIGAGRQVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
           VAIAE L  +E+ F + M + +  LG+  T F N  G+      TTARDMA L   +  D
Sbjct: 121 VAIAEQLGGSEQAFARAMTDKAHQLGMKDTVFKNPSGLPDPEQVTTARDMATLGVSLMRD 180

Query: 181 FPQYMHYFQIKGLEIKGKKY 200
           FP+    F ++G + +G K 
Sbjct: 181 FPEEFKLFSMRGFQFRGMKL 200


>gi|237809560|ref|YP_002894000.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Tolumonas
           auensis DSM 9187]
 gi|237501821|gb|ACQ94414.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Tolumonas
           auensis DSM 9187]
          Length = 413

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 11/255 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            N  P  S +         +++ NTG ++           AS+TKLMTA VV       K
Sbjct: 154 VNTIPMTSGSPFLDSNAALIMNANTGRMVYGKNAARRTPIASITKLMTAMVVLDA----K 209

Query: 74  AMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             +  PITI+  +      S+S  + G+T++  + + L ++ S N  A ++A +    + 
Sbjct: 210 LSMDQPITITNADVDRVKRSSSRLEIGTTLSRYDTMWLALMSSENRAAHSLARTYPGGKG 269

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
            F+  MN  ++ LG+  T F ++ G+    + +TA D+A++                 + 
Sbjct: 270 AFIAAMNRKARALGMRNTVFYDSTGL-NKNNTSTAADLALMVQAAYRYPQIRQLSTSTEH 328

Query: 193 LEI----KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             I    +   Y N+N  V       +  KTG+   +G  +V  A   ++ ++ V L A 
Sbjct: 329 DIISASGRQLHYQNSNALVREGAWDIELSKTGYIKEAGRCLVMVADVQNKPMVMVFLNAG 388

Query: 248 DRNTRNKVSASLLSM 262
             + R   + +L S 
Sbjct: 389 APSGRINDARNLKSW 403


>gi|157370801|ref|YP_001478790.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Serratia
           proteamaculans 568]
 gi|157322565|gb|ABV41662.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Serratia
           proteamaculans 568]
          Length = 320

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 109/266 (40%), Gaps = 9/266 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK-LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           R+F  I+ + +L  +    + A          +++  TG ++ +   +     ASLTKLM
Sbjct: 56  RRFGAILVLTLLFILPAAQAAAPLALYSKSVLVVNQRTGKILYQKQANRVQPIASLTKLM 115

Query: 61  TAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           TA V     +     L   + ++  +      ++S    GST++  + L + ++ S N  
Sbjct: 116 TAMVTLDSKRP----LGNRMMVTAADRDLLKKTHSRLTIGSTLSRRDMLHIALMSSENRA 171

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A A++ +     K FV  MN  ++ +G+    F +  G+      +    + +++   + 
Sbjct: 172 ASALSRNYPGGRKAFVAKMNQKARTIGMKHARFYDPTGLTPRNVASANDLLKMVNHAYRY 231

Query: 180 DFPQYMHYFQIKGLEIKGKK--YPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGD 236
              +     + + +     +  Y ++N  +          KTGFT  +G  +V   +   
Sbjct: 232 QTIRRFSTDKQQIVRPGRGQLVYRSSNGLINNPTWKIQLQKTGFTDEAGHCLVMRTLIKG 291

Query: 237 QSLIAVILGALDRNTRNKVSASLLSM 262
           Q ++ ++LG+  R    K +  L + 
Sbjct: 292 QPVVIILLGSKQRYGHYKDAIRLKAW 317


>gi|313498269|gb|ADR59635.1| PbpG [Pseudomonas putida BIRD-1]
          Length = 312

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 91/242 (37%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D N+   +  ++ D     AS+TKLMTA VV         MLT  I  +  
Sbjct: 45  LASGSALLIDLNSNKELYSSHADRVVPIASVTKLMTAMVVLDAKLPMDEMLTMTIANNPE 104

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  + GS +     L + ++ S N  A ++A +       F++ MN  +++L
Sbjct: 105 ---MKGVYSRVRLGSQLDRRETLLITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSL 161

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G++ T ++   G+      T      +L    K      +   + K +  +   Y     
Sbjct: 162 GMAHTRYVEPTGLSTQNVSTARDLAKLLMASRKYPMLSELSTTREKTVAFRKPNYTLGFR 221

Query: 202 -NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              +    +       KTGFT  +G  +V      ++ +  VIL A  + T    ++ + 
Sbjct: 222 NTDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRMR 281

Query: 261 SM 262
             
Sbjct: 282 QW 283


>gi|291544768|emb|CBL17877.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. 18P13]
          Length = 470

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 129/374 (34%), Gaps = 42/374 (11%)

Query: 1   MRQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           +++  +++   + +              +     +     L  T+T  V+     D    
Sbjct: 7   IKKTAILLICCVTALHICLPGLRASAMFTPTFDLQSKAAILYSTDTREVLYAKNQDEKMM 66

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTP-----ITISKNASEYPPSNSTFKKGSTMTLDNA 107
           P +L  LMTA +     ++      T            +           +G   TL+  
Sbjct: 67  PGALVNLMTALICVENNQDLAGTQVTVKGSLFDAFVDYSYPSDLRYGEIYRGDVFTLEEL 126

Query: 108 LKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           L  +++ S+ + +V IA+ +   +   FV  MN  ++ +G+  THF N  G       TT
Sbjct: 127 LYAMLLTSSCEASVVIADEIGHGSVPGFVAMMNLKAEEIGMKNTHFTNPDGRYNEYQVTT 186

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW---------------AVGTFL 211
           A DM ++   I+    + +   +      + +   N                  +   + 
Sbjct: 187 AGDMLLMMQYIQEHASKVLEIARTASYSPQIRTQENHQNGTLTWSHANIMMDEESRFYYK 246

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-------DRNTRNKVSASLLSMGF 264
           GA G+KT      G NI+  A +     + +++ +        +     + +A++L   F
Sbjct: 247 GAAGLKTATLQEYGRNIMVDAARDGHHYLVILMQSPIYNENKENTYYHLQDAAAVLDWAF 306

Query: 265 YNKTDRKKIN------YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
            +    + ++       I  +  +   +  +    EE+     + ++ +   +    ++S
Sbjct: 307 GHFNYEEILSLNEEIAEIPVENAKNENNYVILKPREELVMLWPDTVDRSVVQRIVVKEDS 366

Query: 319 HFIDFEKITLLKNK 332
                +K  +L + 
Sbjct: 367 VKAPVQKGQVLGSI 380


>gi|160945058|ref|ZP_02092284.1| hypothetical protein FAEPRAM212_02576 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442789|gb|EDP19794.1| hypothetical protein FAEPRAM212_02576 [Faecalibacterium prausnitzii
           M21/2]
          Length = 325

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 12/237 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                +  LLD  +G V+A+   D    PASLTK+MT  +      +    +T P  I  
Sbjct: 67  DTASRHAILLDAQSGRVLAQKRADERTAPASLTKMMTVLLAIETEPDLDKQVTLPEDIFP 126

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F    T+T+ + L   ++ S  +   A+A+ +  +E+ F   MN  +  
Sbjct: 127 ALQTEKASMAGFVPDETVTVRDLLYGAMLPSGAECCEALAQLVSGSEENFAALMNQKAAE 186

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+  THF NA G+    HY++A DMA L      +      +           ++P   
Sbjct: 187 LGMKNTHFTNATGLTDTEHYSSAADMAKLLQAALHNTTFRTIFTTKHYTTTATAQHPEGV 246

Query: 205 WAVGTFLG------------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
               T LG             +G KTG+T A+G  + + A    +  I V L A   
Sbjct: 247 SLTSTLLGKLDGTELPTGTQIEGGKTGYTAAAGLCLASLATVNGKEYILVTLAAPGD 303


>gi|254669736|emb|CBA03920.1| probable D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha153]
          Length = 369

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 105 IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 164

Query: 64  VVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +       + S    G+ +T    L L ++ S N    A
Sbjct: 165 VVLDA----NLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 220

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 221 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 279

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 280 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 339

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 340 VTIVLLNSPTSATRVNDARKIESW 363


>gi|305679771|ref|ZP_07402581.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           matruchotii ATCC 14266]
 gi|305660391|gb|EFM49888.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           matruchotii ATCC 14266]
          Length = 489

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 12/244 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+    P   + PAS+ K++ A  V +        L   +T+S
Sbjct: 162 PDITASAWLVWDLDSGAVLGTKDPHGRYRPASIIKVLLAMEVINN-----LDLNKVVTVS 216

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             ++    S      G   T+ + L  L+++S ND A A+A+ L   E+   + +N  + 
Sbjct: 217 AESANQEGSAVGIGPGGKYTIRDLLHGLLLQSGNDAAHALAQELGGNEQALTR-VNALAH 275

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-----HYFQIKGLEIKGK 198
           NLG + T+  +  G+   G  T+ARDMAI       +           Y      +  G 
Sbjct: 276 NLGATDTYAASYSGLDAPGMSTSARDMAIFYHYAWKNPTFAQIVGTDEYKFPGYQDNPGW 335

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSA 257
              N N  +       G KTGFT  +    V +   G++ + AVIL       R  + + 
Sbjct: 336 PIGNDNGLLMNDPDGIGGKTGFTSDANHTFVGAKKVGNRRIAAVILDTTVDKGRPWQQAQ 395

Query: 258 SLLS 261
            L+ 
Sbjct: 396 KLID 399


>gi|293607038|ref|ZP_06689381.1| penicillin-binding protein 7 [Achromobacter piechaudii ATCC 43553]
 gi|292814528|gb|EFF73666.1| penicillin-binding protein 7 [Achromobacter piechaudii ATCC 43553]
          Length = 399

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 93/243 (38%), Gaps = 8/243 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           + A   +     + D  T  V+     +     AS++KLMTA VV          +   +
Sbjct: 144 AEAAALRSSTAYVQDLETSTVLFAKNENVVRPIASISKLMTAVVVVDA----NLPMDEML 199

Query: 81  TISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            I+ +  +     ++  + G+ ++  + L L ++ S N  A A+          FV  MN
Sbjct: 200 EITDDDVDGLKHTTSRLRVGTKLSRGDMLHLALMSSENRAANALGRHYPGGLPAFVAAMN 259

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             +++LG+++T F+   G+  +   +      +L    +              +EI  + 
Sbjct: 260 AKAQSLGMTSTRFIEPTGLSSNNVSSPHDLARLLRAASQRPLIHRYSTDTEYDVEINNRT 319

Query: 200 Y--PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
               NTN  V          KTG+   +G  +V  A    + L  V+L +  + +R   +
Sbjct: 320 QTFRNTNLLVRKPDWDIKVSKTGYINEAGECLVMLARINGRDLAIVLLDSQGKLSRIGDA 379

Query: 257 ASL 259
             +
Sbjct: 380 VRI 382


>gi|291557828|emb|CBL34945.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum V10Sc8a]
          Length = 734

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 112/301 (37%), Gaps = 18/301 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++  + G ++ E       +PA L K+M + +          +  +   I 
Sbjct: 13  PEINAQAAIVVTQHEGRILLEKNARMKLSPAFLIKIMASIIALEKCNPNDTVTVSDSVIK 72

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + ++    ++   + G  +++ + +  +++ SAND   A+AE +C +  KF   M   +K
Sbjct: 73  QISNWKGSASINLEAGEKISVLDLIYSMMLVSANDSLFALAEFICGSLDKFAAMMQEKAK 132

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG-----LEIKGK 198
           ++G + T    A G      Y+ A D+AI+     T+          K       +   +
Sbjct: 133 SIGAADTTVTTADGRFTAEQYSNAYDLAIICRYCMTNRMFRTIAATDKYTIPATNKNGSR 192

Query: 199 KYPNTN------WAVGTFLGADGMKTGFTCASGFNIVAS----AIQGDQSLIAVILGALD 248
              NTN           +  A G+K+G+T  S   +  S    A +  + ++A+ILGA +
Sbjct: 193 DLQNTNLLINSGNRRYRYETAIGIKSGYTARSKSCLACSALPPANKFGEEVLAIILGAEN 252

Query: 249 RNTR---NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
                     + +LL   F N           ++   +     V  + E +    +   +
Sbjct: 253 TKQMKYVFYDAITLLDFTFNNYEALSGKKPEQQNSEAEKSITTVGKLCEILNAELRNAAD 312

Query: 306 Y 306
            
Sbjct: 313 V 313


>gi|225020583|ref|ZP_03709775.1| hypothetical protein CORMATOL_00590 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946529|gb|EEG27738.1| hypothetical protein CORMATOL_00590 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 498

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 12/244 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+    P   + PAS+ K++ A  V +        L   +T+S
Sbjct: 171 PDITASAWLVWDLDSGAVLGTKDPHGRYRPASIIKVLLAMEVINN-----LDLNKVVTVS 225

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             ++    S      G   T+ + L  L+++S ND A A+A+ L   E+   + +N  + 
Sbjct: 226 AESANQEGSAVGIGPGGKYTIRDLLHGLLLQSGNDAAHALAQELGGNEQALAR-VNALAH 284

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-----HYFQIKGLEIKGK 198
           NLG + T+  +  G+   G  T+ARDMAI       +           Y      +  G 
Sbjct: 285 NLGATDTYAASYSGLDAPGMSTSARDMAIFYHYAWKNPTFAQIVGTDEYKFPGYQDNPGW 344

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSA 257
              N N  +       G KTGFT  +    V +   G++ + AVIL       R  + + 
Sbjct: 345 PIGNDNGLLMNDPDGIGGKTGFTSDANHTFVGAKKVGNRRIAAVILDTTVDKGRPWQQAQ 404

Query: 258 SLLS 261
            L+ 
Sbjct: 405 KLID 408


>gi|254804631|ref|YP_003082852.1| probable D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha14]
 gi|254668173|emb|CBA04859.1| probable D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha14]
          Length = 369

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 14/264 (5%)

Query: 8   IAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           I +   S I P  + A T           +++  TG ++ +   D     AS++KLM+A 
Sbjct: 105 IEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISKLMSAM 164

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV          +   +TI+ +  +    + S    G+ +T    L L ++ S N    A
Sbjct: 165 VVLDA----NLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRATHA 220

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +  +       FV  MN  +++LG+  + F    G+    + +TA+D++++         
Sbjct: 221 LGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGL-NFQNVSTAKDLSLMVNAAAQYPQ 279

Query: 183 QYMHYFQIK---GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQS 238
              +          +   + Y N+N  V   +   +  KTG+   +G ++V  A   +Q 
Sbjct: 280 IRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKANIQNQP 339

Query: 239 LIAVILGALDRNTRNKVSASLLSM 262
           +  V+L +    TR   +  + S 
Sbjct: 340 VTIVLLNSPTSATRVNDARKIESW 363


>gi|33595888|ref|NP_883531.1| D-alanyl-D-alanine carboxypeptidase [Bordetella parapertussis
           12822]
 gi|33565967|emb|CAE36518.1| probable D-alanyl-D-alanine carboxypeptidase [Bordetella
           parapertussis]
          Length = 259

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 96/239 (40%), Gaps = 10/239 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     + D  T  V+     +     AS++KLMTA VV          +   I I+ +
Sbjct: 15  LRSSTAYVQDLETSTVLFAKNENVVRPIASISKLMTALVVVDA----NLPMDEMIEITDD 70

Query: 86  ASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +     ++  + G+ ++  + L L ++ S N  A A+  +       FV  MN  +++
Sbjct: 71  DVDTLKHTTSRLRVGTVLSRGDMLHLALMSSENRAAHALGRNYPGGMPAFVAAMNAKARS 130

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGKKYP 201
           LG+  THF+   G+    + ++ RD+A +          + +    +       + + + 
Sbjct: 131 LGMLNTHFVEPTGL-SSENVSSPRDLARMLRAASQRPLIHRYSTDTEYEVEINNRTQTFR 189

Query: 202 NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           NTN  V          KTGF   +G  +V  A    + +  V+L +  + +R   +  +
Sbjct: 190 NTNLLVRKPDWDIKVSKTGFINEAGECLVMLARINGRDMAIVLLDSQGKLSRIGDAVRI 248


>gi|167750846|ref|ZP_02422973.1| hypothetical protein EUBSIR_01829 [Eubacterium siraeum DSM 15702]
 gi|167656281|gb|EDS00411.1| hypothetical protein EUBSIR_01829 [Eubacterium siraeum DSM 15702]
          Length = 734

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 112/301 (37%), Gaps = 18/301 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++  + G ++ E       +PA L K+M + +          +  +   I 
Sbjct: 13  PEINAQAAIVVTQHEGRILLEKNARMKLSPAFLIKIMASIIALEKCNPNDTVTVSDSVIK 72

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + ++    ++   + G  +++ + +  +++ SAND   A+AE +C +  KF   M   +K
Sbjct: 73  QISNWKGSASINLEAGEKISVLDLIYSMMLVSANDSLFALAEFICGSLDKFAAMMQEKAK 132

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG-----LEIKGK 198
           ++G + T    A G      Y+ A D+AI+     T+          K       +   +
Sbjct: 133 SIGAADTTVTTADGRFTAEQYSNAYDLAIICRYCMTNRMFRTIAATDKYTIPATNKNGSR 192

Query: 199 KYPNTN------WAVGTFLGADGMKTGFTCASGFNIVAS----AIQGDQSLIAVILGALD 248
              NTN           +  A G+K+G+T  S   +  S    A +  + ++A+ILGA +
Sbjct: 193 DLQNTNLLINSGNRRYRYETAIGIKSGYTARSKSCLACSALPPANKFGEEVLAIILGAEN 252

Query: 249 RNTR---NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
                     + +LL   F N           ++   +     V  + E +    +   +
Sbjct: 253 TKQMKYVFYDAITLLDFTFNNYEALSGKKPEQQNSEAEKSITTVGKLCEILNAELRNAAD 312

Query: 306 Y 306
            
Sbjct: 313 V 313


>gi|253997566|ref|YP_003049630.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylotenera
           mobilis JLW8]
 gi|253984245|gb|ACT49103.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylotenera
           mobilis JLW8]
          Length = 334

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 100/249 (40%), Gaps = 12/249 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +           +L+  TG V+     + P   AS+TKLMTA V+          +   +
Sbjct: 76  TTPLKLASAKALVLNQQTGEVLFAKNTNLPTPIASVTKLMTAMVMLDA----HLPMDELL 131

Query: 81  TISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            IS    +Y    ++    G+T+T    L+L ++ S N  A A+  +       FV+ MN
Sbjct: 132 NISDEDVDYLKHTTSRLSVGTTLTRGEMLQLALMASENRAASALGRNYPGGSYAFVKAMN 191

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS-----WRIKTDFPQYMHYFQIKGLE 194
             +K LG++A+ F+++ G+    + +TA D+A +      +                   
Sbjct: 192 QKAKLLGMNASRFVDSTGLDS-NNVSTAEDLAKMVDAAYHYAEIRQVTTLASQEITLYGR 250

Query: 195 IKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                + NTN  V       G  KTGF   +G  +V  A    Q +I V+L +  + TR 
Sbjct: 251 RSPLSFVNTNALVRGGKWDIGLSKTGFINEAGRCLVMQAHISGQPVIIVLLDSAGKLTRI 310

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 311 GDANRIRKW 319


>gi|56477732|ref|YP_159321.1| D-alanyl-D-alanine carboxypeptidase [Aromatoleum aromaticum EbN1]
 gi|56313775|emb|CAI08420.1| probable D-alanyl-D-alanine carboxypeptidase [Aromatoleum
           aromaticum EbN1]
          Length = 263

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 8/243 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              +   + +++  TG VI E   D     AS+TKLMTA VV          L+  I I+
Sbjct: 7   PQLRSAAFVVVNQATGEVILEKKSDSVLPIASITKLMTAMVVLD----GGQSLSEEIVIT 62

Query: 84  KNA-SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           ++       + S    G+ +T +  L L ++ S N  A A+  S       FV+ MN  +
Sbjct: 63  EDDLDTIKGTGSRLALGTRLTREQLLHLALMSSENRAASALGRSYPGGIAAFVKAMNVKA 122

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP- 201
           + +GL  T F ++ G+      +    + ++S        +         +EI+G+ +  
Sbjct: 123 RLVGLGDTRFSDSTGLDPTNVSSPRDLVRMVSAASTYPLIRRFSTSSEDHVEIRGRMHRF 182

Query: 202 -NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  V +     D  KTG+   +G  +V  A   +Q +I V++ +  R TR   +  +
Sbjct: 183 GNTNSLVRSPEWEIDVSKTGYIREAGRCLVMQARLLNQRVIIVLMDSEGRYTRTADAVRI 242

Query: 260 LSM 262
              
Sbjct: 243 KKW 245


>gi|320009813|gb|ADW04663.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 299

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 21/264 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
               T       +++  T   +     D   +  S TK+MTA VV     +K   L   +
Sbjct: 39  PPTPTITAKGGFVMNNGTAKTLYGKSADTRRSTGSTTKIMTAKVVL---AQKNLNLDAKV 95

Query: 81  TI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           T+    S    +   S++    G  +T+   L  L++ S  D A A+A+       +  +
Sbjct: 96  TVQKAYSDYIVKNTASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALADKFGTGSTRAAR 155

Query: 137 ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL--------SWRIKTDFP 182
                  MN ++K+LGL  THF +  G+    +Y+T RD+  +        ++R      
Sbjct: 156 VKSFIGKMNASAKSLGLKNTHFDSFDGIGGGSNYSTPRDLTKIASSAMKNSTFRAIVKTK 215

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                   K    +   + NTN  +G++ G  G+KTG    + + +V +A +  +++I  
Sbjct: 216 STKQKVTTKTGGYRYMSWANTNAMLGSYSGMIGVKTGSGPTAKYCLVFAATRNGKTVIGT 275

Query: 243 ILGALDRNTRNKVSASLLSMGFYN 266
           +L +    TR   +  LL  GF  
Sbjct: 276 VLTSTSATTRTADAKKLLDYGFKK 299


>gi|34498608|ref|NP_902823.1| D-alanyl-D-alanine-endopeptidase [Chromobacterium violaceum ATCC
           12472]
 gi|34104462|gb|AAQ60820.1| D-alanyl-D-alanine-endopeptidase [Chromobacterium violaceum ATCC
           12472]
          Length = 289

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 23/281 (8%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSI------------AETNKLPYYTLLDTNTGHVIAENYP 47
           +++   ++++ A+   +                  A         +L+  TG  + E   
Sbjct: 2   IKKIASLLVSAALAMPVLAGSPQGVLVASEMAGYTAPRLNSHSVLILNGQTGEALYEKNA 61

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK--GSTMTLD 105
                 AS++KLMTA V+          L   +T+S    +     ++      +    +
Sbjct: 62  HQRMPIASISKLMTAMVLLDSGAP----LDQMVTVSDAEIDRVKHTTSRLAVGTTLSRQE 117

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             L  L+       A     +       FV+ MN  +++LG++ T F +  G+      T
Sbjct: 118 MLLLALMSSENRAAATLARTAFPGGTPIFVERMNLKARSLGMTETVFHDPTGLDVRNTST 177

Query: 166 T---ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFT 221
               A+ +                  QI  +  +  +Y N+N  V          KTG+ 
Sbjct: 178 AADLAKMVQAAQKYPLIREFTTTERHQIVSVRNRVLQYKNSNALVREGDWDIAVQKTGYI 237

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +G  +V  A  G Q LI V+L A   + R   + ++ + 
Sbjct: 238 QEAGRCMVLQATVGSQPLIFVLLDAGASSARANDAKNIRTW 278


>gi|239623982|ref|ZP_04667013.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522013|gb|EEQ61879.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 337

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 101/278 (36%), Gaps = 26/278 (9%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           +F    A  +                    L D +   V+          PAS+TK+MTA
Sbjct: 63  RFSDAFASDLCVVTDEASFDPGFATSEAAALFDLDDREVLYSKDAFERMYPASITKIMTA 122

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            V       K  +L T   +              + G T+TL+  L  L++ S ND   A
Sbjct: 123 LVAIREGDLKSRVLVTDDAVITEPGATL---CGIEPGDTLTLEQLLYGLMLPSGNDAGAA 179

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           IA  +  +   F   MN  +  LG + THFMN HG+    HYTTA D+ ++       +P
Sbjct: 180 IAVHIAGSVDAFADMMNEEALRLGATGTHFMNPHGLNDPDHYTTAYDLYLIFNEAL-KYP 238

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLG------------------ADGMKTGFTCAS 224
            +               Y N N    +                       G KTG T A+
Sbjct: 239 VFRQIVGTTAYTAN---YHNKNSEPVSKTWKGSNWFMTGERETPDGLKVFGGKTGTTKAA 295

Query: 225 GFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLS 261
           G+ ++ ++    D+  I+V+L A  R        +++S
Sbjct: 296 GYCLIMASRDDSDKEYISVVLKADSRPHLYDNMTNIIS 333


>gi|291524730|emb|CBK90317.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale DSM 17629]
          Length = 371

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 19/257 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       L D +    I           AS TK++T  V           +   +
Sbjct: 63  VNEPRLHAVSAALYDADDETFIYGKNMRDSMANASTTKILTCIVALEKAD-----INDTV 117

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           TIS+NA+  P        G++  + + L  ++++S ND A AIAE +  + + F + MN 
Sbjct: 118 TISQNAASQPEVKLGLVAGNSYNMKDLLYGMMLESFNDCAYAIAEHVGGSTEGFAKLMNE 177

Query: 141 TSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYMHYFQIKG---- 192
            +  +G   T+F+  +G+        H++TA D+ ++        P+   + +I      
Sbjct: 178 KANEIGCLGTYFITPNGLDAENDISFHHSTAGDLCVIMSYCAWKSPKSTQFLEITQTMQY 237

Query: 193 ---LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA--- 246
               +     + N N  +         KTGFT  +G+  VA+  +  + +   +LG    
Sbjct: 238 TFETKEGQMVFSNHNRLLTETDYCISGKTGFTTKAGYCYVAAVEKDGRRMCLSLLGCGWP 297

Query: 247 LDRNTRNKVSASLLSMG 263
            ++N +   + SL+   
Sbjct: 298 NNKNYKWADAKSLVEYA 314


>gi|299782758|gb|ADJ40756.1| Serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus fermentum
           CECT 5716]
          Length = 389

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 116/331 (35%), Gaps = 29/331 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           T        +D  TG V+     +     AS++KJ+T  V+   +K  K    T + ++K
Sbjct: 55  TVNAKAAIAIDATTGQVLYXKNANTKLAIASISKJITVGVIEQEIKAGKLSWNTKVKVTK 114

Query: 85  NA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                      SN T   G + T+    +  ++KSA+  A+ ++ +   +   FV+ M  
Sbjct: 115 EEAKLSENTEYSNITLTAGKSYTVKELTEAAMIKSADAAAITLSRATGDSTASFVKKMQA 174

Query: 141 TSKNLGLSATHFMNAHGVVQHG--------------HYTTARDMAILSWRIKTDFPQYMH 186
             K  G++     N  G+                  +  TA D+A ++  +  ++P  ++
Sbjct: 175 FVKKAGVTDAKLYNQVGLTNSQMGSYGLKGVAKNAENEMTATDVAKIAQYLIKNYPSLLN 234

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMKTGFTCASGFNIVASAIQGDQSLI 240
             ++    I G      N  +            DG+KTG +  +G   V++       +I
Sbjct: 235 ITKLTSTTIDGTTVTTINKMLAGQSDAPTQVKIDGLKTGTSDKAGACFVSTGTYQGHRII 294

Query: 241 AVILGAL-DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
            V+L A    + R   +A+L  +     T       +        ++        ++   
Sbjct: 295 TVVLHATGGGDERFTQTANLYHLIANEYTAYTVQPSVAXTVPNGKVTTTTLTTQGKITLW 354

Query: 300 QKEII----NYNTQMKEAKDKESHFIDFEKI 326
           +K+      +     K A          +K 
Sbjct: 355 KKDGTLLSPSLAINSKAADKNGKLTAPVKKG 385


>gi|291530580|emb|CBK96165.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum 70/3]
          Length = 734

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 111/301 (36%), Gaps = 18/301 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++  + G ++ E       +PA L K+M + +          +  +   I 
Sbjct: 13  PEINAQAAIVVTQHEGRILLEKNARMKLSPAFLIKIMASIIALEKCNPNDTVTVSDSVIK 72

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           + ++    ++   + G  +++ + +  +++ SAND   A+AE +C +  KF   M   +K
Sbjct: 73  QISNWKGSASINLEAGEKISVLDLIYSMMLVSANDSLFALAEFICGSLDKFAVMMQEKAK 132

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG-----LEIKGK 198
           ++G + T    A G      Y+ A D+AI+     T+          K       +   +
Sbjct: 133 SIGAADTTITTADGRFTAEQYSNAYDLAIICRYCMTNRMFRTIAATDKYTIPATNKNGSR 192

Query: 199 KYPNTN------WAVGTFLGADGMKTGFTCASGFNIVAS----AIQGDQSLIAVILGALD 248
              NTN           +  A G+K+G+T  S   +  S    A +  + ++A+ILGA +
Sbjct: 193 DLQNTNLLINSGNRRYRYETAIGIKSGYTARSKSCLACSALPPANKFGEEVLAIILGAEN 252

Query: 249 RNTR---NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
                     + +LL   F N           ++         V  + E +    +   +
Sbjct: 253 TKQMKYVFYDAITLLDFTFNNYEALSGKKPEQQNSEAGKTITTVGKLCEILNAELRNAAD 312

Query: 306 Y 306
            
Sbjct: 313 V 313


>gi|28378040|ref|NP_784932.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           WCFS1]
 gi|28270874|emb|CAD63779.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
           WCFS1]
          Length = 412

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 127/342 (37%), Gaps = 38/342 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
               ++  +  N+    + ++ +++    ++D  +G V+     D     ASL+KLMT Y
Sbjct: 15  LTATVSGVLGCNVAAHATSSKADEVKAAYVMDAKSGQVVYAQNADQKLPIASLSKLMTLY 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +V   ++  +   T  + I KN  +       S        T T+       +V S+N  
Sbjct: 75  LVERAIEHGQIKWTDAVPIRKNVRKMATSATLSVMPMPAKETFTVRELFAATLVGSSNSG 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----------------HGH 163
           A+A+ E +  +  KF++ MN  +    L    F++A G+                    +
Sbjct: 135 AIALGEYVAGSNDKFIKLMNQQAAKWHL-DASFISASGLDNTDLKNYDLKIKGTSDQDQN 193

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMK 217
             +AR +  ++  +   +P  +     + ++I     P +   +            DG+K
Sbjct: 194 LVSARAVTTIAQHLIDAYPDVIQVANQRSVKIHKYTVPTSVEILKGAEYYDPRVPVDGLK 253

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII 277
           TG+T  +G  +VA+  Q    +IA  LG   + T N     +L           K     
Sbjct: 254 TGYTNQAGACLVATYRQNGHRMIATTLGGAWQFTANNNLRLML-----------KTTEQY 302

Query: 278 KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           K    ++++ ++P    +V    K         K+   +   
Sbjct: 303 KQVVPKSINYQIPGTQTKVRLVTKYNSKLWVNSKQPMTQTKI 344


>gi|293400703|ref|ZP_06644848.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305729|gb|EFE46973.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 332

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 77/334 (23%), Positives = 135/334 (40%), Gaps = 31/334 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L      +++         ET     Y ++      VI E       + AS++K+M
Sbjct: 4   MKKLLCFFLCLIINL--------ETVHGQSYCVMSDADNTVIEEKDMHKVQSVASISKVM 55

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +           L       K   +   S    K+G  ++L + L  L+++S ND A
Sbjct: 56  TAILALEK-----GDLNATWKTGKELKQAYGSMIYLKEGQQVSLRSLLYGLMLRSGNDAA 110

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIK 178
           + IA  + KT+KKFVQ MN  +K +G+  THF N  G+     G+ ++A DMA+L     
Sbjct: 111 LEIALHIGKTQKKFVQMMNEKAKEIGMLDTHFANPSGLDEEDGGNLSSAYDMALLMSY-A 169

Query: 179 TDFPQYMHYFQIKGLEIKG-KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
              P +      K    +   ++ N N  +  +  A   KTGFT  +G  ++++A   + 
Sbjct: 170 MKNPAFREISGTKYYTSEWNYRWRNKNKLLFEYPFAIAGKTGFTKKAGRTLISAAKHENV 229

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
             + V LG  D               F+ +   K  + I            + +  +++C
Sbjct: 230 ENVIVTLGMGD------------DFTFHEQKHTKVFDEIKVIPILAKGKYVIDH--KQIC 275

Query: 298 TTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
             +   +    + +      SHF D E I  ++N
Sbjct: 276 IPEDIAVTITQKEQAKLMVSSHFEDKEFIIEIRN 309


>gi|126651542|ref|ZP_01723745.1| hypothetical protein BB14905_13055 [Bacillus sp. B14905]
 gi|126591491|gb|EAZ85597.1| hypothetical protein BB14905_13055 [Bacillus sp. B14905]
          Length = 278

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 103/260 (39%), Gaps = 13/260 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M+++++   + ++  +    +           +       LL+   G V+ E   D    
Sbjct: 1   MKKWVLFCCLVIVIFVLYDTNKTQEFAHLELPSLHSQNALLLNEQ-GDVLYEKNADAIIY 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           PASLTK+MTA V      + +             +    S + F  G  +T+++ L   +
Sbjct: 60  PASLTKIMTAIVAIEMTDDLQMQTIVKPQTIAKYTAQNASMAGFHAGDFVTIEDLLYGTL 119

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + S  D    +AE++  +E +FV +MN  ++ LG+ ATHF+N  G+    H ++ +DM+ 
Sbjct: 120 LASGADATATLAEAIAGSEDEFVTYMNKKAQELGMDATHFINTSGLHDEAHVSSLQDMSK 179

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGM----KTGFTCASGFNI 228
           L      +   Y  +           +    N         DG     KTG+T  +G  +
Sbjct: 180 LLRYALENPTFYQIFTSKAYTTHVPTELLIANSLFTRMPSMDGTILGGKTGYTPEAGLCL 239

Query: 229 VASAIQGDQSLIAVILGALD 248
            +   +  +  + +   A  
Sbjct: 240 ASLMEKDGRKFLFITTNAPG 259


>gi|295838564|ref|ZP_06825497.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. SPB74]
 gi|295827061|gb|EDY44744.2| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. SPB74]
          Length = 518

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 91/299 (30%), Gaps = 49/299 (16%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM---TAYVVFSFLKEKKAMLTTP 79
            +      + + D  +G ++A   P     PAS  K++   T    F   +  +  L   
Sbjct: 126 PKKLTARSWVVADAESGEILAARNPHWRLAPASTLKMLFADTLLPKFPKDRVHQVTLKDL 185

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             I + +S              + L   L+          AV +  ++     + VQ M 
Sbjct: 186 DGIGEGSSLVGIKEDLPYSVHDLWLGVFLRSGND------AVHVLSAMNGGVGRTVQDMR 239

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
             +  L  + TH +   G    G  ++A D+ + +     +   +  Y      +     
Sbjct: 240 ARAHELQANDTHVVTPDGYDAKGQVSSAYDLTLFARDGLQN-ADFREYCSTAEAQFPGEF 298

Query: 196 ---------------------------KGKKYPNTNW------AVGTFLGADGMKTGFTC 222
                                      +     NTN        +  + G  G+K G T 
Sbjct: 299 AKKRKKDKDKDEKKPVDGQAGPGQGPREHFGIQNTNRLLTGAPDLKPYQGIAGVKNGNTT 358

Query: 223 ASGFNIVASAIQGDQSLIAVILG--ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
            +G    A A +GD+ L+  ++     +     + +  LL  GF        +  ++  
Sbjct: 359 NAGATYTAYAQRGDRKLLVTVMHPDYDETQAVYREAGRLLDWGFAADGKVTPVGELVPT 417


>gi|295091874|emb|CBK77981.1| D-alanyl-D-alanine carboxypeptidase [Clostridium cf.
           saccharolyticum K10]
          Length = 283

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 63/272 (23%), Positives = 109/272 (40%), Gaps = 24/272 (8%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + A A+                    L +   G V+          PAS+TK+MTA +  
Sbjct: 13  LFASALCVVDGETKDAGTELTAEAGALFNITDGTVLYSKNVFEELYPASITKVMTAILAI 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
              +     L+  +T++++A       S    K G T+T++  L  L++ S ND A AIA
Sbjct: 73  EEGE-----LSDEVTVTQDAVITEAGASLAGIKPGDTLTMEQLLYGLMIPSGNDAANAIA 127

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--------- 175
             +  + + F + MN  ++ LG + THF N +G+    HYTTA D+ ++           
Sbjct: 128 VHMSGSLESFAERMNEKARELGATHTHFKNPNGLTDPEHYTTAYDLYLIFNEALKLPKFR 187

Query: 176 -----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                   T   +      +      G  Y N        +   G KTG T A+G+ ++ 
Sbjct: 188 EVIGADSYTASYRDADGNTVSKTWKVGNWYQNGEEKAPQGVTVLGGKTGTTQAAGYCLIM 247

Query: 231 SAIQG--DQSLIAVILGALDRNTRNKVSASLL 260
            A +    +  I+V+L A +R        +++
Sbjct: 248 -AERDESGREYISVVLKAENRQGLYDNMTNII 278


>gi|291528948|emb|CBK94534.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale M104/1]
          Length = 371

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 108/276 (39%), Gaps = 19/276 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ + + A   ++                  L D +    I           AS TK++T
Sbjct: 44  KKSVFMAAENTVAKNTDKAVNEPRLHAVSAALYDADDETFIYGKNMRDSMANASTTKILT 103

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             V           +   +TIS+NA+  P        G++  + + L  ++++S ND A 
Sbjct: 104 CIVALEKAD-----INDTVTISQNAASQPEVKLGLVAGNSYNMKDLLYGMMLESFNDCAY 158

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRI 177
           AIAE +  + + F + MN  +  +G   T+F+  +G+        H++TA D+ ++    
Sbjct: 159 AIAEHVGGSTEGFAKLMNEKANEIGCLGTYFITPNGLDAENDISFHHSTAGDLCVIMSYC 218

Query: 178 KTDFPQYMHYFQIKG-------LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               P+   + +I          +     + N N  +         KTGFT  +G+  VA
Sbjct: 219 AWKSPKSTQFLEITQTMQYTFETKEGQMVFSNHNRLLKETDYCISGKTGFTTKAGYCYVA 278

Query: 231 SAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMG 263
           +  +  + +   +LG     ++N +   + SL+   
Sbjct: 279 AVEKDGRRMCLSLLGCGWPNNKNYKWADAKSLVEYA 314


>gi|33592636|ref|NP_880280.1| D-alanyl-D-alanine carboxypeptidase [Bordetella pertussis Tohama I]
 gi|33600419|ref|NP_887979.1| D-alanyl-D-alanine carboxypeptidase [Bordetella bronchiseptica
           RB50]
 gi|33568018|emb|CAE31931.1| probable D-alanyl-D-alanine carboxypeptidase [Bordetella
           bronchiseptica RB50]
 gi|33572282|emb|CAE41834.1| probable D-alanyl-D-alanine carboxypeptidase [Bordetella pertussis
           Tohama I]
 gi|332382053|gb|AEE66900.1| D-alanyl-D-alanine carboxypeptidase [Bordetella pertussis CS]
          Length = 259

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 8/238 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     + D  T  V+     +     AS++KLMTA VV          +   I I+ +
Sbjct: 15  LRSSTAYVQDLETSTVLFAKNENVVRPIASISKLMTALVVVDA----NLPMDEMIEITDD 70

Query: 86  ASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +     ++  + G+ ++  + L L ++ S N  A A+  +       FV  MN  +++
Sbjct: 71  DVDTLKHTTSRLRVGTVLSRGDMLHLALMSSENRAAHALGRNYPGGMPAFVAAMNAKARS 130

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PN 202
           LG+  T F+   G+      +      +L    +              +EI  +     N
Sbjct: 131 LGMLNTRFVEPTGLSSENVSSPRDLARMLRAASQRPLIHRYSTDTEYEVEINNRTQTFRN 190

Query: 203 TNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           TN  V          KTGF   +G  +V  A    + +  V+L +  + +R   +  +
Sbjct: 191 TNLLVRKPDWDIKVSKTGFINEAGECLVMLARINGRDMAIVLLDSQGKLSRIGDAVRI 248


>gi|86148565|ref|ZP_01066850.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. MED222]
 gi|85833631|gb|EAQ51804.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. MED222]
          Length = 200

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++  + ++ F     +  A       + L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 16  VALSATIATSSFAAPIIVPDAPQIAAKGFVLMDYHSGKVLAEKEMNTQLSPASLTKMMTS 75

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YVV   L+     L   + IS+NA        S    + G+T+ ++   + +I++S ND 
Sbjct: 76  YVVGQELERGNINLNDDVVISENAWAKNFPDSSKMFIEVGTTVKVEELNRGIIIQSGNDA 135

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            VA+AE +  +E  FV  MN  + ++G+  THF N HG+     Y+T  DMA+L   +  
Sbjct: 136 CVAMAEHIAGSEDAFVDLMNAWASSIGMKDTHFANVHGLDNPNLYSTPYDMALLGQALIR 195

Query: 180 DFPQ 183
           D P 
Sbjct: 196 DVPD 199


>gi|319937143|ref|ZP_08011550.1| hypothetical protein HMPREF9488_02385 [Coprobacillus sp. 29_1]
 gi|319807509|gb|EFW04102.1| hypothetical protein HMPREF9488_02385 [Coprobacillus sp. 29_1]
          Length = 406

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 70/344 (20%), Positives = 132/344 (38%), Gaps = 17/344 (4%)

Query: 1   MRQFLVIIAMAMLSNIF-----PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ +  +   +L  +       + +I       Y  L D +T  V  E   +    PAS
Sbjct: 1   MKKIVSSLIACLLIFLSIQPIHAYTNINIELYSQYAYLYDRDTSLVYMEKKSNEKIYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK++T  +   ++ + + ++T      K   E   + +    G  +T ++ L   ++ S
Sbjct: 61  MTKILTVSLALDYITDLQEVVTIKQADFKGVVEEGATVAGLFPGEKVTYEDLLYGALLPS 120

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             D   A+A  +       V  MN     LGL  THFMN  G+    HYTTA +MA++  
Sbjct: 121 GADACQALARLIFGDVDHMVTAMNEKVIELGLQQTHFMNVTGLHDEKHYTTAHEMALILN 180

Query: 176 RIKTD--FPQYMHYFQIKGLEIKGKKYPN-TNWAVGTFLGA---DGMKTGFTCASGFNIV 229
               +  F +       K  +   +   +  N      +     +G K+GFT  +G    
Sbjct: 181 HALQNKEFVKVFEARSYKSSKGNHQWISSLQNAKDNKDMDVSLINGGKSGFTDEAGLTYA 240

Query: 230 ASAIQGDQSLIAVILGALDRNTRN--KVSASL---LSMGFYNKTDRKKINYIIKDFYQQN 284
           ++       LI V   A DR  RN  + +A++   +   F+N    KK   I   +  ++
Sbjct: 241 STMTIDQHRLILVTAKAEDRRKRNHIRDAATVSQYMDQSFHNVVLYKKDEEIDTFWVLKS 300

Query: 285 LSNEVP-NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                     +++    ++ IN +    +   ++       K  
Sbjct: 301 FQGSYQMKAQQDISLLVEKTINKSDLDIQVNIQKWKEAPIYKGD 344


>gi|229163983|ref|ZP_04291922.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
 gi|228619485|gb|EEK76372.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus R309803]
          Length = 273

 Score =  113 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I ++         +   +    Y   +  +TG ++     D    PAS+ K+MT  
Sbjct: 9   FTGMIFLSYAHRQQAVRADQPSITGQYGITIAADTGEILYGKREDERSYPASIAKMMTTL 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        ITI++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITITENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 124 SIAEHIAGSKNEFVKMMNERAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 183

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +      ++ PN              A G K+G +    + +V    +  +
Sbjct: 184 VVLEYMNSTRTTLHTSERSPNIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRTQLYPDTKKMAHYAFQQ 271


>gi|121604627|ref|YP_981956.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Polaromonas
           naphthalenivorans CJ2]
 gi|120593596|gb|ABM37035.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Polaromonas naphthalenivorans CJ2]
          Length = 363

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/272 (19%), Positives = 103/272 (37%), Gaps = 16/272 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++  +I A+      F  ++           K     ++D +T  V+           AS
Sbjct: 74  KRPSIIQALIPAIPSFGQMAGLHSAIDPLDLKSSVALVIDQDTREVLFSKNDHAVLPIAS 133

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVK 114
           LTKLMT  ++       +  +   IT++++  +    + +    G+T++    L L ++ 
Sbjct: 134 LTKLMTGVIISGA----RLPMDEMITVTQDDVDTEKHSRSRLSVGATLSRGEMLHLALMS 189

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S N  A A+  +       FV  MN  +K LG+  T +    G+    + ++A+D+A L 
Sbjct: 190 SENRAAHALGRTYPGGMATFVSLMNAKAKMLGMHDTSYAEPTGL-SSRNQSSAQDLAALV 248

Query: 175 WRIKTDFPQYMHYFQIKGLEI---KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVA 230
                D                  +  ++ NTN  V       G  KTG+   +G  +V 
Sbjct: 249 NAAHGDPVLRELTTSPGYQVAVGSRTLQFNNTNRLVKNPDWDIGLQKTGYINEAGQCLVM 308

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                 + LI V L +  + +R   +  +   
Sbjct: 309 QTKIAGRKLIMVFLDSAGKLSRLGDAERVRRW 340


>gi|282863879|ref|ZP_06272937.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
 gi|282561580|gb|EFB67124.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
          Length = 321

 Score =  113 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 21/264 (7%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
               +       +++  T   +     D      S TK+MTA VV     +K   L + +
Sbjct: 61  PPTPSITAKGGFVMNNGTAKALYSKAADTRRPTGSTTKIMTAKVVL---AQKNLNLDSKV 117

Query: 81  TI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           TI    S        S++    G  +T+   L  L++ S  D A A+A+       +  +
Sbjct: 118 TIQKAYSDYIVSKNASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALADKFGSGSTRAAR 177

Query: 137 ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----- 185
                  MN ++K+LGL  THF +  G+    +Y+T RD+  L+     +          
Sbjct: 178 VKSFIGKMNASAKSLGLKNTHFDSFDGIGSGSNYSTPRDLTKLASNAMKNSTFRTVVKTK 237

Query: 186 ---HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                   K    +   + NTN  +G + GA G+KTG    + + +V +A +  +++I  
Sbjct: 238 STKQKVTTKSGGYRYMAWDNTNPLLGGYSGAIGVKTGSGPTAKYCLVFAATRNGKTVIGT 297

Query: 243 ILGALDRNTRNKVSASLLSMGFYN 266
           +L +   ++R   +  LL  GF  
Sbjct: 298 VLTSSSVSSRTSDAKKLLDYGFKK 321


>gi|311108185|ref|YP_003981038.1| D-alanyl-D-alanine endopeptidase 2 [Achromobacter xylosoxidans A8]
 gi|310762874|gb|ADP18323.1| D-alanyl-D-alanine endopeptidase 2 [Achromobacter xylosoxidans A8]
          Length = 399

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 10/249 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                + A   +     + D  T  VI     +     AS++KLMTA VV          
Sbjct: 139 ASSVRAEAAALRSTTAYVQDLETSTVIFAKNENVVRPIASISKLMTAVVVVDA----NLP 194

Query: 76  LTTPITISKNASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           +   + I+    +     ++  + G+ +T  + L L ++ S N  A A+          F
Sbjct: 195 MDEMLEITDEDVDGLKHTTSRLRVGTKLTRGDMLHLALMSSENRAANALGRHYPGGLPAF 254

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL- 193
           V  MN  ++ LG+++T F+   G+    + ++  D+A L          + +    +   
Sbjct: 255 VAAMNAKAQALGMTSTRFIEPTGL-SSDNVSSPHDLARLLRAASQRPLIHRYSTDTEYDV 313

Query: 194 --EIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
               + + + NTN  V          KTG+   +G  +V  A    + L  V+L +  + 
Sbjct: 314 EVNNRTQTFRNTNLLVRKPDWDIKVSKTGYINEAGECLVMLARINGRDLAIVLLDSQGKL 373

Query: 251 TRNKVSASL 259
           +R   +  +
Sbjct: 374 SRIGDAVRI 382


>gi|225572130|ref|ZP_03780994.1| hypothetical protein RUMHYD_00424 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040396|gb|EEG50642.1| hypothetical protein RUMHYD_00424 [Blautia hydrogenotrophica DSM
           10507]
          Length = 370

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 20/245 (8%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L D ++G V+          PAS+TKLMTA + F   +  K   T  I       E    
Sbjct: 126 LFDLSSGEVLYSKDLYEKVYPASITKLMTAMLAF---QSGKLDSTVTIQQEDLDLESGSQ 182

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
              F  G  +TLD  ++ L+V S ND A AIA  +  +++KFV  MN+ +  LG++ THF
Sbjct: 183 VCGFMVGDQVTLDQLVRCLLVYSGNDAASAIARYVGGSQEKFVAMMNDYAAKLGMTGTHF 242

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG--------------- 197
            N HG+    HYTT  D+  L      ++ +Y+   Q+                      
Sbjct: 243 ENPHGLHTENHYTTVYDIY-LMLNEAMNYSEYLEIAQLSSYTANFEHADGSEASITLEST 301

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVS 256
             Y          +   G KTG T  +G  +         Q  + +++ A  +    +  
Sbjct: 302 DHYLTGETTPPKDVTVLGGKTGTTSDAGNCLALLVQNAYGQPYVCIVMNASTKEILYQQM 361

Query: 257 ASLLS 261
            +LLS
Sbjct: 362 NTLLS 366


>gi|330817668|ref|YP_004361373.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           gladioli BSR3]
 gi|327370061|gb|AEA61417.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           gladioli BSR3]
          Length = 383

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 101/248 (40%), Gaps = 10/248 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D N+   + +         AS++KLMTA VV        A L   
Sbjct: 122 TPDALALRSSVAYVVDQNSSEPLFDKNSRAVVPIASISKLMTAMVVLDSK----ASLDEQ 177

Query: 80  ITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           IT++ ++      + S    GS ++ ++ L + ++ S N  A A++         F+  M
Sbjct: 178 ITVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAAM 237

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +K+LG++ THF N+ G+    + ++ARD+  +                         
Sbjct: 238 NAKAKSLGMTDTHFENSTGLTSL-NVSSARDLVKMIDAAYQYPLIRRFSTDRTYTVFTGK 296

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  V       G  KTGF   +G  +V       + ++ V+L +  + +R  
Sbjct: 297 RSLVYNSTNALVRNPSWDIGLQKTGFINEAGECLVMQTTIHGRPIVMVLLDSFGKYSRVA 356

Query: 255 VSASLLSM 262
            ++ + + 
Sbjct: 357 DASRVRNW 364


>gi|145506951|ref|XP_001439436.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406620|emb|CAK72039.1| unnamed protein product [Paramecium tetraurelia]
          Length = 408

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 115/263 (43%), Gaps = 16/263 (6%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            +I P  S+        + +L+   G +++  +       AS+TK+MT ++     ++  
Sbjct: 145 ISISPIDSVGPLVSAQSWCILNGKNGQLMSGQHQYKSRQMASITKIMTCWLALKLTQQYH 204

Query: 74  AMLT-TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             L  T  T+ + A     + +    G  +++ + L  L++ S ND A++I  +    + 
Sbjct: 205 LDLDNTYFTVPEKAERIGGTTAQLSSGDKLSIRDLLYGLMLPSGNDAAISIQHNFELYKG 264

Query: 133 -KFVQHMNNTSKNLGLSATHFMNAHG----VVQHGHYTTARDMAILSWRIKTD------- 180
             F+Q MN +++++G+  T + N HG    +    +Y++A D+ +L++    +       
Sbjct: 265 CDFIQQMNQSAQDIGMEMTSYSNPHGMNSCLYHEDNYSSAYDIGVLTYNAMQNLQFASIV 324

Query: 181 -FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
               Y    + K  E K   + NTN  +  + G  G+KTG T  +G  +V        S 
Sbjct: 325 KTKIYFSEIEDKFGESKEIFWENTNKML--YQGFRGVKTGITKEAGPCVVEYFEDNQNSY 382

Query: 240 IAVILGALDRNTRNKVSASLLSM 262
           I V+L     + R + +  LL  
Sbjct: 383 IIVLLNCRSVDQRWQDTIKLLDW 405


>gi|295110005|emb|CBL23958.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 378

 Score =  113 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 24/248 (9%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE--Y 89
            LLD     V+          PAS+TK++TA + F         +   +TIS+       
Sbjct: 133 VLLDLKDKSVLFAKGAYERVYPASITKIITALLAFKNS-----NMDDVVTISQENITLEE 187

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                 F++G  +T+D  +  L+V S ND A AIA  +  T + FV  MN  +  LG + 
Sbjct: 188 GSQVVGFQEGDQVTMDQLVHCLLVYSGNDAASAIATHVGGTTENFVSMMNEYAAQLGCTG 247

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------------ 197
           THF N HG+    HYTT  D+ ++      ++P++    Q+    +              
Sbjct: 248 THFTNPHGLQDENHYTTPYDIYLMLKEAL-NYPEFTEITQMPSYTVTFTHSDGSEESVAL 306

Query: 198 ---KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTRN 253
                Y      V   +   G KTG T ++G  +   +        I++++GA  +    
Sbjct: 307 TATDHYLTGEANVPKGVTVLGGKTGTTNSAGNCLALLSQNSYGSPYISIVMGASSKELLY 366

Query: 254 KVSASLLS 261
           +   SLL 
Sbjct: 367 QQMTSLLE 374


>gi|260588732|ref|ZP_05854645.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|331084099|ref|ZP_08333206.1| hypothetical protein HMPREF0992_02130 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540914|gb|EEX21483.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|330402461|gb|EGG82031.1| hypothetical protein HMPREF0992_02130 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 340

 Score =  113 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 13/236 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D     V+A    +    PAS+TK++T  +    L + +  +  P+    
Sbjct: 80  DIYSEAAIVKDVQNNKVLASKNAEERIYPASMTKILTLLIAVEELSDLEEKVQIPVDEVL 139

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
              E   S + F+ G  +++ + L  L++ S  +   A+A  +  +E+ F + MN  +K 
Sbjct: 140 AEYERGASMAGFQPGEKVSVKDLLYGLMLPSGAECCTALACRISGSEEAFAEKMNERAKE 199

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL----------- 193
           LG+  +HF+NA G+ +  HYTT  D+ IL  +   +   +   F  +             
Sbjct: 200 LGMLNSHFVNASGLHEEEHYTTVTDIMILLEQAIKN-ETFYEVFTTRSYTTAPTAAEPNG 258

Query: 194 -EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
              +   Y   +    T     G KTGFT A+G  + + A+   Q  I V  GA  
Sbjct: 259 ITFESTMYDKKSTLEVTDGEILGGKTGFTNAAGQCLASLAMVEGQEYILVTAGADG 314


>gi|295837711|ref|ZP_06824644.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. SPB74]
 gi|197695913|gb|EDY42846.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces sp. SPB74]
          Length = 308

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 104/250 (41%), Gaps = 19/250 (7%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            LLDT++G  +     D     AS TK+MTA VV            T     ++      
Sbjct: 43  YLLDTSSGKALYSKAADTKREMASTTKVMTAAVVLDTKGLNLDKKVTIQQAYRDYVVKKG 102

Query: 92  SNS-TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ------HMNNTSKN 144
           +++   + G  +T+   L   ++ S  D A A+A++    +    +       MN  +K+
Sbjct: 103 ASTADLRTGDKVTVRQLLYAALLPSGCDAAYALADTFGTGKTATARTADFIAKMNAKAKS 162

Query: 145 LGLSATHFMNAHGVVQH-GHYTTARDMAILSWRIKTDFPQYM--------HYFQIKGLEI 195
           L ++ T + +  G+     +YTT RD ++L+     +                       
Sbjct: 163 LKMANTSYDSFDGIPTKSKNYTTPRDASLLAQHALKNSTFRTVVKAKSTKQTATASNGNT 222

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           +   + NTN  +G++ GA G+KTG    SG  +V +A +  +++  VIL     + R + 
Sbjct: 223 RTYTWYNTNKLLGSYDGAIGIKTGTASGSGPCLVFAATRHGRTVAGVILN---DSNRFED 279

Query: 256 SASLLSMGFY 265
           +A ++   F 
Sbjct: 280 AAKIMDYAFK 289


>gi|83644147|ref|YP_432582.1| D-alanyl-D-alanine carboxypeptidase [Hahella chejuensis KCTC 2396]
 gi|83632190|gb|ABC28157.1| D-alanyl-D-alanine carboxypeptidase [Hahella chejuensis KCTC 2396]
          Length = 313

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 111/282 (39%), Gaps = 25/282 (8%)

Query: 1   MRQFLVIIAMAMLSNIF-------------PFLSIAETNKLPYYTLLDTNTGHVIAENYP 47
           M+  L+ +++   S++                 +   +       ++D  +G  +    P
Sbjct: 1   MKNILIALSLLFCSSVVLADSETTLPENLQSLDTANISLGSVNAKVVDVESGVTLFAKNP 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS-TFKKGSTMTLDN 106
           +     AS++KLMTA VV          L   +TI++   +   +     + G+ +    
Sbjct: 61  ETVAPIASISKLMTAMVVLDAE----LPLDEMLTITEEDIDTWKNTYSRMRIGAVLPRSE 116

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L L ++ S N  A+A+  +       FV  MN+ ++ LG+  T F+   G+    + +T
Sbjct: 117 LLLLALMSSENRAALALGRTYPGGMTAFVSAMNDKARALGMRNTRFVEPSGL-SMENVST 175

Query: 167 ARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGF 220
           A D+  +      +++  D+     Y    G      ++ NTN  V       +  KTGF
Sbjct: 176 ASDLVKMVSTASRYKLIRDYTTTPSYMIKLGETENEMEFRNTNLLVRQGDWGVNLSKTGF 235

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
              +G  +V  A  G++ +  V+L +  R T    +  +   
Sbjct: 236 INEAGRCLVMLANVGERPVAMVLLDSYGRRTPVGDANRIKQW 277


>gi|229014198|ref|ZP_04171319.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
 gi|228747152|gb|EEL97034.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
          Length = 301

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQVVRADQPNITGQYGITIDADTGEILYGKREDERSYPASIGKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 97  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 151

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 152 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKESLKYP 211

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +   I        +  K  N           A G K+G +    + +V    +  +
Sbjct: 212 IVLEYMNSIHTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 271

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 272 RVINVVL-SSTRTQLYPDTKKMAHYAFQQ 299


>gi|330960895|gb|EGH61155.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 311

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 102/265 (38%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +++ A  +N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  VLSTATFANETAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  VVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPML 193

Query: 183 QYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y     NT+  V          KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKTVTFRKPTYTLGFSNTDHLVHKDNWDIKLTKTGFTNQAGHCLVLLTTMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|332522835|ref|ZP_08399087.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332314099|gb|EGJ27084.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 412

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 130/349 (37%), Gaps = 31/349 (8%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
                   L+ A           + +TG ++ E         ASL+K++T Y+V+  ++ 
Sbjct: 13  FYFLPKVTLAEAYKLPARSGIAFEVSTGKILYEKDAKKKLPIASLSKVLTTYLVYKEVQS 72

Query: 72  KKAMLTTPITISKNASE---YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                 TP+ IS    E       ++        T++  L  ++V +AN  A+A+AE + 
Sbjct: 73  GNLSWDTPVKISNYPYELTANYSISNVPLDARQYTVEELLTAMLVTNANSPAIALAEKIS 132

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILS 174
            TE  FV  M    ++  +   + +NA G+                  +  +A D+AI++
Sbjct: 133 GTEPLFVDKMQKQLRDWKIHKANLVNASGLSNEQLGNHIYPNSQKDAENKMSALDLAIVT 192

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVA 230
             +  DFPQ +   +      +G +  + N+ +        GA+G+   F+  +G +++ 
Sbjct: 193 RHLLQDFPQVLELTKKPAATFRGDRIFSYNFLLEGMPNHRIGANGLFVAFSENNGASLIT 252

Query: 231 SAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYI------IKDF 280
           S+I+   S++++IL       ++      + +LL            +             
Sbjct: 253 SSIENKMSVVSIILNTEEVKDNKLAHFTTANTLLDNIAQKYEPVTLLRKGQILKNKTLPV 312

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
               +        + +   QK     NT +  +  ++      ++   L
Sbjct: 313 IDSPIKQVSLTSDKTLTVIQKRGTTTNTDLVISPLQKECRAPIKQKQKL 361


>gi|310779537|ref|YP_003967870.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ilyobacter
           polytropus DSM 2926]
 gi|309748860|gb|ADO83522.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ilyobacter
           polytropus DSM 2926]
          Length = 368

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 66/339 (19%), Positives = 127/339 (37%), Gaps = 16/339 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           R+  + +++ +    F               + D +   +            AS+TK+MT
Sbjct: 3   RKIGIFLSVILFLTTFS------NEDYTSLLVGDKDEN-IYYSENLHEKHPLASVTKMMT 55

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             VV+  ++ K   L   + IS  A     S     +GS +T+ + LK   + SAN+ A 
Sbjct: 56  VMVVYDHIRNKDISLEDRVEISPEARSVGGSMIWIAQGSKLTVRDLLKATAIYSANNAAY 115

Query: 122 AIAESL-CKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A+AE +       FVQ MN  +++LGL     F    G+              L     +
Sbjct: 116 ALAEYIGKGDVDFFVQLMNQKAEDLGLGDEVEFYTPMGLPPSMTGKPMDRGTALGIYKLS 175

Query: 180 DFPQYMHYF------QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                   +      +   ++   ++  N N  +    G  G+KTG    +G+NI  +A 
Sbjct: 176 LEALKYPEYITIASLKEDFIQDGTQRIVNRNKLLSKENGVFGIKTGHHSKAGYNISIAAK 235

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           + + + I ++ G+     R+K  A  L   +      K I+        + +  +   + 
Sbjct: 236 RDEVTTITIVFGSPKEEIRDKTVADSLDKFYDEYHLEKLIDTSKPMIEIEVVHGKKDVVQ 295

Query: 294 EEVCTTQKEIINYNTQMKEAKD-KESHFIDFEKITLLKN 331
                  +++I+ N  ++  K   +S     EK  +L +
Sbjct: 296 GYPDEEFEQLISKNWGVETRKTYIKSIEAPVEKGRILGS 334


>gi|269122125|ref|YP_003310302.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sebaldella
           termitidis ATCC 33386]
 gi|268616003|gb|ACZ10371.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sebaldella
           termitidis ATCC 33386]
          Length = 357

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 118/342 (34%), Gaps = 16/342 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M+  ++ + + +   IF +             L+    G++  ++        AS+TK+M
Sbjct: 1   MKTKILSLMLLLSVFIFSYDYKE--------LLVGDTKGNIYVQDNIYEVRPLASMTKVM 52

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +    +  K+  L   +TIS  AS+ P         +    +      I  S N   
Sbjct: 53  TILLTLDKVNAKEISLDDNVTISYTASKVPYGVKMNAGETFTVEELLKATAIRSSNNAAY 112

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
                        FV  MN  ++++GL +  +   HG+      T               
Sbjct: 113 ALAEYVSHGDVYDFVDKMNERARSMGLDSLRYCTPHGLPPGNTGTCMDQGNAYDIYKLAM 172

Query: 181 FPQYMHYF------QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                  +          ++    +   TN  +G   G DG+KTG+  A+G NIV +A +
Sbjct: 173 TAIQYPEYMKIADKSSDYIKDGTIQLKATNNLLGKVEGVDGLKTGYHKAAGSNIVLTAER 232

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
               +IAV++G+     R+ V A  ++  F      K ++        +  + +      
Sbjct: 233 DGLRMIAVVMGSEKSKNRDTVGADEINSFFSTYKKSKIVDTNKAIATIKISNKDYSLYPS 292

Query: 295 EVCTTQKEIINYNTQMKEAK--DKESHFIDFEKITLLKNKIT 334
           E       I N++    E K    ++     +   +L +   
Sbjct: 293 EDVEEIININNFDASKIEYKFNVIKTLPRKIKNGEVLGDYTV 334


>gi|229062677|ref|ZP_04199986.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|228716647|gb|EEL68344.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
          Length = 290

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 26  FTGMIFFSYAHRQQVVRADQPNITGQYGMTIDADTGKILYGKREDERSYPASIAKMMTTL 85

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +     +    + G  +  D ALKL+++ SA+ IA 
Sbjct: 86  LLLENVKE-----DEEITVTENAIKTESQSAKIKLRAGEKLKRDEALKLMLIISADPIAE 140

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  +++KFV+ MN  +K +G     F NA G    G+  +  D+AI++       
Sbjct: 141 SIAEHIAGSKEKFVKMMNARAKEIGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 200

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +       +  K  N           A G K+G +    + +V    +  +
Sbjct: 201 IVLDYMNSTRTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 260

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  + +  F  
Sbjct: 261 RVINVVL-SSTRTQLYPDTKKMANYAFQQ 288


>gi|307331360|ref|ZP_07610480.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
 gi|306882983|gb|EFN14049.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
          Length = 293

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 22/257 (8%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               +++  TG  +     D   +  S TK+MTA VV +        L   +T+ K  S+
Sbjct: 40  KGGFVMNNGTGKSLFTKAADTRRSTGSTTKIMTARVVLAQP---NLNLDAKVTVQKAYSD 96

Query: 89  YPPSNSTFK-----KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ------H 137
           Y   N+         G  +T+   L  L++ S  D A A+A+       +  +       
Sbjct: 97  YIVDNNWASSAKLIVGDKVTVRQLLYGLMLPSGCDAAYALADKFGTGSTRAARVKSFIGK 156

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARD--------MAILSWRIKTDFPQYMHYFQ 189
           MN T+K+LGL+ THF +  G+ +  +Y+T RD        M   ++R             
Sbjct: 157 MNTTAKSLGLTNTHFDSFDGIGRGANYSTPRDLTKLASSAMKYSTFRTVVKTKSTKQKVT 216

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            K    +   + NTN  +G++ G  G+KTG    + + +V +A +  +++I  +L +   
Sbjct: 217 TKSGGYRYMSWTNTNNLLGSYSGTIGVKTGSGPEAKYCLVFAATRNGKTVIGTVLASSSV 276

Query: 250 NTRNKVSASLLSMGFYN 266
           + R   +  ++  GF  
Sbjct: 277 DARTADAKKIMDYGFKQ 293


>gi|237747720|ref|ZP_04578200.1| D-alanyl-D-alanine-endopeptidase [Oxalobacter formigenes OXCC13]
 gi|229379082|gb|EEO29173.1| D-alanyl-D-alanine-endopeptidase [Oxalobacter formigenes OXCC13]
          Length = 397

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 101/247 (40%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                + +     ++D +   ++ E   +     AS+TKLMTA VV   ++     +   
Sbjct: 135 TPDPLSLRSNAALIVDESKLEILFEKNANIALPMASVTKLMTALVVVESMQ----DMNEI 190

Query: 80  ITISKNASEYPPSN-STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           + I+++  +      S  K G+ M+  N L L ++ S N  A A+  +     K FV  M
Sbjct: 191 LEITQDDVDMLKHTGSRLKVGTRMSRGNLLHLALMSSENRAAAALGRNYPGGLKGFVSAM 250

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  ++ LG+S ++++++ G+      +      ++    +    +         ++    
Sbjct: 251 NIKAQVLGMSDSNYVDSSGLSSGNVASARDLAKLVMAASQYPILRKYSTDTHYSVDDGLH 310

Query: 199 --KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             +Y +TN  V          KTG+   +G  +V  AI   + ++ V L +  + +R   
Sbjct: 311 QLQYGSTNALVHNPNWQIQLQKTGYISEAGQCLVMKAIIDGRPIVMVFLDSKGKGSRIAD 370

Query: 256 SASLLSM 262
           +  + + 
Sbjct: 371 AQRIRNW 377


>gi|229169729|ref|ZP_04297429.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228613768|gb|EEK70893.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
          Length = 301

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQVVRADQPNITGQYGITIDADTGKILYGKREDERSYPASIAKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 97  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 151

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN+ +K LG     F NA G    G+  +  D+AI++       
Sbjct: 152 SIAEHIAGSKNEFVKMMNSRAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 211

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +   I        +  K  N           A G K+G +    + +V    +  +
Sbjct: 212 IVLEYMNSIHTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 271

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 272 RVINVVL-SSTRTQLYPDTKKMSHYAFQQ 299


>gi|329119331|ref|ZP_08248017.1| D-alanyl-D-alanine carboxypeptidase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464476|gb|EGF10775.1| D-alanyl-D-alanine carboxypeptidase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 314

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 11/250 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                         +L+  TG V+ +   +     AS++KLM+A V        +  +  
Sbjct: 63  AAIAGPLLASQSALILNNRTGEVLYQKNMNRVMPIASISKLMSAMVTLDA----RLNMNE 118

Query: 79  PITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI+++       + S    G+ +T    L L ++ S N    A+  +       FV  
Sbjct: 119 VITITEDEIDRIKGTGSRLSIGTQLTRAQLLHLSLMSSENRATHALGRTYPGGMAAFVAA 178

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-- 195
           MN  +++LG++ + F    G+  + + +TA D++ +            +     G     
Sbjct: 179 MNAKAQSLGMADSRFYEPTGL-DYRNVSTASDLSKMVAAAAKYPQIRSNSTSTYGSVYTS 237

Query: 196 --KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
             + + Y N+N  V       +  KTG+   SG ++V  A  G + +  V+L +    TR
Sbjct: 238 AGRQQNYKNSNALVREGTWDIELQKTGYIRESGRSMVVKARIGSEPVTIVLLNSPTTTTR 297

Query: 253 NKVSASLLSM 262
              + S+ S 
Sbjct: 298 VNDARSIQSW 307


>gi|257126624|ref|YP_003164738.1| serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia buccalis
           C-1013-b]
 gi|257050563|gb|ACV39747.1| Serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia buccalis
           C-1013-b]
          Length = 422

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 16/323 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           VI +MA L+      +     +     L+    G++I E+        AS+TK+MT+ + 
Sbjct: 12  VIFSMAFLALSSLSFADGADYRDYKALLIGDVNGNIIKEDNSLAVRPLASVTKIMTSILT 71

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              +K         +T+S  A+   P       G   T+ + LK  I+KS+N+ A A+AE
Sbjct: 72  LDKIKSGMISYDDKVTVSSKAASV-PYGIKLTAGKQYTVRDLLKATIIKSSNNAAYALAE 130

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT-----ARDMAILSWRIKTD 180
            +      FVQ MN  +++ GL +  + + HG+      +      A+D+  L+     D
Sbjct: 131 YVGGNVPNFVQSMNEKARSYGLESLRYCSPHGLPPSYTGSCMDQGNAKDLYKLAQITVKD 190

Query: 181 FPQYMHY--FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
           + +Y+++   +   ++    K  +TN  +G  LG DG+KTG+  A+G NIV +A +G + 
Sbjct: 191 YSEYLNFSKNKTDYVDNGNTKVTSTNSLLGNVLGVDGIKTGYHNAAGSNIVLTADRGGER 250

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           +IA+ILG+     RN +    ++  + N   RK  NY        N +N           
Sbjct: 251 MIAIILGSNRAKDRNAIGTKEINDYYANGYARKNKNY--------NTNNVASATHAVDSY 302

Query: 299 TQKEIINYNTQMKEAKDKESHFI 321
              E  N NT  +  + K+ +FI
Sbjct: 303 DNIETYNANTSKETKEPKKDNFI 325


>gi|325830849|ref|ZP_08164233.1| serine-type D-Ala-D-Ala carboxypeptidase [Eggerthella sp. HGA1]
 gi|325487256|gb|EGC89699.1| serine-type D-Ala-D-Ala carboxypeptidase [Eggerthella sp. HGA1]
          Length = 347

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 66/275 (24%), Positives = 103/275 (37%), Gaps = 32/275 (11%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    L+D + G +      D     ASLTK+MTA V            +T I ++
Sbjct: 54  PDLDASCAALMDED-GTLWFGRNADDAAQIASLTKIMTAIVAAD-----WLDASTMIEVT 107

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND--------------IAVAIAESLCK 129
             A+    S++   +G +MT D+ALK L+  S ND                         
Sbjct: 108 PEAASVGESSAGLAQGDSMTFDDALKALLTASGNDAASAIAQAAGARMLAQKGSGGDAYA 167

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKT----DF 181
            E  FV+ MN  +  LGL  + F N HG+       G Y+ A D+A +            
Sbjct: 168 CEAAFVEAMNAKAAELGLENSFFANPHGLDFDAFAQGQYSCAADVATMLRAAMQIDLVRA 227

Query: 182 PQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQ 237
                   I              NT+  +G++ GA   KTG+T A+G     +  +    
Sbjct: 228 NIGFSQADITVQRDGAPVTLALENTDALLGSYPGACAAKTGYTLAAGPCAATAVNRGDGH 287

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
              AV+LG+  +  R   SA+L    + N++  + 
Sbjct: 288 EYYAVVLGSSSKPQRFVDSAALYDWAYANRSSLRA 322


>gi|163942729|ref|YP_001647613.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
 gi|163864926|gb|ABY45985.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus
           weihenstephanensis KBAB4]
          Length = 279

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FTGMIFFSYAQRQQVVRADQPNITGQYGITIDADTGEILYGKREDERSYPASIGKMMTTL 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 75  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 130 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 189

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQ 237
               +   I        +  K  N           A G K+G +    + +V    +  +
Sbjct: 190 IVLEYMNSIHTTLHTSERSPKIANYGREELYDDSYAIGSKSGLSALGKYTVVTVDEKDGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 250 RVINVVL-SSTRTQLYPDTKKMAHYAFQQ 277


>gi|224826640|ref|ZP_03699741.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Lutiella
           nitroferrum 2002]
 gi|224601241|gb|EEG07423.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Lutiella
           nitroferrum 2002]
          Length = 290

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 9/254 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +   ++ A         +L+   G  + +   D P   AS+TKLMTA V         
Sbjct: 30  IQVAANMTGAPHLNSHTVLVLNGANGEALYQKNTDLPLPFASITKLMTAMVTLDAG---- 85

Query: 74  AMLTTPITISKNASEYPPS-NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             +  PITI++N  +   + +S    G+T+     L L ++ S N  A A+A +     +
Sbjct: 86  LSMDEPITITENEIDRLKNTSSRLSVGTTLPRREMLLLALMSSENRAAAALARTYPGGTQ 145

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT---ARDMAILSWRIKTDFPQYMHYFQ 189
            FV  MN  ++ LG++ T F +  G+      T    AR +   +              +
Sbjct: 146 AFVAQMNRKARALGMNNTVFYDPTGLEVRNTATAMDLARMVRAANGYPLIRTFTTTQEHE 205

Query: 190 IKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
           +     +   Y N+N  V          KTG+   +G  +V     G Q LI V+L A  
Sbjct: 206 VMSGSRRMLHYKNSNALVREGDWDISLQKTGYIQEAGRCMVLQTTVGSQPLIIVLLAAGA 265

Query: 249 RNTRNKVSASLLSM 262
            + R   + ++ + 
Sbjct: 266 PSARVSDARAIRNW 279


>gi|288576057|ref|ZP_05978110.2| penicillin-binding protein 7 [Neisseria mucosa ATCC 25996]
 gi|288566309|gb|EFC87869.1| penicillin-binding protein 7 [Neisseria mucosa ATCC 25996]
          Length = 313

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 95/246 (38%), Gaps = 10/246 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                      + +  TG ++ +   D     AS++KLM+A +V       +  +  PIT
Sbjct: 67  AGPLLTSQAALIFNNKTGEILYQKNADRVMPIASISKLMSAMIVLDA----RLDMNEPIT 122

Query: 82  IS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           I+         + S    G+T+T    L L ++ S N    A+  +       FV  MN 
Sbjct: 123 ITADEIDRLKGTGSRLAIGTTLTRGELLHLSLMSSENRATHALGRTYPGGMSAFVAAMNA 182

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---KG 197
            +++LG+ ++ F    G+    + +TA D+  +            +     G        
Sbjct: 183 KAQSLGMYSSRFYEPTGL-NFQNVSTANDLNRMVAAASKYPLINKNSTSNYGSVWTANGR 241

Query: 198 KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
           + Y N+N  V       +  KTG+   +G ++V  A   +Q +  V+L +    TR   +
Sbjct: 242 QNYKNSNALVREGSWNIELQKTGYIREAGRSMVVKANVQNQPITIVLLNSPTSTTRVNDA 301

Query: 257 ASLLSM 262
             + S 
Sbjct: 302 RKIESW 307


>gi|257092407|ref|YP_003166048.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257044931|gb|ACV34119.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 417

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 8/242 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   ++  + G  + E         AS+TK+MTA VV          L  PITIS 
Sbjct: 166 AVHSGSALVVPQDGGEPLYEKNAHAVVPIASITKVMTAMVVLDSQP----NLQAPITISD 221

Query: 85  NASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +  +Y   S S  + GS +  + AL L ++ S N  A A+          FV  MN  + 
Sbjct: 222 DDVDYLRGSRSRLQVGSVIPRETALLLALMSSENRAANALGRHYPGGLTAFVAAMNRKAA 281

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK--YP 201
           +LG++ +HF +  G+  +   T      +++   +    +          EI G++  + 
Sbjct: 282 SLGMTRSHFEDPTGLNSNNVSTAHDLARMVAAAHRYPLIREFSTTSGARAEINGRELGFH 341

Query: 202 NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           NTN  V +     G  KTG+   +G  +V  A   D+ ++ V+L +  + TR   +  + 
Sbjct: 342 NTNQLVSSPTWEIGLSKTGYIQEAGKCLVMQARVADKPVVIVLLDSAGKQTRIGDANRIK 401

Query: 261 SM 262
             
Sbjct: 402 RW 403


>gi|330444090|ref|YP_004377076.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila pecorum E58]
 gi|328807200|gb|AEB41373.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila pecorum E58]
          Length = 429

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 69/357 (19%), Positives = 121/357 (33%), Gaps = 42/357 (11%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + + S+ F   S   T       L   +TG V+     D    PAS+TK+ TA  +    
Sbjct: 12  LWLCSSCFGAHSFPSTRGTSTAIL-HADTGKVLYGENLDLRIYPASMTKIATALFILQRH 70

Query: 70  KEKKAMLTTP-----------------ITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            E    L T                       +  E        +    ++  +    L+
Sbjct: 71  PEVLERLVTVTRDAIVSITPQAKKQSGYRNPPHWLETDGVTIQLQAKEEVSGWDLFHALL 130

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAND A  +A + C +  K ++ +N     LG   THF N HG+    HYTTARD+A 
Sbjct: 131 LSSANDAANVLAVACCGSVAKCMEQINLFLSELGCKHTHFNNPHGLHHPNHYTTARDLAT 190

Query: 173 LSWRIKTDFP-------QYMHYFQIKGLEIKGKKYPNT---NWAVGTFLGADGMKTGFTC 222
           +      +          +           +     N      ++  +  A G KTG T 
Sbjct: 191 IMHHALQETKFQQVIKTTHYTMAATNLSAERSLTTTNKLMLPRSMYYYPAALGGKTGTTK 250

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
           ++G N+V +A + ++ +I V  G         +   +L    F+    RK +    + + 
Sbjct: 251 SAGKNLVMAAQKNNRKIITVTTGYSGPVGELYQDVIALCEALFHEPLLRKYLISPKESYT 310

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD-------KESHFIDFEKITLLKN 331
            +  +         +     E + Y+    E            +  +   +  LL  
Sbjct: 311 LKIKNL------GNITIPLSEGVYYDFYASEKDPMLSVSFLPTTQPLPIHRGELLGE 361


>gi|238923987|ref|YP_002937503.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
 gi|238875662|gb|ACR75369.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
          Length = 384

 Score =  112 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 107/276 (38%), Gaps = 19/276 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ + + A   ++                  L D +    I           AS TKL+T
Sbjct: 57  KKSVFMAAENTVAKNTDKAVNEPRLHAVSAALYDADDETFIYGRNMRDSMANASTTKLLT 116

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             V           +   +TIS+NA+  P        G++  + + L  ++++S ND A 
Sbjct: 117 CIVALEKSD-----INDTVTISQNAASQPAVKLGLVAGNSYNMKDLLYGMMLESFNDCAY 171

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRI 177
           AIAE +  + + F + MN  +  +G   T+F+  +G+        H++TA D+ ++    
Sbjct: 172 AIAEHVGGSTEGFAKLMNEKANEIGCLGTYFITPNGLDAENDISFHHSTAGDLCVIMSYC 231

Query: 178 KTDFPQYMHYFQIKGLEI-------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
               P+   + +I                + N N  +         KTGFT  +G+  VA
Sbjct: 232 AWKSPKSTQFLEITQTMQYTFETEEGKMVFNNHNRLLTETDYCISGKTGFTAKAGYCYVA 291

Query: 231 SAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMG 263
           +  +  + +   +LG     ++N +   + SL+   
Sbjct: 292 AVEKDGRRMCLSLLGCGWPNNKNYKWADAKSLVEYA 327


>gi|63256357|gb|AAY37453.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Pseudomonas
           syringae pv. syringae B728a]
 gi|330973126|gb|EGH73192.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 294

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 8/253 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
            +                ++D  T  V+  + PD     AS+TKLMTA VV    +    
Sbjct: 12  AVLSRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDE 71

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           ++   I+ +          S  K GS M   + L + ++ S N  A ++A S       F
Sbjct: 72  VIPVNISQTPE---MKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAF 128

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           +  MN  +K LG+  T ++   G+  +   T      ++    K      +   + K + 
Sbjct: 129 ILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVT 188

Query: 195 IKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +   Y     NT+  V          KTGFT  +G  +V      ++ +  VIL A  +
Sbjct: 189 FRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGK 248

Query: 250 NTRNKVSASLLSM 262
            T    ++ +   
Sbjct: 249 YTHFADASRIRKW 261


>gi|171463757|ref|YP_001797870.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171193295|gb|ACB44256.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 338

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 99/241 (41%), Gaps = 8/241 (3%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K     +++ +T  V  E  P      AS+TKLMTA VV       K  L   I I+ 
Sbjct: 88  NLKSSVAMVVNQDTKEVYFEKNPSVSLPIASITKLMTAMVVLDS----KLPLDEAIVINA 143

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +      ++     G+ +T + AL L ++ S N  A  +  +       FV  MN  +K 
Sbjct: 144 DDIHIYRTSRLAG-GTVLTREEALLLALMSSENRAAYTLGRNYPGGIPAFVDAMNRKAKE 202

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ--IKGLEIKGKKYPN 202
           LG++ +HF +  G++     T      +L+   +    +    +      +  + +K+ N
Sbjct: 203 LGMNHSHFADPTGLMSENVATAEDLTRMLNAAYQYKMIREFSTWPDLTMVIAKRPQKFLN 262

Query: 203 TNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           TN  V +     G  KTGF  A+G  +V  A   +  L+ V L ++   +R   +  +  
Sbjct: 263 TNRLVRSGDMNIGLQKTGFINAAGKCLVMQARVNNTPLLLVFLDSVGTQSRFADAVRVRD 322

Query: 262 M 262
            
Sbjct: 323 W 323


>gi|161486731|ref|YP_235491.2| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. syringae
           B728a]
          Length = 313

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 94/253 (37%), Gaps = 8/253 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
            +                ++D  T  V+  + PD     AS+TKLMTA VV    +    
Sbjct: 31  AVLSRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDE 90

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           ++   I+ +          S  K GS M   + L + ++ S N  A ++A S       F
Sbjct: 91  VIPVNISQTPE---MKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAF 147

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           +  MN  +K LG+  T ++   G+  +   T      ++    K      +   + K + 
Sbjct: 148 ILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVT 207

Query: 195 IKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +   Y     NT+  V          KTGFT  +G  +V      ++ +  VIL A  +
Sbjct: 208 FRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGK 267

Query: 250 NTRNKVSASLLSM 262
            T    ++ +   
Sbjct: 268 YTHFADASRIRKW 280


>gi|300310973|ref|YP_003775065.1| D-alanyl-D-alanine-endopeptidase [Herbaspirillum seropedicae SmR1]
 gi|300073758|gb|ADJ63157.1| D-alanyl-D-alanine-endopeptidase (penicillin-binding) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 366

 Score =  112 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 98/248 (39%), Gaps = 8/248 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                   +     ++D     V+ E         AS+TKLMTA VV    +  + +LT 
Sbjct: 103 LTPDPLALRSNVALVIDQANSQVLFEKNSGVALPIASVTKLMTALVVVEARQNMEEVLTV 162

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +      S+S  + G+T++ D+ L + ++ S N  A A+  +       FV  M
Sbjct: 163 TD---DDVDREKHSSSRLRVGATLSRDDMLHIALMSSENRAASALGRNYPGGLPAFVAAM 219

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EI 195
           N  +++LG+  T ++++ G+    +  +ARD+A L            +    K +     
Sbjct: 220 NAKARSLGMMDTRYVDSTGL-SSQNVASARDLAKLVVAAYNYPIIRQYSTDPKYMVEPSG 278

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
              +Y ++N          G  KTGF   +G  +V       + ++ V L +  R +   
Sbjct: 279 HALQYNSSNRLTSNKEWDIGLQKTGFINEAGHCLVMYTRIEGRPIVMVFLDSKGRLSHVG 338

Query: 255 VSASLLSM 262
            +A +   
Sbjct: 339 DAARMRKW 346


>gi|253732917|ref|ZP_04867082.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253729097|gb|EES97826.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 414

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 77/338 (22%), Positives = 136/338 (40%), Gaps = 38/338 (11%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 40  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 99

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 100 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 159

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 160 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 219

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 220 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 279

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYII-----KDFYQQNLSNEV-----PNISEEVCT 298
              RN +  +L+   F      K ++        K +Y +N   +V          ++  
Sbjct: 280 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVENDLYDVLPSDFSKKDYKLVV 339

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              ++     +    KD     ++  K  + K     K
Sbjct: 340 EDGKVHADYPREFINKDYGPPTVEVHKPIIQKANTVAK 377


>gi|163857870|ref|YP_001632168.1| D-alanyl-D-alanine carboxypeptidase [Bordetella petrii DSM 12804]
 gi|163261598|emb|CAP43900.1| probable D-alanyl-D-alanine carboxypeptidase [Bordetella petrii]
          Length = 385

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 10/244 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +  E  +     + D  T  V+     +     AS++KLMTA VV    +     +   +
Sbjct: 134 AEIEALRSSTAYVQDLETSTVLFAKNDNVVRPIASISKLMTALVVVDANQP----MDQML 189

Query: 81  TISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            I+ +  +    ++S    G+ ++  + L L ++ S N  A A+  +       FV+ MN
Sbjct: 190 EITDDDVDTLKHTSSRLVVGTRLSRGDMLHLALMSSENRAAHALGRNYPGGLPAFVEAMN 249

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE---IK 196
           + ++ LG+++THF+   G+    + ++ RD+A L          + +    +       +
Sbjct: 250 HKARALGMTSTHFIEPTGL-SSQNVSSPRDLARLLRAASQRPLIHRYSTDDQYEVDVANR 308

Query: 197 GKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
            + + NTN  V          KTG+   +G  +V  A    + +  V+L +  + +R   
Sbjct: 309 TQVFRNTNLLVRKPDWDIKVSKTGYINEAGECLVMLARINGRDVAMVLLDSQGKLSRIGD 368

Query: 256 SASL 259
           +  L
Sbjct: 369 AVRL 372


>gi|82408083|pdb|2BCF|A Chain A, Crystal Structure Of A Evolved Putative Penicillin-Binding
           Protein Homolog, Rv2911, From Mycobacterium Tuberculosis
          Length = 276

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 91/250 (36%), Gaps = 14/250 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + D ++G V+A    +    PAS  K++ A V           L + +   
Sbjct: 15  PDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDE-----LDLNSTVVAD 69

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              ++   +    K G + T+   L  L++ S ND A  +A      +   V   N  + 
Sbjct: 70  VADTQAECNCVGVKPGRSYTVRQLLDGLLLVSGNDAANTLA-HXLGGQDVTVAKXNAKAA 128

Query: 144 NLGLSATHFMNAHGVVQHGHY--TTARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGK 198
            LG ++TH     G+   G    +TA D+ ++      +                +   +
Sbjct: 129 TLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRAAXANPVFAQIIAEPSAXFPSDDGEQ 188

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKV 255
              N +  +  + GA G KTG+T A+    V +A +G + L+             T    
Sbjct: 189 LIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAXXYGLVKEGGPTYWDQ 248

Query: 256 SASLLSMGFY 265
           +A+L   GF 
Sbjct: 249 AATLFDWGFA 258


>gi|222150410|ref|YP_002559563.1| penicillin-binding protein 4 [Macrococcus caseolyticus JCSC5402]
 gi|222119532|dbj|BAH16867.1| penicillin-binding protein 4 [Macrococcus caseolyticus JCSC5402]
          Length = 429

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/364 (17%), Positives = 141/364 (38%), Gaps = 50/364 (13%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN------------KLPYYTLLDTNTGHVIAENYPDH 49
           R F   I    L +                             ++    G V+  +  D 
Sbjct: 6   RVFSFSICFLFLFSYKALAKEPYEIANDAGNYIDASYNPKGTIVIAQKNGQVLYSDDADT 65

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTLD 105
            W  AS++KLMT Y++   + + +    T + ++            SN+  +  +  T+D
Sbjct: 66  KWPLASMSKLMTLYLLLQEMDKGEITFNTKVKVTDKFYNISKLPALSNNNLRLNAVYTVD 125

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH---- 161
             + +++  S+N     ++  + K + +F+  MN  +K LG+++T F N  G   +    
Sbjct: 126 ELMPIMLTNSSNAATYMLSSLVTKNDSEFIDKMNQEAKRLGMNSTKFYNPVGAPNNLLNE 185

Query: 162 ----------GHYTTARDMAILSWRIKTDFPQYMHYFQ-----IKGLEIKGKKYPNTNWA 206
                      + ++A+D AIL   + +++P  + Y +     +K   I  + +   N +
Sbjct: 186 YKAKKYPQNEDNISSAKDYAILCQHLVSEYPGILKYTKRVDVTVKKGTIDEETFHTYNHS 245

Query: 207 ----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------RNKVS 256
                  + G DG+KTG +  +GFN   +  + D  +I V++G            RN ++
Sbjct: 246 LEGAKLGYKGVDGLKTGSSDTAGFNTAITGKKNDMRIIQVMMGVESWYDPPAEFNRNIMA 305

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
            +++   +     +K +   +       ++ +   +  ++    K+ +  + Q K+ K  
Sbjct: 306 NAIMDEVYNEYAYKKVLAKGVHT-----INGQELYVHSDLYDIVKKDVKGSFQFKDGKLS 360

Query: 317 ESHF 320
             + 
Sbjct: 361 YHYK 364


>gi|167574898|ref|ZP_02367772.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           oklahomensis C6786]
          Length = 373

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 8/244 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S     +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 113 TSRPSGLRSNIAYMIDPHTGETLFDRNSQSVVPIASVTKLMTAMVVLDSKAP----LEER 168

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     ST++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 169 IEVTDDDRDQDKFTGSRLAIGSTLSRDDMLHIALMASENRAAAALSRYYPGGRQAFVDAM 228

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +++LG+  THF N  G+ ++   T      ++    +    +         ++   +
Sbjct: 229 NQKARSLGMIDTHFENPTGLSKYNVSTARDLAKMVEAAYQYPLIRQYSTDLKYEVDTGRR 288

Query: 199 K--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++    
Sbjct: 289 TLYYHSTNILLRDEDWDIGVQKTGYIRESGICLVMQTTIDGREVVMVLLDSAGRHSDFFD 348

Query: 256 SASL 259
           +A L
Sbjct: 349 AARL 352


>gi|167565134|ref|ZP_02358050.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           oklahomensis EO147]
          Length = 373

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 8/244 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S     +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 113 TSRPSGLRSNIAYMIDPHTGETLFDRNSQSVVPIASVTKLMTAMVVLDSKAP----LEER 168

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     ST++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 169 IEVTDDDRDQDKFTGSRLAIGSTLSRDDMLHIALMASENRAAAALSRYYPGGRQAFVDAM 228

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +++LG+  THF N  G+ ++   T      ++    +    +         ++   +
Sbjct: 229 NQKARSLGMIDTHFENPTGLSKYNVSTARDLAKMVEAAYQYPLIRQYSTDLKYEVDTGRR 288

Query: 199 K--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++    
Sbjct: 289 TLYYHSTNILLRDEDWDIGVQKTGYIRESGICLVMQTTIDGREVVMVLLDSAGRHSDFFD 348

Query: 256 SASL 259
           +A L
Sbjct: 349 AARL 352


>gi|50513810|pdb|1TVF|A Chain A, Crystal Structure Of Penicillin-Binding Protein 4 (Pbp4)
           From Staphylococcus Aureus
 gi|50513811|pdb|1TVF|B Chain B, Crystal Structure Of Penicillin-Binding Protein 4 (Pbp4)
           From Staphylococcus Aureus
          Length = 369

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 43  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 102

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 103 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 162

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 163 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 222

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 223 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 282

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 283 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 322


>gi|320324554|gb|EFW80631.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320328927|gb|EFW84926.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 311

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  ALSTTTLANESAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  VVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPML 193

Query: 183 QYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y     NT+  V          KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKMVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|289649634|ref|ZP_06480977.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. aesculi
           str. 2250]
          Length = 313

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 20  ALSTTTLANESAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAM 79

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 80  VVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 135

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 136 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPML 195

Query: 183 QYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y     NT+  V          KTGFT  +G  +V      ++
Sbjct: 196 SELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANR 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 256 PVSVVILDAFGKYTHFADASRIRKW 280


>gi|302540899|ref|ZP_07293241.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458517|gb|EFL21610.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 319

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 19/259 (7%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
                     LLD +    +    PD     AS+TKLMTA VV            T    
Sbjct: 47  PSGIAAKGAYLLDNSANKKLWSKSPDTKRQMASITKLMTAVVVLDTRGVNLNKKVTVKKA 106

Query: 83  SKNASEYPPSN-STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------CKTEKKFV 135
             +       + +  K+G  +T+   L  +++ S  D A+A+A++        K  K F+
Sbjct: 107 YLDYIRTSGGSAADLKQGDKLTVKQLLYGMLLPSGCDAAMALADTFGSGSTTAKRTKSFI 166

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTARDMAILSWRIKTDFPQYMHYFQI---- 190
             MN  +  LG++ T + +  G+  HG +YTTARD++ L+     +         +    
Sbjct: 167 SKMNKKADALGMTKTQYDSFDGISTHGANYTTARDLSKLARHALGNATLRTVVKSVGTEQ 226

Query: 191 ----KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                    +   + ++N  +G++ GA G+KTG   A+G  IV +A +  ++++ V+LG 
Sbjct: 227 KAPAANGRTRTYYWNSSNKLLGSYNGAIGIKTGTGTAAGKCIVFAAKRNGRTVVGVLLG- 285

Query: 247 LDRNTRNKVSASLLSMGFY 265
              + R   +  +L   F 
Sbjct: 286 --DSKRYPDAKKMLDWAFN 302


>gi|256393602|ref|YP_003115166.1| serine-type D-Ala-D-Ala carboxypeptidase [Catenulispora acidiphila
           DSM 44928]
 gi|256359828|gb|ACU73325.1| Serine-type D-Ala-D-Ala carboxypeptidase [Catenulispora acidiphila
           DSM 44928]
          Length = 419

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 10/260 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              +  A +  +  Y + D  TG ++AE  P     PAS  K++TA  +   L   +   
Sbjct: 44  AASVGSAPSVDVASYVVADYATGQILAEQSPHRELYPASTLKVLTADTLIPRLDPAR--- 100

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
           T     +  A+E   S      G T ++ +  +   V+SAND    +A  L       V 
Sbjct: 101 TVTPKAADFAAEPDGSVVGMTAGVTYSIADLWRATFVESANDAVAELA-HLSGGLSATVA 159

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR----IKTDFPQYMHYFQIKG 192
            M   +++LG   T  ++A G  Q G  T+A D+AI +              +      G
Sbjct: 160 AMRQEARSLGAHDTTVLDADGYDQDGQLTSAYDLAIFARAGLRLPAFRAYCDLKQTTFPG 219

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            +         +  + ++ G  G+K G T  +G   V +A +   ++I  ++  L     
Sbjct: 220 PKGTTLTLVGHDPMIKSYPGMIGIKGGLTTKAGHTYVGAATRDGHTVIETLM--LGGTDV 277

Query: 253 NKVSASLLSMGFYNKTDRKK 272
              +A L+  G       K 
Sbjct: 278 FDQAARLMDWGLQADGKVKP 297


>gi|213619028|ref|ZP_03372854.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 272

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 10/237 (4%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D NT  VI  N+PD     AS+TKLMTA VV         +L   I+ +        
Sbjct: 1   MIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKG 57

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S  +  S ++  N L L ++ S N  A ++A         F++ MN  +K LG++ T 
Sbjct: 58  VYSRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTR 117

Query: 152 FMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           F+   G+    + +TARD+  L      + +                      + NTN  
Sbjct: 118 FVEPTGL-SIHNVSTARDLTKLLIATKQYPLIGQLSTTREDMATFSHPAYTLPFRNTNHL 176

Query: 207 VGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           V          KTGFT A+G  +V   +  ++ +  V++ A  + T    ++ L + 
Sbjct: 177 VYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 233


>gi|228999784|ref|ZP_04159358.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|229007339|ref|ZP_04164938.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228753944|gb|EEM03383.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228759991|gb|EEM08963.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
          Length = 273

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         S        Y   +D NTG V+     +    PAS+ K+MT  
Sbjct: 9   FTSMIFFSYTKRQKDVRSNQPDITGKYGVTIDANTGEVLYGKREEERSYPASVAKMMTTI 68

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        ITI++NA +     +    + G  +  D ALKL+++ SA+ IA 
Sbjct: 69  LLLENVKE-----DEEITITENAIKTESQSAKIKLRAGEKLKRDEALKLMLIISADPIAE 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  +++KFV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 124 SIAEHIAGSKEKFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYP 183

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +       +  K  N           A G K+G +    + +V    +  +
Sbjct: 184 IVLEYMNTTRTTLHTSQRAPKIANYGREELYNDPYAIGSKSGLSALGQYTVVTVDEKDGK 243

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 244 RVINVVL-SSTRTQLYPDTKKMAHYAFKQ 271


>gi|257455273|ref|ZP_05620508.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Enhydrobacter
           aerosaccus SK60]
 gi|257447235|gb|EEV22243.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Enhydrobacter
           aerosaccus SK60]
          Length = 364

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 18/247 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  TG+ I E   D     AS++KLMTA VV        A +   +TIS  
Sbjct: 115 ANSKGALVVDALTGNTIYEKNADIARPIASISKLMTAVVVAESG----ANMGETLTISSL 170

Query: 86  ASEYPPS--NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
             + P    +   K G  +     L ++++KS N  A A+A +       F+  MN  ++
Sbjct: 171 DFKTPKQSGSDRLKVGDQLNRAEMLLMMMMKSENPAAKALARTDPMGYDNFISRMNQKAR 230

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
            LG++ T + +  G+    +  + RD+AIL+            +      +         
Sbjct: 231 ELGMTQTRYYDPSGLDS-RNVASPRDLAILARY-AYKHNLISQFSTTPSRQFGVNNINSG 288

Query: 201 ------PNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                  +TN+ V   L   G  KTG+   +G  ++     G++  I V+LGA D  TR 
Sbjct: 289 YRTVAARSTNYMVRDGLYNIGLSKTGYIREAGNCVLFETNVGNRPAIVVLLGANDSKTRW 348

Query: 254 KVSASLL 260
             + +++
Sbjct: 349 NDAENII 355


>gi|289624340|ref|ZP_06457294.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|298487139|ref|ZP_07005189.1| Murein-DD-endopeptidase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158382|gb|EFH99452.1| Murein-DD-endopeptidase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330868676|gb|EGH03385.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330891159|gb|EGH23820.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330985252|gb|EGH83355.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331008609|gb|EGH88665.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 311

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  ALSTTTLANESAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  VVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPML 193

Query: 183 QYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y     NT+  V          KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|229823246|ref|ZP_04449315.1| hypothetical protein GCWU000282_00544 [Catonella morbi ATCC 51271]
 gi|229787412|gb|EEP23526.1| hypothetical protein GCWU000282_00544 [Catonella morbi ATCC 51271]
          Length = 405

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 109/280 (38%), Gaps = 29/280 (10%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
             + + +P    + T     Y ++D +T  V+ E   + P+  AS++K+M+ Y+ +  ++
Sbjct: 51  FTMPSGYPEELNSLTEDTRSYVVIDQDTHKVLMEREGNKPYPIASMSKIMSVYLTYKAIE 110

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFK-----KGSTMTLDNALKLLIVKSANDIAVAIAE 125
           E K  L   I + +        N+          +  T+ + L  +++ S ND    +  
Sbjct: 111 EGKIKLDDKIKVPEAIVRDFTDNAELSNAGLVTDAEYTVQDLLYGIMLASGNDATTLLMS 170

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------------QHGHYTTARDM 170
            +  +E++ V  +       G+    F    G                    +  +A D+
Sbjct: 171 HIYGSEQEAVAAIRRQLDEWGIENYEFYTTSGAPNKYLPESYWIEGSTKDSQNKMSAADV 230

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNW----AVGTFLGADGMKTGFT 221
           A+++  I   +PQ +     +   +        K  N N     A     G  G+K+G+T
Sbjct: 231 ALMAQYITEKYPQILELSSAREYTMAKDSDHPIKMANNNLLLEGAQYGRPGVTGLKSGYT 290

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             +G   V +  +  + +IAV++G  +  +  + +  LL 
Sbjct: 291 DEAGKCFVTTTTENGRKMIAVVMGVQEPYSSYEETKILLD 330


>gi|239930109|ref|ZP_04687062.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291438449|ref|ZP_06577839.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291341344|gb|EFE68300.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 299

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 16/276 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +IA   L       + A +       +++   G  +     D   +  S TK+MTA VV 
Sbjct: 23  VIASGFLYAAPAQAAAAPSIVAKGGFVMNDANGKSLYTKAADTRRSTGSTTKIMTAKVVL 82

Query: 67  SFLKEK-KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           +       A +T  +  S        S++    G  +T+   L  L++ S  D A A+A+
Sbjct: 83  AQKNLNLDAKVTIQMAYSDYIVSKNASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALAD 142

Query: 126 SLCK------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
                       K F+  MN  +K LGL  THF +  G+    +Y+T RD+  ++     
Sbjct: 143 KFGTGSTRSARVKSFIGKMNAEAKKLGLKNTHFDSFDGIGNGKNYSTPRDLTKIASSAMK 202

Query: 180 DFPQYM---------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
           +                    G       + NTN  +  + G  G+KTG    S + +V 
Sbjct: 203 NSTFRTIVKTKKYTAKTTTKTGSTRTMAPWTNTNTLLSNYSGTIGVKTGSGSTSKYCLVF 262

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +A +  +++I  +L +     R   +  LL  GF  
Sbjct: 263 AATRNGKTVIGTVLTSSSAAQRETDAKKLLGYGFSK 298


>gi|71736880|ref|YP_274768.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557433|gb|AAZ36644.1| penicillin-binding protein 7 [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 311

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 101/265 (38%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            ++   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  ALSTTTLANESAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           VV    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  VVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPML 193

Query: 183 QYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y     NT+  +          KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKTVTFRKPTYTLGFSNTDHLLRKDNWDIKLTKTGFTNQAGHCLVLLTSMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|225419739|ref|ZP_03762042.1| hypothetical protein CLOSTASPAR_06077 [Clostridium asparagiforme
           DSM 15981]
 gi|225041629|gb|EEG51875.1| hypothetical protein CLOSTASPAR_06077 [Clostridium asparagiforme
           DSM 15981]
          Length = 455

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 22/254 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +       + D +    I          PAS TK+MTA V   +       L   +T+++
Sbjct: 203 SVTSEAAAVFDLDDCSTIYSKNAFERLYPASTTKVMTALVAIKY-----GNLADEVTVTE 257

Query: 85  NASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           +A       +    K G  +T++  L  L++ S ND   AIA  +  + +KF   MN  +
Sbjct: 258 DAVITEAGATLAGIKPGDKLTMEQLLYGLMLPSGNDAGAAIAVHMAGSIEKFADMMNEEA 317

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG---------- 192
           + LG + THFMN HG+    HYTTA D+ ++                             
Sbjct: 318 RRLGATGTHFMNPHGLNDPNHYTTAYDLYLIFNEALKQPMFRKITGSTAYTANYRGADGK 377

Query: 193 ----LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGAL 247
                   G  +          L   G KTG T A+G+ +V ++    D+  I+V++ A 
Sbjct: 378 TVSKTWKGGNWFMTGERKTPDGLTVFGGKTGTTKAAGYCLVMASRDDEDRGYISVVMKAD 437

Query: 248 DRNTRNKVSASLLS 261
            R        +++S
Sbjct: 438 SRPGLYDNMTNIIS 451


>gi|225028474|ref|ZP_03717666.1| hypothetical protein EUBHAL_02751 [Eubacterium hallii DSM 3353]
 gi|224954224|gb|EEG35433.1| hypothetical protein EUBHAL_02751 [Eubacterium hallii DSM 3353]
          Length = 543

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 62/271 (22%), Positives = 96/271 (35%), Gaps = 15/271 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
               A   +   Y ++D  +G V+     +    PAS  KLMTA V          + T 
Sbjct: 23  AKVKAPKKQCHAYVVMDAGSGEVLFGQDANKKIYPASTAKLMTAIVCVEKGNVNSVIKTK 82

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
              + +        +     G   T  + L + ++ SA D   ++A  +  ++K  V+ M
Sbjct: 83  SDVVYRTTPGTY--SLGIGAGVNYTFKDLLHMSLMSSAADATDSLAVGVFGSKKACVEAM 140

Query: 139 NNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
           N   K LGL  THF N  G       +  Y +A++MA +               +     
Sbjct: 141 NEKCKELGLKKTHFDNPVGSDIGAGYNETYASAKEMAKICRYAMAIPLIRSAVSKAHYST 200

Query: 195 IKGKKYPN-TNWAVGTFLG-------ADGMKTGFTCASGFNIVAS-AIQGDQSLIAVILG 245
            KG  Y N TNW +              G K+G T A+G   +A+ A      LI    G
Sbjct: 201 QKGGMYVNTTNWFLKGMAYYDRDTYKIIGSKSGTTNAAGHVFIATAADYKGHELICAYFG 260

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
            + + +      SL    F N    K     
Sbjct: 261 NVSKESTFASIRSLFDYAFNNYKKGKLTLTP 291


>gi|167838920|ref|ZP_02465697.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 349

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 8/244 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  +     ++D +TG  + +         AS+TKLMTA VV          L  P
Sbjct: 89  TPRPFGLRSNIVYMVDQHTGEALFDRNSQSVAPIASVTKLMTAMVVLDSKAP----LDEP 144

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     ST+T D+ L + ++ S N  A A++         FV  M
Sbjct: 145 IEVTDDDRDQDKFTGSRLAIGSTLTRDDMLHIALMASENRAAAALSRYYPGGRDAFVDAM 204

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +++LG+  THF N  G+ +H   T    + ++    +    +         ++   +
Sbjct: 205 NQKARSLGMVDTHFENPTGLSKHNVSTARDLVKMVEAAYQYPLIRQYSTDLKYDVDTGLR 264

Query: 199 K--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++    
Sbjct: 265 TLYYHSTNILLRDDDWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFFD 324

Query: 256 SASL 259
           +A L
Sbjct: 325 AARL 328


>gi|331268991|ref|YP_004395483.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           BKT015925]
 gi|329125541|gb|AEB75486.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum
           BKT015925]
          Length = 444

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 128/371 (34%), Gaps = 43/371 (11%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH-PWNPASLTKLMTAYVVF 66
           I ++  +  F     A         ++D  TG VI     D  P  PAS TKL+TA ++ 
Sbjct: 14  IFLSFCTTAFAANLNAPNVVGKSAIVVDAKTGEVIYAKDVDTSPMYPASTTKLLTALLLA 73

Query: 67  SFLKEKKA-MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
              +       T   +     +         K G  M+ D+A+K L++ SANDIA  IA+
Sbjct: 74  ENKQPTDILTYTDGASKQPEYTLRSFLKGQLKVGDKMSADDAMKGLLLHSANDIAYMIAD 133

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--HGHYTTARDMAILSWRIKTDFPQ 183
           ++    + F + MN+  K LGL+ THF+  +G+      HYT+A D++++      +   
Sbjct: 134 NVAGNTENFAKMMNDKIKKLGLTHTHFVTPNGLDNGITDHYTSAYDLSVIGRAAYENEWV 193

Query: 184 YMHYFQIKGL------------------------EIKGKKYPNTNWAVGTFLGADGMKTG 219
                  K                              K   N      +     G KTG
Sbjct: 194 RKTMNLKKDKIELTNGVLGYPENRNKLLGKTLDSNFNSKTGINIKDVPVSDAVCIGGKTG 253

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNK--------- 267
           +T  +G  +VA   +  + LI V++ +    +        A  ++  +  K         
Sbjct: 254 YTSKAGRCLVAMFNKDGRILIGVVMKSAYDKNDTYVFNDMAKTINWAYSAKQVALYKADT 313

Query: 268 --TDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                      +K F      N    + E+V     E     T+ +             K
Sbjct: 314 ELKTLSIKYRPLKFFGPTKTINVPVTVKEDVTYYDNEFNKAETKTEFELPDIGIGH-LSK 372

Query: 326 ITLLKNKITKK 336
              +   + K+
Sbjct: 373 NKSIGKLVLKQ 383


>gi|306973781|ref|ZP_07486442.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu010]
 gi|307081490|ref|ZP_07490660.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu011]
 gi|308356859|gb|EFP45710.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu010]
 gi|308360815|gb|EFP49666.1| penicillin-binding protein dacB1 [Mycobacterium tuberculosis
           SUMu011]
          Length = 307

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 12/239 (5%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + D ++G VIA   P     PAS+ K++ A             L   +  + + +    +
Sbjct: 1   MADLDSGAVIAARDPHGRHRPASVIKVLVAM-----ASINTLTLNKSVAGTADDAAVEGT 55

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                 G T T++  L  L++ S ND A A+A  L        + +N  +  LG   T  
Sbjct: 56  KVGVNTGGTYTVNQLLHGLLMHSGNDAAYALARQLGGMPAAL-EKINLLAAKLGGRDTRV 114

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPNTNWAV 207
               G+   G  T+A D+ +       +           +      +  G +  N N  +
Sbjct: 115 ATPSGLDGPGMSTSAYDIGLFYRYAWQNPVFADIVATRTFDFPGHGDHPGYELENDNQLL 174

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GALDRNTRNKVSASLLSMGFY 265
             + GA G KTG+T  +G   V +A +  + L+ V+L G        + +A LL  GF 
Sbjct: 175 YNYPGALGGKTGYTDDAGQTFVGAANRDGRRLMTVLLHGTRQPIPPWEQAAHLLDYGFN 233


>gi|169827425|ref|YP_001697583.1| hypothetical protein Bsph_1859 [Lysinibacillus sphaericus C3-41]
 gi|168991913|gb|ACA39453.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 292

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 12/242 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L++ +   V+ +   +    PASLTK+MT  V    +   +  +     I  
Sbjct: 39  NLYSSNAILVNLDDNKVLIDKNSEEVIYPASLTKMMTVLVAIEQIPNLQEEIVLGNNIFN 98

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           N  E   S + F     +TL++ L   ++ S  + ++ +AE +  +E+KFV  MN  ++ 
Sbjct: 99  NLYEANASLAGFLPNEKLTLEDLLYGSMLPSGAEASIGLAEYIAGSERKFVNLMNEKAQQ 158

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL----------- 193
           LG+  THFMN  G+    HYTT +DM++L     T+      Y   +             
Sbjct: 159 LGMKNTHFMNTTGLHHSDHYTTVKDMSLLLQYALTNDEFRQVYTAERYSIKPTNRHPEGI 218

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               K + N            G KTG+T  +G  + + A    Q  I V +GA   N+R 
Sbjct: 219 TFTNKMFQNMTTRALPGGEILGGKTGYTDDAGLCLASLATINGQEYILVTVGAEG-NSRT 277

Query: 254 KV 255
           + 
Sbjct: 278 EQ 279


>gi|320140025|gb|EFW31886.1| beta-lactamase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320141884|gb|EFW33712.1| beta-lactamase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 414

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 40  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 99

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 100 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 159

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 160 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 219

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 220 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 279

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 280 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 319


>gi|282915977|ref|ZP_06323742.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus D139]
 gi|282320273|gb|EFB50618.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus D139]
          Length = 431

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A  + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAMKVSKNTSNFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINDKKYYVE 336


>gi|325266278|ref|ZP_08132957.1| D-alanyl-D-alanine carboxypeptidase [Kingella denitrificans ATCC
           33394]
 gi|324982240|gb|EGC17873.1| D-alanyl-D-alanine carboxypeptidase [Kingella denitrificans ATCC
           33394]
          Length = 317

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 11/240 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK- 84
                  +++ NTG ++ +   +   + AS++KLM A VV       +  +   ITI++ 
Sbjct: 74  LNAQAAAIMNANTGQILFQKNMNSVRSIASISKLMAAMVVLDA----RLDMGQTITITEA 129

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  + S    G+ +T    L L ++ S N    A+A +       FVQ MN  +++
Sbjct: 130 EIDRLKGTGSRLSIGTELTRTQLLHLGLMSSENRAIHALARTYPGGMSAFVQAMNAKAQS 189

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LG+  T F    G+    + +TA D+ ++        +          Q+     + ++Y
Sbjct: 190 LGMRHTRFYEPTGL-DPRNVSTASDLLLMAQAADRYPQIRQFSTAKSGQVYTSAGRVQQY 248

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            N+N  V          KTG+   +G ++V     G   +I V+LG+    TR   + +L
Sbjct: 249 QNSNALVREGRWNISVQKTGYIREAGRSMVLKTQMGRDPIIMVVLGSSTSTTRVNDARTL 308


>gi|82750345|ref|YP_416086.1| penicillin binding protein 4 [Staphylococcus aureus RF122]
 gi|82655876|emb|CAI80280.1| penicillin binding protein 4 [Staphylococcus aureus RF122]
          Length = 431

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LD 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA        
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLDG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|257452169|ref|ZP_05617468.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 3_1_5R]
          Length = 383

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 10/240 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              + D   G++      D     AS+TK+MT  V F  ++  +A     + I+K+    
Sbjct: 139 AGLVAD-TRGNIYYSKNIDKKLPMASVTKVMTLLVTFDAIRNGEAHFDDKVVITKDVYNK 197

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLS 148
             S  + K G T TL + ++   + SAN+ A A+A+ + K +   F++ MN  ++ +G+S
Sbjct: 198 GGSGISMKPGETFTLLDLIRATAIYSANNAAYAVAKHIGKGSIPNFIKKMNKKAREVGVS 257

Query: 149 ATH-FMNAHGVV-----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
               + +  G+      +     TAR +  LS      +P+YM    IK ++I   +   
Sbjct: 258 KEISYYSPAGLPTRYTKEPMDIGTARGIYKLSLEAI-KYPEYMEIAGIKQMKIHNGRISI 316

Query: 203 TNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N        G  G+KTG+   + +NI  ++  G +  I VILG      R+     LL 
Sbjct: 317 RNRNHLIGEEGIYGIKTGYHKEAKYNITVASKDGQREFIVVILGGNSYKDRDNAVLHLLD 376


>gi|266618633|pdb|3HUM|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 From
           Staphylococcus Aureus Col In Complex With Cefotaxime
 gi|266618634|pdb|3HUM|B Chain B, Crystal Structure Of Penicillin Binding Protein 4 From
           Staphylococcus Aureus Col In Complex With Cefotaxime
 gi|266618635|pdb|3HUN|A Chain A, Crystal Structure Of Penicillin Binding Protein 4 From
           Staphylococcus Aureus Col In Complex With Ampicillin
 gi|266618636|pdb|3HUN|B Chain B, Crystal Structure Of Penicillin Binding Protein 4 From
           Staphylococcus Aureus Col In Complex With Ampicillin
          Length = 453

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 79  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 138

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 139 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 198

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 199 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 258

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 259 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 318

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 319 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 358


>gi|90578556|ref|ZP_01234366.1| Hypothetical D-alanyl-D-alanine endopeptidase [Vibrio angustum S14]
 gi|90439389|gb|EAS64570.1| Hypothetical D-alanyl-D-alanine endopeptidase [Vibrio angustum S14]
          Length = 298

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 101/276 (36%), Gaps = 18/276 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR   ++       +                         ++D +TG  + +   +    
Sbjct: 1   MRNAFILFFTLASISFSSMASINTSKLDPNKLQTASVSNYVIDLSTGKTLYKKNSNVKMP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLL 111
            ASLTKLMTA V        K  L   +T +  +      + +  + GST++    + + 
Sbjct: 61  IASLTKLMTAMVTLDA----KLPLNEKLTFTPTDKERMYNTYTRIRMGSTLSRGETIHIA 116

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S N  A  +A +     + F++ MN  +K+LG++ THF+++ G+  H H T +    
Sbjct: 117 LMSSENLAAATLAGNYPGGYEAFIKAMNRKAKSLGMTNTHFVDSSGLDPHNHSTASDVAK 176

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCASGF 226
           ++    K    +      +             Y NTN          +  KTG+   +G 
Sbjct: 177 MVRAAYKYPEIRKYSTSPVHTAYFGKPSYKLGYTNTNALARGKKWTVNLTKTGYLDEAGR 236

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            +        + ++ V+L +  + T    +  +   
Sbjct: 237 CLGMVTTIDGKRILMVMLDSQGKLTPIGDAGRIKQW 272


>gi|148544752|ref|YP_001272122.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri DSM
           20016]
 gi|184154105|ref|YP_001842446.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus reuteri JCM
           1112]
 gi|227363878|ref|ZP_03847983.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           MM2-3]
 gi|325683088|ref|ZP_08162604.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           reuteri MM4-1A]
 gi|148531786|gb|ABQ83785.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri DSM
           20016]
 gi|183225449|dbj|BAG25966.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus reuteri JCM
           1112]
 gi|227071105|gb|EEI09423.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           MM2-3]
 gi|324977438|gb|EGC14389.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           reuteri MM4-1A]
          Length = 414

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 117/383 (30%), Gaps = 50/383 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENY 46
           M++     A  +L      +              + A          +D  +G V+ +  
Sbjct: 1   MKKVKSFFAKLLLITAIISICLNGLGMFEKVHADTAAFQMDARAAYAIDAESGQVLYQKN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
               +  AS+ K++T  V+   ++         I I+   ++                + 
Sbjct: 61  ATKRYPIASVIKILTLGVILQDIRNHHLKWDQKIKITPAVAKMADDWHFSNVPLMNGEEY 120

Query: 107 ALKLLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--- 159
            ++ L+       A    E    +   +   F + M   +K  G++     N  G+    
Sbjct: 121 TVRQLVDSMMLVSADGSTEALALADAGSTAAFNKKMMAFAKKAGVTDIKIYNMIGLPNGD 180

Query: 160 -----------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNT 203
                         +  +A+D+A++S  +  ++P+ +   + K       K       N 
Sbjct: 181 LGKHKLKGVDKDAENLLSAKDVALISKYLVENYPETLDITKQKFANFDVTKDQQYLMTNV 240

Query: 204 NW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           N               DG+KTG T  +G  IV++     + +I V L             
Sbjct: 241 NALLPQNGFAPKDGEIDGLKTGNTDRAGKCIVSTGTFAGRRIILVALHTKGEWNDQSKMQ 300

Query: 258 -----SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
                 L+    Y   + KK++ +        + N        +  T+K  +     MK 
Sbjct: 301 QDFYNKLVDE--YQPVEIKKVSDLSAKLTSVKVKNGKNKNKANIKLTKKTTVWLPKNMKL 358

Query: 313 AKDKESHFIDFEKITLLKNKITK 335
              K +  +  +    L   I K
Sbjct: 359 QATKPTLRVQGDDQKQLTAPIKK 381


>gi|126649987|ref|ZP_01722220.1| hypothetical protein BB14905_01915 [Bacillus sp. B14905]
 gi|126593159|gb|EAZ87121.1| hypothetical protein BB14905_01915 [Bacillus sp. B14905]
          Length = 289

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 12/242 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
               P   L++ N   V+ +   +    PASLTK+MT  V    +   +  +     I  
Sbjct: 36  NLYSPNAILVNLNENKVLIDKNSEEVIYPASLTKMMTVLVAIEQIPNLQEEIVLGNNIFN 95

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +  E   S + F     +TL++ L   ++ S  + ++ +AE +  +E+KFV  MN  ++ 
Sbjct: 96  HLYEANASLAGFLPNEKLTLEDLLYGSMLPSGAEASIGLAEYIAGSERKFVNLMNEKAQQ 155

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL----------- 193
           LG+  THFMN  G+    HYTT +DM++L     T+      Y   +             
Sbjct: 156 LGMENTHFMNTTGLHHTEHYTTVKDMSLLLQYALTNDEFRQVYTAERYSIKPTNRHPEGI 215

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               K + N            G KTG+T  +G  + + A    Q  I V +GA   N+R 
Sbjct: 216 TFTNKMFQNMTTRALPGGEILGGKTGYTDDAGLCLASLATINGQEYILVTVGAEG-NSRT 274

Query: 254 KV 255
           + 
Sbjct: 275 EQ 276


>gi|306821313|ref|ZP_07454923.1| possible beta-lactamase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550654|gb|EFM38635.1| possible beta-lactamase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 383

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 106/283 (37%), Gaps = 8/283 (2%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D ++G V+     D     AS+TK++   V+   +K     +   + IS
Sbjct: 14  PVITGVSGAIMDYDSGAVLWSKNGDSKRTIASMTKVLAVAVILDEIKAGNLSMNDKVAIS 73

Query: 84  KN-----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +            +   F+ G T T+   L   +V S+N   +AI E +  +   F   M
Sbjct: 74  EYASAISHDPAWAAYECFQVGETYTVKTLLTNAVVSSSNASIIAIGEHISGSTANFAIKM 133

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +  +G    +F    G+ +    T    + +  +       +      +K + IKG 
Sbjct: 134 NTLAAKIG-MEGNFTEPSGIDEANVTTAKSMLKLGKYMYDNHEKEIKKMTMLKEVYIKGI 192

Query: 199 KYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
               TN  +   + G +G+KTG       N +  A +G++ LIAV +     N R   + 
Sbjct: 193 SKEATNKLLLNDYYGIEGLKTGAYSLDNANFIGVAKRGNKRLIAVTMHTTSDN-RFTDTI 251

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
            +   G+ N  ++   N       Q +  N+ P   +    T 
Sbjct: 252 KMFEFGWKNDFNKYWKNDKRLTETQISSDNKNPKNGDTFKVTL 294


>gi|332639010|ref|ZP_08417873.1| D-alanyl-D-alanine carboxypeptidase [Weissella cibaria KACC 11862]
          Length = 421

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 112/280 (40%), Gaps = 28/280 (10%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           I+ +  ++      ++          + D  TG V+A+   +     AS++KL+T Y+V 
Sbjct: 13  ILLVTGIATSASAATVTPKVDAQSAVVADVQTGQVLADKNGNERMPIASISKLLTVYLVE 72

Query: 67  SFLKEKKAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
             +KE +  + + I +  +           N         T+   +++ ++KSAN  A+A
Sbjct: 73  QAIKEGRLSMQSQIKVPASIVAISNEPALANVPLSTERAYTIQELMEMALIKSANAAALA 132

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTAR 168
           +  ++  T+    Q + +   + G+  T  ++  G+                  +  +AR
Sbjct: 133 LGYAVSGTDTGVNQQIQDLLTSWGIKDTTIVSGAGLTNGDMGALTNPKLGADVENELSAR 192

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLE-----IKGKKYPNTNWAVGTFLG--ADGMKTGFT 221
           ++AI+   + TD+P+      ++  E        +   N++  +    G    G+KTG+ 
Sbjct: 193 ELAIVGRHLVTDYPEIQQITSMQTAEVPSGATGTETIENSDKLLADGQGYKFTGLKTGYA 252

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            +     +       + ++ V+LG+         + ++L+
Sbjct: 253 LSVHSTFIGLTTLEGRQVVTVVLGSDHT---FSQTVAMLN 289


>gi|253731263|ref|ZP_04865428.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253725004|gb|EES93733.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 431

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   + ++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVRMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|283769805|ref|ZP_06342697.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus subsp. aureus H19]
 gi|283459952|gb|EFC07042.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus subsp. aureus H19]
          Length = 431

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A  + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAMKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|89074889|ref|ZP_01161339.1| Hypothetical D-alanyl-D-alanine endopeptidase [Photobacterium sp.
           SKA34]
 gi|89049286|gb|EAR54849.1| Hypothetical D-alanyl-D-alanine endopeptidase [Photobacterium sp.
           SKA34]
          Length = 298

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 99/276 (35%), Gaps = 18/276 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR   ++       +                         ++D +TG  +     +    
Sbjct: 1   MRNAFILFFTLASISFSSMASINTSKLDPNKLQTASVSNYVIDLSTGKTLYRKNSNVKMP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLL 111
            ASLTKLMTA V        K  L   +T +  +      + +  +  ST++    + + 
Sbjct: 61  IASLTKLMTAMVTLDA----KLPLDEKLTFTPTDKKHMYNTYTRIRMDSTLSRGETIHIA 116

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S N  A  +A +     K F++ MN  +K+LG++ THF+++ G+  H H T +    
Sbjct: 117 LMSSENLAAATLAGNYPGGYKAFIKAMNRKAKSLGMTNTHFVDSSGLDPHNHSTASDVAK 176

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCASGF 226
           ++    K    +      +             Y NTN          +  KTG+   +G 
Sbjct: 177 MVRAAYKYPEIRKYSTSPVHTAYFGKPNYKLGYTNTNALARGKKWTVNLTKTGYLDEAGR 236

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            +        + ++ V+L +  + T    +  +   
Sbjct: 237 CLGMVTTIDGKRILMVMLDSQGKLTPIGDAGRIKQW 272


>gi|119357228|ref|YP_911872.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354577|gb|ABL65448.1| Serine-type D-Ala-D-Ala carboxypeptidase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 291

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 25/282 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKL----------PYYTLLDTNTGHVIAENYPDHPW 51
           +  L + +M + S I   +  A                 Y L +T +  V      +   
Sbjct: 10  KSVLFLFSMFLASGISMPVYAALPVDSLLQPLQPPEIGSYILKETGSSKVFMVKDSEKTI 69

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PASLTK++T+ +     +     L   + I+K A+   PS + FK G  + L + +K  
Sbjct: 70  QPASLTKILTSIIALESGQ-----LDDEVVITKEATMVEPSKAGFKPGERILLRDLVKAA 124

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH---GHYTTAR 168
           +V S+ND A AI   L  +  +FV+ MN  ++++G+  + F N  G  +    G+ +TA 
Sbjct: 125 MVSSSNDAAFAIGIHLEGSVPRFVRKMNRKARDIGMRHSVFTNPAGFDKRVYAGNVSTAE 184

Query: 169 DMAILSWRIKTDFPQY-----MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           D+  L+     +               +    K       N  +G +  A G+KTGFT +
Sbjct: 185 DLVKLTEYAIRNRKFNEIASLESVLVTERSSNKIYLLKTHNKLLGKYPYAVGIKTGFTRS 244

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           +G  ++A A + ++ ++ V+L A     R  ++  +    F 
Sbjct: 245 AGKCLIARAKKENKDMLLVLLDAKG--DRWSIAEQMFESAFT 284


>gi|291613451|ref|YP_003523608.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sideroxydans
           lithotrophicus ES-1]
 gi|291583563|gb|ADE11221.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sideroxydans
           lithotrophicus ES-1]
          Length = 299

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 104/254 (40%), Gaps = 9/254 (3%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           S++          +     + D      I      +    AS+TKLMTA V+        
Sbjct: 35  SSVAFSHMPPPRLQSAIAMIYDEQDQRPIYSKNSHNVVPIASITKLMTAMVILDAK---- 90

Query: 74  AMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
             +  PI+IS  +      S S  + G T+T    ++L ++ S N  A A+A +      
Sbjct: 91  LPMDEPISISPEDRDHLKGSRSRMRNGMTLTRAELIQLALMSSENRAAAALARTYPGGTP 150

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
             +  MN  ++ LG+++THF++  G+      T    + ++      ++ Q+      + 
Sbjct: 151 VMLAMMNAKARELGMNSTHFLDPTGLNSANVSTAQDLVKMVMAAQGYEYIQHCTTSHSRI 210

Query: 193 LEIKGK---KYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
           +++  +   ++ NTN  V       G  KTG+   +G  +V  A   D+ +I V+L +  
Sbjct: 211 VQVDSRRTLRFSNTNPLVRNSQWDIGLSKTGYISEAGRCLVMQARITDRPVIIVLLDSWG 270

Query: 249 RNTRNKVSASLLSM 262
           + TR   +  +   
Sbjct: 271 KRTRVGDAVRVKHW 284


>gi|109240381|dbj|BAE96115.1| D, D-carboxypeptidase [Enterococcus raffinosus]
          Length = 355

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 107/266 (40%), Gaps = 29/266 (10%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +I          +++ +T  ++ +        PAS  K++TA  V  +          
Sbjct: 91  ANAIDLNIIAANAIVMNKDTDALLYQKNGTDRIAPASTAKMITALTVLEYC-----SPEE 145

Query: 79  PITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAES---------- 126
            + +          +S     KG T+T+   L  L++ S ND A  +A +          
Sbjct: 146 EMRVGAEIEMIHSDSSTAWLMKGDTLTVRQLLIALMLPSGNDAAYTLAVNTGKVIAGDNS 205

Query: 127 --LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
               +  + F+  +N  ++ +G++ ++F+   G    G YTTA D+AI++     D    
Sbjct: 206 LSNQQAIQIFMDKVNEKARAIGVTDSNFVVPDGYDAEGQYTTAYDLAIIAKACLEDPIIS 265

Query: 185 M----HYFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                +    K    +   Y N+N      +        G+KTG +   G  +V++A+  
Sbjct: 266 EIVASNTSYEKWPNGREVTYNNSNELLDPNSPYYRPEVIGLKTGTSSLGGACVVSAAVID 325

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
            ++ I V++G+  + +R + S ++L 
Sbjct: 326 GETYICVVMGS-TKESRFQDSVAILD 350


>gi|227530146|ref|ZP_03960195.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus vaginalis
           ATCC 49540]
 gi|227349929|gb|EEJ40220.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus vaginalis
           ATCC 49540]
          Length = 415

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 126/392 (32%), Gaps = 57/392 (14%)

Query: 1   MRQF--------LVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPD 48
           M++         + I+ + ++S  F   + A+T            +D  TG V+ +   +
Sbjct: 1   MKKLKRALIAFLVTILTVNVVSLGFANSASADTTKLNLNARAAYAIDAETGQVLYQKNAN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTL 104
             +  ASLTK++T  V+   +K         + I+       +++  SN     G + T+
Sbjct: 61  KTYPVASLTKVLTLAVIEQDVKNHHLSWNQKVKITPAVAKVANDWHFSNVPLNAGESYTI 120

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-- 162
               + +++ SA+  A A+A +   +   F + M   +K  G++     N  G+      
Sbjct: 121 RQLTESMMIVSADGSAEALALADAGSTAAFNKKMQAVAKKAGVTDAKIYNMIGLANGDLG 180

Query: 163 ------------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK-----GKKYPNTNW 205
                       +  +A+DMA++S  +   +P  +   + K    +       +  N N 
Sbjct: 181 KNSLKGVKKTAENQFSAKDMALISKYLIETYPDSLKITKTKMANFRVSANQEYQMININS 240

Query: 206 ------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSAS 258
                         DG+KTG T  +G  I+++     + +I V L      N ++K +  
Sbjct: 241 LLPENGFAPKNGTIDGLKTGNTDTAGKCIISTGTFAGRRVIVVALHTKGDWNAQSKDAQK 300

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
                       +  +        Q+                 +            ++  
Sbjct: 301 FYEKLTEIYQPVQLTSLRQLSKNVQDAHVVHAKDKHSTGLELTKATTIWLPKGTVLNQVG 360

Query: 319 ---------------HFIDFEKITLLKNKITK 335
                               +K   +     K
Sbjct: 361 AKLKIAQADRSMTHQLKTPVKKGQHVGYVTLK 392


>gi|317058712|ref|ZP_07923197.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 3_1_5R]
 gi|313684388|gb|EFS21223.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 3_1_5R]
          Length = 390

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 10/240 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              + D   G++      D     AS+TK+MT  V F  ++  +A     + I+K+    
Sbjct: 146 AGLVAD-TRGNIYYSKNIDKKLPMASVTKVMTLLVTFDAIRNGEAHFDDKVVITKDVYNK 204

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLS 148
             S  + K G T TL + ++   + SAN+ A A+A+ + K +   F++ MN  ++ +G+S
Sbjct: 205 GGSGISMKPGETFTLLDLIRATAIYSANNAAYAVAKHIGKGSIPNFIKKMNKKAREVGVS 264

Query: 149 ATH-FMNAHGVV-----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
               + +  G+      +     TAR +  LS      +P+YM    IK ++I   +   
Sbjct: 265 KEISYYSPAGLPTRYTKEPMDIGTARGIYKLSLEAI-KYPEYMEIAGIKQMKIHNGRISI 323

Query: 203 TNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N        G  G+KTG+   + +NI  ++  G +  I VILG      R+     LL 
Sbjct: 324 RNRNHLIGEEGIYGIKTGYHKEAKYNITVASKDGQREFIVVILGGNSYKDRDNAVLHLLD 383


>gi|315659004|ref|ZP_07911871.1| penicillin binding protein 4 [Staphylococcus lugdunensis M23590]
 gi|315496128|gb|EFU84456.1| penicillin binding protein 4 [Staphylococcus lugdunensis M23590]
          Length = 432

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 142/369 (38%), Gaps = 55/369 (14%)

Query: 1   MRQFLVIIAMAML----SNIFPFLSIAETNKLPYYTL-----------LDTN-------T 38
           M++  +I+ + ++       + F + ++    P                D         T
Sbjct: 1   MKKIFIILILVLVSFTQFTPYLFAAESDAVLSPSQIATQYGYTGITAAYDPEGAINVSQT 60

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNS 94
           G ++   + +  W  AS+TKLMT Y+    +K+    L   + I++N          SN+
Sbjct: 61  GQILYNYHGNKKWYLASMTKLMTMYLTLEAVKKGDLSLDDKVKITQNHYRMSTLPELSNT 120

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
               G   T+   L++ +  S+N  A+ +A  +      F + MN  +K LG++ T+F N
Sbjct: 121 KLYPGEVYTIAELLQITVSNSSNAAALILANKVSGNVTSFTKLMNKKAKELGMTHTYFTN 180

Query: 155 AHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             G                 +   +TA+D AIL   +  D P  +H+ +       G  Y
Sbjct: 181 PTGAENTQLQEFAPKLTTNDNNSTSTAKDYAILDQHVIADTPNILHFTKQLAPTQHGVTY 240

Query: 201 PNTNWAVG----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDRN 250
              N ++     +  G DG+KTG +  + +N   +  +G   +  VILG           
Sbjct: 241 YTFNHSLEGASLSLPGTDGLKTGSSDIANYNHTITTKRGKFRINQVILGVGDYNNLGGEK 300

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            RNK+  +++   F     +K ++         N++ +   I +++     + ++     
Sbjct: 301 ERNKMGNAIMESSFNQYAYKKVLSKGEH-----NINGKTYYIKKDLYDVVPKTLHAKDYQ 355

Query: 311 KEAKDKESH 319
               D E H
Sbjct: 356 FVINDGEVH 364


>gi|302186370|ref|ZP_07263043.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. syringae
           642]
          Length = 311

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  T  V+  + PD     AS+TKLMTA VV    +    ++   I+ +  
Sbjct: 40  LASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPE 99

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                   S  K GS M   + L + ++ S N  A ++A S       F+  MN  +K L
Sbjct: 100 ---MKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKAL 156

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP---- 201
           G+  T ++   G+  +   T      ++    K      +   + K +  +   Y     
Sbjct: 157 GMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFS 216

Query: 202 NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           NT+  V          KTGFT  +G  +V      ++ +  VIL A  + T    ++ + 
Sbjct: 217 NTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIR 276

Query: 261 SM 262
             
Sbjct: 277 KW 278


>gi|302386416|ref|YP_003822238.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
 gi|302197044|gb|ADL04615.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           saccharolyticum WM1]
          Length = 322

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 96/267 (35%), Gaps = 22/267 (8%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +        S           + D     V+    P     PAS+TK MTA +   +   
Sbjct: 57  LCIVSEDTSSKDGAVTAEAAAVFDLTDKKVLFAKNPFERLYPASITKTMTALIALKY--- 113

Query: 72  KKAMLTTPITISKNASEYPPSN--STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
               LT  +T++ +A            K G  +T++  L  L++ S ND   AIA  +  
Sbjct: 114 --GNLTDEVTVTGDAVITEAGASLCGIKPGDKLTMEQLLYGLMLPSGNDAGAAIATHIAG 171

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
              +F Q MN  +  +G + THF+N HG+    HYTTA D+ ++                
Sbjct: 172 GIDQFSQMMNEEAGKIGATGTHFLNPHGLNDENHYTTAYDLYLIFNEALKYPEFRKIIAT 231

Query: 190 IKGLEI--------------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI-VASAIQ 234
            +                      Y      +   L   G KTG T A+G  + + S+  
Sbjct: 232 TEYTTTYQDGAGSPVNATWKGTNWYMTGERQMPEGLTVLGGKTGTTKAAGSCLIMGSSDS 291

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLS 261
             +  + V+L A +         ++L+
Sbjct: 292 SQREYVTVVLKAPNHAGLYDNMTNILN 318


>gi|269302456|gb|ACZ32556.1| D-alanyl-D-alanine carboxypeptidase family protein [Chlamydophila
           pneumoniae LPCoLN]
          Length = 436

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 106/300 (35%), Gaps = 36/300 (12%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ F   + +    +       A       +     ++  ++G V  +   D    PAS
Sbjct: 1   MKRPFFTYLCIIFYGSCASLSLHAGLSFPEVRGATAAVVHADSGKVFYDKDIDAVIYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAML-----------------TTPITISKNASEYPPSNSTFKK 98
           +TK+ TA  +          L                  +      +  E   S      
Sbjct: 61  MTKIATALFILKHYPTVLDTLIKVKQDAIASITPQAKKQSGYRSPPHWLETDGSTIQLHL 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK-NLGLSATHFMNAHG 157
              +   +    L+V SAND A  +A + C + +KF+  +N   K  +G + THF N HG
Sbjct: 121 REELLGWDLFHALLVCSANDAANVLAMACCGSVEKFMDKLNFFLKEEIGCTHTHFNNPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP------NTNW-----A 206
           +    HYTT RD+  +      + P +         +I             TN      +
Sbjct: 181 LHHPNHYTTTRDLISIMRCALKEPP-FRGVISTTSYKIGATNLHGERILSPTNKLLLPGS 239

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFY 265
              +  A G KTG T  +G N++ +A + ++ L+ +  G     +   +   +L    F 
Sbjct: 240 TYHYPPALGGKTGTTKTAGKNLIMAAEKNNRLLVTIATGYSGPVSDLYQDVIALCETVFN 299


>gi|323442079|gb|EGA99713.1| penicillin binding protein 4 [Staphylococcus aureus O46]
 gi|333033712|emb|CBZ41973.1| penicillin binding protein 4 [Staphylococcus aureus]
          Length = 431

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|268680339|ref|YP_003304770.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268618370|gb|ACZ12735.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 309

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/294 (20%), Positives = 118/294 (40%), Gaps = 21/294 (7%)

Query: 2   RQFLVIIA-MAMLSNIFPFLSIAETNKLP------YYTLLDTNTGHVIAENYPDHPWNPA 54
           ++FL ++  +++L+       + +                D +T  +I          PA
Sbjct: 3   KKFLTLLCGVSLLTTSLSANYLDKETAARLSKNTDAIIAKDLSTKELIFSKDAQKINQPA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK+MTA +     +     +   +TI+++  +  P+ +  + G    L + +K  +V 
Sbjct: 63  SLTKIMTAMLAIESGR-----MNDVVTITRDMIQVEPTKAGLRIGEKFYLRDLVKAAMVM 117

Query: 115 SANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           SAND A++I           FV  MN  +K LG++ T+F N  G     H++TA D+  +
Sbjct: 118 SANDAAMSIGVYLGDGNVNTFVAKMNRKAKQLGMNNTNFTNPCGFDIGDHHSTALDLLKM 177

Query: 174 SWRIKTD-----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           S     +       +   +        +       N  +  +  A G+KTG+T  +G  +
Sbjct: 178 SEYAIKNSQFNEMAKLKRHDFKSLNTKRAYAAYTHNKLLNNYKYAVGIKTGYTRKAGPCL 237

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           +A A  G++ ++ V+L +     R K   ++        T         K   +
Sbjct: 238 IARAKNGNKDVLVVMLNS---EQRWKDIKTIFEDVLPQLTKTAVQVPTQKPVKK 288


>gi|257466039|ref|ZP_05630350.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 381

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 10/240 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              + D   G++      D     AS+TK+MT  V F  ++  +A     + I+K+    
Sbjct: 137 AGLVAD-TRGNIYYSKNIDKKLPMASVTKVMTLLVTFDAIRNGEAHFDDKVVITKDVYNK 195

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLS 148
             S  + K G   TL + ++   + SAN+ A A+A+ + K +   F++ MN  ++ +G+S
Sbjct: 196 GGSGISMKPGEKFTLLDLIRATAIYSANNAAYAVAKHIGKGSIPNFIKKMNKKAREVGVS 255

Query: 149 ATH-FMNAHGVV-----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
               + +  G+      +     TAR +  LS      +P+YM    IK ++I   +   
Sbjct: 256 KEISYYSPAGLPTRYTKEPMDIGTARGIYKLSLEAI-KYPEYMEIAGIKQMKIHNGRISI 314

Query: 203 TNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N        G  G+KTG+   + +NI  ++  G +  I VILG      R+     LL 
Sbjct: 315 RNRNHLIGEEGIYGIKTGYHKEAKYNITVASKDGQREFIVVILGGNSYKDRDNAVLHLLD 374


>gi|167578731|ref|ZP_02371605.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis TXDOH]
          Length = 349

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 8/244 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S     +     ++D +TG  + +         AS+TKLMTA VV          L  P
Sbjct: 89  TSQPFGLRSNIVYMVDQHTGETLFDRNSQEVVPIASVTKLMTAMVVLDSKAP----LDEP 144

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     ST++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 145 IEVTDDDRDLDKFTGSRLAIGSTLSRDDMLHIALMASENRAAAALSRYYPGGREAFVAAM 204

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +++LG+  T+F N  G+ +H   T    + ++    +    +         ++   +
Sbjct: 205 NQKARSLGMVDTYFENPTGLSKHNVSTARDLVKMVEAAYQYPLIREYSTDLKYDVDTGLR 264

Query: 199 K--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  +       G  KTG+   SG  +V     G + ++ V+L +  R++    
Sbjct: 265 TLYYHSTNILLHDDAWDIGIQKTGYIKESGICLVMQTTIGGRDVVMVLLDSAGRHSDFFD 324

Query: 256 SASL 259
           +A L
Sbjct: 325 AARL 328


>gi|21282333|ref|NP_645421.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485514|ref|YP_042735.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297208633|ref|ZP_06925062.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300912725|ref|ZP_07130168.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21203770|dbj|BAB94469.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243957|emb|CAG42383.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296886888|gb|EFH25792.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300886971|gb|EFK82173.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           TCH70]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|333009575|gb|EGK29027.1| D-alanyl-D-alanine carboxypeptidase dacC domain protein [Shigella
           flexneri K-272]
 gi|333020502|gb|EGK39765.1| D-alanyl-D-alanine carboxypeptidase dacC domain protein [Shigella
           flexneri K-227]
          Length = 154

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 1/153 (0%)

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  +K LGL+ T F   HG+   G ++T RDMA+L   +  D P+     + K      
Sbjct: 1   MNGYAKKLGLTNTTFQTVHGLDAPGQFSTVRDMALLGKALIHDVPEEYAIHKEKEFTFNK 60

Query: 198 KKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
            + PN N     + L  DGMKTG T  +G+N+VASA QGD  LI+V+LGA     R   S
Sbjct: 61  IRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNES 120

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
             LL+ GF        I        Q+    + 
Sbjct: 121 EKLLTWGFRFFETVTPIKPDATFVTQRVWFGDK 153


>gi|323439395|gb|EGA97117.1| penicillin binding protein 4 [Staphylococcus aureus O11]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|296394587|ref|YP_003659471.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Segniliparus
           rotundus DSM 44985]
 gi|296181734|gb|ADG98640.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Segniliparus
           rotundus DSM 44985]
          Length = 407

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 13/266 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             +      P            + + D + G V+A   P   + PAS  K + A  V + 
Sbjct: 78  LASCGVVQPPGSPALPQGPAHGWLVADLDNGQVLAAEDPHGRFRPASTVKTLLALAVLNE 137

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--S 126
           L  K+ +  T    + +       +   + G+T ++ + L+  ++ S+N  A A+A    
Sbjct: 138 LDPKQLVQLTEGDQTAD---EESEHKFIQAGTTYSVFDLLEGALMVSSNGAANALARVLG 194

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQY 184
                   VQ MN+ +  LG   T      GV        ++  D+A++          +
Sbjct: 195 GPGGVAAAVQKMNSLADELGAKDTRATTPSGVEAPGGPSSSSPYDLALIFR-AAMKHADF 253

Query: 185 MHYFQIK----GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                 K              N N  +  + G  G KTG+T  +    V +A +G + L+
Sbjct: 254 RKIVGQKSVSMHGNPDDFPLVNDNAMLDDYPGMLGGKTGYTDDAEKTFVGAAERGRRRLV 313

Query: 241 AVIL-GALDRNTRNKVSASLLSMGFY 265
              + G    +T  + +A+LL  GF 
Sbjct: 314 VTQMYGLNGASTFREQAAALLDWGFS 339


>gi|228993740|ref|ZP_04153645.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
 gi|228765951|gb|EEM14600.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
          Length = 279

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 23/283 (8%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLS----------IAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++  ++I+ +A L     F S                  Y   +D NTG V+     + 
Sbjct: 1   MKRTIIMIVMIATLFTSMIFFSYTKRQKDVRSNQPDITGKYGVTIDANTGEVLYGKREEE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNA 107
              PAS+ K+MT  ++   +KE        ITI++NA +     +    + G  +  D A
Sbjct: 61  RSYPASVAKMMTTILLLENVKE-----DEEITITENAIKTESQSAKIKLRAGEKLKRDEA 115

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LKL+++ SA+ IA +IAE +  +++KFV+ MN  +K LG     F NA G    G+  + 
Sbjct: 116 LKLMLIISADPIAESIAEHIAGSKEKFVKMMNARAKELGTKHATFKNASGADALGNKVSP 175

Query: 168 RDMAILSWRIKTDFPQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCA 223
            D+AI++           +    +       +  K  N           A G K+G +  
Sbjct: 176 YDIAIITKEALKYPIVLEYMNTTRTTLHTSQRAPKIANYGREELYNDPYAIGSKSGLSAL 235

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
             + +V    +  + +I V+L +  R      +  +    F  
Sbjct: 236 GQYTVVTVDEKDGKRVINVVL-SSTRTQLYPDTKKMAHYAFKQ 277


>gi|15923632|ref|NP_371166.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926319|ref|NP_373852.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267101|ref|YP_001246044.1| Serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150393149|ref|YP_001315824.1| Serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156978970|ref|YP_001441229.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315285|ref|ZP_04838498.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255005435|ref|ZP_05144036.2| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795094|ref|ZP_05644073.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9781]
 gi|258418353|ref|ZP_05682618.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9763]
 gi|258419969|ref|ZP_05682927.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9719]
 gi|258430843|ref|ZP_05688555.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9299]
 gi|258441664|ref|ZP_05690936.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A8115]
 gi|258445900|ref|ZP_05694077.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A6300]
 gi|258449705|ref|ZP_05697807.1| penicillin binding protein 4 [Staphylococcus aureus A6224]
 gi|258454106|ref|ZP_05702078.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A5937]
 gi|269202263|ref|YP_003281532.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894406|ref|ZP_06302635.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus A8117]
 gi|282926504|ref|ZP_06334134.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus A10102]
 gi|295407421|ref|ZP_06817217.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus A8819]
 gi|296274707|ref|ZP_06857214.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297246543|ref|ZP_06930379.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus A8796]
 gi|13700533|dbj|BAB41830.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246411|dbj|BAB56804.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740170|gb|ABQ48468.1| Serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149945601|gb|ABR51537.1| Serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156721105|dbj|BAF77522.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257789066|gb|EEV27406.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9781]
 gi|257839146|gb|EEV63625.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9763]
 gi|257844052|gb|EEV68443.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9719]
 gi|257849515|gb|EEV73485.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A9299]
 gi|257852133|gb|EEV76060.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A8115]
 gi|257855476|gb|EEV78414.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A6300]
 gi|257857213|gb|EEV80112.1| penicillin binding protein 4 [Staphylococcus aureus A6224]
 gi|257863971|gb|EEV86727.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           A5937]
 gi|262074553|gb|ACY10526.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282591397|gb|EFB96469.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus A10102]
 gi|282763119|gb|EFC03250.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus A8117]
 gi|285816342|gb|ADC36829.1| D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein
           PBP4 [Staphylococcus aureus 04-02981]
 gi|294967702|gb|EFG43735.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus A8819]
 gi|297176574|gb|EFH35838.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus A8796]
 gi|312829136|emb|CBX33978.1| D-alanyl-D-alanine carboxypeptidase family protein [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315128480|gb|EFT84487.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329724987|gb|EGG61485.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|329729569|gb|EGG65970.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRSFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|269940219|emb|CBI48596.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|257427430|ref|ZP_05603829.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430061|ref|ZP_05606445.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432763|ref|ZP_05609123.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435667|ref|ZP_05611715.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903234|ref|ZP_06311125.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905021|ref|ZP_06312879.1| D-alanyl-D-alanine carboxypeptidase penicillin binding protein 5/6
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907979|ref|ZP_06315813.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910286|ref|ZP_06318090.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913479|ref|ZP_06321268.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282918432|ref|ZP_06326169.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus C427]
 gi|282923397|ref|ZP_06331077.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus subsp. aureus C101]
 gi|283957442|ref|ZP_06374895.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500526|ref|ZP_06666377.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293509471|ref|ZP_06668182.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus M809]
 gi|293524058|ref|ZP_06670745.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|297590466|ref|ZP_06949105.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           MN8]
 gi|257275623|gb|EEV07096.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279258|gb|EEV09859.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282178|gb|EEV12313.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284858|gb|EEV14977.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314265|gb|EFB44655.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Staphylococcus aureus subsp. aureus C101]
 gi|282317566|gb|EFB47938.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus C427]
 gi|282322511|gb|EFB52833.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325678|gb|EFB55986.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328224|gb|EFB58503.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331846|gb|EFB61357.1| D-alanyl-D-alanine carboxypeptidase penicillin binding protein 5/6
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282596189|gb|EFC01150.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           C160]
 gi|283790893|gb|EFC29708.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921021|gb|EFD98082.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291095531|gb|EFE25792.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291467568|gb|EFF10083.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus M809]
 gi|297576765|gb|EFH95480.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312438936|gb|ADQ78007.1| D-alanyl-D-alanine
           carboxypeptidase\/D-alanyl-D-alanine-endopeptidase
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194012|gb|EFU24406.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|258452851|ref|ZP_05700845.1| penicillin-binding protein 4 [Staphylococcus aureus A5948]
 gi|257859362|gb|EEV82216.1| penicillin-binding protein 4 [Staphylococcus aureus A5948]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|1125682|emb|CAA60585.1| penicillin binding protein 4 [Staphylococcus aureus]
 gi|1125686|emb|CAA60582.1| penicillin binding protein 4 [Staphylococcus aureus]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|325263916|ref|ZP_08130649.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
 gi|324030954|gb|EGB92236.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
          Length = 330

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 22/251 (8%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L D     V+  +       PAS TK+MTAYV   +       L   +T+  NA+++
Sbjct: 75  AAGLFDLKNEKVLYADKIHDRLYPASTTKVMTAYVTLKY-----GNLDDIVTVGPNATQF 129

Query: 90  PPSNSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    + G T TL + L  L++ S ND AVAIAE L  + + F   MN  +  LG 
Sbjct: 130 AADEQICGLQTGDTATLYDLLNGLVLYSGNDCAVAIAEHLAGSVEAFADMMNTEAAALGA 189

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL--------EIKGKK 199
           + THF+N HG+    HYTTA D+ ++      D        Q             ++ + 
Sbjct: 190 TNTHFVNPHGLQDDNHYTTAYDLYLMFNACVKDQRFLDIISQDSYTGTLTGADGTVRSEV 249

Query: 200 YPNTNWAVGT------FLGADGMKTGFTCASGFNIVASAIQGD-QSLIAVILGALDRNTR 252
           +  TN+           +   G KTG T  +G  ++  +        I++++GA  ++  
Sbjct: 250 WHPTNFYSQNLVPAPEGINVFGGKTGTTDEAGSCVILYSQDPQANPYISIVMGAETKDLL 309

Query: 253 NKVSASLLSMG 263
               ++L+S G
Sbjct: 310 YSQMSALMSAG 320


>gi|302332352|gb|ADL22545.1| Serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYIE 336


>gi|283469938|emb|CAQ49149.1| penicillin binding protein 4 [Staphylococcus aureus subsp. aureus
           ST398]
 gi|298693973|gb|ADI97195.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|229105624|ref|ZP_04236258.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228677894|gb|EEL32137.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 301

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 19/281 (6%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIA----------ETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++  ++I+ +A L     F S A           +    Y   +D +TG ++     D 
Sbjct: 23  MKRTIVMIVMIATLFTGMIFFSYAQRHQTVRGDQPSITGQYGITIDADTGEILYGKREDE 82

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS+ K+MT  ++   +KE + +  T   I    +E        + G  +  D ALK
Sbjct: 83  RSYPASIAKMMTTLLLLENVKENEEITVTENAI---KTESQSKKIKLRAGEKLKRDEALK 139

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           L+++ SA+ I+ +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D
Sbjct: 140 LMLIISADPISESIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYD 199

Query: 170 MAILSWRIKTDFPQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASG 225
           +AI++           +   +        +  K  N           A G K+G +    
Sbjct: 200 IAIITKEALKYPIVLQYMNSVHTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGK 259

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           + +V    +  + +I V+L +  R      +  +    F  
Sbjct: 260 YTVVTVDEKDGKRVINVVL-SSTRAQLYPDTKKMAHYAFKQ 299


>gi|57651483|ref|YP_185581.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161157|ref|YP_493332.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194413|ref|YP_499206.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|151220824|ref|YP_001331646.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161508904|ref|YP_001574563.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140859|ref|ZP_03565352.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|262048386|ref|ZP_06021271.1| penicillin binding protein 4 [Staphylococcus aureus D30]
 gi|262051768|ref|ZP_06023986.1| penicillin binding protein 4 [Staphylococcus aureus 930918-3]
 gi|282921932|ref|ZP_06329630.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus aureus A9765]
 gi|284023665|ref|ZP_06378063.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           132]
 gi|294849312|ref|ZP_06790055.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus aureus A9754]
 gi|304381746|ref|ZP_07364394.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|57285669|gb|AAW37763.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127131|gb|ABD21645.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201971|gb|ABD29781.1| penicillin-binding protein 4, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150373624|dbj|BAF66884.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160367713|gb|ABX28684.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|259160379|gb|EEW45405.1| penicillin binding protein 4 [Staphylococcus aureus 930918-3]
 gi|259163474|gb|EEW48031.1| penicillin binding protein 4 [Staphylococcus aureus D30]
 gi|282593785|gb|EFB98776.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus aureus A9765]
 gi|294823844|gb|EFG40270.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus aureus A9754]
 gi|302750541|gb|ADL64718.1| Serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304339697|gb|EFM05643.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315197613|gb|EFU27948.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|329313365|gb|AEB87778.1| Penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729882|gb|EGG66274.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 431

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|312867167|ref|ZP_07727377.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis F0405]
 gi|311097296|gb|EFQ55530.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis F0405]
          Length = 443

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/311 (20%), Positives = 121/311 (38%), Gaps = 40/311 (12%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-- 87
              ++D NTG+V+ ++  D P +PAS++KLMT Y++F  +   K    T I  + +    
Sbjct: 43  SSLIIDGNTGNVLWKDNIDEPRDPASMSKLMTLYLLFEDMASGKIGKDTVIKATASDQAI 102

Query: 88  ---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  +N+          +     ++  S     +            F++ MN  +K 
Sbjct: 103 GKIYEISNNNIVAGVDYTIPELITMTVVPSSNVSTLMLANLMSNNDPDAFIERMNAKAKE 162

Query: 145 LGLSATHFMNAHGVV---------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           LG++ T + N  G                    + TTARD+ IL +     +P  ++Y  
Sbjct: 163 LGMTNTVWNNPSGAAISTLQGYYPVNNYPNDAANQTTARDLGILVYHFINQYPDILNYTN 222

Query: 190 IKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLI 240
              + +K        +    +          G DG+KTG +    FN +A+  +G+Q LI
Sbjct: 223 QAQVTVKKGTPYEETFDTYNYSLPGAKYALKGVDGLKTGSSPRGAFNYIATIKRGNQRLI 282

Query: 241 AVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           AVI+G  D         R+    +L+   + +   +K ++  +     Q +  +   + +
Sbjct: 283 AVIMGVGDWADQDGEYYRHPFGNALIEKAYKDFGYKKLLDAGV-----QKIDGKTYTLEK 337

Query: 295 EVCTTQKEIIN 305
               T K+   
Sbjct: 338 PFYATVKKGAK 348


>gi|167616867|ref|ZP_02385498.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis Bt4]
 gi|257140788|ref|ZP_05589050.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
          Length = 349

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S     +     ++D +TG  + +         AS+TKLMTA VV          L  P
Sbjct: 89  TSQPFGLRSNIVYMVDQHTGETLFDRNSQEVVPIASVTKLMTAMVVLDSKAP----LDEP 144

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     ST++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 145 IEVTDDDRDLDKFTGSRLAIGSTLSRDDMLHIALMASENRAAAALSRYYPGGREAFVAAM 204

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + +TARD+  +            +   +K       
Sbjct: 205 NRKARSLGMVDTYFENPTGL-SKHNVSTARDLVKMVEAAYQYPLIREYSTDLKYDVDTGL 263

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V     G + ++ V+L +  R++   
Sbjct: 264 RTLYYHSTNILLHDDAWDIGIQKTGYIKESGICLVMQTTIGGRDVVMVLLDSAGRHSDFF 323

Query: 255 VSASL 259
            +A L
Sbjct: 324 DAARL 328


>gi|315917196|ref|ZP_07913436.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313691071|gb|EFS27906.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 388

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 10/240 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              + D   G++      D     AS+TK+MT  V F  ++  +A     + I+K+    
Sbjct: 144 AGLVAD-TRGNIYYSKNIDKKLPMASVTKVMTLLVTFDAIRNGEAHFDDKVVITKDVYNK 202

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLS 148
             S  + K G   TL + ++   + SAN+ A A+A+ + K +   F++ MN  ++ +G+S
Sbjct: 203 GGSGISMKPGEKFTLLDLIRATAIYSANNAAYAVAKHIGKGSIPNFIKKMNKKAREVGVS 262

Query: 149 ATH-FMNAHGVV-----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
               + +  G+      +     TAR +  LS      +P+YM    IK ++I   +   
Sbjct: 263 KEISYYSPAGLPTRYTKEPMDIGTARGIYKLSLEAI-KYPEYMEIAGIKQMKIHNGRISI 321

Query: 203 TNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N        G  G+KTG+   + +NI  ++  G +  I VILG      R+     LL 
Sbjct: 322 RNRNHLIGEEGIYGIKTGYHKEAKYNITVASKDGQREFIVVILGGNSYKDRDNAVLHLLD 381


>gi|258423292|ref|ZP_05686183.1| penicillin-binding protein 4 [Staphylococcus aureus A9635]
 gi|257846353|gb|EEV70376.1| penicillin-binding protein 4 [Staphylococcus aureus A9635]
          Length = 431

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDFAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|15618582|ref|NP_224868.1| D-Ala-D-Ala carboxypeptidase [Chlamydophila pneumoniae CWL029]
 gi|15836204|ref|NP_300728.1| D-Ala-D-Ala carboxypeptidase [Chlamydophila pneumoniae J138]
 gi|16752369|ref|NP_444627.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila pneumoniae AR39]
 gi|33242029|ref|NP_876970.1| serine-type D-Ala-D-Ala carboxypeptidase [Chlamydophila pneumoniae
           TW-183]
 gi|4376972|gb|AAD18811.1| D-Ala-D-Ala Carboxypeptidase [Chlamydophila pneumoniae CWL029]
 gi|7189011|gb|AAF37962.1| D-alanyl-D-alanine carboxypeptidase [Chlamydophila pneumoniae AR39]
 gi|8979044|dbj|BAA98879.1| D-Ala-D-Ala carboxypeptidase [Chlamydophila pneumoniae J138]
 gi|33236539|gb|AAP98627.1| serine-type D-Ala-D-Ala carboxypeptidase [Chlamydophila pneumoniae
           TW-183]
          Length = 436

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 59/300 (19%), Positives = 106/300 (35%), Gaps = 36/300 (12%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M++ F   + +    +       A       +     ++  ++G V  +   D    PAS
Sbjct: 1   MKRPFFTYLCIIFYGSCASLSLHAGLSFPEVRGATAAVVHADSGKVFYDKDIDAVIYPAS 60

Query: 56  LTKLMTAYVVFSFLKEKKAML-----------------TTPITISKNASEYPPSNSTFKK 98
           +TK+ TA  +          L                  +      +  E   S      
Sbjct: 61  MTKIATALFILKHYPTVLDTLIKVKQDAIASITPQAKKQSGYRSPPHWLETDGSTIQLHL 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK-NLGLSATHFMNAHG 157
              +   +    L+V SAND A  +A + C + +KF+  +N   K  +G + THF N HG
Sbjct: 121 REELLGWDLFHALLVCSANDAANVLAMACCGSVEKFMDKLNFFLKEEIGCTHTHFNNPHG 180

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP------NTNW-----A 206
           +    HYTT RD+  +      + P +         +I             TN      +
Sbjct: 181 LHHPNHYTTTRDLISIMRCALKEPP-FRGVISTTSYKIGATNLHGERILSPTNKLLLPGS 239

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR-NTRNKVSASLLSMGFY 265
              +  A G KTG T  +G N++ +A + ++ L+ +  G     +   +   +L    F 
Sbjct: 240 TYHYPPALGGKTGTTKTAGKNLIMAAEKNNRLLVTIATGYSGPVSDLYQDVIALCETVFN 299


>gi|152977277|ref|YP_001376794.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152026029|gb|ABS23799.1| Serine-type D-Ala-D-Ala carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 279

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 108/269 (40%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F+ +I  +         +        Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 15  FIGMIFFSYAQRQKNIRADQPPITGKYGITIDADTGEILYGKREDERSYPASIAKIMTTI 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +K+        ITI++NA +            G  +  D ALKL+++ SA+ ++ 
Sbjct: 75  LLLENVKK-----DEEITITENAIKTESQSKKIKLHAGEKLKRDEALKLMLIISADPVSE 129

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++++FV+ MN  +K LG     F NA G    G+  +  D+AIL+       
Sbjct: 130 SIAEHIAGSKEEFVKMMNTRAKELGTKHATFKNASGADALGNKVSPYDIAILTKEALKYP 189

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +    +       +  K  N           A G K+G +    + +V    +  +
Sbjct: 190 IVLKYMNTTRTTLHTSERTVKLANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKEGK 249

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R+     +  +       
Sbjct: 250 RVITVVL-SSTRHELYPDTKKMAHYALKQ 277


>gi|257791061|ref|YP_003181667.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Eggerthella
           lenta DSM 2243]
 gi|317488221|ref|ZP_07946790.1| D-alanyl-D-alanine carboxypeptidase [Eggerthella sp. 1_3_56FAA]
 gi|257474958|gb|ACV55278.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Eggerthella
           lenta DSM 2243]
 gi|316912663|gb|EFV34203.1| D-alanyl-D-alanine carboxypeptidase [Eggerthella sp. 1_3_56FAA]
          Length = 349

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 32/275 (11%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    L+D + G +      D     ASLTK+MTA V            +T I ++
Sbjct: 54  PDFDASCAALMDED-GTLWFGRNADDAAQIASLTKIMTAIVAAD-----WLDASTMIEVT 107

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND--------------IAVAIAESLCK 129
             A+    S++   +G +MT D+ALK L+  S ND                         
Sbjct: 108 PEAASVGESSAGLAQGDSMTFDDALKALLTASGNDAASAIAQAAGARMLAQEGSGGDAYA 167

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKT----DF 181
            E  FV+ MN  +  LGL  + F N HG+       G Y+ A D+A +            
Sbjct: 168 CEAAFVEAMNAKAAELGLENSFFANPHGLDFDAFAQGQYSCAADVATMLRAAMQIDLVRA 227

Query: 182 PQYMHYFQIKGLEIKGKK---YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQ 237
                   I              NT+  +G++ GA   KTG+T A+G    ++  +    
Sbjct: 228 NIGFSQADITVQRDGAPVTLALENTDALLGSYPGACAAKTGYTLAAGPCAASAVNRGDGH 287

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
              AV+LG+  +  R   SA+L    + N++  + 
Sbjct: 288 KYYAVVLGSSSKPQRFVDSAALYDWAYANRSSLRA 322


>gi|214090056|gb|ACJ63448.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Ochrobactrum sp.
           11a]
          Length = 199

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 3/169 (1%)

Query: 8   IAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           + +A+++      +              ++D NTG  +  +  D    PASLTK+MT Y+
Sbjct: 20  LLLAVVTGCSTASTTIPAIAASDRYAAIVIDANTGKTLFASNADAQRYPASLTKMMTLYM 79

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +F  ++  +    T I +S  A+  PP+   F+ G ++  ++A   +I KSAND+A A+ 
Sbjct: 80  LFEAMQAGRMNKDTRIPVSAYAAARPPTKIGFRSGQSIRAEDAALAMITKSANDVATAVG 139

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           E +  +E++F Q M   ++ LG+  T F NA G+     +TTARDMAIL
Sbjct: 140 EYIGGSEERFAQMMTAKARRLGMRNTTFRNASGLPNMAQHTTARDMAIL 188


>gi|229099467|ref|ZP_04230396.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|229118482|ref|ZP_04247836.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228665052|gb|EEL20540.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228683963|gb|EEL37912.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 301

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 104/267 (38%), Gaps = 8/267 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +             +    Y   +D +TG ++     D    PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQTVRVDQPSITGQYGITIDADTGEILYGKREDERSYPASIAKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           ++   +KE + +  T   I    +E        + G  +  D ALKL+++ SA+ I+ +I
Sbjct: 97  LLLENVKENEEITVTENAI---KTESQSKKIKLRAGEKLKRDEALKLMLIISADPISESI 153

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++         
Sbjct: 154 AEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKEALKYPIV 213

Query: 184 YMHYFQ---IKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
             +            +  K  N           A G K+G +    + +V    +  + +
Sbjct: 214 LQYMNSVNTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGKRV 273

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYN 266
           I V+L +  R      +  +    F  
Sbjct: 274 INVVL-SSTRAQLYPDTKKMAHYAFKQ 299


>gi|323465190|gb|ADX77343.1| penicillin binding protein 4 [Staphylococcus pseudintermedius ED99]
          Length = 425

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 150/373 (40%), Gaps = 50/373 (13%)

Query: 1   MRQFLVIIAMAMLSN------IFPFLSIAETNKLPYYT----------LLDT-NTGHVIA 43
           M++ ++ I +   ++         +                       +++   TG ++ 
Sbjct: 1   MKKIILSIVVVFFASTIITPFARAYTPTPVELAQQSGYPVTWAYQPEGMINISQTGQILY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
           E   +  W PAS+TKLMT Y+    +KEKK  L   + I+            SN+    G
Sbjct: 61  EFQSEQQWYPASMTKLMTMYLTLQAVKEKKLSLNDTVQITDQHYRMSTLPELSNTKLYPG 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T T+   L++ +  S+N  A+ +A  +  +   FV  MN+T+K+LG++ TH++N  G  
Sbjct: 121 ETYTVAELLQITVSASSNAAALILANQVSDSTSDFVDKMNDTAKSLGMTHTHYVNPTGAE 180

Query: 160 QH--------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN- 204
                              ++ARD AIL+  +  D P+ +++ +       G  Y   N 
Sbjct: 181 NRLLLEFAPKKYQHESSSTSSARDYAILAQHVVKDTPKILYFTKQIAPTQHGVTYYTFND 240

Query: 205 ---WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKV 255
                  +  G DG+KTG +  + +N   +  +G   +  +I+GA D         RN +
Sbjct: 241 LLEGGNMSLPGTDGLKTGSSDIADYNNSLTTKRGKFRIFHIIMGAGDYKNLGGEKQRNMM 300

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           SAS ++  F     +K ++       +  +  +   ++E++     + ++    +     
Sbjct: 301 SASAINYTFSQYDYKKILSKG-----KHKIDGKSYYVTEDLYDVVPKDMSKPYHLVVKDS 355

Query: 316 KESHFIDFEKITL 328
           +       + IT 
Sbjct: 356 QVHLDYPRKFITK 368


>gi|319891642|ref|YP_004148517.1| D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein
           PBP4 [Staphylococcus pseudintermedius HKU10-03]
 gi|317161338|gb|ADV04881.1| D-alanyl-D-alanine carboxypeptidase / Penicillin binding protein
           PBP4 [Staphylococcus pseudintermedius HKU10-03]
          Length = 425

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 150/373 (40%), Gaps = 50/373 (13%)

Query: 1   MRQFLVIIAMAMLSN------IFPFLSIAETNKLPYYT----------LLDT-NTGHVIA 43
           M++ ++ I +   ++         +                       +++   TG ++ 
Sbjct: 1   MKKIILSIVVVFFASTIITPFARAYTPTPVELAQQSGYPVTWAYQPEGMINISQTGQILY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
           E   +  W PAS+TKLMT Y+    +KEKK  L   + I+            SN+    G
Sbjct: 61  EFQSEQQWYPASMTKLMTMYLTLQAVKEKKLSLNDTVQITDQHYRMSTLPELSNTKLYPG 120

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T T+   L++ +  S+N  A+ +A  +  +   FV  MN+T+K+LG++ TH++N  G  
Sbjct: 121 ETYTVAELLQITVSASSNAAALILANQVSDSTSDFVDKMNDTAKSLGMTHTHYVNPTGAE 180

Query: 160 QH--------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN- 204
                              ++ARD AIL+  +  D P+ +++ +       G  Y   N 
Sbjct: 181 NRLLLEFAPKKYQHESSSTSSARDYAILAQHVVKDTPKILYFTKQIAPTQHGVTYYTFND 240

Query: 205 ---WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------RNTRNKV 255
                  +  G DG+KTG +  + +N   +  +G   +  +I+GA D         RN +
Sbjct: 241 LLEGGNMSLPGTDGLKTGSSDIADYNNSLTTKRGKFRIFHIIMGAGDYKHLGGEKQRNMM 300

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           SAS ++  F     +K ++       +  +  +   ++E++     + ++    +     
Sbjct: 301 SASAINYTFSQYDYKKIVSKG-----KHKIDGKSYYVTEDLYDVVPKDMSKPYHLVVKDS 355

Query: 316 KESHFIDFEKITL 328
           +       + IT 
Sbjct: 356 QVHLDYPRKFITK 368


>gi|169351003|ref|ZP_02867941.1| hypothetical protein CLOSPI_01780 [Clostridium spiroforme DSM 1552]
 gi|169292065|gb|EDS74198.1| hypothetical protein CLOSPI_01780 [Clostridium spiroforme DSM 1552]
          Length = 342

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/308 (20%), Positives = 121/308 (39%), Gaps = 11/308 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  +   Y +++ +   VI  +  D+  + AS++K+MT  +    +      L T 
Sbjct: 24  SVKPVEFQGKSYIVMEASNQVVIEGSNEDYIQSVASISKIMTCILAIENMD-----LDTI 78

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           IT+    ++   S      G  ++L + L  L+++S ND A+ IA+++ K   KFV  MN
Sbjct: 79  ITVDDTINKAWGSGIYIHIGDKISLRDLLYGLMLRSGNDAALMIAKAVAKDVPKFVDMMN 138

Query: 140 NTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFPQYMH-YFQIKGLEIK 196
           + ++ L L  T F N  G+    +G+ +T  DMA L      +         +    E  
Sbjct: 139 DKARELELHNTTFSNPTGLDEEDNGNQSTVYDMARLMAYCHQNPIFNEIVKTKEYVREDG 198

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
              + N N  +  +    G KTGFT  +   ++  A +    LI V     +     +  
Sbjct: 199 NGTWHNKNKLLTNYKYCIGGKTGFTKKARRTLITMARKNGLDLIIVTFNCGND---FEFH 255

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
                  F    + K  +  I +F QQ    ++     +  + + ++   N ++  + + 
Sbjct: 256 QKKYEECFDLLEETKIFSRGIVEFKQQKYYLDLDLFVNKKDSDKVDVSFDNNEIIISLNN 315

Query: 317 ESHFIDFE 324
           +       
Sbjct: 316 QPIRKQKV 323


>gi|289551493|ref|YP_003472397.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus lugdunensis HKU09-01]
 gi|289181024|gb|ADC88269.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus lugdunensis HKU09-01]
          Length = 432

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 134/354 (37%), Gaps = 51/354 (14%)

Query: 1   MRQFLVIIAMAML----SNIFPFLSIAETNKLPYYTL-----------LDTN-------T 38
           M++  +I+ + ++       + F + ++    P                D         T
Sbjct: 1   MKKIFIILILVLVSFTQFTPYLFAAESDAVLSPSQIATQYGYTGITAAYDPEGAINVSQT 60

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNS 94
           G ++   + +  W  AS+TKLMT Y+    +K+    L   + I++N          SN+
Sbjct: 61  GQILYNYHGNKKWYLASMTKLMTMYLTLEAVKKGDLSLDDKVKITQNHYRMSTLPELSNT 120

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
               G   T+   L++ +  S+N  A+ +A  +      F + MN  +K LG++ T+F N
Sbjct: 121 KLYPGEVYTIAELLQITVSNSSNAAALILANKVSGNVTSFTKLMNKKAKELGMTHTYFTN 180

Query: 155 AHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             G                 +   +TA+D AIL   +  D P  +H+ +       G  Y
Sbjct: 181 PTGAENTQLQEFAPKLTTNDNNSTSTAKDYAILDQHVIADTPNILHFTKQLAPTQHGVTY 240

Query: 201 PNTNWAVG----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDRN 250
              N ++     +  G DG+KTG +  + +N   +  +G   +  VILG           
Sbjct: 241 YTFNHSLEGASLSLPGTDGLKTGSSDIANYNHTITTKRGKFRINQVILGVGDYNNLGGEK 300

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEII 304
            RNK+  +++   F     +K ++   +            ++ + +  T     
Sbjct: 301 ERNKMGNAIMESSFNQYAYKKVLSKG-EHNINGKTYYIKKDLYDVIPKTLHAKD 353


>gi|60101256|gb|AAX13706.1| penicillin-binding protein 4 [Staphylococcus aureus]
          Length = 431

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   + ++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVRMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL  R+  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLRVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|83717156|ref|YP_440158.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
 gi|83650981|gb|ABC35045.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
          Length = 373

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 8/244 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S     +     ++D +TG  + +         AS+TKLMTA VV          L  P
Sbjct: 113 TSQPFGLRSNIVYMVDQHTGETLFDRNSQEVVPIASVTKLMTAMVVLDSKAP----LDEP 168

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     ST++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 169 IEVTDDDRDLDKFTGSRLAIGSTLSRDDMLHIALMASENRAAAALSRYYPGGREAFVAAM 228

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N  +++LG+  T+F N  G+ +H   T    + ++    +    +         ++   +
Sbjct: 229 NRKARSLGMVDTYFENPTGLSKHNVSTARDLVKMVEAAYQYPLIREYSTDLKYDVDTGLR 288

Query: 199 K--YPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  +       G  KTG+   SG  +V     G + ++ V+L +  R++    
Sbjct: 289 TLYYHSTNILLHDDAWDIGIQKTGYIKESGICLVMQTTIGGRDVVMVLLDSAGRHSDFFD 348

Query: 256 SASL 259
           +A L
Sbjct: 349 AARL 352


>gi|229076391|ref|ZP_04209356.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
 gi|228706826|gb|EEL59034.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-18]
          Length = 301

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 19/281 (6%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIA----------ETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++  ++I+ +A L     F S A           +    Y   +D +TG ++     D 
Sbjct: 23  MKRTIVMIVMIATLFTGMIFFSYAQRHQTVRGDQPSITGQYGITIDADTGEILYGKREDE 82

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS+ K+MT  ++   +KE + +  T   I    +E        + G  +  D ALK
Sbjct: 83  RSYPASIAKMMTTLLLLENVKENEEITVTENAI---KTESQSKKIKLRAGEKLKRDEALK 139

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           L+++ SA+ I+ +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D
Sbjct: 140 LMLIISADPISESIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYD 199

Query: 170 MAILSWRIKTDFPQYMHYFQ---IKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASG 225
           +AI++           +            +  K  N           A G K+G +    
Sbjct: 200 IAIITKEALKYPIVLQYMNSVNTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGK 259

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           + +V    +  + +I V+L +  R      +  +    F  
Sbjct: 260 YTVVTVDEKDGKRVINVVL-SSTRAQLYPDTKKMAHYAFKQ 299


>gi|321472931|gb|EFX83900.1| hypothetical protein DAPPUDRAFT_315307 [Daphnia pulex]
          Length = 285

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 6/234 (2%)

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L+ +IV+S ND  + + E L  +E+ FV  MN  +K LG   THF+N+ G  + GH +
Sbjct: 13  DLLQGIIVQSGNDACIVVTEGLAGSEENFVSQMNQKAKELGAINTHFLNSTGWPERGHTS 72

Query: 166 TARDMAILSWRIKTDFPQYMH-YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T RD+ +   R   DFP++   Y+        G +  N N  +   LG DG+KTG T   
Sbjct: 73  TPRDLMLFGIRTIRDFPEFYKIYYSQLEFTYNGIRQNNRNPLLYNKLG-DGLKTGHTDEG 131

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
           GF +  S  +GD+ LI VI G  +  TR + ++ +L+ G  +       +          
Sbjct: 132 GFGLAGSGQRGDRRLIFVINGLKNDKTRAETASKMLNYGMDSFEAITLYSQDAVVEEMPL 191

Query: 285 LSNEVPNIS----EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                 NIS    + +  + K   N   +    K   +  +  EK  +L + + 
Sbjct: 192 SGASQSNISLVTIKPIIISVKRGYNDQIKKNIIKKPGAFKLPIEKGKILADLVV 245


>gi|257462931|ref|ZP_05627336.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. D12]
 gi|317060551|ref|ZP_07925036.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. D12]
 gi|313686227|gb|EFS23062.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. D12]
          Length = 379

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 10/240 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              + DT  G++      D     AS+TK+MT  V F  ++  +A L   + I+K+    
Sbjct: 135 AGLVADTK-GNIYYSKNIDKKLPMASVTKVMTLLVTFDAIRNGEAHLEDKVVITKDVYNK 193

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLS 148
             S  + K G T TL + ++   + SAN+ A A+A+ + K +   F++ MN  ++ +G+S
Sbjct: 194 GGSGISMKPGETFTLLDLIRATAIYSANNAAYAVAKHIGKGSISNFIKKMNKKAREMGIS 253

Query: 149 ATH-FMNAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
               + +  G+            TAR +  LS      +P+YM    IK ++I   K   
Sbjct: 254 KEISYYSPAGLPSRYTKEPMDIGTARGIYKLSLEAI-KYPEYMKIAGIKQMKIHHGKINI 312

Query: 203 TNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            N        G  G+KTG+   + +NI  ++  G +  I VILG      R+     LL 
Sbjct: 313 RNRNHLIGEEGIYGIKTGYHKEAKYNITVASKDGSREFIVVILGGESYKDRDNAVLRLLE 372


>gi|169828716|ref|YP_001698874.1| penicillin-binding protein dacF [Lysinibacillus sphaericus C3-41]
 gi|168993204|gb|ACA40744.1| Penicillin-binding protein dacF precursor (D-alanyl-D-alanine
           carboxypeptidase) [Lysinibacillus sphaericus C3-41]
          Length = 266

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 95/229 (41%), Gaps = 5/229 (2%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
            +       LL+   G V+ E   D    PASLTK+MTA V      + +          
Sbjct: 20  PSLHSKNALLLNEQ-GEVLFEKNADAIIYPASLTKIMTAIVAIEMTDDLQMQTIVKPQTI 78

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              +    S + F  G  +T+++ L   ++ S  D +  +AE++  +E +FV +MNN ++
Sbjct: 79  AKYTAQNASMAGFHAGDFVTIEDLLYGTLLASGADASGTLAEAIAGSEDEFVTYMNNKAQ 138

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            LG+  THF+N  G+ +  H ++ +D++ L      +   Y  +               +
Sbjct: 139 ELGMDTTHFVNTSGLHEEAHVSSLQDISKLLRYALENPTFYRIFTSKTYTTHVPTALLIS 198

Query: 204 NWAVGTFLGADGM----KTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
           N       G DG     KTG+T  +G  + +   +  +  + +   A  
Sbjct: 199 NSLFTRMPGMDGTILGGKTGYTPEAGLCLASLMEKDGRKFLFITTNAPG 247


>gi|49482870|ref|YP_040094.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295427185|ref|ZP_06819821.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|49240999|emb|CAG39669.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295128973|gb|EFG58603.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 431

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K +    +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILPKGEQRINGKKYYVE 336


>gi|257424761|ref|ZP_05601188.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257272331|gb|EEV04454.1| penicillin-binding protein 4 [Staphylococcus aureus subsp. aureus
           55/2053]
          Length = 455

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|186476224|ref|YP_001857694.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           phymatum STM815]
 gi|184192683|gb|ACC70648.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           phymatum STM815]
          Length = 387

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 8/247 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              A   +     ++D NT   + +         AS+TKLMTA VV          +   
Sbjct: 126 TPDALMLRSSVAYVVDQNTSESLFDKNSRAVVPIASITKLMTAMVVLDSKAAMTEQIEVT 185

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               ++      + S    GS ++ ++ L + ++ S N  A A++         F+  MN
Sbjct: 186 D---EDRDYEKNTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYFPGGRPAFMAAMN 242

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---K 196
             +K LG++ THF N  G+    + ++ARD+  +                         +
Sbjct: 243 AKAKALGMTDTHFENPTGLTS-QNVSSARDLVKMVNAAYQYPLIRKFSTDRSYEVYTGKR 301

Query: 197 GKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              Y +TN  V       G  KTGF   +G  +V  A   D+ +I V+L +  + +R   
Sbjct: 302 SIAYNSTNALVRNPSWEIGLQKTGFINEAGECLVMQATIHDRPMIMVLLDSSGKYSRFAD 361

Query: 256 SASLLSM 262
           +  L + 
Sbjct: 362 AQRLRTW 368


>gi|1864022|gb|AAB50178.1| pencillin binding protein 4 [Staphylococcus aureus]
          Length = 431

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHGVVQHGHYT--------------TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G       T              TARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQEATVSTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|313682994|ref|YP_004060732.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Sulfuricurvum
           kujiense DSM 16994]
 gi|313155854|gb|ADR34532.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sulfuricurvum
           kujiense DSM 16994]
          Length = 266

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 12/240 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           K+    + D  +  ++    P    +PASLTK+MTA +     K     L  P+TI++  
Sbjct: 29  KVEALLVKDMTSKQMLYSKEPFKELHPASLTKVMTALLAIEHGK-----LNQPVTITREM 83

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           ++  P+ + +++G  + L++ +K  ++KS ND A AIA S+  +E+ FV+ MN  +K +G
Sbjct: 84  TKVEPTIAGYRRGDVIILEDLIKAAMIKSDNDAAKAIAISIGGSEEHFVEMMNAKAKKIG 143

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYP 201
           ++ THFMN  G     HY+T +D+  ++          D  +   +      + +     
Sbjct: 144 MNHTHFMNPCGYDDKKHYSTPQDLLKMTEYAIKNKKFNDISRLNEHTYYSLNKHRKFYAY 203

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             N  +  +  A G+KTG+T  +G  ++A A +  +  + V++ A     R K + ++  
Sbjct: 204 THNRLLNRYQYAVGVKTGYTAKAGPCLIARAKKDGKDCVIVMMNAKG--DRWKTAKNIFE 261


>gi|34557129|ref|NP_906944.1| penicillin-binding protein [Wolinella succinogenes DSM 1740]
 gi|34482844|emb|CAE09844.1| PENICILLIN-BINDING PROTEIN [Wolinella succinogenes]
          Length = 283

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 13/251 (5%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              +     N++    + D +   ++          PASLTK+MTA +     K     +
Sbjct: 22  LAPVVEKFENQIESLIIKDLSNKKILYAKETHKEVRPASLTKIMTAILAIESGK-----M 76

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
              +TI+   +   PS + FK G    L + +K  +++SAND A  I   +  + + FV+
Sbjct: 77  NEVVTITPEMTLVEPSKAGFKVGEKFYLRDLVKSALIQSANDSATGIGIFVGGSSENFVK 136

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF------PQYMHYFQI 190
            MN  +K LG+  T+F NA G     H +TA D+ +L+     +           H F  
Sbjct: 137 MMNKKAKALGMKETNFTNAAGFDIGDHLSTAHDLMLLAEYAIKNKSFNEIVKMNKHTFSP 196

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
              + K       N  + T     G+KTG+T  +G  ++A A +G++ L+ V+L    + 
Sbjct: 197 INNKNKIYTSWTHNKLLRTHKYTIGIKTGYTSKAGPCLIARAKKGEKDLLLVMLN--SKE 254

Query: 251 TRNKVSASLLS 261
            R K + ++  
Sbjct: 255 NRWKSAQAIFD 265


>gi|254500365|ref|ZP_05112516.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
 gi|222436436|gb|EEE43115.1| D-alanyl-D-alanine carboxypeptidase family [Labrenzia alexandrii
           DFL-11]
          Length = 320

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 119/206 (57%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MTA + F  L+     L+TP+ +S NA +   + +  K G+ MTL++AL  ++V SAN++
Sbjct: 1   MTALITFQALERGDVDLSTPVILSHNAMDQSAAYAGLKVGNAMTLEDALYAVLVGSANEV 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVA+AE++  TE  FV  MN  +  LGL+ATHF N +G+       +ARD+A+L   +  
Sbjct: 61  AVALAETVAGTEAAFVDLMNAQADRLGLTATHFTNPNGLFDQKQTVSARDLAVLGRDLFQ 120

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
            +P Y   F+   + I  K+  + N  +  + G  G+KTGF C++G NIVA A +  + L
Sbjct: 121 VYPDYRRMFRTAAVTIDDKELISYNELITRYPGTLGLKTGFVCSAGRNIVAIAERDGKRL 180

Query: 240 IAVILGALDRNTRNKVSASLLSMGFY 265
           +AV+LGA     R++ +A L    F 
Sbjct: 181 LAVVLGATTGRERSERTAKLFDDAFA 206


>gi|313200023|ref|YP_004038681.1| peptidase s11 d-alanyl-d-alanine carboxypeptidase 1 [Methylovorus
           sp. MP688]
 gi|312439339|gb|ADQ83445.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylovorus
           sp. MP688]
          Length = 330

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 12/249 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++  TG V+     D     AS+TKLMTA V+          +   +
Sbjct: 76  PSNLQLASSKALIVNQETGEVLYAKSVDQATPIASVTKLMTAMVMLDA----HLPMDELL 131

Query: 81  TISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           TI++   +    ++S  + G+T+T    L L ++ S N  A A+  +       F++ MN
Sbjct: 132 TINEADVDTLKGTSSRLRLGTTLTRAEMLHLALMSSENRAASALGRNYPGGLTAFIRAMN 191

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
             +  LG++ + F++  G+    + +TA D+  +                          
Sbjct: 192 AKASMLGMAHSQFVDPTGL-NSANISTAEDLVKMVRAAYQYPEIRQVSTSASQEVPVYGL 250

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                + NTN  V       G  KTGF   +G  +V  A    Q +I V+L +  + +R 
Sbjct: 251 RNPINFVNTNVLVRNSDWVIGLSKTGFINEAGRCLVMQAEIAGQPMIIVLLDSYGKYSRI 310

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 311 GDAQRIRKW 319


>gi|253997956|ref|YP_003050019.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylovorus
           sp. SIP3-4]
 gi|253984635|gb|ACT49492.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Methylovorus
           sp. SIP3-4]
          Length = 330

 Score =  110 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 95/249 (38%), Gaps = 12/249 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                       +++  TG V+     D     AS+TKLMTA V+          +   +
Sbjct: 76  PSNLQLASSKALIVNQETGEVLYAKSVDQATPIASVTKLMTAMVMLDA----HLPMDELL 131

Query: 81  TISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           TI++   +    ++S  + G+T+T    L L ++ S N  A A+  +       F++ MN
Sbjct: 132 TINEADVDTLKGTSSRLRLGTTLTRAEMLHLALMSSENRAASALGRNYPGGLTAFIRAMN 191

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
             +  LG++ + F++  G+    + +TA D+  +                          
Sbjct: 192 AKASMLGMAHSQFVDPTGL-NSANISTAEDLVKMVRAAYQYPEIRQVSTSASQEVPVYGL 250

Query: 196 -KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
                + NTN  V       G  KTGF   +G  +V  A    Q +I V+L +  + +R 
Sbjct: 251 RNPINFVNTNVLVRNSDWVIGLSKTGFINEAGRCLVMQAEIAGQPMIIVLLDSYGKYSRI 310

Query: 254 KVSASLLSM 262
             +  +   
Sbjct: 311 GDAQRIRKW 319


>gi|154504396|ref|ZP_02041134.1| hypothetical protein RUMGNA_01900 [Ruminococcus gnavus ATCC 29149]
 gi|153795325|gb|EDN77745.1| hypothetical protein RUMGNA_01900 [Ruminococcus gnavus ATCC 29149]
          Length = 345

 Score =  110 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 24/249 (9%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYP 90
           L D    +V+  +    P  PAS TK+MTAYV   +       L   +T+S+        
Sbjct: 99  LFDVQGKNVLYADQIFEPLYPASTTKIMTAYVALKY-----GNLDDIVTVSERATDFAED 153

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                 + G  ++L + L  L++ S ND AVAIAE +  + + FV  MN  ++NLG + T
Sbjct: 154 EQVCGLQAGDQLSLRDLLNGLLLYSGNDCAVAIAEHVSGSVEAFVDKMNEEARNLGATGT 213

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK---------GKKYP 201
           HF+N HG+    HYTTA D+ ++      + PQ++                       + 
Sbjct: 214 HFVNPHGLQNEDHYTTAYDLYLMFNACLQN-PQFVEMISQTSYTANLTSASGVPYTMTWE 272

Query: 202 NTNWAVGTF----LGAD--GMKTGFTCASGFNIVASAI-QGDQSLIAVILGALDRNTRNK 254
            TN+          G    G KTG T  +G  +V     Q  +  I++++GA  ++    
Sbjct: 273 PTNYYASGDAAAPEGVKVIGGKTGTTDEAGSCLVLYEQDQQGRPYISIVMGASQKSILYD 332

Query: 255 VSASLLSMG 263
               L+S G
Sbjct: 333 NMTRLMSSG 341


>gi|324497314|gb|ADY39464.1| D-alanyl-D-alanine endopeptidase [bacterium enrichment culture
           clone P69-9E]
          Length = 258

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 12/233 (5%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNST 95
           NT  VI  ++PD     AS+TKLMTA VV          L   + +   +  E     S 
Sbjct: 1   NTNKVIYASHPDLVRPIASITKLMTAMVVLDA----HLPLDEKLKVDISHTPEMKGIYSR 56

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
            +  S ++  N L L ++ S N  A ++A         F++ MN  +K LG++ TH++  
Sbjct: 57  VRLNSEISRKNMLLLALMSSENRAAASLAHHYPGGYDAFIRAMNAKAKALGMTNTHYVEP 116

Query: 156 HGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
            G+    + +TARD+  L      + +                      + NTN  V   
Sbjct: 117 TGL-SINNVSTARDLTKLLIASKQYPLIGQLSTTREEMATFANPAYTLPFRNTNHLVYRD 175

Query: 211 LG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                  KTGFT A+G  +V   +   + +  V++ A  + T    ++ L + 
Sbjct: 176 NWNIQLTKTGFTNAAGHCLVMRTVFNGKPVALVVMDAFGKYTHFADASRLRTW 228


>gi|260583975|ref|ZP_05851723.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella elegans
           ATCC 700633]
 gi|260158601|gb|EEW93669.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella elegans
           ATCC 700633]
          Length = 464

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 137/339 (40%), Gaps = 50/339 (14%)

Query: 3   QFLVIIAMAMLSNIFPFLSIA----------------ETNKLPYYTLLDTNTGHVIAENY 46
           +F   I++  L  +   ++                    +K     ++D  TG ++ ++ 
Sbjct: 27  KFFGTISVLCLIGLVKPIAAETVDIVELTKNAGYEVNPDDKPKSSIVVDAYTGRILWQDN 86

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTM 102
            D   +PAS++K++T Y+V   +++ +  L+  IT +K      + Y  SN+   +G   
Sbjct: 87  IDEERDPASISKVLTVYLVMEAIQKGELSLSQKITATKEDEAISNIYAISNNKIIEGVEY 146

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG----- 157
            ++  +K+ +V S+N   + +A +L K    F+  MN  +K LG++ T F NA G     
Sbjct: 147 PIEELIKMTLVPSSNAATIMLANTLDKDSAAFIGKMNAKAKELGMNHTTFNNASGAVAEL 206

Query: 158 ----------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                          + TTARD+AIL+  +   +PQ + Y     ++          +  
Sbjct: 207 FQGYYQPEGYDASKPNQTTARDLAILAMDLMNHYPQVLQYTNSAVVKTMEGTPYEEKFDT 266

Query: 208 GTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             +          G +G+KTG +    FN +A+  +    L+ V+LG  D   +      
Sbjct: 267 YNYSLPGAKYGIEGVNGLKTGSSGYGAFNYIATYEKDQMKLVEVVLGVGDWYNQAGEMIR 326

Query: 259 ------LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
                 +L+    + + +  +     +F    ++   P 
Sbjct: 327 HTFGNAILNYVLEHFSFQTILPAGEHNFDGHKITTNQPL 365


>gi|238021454|ref|ZP_04601880.1| hypothetical protein GCWU000324_01354 [Kingella oralis ATCC 51147]
 gi|237868434|gb|EEP69440.1| hypothetical protein GCWU000324_01354 [Kingella oralis ATCC 51147]
          Length = 336

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 11/247 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                   K     +++  TG V+ +       + AS++KLM+A V+          +  
Sbjct: 87  AAQAGPMLKAQSALIMNAKTGQVLYQKNMSSVRSIASISKLMSAMVLLDA----HLDMNE 142

Query: 79  PITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ITI++        + S    G+T+T    L L ++ S N    A+A +       FV  
Sbjct: 143 QITITEAEIDRLKGTGSRLSVGTTLTRAQLLHLGLMSSENRAIHALARTYPGGMSAFVAA 202

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEI 195
           MN  +++LG++ + F    G+    + +TA ++  +           +       +    
Sbjct: 203 MNAKARSLGMANSRFYEPTGL-DPRNVSTALELGKMVQAASHYAKIRELTTSNYGQAYTS 261

Query: 196 KGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
            GK     N  V    G       KTG+   +G ++V  A  G   ++ V+LG+    +R
Sbjct: 262 NGKLQQYKNTNVLVREGLMNITLQKTGYIREAGRSMVLQAKMGQTPVVIVVLGSATSASR 321

Query: 253 NKVSASL 259
              + SL
Sbjct: 322 ASDARSL 328


>gi|167562012|ref|ZP_02354928.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           oklahomensis EO147]
          Length = 379

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++     +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 123 LLASCGYTGAARSLLRSRAIYVVDERTGTVLIEKNANRVVPIASVTKLMTSMVALDARAP 182

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L+ P+ +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 183 ----LSRPLRVSAQDRDYEKLTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYAGG 238

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+      T      +++   +    +       
Sbjct: 239 RPAFVAAMNRKARTLGMKHTHFVNATGLSPRNVSTAHDLSRLVAAASRYPRIKTFSTDTS 298

Query: 191 KGLEIKGKKYPNTNWA---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           K +     +    N               KTGF   +G  +V       + +  V+LGA 
Sbjct: 299 KTVFPGRGQLRYVNSDALVRAGDSNIMLQKTGFINEAGHCVVFRYAVRGRPVDIVLLGAP 358

Query: 248 DRNTRNKVSASLLSM 262
             +     +  +   
Sbjct: 359 GSSDHIADAMKIRRW 373


>gi|319949460|ref|ZP_08023520.1| putative penicillin-binding protein [Dietzia cinnamea P4]
 gi|319436886|gb|EFV91946.1| putative penicillin-binding protein [Dietzia cinnamea P4]
          Length = 342

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 103/299 (34%), Gaps = 38/299 (12%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                  +         + + D +TG ++A   P   + PASL K + A VV   L  + 
Sbjct: 29  VVAPNGFTTPRDVTASAWMISDLDTGEIVAARDPHGRYRPASLIKTLLATVVLDALDPEW 88

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
                      +      S      G   ++   L  L++ S ND AV +A       ++
Sbjct: 89  I----VHVTDADLEGAEGSLVGVGPGGAYSVKRLLSGLLMSSGNDAAVVLA-HQMGGIEQ 143

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------------- 180
            ++ MN  +  +G  +T+    +G+   G  +TA DM+++     T              
Sbjct: 144 TLEAMNTHAAAIGARSTYAATVNGLDGPGMMSTAYDMSLIFRDAMTRPAFAEIVATQSTG 203

Query: 181 -----------FPQYMHYFQIKGLEIKGKKYP--------NTNWAVGTFLGADGMKTGFT 221
                       P      Q  G  ++             N N  + ++ GA G KTGFT
Sbjct: 204 FPGYPAGEGAGPPDPAEAPQNTGPTLRPDGVTVNPGFVVGNDNQLLYSYPGAIGGKTGFT 263

Query: 222 CASGFNIVASAIQGDQSLIAVIL-GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD 279
             +    + +A +  + L  V+L G        + +ASLL   F        +    +D
Sbjct: 264 DDARHTYIGAAERDGRRLAVVLLDGTRVPAAPWQQAASLLDAAFATDGSVGSLGAGEQD 322


>gi|301384572|ref|ZP_07232990.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. tomato
           Max13]
          Length = 313

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 20  AFSTTALANESAVLNRDPSNLHLASGSAMVVDLQTDKVLYSSNPDVIVPIASVTKLMTAM 79

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +V    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 80  IVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 135

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 136 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLL 195

Query: 183 QYMHYFQIKGLEIKGKKY-----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y        +            KTGFT  +G  +V      ++
Sbjct: 196 SELSTTEQKTVTFRKPTYILGFSNTDHLVRKENWDIKLTKTGFTNQAGHCLVLLTSMANR 255

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 256 PVSVVILDAFGKYTHFADASRIRKW 280


>gi|74058494|gb|AAZ98837.1| VanYD [Enterococcus gallinarum]
          Length = 346

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 102/275 (37%), Gaps = 29/275 (10%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
               S      S++         +++ +T   + +        PAS  K++TA  V  + 
Sbjct: 73  TVFPSLDSAENSLSVNITAANAIVINADTNETLYQKKSTDKIAPASTAKMITALTVLDYC 132

Query: 70  KEKKAMLTTPITISKNASEYP--PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES- 126
                     + +           S +   +G T+T+   L  L++ S ND A  +A + 
Sbjct: 133 -----SPNDEMRVGAEIELMHDDSSRAWLMQGDTLTVRQLLVALMLPSGNDAAYTLAVNT 187

Query: 127 -----------LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
                        ++   F+  +N  +K+LG   ++F+   G    G YTTA D+A+++ 
Sbjct: 188 GKKIAGDNGLSNAQSIDVFMDKVNQKAKSLGAENSNFVVPDGYDADGQYTTAYDLAVIAK 247

Query: 176 RIKTDFPQYM----HYFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGF 226
               D         +    +    +   Y NTN      +        G+KTG +   G 
Sbjct: 248 ACLDDPYISEIVASYSSYERWPNGREVTYNNTNELLNPNSPYYRPEVIGLKTGTSSLGGA 307

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            IV++A+    + I  ++G+   N R +    ++ 
Sbjct: 308 CIVSAAVINGNTYICAVMGS-TENDRFQDGIDIID 341


>gi|290958940|ref|YP_003490122.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260648466|emb|CBG71577.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei
           87.22]
          Length = 282

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 116/279 (41%), Gaps = 24/279 (8%)

Query: 7   IIAMAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +IA  ++ +     ++A  T       +++  TG          P    S TK+MTA VV
Sbjct: 6   MIATGVVGSAPAQAAVAKPTLNAKGAFVINPATGRS-FGKTATTPRATGSTTKIMTAKVV 64

Query: 66  FSFLKEKKAMLTTPITI----SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
                +K   L   +T+    S    +   S++    G  +T+   L  L++ S  D A 
Sbjct: 65  L---SQKNLNLDAKVTVAGAYSDYIVKNDASSARLIVGDKVTVRQLLYGLMLPSGCDAAY 121

Query: 122 AIAESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
           A+A+       +  +       MN+T+K+LG++ T F +  G+    + ++ +D+  L+ 
Sbjct: 122 ALADKFGTGSTRAARVKSFIGKMNSTAKSLGMTNTKFDSFDGISNGTNQSSPKDLTTLAR 181

Query: 176 RIKTDFPQYMHYFQIKGLE--------IKGKKYPNTNWAV-GTFLGADGMKTGFTCASGF 226
            +  +         +   +         +   + NTN  +  T+ G  G+KTG    + +
Sbjct: 182 SVMKNSTFKTIVKTVTTKQKVTTKSGGYRYYTWENTNKPLLTTYNGTIGIKTGSGTEAKY 241

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +V +A +  +++   +L A   + R   +  LL+ GF 
Sbjct: 242 CLVFAATRNGKTIYGTVLTATSADARLADAKKLLNYGFA 280


>gi|237786122|ref|YP_002906827.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|237759034|gb|ACR18284.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 474

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 12/248 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            E   +  + + D ++G VIA   P   + PAS+ K++ A          +  L   +T 
Sbjct: 158 PERLTVGSWLIYDVDSGDVIAAKDPHGRYRPASIFKVLLAREAID-----RLPLDRVLTA 212

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           ++  +    S++        T+  AL+ L+++S ND A  +  +L   +K         +
Sbjct: 213 TQEDANMEGSHAGIGPDGKYTVRQALQGLLMRSGNDCAHLLMRALGGEKKVLADL-QKRA 271

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ-----IKGLEIKG 197
              G   T   +  G+   G  T+A D+A+L      +                  +  G
Sbjct: 272 DGSGTQDTRVTSYSGLDAPGLQTSAYDLALLYREAFHNKTFNEIVNTKLVDFPGYQDNPG 331

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVS 256
            +  N N  + T+ GA G KTGFT  +       A +  + L  + L A +   +    +
Sbjct: 332 FQISNDNEMLFTYEGAFGGKTGFTDDARHTYSGGAERNGRKLAVIELNATNAAGKGWDQA 391

Query: 257 ASLLSMGF 264
             LL   +
Sbjct: 392 TRLLDAAW 399


>gi|1586531|prf||2204232B penicillin-binding protein 4
          Length = 434

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHGVVQHGHYT--------------TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G       T              TARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQEATVSTARDYAILDLHVIKETPKILDFTKQLAPTTHAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|254482177|ref|ZP_05095418.1| D-alanyl-D-alanine carboxypeptidase superfamily protein [marine
           gamma proteobacterium HTCC2148]
 gi|214037502|gb|EEB78168.1| D-alanyl-D-alanine carboxypeptidase superfamily protein [marine
           gamma proteobacterium HTCC2148]
          Length = 278

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 103/264 (39%), Gaps = 11/264 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           ++   ++ F  L      K     +LD  +G++I     D     AS+TKLMTA VV   
Sbjct: 19  SVIAGTSKFTDLPGNPDLKSASAIVLD-ESGNLIYGKDVDTVRPIASITKLMTAMVVLDS 77

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGS-TMTLDNALKLLIVKSANDIAVAIAESL 127
                  L   +TI+K   +      +  +   T++    + L ++ S N  A A+  + 
Sbjct: 78  G----IGLDEKVTITKEDRDLVRLTGSRLEYGATLSRREMILLALMSSENRAATALGRTY 133

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS----WRIKTDFPQ 183
               + F+ HMN  ++ LG++ +HF +  G+ +    T A    +++    + + T+   
Sbjct: 134 PGGMENFLAHMNRKARALGMTNSHFADPAGLKKENVSTAADLAKMVTAAEEYALITEATT 193

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                           Y NTN  +       +  KTG+   +G  +V  A    + +  V
Sbjct: 194 TRRKDVYPYKGRGNLTYGNTNRLLKNASWDIELSKTGYINEAGRCLVMQANIEGEDVSIV 253

Query: 243 ILGALDRNTRNKVSASLLSMGFYN 266
           +L +  + T    S  L      N
Sbjct: 254 LLNSFGKLTPYGDSNRLRKWMLAN 277


>gi|154483607|ref|ZP_02026055.1| hypothetical protein EUBVEN_01311 [Eubacterium ventriosum ATCC
           27560]
 gi|149735517|gb|EDM51403.1| hypothetical protein EUBVEN_01311 [Eubacterium ventriosum ATCC
           27560]
          Length = 324

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 15/292 (5%)

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              AS TK+MT  V     K  +      I  S  A   P      KKG    L + L  
Sbjct: 1   MPMASTTKIMTCIVALESGKMNQI-----IKASSKAVSMPKVKMYAKKGEQYYLKDLLYA 55

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           ++++S ND A+ +AE +  ++++F + MN  +K +G   T+F+  +G+    HY+TA DM
Sbjct: 56  MMLESFNDAAMIVAEGIGGSQEEFAKMMNKKAKEIGAKNTNFVTPNGLDADNHYSTAYDM 115

Query: 171 -----AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
                     +   +      Y        +     N +  +     A G+KTGFT  +G
Sbjct: 116 ALIGAYATKNKQFNEITNTKSYSFTDVSAKRSITVNNKDMFLAMDNEAIGIKTGFTGKAG 175

Query: 226 FNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           +  V +     +  ++ +L      +++ + K + +L++ G     ++K I    K F  
Sbjct: 176 YCFVGAVKSNGRHFVSCVLACGWPPNKSYKWKDTTALMNHGKREYNEKKIIASGTK-FQI 234

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
           +  +     I+  V      +I+ +  +K   +  ++ +  +K  ++ N I 
Sbjct: 235 EIPNGTKKKINVGVSEGYTTLISEDDNVKSETN-FNYKLPIKKRDVVGNIII 285


>gi|260890742|ref|ZP_05902005.1| putative D-alanyl-D-alanine carboxypeptidase [Leptotrichia
           hofstadii F0254]
 gi|260859620|gb|EEX74120.1| putative D-alanyl-D-alanine carboxypeptidase [Leptotrichia
           hofstadii F0254]
          Length = 423

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 85/363 (23%), Positives = 154/363 (42%), Gaps = 28/363 (7%)

Query: 1   MRQFL--------VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ L        +I++MA L+      +  E        L+    G++I E+       
Sbjct: 12  MKKKLNIGRRSKKIIMSMAFLTVSALSFASGEDYYDYKSLLIGDINGNIIKEDNSSAVRP 71

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
            AS+TK+MT+ +    +K  +      +T+S  A+   P       G   T+ + LK  I
Sbjct: 72  LASVTKIMTSILTLDKIKNGQISYEDKVTVSAKAASV-PYGIKLTAGKQYTVRDLLKATI 130

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT-----A 167
           +KS+N+ A A+AE +      FV  MN  +++ GL++  + + HG+      +      A
Sbjct: 131 IKSSNNAAYALAEYVGGDVSNFVHSMNEKARSYGLNSLRYCSPHGLPPSYTGSCMDQGNA 190

Query: 168 RDMAILSWRIKTDFPQYMHY--FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           +D+  L+     D+ +Y+++   +   ++    K  +TN  +G  LG DG+KTG+  A+G
Sbjct: 191 KDLYKLAQITLKDYSEYLNFSKNKTDYVDNGNTKVTSTNALLGNVLGVDGIKTGYHDAAG 250

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY-----IIKDF 280
            NIV +A +G+  +IA+ILG+     RN + A  ++  + N   RK          I+  
Sbjct: 251 SNIVLTANRGNDRMIAIILGSNRAKDRNAIGAKEINDYYANGYARKASVKNNSLRPIEST 310

Query: 281 YQQNLSNEVPNISEEVCTTQ-------KEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
           Y  + +    N        Q       K   N   +  +  +K           +  N  
Sbjct: 311 YNTDNTETSKNSKGNSKVDQFFNMIFGKNHNNSAGKKMKIINKNDVVATATIGDVKYNLY 370

Query: 334 TKK 336
             K
Sbjct: 371 PTK 373


>gi|160892647|ref|ZP_02073437.1| hypothetical protein CLOL250_00177 [Clostridium sp. L2-50]
 gi|156865688|gb|EDO59119.1| hypothetical protein CLOL250_00177 [Clostridium sp. L2-50]
          Length = 323

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 18/261 (6%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            L+    + +    L++ +T   +  +       PAS+TKLMT  +V   +++    L  
Sbjct: 60  ALADENYSAVKSAVLINDSTKEALVVHNAHDRIYPASMTKLMTGLLVMESIEDGTLSLDD 119

Query: 79  PITISKNASEYPPS--NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            IT+S   +    +   S   KG ++T+ N L  L+++S ND  V +AE +  +E  FV+
Sbjct: 120 TITLSHTVTFQEDNVGVSDLTKGCSVTVKNLLYGLLIRSYNDCGVLLAEKIAGSEDAFVE 179

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHY 187
            MN  +  LG + THF+N HG+    HYTTA D+ ++          Y           Y
Sbjct: 180 KMNEKAFELGATNTHFVNCHGLHSDDHYTTAYDLYLIFSEFIKHDMAYLIDSLDSYDFTY 239

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGM-----KTGFTCASGFNIVASAIQG--DQSLI 240
               G E          +  G F   +G      K+G T A+G  ++   ++       +
Sbjct: 240 TDETGAEKSVTLQATNGYISGEFKFPEGYSLGSWKSGTTTAAGNCLILEFVKDDTGDKYV 299

Query: 241 AVILGALDRNTRNKVSASLLS 261
           AVI GA DR+T       L++
Sbjct: 300 AVIAGAEDRDTLYNDMTMLIN 320


>gi|291546150|emb|CBL19258.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. SR1/5]
          Length = 388

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 24/252 (9%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 LL+ +   V+      +   PAS+TK+MTA +   +       +   +TIS+  
Sbjct: 139 DSQSGVLLNLSDKKVLYAKGAYNKVYPASITKIMTAMLALKY-----GNMDDTVTISQEN 193

Query: 87  SEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                 +    F+ G  +T+D  L  L+V SAND A AIAE +  +  KFV+ MN+ +  
Sbjct: 194 VTLESGSQVAGFQAGDQVTMDQLLHCLLVYSANDAASAIAEHIGGSTDKFVEMMNSFAAE 253

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG------- 197
           LG + THF N HG+    HYTT  D+ ++      ++P++    Q+    +         
Sbjct: 254 LGCTGTHFTNPHGLQDENHYTTPYDIYLMLKEAL-NYPEFTDITQMASYTVSYKHSDGSD 312

Query: 198 --------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALD 248
                     Y     A    +   G KTG T  +G  +   +     +  I++++GA  
Sbjct: 313 ASATLPATDHYLTGEAATPKDVTILGGKTGTTDKAGNCLALLSQNAYGKPFISIVMGASS 372

Query: 249 RNTRNKVSASLL 260
           ++   +   SLL
Sbjct: 373 KDVLYQEMTSLL 384


>gi|330967602|gb|EGH67862.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 311

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  AFSTTALANESAVLNRDPSNLHLASGSAMVVDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +V    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  IVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLL 193

Query: 183 QYMHYFQIKGLEIKGKKY-----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y        +            KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKTVTFRKPTYILGFSNTDHLVRKENWDIKLTKTGFTNQAGHCLVLLTSMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|28869869|ref|NP_792488.1| penicillin-binding protein 7 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969996|ref|ZP_03398129.1| penicillin-binding protein 7 [Pseudomonas syringae pv. tomato T1]
 gi|302060754|ref|ZP_07252295.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. tomato
           K40]
 gi|302132778|ref|ZP_07258768.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|28853114|gb|AAO56183.1| penicillin-binding protein 7 [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213925321|gb|EEB58883.1| penicillin-binding protein 7 [Pseudomonas syringae pv. tomato T1]
          Length = 311

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  AFSTTALANESAVLNRDPSNLHLASGSAMVVDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +V    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  IVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLL 193

Query: 183 QYMHYFQIKGLEIKGKKY-----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y        +            KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKTVTFRKPTYILGFSNTDHLVRKENWDIKLTKTGFTNQAGHCLVLLTSMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|262183779|ref|ZP_06043200.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 406

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 102/275 (37%), Gaps = 23/275 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + + D +TG +IA   P+  + PAS+ K + A VV          L   IT + 
Sbjct: 87  DVVASAWMVSDLDTGEIIAMKDPNGRYRPASIIKALLALVVIEE-----LPLDQRITATL 141

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           + +    S          T++  L+ L++ S ND A A+A+++   E+   + +N  ++ 
Sbjct: 142 DDASVEGSAVGLGPDGVYTVEQLLQGLLMASGNDAAHALAQAVGGDEEAL-EKVNAKAQE 200

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKK 199
           +G  +T   +  G+   G  T+A D++++      +                  E+ G +
Sbjct: 201 IGTRSTVAASYSGLDAAGMSTSAADISLIYRAAFANDTFARIVDTEHVDFPGWGEMPGYE 260

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N          G KTG+T  +    V +  +  + L AV+L               
Sbjct: 261 LWNDNGLFLNDPDGIGGKTGYTEDAHHTFVGAINRDGRRLQAVLLDTT------------ 308

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           +  GF      + +     D    +    V + + 
Sbjct: 309 VEHGFRAWEQAQMLLDEASDVRPGDGVGLVDDFAA 343


>gi|227832361|ref|YP_002834068.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227453377|gb|ACP32130.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 613

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/275 (19%), Positives = 102/275 (37%), Gaps = 23/275 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + + D +TG +IA   P+  + PAS+ K + A VV          L   IT + 
Sbjct: 294 DVVASAWMVSDLDTGEIIAMKDPNGRYRPASIIKALLALVVIEE-----LPLDQRITATL 348

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           + +    S          T++  L+ L++ S ND A A+A+++   E+   + +N  ++ 
Sbjct: 349 DDASVEGSAVGLGPDGVYTVEQLLQGLLMASGNDAAHALAQAVGGDEEAL-EKVNAKAQE 407

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKK 199
           +G  +T   +  G+   G  T+A D++++      +                  E+ G +
Sbjct: 408 IGTRSTVAASYSGLDAAGMSTSAADISLIYRAAFANDTFARIVDTEHVDFPGWGEMPGYE 467

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N          G KTG+T  +    V +  +  + L AV+L               
Sbjct: 468 LWNDNGLFLNDPDGIGGKTGYTEDAHHTFVGAINRDGRRLQAVLLDTT------------ 515

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           +  GF      + +     D    +    V + + 
Sbjct: 516 VEHGFRAWEQAQMLLDEASDVRPGDGVGLVDDFAA 550


>gi|229135841|ref|ZP_04264610.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228647630|gb|EEL03696.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
          Length = 301

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 106/269 (39%), Gaps = 12/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           F  +I  +         +        Y   +D +TG ++          PAS+ K+MT  
Sbjct: 37  FTGMIFFSYAQRQQVVRADQPNITGQYGITIDADTGEILYGKREGERSYPASIGKMMTTL 96

Query: 64  VVFSFLKEKKAMLTTPITISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           ++   +KE        IT+++NA +          + G  +  D ALKL+++ SA+ IA 
Sbjct: 97  LLLENVKE-----DEEITVTENAIKTESQSKKIKLRAGEKLKRDEALKLMLIISADPIAE 151

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           +IAE +  ++ +FV+ MN  +K LG     F NA G    G+  +  D+AI++       
Sbjct: 152 SIAEHIAGSKNEFVKMMNARAKELGTKHATFKNASGADALGNKVSPYDIAIITKESLKYP 211

Query: 182 PQYMHYFQIK---GLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
               +   I        +  K  N           A G K+G +    + +V    +  +
Sbjct: 212 IVLEYMNSIHTTLHTSERSPKIANYGREELYDDPYAIGSKSGLSALGKYTVVTVDEKDGK 271

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L +  R      +  +    F  
Sbjct: 272 RVINVVL-SSTRTQLYPDTKKMSHYAFQQ 299


>gi|253579420|ref|ZP_04856690.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849518|gb|EES77478.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 306

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 97/236 (41%), Gaps = 11/236 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
              P   L+    G ++ E   +    PAS+TK+MT  +      +    +T    +   
Sbjct: 41  INSPNAILMQARGGKILGEINGEAQIYPASMTKIMTVILGIENFDDLDEKITLTNEMFSG 100

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             E   + + F+ G  + + + L   ++ S  +  +A+A+++  +E  F + MN  ++ L
Sbjct: 101 LYEQDATQAGFQPGEEVRVIDLLYGAMLPSGAECCIALADTISGSEADFAELMNKKARKL 160

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE------IKGKK 199
           G+  THF ++ G+    HY+T +D+A+L      +          +           G  
Sbjct: 161 GMENTHFCDSTGLHNPDHYSTVKDIAVLMKYCIKNDTFREIVETSRHSTGVTNIHPDGIT 220

Query: 200 YPNTNWAVGTFLGAD-----GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
           Y +T +   +          G KTG+T  +G  +V+ A    +  I V  GA   +
Sbjct: 221 YYSTMFKNLSDPTVTGGKILGGKTGYTSEAGHCLVSFAEIEGREYIFVSAGASGAD 276


>gi|313897406|ref|ZP_07830949.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           HGF2]
 gi|312957776|gb|EFR39401.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp.
           HGF2]
          Length = 327

 Score =  109 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 62/289 (21%), Positives = 114/289 (39%), Gaps = 19/289 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           +     Y +L      ++ E   D   + AS++K+MTA +     +     L     +  
Sbjct: 17  SVHAESYVVLSGADNTIVEEKNKDEKQSVASISKIMTAVIAIEHGQ-----LDESFAVDD 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             ++   S+   K+G  +T+ + L  L+++S ND AV IA+ +  +++ FV+ MN+ +  
Sbjct: 72  EINKAYGSSVYLKQGQQVTMRDLLYGLMLRSGNDAAVEIAKHVAGSQEAFVELMNHKAAE 131

Query: 145 LGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           +G+S T F N  G+     G+ +TA DMA+L      +                  ++ N
Sbjct: 132 IGMSNTTFSNPSGLDEEDGGNISTANDMAVLMSYAMKNKEFRTITGSKYYTTDWNMRWKN 191

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +  +    G KTGFT  +G  +V++A       I V L       R          
Sbjct: 192 KNRLLFDYPFTVGGKTGFTKKAGRTLVSAAEHDGVESIVVTL-------REGD-----DF 239

Query: 263 GFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
            F+ +   +    +      +     V      V  T K  ++ +   K
Sbjct: 240 AFHEQKHTEVFQKMDVVTIMRKGDYTVNGRKFHVPETLKVTLHKDGSDK 288


>gi|288941902|ref|YP_003444142.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Allochromatium
           vinosum DSM 180]
 gi|288897274|gb|ADC63110.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Allochromatium
           vinosum DSM 180]
          Length = 353

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 13/249 (5%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            A         ++D   G+V+           AS+TKLMTA VV          L TPI 
Sbjct: 99  AALNLHSVSAMIVD-ERGNVLYSKNARAVRPIASITKLMTAMVVLDTG----VSLKTPIR 153

Query: 82  ISKNASEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHM 138
           I ++  +      +      + ++    + + I+ S N  A A+  +  +    +F+Q M
Sbjct: 154 IVEDDRDRLKNSRSRLRINDTVLSRREMIMVAIMSSDNRAAHALGRTTFRGGTPEFIQAM 213

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLE 194
           N  ++ LG+  T F+++ G+      T    + ++    ++ +  +             +
Sbjct: 214 NRKARALGMRNTRFVDSSGLDPRNQSTAEDLVKMVRAASNYPLLHEITALGQMTLRPFSD 273

Query: 195 IKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
               +Y NTN  V +     +  KTGF   +G  +V  A   ++SL  V LG+  + +  
Sbjct: 274 GTALQYRNTNPLVRSPEWTVEVSKTGFINEAGRCLVMRARIDNRSLYMVFLGSNGKLSTV 333

Query: 254 KVSASLLSM 262
             S  +   
Sbjct: 334 GDSNRVRDW 342


>gi|157833819|pdb|1SKF|A Chain A, Crystal Structure Of The Streptomyces K15
           Dd-Transpeptidase
          Length = 262

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S TK+MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ S  D A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +     R   +  +++ GF 
Sbjct: 240 LASTSIPARESDATKIMNYGFA 261


>gi|170691174|ref|ZP_02882340.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           graminis C4D1M]
 gi|170144423|gb|EDT12585.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           graminis C4D1M]
          Length = 410

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 10/243 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     ++D  T  V+ E   D     AS++KLMTA V         A L   +   ++
Sbjct: 167 LRARSVFVVDERTQTVLTEKQADRVMPIASVSKLMTAVVALDTRHALDAPLNVTV---QD 223

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 + S    GS ++  + L + ++ S N  A A++         FV  MN  ++ L
Sbjct: 224 QDFDKFTGSRLSVGSVLSRHDMLHIALMSSENRAAAALSRDYAGGRPGFVAAMNAKARAL 283

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           G+  T F+N  G+    + +TARD+A L      + +   +      +   G       Y
Sbjct: 284 GMRHTSFVNGTGL-SPHNVSTARDLARLVAAASRYPLIRAYSTDRDQWVFPGGPRARLSY 342

Query: 201 PNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            N+N  V +        KTGF   +G  +V   I   + +  V+LGA   +        +
Sbjct: 343 HNSNALVRSGDRSIVLQKTGFINEAGHCVVVRMIVHGRPIDIVVLGAPGPHDHIADVIRI 402

Query: 260 LSM 262
              
Sbjct: 403 RRW 405


>gi|160938825|ref|ZP_02086176.1| hypothetical protein CLOBOL_03719 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437788|gb|EDP15548.1| hypothetical protein CLOBOL_03719 [Clostridium bolteae ATCC
           BAA-613]
          Length = 325

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 98/253 (38%), Gaps = 22/253 (8%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L D +    +          PAS+TK+MTA V           L   + ++ +
Sbjct: 74  VTSEAAALFDVSDRETLYSKEAFERLYPASITKVMTALVAIKN-----GDLNARVVVTDD 128

Query: 86  ASEYP--PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           A       +    + G T+TL+  L  L++ S ND   AIA  +  +  KF   MN  + 
Sbjct: 129 AVITESGATLCGIEPGDTLTLEQLLYGLMLPSGNDAGAAIAVHIAGSIDKFADMMNQEAA 188

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--------------FPQYMHYFQ 189
           +LG + THF+N HG+    HYTTA D+ ++                              
Sbjct: 189 SLGATGTHFVNPHGLNDPDHYTTAYDLYLIFNEALKYPVFRQIVGTTSYTANYHDKDSQA 248

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI-VASAIQGDQSLIAVILGALD 248
           +      G  +          L   G KTG T A+G+ + +A+  Q D+  I+V+L +  
Sbjct: 249 VTKTWKGGNWFMTRERETPEGLTVFGGKTGTTNAAGYCLIMATRDQNDKEYISVVLKSDS 308

Query: 249 RNTRNKVSASLLS 261
           R        +++S
Sbjct: 309 RPGLYDNMTNIIS 321


>gi|1262137|emb|CAA62899.1| penicillin-binding protein 4 [Staphylococcus aureus]
          Length = 431

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 28/280 (10%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----S 92
            TG ++ +   D  WNPAS+TKLMT Y+    + + +  L   +T++            S
Sbjct: 57  QTGQLLYQYNIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVTMTNKEYIMSTLPELS 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           N+    G   T+ + L++ +  S+N  A+ +A+ + K    FV  MNN +K +G+  THF
Sbjct: 117 NTKLYPGQVWTIADLLQITVSNSSNAAALILAKKVSKNTSDFVDLMNNKAKAIGMKNTHF 176

Query: 153 MNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           +N  G                Q    TTARD AIL   +  + P+ + + +         
Sbjct: 177 VNPTGAENSRLRTFAPTKYKDQERTVTTARDYAILDLHVIKETPKILDFTKQLAPTTLAV 236

Query: 199 KYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD------ 248
            Y   N++      +  G DG+KTG +  + +N   +  +G   +  VI+GA D      
Sbjct: 237 TYYTFNFSLEGAKMSLPGTDGLKTGSSDTANYNHTITTKRGKFRINQVIMGAGDYKNLGG 296

Query: 249 RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
              RN +  +L+   F      K ++   +    +    E
Sbjct: 297 EKQRNMMGNALMERSFDQYKYVKILSKGEQRINGKKYYVE 336


>gi|227505356|ref|ZP_03935405.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium striatum ATCC
           6940]
 gi|227198058|gb|EEI78106.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium striatum ATCC
           6940]
          Length = 419

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 101/301 (33%), Gaps = 23/301 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + + D +TG +IA   P+  + PAS+ K + A VV          L   +  + 
Sbjct: 103 DVVASAWMVSDIDTGEIIAMKDPNGRYRPASIIKALLALVVIDE-----VPLDKKVKATM 157

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +    S          T++  L+ L++ S ND A A+A  L   E+   + +N  +K 
Sbjct: 158 KDASIEGSAVGIGPDGEYTVEQLLQGLLMASGNDAAHALAGQLGGDEEA-SKKVNALAKK 216

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKK 199
           LG  +T   +  G+   G  T+A D++I+      +                  E+ G +
Sbjct: 217 LGTRSTRAASYSGLDSAGMSTSAEDISIIYRAAFRNKTFARIVDTEHVEFPGWGELPGYE 276

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             N N          G KTG+T  +    V +  +G + L AVIL               
Sbjct: 277 LWNDNGLFLNDPDGIGGKTGYTEDAHHTFVGALDRGGRRLQAVILDTT------------ 324

Query: 260 LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           +  GF      + +               + + +     T             +    +H
Sbjct: 325 VEHGFRAWQQAQMLLDEAYKVKPGEGVGTLSDAAAPTSNTSTATKTKEPAPTTSPSASAH 384

Query: 320 F 320
            
Sbjct: 385 K 385


>gi|71906306|ref|YP_283893.1| murein-DD-endopeptidase [Dechloromonas aromatica RCB]
 gi|71845927|gb|AAZ45423.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Dechloromonas aromatica RCB]
          Length = 359

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 8/241 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK- 84
                  ++D +TG  + E  PD     AS++KLMTA VV       K  L   +TI   
Sbjct: 109 LYSASALVIDQSTGQAMLEKQPDLVVPIASISKLMTAMVVLDA----KLDLQEVVTIGDA 164

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +      + S    G+TMT + A+ L ++ S N  A ++          FVQ MN  ++ 
Sbjct: 165 DVDGLKGTRSRLPVGTTMTREAAMLLALMSSENRAAHSLGRHYPGGLPAFVQAMNKKAQA 224

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK--GKKYPN 202
           LG+  + F    G+  +   T      +++   +    +         +E+    + + N
Sbjct: 225 LGMYNSRFEEPTGLSSNNVSTAHDLARMVAAAARYPEIRQYSTTAEAKVELNGRIRDFHN 284

Query: 203 TNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           TN  V       G  KTG+   +G  +V  A   D+ ++ V+L +  + TR   +  +  
Sbjct: 285 TNALVRNDNWEIGVSKTGYISEAGRCLVMQARVADKPVVIVLLDSNGKMTRVGDANRIKR 344

Query: 262 M 262
            
Sbjct: 345 W 345


>gi|7766851|pdb|1ES2|A Chain A, S96a Mutant Of Streptomyces K15 Dd-Transpeptidase
          Length = 262

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S TK+MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ +  D A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPAGCDAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +     R   +  +++ GF 
Sbjct: 240 LASTSIPARESDATKIMNYGFA 261


>gi|7766854|pdb|1ES5|A Chain A, S216a Mutant Of Streptomyces K15 Dd-Transpeptidase
          Length = 262

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S TK+MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ S  D A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGAGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +     R   +  +++ GF 
Sbjct: 240 LASTSIPARESDATKIMNYGFA 261


>gi|167760670|ref|ZP_02432797.1| hypothetical protein CLOSCI_03055 [Clostridium scindens ATCC 35704]
 gi|167661557|gb|EDS05687.1| hypothetical protein CLOSCI_03055 [Clostridium scindens ATCC 35704]
          Length = 324

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 11/239 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E    PY  L D ++G+ +AE+       PASLTK+MTA +     ++ + ++T P    
Sbjct: 46  ENLYSPYSILTDLDSGNALAEHNAQDRIYPASLTKIMTAILAIENTQDMEEVITLPTDFF 105

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                   S + F+ G  + L + L  +++ S  +  +A  E +  +E+ FV+ MN  + 
Sbjct: 106 SKLYIENASMAGFQPGEQVRLKDLLYGMLLPSGAECCLAFCERIAGSEEAFVRLMNKKAG 165

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            LGL  THF N+ G+    HY+T +D++ L      +      +   +   +  +++P  
Sbjct: 166 ELGLENTHFCNSTGLHDSEHYSTVKDISALLQYALKNETFRAAFTSSQYSTLPSEQHPKG 225

Query: 204 N-WAVGTFLGADGMK----------TGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
             +    F   +  K          TG+T  +G  + + A    + +I V   A   + 
Sbjct: 226 FTFYSTMFECMESTKFTGGKIIGGKTGYTKEAGLCLASLAEINGKEVILVTANADGTHQ 284


>gi|268610245|ref|ZP_06143972.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus flavefaciens
           FD-1]
          Length = 471

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 130/377 (34%), Gaps = 42/377 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK--------LPYYTLLDTNTGHVIAENYPDHPWN 52
           M++    IA  +++  F     AE                +++ +   VI E   D    
Sbjct: 1   MKKLFAAIASVVMAVPFISAPKAEAISFPLKNQIQSESAIVINMDVDTVIHEKNADTKQM 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNAL 108
           P  L  +M A V         A +T   ++ +  +E    +            +T+ + L
Sbjct: 61  PGPLVNIMAAVVCLENCPNINAEVTVHSSVYEYLNETEYKDDLRWADIYDEDVLTVTDLL 120

Query: 109 KLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             +++ S+ + +  +A  +       F++ MN+ ++ +GL  THF NA G+     YTTA
Sbjct: 121 YAMMLTSSMEASETLAYYVGDGNTDNFIKMMNDKAEEIGLENTHFTNATGMYDTAQYTTA 180

Query: 168 RDMAILSWRIK----------TDFPQYMHYFQIKGLEIKGKKYPNTNWAV-----GTFLG 212
           RDMA L+              T           +    +   + ++N  +       + G
Sbjct: 181 RDMAKLTQYALTVPLFETIATTFQYNPSIPNPDRHKSHEEWIWTHSNGMMDPSSGDYYSG 240

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-------RNKVSASLLSMGFY 265
             G+KT     +G NI+A A +     +AV+L A   +              ++    F 
Sbjct: 241 MKGIKTANLEMAGRNIIAMASRDGNKYLAVLLKAPLNDADGNPAFYHFSDCMNVFDWAFK 300

Query: 266 NKTDRKKINYIIKDFYQ-----QNLSNEVPNISEEVCTTQKEIINYNT--QMKEAKDKES 318
           + + +  +    +               +    +E+     + ++ +T  + K    K S
Sbjct: 301 HFSYQTVLANTAEVGELPVKLADGNDYVLARPKDEISLLWYDEVDTSTISKDKIEWYKNS 360

Query: 319 HFIDFEKITLLKNKITK 335
                 K   L     +
Sbjct: 361 LQAPVTKDEPLGKVTLE 377


>gi|307726448|ref|YP_003909661.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1003]
 gi|307586973|gb|ADN60370.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1003]
          Length = 415

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 90/243 (37%), Gaps = 10/243 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     ++D  T  V+ E   D     AS++KLMTA V         A L   +   ++
Sbjct: 171 LRARSVFVIDERTQTVLTEKQADTVMPIASISKLMTAVVSLDAKHALDAPLNVTV---QD 227

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 + S    GS +   + L + ++ S N  A A++         FV  MN  ++ L
Sbjct: 228 QDFDKFTGSRLSVGSVLPRHDMLHIALMSSENRAAAALSRDYAGGRPGFVAAMNAKARAL 287

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           G+  T F+N  G+    + +TARD+A L      + +   +          G       Y
Sbjct: 288 GMRHTRFVNGTGL-SPHNVSTARDLARLVAAASRYPLIRAYSTDRAQLVFPGGRRASLSY 346

Query: 201 PNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            N+N    G        KTGF   +G  +V   +   + +  V+LGA            +
Sbjct: 347 HNSNALVRGGDRSIVLQKTGFINEAGHCVVVRMMVHGRPIDIVVLGAPGPRDHLADVIRI 406

Query: 260 LSM 262
              
Sbjct: 407 RRW 409


>gi|237738804|ref|ZP_04569285.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 2_1_31]
 gi|229423907|gb|EEO38954.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 2_1_31]
          Length = 419

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 10/240 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + D N G+VI     D  +  AS+TK+MT  V F  +      L   + ISK   +
Sbjct: 165 RAVLVGDLN-GNVIFSKNADTMYPLASVTKVMTLLVTFDEINAGNISLNDSVRISKTPLK 223

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLG- 146
           Y  S    K+G    L++ +K   V SAN+   AIAE + + +   FV  MN   K LG 
Sbjct: 224 YGGSGIALKEGQIFVLEDLIKASAVYSANNATYAIAEYVGEGSVFNFVAKMNKKLKQLGL 283

Query: 147 LSATHFMNAHGVVQHGHYTTARD------MAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +   +    G+          +        +    +K      +   +   +       
Sbjct: 284 QNDIKYHTPAGLPTRNTKMPMDEGTPRGIYKLSIEALKYHKYIEIAGIKNTKIYNGKISI 343

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  +       LI V++G     TR+ +  +++
Sbjct: 344 RNRNHLIGE-DGVYGIKTGFHKEAKYNITVAVKFEGIDLIIVVMGGETYKTRDDLVRTII 402


>gi|217424602|ref|ZP_03456100.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|237508406|ref|ZP_04521121.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|217392526|gb|EEC32550.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|235000611|gb|EEP50035.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 373

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 113 ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 168

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 169 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 228

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 229 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 287

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 288 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 347

Query: 255 VSASL 259
            +A L
Sbjct: 348 DAARL 352


>gi|167921747|ref|ZP_02508838.1| family S11 unassigned peptidase [Burkholderia pseudomallei BCC215]
          Length = 350

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 90  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 145

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 146 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 206 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 264

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 265 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 324

Query: 255 VSASL 259
            +A L
Sbjct: 325 DAARL 329


>gi|167913835|ref|ZP_02500926.1| family S11 unassigned peptidase [Burkholderia pseudomallei 112]
          Length = 493

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 102 ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 157

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 158 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 217

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 218 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 276

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 277 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 336

Query: 255 VSASL 259
            +A L
Sbjct: 337 DAARL 341


>gi|167905525|ref|ZP_02492730.1| family S11 unassigned peptidase [Burkholderia pseudomallei NCTC
           13177]
          Length = 365

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 105 ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 160

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 161 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 220

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 221 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 279

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 280 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 339

Query: 255 VSASL 259
            +A L
Sbjct: 340 DAARL 344


>gi|167725751|ref|ZP_02408987.1| family S11 unassigned peptidase [Burkholderia pseudomallei DM98]
          Length = 281

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 21  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 76

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 77  IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 136

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 137 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 195

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 196 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 255

Query: 255 VSASL 259
            +A L
Sbjct: 256 DAARL 260


>gi|167827077|ref|ZP_02458548.1| family S11 unassigned peptidase [Burkholderia pseudomallei 9]
 gi|167897149|ref|ZP_02484551.1| family S11 unassigned peptidase [Burkholderia pseudomallei 7894]
          Length = 349

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 89  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 144

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 145 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 204

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 205 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 263

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 264 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 323

Query: 255 VSASL 259
            +A L
Sbjct: 324 DAARL 328


>gi|254296746|ref|ZP_04964200.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 406e]
 gi|157806643|gb|EDO83813.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 406e]
          Length = 350

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 90  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 145

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 146 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 206 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 264

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 265 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 324

Query: 255 VSASL 259
            +A L
Sbjct: 325 DAARL 329


>gi|134283054|ref|ZP_01769756.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|226196446|ref|ZP_03792027.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254198846|ref|ZP_04905264.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei S13]
 gi|254263948|ref|ZP_04954813.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
 gi|134245702|gb|EBA45794.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|169657018|gb|EDS88412.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei S13]
 gi|225931322|gb|EEH27328.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254214950|gb|EET04335.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 373

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 113 ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 168

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 169 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 228

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 229 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 287

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 288 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 347

Query: 255 VSASL 259
            +A L
Sbjct: 348 DAARL 352


>gi|53721488|ref|YP_110473.1| peptidase [Burkholderia pseudomallei K96243]
 gi|76819779|ref|YP_337155.1| peptidase [Burkholderia pseudomallei 1710b]
 gi|52211902|emb|CAH37907.1| family S11 unassigned peptidase [Burkholderia pseudomallei K96243]
 gi|76584252|gb|ABA53726.1| family S11 unassigned peptidase [Burkholderia pseudomallei 1710b]
          Length = 362

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 102 ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 157

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 158 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 217

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 218 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 276

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 277 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 336

Query: 255 VSASL 259
            +A L
Sbjct: 337 DAARL 341


>gi|167741512|ref|ZP_02414286.1| family S11 unassigned peptidase [Burkholderia pseudomallei 14]
 gi|167818703|ref|ZP_02450383.1| family S11 unassigned peptidase [Burkholderia pseudomallei 91]
          Length = 349

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 89  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 144

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 145 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 204

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 205 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 263

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 264 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 323

Query: 255 VSASL 259
            +A L
Sbjct: 324 DAARL 328


>gi|126445342|ref|YP_001061703.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 668]
 gi|126224833|gb|ABN88338.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           668]
          Length = 350

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 90  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 145

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 146 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 206 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 264

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 265 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 324

Query: 255 VSASL 259
            +A L
Sbjct: 325 DAARL 329


>gi|254185373|ref|ZP_04891961.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1655]
 gi|254187257|ref|ZP_04893771.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157934939|gb|EDO90609.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184209608|gb|EDU06651.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1655]
          Length = 350

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 90  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 145

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 146 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 206 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 264

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 265 RTLYYHSTNVLLRDNAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 324

Query: 255 VSASL 259
            +A L
Sbjct: 325 DAARL 329


>gi|187477411|ref|YP_785435.1| D-alanyl-D-alanine carboxypeptidase [Bordetella avium 197N]
 gi|115421997|emb|CAJ48519.1| probable D-alanyl-D-alanine carboxypeptidase [Bordetella avium
           197N]
          Length = 409

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 6/237 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     + D  T  V+     +     AS++KLMTA VV    +    +L       ++
Sbjct: 165 LRSSTAYVQDLTTSTVLFAKNENVVRPIASISKLMTALVVVDANQPMNEILEVTD---ED 221

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 + S  + G+ ++  + L L ++ S N  A A+  +     + FV  MN  +++L
Sbjct: 222 IDTLKHTTSRLRVGTRLSRGDMLHLALMSSENRAAHALGRNYPGGLEAFVAAMNAKARSL 281

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PNT 203
           G+  T F+   G+      +      +L    +              +EI  +     NT
Sbjct: 282 GMINTRFVEPTGLSSENVSSPHDLARLLRAASQRPLIHRYSTDTEYDVEINKRTQTFRNT 341

Query: 204 NWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
           N  V          KTGF   +G  +V  A    + +  V+L +  + +R   +  +
Sbjct: 342 NLLVRKPDWDIKVSKTGFINEAGECLVMLARINGRDMAIVLLDSQGKLSRIGDAMRI 398


>gi|116629129|ref|YP_814301.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus gasseri ATCC
           33323]
 gi|282851112|ref|ZP_06260486.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus gasseri
           224-1]
 gi|116094711|gb|ABJ59863.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus gasseri ATCC
           33323]
 gi|282558064|gb|EFB63652.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus gasseri
           224-1]
          Length = 308

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 35/299 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           + FL II + +++  F                 +      +     +D   G+VI     
Sbjct: 10  KNFLWIIGIVVIAVCFLLWKNNFGPNSMPSNYHANQVDLNVKSAVAIDAKNGNVIYAKNA 69

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           +     AS+TKL+T Y+    +KEKK    T ++ ++           ++     G   T
Sbjct: 70  NQSLPIASMTKLLTTYLTLKAIKEKKIFWDTTVSPTQEIINLGSNPDYASVPLNLGQKYT 129

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH-- 161
           +       ++KSAN+ A  +A ++   E  F+  M   +    L    F+   G+ +   
Sbjct: 130 VKELYDAALIKSANNAARMLAIAVSGNETNFLNQMRQQANKWKLHNVKFVTVDGLPEKKK 189

Query: 162 ---------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA------ 206
                     +  +A DMAI++ ++ TD+P+ ++  ++     +     N+N        
Sbjct: 190 NFLGMTTTIENKMSANDMAIIARKLVTDYPEVLNTTKVAKTYFRNTLMTNSNKMLNGLSD 249

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
                  DG+KTG T  +G     +  + ++ +I VILGA + N R   +  LL+  F 
Sbjct: 250 YDPNYPVDGLKTGTTDGAGSCFTCTVDKNNKRVITVILGAQNDNERFSETKKLLNYSFN 308


>gi|223985877|ref|ZP_03635915.1| hypothetical protein HOLDEFILI_03221 [Holdemania filiformis DSM
           12042]
 gi|223962143|gb|EEF66617.1| hypothetical protein HOLDEFILI_03221 [Holdemania filiformis DSM
           12042]
          Length = 335

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 73/329 (22%), Positives = 128/329 (38%), Gaps = 33/329 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  V      L            +    Y ++  N G+V+         + AS++K+M
Sbjct: 1   MKKIAVFFLTLTLFW-------TPLHADGSYIVISGNDGNVLEAENEHEVRSIASISKIM 53

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V                 I    +    S    +KG  +++ + L  +++KS ND A
Sbjct: 54  TAVVALENGDYI-----DQWIIGDEVTNVTGSMIWIQKGQQVSMRSLLYGMMLKSGNDAA 108

Query: 121 VAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRI 177
           VAIA  +   + +KF+Q MN  +  LG+  T F N +G+   + G+Y+TA DMA+L    
Sbjct: 109 VAIAHRVGGGSVEKFIQMMNEKAVALGMKDTEFHNPNGMDVEEEGNYSTAYDMAVLMQY- 167

Query: 178 KTDFPQYMHYFQIKGLEIKG-KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
               PQ+      +    +   ++ N+N  +  F    G KTGFT  +G  +V +A  G+
Sbjct: 168 AMTLPQFREIVATQYYTSEWGSRWKNSNKLLSNFEFCTGGKTGFTNKAGETLVTAAQNGE 227

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPNI 292
              I V L   DR              F+ +  RK +       ++          +  +
Sbjct: 228 LEYIVVTLAVPDR------------WTFHEQKYRKAMEMCELITLQPAGPIEQEGYIAQL 275

Query: 293 SEEVCTTQKEIINYNTQMKEAKDKESHFI 321
            +      K+      Q     +K  + +
Sbjct: 276 DKPFEVVVKKEEAGQGQYTMTLNKSKNEL 304


>gi|187921395|ref|YP_001890427.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           phytofirmans PsJN]
 gi|187719833|gb|ACD21056.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           phytofirmans PsJN]
          Length = 410

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 10/243 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            +     ++D  T  V+AE   D     AS++KLMTA V         A L   +   ++
Sbjct: 166 LRARSVYVVDERTQTVLAEKQADRVMPIASVSKLMTAVVALDAKHALNAPLNVTV---QD 222

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 + S    GST++  + L + ++ S N  A A++         FV  MN  ++ L
Sbjct: 223 QDFDKFTGSRLSVGSTLSRHDMLHIALMSSENRAAAALSRDYTGGRPGFVAAMNAKARLL 282

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           G+  T F+N  G+    + +TARD+++L      + +   +        + G       Y
Sbjct: 283 GMRHTSFVNGTGL-SAQNVSTARDLSLLVAAASRYPLIRAYSTDRDQVVLPGGGRASLSY 341

Query: 201 PNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            N+N    G        KTGF   +G  +V       + +  V+LGA   +      A +
Sbjct: 342 HNSNALVRGGDRSIVLQKTGFINEAGHCVVVRMKVHGRPVDIVVLGAPGAHDHIADVARI 401

Query: 260 LSM 262
              
Sbjct: 402 SRW 404


>gi|222159812|gb|ACM47285.1| D,D-carboxypeptidase VanYD [Enterococcus faecium]
          Length = 363

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 103/260 (39%), Gaps = 29/260 (11%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +++ +T  V+ +        PAS  K++TA  V  +           + +  
Sbjct: 105 NIIAANAIVVNKDTDAVLYQKNGTDRIAPASTAKMITALTVLEYC-----SPEEEMRVGA 159

Query: 85  NASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK--------- 133
                   +S     KG T+T+   L  L++ S ND A  +A +  KT            
Sbjct: 160 EIEMIHSDSSTAWLMKGDTLTVRQLLIALMLPSGNDAAYTLAVNTGKTIAGDNSLSNQQA 219

Query: 134 ---FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----H 186
              F+  +N  ++ LG++ ++F+   G    G YTTA D+AI++     +         +
Sbjct: 220 IKIFMDKVNEKARELGVTDSNFVVPDGYDAEGQYTTAYDLAIIAKACLENPIISEIVASN 279

Query: 187 YFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               K    +   Y N+N      +        G+KTG +   G  +V++A+   ++ I 
Sbjct: 280 TSYEKWPNGREVTYNNSNELLDPNSPYYRPEVIGLKTGTSSLGGACVVSAAVIDGETYIC 339

Query: 242 VILGALDRNTRNKVSASLLS 261
           V +G+  + +R + S  +L 
Sbjct: 340 VAMGS-TKESRFQDSVDILD 358


>gi|194467015|ref|ZP_03073002.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           100-23]
 gi|194454051|gb|EDX42948.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           100-23]
          Length = 417

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 122/374 (32%), Gaps = 42/374 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLS------IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +  LV+  +++  N     +       A          +D  +G V+ +      +  AS
Sbjct: 13  KLLLVMAVISICLNGLGMFAKVHADNAAFQMDARAAYAIDAESGQVLYQKNATKRYPIAS 72

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLL 111
           + K++T  V+   ++         I I+   ++                  T+   +  +
Sbjct: 73  VIKILTLGVILQDIRNHHLKWDQKIKITPAVAKMADDWHFSNVPLVNGEEYTVRQLVDSM 132

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV------------ 159
           ++ SA+    A+A +   +   F + M   +K  G++     N  G+             
Sbjct: 133 MLVSADGSTEALALADAGSTAAFNKKMMAFAKKAGVTDIKIYNMIGLPNGDLGEHKLKGV 192

Query: 160 --QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNTNW------A 206
                +  +A+D+A++S  +   +P+ +   + K       K       N N        
Sbjct: 193 DKDAENLLSAKDVALISKYLVEQYPETLDITKQKFANFDVTKDQQYLMTNVNALLPQNGF 252

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA-----SLLS 261
                  DG+KTG T  +G  IV++     + +I V L                   L+ 
Sbjct: 253 APKNGEIDGLKTGNTDRAGKCIVSTGTFAGRRIILVALHTKGEWNDQSKMQQDFYNKLVD 312

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
              Y   + KK++ +        + N        +  T+K  +     MK    K +  +
Sbjct: 313 E--YQPVEIKKVSDLSAKLTSVKVKNGKNKNKANIKLTKKTTVWLPKNMKLQATKPTLRV 370

Query: 322 DFEKITLLKNKITK 335
             +    L   + K
Sbjct: 371 QGDDQKQLTAPVKK 384


>gi|167569264|ref|ZP_02362138.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           oklahomensis C6786]
          Length = 379

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 96/255 (37%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++     +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 123 LLASCGYTGAARSLLRSRAIYVVDERTGTVLIEKNANRVVPIASVTKLMTSMVALDTRAP 182

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L+ P+ +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 183 ----LSRPLRVSAQDRDYEKLTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYAGG 238

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+      T      +++   +    +       
Sbjct: 239 RPAFVAAMNRKARTLGMKHTHFVNATGLSPRNVSTAHDLSRLVAAASRYPRIKTFSTDTS 298

Query: 191 KGLEIKGKKYPNTNWA---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           K +     +    N               KTGF   +G  +V       + +  V+LGA 
Sbjct: 299 KTVFPGRGQLRYVNSDALVRAGDSNIMLQKTGFINEAGHCVVFRYAVRGRPVDIVLLGAP 358

Query: 248 DRNTRNKVSASLLSM 262
             +     +  +   
Sbjct: 359 GSSDHIADAMKIRRW 373


>gi|290890204|ref|ZP_06553285.1| hypothetical protein AWRIB429_0675 [Oenococcus oeni AWRIB429]
 gi|290480150|gb|EFD88793.1| hypothetical protein AWRIB429_0675 [Oenococcus oeni AWRIB429]
          Length = 423

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 129/366 (35%), Gaps = 41/366 (11%)

Query: 2   RQFLVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +QF++ +                  I  + K     ++D  TG ++A    D  +  AS+
Sbjct: 7   KQFILSLFAFFTVFSINVLKVKAAIITPSIKAKGAIVIDEKTGQILASKNADKRYPIASI 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           +KL+ AY+V   +KE K  L T + I       + E   +N       + T+   L+  +
Sbjct: 67  SKLLIAYLVEKRIKENKISLNTKVKIPSGIVAISQETTITNVPLSATRSYTIKELLEDAL 126

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------- 158
           + S N  A+A+  ++  +  K    M     +  +      +  G+              
Sbjct: 127 LPSGNGAAIALGAAITGSVSKTETAMEKLLSSWNIKGVKIYSPAGLTNGEMGAYKDKLAS 186

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTN---WAVGTF 210
               +  +A+++A +S  +  DFP            +           NTN     + + 
Sbjct: 187 DDAENKLSAKELAEVSRHLMLDFPSIRKITDKSSAVVSSTSGSSYTIENTNQLLKNIKSP 246

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD---RNTRNKVSASLLSMGFYNK 267
               G+KTG   + G N +       Q +I V+LG+      +TR   + S+LS      
Sbjct: 247 YKFTGIKTGSAESIGGNFIGETRIKGQKVITVVLGSGSMTDESTRFVQTVSMLSQ-LNKA 305

Query: 268 TDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
           +  KKI        +I    +      + +    +   +K+     + +K  K+      
Sbjct: 306 SSIKKIAKSEGSAKLIAATGKNGKVKTINSYRYSLFVPKKKTSLVYSSIKVKKNISYPLS 365

Query: 322 DFEKIT 327
             + I 
Sbjct: 366 KGKMIG 371


>gi|266623051|ref|ZP_06115986.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288865192|gb|EFC97490.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 309

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 103/255 (40%), Gaps = 22/255 (8%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +        S  +        + D +   VI    P     PAS+TK MTA +   +   
Sbjct: 57  LCVVTADTPSSDQAVTAEAAAVFDLSDKTVIFGKNPFEKLYPASITKTMTALLAIKY--- 113

Query: 72  KKAMLTTPITISKNASEYP--PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
               L+  +T+ + A       +    K G  +T++  L  L++ S ND   AIA  +  
Sbjct: 114 --GNLSDEVTVPEEAVITESGATLCGIKPGDKLTMEQLLYGLMLPSGNDAGAAIAVHMDG 171

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK----------- 178
           + +KF   MN  ++ LG + THF+N HG+    HYTTA D+ ++                
Sbjct: 172 SIEKFADRMNEEARKLGATGTHFVNPHGLNDENHYTTAYDLYLIFNEAMKYPDFRKVIGT 231

Query: 179 --TDFPQYMHYFQIKGLEIKGKKYPNT-NWAVGTFLGADGMKTGFTCASGFNI-VASAIQ 234
              D    +   +      K   +  T    +   L A G KTG T A+G  + +AS+  
Sbjct: 232 SSYDAVYALASGETTTKTWKQSNWYMTGERNMPEGLTALGGKTGTTRAAGSCLIMASSGS 291

Query: 235 GDQSLIAVILGALDR 249
                I+V+L A DR
Sbjct: 292 SGMEYISVVLKAPDR 306


>gi|224541857|ref|ZP_03682396.1| hypothetical protein CATMIT_01029 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525207|gb|EEF94312.1| hypothetical protein CATMIT_01029 [Catenibacterium mitsuokai DSM
           15897]
          Length = 294

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 91/286 (31%), Gaps = 27/286 (9%)

Query: 2   RQFLVIIAMAMLSNIFPF------------LSIAETNKLP--YYTLLDTNTGHVIAENYP 47
           R+++ ++    L +                     T         ++D +TG V      
Sbjct: 4   RKWICMLCAIFLLSACATKEPVKEEKKKVVSIPQPTLNTEDVSAVVMDADTGKVYYAKNE 63

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                PAS  KL++A V   + K+      T   I           +    G  +   + 
Sbjct: 64  QESRYPASTIKLLSALVAIDYYKDN--DALTTRNIMSLPDRVFIHTAPVYDGERIPFKDV 121

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           +  +++KS+N++A+ +AE+       F++ MN  +K +G +     N HG+         
Sbjct: 122 IHGMLLKSSNEMALTLAENYKGGYDGFIEAMNKRAKKIGCTKVDVSNPHGLSYADKGWLK 181

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV-----------GTFLGADGM 216
              +     +           +            N N  +                  G 
Sbjct: 182 ETCSTKDMALIAKEFYKNKKLRKIISTESYIFESNPNREMKNVRMTQKDSTYYDKRVIGG 241

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           KTGFT  +G  +V  +    +++I V+     R      +  LL  
Sbjct: 242 KTGFTNLAGRCLVTYSKVKKKTIITVVFKENTRGETYTDTKKLLDY 287


>gi|319442898|ref|ZP_07992054.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium variabile DSM
           44702]
          Length = 425

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 12/242 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y L D ++G+V+A   P   + PAS+ K++   V           +   + +++  +  
Sbjct: 114 SYVLYDVDSGNVLAAKDPYGLYRPASIIKILLVMVALDE-----LDMDQKVKVTEEMATV 168

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             S      G   T +  L+ L++ S ND A+A            V+ M + + +LG+ A
Sbjct: 169 DGSKVGVGPGGKYTAEQLLQGLVMNSGNDAALA-LAGALGGTDATVEKMQSLADSLGVQA 227

Query: 150 THFMNAHGVVQHGHYTTAR-----DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           T     +G+      TTA        A    +   D             +    +  + N
Sbjct: 228 TKVTTVNGLDTPEVQTTAYDLALVYRAAFQRQELRDLLGTEQATFPGYRDNPEFQISSDN 287

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSASLLSMG 263
             +  + G  G KTGFT  +     A+  +  ++L  V+L +     R  + + ++    
Sbjct: 288 GLLYDYPGTIGGKTGFTDNARHTYAAAVSRKGRTLGVVMLNSTVAAGRPWQQAETVFDAA 347

Query: 264 FY 265
           F 
Sbjct: 348 FD 349


>gi|224477927|ref|YP_002635533.1| penicillin binding protein 4 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422534|emb|CAL29348.1| penicillin binding protein 4 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 409

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 152/378 (40%), Gaps = 52/378 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M + L I+   +L                                     ++ T  G ++
Sbjct: 1   MNKVLSIVFSFLLLWTLFITPNTYAQQTPTEIAKQHHQPLNTQYNPKSAYVI-TQQGQIL 59

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE----YPPSNSTFKK 98
            + + +   +PAS TKLMT Y+V   +++ K   +  + I+ +  +       +    K 
Sbjct: 60  YDYHGNQSIDPASTTKLMTVYLVLEAIEQGKIKPSDSVKITPSYEKLAQLPNLTTFPLKN 119

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
             T T+D  LK  +++S+N   + +A+ L     KF  +MN  +K LG+  +HF N  G 
Sbjct: 120 KQTYTIDQLLKQAMLESSNAATLVLADKLSGDTSKFTDNMNAKAKELGMKHSHFTNPSGA 179

Query: 159 VQ--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                              ++TA+DM ILS  I  ++P+ + Y  +K  +  GKK  NTN
Sbjct: 180 NNLLIQQFAPKAYKSETFSHSTAQDMTILSKAIIKNYPKVLQYSSLKTDQQYGKKLTNTN 239

Query: 205 W----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNK 254
                +     GA G+KTG T  +G+N+V +  + +  +   ++          ++ R K
Sbjct: 240 LSLPGSQDALNGAQGLKTG-TSDNGYNLVLTTKRNNLRIDTTVMNVQPYPSETSKHARQK 298

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAK 314
           ++ +L    + +   RK I+    +       +   ++ + V    K+   Y  ++K  K
Sbjct: 299 IANALTEDAYKHYEYRKVISKGEHEL-DGKTYDVKQDLYDVVP---KDKNKYKLKIKNDK 354

Query: 315 DKESHFIDFEKITLLKNK 332
            +  +   F K +   + 
Sbjct: 355 LQIDYPRQFLKGSHAPSV 372


>gi|227544057|ref|ZP_03974106.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           CF48-3A]
 gi|300908323|ref|ZP_07125788.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           SD2112]
 gi|68160782|gb|AAY86837.1| lr0959 [Lactobacillus reuteri]
 gi|227185963|gb|EEI66034.1| serine family D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           CF48-3A]
 gi|300894570|gb|EFK87927.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus reuteri
           SD2112]
          Length = 414

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 113/371 (30%), Gaps = 50/371 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENY 46
           M++     A  +L      +              + A          +D  +G V+ +  
Sbjct: 1   MKKVKSFFAKLLLITAIISICLNGLGMFEKVHADTAAFQMDARAAYAIDAESGQVLYQKN 60

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
               +  AS+ K++T  V+   ++         I I+   ++                + 
Sbjct: 61  ATKRYPIASVIKILTLGVILQDIRNHHLKWDQKIKITPAVAKMADDWHFSNVPLMNGEEY 120

Query: 107 ALKLLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--- 159
            ++ L+       A    E    +   +   F + M   +K  G++     N  G+    
Sbjct: 121 TVRQLVDSMMLVSADGSTEALALADAGSTAAFNKKMMAFAKKAGVTDIKIYNMIGLPNGD 180

Query: 160 -----------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-----YPNT 203
                         +  +A+D+A++S  +  ++P+ +   + K       K       N 
Sbjct: 181 LGKHKLKGVDKDAENLLSAKDVALISKYLVENYPETLDITKQKFANFDVTKDQQYLMTNV 240

Query: 204 NW------AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           N               DG+KTG T  +G  IV++     + +I V L             
Sbjct: 241 NALLPQNGFAPKDGEIDGLKTGNTDRAGKCIVSTGTFTGRRIILVALHTKGEWNDQSKMQ 300

Query: 258 -----SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
                 L+    Y   + KK++ +        + N        +  T+K  +     MK 
Sbjct: 301 QDFYNKLVDE--YQPVEIKKVSDLSAKLTSVKVKNGKNKNKANIKLTKKTTVWLPKNMKL 358

Query: 313 AKDKESHFIDF 323
              K +  +  
Sbjct: 359 QATKPTLRVQG 369


>gi|330875216|gb|EGH09365.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 281

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 10/243 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-K 84
                  ++D  T  V+  + PD     AS+TKLMTA +V    +     +   I ++  
Sbjct: 10  LASGSAMVVDLQTDKVLYSSNPDVIVPIASVTKLMTAMIVLDAKQ----SMDEVIPVNIS 65

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
              E     S  K GS M   + L + ++ S N  A ++A S       F+  MN  +K 
Sbjct: 66  QTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKA 125

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY---- 200
           LG+  T ++   G+  +   T      ++    K      +   + K +  +   Y    
Sbjct: 126 LGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYILGF 185

Query: 201 -PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
               +            KTGFT  +G  +V      ++ +  VIL A  + T    ++ +
Sbjct: 186 SNTDHLVRKENWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRI 245

Query: 260 LSM 262
              
Sbjct: 246 RKW 248


>gi|269122254|ref|YP_003310431.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sebaldella
           termitidis ATCC 33386]
 gi|268616132|gb|ACZ10500.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sebaldella
           termitidis ATCC 33386]
          Length = 496

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/295 (21%), Positives = 110/295 (37%), Gaps = 15/295 (5%)

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             ASL K+M   V    + +    L   +   +  +    S    K G    L + L+  
Sbjct: 173 PTASLAKVMNILVALDQVDKGNKSLDDKVCFDQATANVGGSWLNVKAGECFVLRDLLRAE 232

Query: 112 IVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----HGHYTT 166
            + SAN+ A  +A+ +   +  KFV+ MN  +K LG+  T F    G+          T+
Sbjct: 233 NIYSANNAAYLVAKHIGNGSIDKFVELMNEKAKELGMKNTKFYTPAGLPTSMTGRQLDTS 292

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLE-----IKGKKYPNTNWAVGTFLGADGMKTGFT 221
             D   L         +   +   K L       +   YP+ N  +  F G  G+KTGF 
Sbjct: 293 TADDLYLLAMAAMKDKRIREWAGEKELILENSLGEQIIYPSRNHLLEKF-GIWGLKTGFH 351

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFY 281
             SG+NI+ ++ +G+  ++AV+LG +    R      LL+  F     +  I        
Sbjct: 352 NLSGYNIIVTSKKGNVEIVAVVLGEVTDAART----KLLTEEFQAIEAQLTIVKKAGSDM 407

Query: 282 QQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
            +    +    + +    +      N   +      +     +K T++   I KK
Sbjct: 408 GEFKLKDGKKKTIKGTLAEDVYEVKNNPYEYETRDLNIKAPVQKGTVIGELIIKK 462


>gi|46204603|ref|ZP_00049748.2| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 391

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 6/277 (2%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS---TFKKGSTMTLDNALKLLIVKSA 116
           MT Y++F  L++ +  L +P+TIS NA+               + + L  A+K   V   
Sbjct: 1   MTLYMLFEQLEKGRYELDSPLTISANAAAPGARRRLGLAHPASTILGLRTAIKCRSVTQV 60

Query: 117 NDIAVAIA---ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
              ++ +    E++  +E +F + M   +K LG+S TH+ NA G+      TTA D+ IL
Sbjct: 61  WPTSIRLPPSRENIAGSEPRFAEMMTRKAKALGMSRTHYANASGLPDPDQITTAHDLTIL 120

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
           +  I+  FP+Y  YFQ +    +G+   N N  +G   G DG+KTG+T  SGFN++ +A 
Sbjct: 121 ARAIQDRFPRYYRYFQTRSFAFRGRVIGNHNHLLGNVEGVDGIKTGYTRDSGFNLMTAAK 180

Query: 234 QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
            GD+ ++A++LG     +R+++ A L+           +    + +  ++     +    
Sbjct: 181 LGDRQIVAIVLGGKSGASRDRIMADLVRANLPRAYAGARQTAPVVEVAERGRPAVIAEAG 240

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
               T      + +  ++         +D    T   
Sbjct: 241 SRTRTEVASADDDDDAVQTTSSTSPAPLDIRPATTTP 277


>gi|255505331|ref|ZP_05345475.3| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
 gi|255268368|gb|EET61573.1| serine-type D-Ala-D-Ala carboxypeptidase [Bryantella formatexigens
           DSM 14469]
          Length = 326

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 96/251 (38%), Gaps = 22/251 (8%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                ++D +  +V+          PASLTK+MTA V   +       L   IT+ + A 
Sbjct: 76  AEAGAMMDLSEENVLYAKNVHERLYPASLTKIMTALVALKY-----GNLDDVITVDEVAL 130

Query: 88  EYPPSN--STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
           +  P +     + G   TL   +  L++ S ND   AIA  +  + + FV  MN  + ++
Sbjct: 131 DIDPESSVCYLELGDQYTLRQLIYGLLIASGNDAGNAIAYHVGGSIENFVAMMNQEAASI 190

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---MHYFQIKGLEIKGKKYPN 202
           G + THFMNAHG+    HYTT  D+ ++                            +   
Sbjct: 191 GATNTHFMNAHGLQDENHYTTPYDIYLMFQEALKYDVFQDAISKQNFTVTYTAGDGEQYE 250

Query: 203 TNWAVGTFLG-----------ADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRN 250
             W   ++               G KTG T  +G  +   +      S  +VI+ + ++ 
Sbjct: 251 RTWYATSYYFTGEAAAPDGVTVFGGKTGTTDEAGSCLALLSKDAYGNSYFSVIMKSDNKA 310

Query: 251 TRNKVSASLLS 261
              +    LLS
Sbjct: 311 DLYEEMNELLS 321


>gi|255323933|ref|ZP_05365059.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           tuberculostearicum SK141]
 gi|255299113|gb|EET78404.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           tuberculostearicum SK141]
          Length = 397

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 13/248 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + + D ++G +IA   P+  + PAS+ K + A VV          L   + + +
Sbjct: 89  DVVAAAWMVSDIDSGEIIAMKDPNGRYRPASIIKALLALVVIDE-----LDLHQKVEVGE 143

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            +++   S      G T T++  L+ L++ S ND A A+A+ L   ++  ++ +N  +  
Sbjct: 144 ESAQIDGSAVGIGPGGTYTVEQLLQGLLMASGNDAAHALAQEL-GGDEATLRKVNEKAAE 202

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKK 199
           +G ++T+  +  G+   G  T+A D++ +      +                  ++ G +
Sbjct: 203 IGTNSTYAASYSGLDAPGMSTSAEDISRIYRAAFHNPTFARIVDTESVDFPGWGDLDGYQ 262

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA--LDRNTRNKVSA 257
             N N          G KTGFT  +    V +  +  + L AV+L           + + 
Sbjct: 263 LGNDNGLFLNDPDGIGGKTGFTDDAHHTFVGALDRHGRRLQAVLLDTTVEHGPRAWEQAQ 322

Query: 258 SLLSMGFY 265
            LL   + 
Sbjct: 323 KLLHEAYK 330


>gi|116490774|ref|YP_810318.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
 gi|116091499|gb|ABJ56653.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
          Length = 423

 Score =  108 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 129/366 (35%), Gaps = 41/366 (11%)

Query: 2   RQFLVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +QF++ +                  I  + K     ++D  TG ++A    D  +  AS+
Sbjct: 7   KQFILSLFAFFTVFSINVLKVKAAIITPSIKAKGAIVIDEKTGQILASKNADKRYPIASI 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           +KL+ AY+V   +KE K  L T + I       + E   +N       + T+   L+  +
Sbjct: 67  SKLLIAYLVEKRIKENKISLNTKVKIPSGIVAISQETTITNVPLSATRSYTIKELLEDAL 126

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------- 158
           + S N  A+A+  ++  +  K    M     +  +      +  G+              
Sbjct: 127 LPSGNGAAIALGAAITGSVSKTETAMEKLLSSWNIKGVKIYSPAGLTNGEMGAYKDKSAS 186

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTN---WAVGTF 210
               +  +A+++A +S  +  DFP            +           NTN     + + 
Sbjct: 187 DDAENKLSAKELAEVSRHLMLDFPSIRKITDKSSAVVSSTSGSSYTIENTNQLLKNIKSP 246

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD---RNTRNKVSASLLSMGFYNK 267
               G+KTG   + G N +       Q +I V+LG+      +TR   + S+LS      
Sbjct: 247 YKFTGIKTGSAESIGGNFIGETRIKGQKVITVVLGSGSMTDESTRFVQTVSMLSQ-LNKA 305

Query: 268 TDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
           +  KKI        +I    +      + +    +   +K+     + +K  K+      
Sbjct: 306 SSIKKIAKSEGSAKLIAATGKNGKVKTINSYRYSLFVPKKKTSLVYSSIKVKKNISYPLS 365

Query: 322 DFEKIT 327
             + I 
Sbjct: 366 KGKMIG 371


>gi|323486924|ref|ZP_08092240.1| hypothetical protein HMPREF9474_03991 [Clostridium symbiosum
           WAL-14163]
 gi|323691972|ref|ZP_08106221.1| hypothetical protein HMPREF9475_01084 [Clostridium symbiosum
           WAL-14673]
 gi|323399787|gb|EGA92169.1| hypothetical protein HMPREF9474_03991 [Clostridium symbiosum
           WAL-14163]
 gi|323503981|gb|EGB19794.1| hypothetical protein HMPREF9475_01084 [Clostridium symbiosum
           WAL-14673]
          Length = 321

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 24/253 (9%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 L +     V+          PAS TK+MTA +           L+  +T++++A
Sbjct: 71  NAEAGALFNVTDRSVVYSKNAFERLYPASTTKVMTAIIALEE-----GNLSDQVTVTEDA 125

Query: 87  SEYPPSN--STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                       K G  +T+ + L  L++ S ND A AIA  +  +   F   MN  ++ 
Sbjct: 126 VITEAGASLCGIKPGDVITMQDLLYGLMMPSGNDAANAIAVHMYGSIDAFADRMNVRARE 185

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK------ 198
           LG + THFMN  G+    HYTTA D+ ++        P +             +      
Sbjct: 186 LGATGTHFMNPSGLTDENHYTTAYDLYLMF-NEAMKLPLFREIIAEDSYTANYQNGAGEA 244

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNI-VASAIQGDQSLIAVILGALD 248
                     Y          +   G KTG T A+G+ + +AS    D+  I+V+L +  
Sbjct: 245 VSKTWTVGNWYQKGERETPAGVSVLGGKTGTTQAAGYCLIMASNDSQDKEYISVVLKSDS 304

Query: 249 RNTRNKVSASLLS 261
           R +      +++S
Sbjct: 305 RPSLYDNMTNIIS 317


>gi|254390349|ref|ZP_05005566.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294813829|ref|ZP_06772472.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197704053|gb|EDY49865.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294326428|gb|EFG08071.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 315

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 19/276 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L++ A  + +        A         L+D  TG  +           AS TK+ TA  
Sbjct: 23  LLLTASPLTAPAHAATRPAPKISGAAGYLMDLKTGKSVFSKSDSTRRQMASTTKVATAIT 82

Query: 65  VFSFLKEK-KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V +         LT   +     +    S +  K G  +T+   L  L++ S  D A A+
Sbjct: 83  VLTTKGLDLNRKLTVKQSYRDYVAREKGSTADLKTGDKLTVRQLLHALMLPSGCDAAYAL 142

Query: 124 AESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGV-VQHGHYTTARDMAILSWR 176
           A++  K      +       MN  + +L L  T F +  G+     +YTT  D+  L+  
Sbjct: 143 ADAFGKGTTTAARTKSFIGMMNKKAADLKLKNTKFDSFDGISPGGQNYTTPSDLTKLAKH 202

Query: 177 IKTDFPQYMHYFQIKGL--------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             ++                     + +   + NTN  +G++ G  G+KTG    +G  +
Sbjct: 203 AFSNQLFRDVVKTRTYHATATAANGKKRYYTWTNTNTLLGSYQGMVGIKTGSGSKAGKCL 262

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
           V +A +G ++ I V+L   D   R + +  +L+  F
Sbjct: 263 VFAATRGSKTYIGVVLNGPD---RFRDAEKMLNHAF 295


>gi|118587105|ref|ZP_01544535.1| serine-type D-Ala-D-Ala carboxypeptidase [Oenococcus oeni ATCC
           BAA-1163]
 gi|118432515|gb|EAV39251.1| serine-type D-Ala-D-Ala carboxypeptidase [Oenococcus oeni ATCC
           BAA-1163]
          Length = 423

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 129/366 (35%), Gaps = 41/366 (11%)

Query: 2   RQFLVIIAMAMLSNIFP-----FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +QF++ +                  I  + K     ++D  TG ++A    D  +  AS+
Sbjct: 7   KQFILSLFAFFTVFSINVLKVKAEIITPSIKAKGAIVIDEKTGQILASKNADKRYPIASI 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           +KL+ AY+V   +KE K  L T + I       + E   +N       + T+   L+  +
Sbjct: 67  SKLLIAYLVEKRIKENKISLNTKVKIPSGIVAISQETTITNVPLSATRSYTIKELLEDAL 126

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------- 158
           + S N  A+A+  ++  +  K    M     +  +      +  G+              
Sbjct: 127 LPSGNGAAIALGAAITGSVSKTETAMEKLLSSWNIKGVKIYSPAGLTNGEMGAYKDKSAS 186

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTN---WAVGTF 210
               +  +A+++A +S  +  DFP            +           NTN     + + 
Sbjct: 187 DDAENKLSAKELAEVSRHLMLDFPSIRKITDKSSAVVSSTSGSSYTIENTNQLLKNIKSP 246

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD---RNTRNKVSASLLSMGFYNK 267
               G+KTG   + G N +       Q +I V+LG+      +TR   + S+LS      
Sbjct: 247 YKFTGIKTGSAESIGGNFIGETRIKGQKVITVVLGSGSMTDESTRFVQTVSMLSQ-LNKA 305

Query: 268 TDRKKI------NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
           +  KKI        +I    +      + +    +   +K+     + +K  K+      
Sbjct: 306 SSIKKIAKSEGSAKLIAATGKNGKVKTINSYRYSLFVPKKKTNLVYSSIKVKKNISYPLS 365

Query: 322 DFEKIT 327
             + I 
Sbjct: 366 KGKMIG 371


>gi|7766853|pdb|1ES4|A Chain A, C98n Mutant Of Streptomyces K15 Dd-Transpeptidase
          Length = 262

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S TK+MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ S ND A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGNDAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +     R   +  +++ GF 
Sbjct: 240 LASTSIPARESDATKIMNYGFA 261


>gi|78189048|ref|YP_379386.1| D-alanyl-D-alanine carboxypeptidase [Chlorobium chlorochromatii
           CaD3]
 gi|78171247|gb|ABB28343.1| D-alanyl-D-alanine carboxypeptidase [Chlorobium chlorochromatii
           CaD3]
          Length = 473

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 15/245 (6%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             Y L +  T  ++       P  PASLTK++T+ +     +     L   + I++ ++ 
Sbjct: 64  SAYMLKEYGTPSMLMGKNISTPLPPASLTKVLTSIMAIESGR-----LLQDVVITRESTL 118

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
             PS + F  G  + L + +K  +V S+ND A AI   L  +   FV  MN  ++ +G+ 
Sbjct: 119 VEPSKAGFTVGERIKLIDLVKAAMVSSSNDAAFAIGIYLSGSVDAFVDAMNYKARQIGMR 178

Query: 149 ATHFMNAHGVV---QHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKKY 200
            +HF N  G       G+ +TA D+  L+     +          +         K    
Sbjct: 179 NSHFTNPAGYDRGQYAGNVSTAEDLMRLTEYAVRNSTFNQIARMDRAVFVEQSTRKVYNL 238

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
              N  +  +  + G+KTG+T  +G  ++A A++GD+ L+ V+L A  + +R   +AS+ 
Sbjct: 239 RTHNKLLAHYPHSVGIKTGWTTRAGGCLIARAVKGDKDLLVVMLNA--KISRWDTAASMF 296

Query: 261 SMGFY 265
            + F 
Sbjct: 297 DLAFN 301


>gi|218506880|ref|ZP_03504758.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli Brasil
           5]
          Length = 247

 Score =  108 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 75/245 (30%), Positives = 121/245 (49%), Gaps = 4/245 (1%)

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           + F  LK  K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A A+
Sbjct: 1   LTFEALKRGKIDWDTPIRMSKYAAARPPTKLGVKAGGTITVREAVYGMIVKSANDAAAAM 60

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
           AE+L  +E  F   M   ++ LG+S T F+NA G+      TTARDM+ L   +  ++P 
Sbjct: 61  AETLGGSESGFAWMMTAKARQLGMSRTVFVNASGLPNPSQVTTARDMSTLGVALMKNYPN 120

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               F +     +GK     N  +  + G DG+KTG+T ASGFN+V++   G++ ++ V+
Sbjct: 121 EYRLFSMASFNFRGKTVRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAVRDGNRRVVGVV 180

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTD----RKKINYIIKDFYQQNLSNEVPNISEEVCTT 299
           LG     +R+   A LL       +     R   +   K+  +   + +  ++   +   
Sbjct: 181 LGGRTARSRDAKMAGLLDRYLGRASSSGGARLVASVGAKEPVEVASAADASDVPVPLNAP 240

Query: 300 QKEII 304
           +    
Sbjct: 241 RPAGD 245


>gi|326442247|ref|ZP_08216981.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 305

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 19/276 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L++ A  + +        A         L+D  TG  +           AS TK+ TA  
Sbjct: 13  LLLTASPLTAPAHAATRPAPKISGAAGYLMDLKTGKSVFSKSDSTRRQMASTTKVATAIT 72

Query: 65  VFSFLKEK-KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           V +         LT   +     +    S +  K G  +T+   L  L++ S  D A A+
Sbjct: 73  VLTTKGLDLNRKLTVKQSYRDYVAREKGSTADLKTGDKLTVRQLLHALMLPSGCDAAYAL 132

Query: 124 AESLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGV-VQHGHYTTARDMAILSWR 176
           A++  K      +       MN  + +L L  T F +  G+     +YTT  D+  L+  
Sbjct: 133 ADAFGKGTTTAARTKSFIGMMNKKAADLKLKNTKFDSFDGISPGGQNYTTPSDLTKLAKH 192

Query: 177 IKTDFPQYMHYFQIKGL--------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             ++                     + +   + NTN  +G++ G  G+KTG    +G  +
Sbjct: 193 AFSNQLFRDVVKTRTYHATATAANGKKRYYTWTNTNTLLGSYQGMVGIKTGSGSKAGKCL 252

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
           V +A +G ++ I V+L   D   R + +  +L+  F
Sbjct: 253 VFAATRGSKTYIGVVLNGPD---RFRDAEKMLNHAF 285


>gi|167758172|ref|ZP_02430299.1| hypothetical protein CLOSCI_00510 [Clostridium scindens ATCC 35704]
 gi|167664069|gb|EDS08199.1| hypothetical protein CLOSCI_00510 [Clostridium scindens ATCC 35704]
          Length = 342

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 24/276 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L    + + S    F    +   L    L D   G V           PAS TK+MTA V
Sbjct: 54  LFASDLCVASENVAFQGAPDPAGLHAAGLFDVEDGKVDFAYNLHDRLYPASTTKIMTALV 113

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDIA 120
                      LT  +T+  +A              K G  MTL + L  L+++S ND A
Sbjct: 114 ALKK-----GNLTDMVTVQADADAANFAADEKTCGIKAGDQMTLGDLLHGLLMESGNDAA 168

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI--- 177
           VAIA+ +    ++F Q MN  ++ L  + THF+N++G+    HYTTA D+ ++       
Sbjct: 169 VAIADYIGGNSEQFAQMMNEEAQALMATKTHFLNSNGLHNENHYTTAYDLYLIFNECIKH 228

Query: 178 -----KTDFPQYMHYFQIKGLEIKGKKYPNTNWAV------GTFLGADGMKTGFTCASGF 226
                  +  +Y          ++   +  TN+               G KTG T  +G 
Sbjct: 229 DEFVDIINTAEYTANITGADKTMRQVAWKQTNFYALGEAELPQSATIIGGKTGTTEPAGN 288

Query: 227 NIVAS-AIQGDQSLIAVILGALDRNTRNKVSASLLS 261
            ++        +  I++++GA  ++   +   ++++
Sbjct: 289 CLILLEKDSSGRPYISIVMGADTKSLLYQDMTAIIN 324


>gi|302879653|ref|YP_003848217.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Gallionella
           capsiferriformans ES-2]
 gi|302582442|gb|ADL56453.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Gallionella
           capsiferriformans ES-2]
          Length = 347

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 98/256 (38%), Gaps = 11/256 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           LS+       +         + D  T   +    PD     AS+TKLMTA VV       
Sbjct: 83  LSSAAFQPVSSPKLASSIALIYDEQTQRPLYTKNPDAVAPIASITKLMTAMVVLDAEP-- 140

Query: 73  KAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              L   +++ +   +    ++S    G+T      LKL ++ S N  A  +A +     
Sbjct: 141 --DLNEALSVGEADFDILKGTHSRLGVGTTFIRSEMLKLALMSSENRAASVLARNYPGGM 198

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHY 187
              V  MN  ++ LG++ T F +  G+    + +TARD+  +                  
Sbjct: 199 AAAVAAMNAKARKLGMTHTTFRDPTGL-NSENVSTARDLVKMVAAARNYKLIHQYTTTAT 257

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
             ++G   +   + NTN  V       G  KTG+   +G  +V  A    + +I V+L +
Sbjct: 258 HSVEGARGRELTFNNTNPLVKNASWEIGVSKTGYINEAGRCLVMQAQIRQRPVIIVLLDS 317

Query: 247 LDRNTRNKVSASLLSM 262
           + + TR   +  +   
Sbjct: 318 VGKTTRIGDANRVKKW 333


>gi|259502438|ref|ZP_05745340.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           antri DSM 16041]
 gi|259169581|gb|EEW54076.1| D-alanyl-D-alanine serine-type carboxypeptidase [Lactobacillus
           antri DSM 16041]
          Length = 412

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 113/328 (34%), Gaps = 32/328 (9%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           K      +D  +G V+ +      +  AS+TK++T  V+   ++  K      IT S   
Sbjct: 37  KARSAYAIDAESGQVLYQKNAQKTYPVASVTKILTLAVIEQDIRAHKLSWDQKITASPAV 96

Query: 87  SEY----PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
           ++       SN     G   T+   ++ +++ SA+    A+A +   +   F Q M   +
Sbjct: 97  AQMANDPRCSNVQLNAGEKYTVKQLVESMMLVSADGSTEALALADAGSTAAFNQKMQAVA 156

Query: 143 KNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYF 188
              G+      N  G+                  +  +A+D+A+++  +  ++P+ +   
Sbjct: 157 HKAGVHDAKIYNMVGLPNSYMGAHALKGVDKDAENLFSAKDIALIAKYLVEEYPETLQIT 216

Query: 189 QIKGLEI-----KGKKYPNTNWAVGT------FLGADGMKTGFTCASGFNIVASAIQGDQ 237
             K  +        +   N N  +            DG+KTG T  +G  IV +     +
Sbjct: 217 STKFADFKVSADHKEHMTNINSLLPQNGAAPKDWQIDGLKTGNTDEAGKCIVTTGTYAGR 276

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII---KDFYQQNLSNEVPNISE 294
            +I V L                     N      +N I    K   Q+++ +     S 
Sbjct: 277 RVIVVALHTDGDWNDQSKMQKEFYEALANGYQPVALNSIKAFPKKLQQRHVVHAKKQHST 336

Query: 295 EVCTTQKEIINYNTQMKEAKDKESHFID 322
            +  T+K  I        A+      +D
Sbjct: 337 GLALTKKTAIWLPKNTSWAQTSPQLQLD 364


>gi|226324960|ref|ZP_03800478.1| hypothetical protein COPCOM_02752 [Coprococcus comes ATCC 27758]
 gi|225206308|gb|EEG88662.1| hypothetical protein COPCOM_02752 [Coprococcus comes ATCC 27758]
          Length = 292

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 106/272 (38%), Gaps = 26/272 (9%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + +  N        E N+L    L D     V+          PAS TK+MTA +     
Sbjct: 20  LCVAQNDVALQGYTEDNELHSAALFDLTGERVLYSYKAHERLYPASTTKIMTALLAIENA 79

Query: 70  KEKKAMLTTPITISKN----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                 L   +TIS N    +           KG   TL + L  L++ S ND A AIAE
Sbjct: 80  -----NLDDQVTISGNADASSFSADAQVCGLAKGEVWTLRDLLGALLLYSGNDAATAIAE 134

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----- 180
            +  +E+ FV  MN  ++ L  + THFMN HG+    HYTTA D+ ++            
Sbjct: 135 YVGGSEEAFVNMMNRRAQELMANGTHFMNPHGLHDDNHYTTAYDLYLIFNECIKHEDFVN 194

Query: 181 ---------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                    +   +     + L      Y      V   +   G KTG T  +G+ ++  
Sbjct: 195 IIQSEAYTAYYTDVDGNSQEVLFTPTNLYAQGEVDVPENVTIVGGKTGTTDEAGYCLI-L 253

Query: 232 AIQG--DQSLIAVILGALDRNTRNKVSASLLS 261
             +   D   I++++GA ++    +   SL+ 
Sbjct: 254 MEKDSSDNPYISIVMGASEKPVLYEDMTSLIE 285


>gi|182417161|ref|ZP_02948532.1| D-alanyl-D-alanine carboxypeptidase family [Clostridium butyricum
           5521]
 gi|237668489|ref|ZP_04528473.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182379003|gb|EDT76509.1| D-alanyl-D-alanine carboxypeptidase family [Clostridium butyricum
           5521]
 gi|237656837|gb|EEP54393.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 427

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/287 (22%), Positives = 121/287 (42%), Gaps = 13/287 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           ++  ++ +++++ S +    + A               +D  TG +I     D    PAS
Sbjct: 7   LKTLILTLSISLFSPLASINAKAATTAQPDINAQAAITMDLETGEIIYCKDADSKRYPAS 66

Query: 56  L-TKLMTAYVVFSFLKEKKAMLTTPITISKNAS-EYPPSNSTFKKGSTMTLDNALKLLIV 113
               L    +  +  K  +   T    I    S      +++ K G TM+ D+ +K L++
Sbjct: 67  TTKLLTGLLLAENKQKSDEIAFTESAKIQPEYSLNINFMHNSMKVGDTMSADDVMKGLLL 126

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S ND A  IA+++    +KF   MN  +K +G + +HF+ A+G+    HYTTA D++++
Sbjct: 127 FSGNDTAYMIADNVAGNSQKFADMMNAKAKEIGANNSHFVTANGLHDENHYTTAYDLSLI 186

Query: 174 SWRIKTDFPQYMHYF-QIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVAS 231
           +     +  +          ++I G K    N  +G    G    KTG T A+G  + A 
Sbjct: 187 TKAAFQNDWERETMELADASIQINGAKVLLENRNLGLGKNGNIAGKTGLTNAAGGCLAAV 246

Query: 232 AIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKIN 274
                + LI V+L +   +    T+     S+++  +       K +
Sbjct: 247 YEVNGRKLIGVVLKSRQVDNADMTKFNDMDSIMNYSYNTSKTVYKSS 293


>gi|161138122|gb|ABX58032.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum brasilense]
          Length = 276

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 8/211 (3%)

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           +L  +E KF + M   ++  G+  T F N++G+      TTAR  +ILS  + +D  +Y 
Sbjct: 2   ALGGSEAKFAEMMTRKAREXGMRNTVFXNSNGLPNMQQVTTARXFSILSRAMLSDHSRYY 61

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            YF  +     G+   N N  +  + G DG+KTG+T ASGFN+ ASA++  + L+AV+LG
Sbjct: 62  PYFSRRAFVYGGRSLNNHNRLMSRYEGMDGIKTGYTVASGFNLAASAVRDGRRLVAVVLG 121

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDR-------KKINYIIKDFYQQNLSNEVPNISEEVCT 298
                +R+    ++L   F   +         +  +        +      P    ++ +
Sbjct: 122 GKSAASRDARMEAILDKAFDKPSRGSEAPVVARAGDEDTPRAVAKGRPPAKPETIAQLAS 181

Query: 299 TQKEIINYNTQMKE-AKDKESHFIDFEKITL 328
           T           +   +D ++   D  K  +
Sbjct: 182 TVSTPAAVRPPARARDEDADTTKADGSKWGV 212


>gi|7766852|pdb|1ES3|A Chain A, C98a Mutant Of Streptomyces K15 Dd-Transpeptidase
          Length = 262

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 104/262 (39%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S TK+MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ S  D A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGADAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +     R   +  +++ GF 
Sbjct: 240 LASTSIPARESDATKIMNYGFA 261


>gi|311739947|ref|ZP_07713781.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311305020|gb|EFQ81089.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 401

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 13/248 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 + + D ++G +IA   P+  + PAS+ K + A VV          L   + + +
Sbjct: 89  DVVAAAWMVSDIDSGEIIAMKDPNGRYRPASIIKALLALVVIDE-----LDLHQKVEVGE 143

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            +++   S      G T T++  L+ L++ S ND A A+A+ L   ++  ++ +N+ +  
Sbjct: 144 ESAQIDGSAVGIGPGGTYTVEQLLQGLLMASGNDAAHALAQEL-GGDEATLRKVNDKAAE 202

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKK 199
           +G ++T+  +  G+   G  T+A D++ +      +                  ++ G +
Sbjct: 203 IGTNSTYAASYSGLDAPGMSTSAEDISRIYRAAFHNPTFARIVDTESVDFPGWGDLDGYQ 262

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA--LDRNTRNKVSA 257
             N N          G KTGFT  +    V +  +  + L AV+L           + + 
Sbjct: 263 LGNDNGLFLNDPDGIGGKTGFTDDAHHTFVGALDRHGRRLQAVLLDTTVEHGPRAWEQAQ 322

Query: 258 SLLSMGFY 265
            LL   + 
Sbjct: 323 KLLHEAYK 330


>gi|126456044|ref|YP_001074647.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242313626|ref|ZP_04812643.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
 gi|126229812|gb|ABN93225.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|242136865|gb|EES23268.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 350

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 90  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 145

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 146 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 205

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 206 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 264

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 265 RTLYYHSTNVLLRDSAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 324

Query: 255 VSASL 259
            +A L
Sbjct: 325 DAARL 329


>gi|167848574|ref|ZP_02474082.1| family S11 unassigned peptidase [Burkholderia pseudomallei B7210]
          Length = 349

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 101/245 (41%), Gaps = 10/245 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S +   +     ++D +TG  + +         AS+TKLMTA VV          L   
Sbjct: 89  ASQSFGLRSNIVYMVDQHTGETLFDRNSRSVVPIASVTKLMTAMVVLDSNAP----LDER 144

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           I ++ +  +      +     S ++ D+ L + ++ S N  A A++       + FV  M
Sbjct: 145 IEVTDDDRDQDKFTGSRLAIGSALSRDDMLHIALMASENRAAAALSRYYPGGREAFVDAM 204

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--- 195
           N  +++LG+  T+F N  G+    + ++ARD+A +            +   +K       
Sbjct: 205 NRKARSLGMVDTYFENPTGL-SKHNVSSARDLAKMVEAAYQYPLIRQYSTDLKYDVDTGL 263

Query: 196 KGKKYPNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y +TN  +       G  KTG+   SG  +V       + ++ V+L +  R++   
Sbjct: 264 RTLYYHSTNVLLRDSAWNIGVQKTGYIKESGICLVMQTTIDGRDVVMVLLDSAGRHSDFF 323

Query: 255 VSASL 259
            +A L
Sbjct: 324 DAARL 328


>gi|326563690|gb|EGE13942.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis 103P14B1]
 gi|326566458|gb|EGE16608.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis BC1]
 gi|326573300|gb|EGE23268.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis 101P30B1]
 gi|326575803|gb|EGE25726.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis CO72]
          Length = 386

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 16/255 (6%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            F ++  + +     + D   G +I     D   + AS++K+MTA V+     + +    
Sbjct: 129 SFYALPISTRSAAVLVYDLQDGKLIYGKNADVQRSIASISKVMTAMVILDAELDMR---E 185

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               I+ +      +++  K G  MT      +++++S N  A A+A +       F+  
Sbjct: 186 EITLIASDLIGAKQASTRLKAGDRMTRSEFTLMMLMRSENPAAKALARTYPGGYDAFIAA 245

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEI 195
           MN  + +LG+  T F ++ G+    + ++A D+ I+         +    ++      + 
Sbjct: 246 MNQKAYDLGMYQTKFSDSSGL-DPRNMSSANDLLIMMKAVNSSPRYHSIRNFSTAPHYDF 304

Query: 196 KGKKY---------PNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILG 245
               Y          NTN  V       G  KTG+   +G+++V      ++  I V+LG
Sbjct: 305 YIANYGSGDRIYKGNNTNRLVREGAYPIGVQKTGYIREAGYSVVMETNINNRPAIVVLLG 364

Query: 246 ALDRNTRNKVSASLL 260
           A +   R   + ++L
Sbjct: 365 ASNSANRWSDAETIL 379


>gi|302559594|ref|ZP_07311936.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302477212|gb|EFL40305.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 282

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 16/276 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +IA   L       + A +       +++  TG  +     D   +  S TK+MTA VV 
Sbjct: 6   VIASGALYAAPAQAATAPSVVAKGGYVMNNATGKSLYTKAADTRRSTGSTTKIMTAKVVL 65

Query: 67  SFLKEK-KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           +       A +T  +  S    +   S++    G  +T+   L  L++ S  D A A+A+
Sbjct: 66  AQKNLNLDAKVTIQMAYSDYIVKNNASSARLIVGDKVTVRQLLYGLMLPSGCDAAYALAD 125

Query: 126 SLCKTEKKFVQ------HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL------ 173
                  +  +       MN  +  +GL  THF +  G+ +  +Y+T RD+  +      
Sbjct: 126 KFGTGSTRAARVKSFIGKMNAEATKMGLKNTHFDSFDGIGKGSNYSTPRDLTKIASSAMK 185

Query: 174 ---SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
                 I              G       + NTN  + ++ G  G+KTG    + + +V 
Sbjct: 186 SSTFRSIVKTKKYTAKTVTKTGSTRTMAPWTNTNTLLSSYSGTIGVKTGSGPEAKYCLVF 245

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +A +  +++I  +L +     R   +  LL  GF  
Sbjct: 246 AATRNGKTVIGTVLASSSATQRETDAKKLLGYGFSK 281


>gi|326560224|gb|EGE10612.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis 7169]
 gi|326562868|gb|EGE13155.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis 46P47B1]
 gi|326570266|gb|EGE20311.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis BC8]
 gi|326571002|gb|EGE21026.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis BC7]
 gi|326576883|gb|EGE26789.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis O35E]
          Length = 386

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 16/255 (6%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            F ++  + +     + D   G +I     D   + AS++K+MTA V+     + +    
Sbjct: 129 SFYALPISTRSAAVLVYDLQDGKLIYGKNADVQRSIASISKVMTAMVILDAELDMR---E 185

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               I+ +      +++  K G  MT      +++++S N  A A+A +       F+  
Sbjct: 186 EITLIASDLIGAKQASTRLKAGDRMTRSEFTLMMLMRSENPAAKALARTYPGGYDAFIAA 245

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEI 195
           MN  + +LG+  T F ++ G+    + ++A D+ I+         +    ++      + 
Sbjct: 246 MNQKAYDLGMYQTKFSDSSGL-DPRNMSSANDLLIMMKAVNSSPRYHSIRNFSTAPHYDF 304

Query: 196 KGKKY---------PNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILG 245
               Y          NTN  V       G  KTG+   +G+++V      ++  I V+LG
Sbjct: 305 YIANYGSGDRIYKGNNTNRLVREGAYPIGVQKTGYIREAGYSVVMETNINNRPAIVVLLG 364

Query: 246 ALDRNTRNKVSASLL 260
           A +   R   + ++L
Sbjct: 365 ASNSANRWSDAETIL 379


>gi|167580237|ref|ZP_02373111.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis TXDOH]
          Length = 355

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 91/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 99  LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVVPIASVTKLMTSMVALDTRAP 158

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS +   + L + ++ S N  A A++      
Sbjct: 159 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLPRRDMLHIALMSSENRAAAALSRDYPGG 214

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+      T      +++   +    +       
Sbjct: 215 RPAFVAAMNRKARTLGMKHTHFVNATGLSPRNVSTARDLSRLVAAASRYPHIKSFSTDTS 274

Query: 191 KGLEIKGKKYPNTNWA---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           K +     +    N               KTGF   +G  +V       + +  V+LGA 
Sbjct: 275 KTVFPGRGQLHYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGAP 334

Query: 248 DRNTRNKVSASLLSM 262
                   +A +   
Sbjct: 335 GPRDHVADAAKIRRW 349


>gi|149377678|ref|ZP_01895414.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Marinobacter
           algicola DG893]
 gi|149358031|gb|EDM46517.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Marinobacter
           algicola DG893]
          Length = 304

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 100/273 (36%), Gaps = 15/273 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M +  +++A+ +L ++    ++A          +        + G V      D     A
Sbjct: 1   MIRTAIVLALTVLCSLNVSRAMAIERSELQLASVNAAVAYADDEGLV-YGKNADRRVPIA 59

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S+TKLMTA VV    +     L       ++      + +  +  S +   + L++ ++ 
Sbjct: 60  SITKLMTALVVMESGEPLTEWLDFRE---RHIPAPANAYTRIRVSSELRRSDVLRIALMS 116

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S N  A  +A         F++ MN  +  LG+  T F++  G+      T A  + ++ 
Sbjct: 117 SENFAAHTLARHHPGGYDAFIEAMNAKAVELGMLKTTFVDPTGLSVDNRSTAADLVRLVR 176

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYP----NTN-WAVGTFLGADGMKTGFTCASGFNIV 229
              +    +     +    + +  +Y     NTN        G    KTG+   +G  +V
Sbjct: 177 AASQYPQIREYSTTRYFTAQFRQPRYRLAFGNTNVLVHRESWGVGISKTGYLSEAGRCLV 236

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                  + L+ V+L +L   +    +  +   
Sbjct: 237 MLFELDGKPLVTVLLDSLGTRSPMGDAGRIKRW 269


>gi|331014403|gb|EGH94459.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 311

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/265 (20%), Positives = 96/265 (36%), Gaps = 13/265 (4%)

Query: 7   IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
             +   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18  AFSTTALANESAVLNRDPSNLHLASGSAMVVDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64  VVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +V    +     +   I ++     E     S  K GS M   + L + ++ S N  A +
Sbjct: 78  IVLDAKQ----SMDEVIPVNISQTPEMKGVFSRVKLGSEMNRRDMLLITLMSSENRAAAS 133

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A S       F+  MN  +K LG+  T ++    +  +   T      ++    K    
Sbjct: 134 LAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTSLSVYNVSTARDLTKLVMAARKYPLL 193

Query: 183 QYMHYFQIKGLEIKGKKY-----PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +   + K +  +   Y        +            KTGFT  +G  +V      ++
Sbjct: 194 SELSTTEQKTVTFRKPTYILGFSNTDHLVRKENWDIKLTKTGFTNQAGHCLVLLTSMANR 253

Query: 238 SLIAVILGALDRNTRNKVSASLLSM 262
            +  VIL A  + T    ++ +   
Sbjct: 254 PVSVVILDAFGKYTHFADASRIRKW 278


>gi|330445937|ref|ZP_08309589.1| penicillin-binding protein 7 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490128|dbj|GAA04086.1| penicillin-binding protein 7 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 298

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 99/276 (35%), Gaps = 18/276 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------SIAETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           MR   ++       +                         ++D +TG  + +   +    
Sbjct: 1   MRNAFILFFTLASISFSSVASINTSKLDPNKLQTASVSNYVIDLSTGKTLYKKNANVKMP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLL 111
            ASLTKLMTA V        K  L   +T +  +      + +  + GST++    + + 
Sbjct: 61  IASLTKLMTAMVTLDA----KLPLNEKLTFTPTDKKRMYNTYTRIRMGSTLSRGETIHIA 116

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ S N  A  +A +       F++ MN  +K+LG++ THF+++ G+  H   T +    
Sbjct: 117 LMSSENLAAATLAGNYPGGYNAFIKAMNRKAKSLGMTNTHFVDSSGLDPHNRSTASDVAK 176

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCASGF 226
           ++    K    +      +             Y NTN          +  KTGF   +G 
Sbjct: 177 MVRAAYKYPEIRKYSTTPVHTAYFGKPNYKLGYTNTNALARGKKWTVNVTKTGFLDEAGR 236

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            +        + ++ V+L +  + T    +  +   
Sbjct: 237 CLGMVTTIDGKKILMVMLDSQGKLTPIGDAGRIKQW 272


>gi|326565231|gb|EGE15416.1| D-alanyl-D-alanine endopeptidase [Moraxella catarrhalis 12P80B1]
          Length = 386

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 16/255 (6%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            F ++  + +     + D   G +I     D   + AS++K+MTA V+     + +    
Sbjct: 129 SFYALPISTRSAAVLVYDLQDGKLIYGKNADVQRSIASISKVMTAMVILDAELDMR---E 185

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               I+ +      +++  K G  MT      +++++S N  A A+A +       F+  
Sbjct: 186 EITLIASDLIGAKQASTRLKAGDRMTRSEFTLMMLMRSENPAAKALARTYPGGYDAFIAA 245

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEI 195
           MN  + +LG+  T F ++ G+    + ++A D+ I+         +    ++      + 
Sbjct: 246 MNQKAYDLGMYQTKFSDSSGL-DPHNMSSANDLLIMMKAVNSSPRYHSIRNFSTAPHYDF 304

Query: 196 KGKKY---------PNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILG 245
               Y          NTN  V       G  KTG+   +G+++V      ++  I V+LG
Sbjct: 305 YIANYGSGDRIYKGNNTNRLVREGAYPIGVQKTGYIREAGYSVVMETNINNRPAIVVLLG 364

Query: 246 ALDRNTRNKVSASLL 260
           A +   R   + ++L
Sbjct: 365 ASNSANRWSDAETIL 379


>gi|323529337|ref|YP_004231489.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1001]
 gi|323386339|gb|ADX58429.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           sp. CCGE1001]
          Length = 414

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/244 (22%), Positives = 93/244 (38%), Gaps = 12/244 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-K 84
            +     ++D  T  V+ E   D     AS++KLMTA V           L  P+ ++ +
Sbjct: 170 LRARSVFVVDERTQTVLTEKEADRVMPIASVSKLMTAVVSLDARH----ALDAPLRVTVQ 225

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +      + S    GS ++  + L + ++ S N  A A++         FV  MN  ++ 
Sbjct: 226 DQDFDKFTGSRLSVGSVLSRHDMLHIALMSSENRAAAALSRDYAGGRPGFVAAMNAKARA 285

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKK 199
           LG+  T F+N  G+    + +TARD+A L      + +   +          G       
Sbjct: 286 LGMRRTSFVNGTGL-SPHNVSTARDLARLVAAASRYPLIRAYSTDRDQMVFPGGPRASLS 344

Query: 200 YPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           Y N+N    G        KTGF   +G  +V   +   + +  V+LGA            
Sbjct: 345 YHNSNALVRGGDRSIVLQKTGFINEAGHCVVVRMMVHGRPIDIVVLGAPGPRDHIADVIR 404

Query: 259 LLSM 262
           +   
Sbjct: 405 IRRW 408


>gi|313884857|ref|ZP_07818609.1| serine-type D-Ala-D-Ala carboxypeptidase [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619548|gb|EFR30985.1| serine-type D-Ala-D-Ala carboxypeptidase [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 394

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 120/309 (38%), Gaps = 31/309 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               Y  +D  T  V+A+   + P+  AS++K+++ Y+V+  + E K  +   I+I    
Sbjct: 69  DARSYIAIDQETNRVLAQQEGNKPYPIASMSKIISTYLVYQAIDEGKLSMDQMISIDPAI 128

Query: 87  SEYPPSNSTFK-----KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            +   SN              ++++ L  +++ S ND   A+   +  +E+  V  M++ 
Sbjct: 129 IDNYTSNPNLSNVGLVADQEYSVEDLLNGVLLSSGNDATSALMWQIYGSEEAGVNAMSDL 188

Query: 142 SKNLGLSATHFMNAHGVV---------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
             + G++    ++  G                    +  +A D+A+++  + TDFPQ + 
Sbjct: 189 LHSWGINNFKLVSVSGTPNIELAENIRIPGTGENDENTMSAADIALVAQHLITDFPQVLD 248

Query: 187 YFQIKGLEIK-----GKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                  + K      +   N N           G  G+K+GFT  +G   VA++ +  +
Sbjct: 249 ITNSDSYQFKAGTDYEQTLVNNNLLRAGQEYGRDGITGLKSGFTDGAGRCFVATSTENGR 308

Query: 238 SLIAVILGALDRNTR-NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
            +IAV +G     +     +  LL        D  K   +  +  Q +   +  + S+  
Sbjct: 309 KVIAVTMGTFTDQSNSYWETEILLDELL-KFPDLYKNEALPTNLPQADPKEDEASESDSS 367

Query: 297 CTTQKEIIN 305
            +   +   
Sbjct: 368 ESNSDKKEK 376


>gi|317473054|ref|ZP_07932354.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
 gi|316899483|gb|EFV21497.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
          Length = 302

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 95/243 (39%), Gaps = 11/243 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
               +        L +  +G ++     +    PASLTK+MT  +    +   +  +   
Sbjct: 44  QVSDQKIYSDAAVLAEQKSGRILMNKQGNKKIYPASLTKIMTVLLAVESVSNDEKEILMN 103

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             I ++ ++   S + F  G  + + +     ++ S  +  + +A  L  +E+KF   MN
Sbjct: 104 QDIFQSLAQSHASVAGFLPGERVKIKDLYYGAMLPSGAECCLRLANYLAGSEEKFALLMN 163

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ +G+  T+F+N+ G+    H +TA D+ IL      +      +  ++      +K
Sbjct: 164 QKAREIGMKHTNFVNSTGLHDPKHVSTAEDLEILLRYALKNPRFRKVFETMQYRTEPTQK 223

Query: 200 YP-----------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
           +P             +    T     G KTG+T  +G  + +      +  I V  GA  
Sbjct: 224 HPEGLLLQSTLTDYKDQLKPTNGSFLGGKTGYTKEAGLCLASWVNIRGKRYILVTAGARG 283

Query: 249 RNT 251
            + 
Sbjct: 284 DHQ 286


>gi|167900376|ref|ZP_02487777.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 7894]
 gi|167924801|ref|ZP_02511892.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei BCC215]
          Length = 378

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 122 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIEKNANRVMPIASVTKLMTSMVALDTRAP 181

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 182 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 237

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 238 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 296

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 297 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 356

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 357 PGPHDHVADAAKIRRW 372


>gi|299144553|ref|ZP_07037632.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298517641|gb|EFI41381.1| serine-type D-Ala-D-Ala carboxypeptidase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 290

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 22/280 (7%)

Query: 3   QFLVIIAMAMLSNIFPFLS---IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            FL++I ++    +  F +              ++D +   +I E   +     ASLTKL
Sbjct: 10  IFLMVIVISAGLTLLYFCNNKLAKIDYNSKAICVMDADKNKIIFEKNANEKLKIASLTKL 69

Query: 60  MTAYVVFSFL-KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           MT  V        ++       +  KN      S   F     + + + L   ++ S  +
Sbjct: 70  MTVLVAIEKNLDWEEISPVDVES-YKNMVASNASMVGFYGRERVKVKDLLYGTMLASGGE 128

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+++A     + + FV  MN  +K LGL  T+F N  G+ +  +Y+TARDMA+L     
Sbjct: 129 AAMSLAIKSSGSLENFVIDMNEKAKELGLKETNFSNPVGMDEENNYSTARDMALLLNEAI 188

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNW-----------AVGTFLGADGMKTGFTCASGFN 227
            +      +        +   +PN                 T     G K+G T  +G  
Sbjct: 189 KNEEFKKIFTAKNYTTTETLDHPNGINIESTVLKEISDEDKTDFKILGGKSGTTKEAGLC 248

Query: 228 IVASAIQGDQSLIAVILGALDRNTRN------KVSASLLS 261
               + +G+++ I V++GA     RN      + +  +L 
Sbjct: 249 WATLSKKGEKNYIIVVIGAPLDELRNPTMLQKEDTIKILE 288


>gi|325263833|ref|ZP_08130566.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
 gi|324030871|gb|EGB92153.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. D5]
          Length = 425

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/294 (20%), Positives = 119/294 (40%), Gaps = 34/294 (11%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            +++ NTGHV+ +  P   W PAS++KLMT  + +  ++E +  L T + ++    +   
Sbjct: 29  IIVEINTGHVLWQENPQISWEPASMSKLMTILLAYDAIQEGEFSLDTQVPVTDKYLDIAG 88

Query: 92  S----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                N+    G++ T+   + L+IV S+      +A+ +     KFV  +N  + +LG+
Sbjct: 89  RYSLSNNKMLAGASYTVAELIDLIIVPSSAAATYMLADLIEPDPDKFVTLLNERASSLGM 148

Query: 148 SATHFMNAHGVVQ--------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
             T + N  GV                  + TT  D A+L       +P  +++ +   +
Sbjct: 149 KNTRYYNPVGVPNELLVPYQPVNASLTDVNVTTPEDYALLCCYFVKTYPDILNHTKHPKI 208

Query: 194 EIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            IK        +    +          G DG+KTG       N  ++A++G+  L+ +++
Sbjct: 209 VIKEGTPYEEKFDTYQYSLEGAKYSLKGTDGLKTGSNQNGF-NYSSTALRGNTRLVEIVM 267

Query: 245 G-ALDRNTRNKVSASL-----LSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
           G +   +   +    L     +   F N   RK +   I     + +  +    
Sbjct: 268 GVSKWEDQAGEEMRHLIGNAIMEQAFQNFEYRKVLEKGIHTINNKKIEVKKDLW 321


>gi|167745400|ref|ZP_02417527.1| hypothetical protein ANACAC_00091 [Anaerostipes caccae DSM 14662]
 gi|167655121|gb|EDR99250.1| hypothetical protein ANACAC_00091 [Anaerostipes caccae DSM 14662]
          Length = 302

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 95/243 (39%), Gaps = 11/243 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
               +        L +  +G ++     +    PASLTK+MT  +    +   +  +   
Sbjct: 44  QVSDQKIYSDAAVLAEQKSGRILMNKQGNKKIYPASLTKIMTVLLAVESVSNDEKEILMN 103

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             I ++ ++   S + F  G  + + +     ++ S  +  + +A  L  +E+KF   MN
Sbjct: 104 QDIFQSLAQSHASVAGFLPGERVKIKDLYYGAMLPSGAECCLRLANYLAGSEEKFALLMN 163

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
             ++ +G+  T+F+N+ G+    H +TA D+ IL      +      +  ++      +K
Sbjct: 164 QKAREIGMKHTNFVNSTGLHDPKHVSTAEDLEILLRYALKNPRFRKVFETMQYRTEPTQK 223

Query: 200 YP-----------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
           +P             +    T     G KTG+T  +G  + +      +  I V  GA  
Sbjct: 224 HPEGLLLQSTLTDYKDQLKPTNGSFLGGKTGYTKEAGLCLASWVNIRGKRYILVTAGARG 283

Query: 249 RNT 251
            + 
Sbjct: 284 DHQ 286


>gi|153811304|ref|ZP_01963972.1| hypothetical protein RUMOBE_01696 [Ruminococcus obeum ATCC 29174]
 gi|149832431|gb|EDM87515.1| hypothetical protein RUMOBE_01696 [Ruminococcus obeum ATCC 29174]
          Length = 334

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 24/253 (9%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     LLD     V+          PAS+TK++TA + F         +   +TI++  
Sbjct: 83  QAQKGVLLDLKDKSVLYAKGAYDKVYPASITKIITALLAFKNS-----NMDDVVTITQEN 137

Query: 87  SE--YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                      F+ G  +T+D  +  L+V S ND A AIA  +  + + FV  MN  +  
Sbjct: 138 ITLEEGSQVVGFQVGDQVTMDQLVHCLLVYSGNDAASAIATHVGGSTENFVAMMNEYAAQ 197

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK------ 198
           LG + THF N HG+    HYTT  D+ ++       +P++    Q+    +  +      
Sbjct: 198 LGCTGTHFTNPHGLQDENHYTTPYDIYLMLKEAL-KYPEFTEITQLPSYTVTFQHSDGSE 256

Query: 199 ---------KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALD 248
                     Y          +   G KTG T ++G  +         +  +++++GA  
Sbjct: 257 DSVSLTATDHYLTGEANAPKGVTVLGGKTGTTSSAGNCLALLCQNSYGEPYVSIVMGAST 316

Query: 249 RNTRNKVSASLLS 261
           +    +   SLL 
Sbjct: 317 KELLYQQMTSLLE 329


>gi|296113230|ref|YP_003627168.1| D-alanyl-D-alanine carboxypeptidase [Moraxella catarrhalis RH4]
 gi|295920924|gb|ADG61275.1| D-alanyl-D-alanine carboxypeptidase [Moraxella catarrhalis RH4]
          Length = 386

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 104/255 (40%), Gaps = 16/255 (6%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
            F ++  + +     + D   G +I     D   + AS++K+MTA V+     + +    
Sbjct: 129 SFYALPISTRSAAVLVYDLQDGKLIYGKNADVQRSIASISKVMTAMVILDAELDMR---E 185

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
               I+ +      +++  K G  MT      +++++S N  A A+A +       F+  
Sbjct: 186 EITLIASDLIGAKQASTRLKAGDRMTRSEFTLMMLMRSENPAAKALARTYPGGYDAFIVA 245

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEI 195
           MN  + +LG+  T F ++ G+    + ++A D+ I+         +    ++      + 
Sbjct: 246 MNQKAYDLGMYQTKFSDSSGL-DPRNMSSANDLLIMMKAVNSSPRYHSIRNFSTAPHYDF 304

Query: 196 KGKKY---------PNTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILG 245
               Y          NTN  V       G  KTG+   +G+++V      ++  I V+LG
Sbjct: 305 YIANYGSGDRIYKGNNTNRLVREGAYPIGVQKTGYIREAGYSVVMETNINNRPAIVVLLG 364

Query: 246 ALDRNTRNKVSASLL 260
           A +   R   + ++L
Sbjct: 365 ASNSANRWSDAETIL 379


>gi|299538496|ref|ZP_07051779.1| D-alanyl-D-alanine carboxypeptidase [Lysinibacillus fusiformis ZC1]
 gi|298726083|gb|EFI66675.1| D-alanyl-D-alanine carboxypeptidase [Lysinibacillus fusiformis ZC1]
          Length = 305

 Score =  106 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 11/233 (4%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                L++ +   ++ +   +    PASLTK+MT  V    +   +  +  P  I ++  
Sbjct: 55  SSNAILVNLDENQIVLDKKSEEKIYPASLTKMMTVLVAIEQISNLQEEIILPKHIFRDLL 114

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           E   S + F     +T+++ L   ++ S  + ++ +AE +  +E+ FV+ MN  ++ LG+
Sbjct: 115 EENASVAGFLPNEKVTVEDLLYGSMLPSGAEASLGLAEYVAGSERGFVKLMNEKAQQLGM 174

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG-----------LEIK 196
             THF+N  G+    HYTT +DM++L     T+      Y   +            +   
Sbjct: 175 KNTHFVNTTGLHHSDHYTTVKDMSLLLQYALTNDDFRNVYTAERYSIKSTNLHPEGITFT 234

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            + + +   +        G KTG+T  +G  + + A+   Q  + V +GA   
Sbjct: 235 SRMFQHMTSSALPGGEILGGKTGYTEDAGLCLASLALINGQEYVLVTVGADGS 287


>gi|260899160|ref|ZP_05907555.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AQ4037]
 gi|308110607|gb|EFO48147.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
           parahaemolyticus AQ4037]
          Length = 181

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 6   VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           V ++     + F     +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15  VALSATFAQSAFASPVVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63  YVVFSFLKEKKAMLTTPITISKNAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           YV+   L          +TISKNA        S    + G+T+ + +  + +I++S ND 
Sbjct: 75  YVIGQELARGNISEDDDVTISKNAWAKNFPDSSKMFIEVGTTVKVRDLNRGIIIQSGNDA 134

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            VA+AE +  +E  FV  MN  +  LG+  +HF N HG+     Y+T
Sbjct: 135 CVAMAEHIAGSEDAFVDLMNAWANTLGMKNSHFANVHGLDNSELYST 181


>gi|331086263|ref|ZP_08335343.1| hypothetical protein HMPREF0987_01646 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406029|gb|EGG85552.1| hypothetical protein HMPREF0987_01646 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 445

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 59/338 (17%), Positives = 127/338 (37%), Gaps = 38/338 (11%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + + +TG ++ E   D  W PAS+TKLMT  + +  ++E K      + +++  ++   
Sbjct: 62  IITEIHTGQILWEENKDVSWAPASMTKLMTILLAYDAMEEGKFEKDMQVAVNEKYTDIAG 121

Query: 92  SNSTFKKGSTMTLDNA----LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
             +       M         + L+IV S+      +A+ +     KFV  MN  +K +G+
Sbjct: 122 RYALSNNVMQMGATYTVGELIDLIIVPSSAAATYMLADLVEPDPDKFVALMNQKAKEIGM 181

Query: 148 SATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           + T + N  GV                  + T+ +D A+L       +P  + +     +
Sbjct: 182 THTTYYNCVGVTNDLLYPYAPKNLPADADNVTSPQDYALLCSYFVKTYPDILTHTSSPEI 241

Query: 194 EIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            +K       ++               G DG+KTG +  +GFN  ++A + D  L+ +++
Sbjct: 242 VVKEGTPYEEHFKSYQISLEGAKYGLKGTDGLKTGSSGRAGFNYSSTAKRQDTRLVEIVM 301

Query: 245 GALD------RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           G  D         R+ V  +++   F     RK +        ++ +        +++  
Sbjct: 302 GVSDWTDQTGEELRHLVGNAIMEQAFEKYEYRKVLPKGTHQIGKEKIV-----TKKDLWD 356

Query: 299 TQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
              +      +M++ K        +       +   ++
Sbjct: 357 CVPKEEKIKFKMEDGKVFVDLERQYLPGYAAPSVTYQQ 394


>gi|295107786|emb|CBL21739.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus obeum A2-162]
          Length = 307

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 11/235 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
              PY  L+    G VI E   +    PAS+TK+MT  V    LK+    +T    + + 
Sbjct: 48  INSPYAVLMQVRGGRVIGEINGEEQMYPASMTKIMTTIVAIENLKDLDQEITLTNEMFEG 107

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             E   + + F+ G T+   + L  +++ S  +  +A+A+++  +E  FV  MN  +  L
Sbjct: 108 LYEQDATQAGFQPGETVRAIDLLYGVMLPSGAECCIALADTIAGSEADFVTLMNEKAAKL 167

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL-----------E 194
           G++ T+F +  G+    HY+T +D+A+L      D                         
Sbjct: 168 GMTGTNFCDTTGLHDANHYSTVKDIAVLLKYALKDDTFREIIESPYYSTPGTNIHPDGIT 227

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                + N +    T     G KTG+T  +G  + + A       I V  GA   
Sbjct: 228 FYSTMFKNLSDTAVTDGKIMGGKTGYTGEAGHCLASFAEIDGTEYILVTGGASGT 282


>gi|134094725|ref|YP_001099800.1| D-alanyl-D-alanine-endopeptidase [Herminiimonas arsenicoxydans]
 gi|133738628|emb|CAL61673.1| putative Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Herminiimonas arsenicoxydans]
          Length = 274

 Score =  106 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 92/236 (38%), Gaps = 8/236 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
             +  ++D  TG ++ E         ASLTKLMTA +V       +  +   I I+ +  
Sbjct: 24  SKHAIVIDEATGKILFEKNSSDIVPIASLTKLMTAMLVLDA----RLDMHEHIMITDDDV 79

Query: 88  EYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    +S+     S +T +  L+L ++ S N  A A+A +     + F     N +  L 
Sbjct: 80  DTLKFSSSRVPVGSMLTRNTLLELALMSSDNRAAHALARTYPGGIEHFRLAARNKAHALS 139

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG--KKYPNTN 204
           L  T+     G+  +   T +    +     +    + +       +++    + Y NTN
Sbjct: 140 LRRTNIEEPTGLSPYNTSTASDLARLAMAAARYPEIERITTSAGDLIDLGSSARHYHNTN 199

Query: 205 WAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             VG         KTG+T  +G  I+       +  I V+L A     R   + SL
Sbjct: 200 KLVGDKNWTISLSKTGYTQEAGRCIIMRVRTAGRDAIMVLLNARASANRTADAVSL 255


>gi|258513818|ref|YP_003190040.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257777523|gb|ACV61417.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 373

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 11/243 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                      P   L++     ++ +   +    PASLTK+MTA V    L + K  +T
Sbjct: 79  SVSISPGELNSPNAILINLKDHTILMQKNSEEKIYPASLTKMMTAIVAIENLPDLKKEIT 138

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
              ++ +  SE   S + F+ G  +   + L   ++ S  +  V +A+ +  +EK FV  
Sbjct: 139 LTDSVFRGLSEADASMAGFRPGENVRAIDLLYGALLPSGAESCVELADYIAGSEKDFVGM 198

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN  + +LG+  T+F N+ G+    HYTT +D+A+L      +      +   +      
Sbjct: 199 MNQKAADLGMYNTYFENSTGLQNENHYTTVKDLAVLLSYALQNDTFREIFTSTRHSTPPT 258

Query: 198 KKYPNT-----------NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            K+P+            N    T     G KTG+T  +G  + + A  G Q    +  GA
Sbjct: 259 NKHPDGITFYSTMFDELNNRSITDGKILGGKTGYTAEAGLCLASLAQVGKQEYSLISAGA 318

Query: 247 LDR 249
              
Sbjct: 319 KGD 321


>gi|221632462|ref|YP_002521683.1| beta-lactamase [Thermomicrobium roseum DSM 5159]
 gi|221156002|gb|ACM05129.1| beta-lactamase [Thermomicrobium roseum DSM 5159]
          Length = 364

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 68/315 (21%), Positives = 116/315 (36%), Gaps = 25/315 (7%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
           +     +   T        +D   G  +     D P  PAS TKLMTA VV      +  
Sbjct: 30  SSAYQPAERPTLTARASFAVDITAGVELWAQEADRPLPPASTTKLMTALVV-----RRWL 84

Query: 75  MLTTPITISKNA--SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE------- 125
                ITI  +        +N+ F+ G  +T+ + L  +++ SA D A+A+A        
Sbjct: 85  RPDESITIRSDDLVDPAVYANAGFQPGDRVTVTDLLAAMLIASAGDAALALARVAGERID 144

Query: 126 -SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--- 181
                    F+  MN  +  LGL  + F    G    G   +ARD+AI++  + +D    
Sbjct: 145 PEHDVPRTAFIDAMNQEAARLGLRHSWFATPDGRDVPGQTVSARDLAIIAAAVLSDPLLA 204

Query: 182 ---PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
                     +I G + +     NTN  +     A G+KTG + A+G  +VA+  +G+  
Sbjct: 205 ELVATRTREIEIAGPQSRRITVVNTNQFLTE-PDALGVKTGTSVAAGQCLVAAVRRGNDI 263

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           ++ V+L       R   + +LL+                 +  +      VP +   V  
Sbjct: 264 VVLVLL---SSRDRYADARALLTYLDRQYRWFTLDGRSFAELARLAREGIVPALVPTVVV 320

Query: 299 TQKEIINYNTQMKEA 313
             +        +   
Sbjct: 321 ANETADQVRVIIDRQ 335


>gi|160880498|ref|YP_001559466.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
 gi|160429164|gb|ABX42727.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           phytofermentans ISDg]
          Length = 342

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 19/254 (7%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D     V+          PAS TKL+TA +V    K      +  I   
Sbjct: 90  PAIPAIAAFMIDDTDHQVLFAKNVYDRIYPASTTKLLTALIVL---KYGDLKDSVTIEKD 146

Query: 84  KNASEYPPSN-STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                   +    FK G  ++++  L  L+V S ND AVAIAE +  + ++FV+ MN  +
Sbjct: 147 NAGVTTYGAKLCNFKAGDVVSMETLLNCLLVYSGNDAAVAIAEHMYGSVEEFVKKMNEEA 206

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI--------KTDFPQYMHYFQIKGLE 194
            N+G + THF N HG+    HYTTA DM ++                  Y      K  +
Sbjct: 207 ANIGATNTHFTNPHGLHDPNHYTTAYDMYLIFKECLKYEKFVPIIKQINYEASITDKDGK 266

Query: 195 IKGKKYPNTNWAVGTFL------GADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGAL 247
           ++ K Y  TN  +             G KTG T  +G  ++  +     ++ I+ +  A 
Sbjct: 267 LRRKSYETTNMFLLGTKETPEGVTVFGGKTGSTGDAGDCLILYSNSADGKAYISAVFKAA 326

Query: 248 DRNTRNKVSASLLS 261
            + +     A LL 
Sbjct: 327 GKTSLYNQHAHLLE 340


>gi|320528533|ref|ZP_08029690.1| serine-type D-Ala-D-Ala carboxypeptidase [Solobacterium moorei
           F0204]
 gi|320131119|gb|EFW23692.1| serine-type D-Ala-D-Ala carboxypeptidase [Solobacterium moorei
           F0204]
          Length = 398

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 75/354 (21%), Positives = 136/354 (38%), Gaps = 33/354 (9%)

Query: 1   MRQFLVIIA-------MAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAENYP 47
           M++ L  +        +  L+ + P  +   T           Y  LD +TG V++    
Sbjct: 1   MKKLLTKLFTTITCTLVIALTTLLPVTAADATFDLGKNLYSTNYIFLDADTGQVLSAKKQ 60

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D   + ASLTK+MT  +           +T    +     +   S + +  G T TL + 
Sbjct: 61  DEQISIASLTKMMTVLLAIENSSSLNQTVTITDEMIDGLYDEQASVAGYINGDTATLLDL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
                V SA D A A+A  +  + +KF Q MN+ +  LG+  T F +AHG+ + G Y+T 
Sbjct: 121 CYAAAVPSAADAANALAIQIGGSFEKFYQMMNDKAAQLGMDHTVFKSAHGLDRDGQYSTV 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD------------G 215
            D++ L      + P +   F  K    +   Y      + + + A             G
Sbjct: 181 EDISKLLRYALQN-PTFKEIFSTKEYTTQATAYYPFGIPLASTIWAYADTYGYNLTNLSG 239

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN---KVSASLLS--MGFYNKTDR 270
            KTG+T  +G  I   A   D ++IAV  GA     +      + ++L+    +  KT  
Sbjct: 240 GKTGYTLQAGRCIAYWATVNDMTIIAVTAGASTNVEQYSNLSDAQTVLTSLASWQKKTIL 299

Query: 271 KKINYIIKDFYQQNLSNEVPNIS--EEVCTTQKEIINYNTQMKEAKDKESHFID 322
           K  + +    Y+  +     ++   +++       +    ++   K   +   D
Sbjct: 300 KSNDVVSTIEYKSFMHTANIDVKMDKDITLDLPANVECTYEVDLPKKFSAELYD 353


>gi|194336246|ref|YP_002018040.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308723|gb|ACF43423.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 390

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 21/276 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY------YTLLDTNTGHVIAENYPDHPWNPASLT 57
           F+V   +A+       L+    + L        Y + +      +     +   +PASLT
Sbjct: 35  FVVFFVIAVTITPLFLLAQTGDDSLRSPFPINSYIVKERGGSKFLMAKDIEKSVSPASLT 94

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K++T  +     +     L   + I+K ++   PS + FK G  + L + +K  +V S+N
Sbjct: 95  KILTCIMAIESGR-----LEEDVLITKESTLVEPSKAGFKPGEKIRLIDLVKAAMVNSSN 149

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH---GHYTTARDMAILS 174
           D A AIA  L    + FV  MN  ++ +G+  + F N  G  +    G+ +TA D+  L+
Sbjct: 150 DAAFAIAIHLSGDVESFVAAMNYRAQRIGMRNSRFTNPAGFDKALYAGNSSTAEDLLHLT 209

Query: 175 WRIKTDFPQYM-----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +               +    K       N  +  +  A G+KTG+T  +G  ++
Sbjct: 210 EYAVKNPVFNQIARLEQVVFTEQTTRKVYSLKTHNKLLDKYPYAVGIKTGYTSTAGRCLI 269

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           A AI+ ++ ++ V+L A     R  ++A +    F 
Sbjct: 270 ARAIKDNRDILLVMLNAKT--DRWTIAADIFDSVFA 303


>gi|312867918|ref|ZP_07728122.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis F0405]
 gi|311096322|gb|EFQ54562.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis F0405]
          Length = 437

 Score =  106 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 77/337 (22%), Positives = 135/337 (40%), Gaps = 36/337 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           K     ++D NTG ++  +  D   +  S+ KLM+AYVVF  LKE K    T IT ++  
Sbjct: 58  KPKADIVIDANTGAILYGDNIDTVRDSGSMAKLMSAYVVFRALKEGKIKYDTVITATEAD 117

Query: 87  SEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNT 141
                +    NS    G    +   +K+L V S++   + +A +       KF+  MN  
Sbjct: 118 QAISENNLLSNSPIVAGVDYKVSELIKMLFVPSSSAAVIMLANAVTDNDPDKFLDLMNQY 177

Query: 142 SKNLGLSATHFMNAHGVV---------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
           ++ +G+S T + N +G +                  +  TARDM+IL++ I  D P+ + 
Sbjct: 178 AQEMGMSHTKWHNPNGAMISVLQGYYNPQRYDVNANNEITARDMSILAYHIVNDLPEMLE 237

Query: 187 YFQIKGLEIKGKK-----YPNTNWAVGTF----LGADGMKTGFTCASGFNIVASAIQGDQ 237
           Y +     I         Y N N ++        G DG+KTG +  + +N  A+  +G Q
Sbjct: 238 YTKQAHTTIMEGTPYEQSYDNYNTSLEGGKFALKGTDGLKTGSSPTADYNYTATTKRGKQ 297

Query: 238 SLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            +I VILG  + +       RN++  +L    F +   +K ++            +   +
Sbjct: 298 RIIEVILGVGNYDVEIAESYRNQIGNTLAEKMFADYQYKKILSAGD-HTIDGKTIHLKQD 356

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               V    K  +         ++         K  +
Sbjct: 357 FYATVKKGTKPALKLEDNRLVVQNGLQQVSPSIKPGV 393


>gi|169334052|ref|ZP_02861245.1| hypothetical protein ANASTE_00445 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258769|gb|EDS72735.1| hypothetical protein ANASTE_00445 [Anaerofustis stercorihominis DSM
           17244]
          Length = 505

 Score =  106 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 67/345 (19%), Positives = 119/345 (34%), Gaps = 26/345 (7%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYT---LLDTNTGHVIAENYPDHPWNPASLTKLMT 61
            +I+ + +L+      + A            L + +T   +  +  +    PAS TK+MT
Sbjct: 14  FLIVVVLLLNITSNIYAAAPKVSKDSSLGLYLYEDSTKSELYSHNGNKKMYPASTTKIMT 73

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A +   ++K              N      S ++  K  T++  + L  L++ S ND A+
Sbjct: 74  AALTLEYIK--DLNKKVTTGSELNRLPAGSSTASLYKNETLSYKDLLYGLMLPSGNDAAI 131

Query: 122 AIAESLCKTEKK------------FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            +A ++ K   K            FV+ MN  +K +G++ THF N HG     HY+T  D
Sbjct: 132 VLACNVGKVISKDKNISKDKAYSVFVKEMNKKAKEIGMTKTHFNNPHGFHDKNHYSTPHD 191

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV--------GTFLGADGMKTGFT 221
           MA+L+                       K     +             +  A G KTG+T
Sbjct: 192 MAVLAAYADDFSYYNRVVDSTYYETTTNKTTHRWSGHNALILRGSKYFYKPAKGDKTGYT 251

Query: 222 CASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
             +G  +V S+         AV+L +     +  ++  LL  G    +           +
Sbjct: 252 GEAGRCVVGSSENDEGIRYYAVVLHSPTTAQQFGLARDLLKYGNEETSKLTIEEEGDTLY 311

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
                +  +           K+I  Y  +     +    F    K
Sbjct: 312 KYTVRNLALGEQGAFKVKVNKDIEVYADKNYTEDNFTISFEPSSK 356


>gi|296138681|ref|YP_003645924.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Tsukamurella
           paurometabola DSM 20162]
 gi|296026815|gb|ADG77585.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Tsukamurella
           paurometabola DSM 20162]
          Length = 432

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 95/281 (33%), Gaps = 37/281 (13%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L        + +      + + D  +G V+A   P   + PAS  KL+ A V        
Sbjct: 92  LVVPDGAPPVPQGIDSAGWLVADLTSGTVVAAKDPHGRYRPASTIKLLLAQVALRE---- 147

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L T ++ +   +      +    G   T+   L+ L++ S ND A A+A  L   + 
Sbjct: 148 -LNLDTVVSGTAEDAAQEGDAAGVAPGGRYTVRQLLEGLLLISGNDTAHALARQLGGVDT 206

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
              + MN+ +K+LG   T  +   G+   G  T+  D+A++      D  ++      + 
Sbjct: 207 AVAK-MNDLAKSLGAKDTRAITPSGLDGPGQTTSPYDLALILQNALRD-KRFTDIASTRQ 264

Query: 193 LEIK----------------------------GKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +                                    N N  +    GA   K G+T  +
Sbjct: 265 ITFPGHPPVPTTGPATPLPPGGTPPPAPTSVAPYPIINENRMLTDVPGAVAGKNGYTDDA 324

Query: 225 GFNIVASAIQGDQSLIAV-ILG-ALDRNTRNKVSASLLSMG 263
               V +  +  +  + V + G A   NT       LL  G
Sbjct: 325 KKTYVGAVDRDGKRYVVVQLFGLAYTGNTYWDQFRRLLDYG 365


>gi|260438393|ref|ZP_05792209.1| D-alanyl-D-alanine carboxypeptidase [Butyrivibrio crossotus DSM
           2876]
 gi|292808979|gb|EFF68184.1| D-alanyl-D-alanine carboxypeptidase [Butyrivibrio crossotus DSM
           2876]
          Length = 345

 Score =  105 bits (262), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 23/271 (8%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +A++         ++        L+D NTG V+ +  P     PAS TK++T+ +   + 
Sbjct: 66  IAVVGADAVNSPGSDKITSDAALLVDVNTGEVLFQKNPHKKEYPASTTKILTSLIAIKYG 125

Query: 70  KEKKA-MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
                  +   + I++N             G  +  D A+   ++KS ND A  +A    
Sbjct: 126 DANSVRKVGDEVIINENNVVMCDFRQ----GDLIPFDIAIHGALMKSGNDAAAVLALFAA 181

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT--DFPQYMH 186
                 V  MN  +K+LG + ++F+N HG+    HYTT  D+ ++         F   + 
Sbjct: 182 DNMSDAVALMNKEAKSLGATESNFVNPHGLYNDNHYTTVYDLYLIFNEAIKYSKFVDTLS 241

Query: 187 YFQIKGLEIKG---------KKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVAS 231
             +  G   +            Y N+N      +A    +   G K G+T  +  + V  
Sbjct: 242 CMKYTGSFTRKTAYGDYSIGCSYTNSNGFLTGSYATPDGIKVYGGKAGYTEVARRSYVML 301

Query: 232 AI-QGDQSLIAVILGALDRNTRNKVSASLLS 261
           A        I + + A   +   K  ++LL+
Sbjct: 302 AESNNGHKYIIITMRAESNSLMYKDLSALLN 332


>gi|254298329|ref|ZP_04965781.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 406e]
 gi|157808378|gb|EDO85548.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 406e]
          Length = 454

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 96/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 198 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 257

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 258 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 313

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+   HF+NA G+    + +TARD++ L                 
Sbjct: 314 RPAFVAAMNRKARTLGMKRMHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 372

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 373 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 432

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 433 PGPHDHVADAAKIRRW 448


>gi|170706123|ref|ZP_02896585.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
 gi|170129125|gb|EDS97990.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0389]
          Length = 285

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 44/261 (16%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PA                     
Sbjct: 53  VVPPKYIPPEVDAKAAVIIDASNGDIIYQHNENEAFAPA--------------------- 91

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                      ++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 92  -----------AQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 140

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 141 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 200

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 201 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 260

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L++  F
Sbjct: 261 MGTKGKTKRFTETNKLMTYAF 281


>gi|328954968|ref|YP_004372301.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Coriobacterium
           glomerans PW2]
 gi|328455292|gb|AEB06486.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Coriobacterium
           glomerans PW2]
          Length = 452

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 69/315 (21%), Positives = 125/315 (39%), Gaps = 48/315 (15%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA-----------------------ETNKLPYYTLLDTNT 38
           R  +VI A+  L    P  + A                          +  +  ++    
Sbjct: 19  RLLIVICAVLALIVCMPARAHAETRADDLVCGESIAQRGLKQRNRPDIQAGHAIVM-GRD 77

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G    E   D     AS+TK+MTA V  S  K+     +  I + + A+    +++  ++
Sbjct: 78  GICYFERDADAQVKIASITKVMTALVALSHGKK-----SETIAVDRAAATVGEASAHLRE 132

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--------KFVQHMNNTSKNLGLSAT 150
           G  ++L++AL+ L++ S ND A+AIA ++              FV  MN  +K LG + T
Sbjct: 133 GDALSLEDALRCLLIPSGNDAALAIATAIGSEIDPTSSDPDGVFVNAMNEKAKQLGCTGT 192

Query: 151 HFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQY------MHYFQIKGLEIKGKKY 200
           +F N HG+         ++TARD+AI+      D               ++  +   +  
Sbjct: 193 NFTNPHGLDMDPWAGDMHSTARDVAIMVAAAMRDDTFRSIVGTGAARVTVRSADGASRTL 252

Query: 201 PNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             ++        G  G+KTG T  +G+    +  +    +  V+LGA     R   SASL
Sbjct: 253 ELSDVNQMLNAQGNIGVKTGTTDEAGYCFAGAFSRDGNEVYTVVLGANTSQQRFDDSASL 312

Query: 260 LSMGFYNKTDRKKIN 274
            +  + +   +  ++
Sbjct: 313 ATWYYAHAKRKPAVS 327


>gi|296120094|ref|ZP_06838648.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967248|gb|EFG80519.1| serine-type D-Ala-D-Ala carboxypeptidase [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 480

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 101/248 (40%), Gaps = 13/248 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +   + + D ++G ++A   P   + PAS+ K++ A V           L   +T + 
Sbjct: 155 DVRASAWIVSDLDSGEIVAMKDPHGRYRPASILKVLLAMVAIDE-----LDLKKVVTGTD 209

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +    S      G   T++  L+ L++ S ND A A+A+ L   E+   + +N  +++
Sbjct: 210 EDAAIDGSAVGIGPGGHYTVEQLLQGLLMASGNDAAHALAQQLGGDEETLTK-INQLAQD 268

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-----GLEIKGKK 199
           LG  +T   +  G+   G  T+A DMA+L      +                  +++G +
Sbjct: 269 LGARSTFAASYSGLDAPGMSTSASDMALLYTEAFKNPTFARMVGTDTAEFPGYGDLEGYE 328

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-DRNTR-NKVSA 257
             N N          G KTG+T  +    V +  +  + L+AVIL    D   R  + + 
Sbjct: 329 LGNDNGLFMNDPDGIGGKTGYTDDANHTFVGALDRDGRRLMAVILDTTIDHGPRAWEQAQ 388

Query: 258 SLLSMGFY 265
            LL   + 
Sbjct: 389 MLLDEAYD 396


>gi|56962947|ref|YP_174674.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
 gi|56909186|dbj|BAD63713.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
          Length = 304

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 15/247 (6%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
            PY  +++  TG V+ E   +    PASLTK+MT  V    +++  A+    +T      
Sbjct: 48  SPYIYVMERETGRVVYEENAEAKVYPASLTKIMTTIVALEQIEDLSAIAPVDVTTYHEMV 107

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S + F     +T  + L   ++ S  + A ++A  +    + FVQ MN+ +  LGL
Sbjct: 108 ASNASMAGFFGREDVTYRDLLYGTMLTSGGEAANSLAVHVGGNVENFVQMMNDKAAELGL 167

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT---- 203
           + THF N  G+     YTTA D+A L      +      +           ++P+     
Sbjct: 168 NGTHFTNPEGLHNEKQYTTASDIAKLLDYALNNSDFKTIFTTKMFQTTPTAEHPDGLLLQ 227

Query: 204 -------NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTR 252
                  +          G K+G T  +G       +  D   I +++GA         R
Sbjct: 228 STVLTFLHKKEQDRFDILGGKSGTTYEAGQCWATLGLVEDTEYITIVMGAPLKDISHPDR 287

Query: 253 NKVSASL 259
            +++ +L
Sbjct: 288 AQIADTL 294


>gi|229829069|ref|ZP_04455138.1| hypothetical protein GCWU000342_01154 [Shuttleworthia satelles DSM
           14600]
 gi|229792232|gb|EEP28346.1| hypothetical protein GCWU000342_01154 [Shuttleworthia satelles DSM
           14600]
          Length = 334

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 25/254 (9%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               +++  +GHV+     +    PAS+TK++T        +     L+  +T+S+NA  
Sbjct: 84  QSALVINETSGHVLYSKQANRKAYPASMTKVLTFLTAMRCGQ-----LSDTLTVSENALR 138

Query: 89  YPPSNSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
               ++    + G  ++L  AL  +I+ S ND A+ IAE L  + + F + MN T+ ++G
Sbjct: 139 VMEGSTMAGLRAGDQISLQEALYAMILPSGNDAAITIAEGLGGSTEHFAEEMNETAASIG 198

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---------KG 197
            + TH++  +G+    HYTTA DM ++       +P +      K             + 
Sbjct: 199 ATHTHYVTVNGLHDDNHYTTANDMYLIFHEAL-KYPIFRDIISSKTHTGSFQSSGGLKRT 257

Query: 198 KKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRN 250
             + NTN          + +   G KTG T  +G  +V  +     + +I++I  A +  
Sbjct: 258 LTWKNTNRYLQGSIQSPSDMTVVGGKTGTTDQAGACLVLLSKNARGEEIISIIFKADNHA 317

Query: 251 TRNKVSASLLS-MG 263
              K    LL   G
Sbjct: 318 ALYKQMNHLLEVYG 331


>gi|270289644|ref|ZP_06195946.1| D-alanyl-D-alanine carboxypeptidase, putative [Chlamydia muridarum
           Weiss]
          Length = 398

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 120/324 (37%), Gaps = 41/324 (12%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEKKAMLTTPITISKNASE 88
           +  ++G ++ E   D    PAS+TK+ TA ++         +          +I+  A +
Sbjct: 1   MHADSGAILKEKNLDQKIFPASMTKIATALLILRKHPDVLTRFITIRREPLTSITPQAKQ 60

Query: 89  YPPSNSTFKK------------GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                S                   ++  +    L++ SAND A  +A++ C++   F+ 
Sbjct: 61  QSGYRSPPHWLETDGVAIQLKSKEEVSGWDLFHALLISSANDAANVLADACCQSVPAFMH 120

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-----TDFPQYMHYFQIK 191
            +N+  K +G   THF + HG+    HYTTARD+AI+              +   Y    
Sbjct: 121 QLNDFLKEIGCQNTHFNSPHGLHHPDHYTTARDLAIIMKEALKEPLFCQVIRTASYTMES 180

Query: 192 GLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 +   +TN      +   +    G KTG T ++G NIV +A + ++S+I V  G 
Sbjct: 181 TNLSPERTLSSTNRLLSSSSTYFYPPCLGGKTGTTKSAGKNIVFAAEKNNRSIIVVAAGY 240

Query: 247 LDR-NTRNKVSAS----LLS----MGF-----YNKTDRKKINYIIKDFYQQNLSNEVPNI 292
                   + + +    L +      F        + + K   I     Q    +  P+ 
Sbjct: 241 FGPAAQLYQDAIAVCEDLFNEQLLRCFLLPPASQYSVKTKFGPITAPVSQGIYYDFYPSE 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDK 316
            + + +   E       +++    
Sbjct: 301 GDPLLSLSLESSKIAFPIRQGDLL 324


>gi|270285635|ref|ZP_06195029.1| D-alanyl-D-alanine carboxypeptidase, putative [Chlamydia muridarum
           Nigg]
          Length = 414

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 120/324 (37%), Gaps = 41/324 (12%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEKKAMLTTPITISKNASE 88
           +  ++G ++ E   D    PAS+TK+ TA ++         +          +I+  A +
Sbjct: 1   MHADSGAILKEKNLDQKIFPASMTKIATALLILRKHPDVLTRFITIRREPLTSITPQAKQ 60

Query: 89  YPPSNSTFKK------------GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                S                   ++  +    L++ SAND A  +A++ C++   F+ 
Sbjct: 61  QSGYRSPPHWLETDGVAIQLKSKEEVSGWDLFHALLISSANDAANVLADACCQSVPAFMH 120

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-----TDFPQYMHYFQIK 191
            +N+  K +G   THF + HG+    HYTTARD+AI+              +   Y    
Sbjct: 121 QLNDFLKEIGCQNTHFNSPHGLHHPDHYTTARDLAIIMKEALKEPLFCQVIRTASYTMES 180

Query: 192 GLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 +   +TN      +   +    G KTG T ++G NIV +A + ++S+I V  G 
Sbjct: 181 TNLSPERTLSSTNRLLSSSSTYFYPPCLGGKTGTTKSAGKNIVFAAEKNNRSIIVVAAGY 240

Query: 247 LDR-NTRNKVSAS----LLS----MGF-----YNKTDRKKINYIIKDFYQQNLSNEVPNI 292
                   + + +    L +      F        + + K   I     Q    +  P+ 
Sbjct: 241 FGPAAQLYQDAIAVCEDLFNEQLLRCFLLPPASQYSVKTKFGPITAPVSQGIYYDFYPSE 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDK 316
            + + +   E       +++    
Sbjct: 301 GDPLLSLSLESSKIAFPIRQGDLL 324


>gi|331091125|ref|ZP_08339967.1| hypothetical protein HMPREF9477_00610 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405347|gb|EGG84883.1| hypothetical protein HMPREF9477_00610 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 321

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 22/250 (8%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L   +   V+          PAS TK++TA V   +       L   +T+SK A+E
Sbjct: 73  SAAGLFSLDDKEVLYGRNIYKKIYPASTTKILTALVALKY-----GNLDDVVTVSKTATE 127

Query: 89  YPPSN--STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +PP+      K+G  +TL   L  L++ S ND AVAIAE +  + ++F + MN  + ++G
Sbjct: 128 FPPAASLCGIKEGDKLTLRELLYGLLLPSGNDAAVAIAEHISGSVEEFAKLMNKEAYSIG 187

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGKKYPNT 203
            + THF+N HG+    HYTTA D+ ++  +            + K               
Sbjct: 188 ATHTHFVNPHGLHDDNHYTTAYDLYLIFNQCIQYDEFIKIVSETKYDLPVTSADGTSRTL 247

Query: 204 NWAVGTFLG-----------ADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRNT 251
           N    +  G             G KTG T  +   ++  +      S +++++GA  ++ 
Sbjct: 248 NLETTSLYGLGEAEKPEHMTVIGGKTGNTGEAKRCLILLSKDEQGHSYVSIVMGAETKSL 307

Query: 252 RNKVSASLLS 261
                  +L+
Sbjct: 308 VYTNMNKMLN 317


>gi|146182375|ref|XP_001024481.2| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|146143834|gb|EAS04236.2| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 583

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 113/279 (40%), Gaps = 38/279 (13%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT-TPI 80
                    + +L+     ++A    +     ASLTK+MT Y+V  ++++   +   T  
Sbjct: 291 KPPKITSRSWIILNGKNKKLVAGQNENQVREIASLTKMMTCYIVVHYIRKLNLIPEKTYF 350

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------------- 127
            +S +A+  P + +   +G  +++ + L  +++ S ND A  +AE+              
Sbjct: 351 KVSAHAANQPGTTAGLTEGDVVSIMDLLYGMMLPSGNDAAFVLAENFGVYLYMQTDKFKE 410

Query: 128 -------------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
                              F++ MN+ ++ L +  T+F N HG++   + +T+ D+ +LS
Sbjct: 411 KYGNAQTNKKLKVKNPITYFIKEMNDFAEKLNMQDTYFTNPHGLMHKKNKSTSYDVGLLS 470

Query: 175 WRIKTDFPQYMHYFQIKGL----------EIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           + +  D        Q              +     + NTN  +    G  G+KTG T ++
Sbjct: 471 YYLIHDPLIKQIMAQQTYNANIMTETLQLKNPPTIWKNTNKMLKKT-GFLGLKTGITPSA 529

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           G  + +     + +LI ++LGA     R   +  LL   
Sbjct: 530 GPCLASWYNHENINLIIILLGAKSLEERWVETVQLLEWA 568


>gi|301337031|ref|ZP_07225233.1| D-alanyl-D-alanine carboxypeptidase [Chlamydia muridarum MopnTet14]
          Length = 398

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 120/324 (37%), Gaps = 41/324 (12%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL-----KEKKAMLTTPITISKNASE 88
           +  ++G ++ E   D    PAS+TK+ TA ++         +          +I+  A +
Sbjct: 1   MHADSGAILKEKNLDQKIFPASMTKIATALLILRKHPDVLTRFITIRREPLTSITPQAKQ 60

Query: 89  YPPSNSTFKK------------GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                S                   ++  +    L++ SAND A  +A++ C++   F+ 
Sbjct: 61  QSGYRSPPHWLETDGVAIQLKSKEEVSGWDLFHALLISSANDAANVLADACCQSVPAFMH 120

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK-----TDFPQYMHYFQIK 191
            +N+  K +G   THF + HG+    HYTTARD+AI+              +   Y    
Sbjct: 121 QLNDFLKEIGCQNTHFNSPHGLHHPDHYTTARDLAIIMKEALKEPLFCQVIRTASYTMES 180

Query: 192 GLEIKGKKYPNTNW-----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 +   +TN      +   +    G KTG T ++G NIV +A + ++S+I V  G 
Sbjct: 181 TNLSPERTLSSTNRLLSSSSTYFYPPCLGGKTGTTKSAGKNIVFAAEKNNRSIIVVAAGY 240

Query: 247 LDR-NTRNKVSAS----LLS----MGF-----YNKTDRKKINYIIKDFYQQNLSNEVPNI 292
                   + + +    L +      F        + + K   I     Q    +  P+ 
Sbjct: 241 FGPAAQLYQDAIAVCEDLFNEQLLRCFLLPPASQYSVKTKFGPITAPVSQGIYYDFYPSE 300

Query: 293 SEEVCTTQKEIINYNTQMKEAKDK 316
            + + +   E       +++    
Sbjct: 301 GDPLLSLSLESSKIAFPIRQGDLL 324


>gi|14719796|pdb|1J9M|A Chain A, K38h Mutant Of Streptomyces K15 Dd-Transpeptidase
          Length = 262

 Score =  105 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S T +MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTHIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ S  D A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +     R   +  +++ GF 
Sbjct: 240 LASTSIPARESDATKIMNYGFA 261


>gi|330979275|gb|EGH78054.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 266

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 93/236 (39%), Gaps = 8/236 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  T  V+  + PD     AS+TKLMTA VV    +    ++   I+ +        
Sbjct: 1   MVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPE---MKG 57

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S  K GS M   + L + ++ S N  A ++A S       F+  MN  +K LG+  T 
Sbjct: 58  VFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTA 117

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP----NTNWAV 207
           ++   G+  +   T      ++    K      +   + K +  +   Y     NT+  V
Sbjct: 118 YVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLV 177

Query: 208 GTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                     KTGFT  +G  +V      ++ +  VIL A  + T    ++ +   
Sbjct: 178 RKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKW 233


>gi|325662481|ref|ZP_08151084.1| hypothetical protein HMPREF0490_01824 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471177|gb|EGC74402.1| hypothetical protein HMPREF0490_01824 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 451

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 127/326 (38%), Gaps = 37/326 (11%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + + +TG ++ E   D  W PAS+TKLMT  + +  ++E K      + +++  ++   
Sbjct: 70  IITEIHTGQILWEENKDVSWAPASMTKLMTILLAYDAMEEGKFEKDMQVAVNEKYTDIAG 129

Query: 92  SNSTFKKGSTMTLDNA----LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
             +       M         + L+IV S+      +A+ +     KFV  MN  +K +G+
Sbjct: 130 RYALSNNVMQMGATYTVGELIDLIIVPSSAAATYMLADLVEPDPDKFVALMNQKAKEIGM 189

Query: 148 SATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           + T + N  GV                  + T+ +D A+L       +P  + +     +
Sbjct: 190 THTTYYNCVGVTNDLLYPYAPKNLPADADNVTSPQDYALLCSYFVKTYPDILTHTSSPEI 249

Query: 194 EIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            +K       ++               G DG+KTG +  +GFN  ++A + D  L+ +++
Sbjct: 250 VVKEGTPYEEHFKSYQISLEGAKYGLKGTDGLKTGSSGRAGFNYSSTAKRQDTRLVEIVM 309

Query: 245 GALD------RNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCT 298
           G  D         R+ V  +++   F     RK +        ++ +  +        C 
Sbjct: 310 GVSDWTDQTGEELRHLVGNAIMEQAFEKYEYRKVLPKGTHQIGKEKIVTKKDLW---DCV 366

Query: 299 TQKEIINYNTQM-KEAKDKESHFIDF 323
            ++E + +  +  K   D E  ++  
Sbjct: 367 PKEEKVKFKMEDGKVFVDLERQYLPG 392


>gi|259046993|ref|ZP_05737394.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella adiacens
           ATCC 49175]
 gi|259036312|gb|EEW37567.1| serine-type D-Ala-D-Ala carboxypeptidase [Granulicatella adiacens
           ATCC 49175]
          Length = 471

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 73/379 (19%), Positives = 143/379 (37%), Gaps = 57/379 (15%)

Query: 1   MRQFLVIIAMAMLSNI-----FPFLSIAETN---------------KLPYYTLLDTNTGH 40
           M++ + ++ +  L  +        ++  E+                      ++    G 
Sbjct: 20  MKKIIKLVCVLFLLMMGVIGTISTVNAQESILKVVKDEGYEISSSDTPKASLVVSIANGE 79

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTF 96
           ++ +  PD   +PASL+KLMT ++V+  +KE K  L+  +  +            SN   
Sbjct: 80  ILWQENPDRAVDPASLSKLMTIFIVYDAIKEGKISLSDKVVPTATDEAISKITALSNVPL 139

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
             G    ++  +K+ ++ S+N   + ++  +     +FV  MN  +K LG++ T F  A 
Sbjct: 140 TAGVEYPVEELVKMALLPSSNAATILLSHLVNDNSDEFVDLMNQKAKELGMTNTKFEGAT 199

Query: 157 G---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIK 196
           G                +   + TTARD+A +   +    P+   Y       +      
Sbjct: 200 GAVAEDFQGHYTVKRHSMNQPNQTTARDLAKMVIALYKSHPEITQYTRNSTLTVMSGTPY 259

Query: 197 GKKYPNTNWAVG----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------A 246
            +   NTN +V      + G  G+KTG +   GFN +    +    L+ ++LG      A
Sbjct: 260 AQTIKNTNHSVQGDLLAYPGIIGLKTGTSERDGFNYIGIYQKDGVELLDIVLGVSEWTSA 319

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
                R+K+  +LLS        +   N  I+    Q +     + + +V T + +   Y
Sbjct: 320 AGEYNRHKIGNALLSYVLKQYEAQTLFNPGIQTIQGQKVK---LDHAVKVFTEKGKTATY 376

Query: 307 NTQMKEAKDKESHFIDFEK 325
             +    K        +E+
Sbjct: 377 QIEGNHLKVATPQGTIYEQ 395


>gi|7766855|pdb|1ESI|A Chain A, R248l Mutant Of Streptomyces K15 Dd-Transpeptidase
          Length = 262

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 103/262 (39%), Gaps = 24/262 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            T        ++  TG  +     D   +  S TK+MTA VV +        L   +TI 
Sbjct: 4   PTIAAVGGYAMNNGTGTTLYTKAADTRRSTGSTTKIMTAKVVLAQS---NLNLDAKVTIQ 60

Query: 83  ---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
              S        S +    G  +T+   L  L++ S  D A A+A+       +  +   
Sbjct: 61  KAYSDYVVANNASQAHLIVGDKVTVRQLLYGLMLPSGCDAAYALADKYGSGSTRAARVKS 120

Query: 137 ---HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
               MN  + NLGL  THF +  G+    +Y+T RD+  ++         +    + K  
Sbjct: 121 FIGKMNTAATNLGLHNTHFDSFDGIGNGANYSTPRDLTKIAS-SAMKNSTFRTVVKTKAY 179

Query: 194 EIK----------GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             K             + NTN  + ++ GA G+KTG    + + +V +A +G +++I  +
Sbjct: 180 TAKTVTKTGSIRTMDTWKNTNGLLSSYSGAIGVKTGSGPEAKYCLVFAATRGGKTVIGTV 239

Query: 244 LGALDRNTRNKVSASLLSMGFY 265
           L +         +  +++ GF 
Sbjct: 240 LASTSIPALESDATKIMNYGFA 261


>gi|167590610|ref|ZP_02382998.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ubonensis Bu]
          Length = 356

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 94/255 (36%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++       A         +LD +TG  +           AS++KLMTA V     + 
Sbjct: 100 LLASCGYSPRAANALHSRAAYVLDVSTGTPLLARNARTVRPIASISKLMTAVVARDADRP 159

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              ML      S +      ++S    GST++  +  ++ ++ S N  A A++       
Sbjct: 160 LDGML---RVSSHDRDTIKFTHSRLSVGSTLSRRDMYRIALMSSENRAAAALSRDYPGGR 216

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYF 188
             FV  MN  ++ LG+  T F    G+    + +TA ++A+L      D           
Sbjct: 217 PAFVAAMNREARRLGMRRTRFREPTGL-SPRNVSTAEELALLVDAAARDPLIRRFSTAKS 275

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                      Y N++  V          KTGF   +G  +V  A+   +    V+LG+ 
Sbjct: 276 GTVHPGDGKLLYVNSDPLVRYGQWPIQLQKTGFINEAGHGVVMRALVRGRPQTIVLLGSP 335

Query: 248 DRNTRNKVSASLLSM 262
            R+     +  +   
Sbjct: 336 TRDGVTSDALRIRRW 350


>gi|242315730|ref|ZP_04814746.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
 gi|242138969|gb|EES25371.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 428

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 172 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 231

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 232 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 287

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 288 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 346

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 347 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 406

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 407 PGPHDHVADAAKIRRW 422


>gi|167901817|ref|ZP_02489022.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 378

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 122 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 181

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 182 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 237

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 238 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 296

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 297 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 356

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 357 PGPHDHVADAAKIRRW 372


>gi|167718649|ref|ZP_02401885.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei DM98]
          Length = 378

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 122 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 181

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 182 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 237

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 238 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 296

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 297 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 356

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 357 PGPHDHVADAAKIRRW 372


>gi|254190742|ref|ZP_04897249.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938417|gb|EDO94087.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 470

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 214 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 273

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 274 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 329

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 330 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 388

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 389 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 448

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 449 PGPHDHVADAAKIRRW 464


>gi|134281097|ref|ZP_01767806.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
 gi|134247403|gb|EBA47488.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 305]
          Length = 478

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 222 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 281

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 282 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 337

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 338 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 396

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 397 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 456

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 457 PGPHDHVADAAKIRRW 472


>gi|76810222|ref|YP_332685.1| murein-DD-endopeptidase [Burkholderia pseudomallei 1710b]
 gi|76579675|gb|ABA49150.1| murein-DD-endopeptidase [Burkholderia pseudomallei 1710b]
          Length = 452

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 196 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 255

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 256 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 311

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 312 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 370

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 371 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 430

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 431 PGPHDHVADAAKIRRW 446


>gi|53718694|ref|YP_107680.1| murein-DD-endopeptidase [Burkholderia pseudomallei K96243]
 gi|126441783|ref|YP_001058168.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 668]
 gi|167814810|ref|ZP_02446490.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 91]
 gi|254260216|ref|ZP_04951270.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
 gi|52209108|emb|CAH35050.1| murein-DD-endopeptidase [Burkholderia pseudomallei K96243]
 gi|126221276|gb|ABN84782.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           668]
 gi|254218905|gb|EET08289.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 378

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 122 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 181

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 182 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 237

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 238 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 296

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 297 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 356

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 357 PGPHDHVADAAKIRRW 372


>gi|53724420|ref|YP_104522.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 23344]
 gi|121598323|ref|YP_992318.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei SAVP1]
 gi|124386019|ref|YP_001028989.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449096|ref|YP_001081092.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei NCTC 10247]
 gi|126451732|ref|YP_001065404.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|166999947|ref|ZP_02265776.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei PRL-20]
 gi|167744606|ref|ZP_02417380.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 14]
 gi|167823267|ref|ZP_02454738.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 9]
 gi|167844811|ref|ZP_02470319.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei B7210]
 gi|167910041|ref|ZP_02497132.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 112]
 gi|217419635|ref|ZP_03451141.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|226194446|ref|ZP_03790044.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237811386|ref|YP_002895837.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|238563378|ref|ZP_00438972.2| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|254178365|ref|ZP_04885020.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254181346|ref|ZP_04887943.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1655]
 gi|254197054|ref|ZP_04903478.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei S13]
 gi|254201603|ref|ZP_04907967.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei FMH]
 gi|254206936|ref|ZP_04913287.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei JHU]
 gi|254357915|ref|ZP_04974188.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei 2002721280]
 gi|52427843|gb|AAU48436.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 23344]
 gi|121227133|gb|ABM49651.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei SAVP1]
 gi|124294039|gb|ABN03308.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
           10229]
 gi|126225374|gb|ABN88914.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1106a]
 gi|126241966|gb|ABO05059.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia mallei NCTC
           10247]
 gi|147747497|gb|EDK54573.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei FMH]
 gi|147752478|gb|EDK59544.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei JHU]
 gi|148027042|gb|EDK85063.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei 2002721280]
 gi|160699404|gb|EDP89374.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei ATCC 10399]
 gi|169653797|gb|EDS86490.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei S13]
 gi|184211884|gb|EDU08927.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei 1655]
 gi|217396939|gb|EEC36955.1| serine-type D-Ala-D-Ala carboxypeptidase [Burkholderia pseudomallei
           576]
 gi|225933531|gb|EEH29520.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|237505712|gb|ACQ98030.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|238520825|gb|EEP84282.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|243064065|gb|EES46251.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           mallei PRL-20]
          Length = 378

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 122 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANRVMPIASVTKLMTSMVALDTRAP 181

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 182 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 237

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L                 
Sbjct: 238 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAASRYPRIKTFSTAT 296

Query: 191 KGLEI---KGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                      +Y N++             KTGF   +G  +V       + +  V+LGA
Sbjct: 297 SKTVFPGRGQLRYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 356

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 357 PGPHDHVADAAKIRRW 372


>gi|262067346|ref|ZP_06026958.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378909|gb|EFE86427.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 424

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 7/237 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
             L+    G+VI    PD  +  AS+TK+M+  V F  +      L   + ISK   +Y 
Sbjct: 171 AVLIGDLNGNVIFSKNPDTMYPLASVTKVMSLLVTFDEINAGNIGLHDSVRISKTPLKYG 230

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLG-LS 148
            S    K+G    L++ +K   V SAN+   A+AE + + +   FV  MN   K LG  +
Sbjct: 231 GSGIPLKEGQIFILEDLIKASAVYSANNATYAMAEYVGEGSIFNFVAKMNRKLKQLGLQN 290

Query: 149 ATHFMNAHGVVQHGHYTTARDMA----ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
              +    G+          +               + +Y+    IK  +I   K    N
Sbjct: 291 DIKYYTPAGLPTRNTKMPMDEGTPRGIYKLSIEALKYHKYIEIAGIKNTKIHNDKISIRN 350

Query: 205 WAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
                   G  G+KTGF   + +NI  +       LI V++G     TR+ +  +++
Sbjct: 351 RNHLIGEDGVYGIKTGFHKEAKYNITVAVKFEGIDLIIVVMGGETYKTRDDLVRTII 407


>gi|154267921|gb|ABS72056.1| D,D carboxypeptidase [Ruminococcus gauvreauii]
          Length = 356

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 29/260 (11%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +++ +T  V+ +        PAS  K++ A     +           + +  
Sbjct: 98  NIAAANAIVMNKDTNEVLYQKKSTAKIAPASTAKMIMALTALDYC-----SPEDEMKVGA 152

Query: 85  NASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAES------------LCKT 130
                   +S     KG T+T+   L  L++ S ND A  +A +              + 
Sbjct: 153 EIEMIQSDSSTAWLMKGDTLTVRQLLIALMLPSGNDAAYTLAVNTGKKIAGDKSLTHQQA 212

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----H 186
            + F+  +N  + NLG + + F+   G    G YTTA D+AI++     +         +
Sbjct: 213 IEVFMDKVNEKAVNLGATNSKFVAPDGYDAEGQYTTAYDLAIIAKACLDNPIISEIVASY 272

Query: 187 YFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               K    +   Y N+N      +        G+KTG +   G  IV++A+   ++ I 
Sbjct: 273 SSYEKWPNGREVTYSNSNELLDPNSPYYRPEVIGLKTGTSSLGGACIVSAAVIDGETYIC 332

Query: 242 VILGALDRNTRNKVSASLLS 261
           V++G+  + +R + S  +L 
Sbjct: 333 VVMGS-TKESRFQDSVDILD 351


>gi|167618346|ref|ZP_02386977.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis Bt4]
          Length = 355

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 92/255 (36%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 99  LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANCVVPIASVTKLMTSMVALDTRAP 158

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS +   + L + ++ S N  A A++      
Sbjct: 159 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLPRRDMLHIALMSSENRAAAALSRDYPGG 214

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+      T      +++   +    +       
Sbjct: 215 RPAFVAAMNRKARTLGMKHTHFVNATGLSPRNVSTARDLSRLVAAASRYPHIKSFSTDTS 274

Query: 191 KGLEIKGKKYPNTNWA---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           K +     +    N               KTGF   +G  +V       + +  V+LGA 
Sbjct: 275 KTVFPGRGQLHYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGAP 334

Query: 248 DRNTRNKVSASLLSM 262
             +     +A +   
Sbjct: 335 GPHDHVADAAKIRRW 349


>gi|83719868|ref|YP_441464.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
 gi|257139857|ref|ZP_05588119.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
 gi|83653693|gb|ABC37756.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis E264]
          Length = 383

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 92/255 (36%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L+      +     +     ++D  TG V+ E   +     AS+TKLMT+ V       
Sbjct: 127 LLARCGYTAASRHLLRSRAIYVVDERTGTVLIERNANCVVPIASVTKLMTSMVALDTRAP 186

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS +   + L + ++ S N  A A++      
Sbjct: 187 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLPRRDMLHIALMSSENRAAAALSRDYPGG 242

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF+NA G+      T      +++   +    +       
Sbjct: 243 RPAFVAAMNRKARTLGMKHTHFVNATGLSPRNVSTARDLSRLVAAASRYPHIKSFSTDTS 302

Query: 191 KGLEIKGKKYPNTNWA---VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           K +     +    N               KTGF   +G  +V       + +  V+LGA 
Sbjct: 303 KTVFPGRGQLHYVNSDALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGAP 362

Query: 248 DRNTRNKVSASLLSM 262
             +     +A +   
Sbjct: 363 GPHDHVADAAKIRRW 377


>gi|295094843|emb|CBK83934.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus sp. ART55/1]
          Length = 321

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 100/272 (36%), Gaps = 28/272 (10%)

Query: 18  PFLSIAETNKL------PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
             ++  E              L+D  T   I  +       PAS+TK+MT  +V   +++
Sbjct: 51  AVIAQGEEIDAANYNGCYAAMLVDETTKDTIVAHNVHGKIYPASMTKIMTGILVMESIEK 110

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKG--STMTLDNALKLLIVKSANDIAVAIAESLCK 129
               L   +T+++  +               ++T+ N L  L++ S ND  V +AE +  
Sbjct: 111 GDISLDDVVTLNRKVTFDDWDAMASDLVGGCSLTVKNLLYGLMITSYNDCGVILAELIAG 170

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR-------IKTDFP 182
           +E  F   MN  +K +G + THF+N HG+    HYTTA D+ ++             D  
Sbjct: 171 SESAFCDMMNEKAKEIGATNTHFVNCHGLHDDDHYTTAYDLYLIIKEFSKHDLAYVIDSL 230

Query: 183 QYMHYFQI---------KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
               +                         N+  G  +G+   KTG T  +   ++    
Sbjct: 231 DTYDFTYTDADGNEQVVTIEPTNEFLTGEVNFPDGYSIGSW--KTGTTEEALNCLIMELK 288

Query: 234 QG--DQSLIAVILGALDRNTRNKVSASLLSMG 263
                +  IA++ GA  +         L++  
Sbjct: 289 NDSTGEEYIALVAGADGKEALYSAMTELINKA 320


>gi|118398512|ref|XP_001031584.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89285915|gb|EAR83921.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 617

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 36/280 (12%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML-T 77
           F  + ++     + +L+ N G ++  N        ASLTK+MT YV    ++        
Sbjct: 322 FTKLPQSVSAESWAVLNANNGQILFGNNHFIIRQMASLTKIMTLYVSLKVIQALDISPFR 381

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI-------------- 123
           T + +SK A+    +++   +G  ++L + +  +++ S ND A A+              
Sbjct: 382 TYVEVSKKAASMNGTSARLIEGDRLSLWDLMHGMMLPSGNDAATALAENLGVFLYYQSEE 441

Query: 124 ---------------AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
                             +  ++  F+  MN  + NL L+ THF N  G+V + + +TA 
Sbjct: 442 YKLQYQQNPQQFQNEKFRVKNSQGYFINQMNKYAHNLQLNNTHFANPTGLVNNFNRSTAA 501

Query: 169 DMAILSWRIKTDFP------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           D+A LS+ +  +           H+ QI     K +     N       G  G+KTG T 
Sbjct: 502 DLAKLSYHLIKEEQVKKIVECKYHFAQIYMNNNKKRSVIFENTNKLLSHGYSGLKTGITT 561

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           A+G  + A       +LI ++L +     R   + +L+S 
Sbjct: 562 AAGPCLSAWYKDDQVNLIIILLNSSSMEQRWVDTQNLVSC 601


>gi|262038951|ref|ZP_06012291.1| serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia goodfellowii
           F0264]
 gi|261747032|gb|EEY34531.1| serine-type D-Ala-D-Ala carboxypeptidase [Leptotrichia goodfellowii
           F0264]
          Length = 541

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 63/303 (20%), Positives = 114/303 (37%), Gaps = 15/303 (4%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G +I +         ASLTK+M   V    + +    L   +  +   +    S    K 
Sbjct: 205 GKIIKKELETQQHPIASLTKVMNILVALDEVDKGNVSLDDKVCFTPQNANVGGSWLNVKV 264

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G    L + L+  I+ SAN+ A  +A  +     + FV+ MN  +K LG++ T F    G
Sbjct: 265 GDCYLLRDLLRSEIIYSANNSAYLVAYHVGKGNIEYFVKLMNQKAKELGMNNTEFHTPAG 324

Query: 158 VVQH-----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK----GKKYPNTNWAVG 208
           +           +TA DM ++  +   D        + + + +        Y + N  +G
Sbjct: 325 LPTTMTGKGMDVSTAYDMFLMGKKAIEDKRIREWASEPELVLVNPAGEQVIYKSRNHLLG 384

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G  G+KTGF   +G+NI+ +   G+  +I+V+LG    N R K    L    F    
Sbjct: 385 QY-GIYGLKTGFHVQAGYNIIVTGKMGNIEIISVVLGHKTHNQRTKD--QLEE--FSQIK 439

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +R K  + + +   +    + P    +    +      +T                K  +
Sbjct: 440 NRLKKIHTMGEEIGEFKIKDSPKRKIKGVLAENVYQLDDTNYDFKTVGIDAKAKINKGDV 499

Query: 329 LKN 331
           +  
Sbjct: 500 IGK 502


>gi|322390800|ref|ZP_08064310.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 903]
 gi|321142470|gb|EFX37938.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           parasanguinis ATCC 903]
          Length = 440

 Score =  105 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 36/337 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           K     ++D NTG ++  +  D   +  S+ KLM+AYVVF  LKE K    T +T ++  
Sbjct: 61  KPKADIVIDANTGAILYGDNIDTVRDSGSMAKLMSAYVVFRALKEGKIKYDTVVTATEAD 120

Query: 87  SEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNT 141
                +    NS    G    +   +K+L V S++   + +A +       KF+  MN  
Sbjct: 121 QAISENNLLSNSPIVAGVDYKVSELIKMLFVPSSSAAVIMLANAVTDNDPDKFLDLMNQY 180

Query: 142 SKNLGLSATHFMNAHGVV---------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
           ++ +G+S T + N +G +                  +  TARDM+IL++ I  D P+ + 
Sbjct: 181 AQEMGMSHTKWHNPNGAMISVLQGYYNPQRYDVNANNEITARDMSILAYHIVNDLPEMLE 240

Query: 187 YFQIKGLEIKGKK-----YPNTNWAVGTF----LGADGMKTGFTCASGFNIVASAIQGDQ 237
           Y +     I         Y N N ++        G DG+KTG +  + +N  A+  +G Q
Sbjct: 241 YTKQAHTTIMEGTPYEQSYDNYNTSLEGGKFALKGTDGLKTGSSPTADYNYTATTKRGKQ 300

Query: 238 SLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            +I VILG  + +       RN++  +L    F +   +K ++            +   +
Sbjct: 301 RIIEVILGVGNYDVEIAESYRNQIGNTLAEKMFADYQYKKILSAGD-HTIDGKTIHLKQD 359

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               V    K  +         ++         K  +
Sbjct: 360 FYATVKKGTKPALKLEDNRLVVQNGLQQVSPSIKAGV 396


>gi|225378096|ref|ZP_03755317.1| hypothetical protein ROSEINA2194_03756 [Roseburia inulinivorans DSM
           16841]
 gi|225210097|gb|EEG92451.1| hypothetical protein ROSEINA2194_03756 [Roseburia inulinivorans DSM
           16841]
          Length = 328

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 23/256 (8%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                  +  T  V           PAS TK++TAY+   +       L   +T+S+NA+
Sbjct: 79  AEGAGTFNLATNTVTYAQNIYEKLYPASTTKILTAYIALKY-----GNLEDYVTVSENAA 133

Query: 88  EY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S    K G  + L + L  +++KS ND A+AIAE +  + + F   MN  +  +
Sbjct: 134 NQASDSSVCGLKAGDVVQLKDLLYGMMLKSGNDAAIAIAEHIGGSVEGFADMMNQEALAM 193

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK------- 198
           G + +HF+N +G+    HYT+  D+ ++      D         +    +          
Sbjct: 194 GATRSHFVNPNGLPDENHYTSVYDLYLIFQNAVQDQTFLDIISTMSYDVVYTDVNGAGVE 253

Query: 199 -KYPNTNWAVGTFL------GADGMKTGFTCASGFNIV-ASAIQGDQSLIAVILGALDRN 250
             + NTN  +             G KTG T A+G+ +V  S     Q +++++L A  ++
Sbjct: 254 KTWENTNQYLTGKEKAPEGITVVGGKTGTTGAAGYCLVLYSYNASGQPIVSIVLKADGKS 313

Query: 251 TRNKVSASLLSMGFYN 266
               +   +LS GF N
Sbjct: 314 NLYLLMNEMLS-GFAN 328


>gi|210614029|ref|ZP_03290008.1| hypothetical protein CLONEX_02221 [Clostridium nexile DSM 1787]
 gi|210150881|gb|EEA81889.1| hypothetical protein CLONEX_02221 [Clostridium nexile DSM 1787]
          Length = 325

 Score =  105 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 11/235 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   ++  +   VI +   D    PASLTK+MT  +    +   +A +T    I  
Sbjct: 69  QLHSSAGIVISLDDSKVIFQFQQDEKIFPASLTKIMTCILAIENINNLEATITLEPEIFD 128

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F  G    + + L   I+ S  + ++A+AE +  +E+ FV+ MN  +K+
Sbjct: 129 ELYAQNASMAGFLPGENAKIIDILYGNILPSGGECSIALAEYVAGSEQAFVELMNEKAKD 188

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP-------QYMHYFQIKGLEIKG 197
           LG++ THFMNA G+    HYTT +D+ IL      +         +              
Sbjct: 189 LGMNNTHFMNATGLHNESHYTTVKDIGILLQYALKNQTFNDIFQSKSYFVAPTDQHLSGF 248

Query: 198 KKYPNTNW---AVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
             Y +            G   G KTG+T  +G  + + AI   +  IA+ + A  
Sbjct: 249 TFYSSMFKLRDQWELDEGEIVGGKTGYTDEAGLCLASEAIVNGRKYIAITVNAEG 303


>gi|330900670|gb|EGH32089.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 266

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 8/236 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++D  T  V+  + PD     AS+TKLMTA VV    +    ++   I+ +        
Sbjct: 1   MVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDEVIPVNISQTPE---MKG 57

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S  K GS M   + L + ++ S N  A ++A S       F+  MN  +K LG+  T 
Sbjct: 58  VFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTA 117

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP----NTNWAV 207
           ++   G+  +   T      ++    K      +   + K +  +   Y     NT+  V
Sbjct: 118 YVEPTGLSVYNVSTARDLTKLVMAARKYPLLSELSTTEQKTVTFRKPTYTLGFSNTDHLV 177

Query: 208 GTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                     KTGFT  +G  +V      ++ +  VIL A  + T    +  +   
Sbjct: 178 RKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVILDAFGKYTHFADAGRIRKW 233


>gi|5353565|gb|AAD42182.1|AF130997_3 D,D carboxypeptidase [Enterococcus faecium]
          Length = 356

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 29/260 (11%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +++ +T  V+ +        PAS  K++ A     +           + +  
Sbjct: 98  NITAANAIVMNKDTNEVLYQKKSTAKIAPASTAKMIMALTALDYC-----SPEDEMKVGA 152

Query: 85  NASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------------CKT 130
                   +S     KG T+T+   L  L++ S ND A  +A +              + 
Sbjct: 153 EIGMIQSDSSTAWLMKGDTLTVRQLLIALMLPSGNDAAYTLAVNTGKAIAGDNSLTSQQA 212

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----H 186
            + F+  +N  +  LG + + F+   G    G YTTA D+AI++     +         +
Sbjct: 213 IEVFMDKVNEKAVALGATNSKFVAPDGYDAEGQYTTAYDLAIIAKACLDNPIISEIVASY 272

Query: 187 YFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               K    +   Y N+N      +        G+KTG +   G  IV++A+   ++ I 
Sbjct: 273 SSYEKWSNGREVTYNNSNELLDPNSPYYRPEVIGLKTGTSSLGGACIVSAAVMDGETYIC 332

Query: 242 VILGALDRNTRNKVSASLLS 261
           V++G+  + +R + S  +L 
Sbjct: 333 VVMGS-TKESRFQDSVDILD 351


>gi|315651403|ref|ZP_07904428.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saburreum DSM
           3986]
 gi|315486362|gb|EFU76719.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium saburreum DSM
           3986]
          Length = 326

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 23/265 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+        A+        ++  + G ++A         PAS TK+MTA +   +    
Sbjct: 64  LALPSDDEVNADDISAQAAIIV-KDDGSLLASKAATKKMYPASTTKVMTALLALKYS--- 119

Query: 73  KAMLTTPITISKN--ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
              L+  + +       E   S +    G  +TLD  L  L++ S ND A AIA  +  +
Sbjct: 120 --NLSDEVVVPDESVIDEAGASLAGIHPGDKLTLDELLYGLMLPSGNDAANAIAVHIGGS 177

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD---------- 180
            + FV+ MN  +K +G   T+F+NA+G+    HYTTA D+ ++      D          
Sbjct: 178 VESFVKMMNEEAKRIGAVDTNFVNANGLSDDNHYTTAYDLYLILNEAMKDSRFVNYAGAA 237

Query: 181 ----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-G 235
                       QI      G KY      +   +  +  KTG T A+G  +V +     
Sbjct: 238 SYSVTYTAADGSQITKNWKNGNKYITGQEVIPKGVSVEAGKTGTTFAAGSCLVLAGKNAD 297

Query: 236 DQSLIAVILGALDRNTRNKVSASLL 260
               I+V+L A +R       + LL
Sbjct: 298 GNRYISVVLKAQNRAGLYDNMSKLL 322


>gi|30261982|ref|NP_844359.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Ames]
 gi|47527245|ref|YP_018594.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184822|ref|YP_028074.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|65319265|ref|ZP_00392224.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
 gi|165870241|ref|ZP_02214897.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|167632885|ref|ZP_02391211.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|167638465|ref|ZP_02396742.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0193]
 gi|170686389|ref|ZP_02877610.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|177650876|ref|ZP_02933773.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0174]
 gi|190566291|ref|ZP_03019209.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227815230|ref|YP_002815239.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CDC 684]
 gi|229601545|ref|YP_002866353.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
 gi|254684545|ref|ZP_05148405.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254721303|ref|ZP_05183093.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A1055]
 gi|254734848|ref|ZP_05192560.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254741249|ref|ZP_05198937.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254755503|ref|ZP_05207537.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Vollum]
 gi|254760039|ref|ZP_05212063.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Australia 94]
 gi|30256608|gb|AAP25845.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           Ames]
 gi|47502393|gb|AAT31069.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178749|gb|AAT54125.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|164714129|gb|EDR19650.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0488]
 gi|167513766|gb|EDR89135.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0193]
 gi|167531697|gb|EDR94362.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0442]
 gi|170669465|gb|EDT20207.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0465]
 gi|172083337|gb|EDT68398.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0174]
 gi|190562426|gb|EDV16393.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227006117|gb|ACP15860.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus anthracis str.
           CDC 684]
 gi|229265953|gb|ACQ47590.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. A0248]
          Length = 285

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 44/261 (16%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           + P   I          ++D + G +I ++  +  + PA                     
Sbjct: 53  VVPPKYIPPEVDAKAAMIIDASNGDIIYQHNENEAFAPA--------------------- 91

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                      ++   +    +   T+T+ +    L+++SAN+ AVA+AE + KTEK FV
Sbjct: 92  -----------AQTEGARIPVQVNDTLTVKDLFHALMIESANNSAVALAEHMAKTEKDFV 140

Query: 136 QHMNNTSKNLGLSAT-HFMNAHGV---VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           Q MN  +K L +S    F NA G+          TA D+A L++ +  D+P+ +    ++
Sbjct: 141 QLMNAKAKQLKMSDYAKFANASGLQEPDGSETKMTAADVANLAYHLIKDYPEILEVTHLR 200

Query: 192 GLEIKGKKYP--------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
             ++              N N       G DG+KTGFT ++G+    +A QGD  +I V+
Sbjct: 201 QSQLAFNNINVISTNDMLNKNNKALYIEGIDGLKTGFTDSAGYCFTGTAKQGDTRIITVV 260

Query: 244 LGALDRNTRNKVSASLLSMGF 264
           +G   +  R   +  L++  F
Sbjct: 261 MGTKGKTKRFTETNKLMTYAF 281


>gi|284992776|ref|YP_003411330.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Geodermatophilus obscurus DSM 43160]
 gi|284066021|gb|ADB76959.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Geodermatophilus obscurus DSM 43160]
          Length = 439

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 89/254 (35%), Gaps = 14/254 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              + +    P + + D  +G V+A   P   + PAS         +             
Sbjct: 79  TAPLPDEVVAPGWLVADAGSGAVLAARDPHGRYYPASTL-----KTLTLLTLLPVLDPAE 133

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +  +        S      G    +    + L+++S ND A A            V+ M
Sbjct: 134 VVEGTVEDEAVEGSRVGMVAGGRYPVPLLYQALVMQSGNDAANA-LARAAGGTDVTVRAM 192

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF------PQYMHYFQIKG 192
           N  + ++G   T      G+   G  ++  D+A++  R+  D          +       
Sbjct: 193 NEVAGSIGAFDTVAGTPSGLDVAGQSSSPYDLALVFRRLVEDPDTVALLQTRLAEMPAVE 252

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               G ++ N N   GT  G  G KTGFT A+    V +A +  + L+  ++G      R
Sbjct: 253 GRHPGFQFHNQNPLAGT-PGNLGGKTGFTDAARHTFVTAAERDGRRLVVSVMGTESVPLR 311

Query: 253 NKV-SASLLSMGFY 265
               +ASLL  GF 
Sbjct: 312 AADQAASLLDWGFA 325


>gi|319779426|ref|YP_004130339.1| Murein-DD-endopeptidase [Taylorella equigenitalis MCE9]
 gi|317109450|gb|ADU92196.1| Murein-DD-endopeptidase [Taylorella equigenitalis MCE9]
          Length = 389

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 11/239 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-K 84
                  ++  +   +  +   +     AS++KLMTAYVV    +     L   ITIS +
Sbjct: 143 INSEIALVMSLDDRQIQYQKNINVVQPIASISKLMTAYVVIKSGQP----LDEIITISEE 198

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +      + S    G+ +T   AL L ++ S N  A A+        + FV+ MN T+++
Sbjct: 199 DVDHLKGTGSRLTIGTQLTRKEALLLALMSSENRAANALGRHYPGGLEAFVKEMNATARS 258

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAI----LSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           LG++ T ++   G+    + ++A+D+A     +              + +     K + Y
Sbjct: 259 LGMTRTRYVEPTGL-SPMNVSSAQDLATLLAAVYKEPLIHQLSTSDGYSVTTNGGKVQDY 317

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
            N+N  +          KTG+   +G  IV       + +  V++ A    TR   +  
Sbjct: 318 KNSNRLIRNNEWDIHISKTGYIKEAGRCIVMITKIKGKDMAVVLMNAKGGTTRFSDAIR 376


>gi|260219749|emb|CBA26593.1| hypothetical protein Csp_H39370 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 364

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/132 (33%), Positives = 68/132 (51%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           M   +              Y LLD  +  ++A    D P  PASLTKLMTAY+VF  L+ 
Sbjct: 1   MSFAVAAQAPRPPEVAARAYLLLDVTSNQILASKDMDMPVEPASLTKLMTAYLVFDALRS 60

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
           KK  L     +S+ A + P S         + +++ +K +IV+S ND  +A+AE +  + 
Sbjct: 61  KKIDLKQTFPVSERAWKMPGSRMFIDPKMQVPVEDLIKGMIVQSGNDATMALAEGVGGSL 120

Query: 132 KKFVQHMNNTSK 143
           ++FVQ MN+ +K
Sbjct: 121 ERFVQMMNDQAK 132


>gi|46205327|ref|ZP_00209803.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 261

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 72/130 (55%)

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN T+  +G+  + + N +G+ +   +T+ARDMAIL+  +  DFP     F I  ++  
Sbjct: 1   MMNETAHKIGMRESRWYNPNGLPEPRQWTSARDMAILARALMRDFPDQQGLFSISAIQYG 60

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                N N  +G + GADGMKTGF C+ GFN+VA+A +  + +I V++G      R+  +
Sbjct: 61  KAVMANHNGLLGRYPGADGMKTGFICSGGFNVVATATRNGRRIITVVMGQPSARERDIKA 120

Query: 257 ASLLSMGFYN 266
           A L   GF  
Sbjct: 121 ADLFDYGFSQ 130


>gi|145594991|ref|YP_001159288.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora tropica
           CNB-440]
 gi|145304328|gb|ABP54910.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora tropica
           CNB-440]
          Length = 386

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 98/283 (34%), Gaps = 8/283 (2%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                    A       + + D  +G V+    P     PAS+ KL+ A  +   L    
Sbjct: 56  LVTPAGTPSAPAVTATSWIVADLGSGQVLGGCGPHEHRTPASVQKLLLAVALLPRLDPTT 115

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
            +  T   +                  T+       LL   +     +A           
Sbjct: 116 VVEVTRDDLHDLDPASSLMGVVEGGRYTVEELWLGLLLESGNDAANVLARLGGGGAGRPG 175

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
            VQ MN+ +  L  S TH +   G+   G YT+A D+A+++     +   +  Y   +  
Sbjct: 176 GVQVMNDEAGRLRASQTHAVTPSGLDGAGQYTSAYDLALIAR-AAFERDDFRRYIATRTA 234

Query: 194 EIKGKK------YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +              N  +G++ G  G KTGFT  +    V  A +  ++L   +LGA 
Sbjct: 235 SLPSTPGRSALALTGDNTLLGSYPGMLGGKTGFTDLARQTYVGVAERDGRTLAVTLLGAE 294

Query: 248 DRN-TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
           +        + +LL+ GF    D    + +  D  +++ + + 
Sbjct: 295 NAPLGSLGEATALLNWGFALAPDEAVGHLVTPDQGKKDENKDK 337


>gi|167465655|ref|ZP_02330744.1| serine-type D-Ala-D-Ala carboxypeptidase [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 275

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 14/163 (8%)

Query: 185 MHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               +   +           N N+    + G DG+KTG T  +G+    +A +GD  LI+
Sbjct: 69  RETDKTPMINFNWMLEGNKGNINFKPYAYDGLDGLKTGHTNEAGYCFTGTAQRGDMRLIS 128

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           V++G      R + +  +L  GF N   RK ++       +Q        + +E+    K
Sbjct: 129 VVMGTNSEPKRFQETRKVLDYGFNNFEMRKVLDAN-APVEEQKTVKISKGVKKEIEAGVK 187

Query: 302 EIINYNTQMKEAKDKES----------HFIDFEKITLLKNKIT 334
           E +++  +      K +               +K   +     
Sbjct: 188 EPVSFVVKKGSGDVKVTGKVDPVSDKDLVAPIKKGDKVGTATL 230


>gi|291563266|emb|CBL42082.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SS3/4]
          Length = 322

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 24/271 (8%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A L+ +    S+ ET       +   + G+ +         NPAS TK+MTA +   +
Sbjct: 54  FAADLAVVTDETSVDETLTAESAGVFPLDGGNAVFAQDVFERRNPASTTKVMTALIALKY 113

Query: 69  LKEKKAMLTTPITISKNASEYPPSNST--FKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                  L   +T+ + +      +S      G  +TL+  L  L++ S ND A AIA  
Sbjct: 114 -----GNLDDVVTVPQESVITESGSSMAGVVPGDKLTLEQLLYGLLIPSGNDAANAIAVH 168

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  + + FV+ MN  +  +G + THF NA+G+    HY TA D+ ++       + ++  
Sbjct: 169 MGGSIEGFVKMMNEEAVQIGATGTHFANANGLTNADHYMTAYDLYLMFHEAL-KYEKFRD 227

Query: 187 YFQIKGLEIKG-----------KKYPNTN----WAVGTFLGADGMKTGFTCASGFNI-VA 230
               K                     N        +   L   G KTG T A+G+ + + 
Sbjct: 228 IIGTKTYTASYKGADGSDKTASWSVSNYYMLGKREMPDGLSVFGGKTGTTQAAGYCLIMG 287

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
               G +   +V++ A  R+      ++++ 
Sbjct: 288 ETDAGGKEYASVVMHADSRDALYSDMSTIIE 318


>gi|210612733|ref|ZP_03289448.1| hypothetical protein CLONEX_01650 [Clostridium nexile DSM 1787]
 gi|210151426|gb|EEA82434.1| hypothetical protein CLONEX_01650 [Clostridium nexile DSM 1787]
          Length = 324

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 22/249 (8%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L   +   V    +      PAS TK++T Y+   +       L+  +T+SKNA   
Sbjct: 74  AAALFGVDQKKVFLSEHMHDRLFPASTTKILTLYLALKY-----GTLSDEVTVSKNAVSV 128

Query: 90  PPSNSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           P  +S    ++G  +TL++ +  L++ S ND AVAIAE +  +   FVQ MN  +  LG 
Sbjct: 129 PSDSSVAGLREGEQLTLEDLVYGLMLPSGNDSAVAIAEHISGSVDAFVQLMNQEANALGA 188

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF--------PQYMHYFQIKGLEIKGKK 199
           + +HF+N HG     HYTTA D+ ++  +   +         P Y    +     ++   
Sbjct: 189 TNSHFVNPHGYHDKDHYTTAYDLYLIFNQGIQNEKFVDIISSPSYTTDIKEPDGSVRSVT 248

Query: 200 YPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGD-QSLIAVILGALDRNTR 252
           +  +N            +   G KTG T  +G  +V        +  I+V++GA  +N  
Sbjct: 249 WRQSNLFVNGTRTAPENVTVVGGKTGTTDEAGACLVLYEQDSQSRPYISVVMGAESKNAL 308

Query: 253 NKVSASLLS 261
                SLLS
Sbjct: 309 YTTMDSLLS 317


>gi|293375518|ref|ZP_06621795.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sanguinis
           PC909]
 gi|292645858|gb|EFF63891.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sanguinis
           PC909]
          Length = 324

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 14/248 (5%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D     +I E  PD    PASLTK+MT  V    +     ++         
Sbjct: 75  IYSSNAILVDLTANEIIYERNPDVITYPASLTKMMTVLVAIENMPNTPMVVDVDF---NK 131

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             E   + + F  G  ++ D+ L   ++ S  D A  +A  +  +E+ FV+ MN  ++ L
Sbjct: 132 LYEEGAALAGFSNGQVVSGDDLLYGTMLPSGADAAQTLANYVAGSEEAFVELMNQKAREL 191

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHYFQIKGLEIKGKKYPNT 203
           G+++THF N  G+    HY+T RDMA+L      +  F +                + + 
Sbjct: 192 GMTSTHFTNVTGLHDDNHYSTVRDMAVLVKAALYNDKFREVYSAKSYVTSTTPMLVFTSR 251

Query: 204 NWAVGTFLG-----ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNK 254
            +   +          G KTG+T  +   + + A  G      V   A            
Sbjct: 252 MFDRLSSPTFGRVEMLGGKTGYTHEAQLCLASYATDGKHEYALVTTHADGSAYTPQYHVL 311

Query: 255 VSASLLSM 262
            +  L + 
Sbjct: 312 DAVYLYNY 319


>gi|313472221|ref|ZP_07812713.1| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           1153]
 gi|313449097|gb|EEQ68608.2| D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus jensenii
           1153]
          Length = 313

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 102/292 (34%), Gaps = 30/292 (10%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           ++D  TG ++ +      +  ASLTK++T  V+   + + K      I ISK+ ++    
Sbjct: 1   MMDEKTGQILYQRNATKKYAVASLTKILTLAVIMEDIHKHKLDWDQEIQISKDVAKVADD 60

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLS 148
                          ++ LI       A    E    +   +   F   M   +K  G+ 
Sbjct: 61  WHFSNVPLVYNERYTVRSLIESMMIVSADGSTEALALADAGSVAAFNYKMKVVAKRAGVK 120

Query: 149 ATHFMNAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
                N  G+                  +  +A+DMA++S  +   +P+ ++  + K   
Sbjct: 121 NPEIYNMIGLSNGELGDLKLPKIDDNQENQFSAKDMALVSKYLIDKYPEVLNITKTKYAN 180

Query: 195 IKGKKYPNTNWAVGTFL-----------GADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            K ++          ++             DG+KTG T A+G+  V +    ++ +I V+
Sbjct: 181 FKIRQDNEMKMENIIYMLEGMGYGPKKGTMDGLKTGKTDAAGYCYVGTGTFDNRRVITVV 240

Query: 244 LGALDRNT-RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           L      + +   + +++   F      K     +   YQ+          +
Sbjct: 241 LDVPGEYSNQFIQTNNMIDTVFDKYQLVKVDKNNLPKKYQKITITSKKQKRK 292


>gi|325840226|ref|ZP_08166993.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
 gi|325490374|gb|EGC92699.1| serine-type D-Ala-D-Ala carboxypeptidase [Turicibacter sp. HGF1]
          Length = 324

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 14/248 (5%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D     +I E  PD    PASLTK+MT  V    +     ++         
Sbjct: 75  IYSSNAILVDLTANEIIYERNPDVITYPASLTKMMTVLVAIENMPNTPMVVDVDF---NK 131

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             E   + + F  G  ++ D+ L   ++ S  D A  +A  +  +E+ FV+ MN  ++ L
Sbjct: 132 LYEEGAALAGFSNGQVVSGDDLLYGTMLPSGADAAQTLANYVAGSEEAFVELMNQKAREL 191

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHYFQIKGLEIKGKKYPNT 203
           G+++THF N  G+    HY+T RDMA+L      +  F +                + + 
Sbjct: 192 GMTSTHFTNVTGLHDDNHYSTVRDMAVLVKAALYNDKFREIYSAKSYVTSTTPMLVFTSR 251

Query: 204 NWAVGTFLG-----ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNK 254
            +   +          G KTG+T  +   + + A  G      V   A            
Sbjct: 252 MFDRLSSPTFGRVEMLGGKTGYTHEAQLCLASYATDGKHEYALVTTHADGSAYTPQYHVL 311

Query: 255 VSASLLSM 262
            +  L + 
Sbjct: 312 DAVYLYNY 319


>gi|145505585|ref|XP_001438759.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405931|emb|CAK71362.1| unnamed protein product [Paramecium tetraurelia]
          Length = 360

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 98/249 (39%), Gaps = 15/249 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + + + NTG  I     +     AS+TK++T  +        +  L   I  +
Sbjct: 105 FKVSAQSWAIFNGNTGEYITGYNQNKCRQIASITKIVTCII--ENAFLFQIKL---INQT 159

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT---EKKFVQHMNN 140
           K A +   +++   KG ++ L + L  L++ S ND AV ++ +          F++ MN 
Sbjct: 160 KQAQKISGTSAGLLKGDSIFLRDLLYGLMLPSGNDAAVTLSYNFQLYSLENDHFLKEMNR 219

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP-------QYMHYFQIKGL 193
             + LGLS T F N HG+    +++TA D+   ++    +         Q         L
Sbjct: 220 FVQALGLSNTQFSNVHGLCNENNFSTAYDVGKFTYESLQNEQFQKIVRTQSYFCETPNQL 279

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           +   ++    N       G  G+KTG T  +G ++V        S I V+L       R 
Sbjct: 280 QNTSRELYWENTNKLLQQGFKGVKTGITKEAGPSVVEYFQDSTNSYIIVLLNCSSSENRW 339

Query: 254 KVSASLLSM 262
             +  LL  
Sbjct: 340 TDALRLLQW 348


>gi|254468773|ref|ZP_05082179.1| penicillin-binding protein 7 [beta proteobacterium KB13]
 gi|207087583|gb|EDZ64866.1| penicillin-binding protein 7 [beta proteobacterium KB13]
          Length = 285

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 17/274 (6%)

Query: 2   RQFLVIIAMAMLSNIF-------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           ++ +  + + +++N                T K P   + D ++G +I +   +     A
Sbjct: 3   KRLVATLFILLINNFAFAEYFDYSKYYNQLTIKSPKAIIYDADSGDIIFQKKANEKSAIA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           SLTKLMTA V+          L   + I+ K+      + S    GS +T    L + ++
Sbjct: 63  SLTKLMTAMVLIDS----NLDLNEKVKITKKDQDRIKGTKSRLWLGSELTRKELLSIALI 118

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S N  A A++ S    +K FVQ MN  +K LG+  T F +  G+ ++   T    + + 
Sbjct: 119 ASDNRAASALSNSYPGGKKAFVQAMNVKAKQLGMDDTSFADPTGLDKNNISTAIDLVKMT 178

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCASGFNI 228
               +    + +         IK KK    Y NTN  V   L   D  KTG+   +G  +
Sbjct: 179 QAAQQYPIIRELSTSSYYEAYIKNKKIRLNYNNTNLLVRQGLWDIDISKTGYIREAGKCL 238

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +      D+ +I V L +  + TR   +  +   
Sbjct: 239 IMQTKVMDKPIIMVFLKSYGKYTRTADAKRVKKW 272


>gi|268607994|ref|ZP_06141725.1| hypothetical protein RflaF_00660 [Ruminococcus flavefaciens FD-1]
          Length = 364

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 11/245 (4%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
           A+        L++ +   +IA N   +   PASLTK+MT  V     ++    +     +
Sbjct: 99  AKEFDARNAILINADQNEIIAYNGERYRMYPASLTKVMTLIVAVENAEDLHDTVLITDKM 158

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                E   S + F  G T +++  L  +I+ S  D A A+A+ +  +EKKFV+ MN  +
Sbjct: 159 VTPYIEQDASRAGFLPGETPSVEALLYGMILNSGADAASAVAKYVAGSEKKFVELMNKKA 218

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-------YMHYFQIKGLEI 195
           + +GL ATHF N  G+    HY+TA DMA++      +             + + +    
Sbjct: 219 EEMGLYATHFTNVVGLHDPQHYSTAEDMAMILKYAIGNKTCKKILSAYEYKFPETEQNPE 278

Query: 196 KGKKYPNTNWAVGTFLG----ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                      +           G KTGFT  +G  I + A+   ++ I V+ G      
Sbjct: 279 GLTFTSTLFTRMYGDEIDGVKILGGKTGFTDKAGNCIESFAVINGETYILVLCGGTTNWN 338

Query: 252 RNKVS 256
               +
Sbjct: 339 MVYDT 343


>gi|302335807|ref|YP_003801014.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Olsenella uli
           DSM 7084]
 gi|301319647|gb|ADK68134.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Olsenella uli
           DSM 7084]
          Length = 305

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/261 (21%), Positives = 93/261 (35%), Gaps = 18/261 (6%)

Query: 5   LVIIAMAMLSNIFPFLSI-------AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           L++  +A+     P +             +     + D      +     D    PASL 
Sbjct: 23  LLLSTVALACAAGPAVLQEGRRPLHPGAWRSQSVYVYDVTDDREVISVNGDQRRAPASLA 82

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KLMT YV    + +  ++          A     S + F  G   T  + +   ++ S  
Sbjct: 83  KLMTTYVALRHVDDLSSLAPVSSEAYARAVTGNCSMAGFVPGERTTFRDLMYATMLVSGG 142

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           + A+++AE+ C +    V  MN  +   GL  T + N  G+   G +TTARD+A L    
Sbjct: 143 EAAMSLAENACGSTDACVAEMNEVAGQWGLRDTSYRNVEGLDAEGQHTTARDVASLVRHA 202

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYP-------NTNWAVGTFL----GADGMKTGFTCASGF 226
             D      +   +        +P            +G +        G K+G T  +G 
Sbjct: 203 LEDGNFRTLFCTPQFGSSPTTAHPDGVLLESTVLSKLGRYDTRGFTILGGKSGTTGDAGL 262

Query: 227 NIVASAIQGDQSLIAVILGAL 247
                A +G    I V++GA 
Sbjct: 263 CWATLAEKGGHRYIVVVMGAP 283


>gi|257065656|ref|YP_003151912.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Anaerococcus
           prevotii DSM 20548]
 gi|256797536|gb|ACV28191.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Anaerococcus
           prevotii DSM 20548]
          Length = 288

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 18/262 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           +++++++ + ++  I     +        E +K     + +      +     + P   A
Sbjct: 3   KKYIILLGLCLIFLIGGLNFVKRDSKFDLEDSKSKAVYIYNLTDDKKVYGKNENKPLPMA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           SLTK+MT  V    +     +          A     S + F    T T  + +   I+ 
Sbjct: 63  SLTKIMTLLVSLDHVSNLGELAPIDYDSYMRAVSENASMAGFLANETTTYRDLMYGTILA 122

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           S  + A ++A ++  +   FV  MN     L L  T + NA G+    ++ +A+D A+L 
Sbjct: 123 SGAEAADSLAINVAGSIDSFVDLMNEKVGELNLENTSYANADGMDDRRNFQSAKDCAMLI 182

Query: 175 WRIKTD-------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCA 223
                D         +                       +  +        G K+G T  
Sbjct: 183 KYGLEDGNFRAIFTKRDYLSQATNEHPDGVYIESTIFSHLKDYEENGFEIIGGKSGTTDE 242

Query: 224 SGFNIVASAIQGDQSLIAVILG 245
           +G      A +  +  I V++G
Sbjct: 243 AGLCWATLAEKDGKEYIIVVMG 264


>gi|291522262|emb|CBK80555.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus catus GD/7]
          Length = 327

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 85/253 (33%), Gaps = 19/253 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK--EKKAMLTTPITI 82
                   L  T    VI          PAS+TK++TA V    ++  +++  LT  + +
Sbjct: 74  QLDAKEIFLTGTTDKTVITAKNIYTQMPPASITKILTALVALENVQDLDQEVTLTDDVNV 133

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
               ++     +               +LI    +      +         F   MN  +
Sbjct: 134 DVADAQVCGFKAG---DKMTLKTLLYCMLIYSGNDAANAVASAVSGGDIPAFCDKMNAEA 190

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSW------------RIKTDFPQYMHYFQI 190
           + LG + THF+  +G+    HYTTA D+ ++                      +    Q 
Sbjct: 191 QRLGATQTHFVTPNGLDDPDHYTTAYDLYLIFNECLKYDLFKDAIHQAHYTAVFTRNGQE 250

Query: 191 KGLEIKGKKYP-NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALD 248
                    Y    N      +   G KTG T  +G  ++     G     I+V+LG  D
Sbjct: 251 VQQTYDSTNYYLLGNKTPPEGVSIIGGKTGTTDNAGLCLILYVEDGSGNGYISVLLGCPD 310

Query: 249 RNTRNKVSASLLS 261
           ++T     + LLS
Sbjct: 311 KDTLYSSMSKLLS 323


>gi|315924182|ref|ZP_07920408.1| serine-type D-Ala-D-Ala carboxypeptidase [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622584|gb|EFV02539.1| serine-type D-Ala-D-Ala carboxypeptidase [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 454

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 70/282 (24%), Positives = 114/282 (40%), Gaps = 37/282 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M  F++I+  A+++ +  + ++           ++  +G VI          PAS TK+M
Sbjct: 1   MAVFVLILTFAVVTCLPAYAAMPSYTGDEAVYAVEEKSGDVITAQNEHKRMYPASTTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPS--NSTFKKGSTMTLDNALKLLIVKSAND 118
           T  V   ++ +    +   + I    S        +  KKG T T       L++ S ND
Sbjct: 61  TTLVALDYVAD---KMDQQVKIGDEVSLITADSSKADLKKGDTCTWRQLFYGLLLPSGND 117

Query: 119 IAVAIAES------------LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            A+AIA++              K   KFV  MN  +  L L  +HF+N HG+    HYTT
Sbjct: 118 AALAIAKNIGRAASGDRELGTDKAIDKFVSLMNRKAAQLQLEDSHFVNPHGLHDANHYTT 177

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGKKYPNTN-----------------WA 206
           A D+  +S     +                +   KK+ NTN                   
Sbjct: 178 AADLEKISAAALENPTIRKIVQTKVYSCKLKSGQKKWINTNSLIISTNDLAKVRESSHNG 237

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                 A G+KTG T  +G  +V S+  GD++++AVIL + +
Sbjct: 238 KQYNPYATGVKTGHTDEAGRCLVFSSKDGDKTMVAVILHSDN 279


>gi|229030194|ref|ZP_04186253.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1271]
 gi|228731112|gb|EEL82035.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1271]
          Length = 274

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 16/193 (8%)

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-----KKYPNTNWA----VG 208
                +  +ARD AIL+ R+  DFP+ +   +I     +          N NW     + 
Sbjct: 26  TPDEKNKMSARDCAILAQRLIQDFPKMLDTAKIPKKTFQQGGKYPIDMTNFNWMLKGLIK 85

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG T  +G     +  +    LI+V++ A     R   +  L   GF N  
Sbjct: 86  QYEGVDGLKTGTTPEAGDCFTGTVERNGMRLISVVIKANSHAARFDETKKLYDYGFANFE 145

Query: 269 DRKKINYIIKDFYQQ-------NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
            +K           +          + V    + V     +      + +     E    
Sbjct: 146 VKKAYGKDSVVKGYETVRVANAKDKDVVVQTKQAVSLPIPKNNKDVYKKEFKVLNEEQEA 205

Query: 322 DFEKITLLKNKIT 334
             +K   +   I 
Sbjct: 206 PIKKGVTISKMII 218


>gi|294781926|ref|ZP_06747258.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp.
           1_1_41FAA]
 gi|294481737|gb|EFG29506.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp.
           1_1_41FAA]
          Length = 435

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 10/240 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + D N G+VI     D  +  AS+TK+M+  V F  +      L   + ISK   +
Sbjct: 181 RAVLVGDLN-GNVIFSKNADTMYPLASVTKVMSLLVTFDEINAGNIGLHDSVRISKTPLK 239

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLG- 146
           Y  S    K+G    L++ +K   V SAN+   A+AE + + +   FV  MN   K LG 
Sbjct: 240 YGGSGIALKEGQIFILEDLIKASAVYSANNATYAMAEYVGEGSIFNFVAKMNKKLKQLGL 299

Query: 147 LSATHFMNAHGVVQHGHYTTARD------MAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +   +    G+          +        +    +K D    +   +   +       
Sbjct: 300 QNDIKYHTPAGLPTRNTKMPMDEGTPRGIYKLSIEALKYDKYIEIAGIKNTKIYNGKISI 359

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  +       LI V++G     TR+ +  +++
Sbjct: 360 RNRNHLIGE-DGVYGIKTGFHKEAKYNITVAVKFEGIDLIIVVMGGETYKTRDDLVRTII 418


>gi|313885620|ref|ZP_07819370.1| serine-type D-Ala-D-Ala carboxypeptidase [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619350|gb|EFR30789.1| serine-type D-Ala-D-Ala carboxypeptidase [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 449

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 105/306 (34%), Gaps = 32/306 (10%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++ I ++ L+                   +++ + G ++ E   D       L+KL+T Y
Sbjct: 14  IITIFISPLTTFAQARFDNFNVDQDLSAMVIEGHNGQILFEQNTDKLVEVGDLSKLLTLY 73

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDI 119
           +V   +K+    + T + IS  A     +               +++ ++ ++++SAN  
Sbjct: 74  LVLDAVKQGNISMDTEVPISDQAFYISQNYDINNVPLRQDYPYKVEDLIQAVVIQSANGA 133

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----------------- 162
            +A+A+ +   E KFV+ M        L+     NA G+ Q                   
Sbjct: 134 TLALAQLIEPDEGKFVELMRQQLSQWHLNDFEIFNATGMTQTQINDSYAPYTDDREKNKE 193

Query: 163 -HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI-----KGKKYPNTNW----AVGTFLG 212
            +  +   +A + + +   +P  ++Y Q                 N N         +  
Sbjct: 194 VNRMSTEVVATIVYHLMDVYPDILNYSQKDVDVFVKDSDDAFDMNNANLLVSGGEYNYDL 253

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           ADG+    +  +  +IVA+A +    +I + LG  D     +    L +  F        
Sbjct: 254 ADGLMVDDSHEAQASIVATAEKDGLRVIGISLGQEDPVAMYQDMIDLFNQSFSAYRLEAI 313

Query: 273 INYIIK 278
                 
Sbjct: 314 AKAGDP 319


>gi|46203464|ref|ZP_00208979.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 215

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 61/175 (34%), Gaps = 4/175 (2%)

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
             TARD+++L+  +  DFP+Y   F        G K  N N  +    GADG+KTG T A
Sbjct: 1   MMTARDLSVLARHLIGDFPEYYPLFSQMEFVFNGIKQGNRNPLLYNTPGADGLKTGHTEA 60

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF--- 280
           +G+ + AS  +G++ +I V+ G      R + S  L    F             +     
Sbjct: 61  AGYGLTASIKRGNRRIIMVLNGMSSMKERAEESRRLTEWAFREWETYALFKAGEEVIPDA 120

Query: 281 -YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKIT 334
                    VP + +       +  N                  +    +   + 
Sbjct: 121 EVWLGQKETVPLLVKNAVEVSMQRRNRLEMKVTTIYNGPIAAPIKAGQEVGKIVV 175


>gi|5759263|gb|AAD51058.1|AF175293_3 D,D carboxypeptidase [Enterococcus faecium]
          Length = 356

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 100/260 (38%), Gaps = 29/260 (11%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   +++ +T  V+ +        PAS  K++ A     +           + +  
Sbjct: 98  NITAANAIVMNKDTNEVLYQKKSTAQIAPASTAKMIMALTALDYC-----SPEDEMKVGA 152

Query: 85  NASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAES------------LCKT 130
                   +S     KG T+T+   L  L++ S ND A  +A +              + 
Sbjct: 153 EIEMIQSDSSTAWLMKGDTLTVRQLLIALMLPSGNDAAYTLAVNTGKKIAGDKSLTHQQA 212

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----H 186
            + F+  +N  + +LG + + F+   G    G YTTA D+AI++     +         +
Sbjct: 213 IEVFMDKVNEKAVDLGATNSKFIAPDGYDAEGQYTTAYDLAIIAKACLDNPIISEIVASY 272

Query: 187 YFQIKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               K    +   Y N+N      +        G+KTG +   G  IV++A+   ++ I 
Sbjct: 273 SSYEKWPNGREVTYSNSNELLDPNSPYYRPEVIGLKTGTSSLGGACIVSAAVIDGETYIC 332

Query: 242 VILGALDRNTRNKVSASLLS 261
           V++G+  + +R + S  +L 
Sbjct: 333 VVMGS-TKESRFQDSVDILD 351


>gi|218678836|ref|ZP_03526733.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli CIAT 894]
          Length = 168

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 79/165 (47%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M +    +    LS+     +           ++D  +G ++  +  D    PASLTK+M
Sbjct: 1   MTKMTSRLLATALSSAMVMGAFTAVQAGQASFVIDAQSGQILEASNQDELNYPASLTKMM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y+ F  L E +      +T+S+NA    P       G  +TL  A++ ++V SAND A
Sbjct: 61  TLYLAFEALHEGRLKWDQKLTMSENAESKEPFKLAIGAGRQVTLREAVESIVVLSANDSA 120

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           VAIAE L  +E+ F + M + ++ LG++ T F N  G+      T
Sbjct: 121 VAIAEQLGGSEQAFAKTMTDKARQLGMTNTVFKNPSGLPDPEQVT 165


>gi|296877208|ref|ZP_06901248.1| DD-carboxypeptidase [Streptococcus parasanguinis ATCC 15912]
 gi|296431728|gb|EFH17535.1| DD-carboxypeptidase [Streptococcus parasanguinis ATCC 15912]
          Length = 440

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 36/336 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           K     ++D NTG ++  +  D   +  S+ KLM+AYVVF  LKE K    T +T ++  
Sbjct: 61  KPKADIVIDANTGAILYGDNIDTVRDSGSMAKLMSAYVVFRALKEGKIKYDTVVTATEAD 120

Query: 87  SEYPPS----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNT 141
                +    NS    G    +   +K+L V S++   + +A +       KF+  MN  
Sbjct: 121 QAISENNLLSNSPIVAGVDYKVSELIKMLFVPSSSAAVIMLANAVTDNDPDKFLDLMNQY 180

Query: 142 SKNLGLSATHFMNAHGVV---------------QHGHYTTARDMAILSWRIKTDFPQYMH 186
           S+ +G+S T + N +G +                  +  TARDM+IL++ I  D P+ + 
Sbjct: 181 SQEMGMSHTKWHNPNGAMISVLQGYYNPQRYDVNANNEITARDMSILAYHIVNDLPEMLE 240

Query: 187 YFQIKGLEIKGKK-----YPNTNWAVGTF----LGADGMKTGFTCASGFNIVASAIQGDQ 237
           Y +     I         Y N N ++        G DG+KTG +  + +N  A+  +G Q
Sbjct: 241 YTKQAHTTIMEGTPYEQSYDNYNTSLEGGKFALKGTDGLKTGSSPTADYNYTATTKRGKQ 300

Query: 238 SLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPN 291
            +I VILG  + +       RN++  +L    F +   +K ++   +            +
Sbjct: 301 RIIEVILGVGNYDVEIAESYRNQIGNTLAEKMFADYQYKKVLSAG-EHKIDGKTIQLKQD 359

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
               V    K  +         ++         K  
Sbjct: 360 FYATVKKGTKPALKLEDNRLVVQNGLQQVSPSIKAG 395


>gi|145510915|ref|XP_001441385.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408635|emb|CAK73988.1| unnamed protein product [Paramecium tetraurelia]
          Length = 334

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 102/266 (38%), Gaps = 24/266 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + +++   G  +           ASLTKLMT YV    +++ K  L   + +S
Sbjct: 66  PLVTAQNFIVMNGIDGQHLTNFNSKKRVQVASLTKLMTCYVAIQLIRDLKLNLYQIVYVS 125

Query: 84  KNAS-------EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK--- 133
            +         +   +++       +TL + L  L++ S ND A  IAE+L +  K    
Sbjct: 126 YDVYILTFKAVQISGTSAFLHPYDRITLYDLLHGLMLPSGNDAANVIAENLSQCVKDPVS 185

Query: 134 ----------FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
                     F+  MN  +  L ++ T F N HG+     Y+ A D+AIL  +I  D   
Sbjct: 186 NIALHYRIQPFISLMNQYALQLEMNDTQFYNPHGLSNDQSYSCAEDLAILCKQIINDPML 245

Query: 184 YMHYFQIKGLEIK---GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
                + +           + NTN  +  + G  G KTGFT  +G  +          LI
Sbjct: 246 MEIVNKKEHQATNKLINLTWKNTNR-MLEYEGYCGFKTGFTNKAGPCLATLFKNDQICLI 304

Query: 241 AVILGALDRNTRNKVSASLLSMGFYN 266
            +IL  L +  R   +  L +     
Sbjct: 305 IIILNCLSKEVRWDDTIKLSNWAQRK 330


>gi|164686861|ref|ZP_02210889.1| hypothetical protein CLOBAR_00457 [Clostridium bartlettii DSM
           16795]
 gi|164604251|gb|EDQ97716.1| hypothetical protein CLOBAR_00457 [Clostridium bartlettii DSM
           16795]
          Length = 520

 Score =  103 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 23/344 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           R   + +++ ML +   F++ A       T     YT++D N+G +I     +    PAS
Sbjct: 6   RIIAIFLSLMMLISSGIFVNNAHAAQAKPTVYAHSYTVMDANSGEIIISEQENKRIYPAS 65

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             KL+TA V             T    + N  +   + +  K G   TL+  L +L+V S
Sbjct: 66  TIKLLTAIVAIEN--CSLYKRITVKKSTLNKVDVETTTAGLKPGYAYTLEELLNMLLVYS 123

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH---YTTARDMAI 172
           A D A  IAES+  T + FV+ MN  +K LG++ ++F N  G+  H +   Y+T+ D+A 
Sbjct: 124 AGDAAEIIAESVGGTRENFVEMMNIRAKELGMNDSYFDNPVGMDWHKNANIYSTSSDIAK 183

Query: 173 LSWRIKTDFPQYMHYFQIK-----GLEIKGKKYPNTNWAVGTFLG------ADGMKTGFT 221
           L+    T+        + +       + K K    +N  +  +          G KTG +
Sbjct: 184 LTRYAMTNDTIRAIVKKPQYVIKNYYKGKSKTLYASNNFLRNYSYSKNLFTIIGSKTGTS 243

Query: 222 CASGFNIVASAIQ-GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
             +G+ + A+A     + +I    G   R    +   +LL+  F N  +  + ++    +
Sbjct: 244 DKAGYALSATARDSSGREVICAFFGKSTRMQMFQDINTLLTYTFNNYKNILEKSFYDIRY 303

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
                       +  +  T     + +TQ+ + +   +     +
Sbjct: 304 SSTKTIINKYLANGVLTMTSSGKFSGSTQVSKKEFVTTTNKALK 347


>gi|298526808|ref|ZP_07014217.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298496602|gb|EFI31896.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 330

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 88/232 (37%), Gaps = 12/232 (5%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
            VIA   P     PAS+ K++ A             L   +  + + +    +      G
Sbjct: 31  RVIAARDPHGRHRPASVIKVLVAM-----ASINTLTLNKSVAGTADDAAVEGTKVGVNTG 85

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T T++  L  L++ S ND A A+A  L        + +N  +  LG   T      G+ 
Sbjct: 86  GTYTVNQLLHGLLMHSGNDAAYALARQLGGMPAAL-EKINLLAAKLGGRDTRVATPSGLD 144

Query: 160 QHGHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
             G  T+A D+ +       +           +      +  G +  N N  +  + GA 
Sbjct: 145 GPGMSTSAYDIGLFYRYAWQNPVFADIVATRTFDFPGHGDHPGYELENDNQLLYNYPGAL 204

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVIL-GALDRNTRNKVSASLLSMGFY 265
           G KTG+T  +G   V +A +  + L+ V+L G        + +A LL  GF 
Sbjct: 205 GGKTGYTDDAGQTFVGAANRDGRRLMTVLLHGTRQPIPPWEQAAHLLDYGFN 256


>gi|167835875|ref|ZP_02462758.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 369

 Score =  103 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++     +     +     ++D  TG  + E   +     AS+TKLM + V       
Sbjct: 113 LLASCGYTAASRRLLRSRAIYVVDERTGTALIEKNANRVVPIASVTKLMMSMVALDTRAP 172

Query: 72  KKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L     +S ++      + S  K GS ++  + L + ++ S N  A A++      
Sbjct: 173 MSRPL----RVSAQDRDYEKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 228

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS---WRIKTDFPQYMHY 187
              FV  MN  ++ LG+  THF+NA G+    + +TARD++ L     R           
Sbjct: 229 RPAFVAAMNRKARTLGMKRTHFVNATGL-SPRNVSTARDLSRLVAAANRYPHIKTFSTDT 287

Query: 188 FQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            +         +Y N+N             KTGF   +G  +V       + +  V+LGA
Sbjct: 288 SKTVFPNRGELRYVNSNALVRAGDSSIVLQKTGFINEAGHCVVLRYAVRGRPVDIVLLGA 347

Query: 247 LDRNTRNKVSASLLSM 262
              +     +A +   
Sbjct: 348 PGPHDHVADAAKIRRW 363


>gi|167749407|ref|ZP_02421534.1| hypothetical protein EUBSIR_00361 [Eubacterium siraeum DSM 15702]
 gi|167657579|gb|EDS01709.1| hypothetical protein EUBSIR_00361 [Eubacterium siraeum DSM 15702]
          Length = 349

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA-SE 88
                D   G VI          PAS TK++TA     +   +          S+     
Sbjct: 87  AAICYDLTDGKVIYSKNAGKKVFPASTTKILTALTAIEYTAPEY----EYYVGSELGLVA 142

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKKFVQH 137
              S S   +GS++  +  L  ++  S ND A  IA +                  F   
Sbjct: 143 QDSSMSWIAEGSSLCRNEILTAMLAPSGNDAAYTIAVNVARKLYGDDISDNDAVAYFAVL 202

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN+ +K LG   THF    G     HYTTA DM          R   D         +  
Sbjct: 203 MNDYAKKLGAKNTHFTVPDGYHDDEHYTTAEDMLQFAIAATQSRTICDITCQ-PLAIVYD 261

Query: 193 LEIKGKKYPNTNW---AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +     + N N             GMKTGFT  +GF  +  A    + ++ ++ G    
Sbjct: 262 EQGNVHSWDNGNKLLTDTTIPYEVYGMKTGFTDEAGFCFIGYAGMNGKKILTLVYGGE-V 320

Query: 250 NTRNKVSASLLSMGFYNKTD 269
             R   +  L+ +GF    +
Sbjct: 321 ENRYADTKKLMDLGFDIYDE 340


>gi|219668743|ref|YP_002459178.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
 gi|219539003|gb|ACL20742.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
          Length = 352

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 19/261 (7%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK-EKKAMLTTPITISKNAS 87
             Y +L+  TG  + E   D    PAS  KL+T  +V   L+ ++   L   + +     
Sbjct: 90  SSYLMLNLQTGERLLEKNGDTHRAPASTVKLLTGLLVHEKLQADELITLGEEVKV----- 144

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S   FK G  + + +    + V SAND A A+A +   T+++F+Q MN+ +  LG 
Sbjct: 145 --EGSVLGFKPGDKILVKDLFTAMYVYSANDAANALAVAAYGTKEQFIQAMNSYAAELGC 202

Query: 148 SATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
             + F  A G+     YTTA+D+AI+    +               ++  +  G K    
Sbjct: 203 QDSQFKTADGMPAEDQYTTAKDLAIIAAKVTETPVLMDYINQKKASVEWTDANGWKQVRE 262

Query: 201 -PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             NTN  +G + G  G+KTG T  +G  +V      D  L+ V+LG+     R   +  L
Sbjct: 263 ISNTNQLLGIYPGDQGLKTGTTTEAGQCLVTYITSEDGDLLLVLLGS---KQRYTDTVEL 319

Query: 260 LSMGFYNKTDRKKINYIIKDF 280
           L  G      R  +  I+   
Sbjct: 320 LDQGMAKIRTRSALKNILSSP 340


>gi|42781623|ref|NP_978870.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
 gi|42737546|gb|AAS41478.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus cereus
           ATCC 10987]
          Length = 253

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 16/250 (6%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++   +++ +    F         +     L+D ++G V+     + P   A+L
Sbjct: 4   LKKFAILLLSFVITVLIVLYFYLYVNGPIIQAKSAILIDAHSGEVVYTKNEETPIQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+    L E    L   + IS    +   S          T+ + L  L++   
Sbjct: 64  SKLMTEYIALEQLNEGNIQLDEVVKISNEVFQAETSPIQVTSKDKTTVRDLLHALLLTGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAI 172
           N  A+A+AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++A 
Sbjct: 124 NRSALALAEHIAGNEDNFTQLMNEKAKRLKLSQPSPFLNATGMNNDTNKLSTTTAIEVAK 183

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCAS 224
           L+  + TDFP  ++  ++   +   K     N     +         G DG++T F+   
Sbjct: 184 LATELVTDFPDVLNVTKLTSYQFSFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNG 243

Query: 225 GFNIVASAIQ 234
            ++ V++A +
Sbjct: 244 NYSFVSTAKR 253


>gi|89894320|ref|YP_517807.1| hypothetical protein DSY1574 [Desulfitobacterium hafniense Y51]
 gi|89333768|dbj|BAE83363.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 352

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 111/261 (42%), Gaps = 19/261 (7%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK-EKKAMLTTPITISKNAS 87
             Y +L+  TG  + E   D    PAS  KL+T  +V   L+ ++   L   + +     
Sbjct: 90  SSYLMLNLQTGERLLEKNGDTHRAPASTVKLLTGLLVHEKLQADELITLGEEVKV----- 144

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S   FK G  + + +    + V SAND A A+A +   T++KF+Q MN+ +  LG 
Sbjct: 145 --EGSVLGFKPGDKILVKDLFTAMYVYSANDAANALAVAAYGTKEKFIQAMNSYAAELGC 202

Query: 148 SATHFMNAHGVVQHGHYTTARDMAIL----SWRIKTDFPQYMHYFQIKGLEIKGKKY--- 200
             + F  A G+     YTTA+D+AI+    +               ++  +  G K    
Sbjct: 203 QDSQFKTADGMPAEDQYTTAKDLAIIAAKVTETPVLMDYINQKKASVEWTDANGWKQVRE 262

Query: 201 -PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
             NTN  +G + G  G+KTG T  +G  +V      D  L+ V+LG+     R   +  L
Sbjct: 263 ISNTNQLLGIYPGDQGLKTGTTTEAGQCLVTYITNEDGDLLLVLLGS---KQRYTDTVEL 319

Query: 260 LSMGFYNKTDRKKINYIIKDF 280
           L  G      R  +  I+   
Sbjct: 320 LDQGMAKIRTRSALKNILSSP 340


>gi|291532121|emb|CBK97706.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum 70/3]
          Length = 349

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA-SE 88
                D   G VI          PAS TK++TA     +   +          S+     
Sbjct: 87  AAICYDLTDGKVIYSKNAGKKVFPASTTKILTALTAIEYTAPEY----EYYVGSELGLVA 142

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKKFVQH 137
              S S   +GS++  +  L  ++  S ND A  IA +                  F   
Sbjct: 143 QDSSMSWIAEGSSLCRNEILTAMLAPSGNDAAYTIAVNVARKLYGDDISDNDAVAYFAVL 202

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN+ +K LG   THF    G     HYTTA DM          +   D         +  
Sbjct: 203 MNDYAKKLGAKNTHFTVPDGYHDDEHYTTAEDMLKFAIAATQSQTICDITCQ-PLAIVYD 261

Query: 193 LEIKGKKYPNTNW---AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +     + N N             GMKTGFT  +GF  +  A    + ++ ++ G    
Sbjct: 262 EQGNVHSWDNGNKLLTDTTIPYEVYGMKTGFTDEAGFCFIGYAGMNGKKILTLVYGGE-V 320

Query: 250 NTRNKVSASLLSMGFYNKTD 269
             R   +  L+ +GF    +
Sbjct: 321 ENRYADTKKLMDLGFDIYDE 340


>gi|330817941|ref|YP_004361646.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           gladioli BSR3]
 gi|327370334|gb|AEA61690.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           gladioli BSR3]
          Length = 411

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 100/255 (39%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++     +     +     ++D  TG V+ E         AS++KLMTA V       
Sbjct: 155 LLASCGYTPATKRLLRSRAIYVVDERTGTVLLERNASQIRPIASVSKLMTAVVSLDRHAP 214

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
               ++       +      + S  K GST++  + L + ++ S N  A A++       
Sbjct: 215 LARRISVTGA---DRDTIKFTGSRLKVGSTLSRRDMLHIALMSSENRAAAALSRDYPGGR 271

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS---WRIKTDFPQYMHYF 188
             FV  MN  ++ LG+S THF+NA G+    + +TARD++ L     R  T         
Sbjct: 272 PAFVAAMNRKARTLGMSNTHFVNATGL-SPRNVSTARDLSRLVAAANRYSTIRAFSTDRA 330

Query: 189 QIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
           QI         Y N+N    G        KTGF   +G  +V     G + +  V+L A 
Sbjct: 331 QIVRPGHGQLSYVNSNALVRGGDRRITLQKTGFINEAGHCVVMRYQIGARPVDVVLLDAP 390

Query: 248 DRNTRNKVSASLLSM 262
                   +  + + 
Sbjct: 391 GPRDHIADAIRIRNW 405


>gi|291558140|emb|CBL35257.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium siraeum V10Sc8a]
          Length = 349

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 87/260 (33%), Gaps = 26/260 (10%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA-SE 88
                D   G VI          PAS TK++TA     +   +          S+     
Sbjct: 87  AAICYDLTDGKVIYSKNAGKKVFPASTTKILTALTAIEYTAPEY----EYYVGSELGLVA 142

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKKFVQH 137
              S S   +GS++  +  L  ++  S ND A  IA +                  F   
Sbjct: 143 QDSSMSWIAEGSSLCRNEILTAMLAPSGNDAAYTIAVNVARKLYGDDISDNDAVAYFAVL 202

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKG 192
           MN+ +K LG   THF    G     HYTTA DM          +   D         +  
Sbjct: 203 MNDYAKKLGAKNTHFTVPDGYHDDEHYTTAEDMLKFAIAATQSQTICDITCQ-PLAIVYD 261

Query: 193 LEIKGKKYPNTNW---AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            +     + N N             GMKTGFT  +GF  +  A    + ++ ++ G    
Sbjct: 262 EQGNVHSWDNGNKLLTDTTIPYEVYGMKTGFTDEAGFCFIGYAGMNGKKILTLVYGGE-V 320

Query: 250 NTRNKVSASLLSMGFYNKTD 269
             R   +  L+ +GF    +
Sbjct: 321 ENRYADTKKLMDLGFDIYDE 340


>gi|227500757|ref|ZP_03930806.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus tetradius ATCC
           35098]
 gi|227217062|gb|EEI82420.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus tetradius ATCC
           35098]
          Length = 291

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 103/267 (38%), Gaps = 22/267 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----------ETNKLPYYTLLDTNTGHVIAENYPDH 49
           M++ + ++A+ +L  +                  ++       + +      +     D 
Sbjct: 1   MKKKIGVLALGVLIIVGLVFGKKYLSNKDERFHDDSFTSKAVYIYNLTDDKEVYAKNADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           P   ASLTK+MTA V    + +  A+         +A     S + F+   T T  + L 
Sbjct: 61  PLPMASLTKIMTALVSLEHITDLGALAPIDYDAYMDAVNANASMAGFRANETTTYRDLLY 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
             I+ S  +   ++A ++  +   FV+ MN+ +K L L+ T + NA G+    +Y +ARD
Sbjct: 121 GTILASGAEACDSLAINVSGSVDDFVRLMNDKAKELKLTNTSYANADGMDDEKNYQSARD 180

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-------NTNWAVGTFL----GADGMKT 218
            A+L      D      + + + L     ++P            +  +        G K+
Sbjct: 181 CAMLIKASLEDGNFRAIFTKKEFLSSPTNEHPDGLHIASTIFSHLKDYDENGFEIIGGKS 240

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILG 245
           G T  +G      A +  +  I V++G
Sbjct: 241 GTTDNAGLCWATLAKKDGKEYIVVVMG 267


>gi|315659824|ref|ZP_07912683.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Staphylococcus lugdunensis M23590]
 gi|315495112|gb|EFU83448.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Staphylococcus lugdunensis M23590]
          Length = 411

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 139/343 (40%), Gaps = 45/343 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI--------------AETNKLPYYTLLDTNTGHVIAENY 46
           ++ F++++ + M+ +     +               A+        +  T  G ++ + +
Sbjct: 4   IKGFVLLLCLCMMFSPLTTYAAKTPTQIAEAEKQHIAQHYNPKSMIVT-TQQGQILYDYH 62

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTM 102
                +PAS+TKLMT Y+V   + + K  LT  + +S   ++       +     KG T 
Sbjct: 63  QHDNVDPASITKLMTIYLVLDDIDKGKIKLTDEVKVSGRYAKMSRIPGLTTFPLIKGKTY 122

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-- 160
           T+   LK   + S+N   + +AE +      F   MN  ++ L +  THF N  G     
Sbjct: 123 TIQQLLKQGALASSNAAMLVLAEHIDGNSSDFTHRMNRKAQALHMRHTHFNNPSGADNRL 182

Query: 161 ------------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN---- 204
                       H   TTA+DMA+L+ ++    P+ +   ++   +  G    NTN    
Sbjct: 183 IKPFAPSQYKQQHFSKTTAKDMAVLTQQLVKQHPKVLKITRLTSDKQHGHMLKNTNLSLP 242

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSAS 258
                  GADG+KTG T   G+N+  +A Q +  + +V+           ++ R ++S  
Sbjct: 243 AQADGLAGADGLKTG-TSNHGYNLALTAKQNNLRIHSVLFQVQPFADERAKHVRQQLSNI 301

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK 301
           ++   F N   RK ++   +   Q  +     ++ + V    K
Sbjct: 302 MVRRAFKNYDYRKVLSKG-QHRIQGKMYYVKKDLYDVVPKDHK 343


>gi|114321496|ref|YP_743179.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227890|gb|ABI57689.1| murein-DD-endopeptidase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 327

 Score =  102 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 88/246 (35%), Gaps = 8/246 (3%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                   +   +  +TG  +     D P   ASLTKLMTA VV          LT    
Sbjct: 57  EPLQLASVHAAAVYLDTGERLVGKRADMPAPIASLTKLMTALVVVESGAPLDEWLT---I 113

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           + +  +    + S  +  S +     ++L ++ S N     +A         F+  MN  
Sbjct: 114 VPRQHAVTKNAYSRMRVDSRLPRGELVRLALMSSENLATYVLAHHHPGGRAAFIAAMNAK 173

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +K LG++ T F+++ G+      +    + +L+   + +  +     +      +G +Y 
Sbjct: 174 AKELGMTQTRFVDSSGLSVENVASANDLLKLLAAANEHEVIRDYSTTRYHTAHFRGPRYT 233

Query: 202 ----NTNWAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
               NTN  V       G  KTG+   +G  +   A    + +  V L +    +    +
Sbjct: 234 KGYANTNPLVAHSRWQVGLSKTGYLVEAGRCLAMVAEMEGRPVALVFLNSHGTRSPLGDA 293

Query: 257 ASLLSM 262
                 
Sbjct: 294 GRFRRW 299


>gi|160915010|ref|ZP_02077223.1| hypothetical protein EUBDOL_01017 [Eubacterium dolichum DSM 3991]
 gi|158432809|gb|EDP11098.1| hypothetical protein EUBDOL_01017 [Eubacterium dolichum DSM 3991]
          Length = 330

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 9/233 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           K   Y ++      V+ E       + AS++K+MTA +           L      S+  
Sbjct: 21  KAESYCVMSGEDQQVLEEKDMHKQQSVASISKIMTAMIAIEK-----GNLQDRWQCSEAI 75

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                S    +K   ++L++ L  L+++S ND AV IAE +   E+ FV  MN  +K +G
Sbjct: 76  ETVDGSMIYLQKDQMVSLESLLYGLMLRSGNDAAVEIAEHVGGNEENFVAMMNEKAKEIG 135

Query: 147 LSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG-KKYPNT 203
           +S T F N  G+     G+ +TA DMA+L      +   +      K    +   ++ N 
Sbjct: 136 MSRTLFRNPTGLDEKDGGNVSTAYDMALLMSYALKN-RTFRKIAGTKYYTSEWNYRWKNK 194

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
           N  + ++  +   KTGFT  +G  +V SA       I V L   D    ++ +
Sbjct: 195 NRLLFSYDKSTAGKTGFTKQAGRTLVTSAKNKQLESIVVTLDMHDDFRFHEQA 247


>gi|324120501|dbj|BAJ78640.1| penicillin binding protein 4 [Staphylococcus epidermidis]
          Length = 411

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 153/375 (40%), Gaps = 51/375 (13%)

Query: 1   MRQFLVIIAMAML------SNIFPFLSIAETNKLPYYT---------LLDTNTGHVIAEN 45
           M++  +I+ ++++      +NI+    +  TN               ++ T  G ++ + 
Sbjct: 1   MKKIFLIMLISLVYCSFLTNNIYAMTPVEITNNSKEQLDEDLNPRGTVVTTTNGQILYKY 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGST 101
           + D   +PAS TKLMT  V++  +   +  L   + IS+   +       +    KKG T
Sbjct: 61  HKDKKVDPASTTKLMTMLVIYEDINHSEMRLKDKVKISERYQKMSQLPNLTTFPLKKGQT 120

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            T++  LK   + S+N   + +AE +     KF   MN  ++ LG++ THF N  G    
Sbjct: 121 YTIEQLLKQAALNSSNAATLVLAEHIDGDISKFTDRMNREAQLLGMNQTHFTNPSGADNK 180

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                           YTTA DMAIL+  +   +P  +   Q++      ++  NTN ++
Sbjct: 181 IIKPYEPKKYKDETSSYTTANDMAILTNHLLRKYPNILKMTQLETDTQYHQQLHNTNLSL 240

Query: 208 GT----FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDRNTRNKVSA 257
                     DG+KTG T   G+N+  +A +    +   +           +  R+KV+ 
Sbjct: 241 PHQSLGMKNVDGLKTG-TSKKGYNLALTAKKDQLRVNTNLFNIQPYPSEKAKFARHKVAN 299

Query: 258 SLLSMGFYNKTDRKKINYIIKDF------YQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           +L    F N T RK I+  +          +++L + VP  +        +  + + +  
Sbjct: 300 ALTQHAFENYTYRKVISKGVHQIDGKTYNVKEDLYDVVPKDNSNYELEISDKNHLSVKYN 359

Query: 312 EAKDKESHFIDFEKI 326
                E H I   K+
Sbjct: 360 RQFTNEVH-IPSVKV 373


>gi|296111124|ref|YP_003621505.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc kimchii IMSNU
           11154]
 gi|295832655|gb|ADG40536.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc kimchii IMSNU
           11154]
          Length = 421

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 128/374 (34%), Gaps = 48/374 (12%)

Query: 1   MRQF------LVIIAMAMLSNIFPFLSIAETNK--LPYYTLLDTNTGHVIAENYPDHPWN 52
           MR+       +V++ +   +     L+     K  +    ++D  TG ++AE   D    
Sbjct: 1   MRRIKVIGVSVVMLFLMTTTVSASTLAKPLDIKQDVSSAIVIDAGTGQILAEKNSDELGP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK-----NASEYPPSNSTFKKGSTMTLDNA 107
            AS +KL+TAY V   +   K   +  +TISK         +  S+   K G  +T+   
Sbjct: 61  IASQSKLLTAYAVLKAIDSGKIKWSDKVTISKKADLSKQDSHMFSHLAVKAGDRLTVREL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------- 158
              +I  S+ND A A+AE L   +    Q + + ++ L L+ + + N+ G          
Sbjct: 121 YNTMITLSSNDSAFALAEYLTPKKMTTAQALQSWAEELQLTKSKWYNSAGQVNQDAFENK 180

Query: 159 -----VQHGHYTTARDMAILSWRIKTDFPQYMH--------YFQIKGLEIKGKKYPNTNW 205
                    +  + + +A+++  I    P            Y   K   +        NW
Sbjct: 181 VTSAPDNAVNLASPKHVAMIAREIVRLDPDIRKLATSTHVSYHLTKNYVVNEPTEMTKNW 240

Query: 206 AVGTFLG---ADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALD---RNTRNKVSAS 258
                      +G+KTG T  SG               I V+ GA        R + + +
Sbjct: 241 PYLINPNHLIIEGLKTGSTPESGAAFTGIIKDASGHEFITVVNGAASYMDEVQRYQKTLN 300

Query: 259 LLSMGFYNKTDRK------KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           +++    +K                 D  +   S+    I++       +      ++K 
Sbjct: 301 IVNAVLADKQATTFSKGTVLSQAKHVDLPRMKQSHMPVKIAQTKTIWVNKGSKLTPEIKV 360

Query: 313 AKDKESHFIDFEKI 326
              K       +K+
Sbjct: 361 FNVKGKSVKKNQKV 374


>gi|187935277|ref|YP_001886777.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187723430|gb|ACD24651.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum B
           str. Eklund 17B]
          Length = 425

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 62/305 (20%), Positives = 124/305 (40%), Gaps = 23/305 (7%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLS-----------IAETNKLPYYTLLDTNTGHVIAENYP 47
           M++   L  +A+ +  ++F   S            + + +      +D  TG +I     
Sbjct: 1   MKRNLILKTLALTLTISLFAPFSVKSYATENTEQTSPSIQAESALTMDYETGEIIYAKDA 60

Query: 48  DHPWNPASL-TKLMTAYVVFSFLKEKKAMLTTPITISKNAS-EYPPSNSTFKKGSTMTLD 105
           D    PAS    L    +   F K  +   T         S       +  + G  M  D
Sbjct: 61  DSKRYPASTTKLLTGLLLAEKFEKNSEISFTQSAKEQPEYSLNINYMGNKMQVGDKMLAD 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + +K L++ S ND A  IA+++  +   F + MN  +K LG + ++F+ A+G+    HYT
Sbjct: 121 DVMKGLLLFSGNDTAYMIADNVAGSANAFSELMNKKAKELGANNSNFITANGLHDPNHYT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYF-QIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCA 223
           TA D+++++     +  +      +   ++I G +    N  +G    G    KTG T A
Sbjct: 181 TAYDLSLITKAAFENPWEKETMELKEAPIDINGSRIILENRNLGLGKNGNIAGKTGSTNA 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +G  + A   +  + +I V+L +   +    T+     S+++  +    D++      ++
Sbjct: 241 AGGCLAAVYEKDGRKIIGVVLKSRQLDNVDMTKFNDMDSIVNYSYS--ADKQVYKKTNEE 298

Query: 280 FYQQN 284
               +
Sbjct: 299 VGTTD 303


>gi|229091482|ref|ZP_04222692.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-42]
 gi|228691856|gb|EEL45603.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-42]
          Length = 221

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M      IA+    +       A   +     L++ N+G ++ E   D     AS+TK+M
Sbjct: 1   MLTLFCSIAVI-SGSASAETVSAIEVEAGSAILVEANSGKILYEKNADESLAIASMTKMM 59

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSA 116
           + Y+V   ++  K      + IS+ A +     S          + T+    + +++ SA
Sbjct: 60  SEYLVHEAVENGKLKWNQKVKISEYAYKISQDRSLSNVPLENGGSYTVKELYEAMVIYSA 119

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------------VQHG 162
           N   +A+AE +   E  FV+ MN+ SK  G+    F+N+ G+                  
Sbjct: 120 NGATIALAEEIAGKEVNFVKMMNDKSKEFGMKNYKFVNSTGLTNHDLKGHHPEGTTPDEK 179

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           +  +ARD AIL+ R+  DFP+ +   +I       
Sbjct: 180 NKMSARDCAILAQRLIQDFPEMLDTAKIPKKHSNR 214


>gi|331084851|ref|ZP_08333939.1| hypothetical protein HMPREF0987_00242 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410945|gb|EGG90367.1| hypothetical protein HMPREF0987_00242 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 323

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 22/249 (8%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--AS 87
              L   N   V+      +   PAS TK++TAYV   +       L+  +T+S+     
Sbjct: 75  AAGLFGVNQEQVLYAQNLHNKLYPASTTKVLTAYVALKY-----GNLSDIVTVSRRAVTF 129

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           +   S    ++   +T++  L  L++ S ND A+AIAE +  + + FV+ MN  ++ LG 
Sbjct: 130 DVDASVCGLQENDQITMEALLYGLLLHSGNDNAIAIAEHISGSVEAFVELMNEEARKLGA 189

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTD------FPQYMHYFQIKGLEIKGKKYP 201
           + THF N HG+ +  HYTTA D+ ++      +        Q  +   ++      ++  
Sbjct: 190 TNTHFTNPHGLHEADHYTTAYDLYLIFNECMKNETFLTMISQSSYAATVQNPTSGTRQLT 249

Query: 202 NTNWAVG--------TFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTR 252
            T                   G KTG    +G  ++           I++++GA D+   
Sbjct: 250 WTPSHFYAQGLAIPPQNAVIVGGKTGTEDLAGSCLILLEKDLSGNPYISIVMGAPDKTVL 309

Query: 253 NKVSASLLS 261
                SL+S
Sbjct: 310 YNDMTSLIS 318


>gi|229816443|ref|ZP_04446744.1| hypothetical protein COLINT_03496 [Collinsella intestinalis DSM
           13280]
 gi|229807985|gb|EEP43786.1| hypothetical protein COLINT_03496 [Collinsella intestinalis DSM
           13280]
          Length = 449

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/280 (20%), Positives = 100/280 (35%), Gaps = 28/280 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                 +  ++  + G V  E   D P   AS TK+MTA V            +  +T+ 
Sbjct: 53  PDILATHAIIMRPD-GSVYYEREADSPIKIASTTKVMTALVALDHCD-----PSETLTVD 106

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--------KFV 135
             A+    S    K+G T+TL+ AL  L+V S ND+A AIA  +              F+
Sbjct: 107 HAAATVGESCVGLKEGDTLTLEQALTGLMVMSGNDVATAIATHVGGKIDPASADPYGTFI 166

Query: 136 QHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + MN+ +  LG + T F N HG+         ++TA D+  +      +           
Sbjct: 167 KAMNDRAAQLGCTDTLFENPHGLDFGAWVGNLHSTAHDVTRIWAEAWHNEAFRSFACSDA 226

Query: 192 GLEI--------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAV 242
                       +       N  +G   G  G KTG T  +G   V +  +  +  +   
Sbjct: 227 TEMHVTSADGSARSLPLTVRNKILGR-DGNLGGKTGSTYEAGECFVCTFSREPEGEVYIA 285

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           + G+     R   + +L +  + +  +        +    
Sbjct: 286 LFGSKGDEGRFNDTLTLANWYYGHFANLPFATSPKQVGGV 325


>gi|115358748|ref|YP_775886.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria AMMD]
 gi|115284036|gb|ABI89552.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia ambifaria AMMD]
          Length = 359

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 90/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 103 LLASCGYSSRAVRSLHSRAAYVLDVDSGTPLLARNARAVRPIASISKLMTAVVARDADRP 162

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L      S++      + S    G+ ++      + ++ S N  A A++       
Sbjct: 163 LNGVL---RVTSRDRDTIKFTGSRLPIGAELSRRQMFHIALMSSENRAAAALSRDYPGGR 219

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQI 190
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 220 AAFVKAMNREARRLGMRQTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDTS 278

Query: 191 KGLEIKGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++    +    N       G       KTGF   SG  +V       +    V+LGA 
Sbjct: 279 TTVQAGDGELVYVNSDPLVRNGSLPIRLQKTGFINESGHGVVMRMRVKGRRETIVLLGAP 338

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 339 TRAGVSSDAVKIHRW 353


>gi|150015827|ref|YP_001308081.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902292|gb|ABR33125.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 440

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/307 (20%), Positives = 118/307 (38%), Gaps = 11/307 (3%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP--IT 81
              K      +D  TG +I     D    PAS TKL+T  ++     +   +  T     
Sbjct: 45  PNIKAEAALTMDLETGEIIYCKDADSKRYPASTTKLLTGLLLAESKDKADQLEYTKSAKE 104

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
             + +      ++T + G  +T D+ +K L++ S ND A  IA+++    K F + MN  
Sbjct: 105 QPEYSLNLNYMHNTMQPGDKVTSDDIMKGLLLFSGNDTAYVIADNISGDVKSFAELMNKK 164

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGK 198
           +K LG + ++F+  +G+    HYTTA D++I+      +  +       K     +    
Sbjct: 165 AKELGANNSNFVTPNGLHDPNHYTTAYDLSIIMKAAFANPWERETMELEKAPITLKNSRI 224

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNK 254
              N N  +G   G    KTG T  +G  +     +  + LI ++L +   +    T+  
Sbjct: 225 ILENRNLTLGKN-GNLAGKTGTTNEAGGCLATVYDRDGRQLIGIVLKSRQIDNADMTKFN 283

Query: 255 VSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
              +++   +   K   K     +     +     +   ++ +    K   + N      
Sbjct: 284 DMDAIMDYSYGAKKEVYKANGESVGTADVKYKPFILFGPTKTISVPIKLTQDVNYYKNAI 343

Query: 314 KDKESHF 320
            D ES  
Sbjct: 344 NDSESQI 350


>gi|325661590|ref|ZP_08150214.1| hypothetical protein HMPREF0490_00948 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472117|gb|EGC75331.1| hypothetical protein HMPREF0490_00948 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 323

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 22/249 (8%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--AS 87
              L   N   V+      +   PAS TK++TAYV   +       L+  +T+S+     
Sbjct: 75  AAGLFGVNQEQVLYAQNLHNKLYPASTTKVLTAYVALKY-----GNLSDIVTVSRRAVTF 129

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           +   S    ++   +T++  L  L++ S ND A+AIAE +  + + FV+ MN  ++ LG 
Sbjct: 130 DVDASVCGLQENDQITMEALLYGLLLHSGNDNAIAIAEHISGSVEAFVELMNEEARKLGA 189

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------HYFQIKGLEIKGKKYP 201
           + THF N HG+ +  HYTTA D+ ++      +           +   ++      ++  
Sbjct: 190 TNTHFTNPHGLHEADHYTTAYDLYLIFNECMKNETFLTMISRSSYAATVQNPTSGTRQLT 249

Query: 202 NTNWAVG--------TFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTR 252
            T                   G KTG    +G  ++           I++++GA D+   
Sbjct: 250 WTPSHFYAQGLAIPPQNAVIVGGKTGTEDLAGSCLILLEKDLSGNPYISIVMGAPDKTVL 309

Query: 253 NKVSASLLS 261
                SL+S
Sbjct: 310 YNDMTSLIS 318


>gi|309775554|ref|ZP_07670554.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308916648|gb|EFP62388.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 337

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 111/269 (41%), Gaps = 19/269 (7%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
              D   + AS++K+MTA +     K     L    T+ +  ++   S+   K+G T+TL
Sbjct: 47  KNKDDKQSVASISKIMTAVIAIEHGK-----LDEAFTVDEEINKAYGSSVYLKQGQTVTL 101

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHG 162
            + L  L+++S ND AV IA+ +  +++ FV+ MN  +  +G+S T F N  G+     G
Sbjct: 102 RDLLYALMLRSGNDAAVEIAKHVSGSQEAFVEAMNQKAAEIGMSNTTFSNPSGLDEEDGG 161

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           + +TA DMAIL      +                  ++ N N  +  +    G KTGFT 
Sbjct: 162 NISTANDMAILMSYAMKNKEFRTITGSKYYTTDWNMRWKNKNRLLFDYPFTIGGKTGFTK 221

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
            +G  +V +A       I V L       R           F+ +   +    +      
Sbjct: 222 KAGRTLVTAAEHDGVESIVVTL-------REGD-----DFAFHEQKHTEVFQKLDVVTIM 269

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           +  S  V   + +V  T K  ++ +   K
Sbjct: 270 KKGSYTVNGRTFQVPETVKVTLHKDGSDK 298


>gi|323341764|ref|ZP_08081997.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464189|gb|EFY09382.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 434

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 113/320 (35%), Gaps = 21/320 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +   Y L+D  TG  +AE   D   +PAS+TK++T       L   +  L T  TI  
Sbjct: 34  DLQSQNYILVDPKTGQTLAEKNHDASIHPASITKVLTVITAIEAL--GETSLDTLYTIPP 91

Query: 85  NAS---EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
                 +   S + F++G  +TL++ L  +++ S  D   AI+  L    +K V  MN  
Sbjct: 92  EVFEGLDPIASVAGFQEGDQVTLNDLLHGIMLPSGADATRAISSYLTHDPEKLVVKMNRL 151

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           ++ +G+  +HF+N  G+    H TT  D+A+L      +      Y     L      +P
Sbjct: 152 AQRIGMKNSHFVNTSGLDDPKHLTTLDDLALLLRYALENPTFESIYKTETYLTSSTPSHP 211

Query: 202 NTN---------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
           N                +    G K+G T  +   + + A    QS I +   A   N  
Sbjct: 212 NGIELTNESLSVAHQKGYTMIKGAKSGTTDLAERALSSVAEDASQSYIFISTNAPFENRL 271

Query: 253 NKVSA---SLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVPNISEEVCTTQKEIIN 305
                   ++      N      +                  E+    + +    K+   
Sbjct: 272 YTQVIDHGTVYQHVIENYQYAPLLYKNTTIQTIPIKHGRTDFEIWFKDDIMSYLPKDYDP 331

Query: 306 YNTQMKEAKDKESHFIDFEK 325
            + +++    ++       K
Sbjct: 332 KDIKIEFIPSQKEFEAPLPK 351


>gi|118444189|ref|YP_877702.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
 gi|118134645|gb|ABK61689.1| D-alanyl-D-alanine carboxypeptidase [Clostridium novyi NT]
          Length = 443

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 83/366 (22%), Positives = 133/366 (36%), Gaps = 43/366 (11%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH-PWNPASLTKLMTAYVVFSFLKE 71
            +  F               ++D  TG VI     D  P  PAS TKL+TA ++    K 
Sbjct: 19  CTTAFADNLSEPNIVGKSAIVIDAKTGEVIYAKNADASPMYPASTTKLLTALLLAENKKP 78

Query: 72  -KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                 T         +         K G TM+ D+A+K L++ SANDIA  IA+++   
Sbjct: 79  TDMLTYTEGSIKQPEYTLRSFLKGKLKVGDTMSADDAMKGLLLHSANDIASMIADNVGGN 138

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--HGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + F + MN+  K LGL  THF+  +G+      HYT+A D++I+     ++        
Sbjct: 139 TENFAKMMNDKVKQLGLKNTHFVTPNGLDSGISDHYTSAYDLSIIGKAAYSNEWIRNTMN 198

Query: 189 QIKGLEIKGKKY----PNTNWAVGT--------------------FLGADGMKTGFTCAS 224
             K              N N  VGT                         G KTGFT  +
Sbjct: 199 LKKSKVELSNGILGYPQNRNKLVGTVLDSKFLSTIGNISKNIPESNAVCVGGKTGFTTKA 258

Query: 225 GFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNK-----------TDR 270
           G  +VA   + ++ LI V++ +    +        A +++  ++ K              
Sbjct: 259 GRCLVAMFNKDNRVLIGVVMKSVYDKNDTYVFNDMAKIMNFAYFQKPVPLYKANIELKTL 318

Query: 271 KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 +K F      N    + E+V     E+ N   + +    K S      K T + 
Sbjct: 319 PIQYRPLKFFGPVKTINVPVTLKEDVTYYNNELNNSYNKTEFELPKLSIG-QLGKNTSVG 377

Query: 331 NKITKK 336
             + K+
Sbjct: 378 KLVLKE 383


>gi|120556509|ref|YP_960860.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Marinobacter
           aquaeolei VT8]
 gi|120326358|gb|ABM20673.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Marinobacter aquaeolei VT8]
          Length = 308

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 8/258 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +A+          A           +     ++   + D P   AS+TKLMTA VV    
Sbjct: 14  LAVSGQSLASPERAPNLASVQAAAAEVGKEGLLFGKHADRPVPVASITKLMTALVVVESG 73

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           ++    LT      ++      + S  + GS +   + L++ ++ S N  A  +A     
Sbjct: 74  QDMDEWLTFEE---RHVEAAANAWSRIRVGSQLRRRDVLRIALMSSENFAAYTLARVYPG 130

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
               FV  MN  +K LG+  T F++  G+      T A  + +    +K    +      
Sbjct: 131 GFDGFVAAMNAKAKALGMLQTRFVDPTGLSTDNVSTAADLVILARAALKHPEIREASTTG 190

Query: 190 IKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
               E +  +Y     NTN  V          KTG+   +G  +V  +      +I V+L
Sbjct: 191 YYRAEFRKPRYSLSFGNTNALVHRDSWGVSLSKTGYLTEAGRCLVMVSEMNGTPVITVLL 250

Query: 245 GALDRNTRNKVSASLLSM 262
            +L   +    +  +   
Sbjct: 251 DSLGTRSPMGDAGRIKRW 268


>gi|311696252|gb|ADP99125.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [marine
           bacterium HP15]
          Length = 271

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 88/238 (36%), Gaps = 10/238 (4%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
             +       +I     D     AS+TK+MTA VV    +     L   +T  +  +   
Sbjct: 3   AAVAVAGDNKLIFGKNADRSVPIASVTKVMTALVVLESGEP----LDEWLTFHERHTPAA 58

Query: 91  PSNSTFKKGS-TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
            +  +  +    M   + L++ ++ S N  A  +A +       F++ MN  +  LG++ 
Sbjct: 59  ANAYSRIRIDSEMRRKDVLRIALMSSENFAAYTLARNHPGGFDAFIEAMNAKAAALGMTG 118

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP----NTNW 205
           T F++  G+      T A  + +++        +          + +  +Y     NTN 
Sbjct: 119 TRFVDPTGLSSENLSTAADLVKLVNAAADYPEIREYSTTGYFRGQFRQPRYSLSFGNTNA 178

Query: 206 AVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            V          KTG+   +G  +V  +    + ++ V+L +L   +    +  +   
Sbjct: 179 LVHRDSWGVALSKTGYLSEAGRCLVMISKMNGKEVVTVLLDSLGTRSPMGDAGRIKRW 236


>gi|164686848|ref|ZP_02210876.1| hypothetical protein CLOBAR_00444 [Clostridium bartlettii DSM
           16795]
 gi|164604238|gb|EDQ97703.1| hypothetical protein CLOBAR_00444 [Clostridium bartlettii DSM
           16795]
          Length = 336

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 65/298 (21%), Positives = 110/298 (36%), Gaps = 43/298 (14%)

Query: 1   MR--QFLVIIAMAMLSNIFPF------------------LSIAETNKLPYYTLLDTNTGH 40
           M+  + +  + + M+  I                       I+       Y ++D N+G 
Sbjct: 5   MKGIKKITALFLIMILTISTSGFVNKVESAQVSKSQTNDSPISMGVSAHAYVVMDANSGE 64

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFK 97
           +I     D    PAS TKL+TA V           L   I + +   N  +   S    +
Sbjct: 65  IIMSQDADKKIYPASTTKLLTAVVAIENC-----NLDREIEVKQAALNKVDVESSIVGLR 119

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
            GST T++  L +L++ SA D A  IAE +  + + F   MN  +K +G++ ++F N  G
Sbjct: 120 AGSTYTMEQLLYMLLIVSAGDAAEVIAEEVAGSSEAFATMMNEKAKQIGMTDSYFDNPVG 179

Query: 158 VVQHGH---YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK-------YPNTNWAV 207
           +  H +   ++TA D+A L+     ++                           N     
Sbjct: 180 MDWHSNAKIHSTAHDIAKLTQYAMANYEIRKIVRHSFYTVDNFYNGKSITLGSSNGFLRK 239

Query: 208 GTFLG----ADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVSASLL 260
             +        G KTG T  +GF +  +A     + +I    G   R+   K    LL
Sbjct: 240 RKYADNLFTVIGSKTGTTDKAGFALTTTAKDNEGREVICAFFGNSTRDKMYKDINRLL 297


>gi|222152529|ref|YP_002561704.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus uberis 0140J]
 gi|222113340|emb|CAR40938.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus uberis
           0140J]
          Length = 393

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 60/348 (17%), Positives = 123/348 (35%), Gaps = 54/348 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET-------------------NKLPYYTLLDTNTGHV 41
           +++ L+ +++  L+     +   E                    NK     ++D   G +
Sbjct: 2   IKKILLFLSIFALTISTIPVIANEKDSDDIMTITRKAGYSVKDINKPKSSIVIDAKNGDI 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG-- 99
           + E+  +   +PAS++KL T Y++F  L + K  L T IT +                  
Sbjct: 62  LWEDNINEHRDPASMSKLFTLYLLFEDLSKGKLSLETTITATDRDQAISGIYEISNNKII 121

Query: 100 ---STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
                   D      +  S     +            F+  +N  ++ LG+  T F NA 
Sbjct: 122 SGVEYPIKDLIFMTAVPSSNAATVMIANYLSNNDASAFIDRINQKARELGMHDTFFSNAS 181

Query: 157 GVVQHG---------------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           G                    + T+A D+AIL++    ++P+ + Y   + ++       
Sbjct: 182 GAAAEAFKGLYNPDKYDLSAPNQTSAHDLAILTYHFLKEYPEIVTYTNQRIVKTMVGTPY 241

Query: 202 NTNWAVGTFL---------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT- 251
              +    +          G DG+KTG + +  FN + +  +  + LI +++G  D +  
Sbjct: 242 EEEFTTYNYSLPGDRYGMTGVDGLKTGSSPSGAFNAIVTTKRNQKRLITIVMGVGDWSDQ 301

Query: 252 -----RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
                R+    +L    F +   +  I Y      ++  S+  P+  +
Sbjct: 302 DGEYYRHPFINALTEKAFSDLKQKNNIPYSNLFHEKKQTSSGRPSAKK 349


>gi|171315671|ref|ZP_02904905.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MEX-5]
 gi|171099203|gb|EDT43976.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MEX-5]
          Length = 359

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 90/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         T       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 103 LLASCGYSPRAVRTLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 162

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L      S++      + S    G+ ++      + ++ S N  A A++       
Sbjct: 163 LNGVL---RVTSRDRDTIKFTGSRLPIGAELSRRQMFHIALMSSENRAAAALSRDYPGGR 219

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQI 190
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 220 AAFVKAMNREARRLGMRQTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDTS 278

Query: 191 KGLEIKGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++    +    N       G       KTGF   SG  +V       +    V+LGA 
Sbjct: 279 TTVQAGDGELLYVNSDPLVRNGRLPIRLQKTGFINESGHGVVMRMRVKGRRETIVLLGAP 338

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 339 TRAGVSSDALKIHRW 353


>gi|238028296|ref|YP_002912527.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           glumae BGR1]
 gi|237877490|gb|ACR29823.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           glumae BGR1]
          Length = 376

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 10/256 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++     +           ++D  +G V+ E + +     AS++KLMTA V       
Sbjct: 120 LLASCGYTPATRRLLHSQAIYVIDERSGTVLLERHANRIKPIASVSKLMTAVVSLD---- 175

Query: 72  KKAMLTTPITISKNASEYPPSN-STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
           +   LT  + +S +  +      S  K GS ++  + L + ++ S N  A A++      
Sbjct: 176 RHVPLTHRLRVSVSDRDTIKFTGSRLKVGSVLSRRDMLHIALMSSENRAAAALSRDYPGG 235

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---MHY 187
              F+  MN  ++ LG++ T F+NA G+    + +TARD+A L                +
Sbjct: 236 RPAFIAAMNRKARMLGMTNTRFVNATGL-SPQNVSTARDLARLLSAAARYPAIRTFSTDH 294

Query: 188 FQIKGLEIKGKKYPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
            Q+         Y N+N    G        KTGF   +G  +V     G + +  V+L A
Sbjct: 295 AQVVHPGRGQLSYVNSNALVRGGDTRIRLQKTGFINEAGHCLVIRYRIGARPVDVVLLDA 354

Query: 247 LDRNTRNKVSASLLSM 262
                    +  + + 
Sbjct: 355 PGPRDHVADAIRIRNW 370


>gi|291550390|emb|CBL26652.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus torques L2-14]
          Length = 343

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 100/251 (39%), Gaps = 22/251 (8%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA--S 87
              L + N   V           PAS TKLMTAY+ F +       +   +T+S +    
Sbjct: 92  AAGLFNLNDKTVEYGYKLYDKLYPASTTKLMTAYLAFKY-----GNMDDIVTVSDSVSSF 146

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    + G T+TL + L  L+++S ND  VAIAE +  + + F + MN+ +K LG 
Sbjct: 147 ASDEVVCNLQPGDTVTLYDLLCGLLLRSGNDCGVAIAEHISGSVEAFAELMNSEAKALGA 206

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTD---FPQYMHYFQIKGLEIKGKKYPNTN 204
           + +HF+N HG+    HYTTA D+ ++      D               L          +
Sbjct: 207 TGSHFVNPHGLHNENHYTTAYDLYLIFNACIQDQRFMDIISMDSYTMNLTGADGTTRTFD 266

Query: 205 WAVGTFLG-----------ADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTR 252
                +               G KTG T  +G  ++  +        I++I+GA D+   
Sbjct: 267 VVPTNYYSSGKINAPEGIRVFGGKTGTTDEAGCCVILYSEDLEKNPYISIIMGAEDKGFL 326

Query: 253 NKVSASLLSMG 263
            +    LL  G
Sbjct: 327 YQEMNRLLEAG 337


>gi|187735971|ref|YP_001878083.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187426023|gb|ACD05302.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 323

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/329 (17%), Positives = 118/329 (35%), Gaps = 47/329 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++  + +        F   +     + P Y  ++ N+G ++  +  +     ASL+++ 
Sbjct: 1   MKKLSLFLLTLACVFQFSAQAQ----QRPSYIAIEANSGKLLFSSNAEEKRPVASLSQVA 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           TA V   ++   +  L T I + + A      +    + G  +TL +AL   ++ S N  
Sbjct: 57  TAMVALDWVARTRLPLDTFIAVPQEAFGLRAGNPMDLQPGDRLTLRDALYSTLLGSDNVS 116

Query: 120 AVAIAESLCK----------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT--- 166
           A+ +A  + +              FV  MNN +++L ++ T F   HG+      +T   
Sbjct: 117 ALTVASFVGRDLVSRRGGGAPIAAFVAEMNNLARSLRMAKTRFTAPHGLDAGNSVSTSCA 176

Query: 167 -------ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                     M   ++             Q +          N N  +    G DG+K G
Sbjct: 177 LDMALLGVYSMQNPAFCYIVSQASRRIEVQSQTKGRTMYDISNNNRLMSA-SGVDGIKAG 235

Query: 220 FTCASGFNIVASAIQG---------------DQSLIAVILGALDRNTRNKVSASLLSMGF 264
            + A+G  ++ S  +                 Q +I  +LG+     R  ++  +++ G+
Sbjct: 236 TSRAAGPCLLLSVTRNAISRRSPQTGTEVIYPQRMIIAVLGSAS---RYSLAREMMNTGW 292

Query: 265 Y---NKTDRKKINYIIKDFYQQNLSNEVP 290
               N           K+F Q  + +   
Sbjct: 293 RVWENWQASGMDMKDPKEFVQLPVKSAPQ 321


>gi|170700087|ref|ZP_02891109.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria IOP40-10]
 gi|170135001|gb|EDT03307.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria IOP40-10]
          Length = 359

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 90/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 103 LLASCGYSPRAVRSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 162

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L      S++      + S    G+ ++      + ++ S N  A A++       
Sbjct: 163 LNGVL---RVTSRDRDTIKFTGSRLPIGAELSRRQMFHIALMSSENRAAAALSRDYPGGR 219

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQI 190
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 220 AAFVKAMNREARRLGMRQTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDTS 278

Query: 191 KGLEIKGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++    +    N       G       KTGF   SG  +V       +    V+LGA 
Sbjct: 279 TTVQAGDGELLYVNSDPLVRSGSLPIRLQKTGFINESGHGVVMRMRVKGRRETIVLLGAP 338

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 339 TRAGVSSDALKIHRW 353


>gi|260587729|ref|ZP_05853642.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Blautia hansenii DSM
           20583]
 gi|260541994|gb|EEX22563.1| serine-type D-Ala-D-Ala carboxypeptidase DacF [Blautia hansenii DSM
           20583]
          Length = 301

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 86/238 (36%), Gaps = 12/238 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   LLD   G ++     +    PASLTK+MT  +    L   + +      I  
Sbjct: 47  ELYSEAAILLDEE-GQILGRKNSEKKIYPASLTKIMTVLLSIEKLDNIREITVLREEIFP 105

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F  G  +T  + L   ++ S  +  VA+AE  C +EK+FV  MN  +K 
Sbjct: 106 ELYAQDASMAGFLPGEKVTYRDLLYGAMLPSGAECCVALAEGSCGSEKEFVSEMNKKAKK 165

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD-----------FPQYMHYFQIKGL 193
           LG+  THF N  G+    HYTT  D++ L      +           +         +G 
Sbjct: 166 LGMKNTHFTNTTGLHDDNHYTTVEDLSRLLCYAMKNQDFSKIFTAFSYSVPATNKHPEGF 225

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                       A        G KTG+T  +G  +  +A    +    +   A   + 
Sbjct: 226 TFFSTLSQELQKAGVKDSCILGGKTGYTSNAGLCLATAAEINGKKYFFITAHAQGSHN 283


>gi|77411815|ref|ZP_00788150.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae
           CJB111]
 gi|77162150|gb|EAO73126.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae
           CJB111]
          Length = 393

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 76/348 (21%), Positives = 140/348 (40%), Gaps = 54/348 (15%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M + +V     +LS        AE                   NK     ++D N GH++
Sbjct: 1   MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHIL 59

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKK 98
            E+  D   +PAS++K+ T Y++F  L + K  L T +T ++           SN+    
Sbjct: 60  WEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISNNNIHA 119

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G    +   + +  V S+N   + IA          F++ +N T+K LG++ THF N  G
Sbjct: 120 GVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLGMTKTHFYNPSG 179

Query: 158 ---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
                               + TTARD++IL++     +P  ++Y +   ++        
Sbjct: 180 AVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYE 239

Query: 203 TNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-- 251
             +    +          G DG+KTG + ++ FN + +A + +  LI V+LG  D +   
Sbjct: 240 ETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVVLGVGDWSDQD 299

Query: 252 ----RNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
               R+    +L+  GF +  +      ++K    +    +  +I E+
Sbjct: 300 GEYYRHPFVNALVEKGFKDAKNISSKTPVLKAVKPKKEVTKTKSIQEQ 347


>gi|210634508|ref|ZP_03298135.1| hypothetical protein COLSTE_02057 [Collinsella stercoris DSM 13279]
 gi|210158809|gb|EEA89780.1| hypothetical protein COLSTE_02057 [Collinsella stercoris DSM 13279]
          Length = 450

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 65/342 (19%), Positives = 120/342 (35%), Gaps = 36/342 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                P+  +L  + G    E   D P   AS+TK+MTA V           L+  +T+ 
Sbjct: 53  PDISAPHAMILGQD-GTAYFERDADDPIKIASVTKVMTALVALEHCD-----LSDTVTVD 106

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--------SLCKTEKKFV 135
             A+    S+    +G T+T+++AL  L+V S ND A AIA         +       F+
Sbjct: 107 HAAATVGESSLGLLEGDTLTMEDALTGLMVMSGNDAATAIATTAGAQIDPTSDDPYAVFI 166

Query: 136 QHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           + MN  +K LG + T F N HG+         ++T RD+  +      +          +
Sbjct: 167 EAMNEKAKELGCTDTVFENPHGLDFDAWAGNLHSTTRDITKVFAAAMQNEDFRAIDNSDR 226

Query: 192 GL--------EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAV 242
                       +       N   G   G  G KTG T  +G   V +  +     +   
Sbjct: 227 TSIPVTSADGSARTVNLVVRNQIHGQ-DGNIGGKTGTTDEAGNCFVGAFTRDLGGEVYVA 285

Query: 243 ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQK- 301
           I GA     R   + +L +  + +       N  +K      +     +   +     + 
Sbjct: 286 IFGAQTNEERFADTLTLANWYYDHMATVPFANTPVKRNGIPLVGEAPCSAWCDQTAATQL 345

Query: 302 -------EIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
                   + +   +++++ + +      E+   +     K+
Sbjct: 346 EDADATFAVFSLGDELEQSIEFDELSGAVEQGDDVGTITFKQ 387


>gi|325678286|ref|ZP_08157914.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus albus 8]
 gi|324110049|gb|EGC04237.1| serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus albus 8]
          Length = 401

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 64/312 (20%), Positives = 122/312 (39%), Gaps = 22/312 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   L+D ++  +IA    D    PASLTKLMT  V    + +  A          
Sbjct: 94  DATFSTAVLMDADSNELIAGLKYDKKIYPASLTKLMTLLVAVENIDDMNAKYKFTDKDID 153

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
              +   S + +  G   T+++ L   I+ S  D  + +A ++  +EK FV+ MN+ +  
Sbjct: 154 PLIDENASRAGYVAGDEATMEDLLYAAILPSGADGTLGLANAIAGSEKDFVKLMNDKAAE 213

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT- 203
           LGL+ T+F+NA G+    HYTTA+DMA+++     +       F  K      +++ +  
Sbjct: 214 LGLTDTNFVNASGLHDKQHYTTAQDMAVITRACLQNDVCRKVMFAEKWTTKPTQEFEDGI 273

Query: 204 ------NWAVGTF------LGA-----DGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 +   G +       GA     +G KTGFT  S F +        +  I +   +
Sbjct: 274 ELDSILHSRFGGYFIDADQDGAEDAELEGGKTGFTDESMFCLSTVVKYNGKEYICITTKS 333

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
                  + +  +    + N         +  D   +  +++     +    T  +    
Sbjct: 334 DGDLIATEDAIMV----YENYLPGAVGTPVTADESSEAENSDESQADDNNVITITDDTAS 389

Query: 307 NTQMKEAKDKES 318
           +++    ++ E+
Sbjct: 390 SSKPAADENYEA 401


>gi|188588906|ref|YP_001921735.1| D-alanyl-D-alanine carboxypeptidase family [Clostridium botulinum
           E3 str. Alaska E43]
 gi|251779044|ref|ZP_04821964.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188499187|gb|ACD52323.1| D-alanyl-D-alanine carboxypeptidase family [Clostridium botulinum
           E3 str. Alaska E43]
 gi|243083359|gb|EES49249.1| D-alanyl-D-alanine carboxypeptidase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 425

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 23/305 (7%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLS-----------IAETNKLPYYTLLDTNTGHVIAENYP 47
           M++   L  +A+ +  ++F   S            + + +      +D  TG +I     
Sbjct: 1   MKRNLILKTLALTLTISLFAPFSVKSYATENTEQTSPSIQAESALTMDYETGEIIYAKDA 60

Query: 48  DHPWNPASL-TKLMTAYVVFSFLKEKKAMLTTPITISKNAS-EYPPSNSTFKKGSTMTLD 105
           D    PAS    L    +   F K  +   T         S       +  + G  M  D
Sbjct: 61  DSKRYPASTTKLLTGLLLAEKFEKNSELSFTQSAKEQPEYSLNINYMGNRMQVGDKMLAD 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + +K L++ S ND A  IA+++  +   F   MN  +K LG + T+F+ A+G+    HYT
Sbjct: 121 DVMKGLLLFSGNDTAYMIADNVAGSSDAFSALMNKRAKELGANNTNFITANGLHDPNHYT 180

Query: 166 TARDMAILSWRIKTDFPQYMHYF-QIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCA 223
           TA D+++++     +  +      +   ++I G +    N  +G    G    KTG T A
Sbjct: 181 TAYDLSLITKAAFDNPWERETMELKESPIDINGSRIILENRNLGLGKNGNIAGKTGLTNA 240

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDRKKINYIIKD 279
           +G  + A   +  + ++ V+L +   +    T+     S+++  +   TD++      ++
Sbjct: 241 AGGCLAAVYEKDGRKIVGVVLKSRQIDNVDMTKFNDMDSIINYSYS--TDKQVYKKANEE 298

Query: 280 FYQQN 284
               +
Sbjct: 299 VGTTD 303


>gi|221209869|ref|ZP_03582850.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD1]
 gi|221170557|gb|EEE03023.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD1]
          Length = 364

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 91/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 108 LLASCGYNPRAVRSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 167

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L        +      + S  + GS ++  +   + ++ S N  A A++       
Sbjct: 168 LNGVLRVTA---NDRDTIKFTGSRLQVGSELSRRDMFHIALMSSENRAAAALSRDYPGGR 224

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----HY 187
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 225 AAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVDAAAQDPLIRYFSTDRS 283

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 284 TTVRPGDGELLYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRTTVVLLGAP 343

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 344 TRAGVSSDAIKIHRW 358


>gi|283769437|ref|ZP_06342335.1| serine-type D-Ala-D-Ala carboxypeptidase [Bulleidia extructa W1219]
 gi|283103962|gb|EFC05347.1| serine-type D-Ala-D-Ala carboxypeptidase [Bulleidia extructa W1219]
          Length = 315

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 5/231 (2%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           +  K  +Y LLD   G V+ E        PASLTK+M  YV  + +++K+        + 
Sbjct: 26  QNTKSSHYLLLDLEQGEVLEEKGKSEKIYPASLTKMMVVYVALNHIEDKQKTAIISPNLL 85

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           K   +   + S +   + ++ ++ L  + + S  D ++ +A++L  T   FVQ MN  +K
Sbjct: 86  KELRQQGAAISNYPSQTPISYEDLLYGIALPSGADCSITLAKALFPTTDAFVQAMNQEAK 145

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL-----EIKGK 198
            LG+  +HF N  G+    HYTT  D++        +     ++  IK        +   
Sbjct: 146 QLGMLHSHFDNVTGLHSPNHYTTLEDLSRFLKVALKNQHFRNYFSAIKYTSKTGITLSHT 205

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            Y +         G  G KTG+T  +G  +     Q     + +  G    
Sbjct: 206 LYRDIQKTGLKIPGYQGSKTGYTAQAGHCLALWFNQKGHPFLYLATGGPGD 256


>gi|238917030|ref|YP_002930547.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium eligens ATCC
           27750]
 gi|238872390|gb|ACR72100.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium eligens ATCC
           27750]
          Length = 415

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 123/386 (31%), Gaps = 60/386 (15%)

Query: 1   MRQF------LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           M+ F      ++++++ +     P  + A      Y  L+D+++G +++ +      + A
Sbjct: 1   MKSFKNFSIIILVLSLLVCCIFCPVTTQAAGLYSKYSVLIDSDSGRILSGSNETTAVSMA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNALKLL 111
           S TK+MT  +      +   + T+    S      +                +  +    
Sbjct: 61  STTKIMTLIIALENCDKNFVVTTSAYAASMPDVQLNAVTGEQFIINDLYYSLMLESHNDS 120

Query: 112 IVKSANDIAVAIAESLCKTEKK----------------------------FVQHMNNTSK 143
            V  A + A  +         +                            F   MN  + 
Sbjct: 121 AVIIAENAAYYLLCKNPSLRSETPFINNYNYDSSFLSEINHEQSEILVHIFTGLMNEKAD 180

Query: 144 NLGLSATHFMNAHGVVQHG----HYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEIK 196
           ++ LS T+++  +G+        H+TTA D+A        +           +       
Sbjct: 181 DILLSDTYYITPNGLDAEDNYSFHHTTAYDLAKTMAYCINNEDFLYITQTVSKTISDTTG 240

Query: 197 GKKYP--NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNT 251
              Y   N N  +    G    KTGFT  +G+  V +    +++L   +L      ++N 
Sbjct: 241 RYHYQLNNKNRLLNPNEGIISGKTGFTNKAGYCYVCAYKDKNRTLCIALLACGWPPNKNY 300

Query: 252 RNKVSASLLSMGFYNKTDRKKIN-----YIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
           +   +  L+++G      +K  N     YI     + +    +P+ + E      + +N 
Sbjct: 301 KWSDANYLIALG-KKYNKQKYFNCEYTFYIPVSKGKYSFCELIPDSAVEFLACDDDSVNI 359

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNK 332
              +      E+         +    
Sbjct: 360 QIDI-----PETLTAPVNSAQIYGTI 380


>gi|225567960|ref|ZP_03776985.1| hypothetical protein CLOHYLEM_04033 [Clostridium hylemonae DSM
           15053]
 gi|225163248|gb|EEG75867.1| hypothetical protein CLOHYLEM_04033 [Clostridium hylemonae DSM
           15053]
          Length = 311

 Score =  100 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 105/268 (39%), Gaps = 18/268 (6%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + + +   P     +T  L    L D +   V           PAS TK+MTA V     
Sbjct: 40  LCVTAKDVPLADAPDTGSLSAAALFDVDKSDVDFAYNVHERLYPASTTKIMTALVAIKNA 99

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
                 +T      +++          K G  +TL+  L  L++ S ND AVAIA+ +  
Sbjct: 100 DLSDV-VTVGADADESSFAADEQTCGLKAGDRLTLEALLNGLLLYSGNDNAVAIADYVGG 158

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           + + F + MN  +  L  + +HF+N++G+    HYTTA D+ ++         +++   +
Sbjct: 159 SMEGFAEMMNEEAARLMATESHFLNSNGLHNEDHYTTAYDLYLIFNECI-KHEEFLDIIR 217

Query: 190 IKGLEI------KGKKYPNTNWAVGTFLG---------ADGMKTGFTCASGFNIVASAIQ 234
            K            K+           LG           G KTG T  +G  ++  +  
Sbjct: 218 AKSYTADITGADGNKRQITWEPTSFYALGEAALPQNATIIGGKTGTTKEAGNCLILLSED 277

Query: 235 GD-QSLIAVILGALDRNTRNKVSASLLS 261
           G  +  I++++GA  +    +    L+ 
Sbjct: 278 GQSRPFISIVMGADTKAILYEDMTGLIE 305


>gi|221196175|ref|ZP_03569222.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2M]
 gi|221202849|ref|ZP_03575868.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2]
 gi|221176783|gb|EEE09211.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2]
 gi|221182729|gb|EEE15129.1| D-alanyl-D-alanine carboxypeptidase family protein [Burkholderia
           multivorans CGD2M]
          Length = 364

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 91/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 108 LLASCGYNPRAVRSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 167

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L        +      + S  + GS ++  +   + ++ S N  A A++       
Sbjct: 168 LNGVLRVTA---NDRDTIKFTGSRLQVGSELSRRDMFHIALMSSENRAAAALSRDYPGGR 224

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----HY 187
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 225 AAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVDAAAQDPLIRYFSTDRS 283

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 284 TTVRPGDGELLYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRTTVVLLGAP 343

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 344 TRAGVSSDAIRIHRW 358


>gi|153952688|ref|YP_001393453.1| D-alanyl-D-alanine carboxypeptidase precursor [Clostridium kluyveri
           DSM 555]
 gi|146345569|gb|EDK32105.1| Predicted D-alanyl-D-alanine carboxypeptidase precursor
           [Clostridium kluyveri DSM 555]
          Length = 310

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 95/247 (38%), Gaps = 17/247 (6%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                  +    P   L+      ++ +   +    PASLTK+MTA V    L   K  +
Sbjct: 47  STVSISPDKLNSPNVILIRLKDHAILMQKNSEEKIYPASLTKIMTAIVAIENLPNLKEEI 106

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
               +  +   E   S + F+ G  ++  + L   ++ S  +  + +A  +  +E+ FV+
Sbjct: 107 RLTNSTFQRLYEADASMTGFQPGEKVSAIDLLYGALLPSGAESCIGLANQIAGSEQGFVK 166

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  + +LG+  THF N  G+    HYTT  ++A+L      +      +   +     
Sbjct: 167 MMNQKAADLGMDNTHFENVTGIHNENHYTTVENLAVLLSYALQNDTFRDIFTSSRHSTQP 226

Query: 197 GKKYP--------------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             K+P              N N   G      G KTG+T   G  + + A  G Q  I +
Sbjct: 227 TNKHPDGITFYSTMFEELDNQNIIDGE---ILGGKTGYTDEVGLCLASLAKVGRQEYILI 283

Query: 243 ILGALDR 249
             GA   
Sbjct: 284 SAGAKGD 290


>gi|330684640|gb|EGG96344.1| serine-type D-Ala-D-Ala carboxypeptidase [Staphylococcus
           epidermidis VCU121]
          Length = 412

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 71/368 (19%), Positives = 145/368 (39%), Gaps = 50/368 (13%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYY---------------TLLDTNTGHVIAE 44
           M++ F  ++ + M   +      AE + +                   ++ T  G ++ +
Sbjct: 1   MKKVFTSLMMIMMCLVLISPTVFAEQSPVDVAKQEHQDIDKQYNPKGMIVTTKDGQILYD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGS 100
            + +   +PAS TKLMT  +V+  +K  K  +   + I+    +       +    K+G+
Sbjct: 61  YHGNTQVDPASTTKLMTMNLVYDDIKSGKIKMNDKVKITSRYEKMSELPNLTTFPLKEGT 120

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG--- 157
           T+T++  LK   ++S+N   + +AE +  +  KF   MN  +K+LG+  T F N  G   
Sbjct: 121 TVTINQLLKQAALESSNAATLVLAEHIDGSSSKFTDRMNQKAKDLGMKDTKFTNPSGANN 180

Query: 158 -----------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-- 204
                            +TTARDM++LS  I    P  +   ++   +   ++  NTN  
Sbjct: 181 KILKPYEPKSYKDDTISHTTARDMSLLSNHILNAHPDVLKITKLSKDKQSNQELHNTNTS 240

Query: 205 --WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVS 256
                      DG+KTG T  +G+N+  +A +    ++  I           ++ R K++
Sbjct: 241 LPNEADGMKDVDGLKTG-TSDNGYNLELTAKRNHLRIVTGIFNVKPYPDEQAKHARQKLA 299

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
            +L    F     RK I+    +     +  +   + +++     +  +         ++
Sbjct: 300 NALTEHAFKQYDYRKVISKGEHE-----IDGKKYEVKKDLYDLVPKDKSKYQLKVSEDNQ 354

Query: 317 ESHFIDFE 324
                D +
Sbjct: 355 LYVDYDRQ 362


>gi|256027623|ref|ZP_05441457.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. D11]
 gi|289765581|ref|ZP_06524959.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. D11]
 gi|289717136|gb|EFD81148.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. D11]
          Length = 407

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L   + ISK   +
Sbjct: 153 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLNDSVRISKTPLK 211

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE +   +   FV  MN   + LGL
Sbjct: 212 YGGSGIALKAGQMFILEDLIKAAAVYSANNATYAIAEYVGNGSIFGFVTKMNKKLRELGL 271

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +       
Sbjct: 272 QNEIKYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKTTKIHNDKISI 331

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++      +I V+LG     TR+ +  ++L
Sbjct: 332 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFEGTDVIIVVLGGETYKTRDNLVRNIL 390

Query: 261 SMGFYNKTDR 270
           ++   N T +
Sbjct: 391 NILSENYTVK 400


>gi|168186694|ref|ZP_02621329.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum C str.
           Eklund]
 gi|169295300|gb|EDS77433.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum C str.
           Eklund]
          Length = 443

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 73/366 (19%), Positives = 130/366 (35%), Gaps = 43/366 (11%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH-PWNPASLTKLMTAYVVFSFLKE 71
            +  F               ++D  TG +I     D  P  PAS TKL+TA ++    K 
Sbjct: 19  CTTAFAANLNEPNIVGKSAIVIDAKTGEIIYAKDVDASPMYPASTTKLLTALLLAENKKP 78

Query: 72  -KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                 T         +         K G TM+ D+A+K L++ SANDIA  IA+++   
Sbjct: 79  TDMLTYTEGSLKQPEYTLRSFLKGKLKVGDTMSADDAMKGLLLHSANDIAYMIADNVGGN 138

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--HGHYTTARDMAILSWRIKTDFPQYMHYF 188
            + F + MN+    LGL  THF+  +G+      HYT+A D++I+     ++        
Sbjct: 139 AENFAKMMNDKVSQLGLKNTHFVTPNGLDNGISNHYTSAYDLSIIGKAAYSNEWVRNTMN 198

Query: 189 QIKG----------LEIKGKKY--------------PNTNWAVGTFLGADGMKTGFTCAS 224
             +                 K                N+     +     G KTG+T  +
Sbjct: 199 LKQSKLELSNGILGYPTNRNKLLGTTLDSNFLSKLGNNSKETPVSDAICIGGKTGYTTKA 258

Query: 225 GFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNK-----------TDR 270
           G  +VA   + ++ LI V++ +    +     K  + +++  +  K              
Sbjct: 259 GRCLVAMFNKDNRVLIGVVMKSAYDKNDTYVFKDMSKIINFAYSQKQVPLYKANTELKTL 318

Query: 271 KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                 ++ F      N    + E+V     E+     + +  +  E       K T + 
Sbjct: 319 PIQYRPLRFFGPTKTINVPVTVKEDVTYYDNELNKSQIKTEF-ELPELSIGQLSKNTSVG 377

Query: 331 NKITKK 336
             + K+
Sbjct: 378 KLVLKE 383


>gi|134293778|ref|YP_001117514.1| murein-DD-endopeptidase [Burkholderia vietnamiensis G4]
 gi|134136935|gb|ABO58049.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia vietnamiensis G4]
          Length = 363

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 89/255 (34%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         T       ++D ++G  +           AS++KLMTA V     + 
Sbjct: 107 LLASCGYTPRAVRTLHSRAAYVVDVDSGTPLLARNARTVRPIASISKLMTALVARDADRP 166

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L       ++      + S    G+ ++      + ++ S N  A A++       
Sbjct: 167 LNGVLRVTA---RDRDTIKFTGSRLPVGAELSRRQMFHIALMSSENRAAAALSRDYPGGR 223

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQI 190
             FV  MN  ++ LG+ ATHF    G+    + +TA D+A L      D           
Sbjct: 224 AAFVGAMNRKARQLGMRATHFREPTGL-SPHNVSTAEDLARLVGAAAHDPLIRYFSTDTS 282

Query: 191 KGLEIKGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             +E    +    N       G       KTGF   SG  +V       +    V+LGA 
Sbjct: 283 TTIEAGDGELLYVNSDPLVRYGRLPIRLQKTGFINESGHGVVMRTRVHGRRETIVLLGAS 342

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 343 TRAGVSSDALKIHRW 357


>gi|219853360|ref|YP_002470482.1| hypothetical protein CKR_0017 [Clostridium kluyveri NBRC 12016]
 gi|219567084|dbj|BAH05068.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 316

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 56/247 (22%), Positives = 95/247 (38%), Gaps = 17/247 (6%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
                  +    P   L+      ++ +   +    PASLTK+MTA V    L   K  +
Sbjct: 53  STVSISPDKLNSPNVILIRLKDHAILMQKNSEEKIYPASLTKIMTAIVAIENLPNLKEEI 112

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
               +  +   E   S + F+ G  ++  + L   ++ S  +  + +A  +  +E+ FV+
Sbjct: 113 RLTNSTFQRLYEADASMTGFQPGEKVSAIDLLYGALLPSGAESCIGLANQIAGSEQGFVK 172

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  + +LG+  THF N  G+    HYTT  ++A+L      +      +   +     
Sbjct: 173 MMNQKAADLGMDNTHFENVTGIHNENHYTTVENLAVLLSYALQNDTFRDIFTSSRHSTQP 232

Query: 197 GKKYP--------------NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             K+P              N N   G      G KTG+T   G  + + A  G Q  I +
Sbjct: 233 TNKHPDGITFYSTMFEELDNQNIIDGE---ILGGKTGYTDEVGLCLASLAKVGRQEYILI 289

Query: 243 ILGALDR 249
             GA   
Sbjct: 290 SAGAKGD 296


>gi|118161327|gb|ABK64011.1| putative carboxypeptidase [Janthinobacterium lividum]
          Length = 583

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 85/254 (33%), Gaps = 10/254 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +        +A      +  + D  +G V+     D     AS+TKLMTA VV       
Sbjct: 325 MLAEAATGMLALPVSAKHMLVFDDASGKVLMAKDADAVVPIASITKLMTAMVVLDAG--- 381

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
                  + I +   +      +       ++    L+L ++ S N  A A+A +     
Sbjct: 382 -LDPDEQLRIVRADGDASLQRHSLLADGVAVSRGALLQLALLPSENRAAAALARTYPGGN 440

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             F Q +    ++LGL  T      G     + +TA ++A +                 +
Sbjct: 441 AAFAQALQAKIRHLGLVRTTLTEPVG-SSPANTSTASEVAKIVAAAARYPDIARITSHRQ 499

Query: 192 GL---EIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                  K +   NTN  VG         KTG +  +G  +      G + +  V+L A 
Sbjct: 500 ASVAVNGKTRTLHNTNPLVGGKGWDILLSKTGSSNEAGSCLTMRMRSGGKHVTVVLLDAD 559

Query: 248 DRNTRNKVSASLLS 261
               R+  +  +  
Sbjct: 560 GAQRRSLDAGHIRD 573


>gi|237743211|ref|ZP_04573692.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 7_1]
 gi|229433507|gb|EEO43719.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 7_1]
          Length = 389

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L   + ISK   +
Sbjct: 135 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLNDSVRISKTPLK 193

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE +   +   FV  MN   + LGL
Sbjct: 194 YGGSGIALKAGQMFILEDLIKAAAVYSANNATYAIAEYVGNGSIFGFVTKMNKKLRELGL 253

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +       
Sbjct: 254 QNEIKYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKTTKIHNDKISI 313

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++      +I V+LG     TR+ +  ++L
Sbjct: 314 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFEGTDVIIVVLGGETYKTRDNLVRNIL 372

Query: 261 SMGFYNKTDR 270
           ++   N T +
Sbjct: 373 NILSENYTVK 382


>gi|329116007|ref|ZP_08244724.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus parauberis
           NCFD 2020]
 gi|326906412|gb|EGE53326.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus parauberis
           NCFD 2020]
          Length = 391

 Score =  100 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 62/318 (19%), Positives = 131/318 (41%), Gaps = 52/318 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFL-----------------SIAETNKLPYYTLLDTNTGHVIA 43
           +++ ++++   +       +                 S+   +K     +++   G +I 
Sbjct: 2   IKKIMLLLCFFVALIPLFSVKGEEQDDILSLTRRYGYSVKPADKPVSSIVVNAKNGDIIW 61

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
           ++  D   +PAS++KL T Y++F  +K  K  L+  I  S+   +       SN+    G
Sbjct: 62  QDNIDASRDPASMSKLFTLYLLFEDIKAGKLSLSDHIRASQTDQDISQIYAISNNKIVAG 121

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEK-KFVQHMNNTSKNLGLSATHFMNAHG- 157
               + + + +  V S+N   + +A  +   +   F+  +N T++ LG+  T F NA G 
Sbjct: 122 VDYPIRDLITMTAVPSSNAATLMLANYMSDNDAGAFINRINVTAQKLGMKNTFFTNASGA 181

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + T+ARD+AIL +    ++P+ + +     ++   +     
Sbjct: 182 VASAFEGHYSPEGYDSNQPNKTSARDLAILCYHFLKNYPEILEFTCKSSVKTMDRTPYEE 241

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DG+KTG + ++ FN V +A + D  LI++++G  D +    
Sbjct: 242 EFHSYNYSLPGDKFGIKGVDGLKTGSSPSAAFNAVITAKRDDTRLISIVMGVGDWSDQEG 301

Query: 252 ---RNKVSASLLSMGFYN 266
              R+    ++   GF N
Sbjct: 302 EFHRHPFINAITEYGFTN 319


>gi|229015415|ref|ZP_04172419.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1273]
 gi|228745873|gb|EEL95871.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus AH1273]
          Length = 244

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 16/186 (8%)

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQI-----KGLEIKGKKYPNTNWA----VGTFLGADG 215
            +ARD+AIL+ R+  DFP+ +   +I     +       + PN NW     +  + G DG
Sbjct: 1   MSARDVAILAQRLIQDFPKTLDIAKISKKVFREGTPDRIEMPNWNWMLKGLIKEYEGVDG 60

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +KTG T  +G     +  +     I+V++       R   +  L   GF N   +K    
Sbjct: 61  LKTGSTPEAGDCFTGTIERNGMRFISVVIKTNSHTARFDETKKLYDYGFANFEMKKMYEK 120

Query: 276 IIKDFYQQNLSNEVPN-------ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
                 ++ +  E            + V     +      + +  +  +      +K   
Sbjct: 121 GSSVKGKETVRVENAKDKDVAVQTKQAVSLPVPKGSKDVYKTEFKEGNKGQEAPVKKGVS 180

Query: 329 LKNKIT 334
           L   + 
Sbjct: 181 LGQMVI 186


>gi|116619089|ref|YP_819460.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116097936|gb|ABJ63087.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 299

 Score =  100 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 58/297 (19%), Positives = 111/297 (37%), Gaps = 37/297 (12%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLSIAE-------------TNKLPYYTLLDTNTGHVIAEN 45
           M++   L    +  LS  FP     +             T       +++ +T  +++E 
Sbjct: 1   MKKSGLLAAFCIVTLSTAFPVNGQQQIQASEKKKSIKKITTTAKAAVVMNADTDKILSEK 60

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                   AS++KLMT Y+V   L      +       K   E   ++       + + D
Sbjct: 61  NAHKSLAIASISKLMTGYLVLKKLPLGT-QVQPSSNTMKIGEESNLASVNLDSNQSYSAD 119

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------- 158
             L+  +  SAND A+A+ + +  ++ KFV+ M  TS++ GL++  + NA G+       
Sbjct: 120 ELLRAALQLSANDAAIALGDQVSGSQTKFVKLMTKTSQSWGLASAQWYNAAGIRNDEAMD 179

Query: 159 ------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----NTNWAV 207
                     +  +A D+A+++  I    P+          +  G           N+  
Sbjct: 180 DGVKAPDNAENKMSAVDVALMTDNILEKTPRIKRIVHQSQNQFDGITQDSNYVLMKNYFK 239

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL---DRNTRNKVSASLLS 261
            T     G K G +  SG + V       +  I V+L A    + +   + +  +L+
Sbjct: 240 NTKYTVTGAKLGISVKSGVSYVGLFTYKGKHYITVVLHADQYTNLSAVFRETKRILN 296


>gi|311106462|ref|YP_003979315.1| D-alanyl-D-alanine endopeptidase 1 [Achromobacter xylosoxidans A8]
 gi|310761151|gb|ADP16600.1| D-alanyl-D-alanine endopeptidase 1 [Achromobacter xylosoxidans A8]
          Length = 331

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 93/241 (38%), Gaps = 15/241 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV----FSFLKEKKAMLTTPI 80
             K     + D +T  V+           AS+TKLMTA  +        +      +   
Sbjct: 89  KLKSSTILVQDLDTSEVLFARNEGAVRPIASITKLMTALTLVKAGLPMDEIITIDASDTR 148

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           + S+         S    G+ ++  + L+L +V S N  A A+  +       FV  MN 
Sbjct: 149 SASELP-------SRLTAGTKLSRADLLRLALVPSENSAAQALGRTYTGGSAAFVAAMNA 201

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            ++ LG++ + F    G+      ++ARD+  L     +  P    Y      +  G+ +
Sbjct: 202 EARALGMTDSSFAEPSGLSNENQ-SSARDLVKLLA-AISAQPLISQYTGETSYQAAGQTF 259

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-DRNTRNKVSAS 258
            NTN  VG         KTG T  +G  +V +   G ++L  V+L A     +R   +  
Sbjct: 260 RNTNILVGRPQWDILVSKTGTTREAGDCLVMAVKVGKRNLAMVLLNAQGTSGSRFGDAVR 319

Query: 259 L 259
           L
Sbjct: 320 L 320


>gi|300854622|ref|YP_003779606.1| D-alanyl-D-alanine carboxypeptidase [Clostridium ljungdahlii DSM
           13528]
 gi|300434737|gb|ADK14504.1| D-alanyl-D-alanine carboxypeptidase precursor [Clostridium
           ljungdahlii DSM 13528]
          Length = 325

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 91/238 (38%), Gaps = 11/238 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K     L+       + +   +    PASLTK+MTA V    L      +    +   
Sbjct: 70  KLKSHNAILIRLKDQTTLMQKNSEEKIYPASLTKMMTAIVAIENLPNLNEEVKLTNSAFH 129

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F+    +T  + L  +++ S  +  + +AE +  +E+ FV+ MN  +  
Sbjct: 130 ELHGEDASMAGFQPNEQVTALDLLYGILLPSGAECCIGLAEQIAGSEQNFVKMMNQKAAE 189

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT- 203
           LG+  THF N  G+    HYTT +D+AIL      +      +   +       K+P   
Sbjct: 190 LGMRNTHFENTTGLQNENHYTTVKDLAILLSYALQNDTFREIFTSSRHSTQPTNKHPGGI 249

Query: 204 ----------NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                     N          G KTG+T  +G  + + A  G Q  I +  GA   + 
Sbjct: 250 TFYSTMFKGLNNQNIIGGEILGGKTGYTNEAGLCLASLAKVGKQDYILISAGAKGDHN 307


>gi|145487772|ref|XP_001429891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124396985|emb|CAK62493.1| unnamed protein product [Paramecium tetraurelia]
          Length = 318

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 110/276 (39%), Gaps = 32/276 (11%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
                    + ++ T+ G  +A   P      ASLTK+MTAY         +    T I 
Sbjct: 19  NPPQTTALSWCIV-TSIGDELASKSPSLKLEVASLTKIMTAYTAIQLSDIIQFQNETFIR 77

Query: 82  ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC------------- 128
           I + A++   +++  ++  T++L+  L  L++ S ND A++IA                 
Sbjct: 78  IPRIATQIGGTSAFLRRDDTLSLEELLYALMLPSGNDAAISIALHFGSILNTHRRQKIAS 137

Query: 129 ----------------KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
                               +FV+ MN  +  LG+  + F N HG+    + +TA DM  
Sbjct: 138 YITCDTIQGFYDDTQMSNMNRFVRQMNENAMKLGMRDSQFSNPHGLSSKANKSTALDMCR 197

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           +S       P        K    +  ++ NTN  +  F    G+KTG T  +G  +  S 
Sbjct: 198 MSS-AYMKIPILKQICNSKSYSCRNYEWFNTN-QLLHFENYSGIKTGITPNAGACLAVSY 255

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                S+I V++GA D+  R + +  L++      T
Sbjct: 256 ESLLGSIIVVLIGAKDQKRRFEETDKLINWVSREYT 291


>gi|159038217|ref|YP_001537470.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora arenicola
           CNS-205]
 gi|157917052|gb|ABV98479.1| Serine-type D-Ala-D-Ala carboxypeptidase [Salinispora arenicola
           CNS-205]
          Length = 403

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 109/293 (37%), Gaps = 16/293 (5%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +      A       + + D  +G V+    P     PAS+ K     ++ +     +
Sbjct: 74  LVVPADTPKAPAVTATSWVVADLASGRVLGGCGPHQHRTPASVQK-----LLLAAALLPR 128

Query: 74  AMLTTPITISK---NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLC 128
              T  + +++   +  +   S      G   T+      L+++S ND A  +A      
Sbjct: 129 LDPTKVVEVTREDLDDLDPASSLMGVVAGGRYTVKELWLGLLLQSGNDAANVLARIGGGS 188

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW-RIKTDFPQYMHY 187
              +  VQ MN  ++ L  + TH +   G+   G YT+A D+A+++      D  +    
Sbjct: 189 AGREGGVQVMNEEARRLRANQTHAVTPSGLDGTGQYTSAYDLALIARATFARDDFRRYIA 248

Query: 188 FQIKGLEIKGKK----YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            +   L     +           +GT+ G  G KTGFT  +    V  A +  + L   +
Sbjct: 249 TRTAHLPSGPGRSALALTGDETLLGTYPGMLGGKTGFTDLARQTYVGVAERDGRRLAVTL 308

Query: 244 LGALDRN-TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           LGA          +A+LL+ GF    D    + +  +  +++    V    ++
Sbjct: 309 LGAETAPLGSLGEAAALLNWGFALAPDDAVGHLVAPEQAKKDKDKRVVVAGDD 361


>gi|172063483|ref|YP_001811134.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MC40-6]
 gi|171996000|gb|ACB66918.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           ambifaria MC40-6]
          Length = 359

 Score = 99.7 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 90/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       LLD ++G  +           AS++KLMTA V     + 
Sbjct: 103 LLASCGYSPRAVRSLHSRVAYLLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 162

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L      S++      + S    G+ ++      + ++ S N  A A++       
Sbjct: 163 LNGVL---RVTSRDRDTIKFTGSRLPIGAELSRRQMFHIALMSSENRAAAALSRDYPGGR 219

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-HYFQI 190
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 220 AAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDTS 278

Query: 191 KGLEIKGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++    +    N       G       KTGF   SG  +V       +    V+LGA 
Sbjct: 279 TTVQAGDGELLYVNSDPLVRNGSLPIRLQKTGFINESGHGVVMRMRVKGRRETIVLLGAP 338

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 339 TRAGVSSDAVKIHRW 353


>gi|27466953|ref|NP_763590.1| penicillin binding protein 4 [Staphylococcus epidermidis ATCC
           12228]
 gi|27314495|gb|AAO03632.1|AE016744_35 penicillin binding protein 4 [Staphylococcus epidermidis ATCC
           12228]
          Length = 407

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 78/355 (21%), Positives = 140/355 (39%), Gaps = 44/355 (12%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY----------TLLDTNTGHVIAENYPDHPWNP 53
            + +   +  +N    L+  E                  ++ T  G ++ + + D   +P
Sbjct: 2   LISLFCCSFFTNTTYALTPVEITNNSKAQLDEGLNPRGAVVTTTNGQILYKYHKDKKVDP 61

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTLDNALK 109
           AS TKLMT  V++  +   K  L   + IS+   +       +    KKG T T++  LK
Sbjct: 62  ASTTKLMTMLVIYDDINHSKVSLKDKVKISERYQKMSQLPNLTTFPLKKGQTYTIEQLLK 121

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG------------ 157
              + S+N   + +AE +     KF   MN  ++ LG++ THF N  G            
Sbjct: 122 QAALNSSNAATLVLAEHIDGDISKFTDRMNREAQLLGMNQTHFTNPSGANNKIIKPYEPK 181

Query: 158 --VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT----FL 211
               +   YTTA DMAIL+  +   +P  +   Q++      ++  NTN ++        
Sbjct: 182 KYKDETSSYTTANDMAILTNHLLRKYPNILKMTQLETDTQYNQQLHNTNLSLPHQSLGMK 241

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDRNTRNKVSASLLSMGFY 265
             DG+KTG T   G+N+  +A +    +   +           +  R+KV+ +L    F 
Sbjct: 242 NVDGLKTG-TSKEGYNLALTAKKDQLRVNTNLFNIQPYPSEKAKFARHKVANALTQNAFK 300

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           N T RK I+          +  +  N+ E++     +  +        K++ S  
Sbjct: 301 NYTYRKVISKGAH-----QIDGKTYNVKEDLYDVVPKDNSKYELKISEKNQLSVK 350


>gi|118362318|ref|XP_001014386.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89296153|gb|EAR94141.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 988

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 121/312 (38%), Gaps = 42/312 (13%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D      I       P   ASLTK+MT Y++   +++KK   T  I +S+
Sbjct: 649 NLTAKSVCIFDVEKNKPILCLKGKKPREVASLTKIMTCYIICQAIQKKKIKQTEQIKVSR 708

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL----------------- 127
            A+    +++  + G  +++ + L  L++ S ND A A+AE +                 
Sbjct: 709 AAASMIGTSAYLRSGDQLSVWDLLHGLMLPSGNDAAFALAEYMGRILFFEDNDYKEQLQQ 768

Query: 128 ----------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                         K F++ MN  +K+L L+ T + N HG+V   + ++A D+  LS   
Sbjct: 769 NPNSFENCKAKDAIKCFLKEMNRVAKDLKLANTKYSNPHGLVNKSNRSSALDICKLSAHC 828

Query: 178 KTDFPQYMHYFQIKGLE---------IKGKKYPNTNWAVGTFLGAD-GMKTGFTCASGFN 227
            T    +    + K            I+   + NTN  +  +     G+KTG TC +G  
Sbjct: 829 LTKSQLFRQIVKTKQYTCQVRNKQGSIRIASWENTNKCLLRYNTICDGVKTGVTCTAGPC 888

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM-----GFYNKTDRKKINYIIKDFYQ 282
           +  S    D+  I  IL       R   S  + +      G     + K     +K  Y+
Sbjct: 889 LTTSWRVKDRHFIITILKCDSLELRYSESQRVFAWICEKLGIELSAEEKMPYEKVKQLYK 948

Query: 283 QNLSNEVPNISE 294
           +N    + ++ E
Sbjct: 949 RNSVESIQSMKE 960


>gi|237740954|ref|ZP_04571435.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 4_1_13]
 gi|229430998|gb|EEO41210.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium sp. 4_1_13]
          Length = 414

 Score = 99.7 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L   + ISKN  +
Sbjct: 160 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLNDSVRISKNPLK 218

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE + K +   FV  MN   K LGL
Sbjct: 219 YGGSGIALKVGQMFVLEDLIKASAVYSANNATYAIAEYVGKGSVFSFVTKMNRKLKELGL 278

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +       
Sbjct: 279 QNEIRYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKSTKIHNGKISI 338

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++   D  +I V++G     TR+K+  S+L
Sbjct: 339 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFQDTDVIIVVMGGETYKTRDKIVLSVL 397

Query: 261 SMGFYNKTDR 270
            +   N T +
Sbjct: 398 DILNNNYTVK 407


>gi|322411115|gb|EFY02023.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 393

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 75/341 (21%), Positives = 138/341 (40%), Gaps = 50/341 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENY 46
           +++  ++I   M   I P                +I+E N+     ++D NT  ++ ++ 
Sbjct: 2   IKRIALVIFTVMCFLIMPVSHAEDIMDITRQAGYTISEVNRPKASIVVDANTSDILWQDN 61

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTM 102
            D P +PAS++K+ T YV+F  L + K  + T +T ++           SN+    G   
Sbjct: 62  IDIPRDPASMSKMFTLYVLFEELAKGKITMDTTVTATETDQAIAKIYEISNNNIVAGVAY 121

Query: 103 TLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G    
Sbjct: 122 PIRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKKLGMTNTHFSNASGAAAQ 181

Query: 162 ---------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
                           + TTARD+A L +     +P  + +     +           + 
Sbjct: 182 AFQGYYNPTKYDLSAANITTARDLAKLLYAFLKKYPHIIDFTNQSVVHTMVGTPYEEEFH 241

Query: 207 VGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------ 251
              +          G DG+KTG + ++ FN + +A +G+  LI +++G  D +       
Sbjct: 242 TYNYSLPNNQFGMEGVDGLKTGSSPSAAFNAMVTAKRGNTRLITIVMGVGDWSDQNGEFY 301

Query: 252 RNKVSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPN 291
           R+    +L   GF  +K+  K     ++    Q     +P 
Sbjct: 302 RHPFVNALTEKGFSDSKSLTKAARKKLEKLVSQKKKENLPK 342


>gi|331699048|ref|YP_004335287.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953737|gb|AEA27434.1| Serine-type D-Ala-D-Ala carboxypeptidase [Pseudonocardia
           dioxanivorans CB1190]
          Length = 411

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 96/259 (37%), Gaps = 12/259 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L+      ++        + L D ++G V+A   P     PAS        ++ + +   
Sbjct: 68  LALPPGAPALPAGIDAAGWVLADLDSGVVLAARDPHGRQRPAST-----LKLLTTLVVLD 122

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L   +    +  +   S +    G + T+   L  L++ S ND A A+A +L    +
Sbjct: 123 RLPLDQTVVGDTSDVQVDGSRAGIGPGGSYTVQQLLTGLLLNSGNDTAHALARTLGGVPR 182

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYMHYFQI 190
                M   +  +G   T      G+   G  T+A D+A+       +  F +      +
Sbjct: 183 TL-DLMQQRAAAMGALDTRPATPSGLDGPGMSTSAYDLALFLRAALRNPTFAELTQLRLV 241

Query: 191 KGLEIKG---KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                         N +  + ++ GA G KTGFT A+    V +A +    L+  ++   
Sbjct: 242 AFPGFGDRPGFMLSNDDPLLSSYDGALGGKTGFTDAARHTFVGAAQRDGHRLVVALVRGE 301

Query: 248 DRNTR-NKVSASLLSMGFY 265
               R    +++LL  GF 
Sbjct: 302 QHPVRMVAQASALLDYGFA 320


>gi|78062125|ref|YP_372033.1| murein-DD-endopeptidase [Burkholderia sp. 383]
 gi|77970010|gb|ABB11389.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia sp. 383]
          Length = 364

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 89/255 (34%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 108 LMASCGYSPRAVNSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 167

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L        +      + S  + GS ++      + ++ S N  A A++       
Sbjct: 168 LNGVLRVTAH---DRDTIKFTGSRLQVGSELSRREMFHIALMSSENRAAAALSRDYPGGR 224

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----HY 187
             FV  MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 225 AAFVNAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLAKLVGAAAQDPLIRYFSTDTS 283

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 284 TTVRPGDGELLYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRETVVLLGAP 343

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 344 TRAGVSSDAIKIHRW 358


>gi|78044170|ref|YP_359992.1| D-alanyl-D-alanine carboxypeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996285|gb|ABB15184.1| D-alanyl-D-alanine carboxypeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 325

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 13/229 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K   Y      T  +I     D P  PAS TK+ TA                 +T+  
Sbjct: 22  EIKAKAYYFFIPTTNQIIEAKNQDFPLPPASTTKIATALTALDLYPR-----NFTLTVKP 76

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            A     +    K    + + + +  L+++S ND A A+A      ++ F+  +N   K 
Sbjct: 77  EAVRVTGTKIYLKPNEKIAVIDLVYGLMLESGNDAANALAW--VVGKENFMLILNYYLKQ 134

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE----IKGKKY 200
           +GL++  F N  G+   GH  +A+D+ +L++       ++    + K  E     K + +
Sbjct: 135 MGLTSVSFKNPSGLSAPGHKISAKDLCVLTFYALLK-DEFADICKTKQYEAQSGFKPRVF 193

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
            NTN  +       G+KTG T  +G  +V  A +G+  LI  +L   DR
Sbjct: 194 HNTNRLLAVDSRVIGVKTGTTNEAGKCLVG-AWRGNSFLIGTVLNCPDR 241


>gi|126642515|ref|YP_001085499.1| putative D-ala-D-ala-carboxypeptidase penicillin-binding protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 376

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 10/280 (3%)

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +M AY+    +K  K  L   IT +   +  ++  S    K G  +++D  L  LIV SA
Sbjct: 1   MMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIVMSA 60

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND AV +AE +      FVQ MN  ++ LG+  THF N  G+    HYTTA D+++LS  
Sbjct: 61  NDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLLSQA 120

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG- 235
           +    P+Y+HY ++       + +  TN A+      DG+KTG+T A+G+N+  +A +  
Sbjct: 121 VIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTASRPS 180

Query: 236 ------DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
                  + L+ ++LG      R +++  L+++ +    D   I           + + +
Sbjct: 181 FSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIKSTL 240

Query: 290 PNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
                E         +   +     D  +     ++I +L
Sbjct: 241 KMFKVETKQPTIVTTSLYAEP-TPIDLNTFDYATQRIQVL 279


>gi|206563597|ref|YP_002234360.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia cenocepacia
           J2315]
 gi|198039637|emb|CAR55605.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
           precursor) [Burkholderia cenocepacia J2315]
          Length = 360

 Score = 99.3 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 91/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 104 LLASCGYTPRAVGSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 163

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L       ++      + S  + GS ++      + ++ S N  A A++       
Sbjct: 164 LNGVLRVTA---RDRDTIKFTGSRLQVGSELSRREMFHIALMSSENRAAAALSRDYPGGR 220

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH----Y 187
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 221 VAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDLS 279

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 280 TTVRPGDGELVYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRETVVLLGAP 339

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 340 TRAGVSSDAIRIHRW 354


>gi|251781774|ref|YP_002996076.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242390403|dbj|BAH80862.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|323126581|gb|ADX23878.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 393

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 50/341 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENY 46
           +++  ++I   M   I P                +I+E N+     ++D NT  ++ ++ 
Sbjct: 2   IKRIALVIFTVMCFLIMPVSHAEDIMDITRQAGYTISEVNRPKASIVVDANTSDILWQDN 61

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTM 102
            D P +PAS++K+ T YV+F  L + K  + T +T ++           SN+    G   
Sbjct: 62  IDIPRDPASMSKMFTLYVLFEELAKGKITMDTTVTATETDQAIAKIYEISNNNIVAGVAY 121

Query: 103 TLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G    
Sbjct: 122 PIRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKKLGMTNTHFSNASGAAAQ 181

Query: 162 ---------------GHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGKKYP 201
                           + TTARD+A L +     +PQ + +               +++ 
Sbjct: 182 AFQGYYNPTKYDLSAANITTARDLAKLLYAFLKKYPQIIDFTNQSVVHTMVGTPYEEEFH 241

Query: 202 NTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------ 251
             N           G DG+KTG + ++ FN + +A +G+  LI +++G  D +       
Sbjct: 242 TYNHSLPNNQFGMEGVDGLKTGSSPSAAFNAMVTAKRGNTRLITIVMGVGDWSDQNGEFY 301

Query: 252 RNKVSASLLSMGF-YNKTDRKKINYIIKDFYQQNLSNEVPN 291
           R+    +L   GF  +K+  K     ++    Q     +P 
Sbjct: 302 RHPFVNALTEKGFSDSKSLTKAARKKLEKLVPQKKKENLPK 342


>gi|291459228|ref|ZP_06598618.1| serine-type D-Ala-D-Ala carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418482|gb|EFE92201.1| serine-type D-Ala-D-Ala carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 334

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 27/261 (10%)

Query: 22  IAETNKLPYYTLLDTNTGH---VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            AE    P + L D +T      +A   P      AS+TK+MTA V    ++     L  
Sbjct: 74  NAEELSSPAFLLADYSTKEKPEPLAYRNPYARTYQASITKVMTALVCLETVQ----DLNQ 129

Query: 79  PITISKNASEYPPSNSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
             T+++ +      +S+   K G  + +++ L  +++ S ND AVA+AE+   + + FV+
Sbjct: 130 EFTVTQRSMIRDEGSSSALLKVGDRLRIEDLLYGMLLPSGNDAAVAVAEASAGSVEAFVK 189

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN T+  LGL+ THF+N +G+    HYTTA D+ +L       + ++          + 
Sbjct: 190 KMNETALRLGLTGTHFVNPNGLPSDDHYTTAYDIYLLLA-EAMKYEEFRKIVGSTSYTVN 248

Query: 197 GKKYPNTNWAVGT---------------FLGADGMKTGFTCASGFNIVASAIQ--GDQSL 239
            +   N                       L   G KTG T  +G+ +     +    +  
Sbjct: 249 YRDKNNVPKTQIWKGSNQFMTGERETPEDLKVLGGKTGTTKKAGYCLTMDTERISTQKEY 308

Query: 240 IAVILGALDRNTRNKVSASLL 260
           I+V++    ++        LL
Sbjct: 309 ISVVMKDDSKDELYSDMTKLL 329


>gi|161520620|ref|YP_001584047.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           multivorans ATCC 17616]
 gi|189353194|ref|YP_001948821.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans ATCC
           17616]
 gi|160344670|gb|ABX17755.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           multivorans ATCC 17616]
 gi|189337216|dbj|BAG46285.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia multivorans ATCC
           17616]
          Length = 364

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 108 LLASCGYNPRAVRSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 167

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L        +      + S  + GS ++  +   + ++ S N  A A++       
Sbjct: 168 LNGVLRVTA---NDRDTIKFTGSRLQVGSELSRRDMFHIALMSSENRAAAALSRDYPGGR 224

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----HY 187
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 225 AAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVDAAAQDPLIRYFSTDRS 283

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 284 TTVRPGDGELLYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRTTVVLLGAP 343

Query: 248 DRNTRNKVSASLLSM 262
            R   +  + ++   
Sbjct: 344 TRAGVSSDAITIHRW 358


>gi|89899952|ref|YP_522423.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Rhodoferax
           ferrireducens T118]
 gi|89344689|gb|ABD68892.1| murein-DD-endopeptidase. Serine peptidase. MEROPS family S11
           [Rhodoferax ferrireducens T118]
          Length = 282

 Score = 99.3 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 17/265 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++   V +A+   ++              +  +++  +G ++ E         ASLTKLM
Sbjct: 2   LKHLFVCLAICSAASASAMS-----FGSQHAIVVNNESGEILFEENASSVVPIASLTKLM 56

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS---TFKKGSTMTLDNALKLLIVKSAN 117
           TA VV                IS   ++             G+T+     L+L ++ S N
Sbjct: 57  TAMVVLDS------KPDMEEKISIQLADVDMFKHSASHVPLGTTLPRREVLQLALMSSDN 110

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
             A ++A +       FV+ ++   K+LG+  T      G+      T A    +     
Sbjct: 111 RAAASLARTYPGGNPAFVKAVHEKIKSLGMINTVIKEPTGLSPENASTAADLAKMAFAAS 170

Query: 178 KTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQ 234
           +      +   +     ++ +  ++ NTN  VG         KTGFT  +G  ++     
Sbjct: 171 RYPVIVNITTDRSDLINMQGRSVEFHNTNRLVGKRGWDILLSKTGFTNEAGHCLIMRIKL 230

Query: 235 GDQSLIAVILGALDRNTRNKVSASL 259
             ++   V+L A   ++    + ++
Sbjct: 231 AGKNTTLVLLNAKASSSTFFDALNI 255


>gi|227509182|ref|ZP_03939231.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227525051|ref|ZP_03955100.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus hilgardii ATCC
           8290]
 gi|227087763|gb|EEI23075.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus hilgardii ATCC
           8290]
 gi|227191328|gb|EEI71395.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 408

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 32/268 (11%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                 LD NT  V+     + P   AS++KLMT Y+V   +       T+ +  S    
Sbjct: 141 AKGAVALDVNTNGVVWSKNANTPRPIASVSKLMTLYLVQQKISNGGGTWTSKVNTSNAGL 200

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLI----VKSANDIAVAIAES-----LCKTEKKFVQHM 138
           +    +STF           ++ L     ++S+N+ A+A+ +           KKF+  M
Sbjct: 201 KKLGKDSTFGGFKFTKNSYTVRDLYLAALIESSNNAAIALGQWVAGGSTPTYNKKFISMM 260

Query: 139 NNTSKNLGLSATHFMNAHGVV-------------QHGHYTTARDMAILSWRIKTDFPQYM 185
           N  +K+  LS T F++A G+               + +  +A D+A ++  + TD+   +
Sbjct: 261 NAQAKSWNLSNTSFVSASGMEQNSLKPFGYSIGGANANMVSAADVAQIARHLITDYNDVL 320

Query: 186 HYFQIKGLEIKGKKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-S 238
               I  + + G+K  N N            L  DG+KTG+T  +G+  V +  +     
Sbjct: 321 KDASIGSMSLDGQKLYNYNNLLPGRKYYQKSLNVDGLKTGYTDPAGYCFVGTGRKSGHDR 380

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYN 266
           +I V+L   +       + SL++  +  
Sbjct: 381 IITVVLHDENE---FTETRSLMNYVYNK 405


>gi|260495307|ref|ZP_05815434.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp. 3_1_33]
 gi|260197085|gb|EEW94605.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp. 3_1_33]
          Length = 418

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L   + ISK   +
Sbjct: 164 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLNDSVRISKTPLK 222

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE +   +   FV  MN   + LGL
Sbjct: 223 YGGSGIALKAGQMFILEDLIKAAAVYSANNATYAIAEYVGNGSIFGFVTKMNKKLRELGL 282

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +       
Sbjct: 283 QNEIKYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKTTKIHNDKISI 342

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++      +I V+LG     TR+ +  ++L
Sbjct: 343 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFEGTDVIIVVLGGETYKTRDNLVRNIL 401

Query: 261 SMGFYNKTDR 270
           ++   N T +
Sbjct: 402 NILSENYTVK 411


>gi|227512066|ref|ZP_03942115.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus buchneri ATCC
           11577]
 gi|227084718|gb|EEI20030.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus buchneri ATCC
           11577]
          Length = 408

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 32/268 (11%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                 LD NT  V+     + P   AS++KLMT Y+V   +       T+ +  S    
Sbjct: 141 AKGAVALDVNTNGVVWSKNANTPRPIASVSKLMTLYLVQQKISNGGGTWTSKVNTSNAGL 200

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLI----VKSANDIAVAIAES-----LCKTEKKFVQHM 138
           +    +STF           ++ L     ++S+N+ A+A+ +           KKF+  M
Sbjct: 201 KKLGKDSTFGGFKFTKNSYTVRDLYLAALIESSNNAAIALGQWVAGGSTPTYNKKFISMM 260

Query: 139 NNTSKNLGLSATHFMNAHGVV-------------QHGHYTTARDMAILSWRIKTDFPQYM 185
           N  +K+  LS T F++A G+               + +  +A D+A ++  + TD+   +
Sbjct: 261 NAQAKSWNLSNTSFVSASGMEQNSLKPFGYSIGGANANMVSAADVAQIARHLITDYNDVL 320

Query: 186 HYFQIKGLEIKGKKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-S 238
               I  + + G+K  N N            L  DG+KTG+T  +G+  V +  +     
Sbjct: 321 KDASIGSMSLDGQKLYNYNNLLLGRKYYQKSLNVDGLKTGYTDPAGYCFVGTGRKSGHDR 380

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYN 266
           +I V+L   +       + SL++  +  
Sbjct: 381 IITVVLHDENE---FTETRSLMNYVYNK 405


>gi|323694553|ref|ZP_08108719.1| hypothetical protein HMPREF9475_03583 [Clostridium symbiosum
           WAL-14673]
 gi|323501321|gb|EGB17217.1| hypothetical protein HMPREF9475_03583 [Clostridium symbiosum
           WAL-14673]
          Length = 353

 Score = 98.9 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 25/222 (11%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           MTA +V          L   +T S+N     E        K G   ++ + +  L++KSA
Sbjct: 1   MTALLVLERS-----SLDDTVTFSENAVTNLEAGAVTLKIKAGDKFSVKDCMYALLLKSA 55

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           N++A  +AE +  +   F   MN  + +LG + THF+N +G+    HYTTARDMA+++  
Sbjct: 56  NEVANGLAEHVAGSVSGFADLMNQKAASLGCTNTHFVNPNGLNDSNHYTTARDMALIAKA 115

Query: 177 IK-------------TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
                           DFP       ++ L +  K     N     + G  G KTG+T  
Sbjct: 116 AFENQTLSQIASTVSYDFPATASVPTVRKLTMGHKMVNPAN--GEYYQGIVGGKTGYTSL 173

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
           +G  +V  A +  + LIAV+L    + T    + +LL  GF 
Sbjct: 174 AGNTLVTCAERDGKRLIAVVL--KSKQTHYTDTKALLDYGFA 213


>gi|296328746|ref|ZP_06871260.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296154081|gb|EFG94885.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 423

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 9/248 (3%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
             ++    G+VI     D  +  AS+TK+M+  V F  +   K  L   + ISKN  +Y 
Sbjct: 170 AVVVGDTKGNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGKISLNDSVRISKNPLKYG 229

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSA 149
            S    K G    L++ +K   V SAN+   AIAE +   +   FV  MN   K  GL  
Sbjct: 230 GSGIPLKAGQMFVLEDLIKASAVYSANNATYAIAEYVGNGSVFSFVAKMNKKLKEYGLQN 289

Query: 150 -THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKYPN 202
              +    G+          +         +        +      +   +        N
Sbjct: 290 EIKYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKSTKIHNGKISIRN 349

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +G   G  G+KTGF   + +NI  ++      +I V++G     TR+ +  S+L +
Sbjct: 350 RNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFEGIDVIIVVMGGETYKTRDGIVLSVLDI 408

Query: 263 GFYNKTDR 270
              N T +
Sbjct: 409 LNSNYTIK 416


>gi|317056264|ref|YP_004104731.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
 gi|315448533|gb|ADU22097.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ruminococcus
           albus 7]
          Length = 407

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 67/316 (21%), Positives = 123/316 (38%), Gaps = 22/316 (6%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   LLD ++  ++A    D    PASLTKLMT  V    + + +A          
Sbjct: 91  DITCQTGILLDCDSNEILAGLKYDQRIYPASLTKLMTLLVAVENIDDMQAKYKFTKKDLA 150

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             ++   S + F  G  +T+++ L   I+ S  D  + +A ++   EK FV+ MN+   +
Sbjct: 151 PLTKENASCAGFVAGDEVTMEDLLYAAILPSGADGTLGLANAIAGNEKNFVKLMNDKVAD 210

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP--- 201
           LGL+ T+F NA G+    HYTTA+DMA+++     +          K      K+Y    
Sbjct: 211 LGLANTNFANASGLHHKQHYTTAQDMAVITKACMENETCRKVLCTEKWTTKPAKEYKEGI 270

Query: 202 ----NTNWAVGTF------LGAD-----GMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                 +   G +       GA+     G KTGFT  +G+ +        +  IA+   +
Sbjct: 271 ELESIFHSRFGGYFVDADQDGAEDAKLLGGKTGFTDEAGYTLATVVEFKGKEYIAITTKS 330

Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
                  + +     + F N           +   Q   S++      +    + +    
Sbjct: 331 DTYLASVEDAI----LVFENYLPGAAGTPDDRKEKQDEDSSDESEEENDTTFIEIKEKAD 386

Query: 307 NTQMKEAKDKESHFID 322
           +++  + ++  +   D
Sbjct: 387 SSKSDDDEESSAVVPD 402


>gi|107026153|ref|YP_623664.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia AU 1054]
 gi|116692663|ref|YP_838196.1| peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia HI2424]
 gi|170738088|ref|YP_001779348.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia MC0-3]
 gi|105895527|gb|ABF78691.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia cenocepacia AU 1054]
 gi|116650663|gb|ABK11303.1| murein-DD-endopeptidase, Serine peptidase, MEROPS family S11
           [Burkholderia cenocepacia HI2424]
 gi|169820276|gb|ACA94858.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Burkholderia
           cenocepacia MC0-3]
          Length = 360

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 91/255 (35%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 104 LLASCGYTPRAVGSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARDADRP 163

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L       ++      + S  + GS ++      + ++ S N  A A++       
Sbjct: 164 LNGVLRVTA---RDRDTIKFTGSRLQVGSELSRREMFHIALMSSENRAAAALSRDYPGGR 220

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH----Y 187
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 221 AAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDLS 279

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 280 TTVRPGDGELVYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRETVVLLGAA 339

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 340 TRAGVSSDAIKIHRW 354


>gi|254254175|ref|ZP_04947492.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia dolosa AUO158]
 gi|124898820|gb|EAY70663.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia dolosa AUO158]
          Length = 341

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V     + 
Sbjct: 85  LLASCGYSPRAVRSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARRADRP 144

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGS-TMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               L   + ++    +      +       ++      + ++ S N  A A++      
Sbjct: 145 ----LNGVLRVTARDRDTIKFTGSRLPIGAELSRRQMFHIALMSSENRAAAALSRDYPGG 200

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              FV  MN  ++ LG+  THF    G+  H   T      ++    K    +Y      
Sbjct: 201 RAAFVGAMNREARRLGMRRTHFREPTGLSPHNVSTADDLARLVGAAAKDPLIRYFSTDTS 260

Query: 191 KGLEIKGKKYPNTNWAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             +     +    N       G       KTGF   SG  +V       +    V+LGA 
Sbjct: 261 TTVRAGDDELLYVNSDPLVRYGRLPIRLQKTGFINESGHGVVMRMRVNGRRETIVLLGAP 320

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 321 TRAGVSSDALKIHRW 335


>gi|149196127|ref|ZP_01873183.1| D-alanyl-D-alanine carboxypeptidase [Lentisphaera araneosa
           HTCC2155]
 gi|149140974|gb|EDM29371.1| D-alanyl-D-alanine carboxypeptidase [Lentisphaera araneosa
           HTCC2155]
          Length = 337

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 15/255 (5%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM--LTTPI 80
             T  +    + + N G  +     +     ASLTK +T   V + +K+      L   +
Sbjct: 80  PSTRNVRAGLVFEMNQGKTLWSTNANKSVPVASLTKCLTVLTVLNHIKKNPEYSLLDQVL 139

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMN 139
               +      S        T++++  L   +VKSAND    IAE   K + K F+  MN
Sbjct: 140 ISKSSMKTSSSSFLRKYPKDTISIEELLISAMVKSANDSCQLIAEHFGKGDPKVFIAMMN 199

Query: 140 NTSKNLGLSATHFMNAHGVV------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG- 192
             ++ LG++ T   NAHG+       +  ++++  D+  L  +   D+P  + +   +  
Sbjct: 200 KQAQELGMTQTRMSNAHGLPFNREKPELDNHSSMSDLLHLVRKSINDYPIILKWTSKREA 259

Query: 193 ----LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                  K  K  NTN  +    G +G KTGFT  +G+  + +     +    VI G  +
Sbjct: 260 LLPVNSHKATKIGNTNPLLAV-KGVNGYKTGFTINAGWCQILTTRSNGKFYFLVITGCPN 318

Query: 249 RNTRNKVSASLLSMG 263
           +NTR+    +L++  
Sbjct: 319 KNTRDVTMRALMNWA 333


>gi|319744056|gb|EFV96433.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus agalactiae
           ATCC 13813]
          Length = 395

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 134/333 (40%), Gaps = 54/333 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M + +V     +LS        AE                   NK     ++D N GH++
Sbjct: 1   MPKLIVSFLCILLSVTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHIL 59

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKK 98
            E+  D   +PAS++K+ T Y++F  L + K  L T +T ++           SN+    
Sbjct: 60  WEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISNNNIHA 119

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G    +   + +  V S+N   + IA          F++ +N T+K LG++ THF N  G
Sbjct: 120 GVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLGMTKTHFYNPSG 179

Query: 158 ---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
                               + TTARD++IL++     +P  ++Y +   ++        
Sbjct: 180 AVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYE 239

Query: 203 TNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-- 251
             +    +          G DG+KTG + ++ FN + +A + +  LI V+LG  D +   
Sbjct: 240 ETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVVLGVGDWSDQD 299

Query: 252 ----RNKVSASLLSMGFYNKTDRKKINYIIKDF 280
               R+    +L+  GF +  +      ++K  
Sbjct: 300 GEYYRHPFVNALVEKGFKDAKNISSKTPVLKAV 332


>gi|163814077|ref|ZP_02205469.1| hypothetical protein COPEUT_00230 [Coprococcus eutactus ATCC 27759]
 gi|158450526|gb|EDP27521.1| hypothetical protein COPEUT_00230 [Coprococcus eutactus ATCC 27759]
          Length = 331

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 92/250 (36%), Gaps = 18/250 (7%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              LLD  T   +  +       PAS+TK+MT  +V   +++ +  L   +T+++  +  
Sbjct: 79  AAMLLDNTTREPVIAHNAHKKIYPASMTKIMTGLLVIESIEKGEISLDDMVTLNRKVTFD 138

Query: 90  PPSNSTFKKG--STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                         + + N L  L++ S ND  V +AE +  +E  F   MN  ++ +G 
Sbjct: 139 DWDAMASDLVGGCRINVKNLLYGLMITSYNDCGVILAELIAGSESAFCDMMNEKAQEIGA 198

Query: 148 SATHFMNAHGVVQHGHYTTARDMA-ILSWRIKTDFPQYMHYFQIKGLEI----------- 195
           + THF N HG+    HYTTA D+  IL    K D    +                     
Sbjct: 199 TNTHFENCHGLHSDDHYTTAYDLYLILDEFSKHDLAYMIDSLSTYDFTYTDADGNEQVVT 258

Query: 196 --KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG--DQSLIAVILGALDRNT 251
                +Y      +         KTG T  +   ++            +A+I GA  +  
Sbjct: 259 IEPTNEYLTGEVNLPDGYSIGSWKTGTTEEALNCLIMELKNDSTGHEYVAIIAGADGKEA 318

Query: 252 RNKVSASLLS 261
                  +++
Sbjct: 319 LYSGMTEMIN 328


>gi|65318836|ref|ZP_00391795.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
          Length = 293

 Score = 98.9 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 11/211 (5%)

Query: 1   MRQFLVIIAMAML-SNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           MR+  VII + ++ +++ P  + A            L++ ++G V+       P   AS+
Sbjct: 56  MRRICVIITLLIIYASVMPIPTYAKMNSNVSARNAVLMEQHSGRVLYGKAEHEPQKIASI 115

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK+MTA +     K K       + +S  A     S    K G  + L++ +  L+++S 
Sbjct: 116 TKIMTALLAAESGKMK-----ERVLVSNEAVRVEGSAIYLKPGQKVKLEDLVYGLMLRSG 170

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSW 175
           ND A  IAE++  + + FV  MN  +K + +  THF N HG+     HY++A DMA+L+ 
Sbjct: 171 NDAAQVIAENVGGSIEGFVYLMNEKAKQIRMKDTHFSNPHGLDGDGSHYSSAYDMALLTR 230

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
               +   +   F  K  +     YP  N  
Sbjct: 231 YAMGN-ETFKEIFGTKTYKSDSWDYPWKNKH 260


>gi|19703412|ref|NP_602974.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19713482|gb|AAL94273.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 368

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 9/248 (3%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
             ++    G+VI     D  +  AS+TK+M+  V F  +   K  L   + ISKN  +Y 
Sbjct: 115 AVVVGDTKGNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGKISLNDSVRISKNPLKYG 174

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGLSA 149
            S    K G    L++ +K   V SAN+   AIAE +   +   FV  MN   K  GL  
Sbjct: 175 GSGIPLKAGQMFVLEDLIKASAVYSANNATYAIAEYVGNGSVFSFVAKMNKKLKEYGLQN 234

Query: 150 -THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKYPN 202
              +    G+          +         +        +      +   +        N
Sbjct: 235 EIKYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKSTKIHNGKISIRN 294

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +G   G  G+KTGF   + +NI  ++      +I V++G     TR+ +  S+L +
Sbjct: 295 RNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFEGTDVIIVVMGGETYKTRDGIVLSVLDI 353

Query: 263 GFYNKTDR 270
              N T +
Sbjct: 354 LNSNYTIK 361


>gi|256846732|ref|ZP_05552188.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp.
           3_1_36A2]
 gi|256717952|gb|EEU31509.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp.
           3_1_36A2]
          Length = 425

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L   + ISKN  +
Sbjct: 171 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLNDSVRISKNPLK 229

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE + K +   FV  MN   K LGL
Sbjct: 230 YGGSGIALKAGQMFVLEDLIKASAVYSANNATYAIAEYVGKGSVFSFVTKMNRKLKELGL 289

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +       
Sbjct: 290 QNEIRYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKSTKIHNGKISI 349

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++   D  +I V++G     TR+K+  S+L
Sbjct: 350 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFQDTDVIIVVMGGETYKTRDKIVLSVL 408

Query: 261 SMGFYNKTDR 270
            +   N T +
Sbjct: 409 DILNNNYTVK 418


>gi|295398159|ref|ZP_06808208.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
 gi|294973678|gb|EFG49456.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
          Length = 469

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 104/289 (35%), Gaps = 30/289 (10%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++      +    ++D+ +G ++ +         ASLTKL+  +VV+  +        + 
Sbjct: 56  IATNYELNIDAAMVIDSESGQILYDQNGADLHGIASLTKLIALFVVYDEIAAGNLSFDSK 115

Query: 80  ITISKNASEYP-----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           + +S+  SE        +    +     T+D  +   ++ S N   VA+AE +  +E+ F
Sbjct: 116 VPVSEAVSELSVAAGLSNVPLEESTDYYTVDALIDAAVIGSGNAAVVALAEYIAGSEQSF 175

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVV----------------QHGHYTTARDMAILSWRIK 178
           V+ M++    LG+       A G+                    +   ARD+  ++  I 
Sbjct: 176 VEMMDDKLTELGIKDFELYTASGLAGSWLTTTDGSASPYSIDQENMMQARDILFVAREIV 235

Query: 179 TDFPQYMHYFQIKGLEIKGKKY-------PNTNWAVGTF--LGADGMKTGFTCASGFNIV 229
            ++P  +    +   E +            N       +      G+KTG    +G  I+
Sbjct: 236 NEYPDVLERSNVTSKEFQVSDTETYTLESTNLFLPGNAYERDDVSGLKTGTESIAGRCII 295

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
             +    + ++ V LGA   + R   + +LL+    N            
Sbjct: 296 IMSQIDGRDIMLVTLGAETEDERYVNTGTLLTALQENLAYTTLYEEGAP 344


>gi|89893842|ref|YP_517329.1| hypothetical protein DSY1096 [Desulfitobacterium hafniense Y51]
 gi|219668209|ref|YP_002458644.1| serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
 gi|89333290|dbj|BAE82885.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538469|gb|ACL20208.1| Serine-type D-Ala-D-Ala carboxypeptidase [Desulfitobacterium
           hafniense DCB-2]
          Length = 324

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 11/237 (4%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+      ++     +    PASLTK+MTA +    L   +  +       + 
Sbjct: 69  LNSSQAILVRLKDQKILMGKGSEEKIYPASLTKIMTAILAIENLPNLQEKIRLSQATFQG 128

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             +   S + F+    +++ + L  +++ S  +  V +AE +  +E+KF   MN  +  L
Sbjct: 129 LYQANASMTGFQPEEQVSVMDLLYGVMLPSGAESCVGLAERIAGSERKFALLMNQKAAEL 188

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
           G++ THF NA G+    HYTT +D+A+L      +      +   +       K+P    
Sbjct: 189 GMNHTHFENATGLHAENHYTTVKDLAVLLSYALQNDLFREVFTASRHSTPPTNKHPGGIT 248

Query: 206 AVGTFLGADGM-----------KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
              T     G            KTG+T  +G  + + A  G +  I +  GA   + 
Sbjct: 249 FYSTMFSVLGSSKIAGGEILGGKTGYTDEAGLCLASLAQVGKEQYILITAGAKGNHD 305


>gi|118161406|gb|ABK64087.1| putative carboxypeptidase [Janthinobacterium lividum]
          Length = 583

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 83/242 (34%), Gaps = 10/242 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                +  + D  +G V+     D     AS+TKLMTA VV              + I +
Sbjct: 337 PVSAKHMLVFDDASGKVLMAKDADAVVPIASITKLMTAMVVLDAG----LDPDEQLRIVR 392

Query: 85  NASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
              +      +       ++    L+L ++ S N  A A+A +       F Q +    +
Sbjct: 393 ADGDSSLQRHSLLADGVAVSRGALLQLALLPSENRAAAALARTYPGGNAAFAQALQAKIR 452

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGKKY 200
           +LGLS T      G     + +TA ++A +                 +       K +  
Sbjct: 453 HLGLSRTTLTEPVG-SSPANTSTAIEVAKIVAAAARYPDIARITSHPQASVAVNGKTRTL 511

Query: 201 PNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
            NTN  VG         KTG +  +G  +      G + +  V+L A     R+  +  +
Sbjct: 512 HNTNPLVGGKGWDILLSKTGSSNEAGSCLTMRMRSGGKHVTVVLLDADGAQRRSLDAGHI 571

Query: 260 LS 261
             
Sbjct: 572 RD 573


>gi|22536331|ref|NP_687182.1| penicillin-binding protein 4 [Streptococcus agalactiae 2603V/R]
 gi|76787492|ref|YP_328877.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae A909]
 gi|77405132|ref|ZP_00782231.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae H36B]
 gi|22533155|gb|AAM99054.1|AE014198_2 penicillin-binding protein 4, putative [Streptococcus agalactiae
           2603V/R]
 gi|76562549|gb|ABA45133.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae A909]
 gi|77176275|gb|EAO79045.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae H36B]
          Length = 395

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 134/333 (40%), Gaps = 54/333 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M + +V     +LS        AE                   NK     ++D N GH++
Sbjct: 1   MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHIL 59

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKK 98
            E+  D   +PAS++K+ T Y++F  L + K  L T +T ++           SN+    
Sbjct: 60  WEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISNNNIHA 119

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G    +   + +  V S+N   + IA          F++ +N T+K LG++ THF N  G
Sbjct: 120 GVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLGMTKTHFYNPSG 179

Query: 158 ---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
                               + TTARD++IL++     +P  ++Y +   ++        
Sbjct: 180 AVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYE 239

Query: 203 TNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-- 251
             +    +          G DG+KTG + ++ FN + +A + +  LI V+LG  D +   
Sbjct: 240 ETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVVLGVGDWSDQD 299

Query: 252 ----RNKVSASLLSMGFYNKTDRKKINYIIKDF 280
               R+    +L+  GF +  +      ++K  
Sbjct: 300 GEYYRHPFVNALVEKGFKDAKNISSKTPVLKAV 332


>gi|145504310|ref|XP_001438127.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405288|emb|CAK70730.1| unnamed protein product [Paramecium tetraurelia]
          Length = 319

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 33/277 (11%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI- 80
                    + ++ T  G  +    P      ASLTK+MTAY      ++          
Sbjct: 19  NPPQTTALSWCIV-TQIGDELVSKSPSLKLEVASLTKIMTAYTAIQLCEDLNLDYNEINI 77

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC------------ 128
            I + A++   +++  ++   ++L   L  L++ S ND A++IA                
Sbjct: 78  RIPRIATQIGGTSAFLRRDDILSLVELLYALMLPSGNDAAISIALHFGSILNTQRKQKIA 137

Query: 129 -----------------KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
                                +FV+ MN  +  LG+  + F N HG+    + +TA DM 
Sbjct: 138 SYITCDTIQGFYDDTQMSNMNRFVRQMNENAMKLGMRDSQFSNPHGLSSKANKSTASDMC 197

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            +S       P        K    +  ++ NTN  +  F   +G+KTG T  +G  +  S
Sbjct: 198 RMSSAYL-KIPVLKQICNSKSFSCRNYEWFNTN-QLLHFENYNGIKTGITPNAGACLAVS 255

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                 S+I V++GA D+  R + +  L++      +
Sbjct: 256 YESVLGSIIVVLIGAKDQKRRFEETDKLINWVSREYS 292


>gi|77409047|ref|ZP_00785765.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae COH1]
 gi|77172341|gb|EAO75492.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae COH1]
          Length = 395

 Score = 98.5 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 134/333 (40%), Gaps = 54/333 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M + +V     +LS        AE                   NK     ++D N GH++
Sbjct: 1   MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHIL 59

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKK 98
            E+  D   +PAS++K+ T Y++F  L + K  L T +T ++           SN+    
Sbjct: 60  WEDNADLERDPASMSKMFTLYLLFEDLAKGKTNLNTTVTATETDQAISKIYEISNNNIHA 119

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G    +   + +  V S+N   + IA          F++ +N T+K LG++ THF N  G
Sbjct: 120 GVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLGMTKTHFYNPSG 179

Query: 158 ---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
                               + TTARD++IL++     +P  ++Y +   ++        
Sbjct: 180 AVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYE 239

Query: 203 TNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-- 251
             +    +          G DG+KTG + ++ FN + +A + +  LI V+LG  D +   
Sbjct: 240 ETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVVLGVGDWSDQD 299

Query: 252 ----RNKVSASLLSMGFYNKTDRKKINYIIKDF 280
               R+    +L+  GF +  +      ++K  
Sbjct: 300 GEYYRHPFVNALVEKGFKDAKNISSKTPVLKAV 332


>gi|218680596|ref|ZP_03528493.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli CIAT 894]
          Length = 246

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 2/190 (1%)

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
           ++  T++ FV  MN  +  LG++ +HF+N +G+   G YTTARD+A+L+  ++ DFPQY 
Sbjct: 1   AIGGTQEGFVTRMNGEALKLGMTDSHFVNPNGLPGKGQYTTARDLAVLTVALRRDFPQYA 60

Query: 186 HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
            YF ++G     +  P+ N  +G F GADGMKTGF CASGFN + SA +  ++L++V+LG
Sbjct: 61  GYFALEGFTNGQQNVPSLNMLIGRFAGADGMKTGFICASGFNQIGSATRNGRTLVSVVLG 120

Query: 246 ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
                 R   +A+LL  GF  +    +    ++ +       +V +IS ++C+ +   I 
Sbjct: 121 TDSLAARADATANLLQKGFTTQFPGSETLGSLRPYGPGQD--QVADISADICSAKGAKIR 178

Query: 306 YNTQMKEAKD 315
             T+ +  + 
Sbjct: 179 SETRDEVGRM 188


>gi|294784444|ref|ZP_06749735.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp. 3_1_27]
 gi|294488016|gb|EFG35371.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium sp. 3_1_27]
          Length = 425

 Score = 98.1 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 100/250 (40%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L   + ISKN  +
Sbjct: 171 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLNDSVRISKNPLK 229

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-TEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE + K +   FV  MN   K LGL
Sbjct: 230 YGGSGIALKVGQMFVLEDLIKASAVYSANNATYAIAEYVGKGSVFSFVTKMNRKLKELGL 289

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +       
Sbjct: 290 QNEIRYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKSTKIHNGKISI 349

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++   D  +I V++G     TR+K+  S+L
Sbjct: 350 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFQDTDVIIVVMGGETYKTRDKIVLSVL 408

Query: 261 SMGFYNKTDR 270
            +   N T +
Sbjct: 409 DILNNNYTVK 418


>gi|54309061|ref|YP_130081.1| D-alanyl-D-alanine endopeptidase [Photobacterium profundum SS9]
 gi|46913493|emb|CAG20279.1| Hypothetical D-alanyl-D-alanine endopeptidase [Photobacterium
           profundum SS9]
          Length = 316

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 94/274 (34%), Gaps = 17/274 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R  L I ++  +       +                  + D  +G  + +   +     A
Sbjct: 21  RALLFIFSLVSVGIATSAHATTAKLDPNNIQTASVSTYVTDLKSGKTLYKKNQNVVMPLA 80

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           S+TKLMTA V        K  L   IT    +        +  +  S ++    + + ++
Sbjct: 81  SITKLMTAMVTLDA----KLPLDEKITFKPIDKKRMYNGYTRIRMESRLSRGETIHIALM 136

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S N  A A+A S       F++ MN  +K LG++ T F+++ G+      T +    + 
Sbjct: 137 SSENLAAAALAGSYPGGYDAFIKAMNAKAKALGMTNTRFVDSSGLDPKNVSTASDINKMA 196

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCASGFNI 228
               K    +      +  +     K    Y NTN          +  KTG+   +G  +
Sbjct: 197 KAAYKYTKIREYSTTPVHTVYFTKPKYKLGYTNTNVLARGKKWDVEMTKTGYLDIAGHCL 256

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                   + ++ V+L A  + T    +  +   
Sbjct: 257 TMITKINGKEILMVMLDAQGKLTPIGDAGRIKKW 290


>gi|313616428|gb|EFR89354.1| serine-type D-Ala-D-Ala carboxypeptidase [Listeria innocua FSL
           S4-378]
          Length = 220

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 6/216 (2%)

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTKLMTA++V   +  KK      + + +       S     +  T ++ +    ++V
Sbjct: 5   ASLTKLMTAFLVLEAVDNKKLSWDEELDLIRLDDPSAVSLYAITQKRTWSVRDLYSAMLV 64

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA-THFMNAHGVVQHGHY--TTARDM 170
            SAND A  +       +  F Q MNN +K LGLS+ T F++A G+   G    +T +D+
Sbjct: 65  MSANDAAETLG--NRLDDANFPQKMNNEAKKLGLSSKTKFVSASGLDVDGKMAVSTTKDL 122

Query: 171 AILSWRIKTDFPQYMHYFQIK-GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
            +LS ++ +  P+ +        +  +G    +TN ++G+  G DG+KTGFT  +G+  +
Sbjct: 123 FLLSSKLISTHPEVLETTSKSSIITEEGATLESTNDSIGSIQGLDGLKTGFTDEAGYCFI 182

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            +A +  + +I+++L A     R K +  L+ +GF 
Sbjct: 183 GTAKRDGKRVISIVLDADTAKKRFKDTEKLMGIGFK 218


>gi|253577898|ref|ZP_04855170.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850216|gb|EES78174.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 356

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 22/246 (8%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP- 90
            L   +   V+  N       PAS+TK+MTA +     K     L   +TI+++      
Sbjct: 111 LLFSLSNHKVLYANGIYDKVYPASITKIMTAMLALQSGK-----LNDTVTITQDNVTLED 165

Query: 91  -PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                 F  G  +TLD  L  L+V S ND A AIAE +  + + FVQ MN+ +  LG + 
Sbjct: 166 GSQVCGFVAGDQVTLDQLLHCLLVYSGNDAASAIAEYVGGSTENFVQMMNDYAAKLGCTG 225

Query: 150 THFMNAHGVVQHGHYTTARDMAILSW--RIKTDFPQYMHYFQIKGLEIK----------- 196
           THF N HG+    HYTT  D+ ++        +F +                        
Sbjct: 226 THFSNPHGLQDENHYTTPYDIYLMLNEAFTYPEFTEITELPSYTVTYTGSDGTEKSTTLT 285

Query: 197 -GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALDRNTRNK 254
               Y          +   G KTG T  +G  +         ++ +++++GA  +    +
Sbjct: 286 ATDHYLTGEATAPKDVTILGGKTGTTEVAGNCLAILTQNAYGKTFVSIVMGAATKELLYQ 345

Query: 255 VSASLL 260
              SLL
Sbjct: 346 EMNSLL 351


>gi|300313783|ref|YP_003777875.1| D-alanyl-D-alanine carboxypeptidase [Herbaspirillum seropedicae
           SmR1]
 gi|300076568|gb|ADJ65967.1| D-alanyl-D-alanine carboxypeptidase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 385

 Score = 98.1 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 8/242 (3%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +LD  TG  + E   D     AS+TKLMTA V     +     +   + ++++
Sbjct: 141 IFSRGVYVLDEQTGTPLFERNADTVAPIASVTKLMTAIVWLDQKQ---LAMGNRLEVTED 197

Query: 86  ASEYPPSNSTF-KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +      +    G++++  + L + ++ S N  A A++         F+  MN  ++ 
Sbjct: 198 DLDTLKFTHSRLGVGASLSRADMLHIALMSSENRAAAALSRDYPGGRPAFIAAMNARAQA 257

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           LG+S THF NA G+      T     A++    +    +     + K + I   +    N
Sbjct: 258 LGMSHTHFENATGLSPENVSTPRELAALVQAANRYQLIRNDSLDKQKMINIGRGQLQYIN 317

Query: 205 WAVGTFLG---ADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLL 260
                  G   A   KTGF   SG N+V   +  D+  +I  +LG+   +        + 
Sbjct: 318 SNRLIRYGQVNASVQKTGFINESGHNMVLRMLVHDRRPVIVTMLGSGSADGSRLDGVRIA 377

Query: 261 SM 262
             
Sbjct: 378 KW 379


>gi|302670839|ref|YP_003830799.1| D-alanyl-D-alanine carboxypeptidase DacA2 [Butyrivibrio
           proteoclasticus B316]
 gi|302395312|gb|ADL34217.1| D-alanyl-D-alanine carboxypeptidase DacA2 [Butyrivibrio
           proteoclasticus B316]
          Length = 329

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 100/251 (39%), Gaps = 18/251 (7%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L D      +     +    PASLTK+MTAYV     K               
Sbjct: 78  TDSVSAGLFDLTNRETLFAQNVNDRVMPASLTKVMTAYVAL---KYGSLEQVLVAGSDVY 134

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
            +E        K+G  MTLD AL +L++ SAND+A  IA ++  + ++FV  MN  +  +
Sbjct: 135 VNESGAQKIGLKEGDRMTLDQALHILLIYSANDVANLIASNISGSIEEFVNTMNAEAYAI 194

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMA--------ILSWRIKTDFPQYMHYFQIKGLEIKG 197
           G + THF N +G+    HY TA DM           ++    +   Y   +       K 
Sbjct: 195 GATKTHFENPNGLTSDEHYVTAYDMYLIFNAAMQYDTFSEIINMNSYTTSYIDATGASKD 254

Query: 198 KKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRN 250
               NTN        V + +   G KTG T A+G  ++  A        IAVI+   D  
Sbjct: 255 VDISNTNGFLTGAKPVPSGVTVIGGKTGTTQAAGHCLILLARDTAGNPYIAVIMRDTDSG 314

Query: 251 TRNKVSASLLS 261
           T     A LL+
Sbjct: 315 TLYNDMAQLLN 325


>gi|331091254|ref|ZP_08340095.1| hypothetical protein HMPREF9477_00738 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404701|gb|EGG84240.1| hypothetical protein HMPREF9477_00738 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 235

 Score = 97.7 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 11/199 (5%)

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK------- 199
           +  THF+N +G+   GH TTARD+A++S  + T +P+   Y +I    I  +        
Sbjct: 1   MKNTHFVNCNGLDADGHLTTARDIALMSRELITKYPEVHKYTKIWQENITHETKKGTSKF 60

Query: 200 -YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
              NTN  +  +  A G+KTG T  + F + A+A +   +LIAV++ + +   R K + +
Sbjct: 61  GLTNTNKFIRQYPYATGLKTGSTGKAKFCLSATAEKDKVNLIAVVMASPNAKQRVKDAVT 120

Query: 259 LLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
           L++ GF       D   I        +           ++         + +   K+ K 
Sbjct: 121 LMNYGFGKCRKYEDEAPIKIKEVQVKRGQEEAVDIQAEKKFKYIDSSGSDLSNIKKKVKM 180

Query: 316 KESHFIDFEKITLLKNKIT 334
           KE+     +K   L   I 
Sbjct: 181 KENISAPIKKGEKLGRVIY 199


>gi|254248244|ref|ZP_04941564.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia cenocepacia
           PC184]
 gi|124874745|gb|EAY64735.1| D-alanyl-D-alanine carboxypeptidase [Burkholderia cenocepacia
           PC184]
          Length = 326

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 92/255 (36%), Gaps = 8/255 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +L++         +       +LD ++G  +           AS++KLMTA V  +  + 
Sbjct: 70  LLASCGYTPRAVGSLHSRAAYVLDVDSGTPLLARNARTVRPIASISKLMTAVVARNADRP 129

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
              +L       ++      + S  + GS ++      + ++ S N  A A++       
Sbjct: 130 LNGVLRVTA---RDRDTIKFTGSRLQVGSELSRREMFHIALMSSENRAAAALSRDYPGGR 186

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH----Y 187
             FV+ MN  ++ LG+  THF    G+    + +TA D+A L      D           
Sbjct: 187 AAFVKAMNREARRLGMRHTHFREPTGL-SPHNVSTAEDLARLVGAAAQDPLIRYFSTDLS 245

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
             ++  + +     +        L     KTGF   SG  +V       +    V+LGA 
Sbjct: 246 TTVRPGDGELVYVNSDPLVRYRRLPIRLQKTGFINESGHGVVMRMRVKGRRETVVLLGAA 305

Query: 248 DRNTRNKVSASLLSM 262
            R   +  +  +   
Sbjct: 306 TRAGVSSDAIKIHRW 320


>gi|168070883|ref|XP_001786972.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162660038|gb|EDQ48214.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 228

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 24/205 (11%)

Query: 6   VIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           + +++A+L+              +           LL+  TG ++    PD P  PAS++
Sbjct: 24  LFLSVAVLATAMGGAATKADAAPAADLQLAAKSAILLEATTGKILYATNPDVPLPPASMS 83

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS----TFKKGSTMTLDNALKLLIV 113
           K+M+ Y+V   +K+KK      + +S+ A      +         G + ++    K + V
Sbjct: 84  KMMSEYLVQEAVKQKKISWDEQVPVSEYAFYVAKISDASGVYLNAGESFSVKELYKAMAV 143

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH------------ 161
            SAND  V +AE +  +E  FVQ MN  +K LG++ T F+ + G+  +            
Sbjct: 144 VSANDATVLLAEKVAGSEPNFVQMMNKKAKELGMTNTSFVTSTGLPANELGPYSVQTDQV 203

Query: 162 GHYTTARDMAILSWRIKTDFPQYMH 186
            +  +ARD AIL+  +  DFP+ + 
Sbjct: 204 ENLMSARDSAILARALIRDFPEAIE 228


>gi|262197058|ref|YP_003268267.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Haliangium
           ochraceum DSM 14365]
 gi|262080405|gb|ACY16374.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Haliangium
           ochraceum DSM 14365]
          Length = 340

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 15/241 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
              + P   +LD  TG  +   + D     AS  K+  A VV    +E+   L     IS
Sbjct: 53  PNVQAPRAVILDAETGEPLFAKHADEVAAIASTGKIFVAMVV----RERGIDLEAVTEIS 108

Query: 84  K--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
           +         + +    G      + L+ ++V S N   +A+  ++  + ++ V  MN+ 
Sbjct: 109 EVDRMYARGGARTRLDVGHGFRNIDLLRAMLVSSDNRAPIALGRAVGLSPEQLVAAMNHM 168

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK------GLEI 195
           +  LGL  T F    G+   G+ +TA +MAI       D          +        + 
Sbjct: 169 ASELGLRHTRFTCPSGL--RGNVSTAYEMAIALRAALADPVLAEIMGTAEVNVRSLHSKP 226

Query: 196 KGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNK 254
           +   Y NTN ++        G KTGFT A+G+ +V +A    + +I    G     TR  
Sbjct: 227 RAIDYRNTNLSLRRSSFEVLGGKTGFTRAAGYCLVVAARLAGRDVIMAFFGETHELTRFG 286

Query: 255 V 255
            
Sbjct: 287 D 287


>gi|221635723|ref|YP_002523599.1| D,D carboxypeptidase [Thermomicrobium roseum DSM 5159]
 gi|221158037|gb|ACM07155.1| D,D carboxypeptidase [Thermomicrobium roseum DSM 5159]
          Length = 323

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 100/253 (39%), Gaps = 23/253 (9%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  ++D  T  ++ E     P  PAS  KL+TA      L  ++      +     
Sbjct: 67  LSARSVLVVDLTTDRILLERASRTPLPPASTLKLLTALTAVEILSFEEI---VTVQPEDT 123

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES---------LCKTEKKFVQ 136
                 S      G T+T+ + L  L++ S ND A A+A S              ++F+ 
Sbjct: 124 VDPARESAMGLDVGDTITVHDLLLGLLLPSGNDAARALARSAGERLAGPPDRPPRERFLV 183

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP------QYMHYFQI 190
            M   ++ LGLS T  +   G    G  T+ARD+  L+                    ++
Sbjct: 184 AMQEKARELGLSETVVLTPDGDDVPGQTTSARDLLQLARATLDHPELAALVALRTAQVRV 243

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILGALDR 249
            G + +  +  NTN  +G   G  G+KTG T  +G  +VA+      ++ +A++LG+ D 
Sbjct: 244 GGPKARVLELRNTNELLGQH-GVIGIKTGTTPEAGQCLVAAWRTSDGRTFVAIVLGSQD- 301

Query: 250 NTRNKVSASLLSM 262
             R     +++  
Sbjct: 302 --RYGDMRAIIDW 312


>gi|17987196|ref|NP_539830.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase
           fraction C) [Brucella melitensis bv. 1 str. 16M]
 gi|260564074|ref|ZP_05834560.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|265991153|ref|ZP_06103710.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|17982866|gb|AAL52094.1| penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidase
           fraction c) [Brucella melitensis bv. 1 str. 16M]
 gi|260154090|gb|EEW89182.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis bv. 1 str.
           16M]
 gi|263001937|gb|EEZ14512.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 205

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 1/182 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQ 189
           F 
Sbjct: 204 FS 205


>gi|118381024|ref|XP_001023674.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
            thermophila]
 gi|89305441|gb|EAS03429.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
            thermophila SB210]
          Length = 1098

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 58/308 (18%), Positives = 114/308 (37%), Gaps = 55/308 (17%)

Query: 22   IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML-TTPI 80
                     +++ +++T   I     +     ASLTK+MT YV   FL+E +  +    I
Sbjct: 773  QPPEVSSKCWSVFNSDTNEFIFGKSHNFQVEIASLTKIMTCYVTIKFLEENQLDIKNVFI 832

Query: 81   TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------------- 127
             +SK A++   + +  +KG  ++    L  L++ S ND AV ++E +             
Sbjct: 833  EVSKAATKTIGTTANLEKGDFVSTYELLYGLMLPSGNDAAVVLSEGVGYLLYCQQSKLSF 892

Query: 128  ----------------------------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                                         +    F++ MN  ++ +GL  T++   HG+ 
Sbjct: 893  TNDNTSSGVPGDQKIYVNYKCKSEAGGLNQCMNIFIKEMNKQAQKVGLERTNYACVHGLS 952

Query: 160  QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------- 211
               + +TA+D+ +LS  +             +   +       +N     +         
Sbjct: 953  NKYNTSTAKDVGLLSCIVMKHPLIQKVVNTKEYETVDVLDQEKSNQDQYEWENTNQMLEK 1012

Query: 212  -GADGMKTGFTCASGFNIVASAI--QGDQS--LIAVILGALDRNTRNKVSASLLSMGFYN 266
             G DG+KTG T  +G  + +S    +  +   LI V+L     + R   +  L+     +
Sbjct: 1013 KGYDGVKTGVTETAGPCLSSSYKCKRNGKQVGLICVLLNCKSMDHRWPETKQLIKWALKS 1072

Query: 267  KTDRKKIN 274
               ++K  
Sbjct: 1073 YFPKEKKQ 1080


>gi|239637166|ref|ZP_04678158.1| penicillin binding protein 4 [Staphylococcus warneri L37603]
 gi|239597298|gb|EEQ79803.1| penicillin binding protein 4 [Staphylococcus warneri L37603]
          Length = 412

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 70/360 (19%), Positives = 142/360 (39%), Gaps = 50/360 (13%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYY---------------TLLDTNTGHVIAE 44
           M++ F  ++ + M   +      AE + +                   ++ T  G ++ +
Sbjct: 1   MKKVFTSLMMIMMCLVLISPTVFAEQSPVDVAKQEHQDIDKQYNPKGMIVTTKDGQILYD 60

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGS 100
            +     +PAS TKLMT  +V+  +K  K  +   + I+    +       +    K+G+
Sbjct: 61  YHGSTQVDPASTTKLMTMNLVYDDIKSGKIKMNDKVKITSRYEKMSELPNLTTFPLKEGT 120

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG--- 157
           T+T++  LK   ++S+N   + +AE +  +  KF   MN  +K+LG+  T F N  G   
Sbjct: 121 TVTINQLLKQAALESSNAATLVLAEHIDGSSSKFTDRMNQKAKDLGMKDTTFTNPSGANN 180

Query: 158 -----------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-- 204
                            +TTARDM++LS  I    P  +   ++   +   ++  NTN  
Sbjct: 181 KILKPYEPKSYKDDTISHTTARDMSLLSNHILNAHPDVLKITKLSKDKQSNQELHNTNTS 240

Query: 205 --WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVS 256
                      DG+KTG T  +G+N+  +A +    ++  I           ++ R K++
Sbjct: 241 LPNEADGMKDVDGLKTG-TSDNGYNLELTAKRNHLRIVTGIFNVKPYPDEQAKHARQKLA 299

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
            +L    F     RK I+    +     +  +   + +++     +  +         ++
Sbjct: 300 NALTEHAFKQYDYRKVISKGEHE-----IDGKKYEVKKDLYDLVPKDKSKYQLKVSDDNQ 354


>gi|265994989|ref|ZP_06107546.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|265999456|ref|ZP_06111697.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|262766102|gb|EEZ11891.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella melitensis bv. 3
           str. Ether]
 gi|263094078|gb|EEZ18000.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
          Length = 205

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 1/182 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 24  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 83

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 84  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 143

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 144 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 203

Query: 188 FQ 189
           F 
Sbjct: 204 FS 205


>gi|153814890|ref|ZP_01967558.1| hypothetical protein RUMTOR_01105 [Ruminococcus torques ATCC 27756]
 gi|331089590|ref|ZP_08338489.1| hypothetical protein HMPREF1025_02072 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847921|gb|EDK24839.1| hypothetical protein RUMTOR_01105 [Ruminococcus torques ATCC 27756]
 gi|330404958|gb|EGG84496.1| hypothetical protein HMPREF1025_02072 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 350

 Score = 97.4 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 18/229 (7%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS TK+MTAY+     K         ++ +     +  S      G ++TL + + 
Sbjct: 123 KLYPASTTKVMTAYLAL---KYGNLDDVVTMSATSTNFNWDESTCGLSAGDSLTLYDLIC 179

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+++S ND A AIAE +  +++ F + MN  +K LG + THF+N HG+    HYTT  D
Sbjct: 180 GLLLQSGNDCAAAIAEHISGSQEAFAELMNTEAKQLGATGTHFVNPHGLHDENHYTTTYD 239

Query: 170 MAILSWRIKTDF--------------PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
           + ++      D                                 Y          +   G
Sbjct: 240 LYLMFNEALKDQAFLDIISMNSYTAKVTSADGTSYTPTWQATNYYSAGEATPPDGIHVYG 299

Query: 216 MKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTRNKVSASLLSMG 263
            KTG T  +G  ++        +  I+VI+GA D+    +    LL  G
Sbjct: 300 GKTGTTDQAGNCVILYEKNTAGEPYISVIMGASDKPLLYEEMNELLDAG 348


>gi|331001799|ref|ZP_08325321.1| hypothetical protein HMPREF0491_00183 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412773|gb|EGG92156.1| hypothetical protein HMPREF0491_00183 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 327

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 21/252 (8%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK-EKKAMLTTPITIS 83
                   L+ +  G ++A         PAS TK+MTA V   +     +  +     IS
Sbjct: 76  DISSESIILV-STEGSLLASKAATKRMYPASTTKVMTALVALKYGNLSDEITVPEESVIS 134

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +  +     N     G  +TLD  L  L++ S ND A AIA  +  +   FV+ MN+ +K
Sbjct: 135 EAGASLAGLN----PGDKLTLDELLYGLMLPSGNDAANAIAVHIGGSVDNFVRMMNDEAK 190

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK------- 196
            +G   T+FMNAHG+    HYTTA D+ ++      D     +                 
Sbjct: 191 RIGAVDTNFMNAHGLSDENHYTTAYDLYLIFNEALKDSRFLNYAGTASYNVSYIAADGSE 250

Query: 197 -GKKYPNTNWA---VGTFLG---ADGMKTGFTCASGFNI-VASAIQGDQSLIAVILGALD 248
             K + N N          G    +  KTG T A+G  + + S  +     I+V+L + +
Sbjct: 251 VTKSWRNGNRYLTGQVATPGGLVVEAGKTGTTLAAGSCLVICSENKEGSKYISVVLKSKN 310

Query: 249 RNTRNKVSASLL 260
           R       + LL
Sbjct: 311 RADLYDNMSKLL 322


>gi|261222159|ref|ZP_05936440.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|265998124|ref|ZP_06110681.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
 gi|260920743|gb|EEX87396.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti B1/94]
 gi|262552592|gb|EEZ08582.1| serine-type D-Ala-D-Ala carboxypeptidase [Brucella ceti M490/95/1]
          Length = 199

 Score = 97.0 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 60/185 (32%), Positives = 91/185 (49%), Gaps = 5/185 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+        + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPPAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+  L+  I 
Sbjct: 135 GAIVLAEGLAGSEQTFAGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNLARHIH 194

Query: 179 TDFPQ 183
              P+
Sbjct: 195 AAHPE 199


>gi|227485595|ref|ZP_03915911.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236461|gb|EEI86476.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 289

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 18/261 (6%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
             +S      +  +        L D      +     +     ASLTK+MT  V    ++
Sbjct: 18  VFISTRVKKQAEDQNFISKAVYLYDLTDDKEVLAKNENERLPMASLTKIMTVRVALKHIR 77

Query: 71  E-KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
           +  +          +   E   S + F  G T T  + L   +++SA + A ++A ++  
Sbjct: 78  DLGQIAPVDTDAYYRA-VEMNASMAGFNGGETTTYRDLLYATMLRSAGEAADSLAINISG 136

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
           +  KFV  MN  +K+L L  T + NA G+    +Y +A+D A+L      D      + +
Sbjct: 137 SMDKFVDLMNQEAKDLKLKNTSYANADGMDNPSNYQSAKDCAMLIKDSLKDGNFRAIFTK 196

Query: 190 IKGLEIKGKKYP-------NTNWAVGTFLG----ADGMKTGFTCASGFNIVASAIQGDQS 238
                     +P          + +  +        G K+G T  +G      A++ ++ 
Sbjct: 197 KDFKTSPTVNHPDGVYLESTIFYHLKKYQQNGFEIIGGKSGTTDDAGLCWATLAVKNNKE 256

Query: 239 LIAVILGALDRNTRNKVSASL 259
            I V++G            +L
Sbjct: 257 YILVVMGVP-----YDDINNL 272


>gi|326409095|gb|ADZ66160.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella
           melitensis M28]
 gi|326538799|gb|ADZ87014.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase
           fraction C) [Brucella melitensis M5-90]
          Length = 192

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 1/182 (0%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A ++     L  +       + + D ++G ++ ++       PASL K+MT Y+ F  
Sbjct: 11  FFASVAFGTAVLCASGAMASTSWVVFDADSGRMLGQDDASAQHAPASLAKMMTLYLTFEA 70

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  +      + ISKNA+         K G T++  +A+  +I+ SAND A  + E L 
Sbjct: 71  LKTGRLHWDDALPISKNAASKVRMKLWLKAGDTISTRDAVNGMIIVSANDAATVMGEYLA 130

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +E  F + M   ++ +G+ +T F N  G+       TTARDMA+L   ++ DFP+    
Sbjct: 131 GSEAAFARLMTQRARQIGMKSTIFANPSGLTANVSQLTTARDMAVLGMALRRDFPEEYAL 190

Query: 188 FQ 189
           F 
Sbjct: 191 FS 192


>gi|331091259|ref|ZP_08340100.1| hypothetical protein HMPREF9477_00743 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404706|gb|EGG84245.1| hypothetical protein HMPREF9477_00743 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 125

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 1   MRQFLVIIAMAMLS---NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
           M+  + +I   +L                +     +++ +TG +I E   D    PAS+T
Sbjct: 1   MKVIVSVIISCLLLGECVYAAPQKEEAKIEAVSGIVMEASTGKMIYEKNADEKLPPASVT 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MT  ++F  ++  +  L   +T+S+ A+    S    + G T T++  LK + V SAN
Sbjct: 61  KVMTMLLIFDAIESGEIKLEDNVTVSEFAASMGGSQVFLEPGETQTVETMLKCIAVASAN 120

Query: 118 DIAV 121
           D  V
Sbjct: 121 DACV 124


>gi|331083982|ref|ZP_08333089.1| hypothetical protein HMPREF0992_02013 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330402344|gb|EGG81914.1| hypothetical protein HMPREF0992_02013 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 301

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 54/238 (22%), Positives = 85/238 (35%), Gaps = 12/238 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   LLD   G ++     +    PASLTK+MT  +    L   + +      I  
Sbjct: 47  ELYSEAAILLDEE-GQILGRKNSEKKIYPASLTKIMTVLLSIEKLDNIREITVLREEIFP 105

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F  G  +T  + L   ++ S  +  VA+AE  C +EK+FV  MN  +K 
Sbjct: 106 ELYAQDASMAGFLPGEKVTYRDLLYGAMLPSGAECCVALAEGSCGSEKEFVSEMNKKAKK 165

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD-----------FPQYMHYFQIKGL 193
           L +  THF N  G+    HYTT  D++ L      +           +         +G 
Sbjct: 166 LVMKNTHFTNTTGLHDDNHYTTVEDLSRLLCYAMKNQDFSKIFTAFSYSVPATNKHPEGF 225

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                       A        G KTG+T  +G  +  +A    +    +   A   + 
Sbjct: 226 TFFSTLSQELQKAGVKDSCILGGKTGYTSNAGLCLATAAEINGKKYFFITAHAQGSHN 283


>gi|313906127|ref|ZP_07839476.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Eubacterium
           cellulosolvens 6]
 gi|313469014|gb|EFR64367.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Eubacterium
           cellulosolvens 6]
          Length = 544

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 94/249 (37%), Gaps = 16/249 (6%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
            P   ++  +   +I +   +    PAS+TK+MT  V    +   +  +T        A 
Sbjct: 288 SPNACMMRLSDNKIILDMNSNQRIYPASMTKIMTTLVAIEHITNLEDTVTFTGGEYDRAY 347

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               + + F  G  ++ ++ L  +++ S  D   AIA++L  +E  FV  MN  ++ LG+
Sbjct: 348 TEGATTANFMAGDVVSYNDVLYGIMLPSGADACYAIADALGGSEAGFVNMMNEKAQQLGM 407

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT---N 204
           + THF N  G+    HYTT  DM  L      +      +             P+    +
Sbjct: 408 NDTHFTNCTGLTNEDHYTTCADMIKLLQAALQNETFKTVFCTHVHTTGPLGLNPDGLQLS 467

Query: 205 WAVGTFLG---------ADGMKTGFTCASGFNIVASAI-QGDQSLIAVILGALDRNT--- 251
               T+LG           G KTGFT  +G  + + A        I V  GA        
Sbjct: 468 STAFTYLGSPLLQNGTEITGTKTGFTDEAGHCLASCAKAGDGTEYILVTAGANTEEDPNP 527

Query: 252 RNKVSASLL 260
               +  L 
Sbjct: 528 HLADAKYLY 536


>gi|254302479|ref|ZP_04969837.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148322671|gb|EDK87921.1| serine-type D-Ala-D-Ala carboxypeptidase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 426

 Score = 97.0 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 100/250 (40%), Gaps = 10/250 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               + DT  G+VI     D  +  AS+TK+M+  V F  +      L+  + ISKN  +
Sbjct: 172 RAVIVGDTK-GNVIFAKDADTMYPLASVTKMMSLMVTFDEINAGNISLSDSVRISKNPLK 230

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQHMNNTSKNLGL 147
           Y  S    K G    L++ +K   V SAN+   AIAE +   +   FV  MN   K LGL
Sbjct: 231 YGGSGIPLKAGQIFILEDLIKASAVYSANNATYAIAEYVGNGSVFGFVAKMNRKLKELGL 290

Query: 148 SA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF------QIKGLEIKGKKY 200
                +    G+          +         +        +      +   +  +    
Sbjct: 291 QNEIRYHTPAGLPTRVTKQPMDEGTARGIYKLSIEALKYKKYIEIAGIKKTKIYNEKISI 350

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            N N  +G   G  G+KTGF   + +NI  ++   D  +I V++G     TR+ +  S+L
Sbjct: 351 RNRNHLIGEN-GVYGIKTGFHKEAKYNIAVASKFEDTDVIIVVMGGETYKTRDGIVLSVL 409

Query: 261 SMGFYNKTDR 270
            +   N T +
Sbjct: 410 DILNNNYTVK 419


>gi|269123185|ref|YP_003305762.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Streptobacillus moniliformis DSM 12112]
 gi|268314511|gb|ACZ00885.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Streptobacillus moniliformis DSM 12112]
          Length = 281

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 103/267 (38%), Gaps = 17/267 (6%)

Query: 1   MRQFLVII-AMAMLSNIFPFLSIAETNKL---------PYYTLLDTNTGHVIAENYPDHP 50
           M++ L+ I +     +I    ++                   + D               
Sbjct: 1   MKKILLFILSAIFSFSINLSENLENEMYAILNYDHRLYKSMYIGDDENNK-YYSYNETST 59

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
              ASLTKLMTA ++F  ++E K  L T + +SK AS+ P      +       +    L
Sbjct: 60  RPLASLTKLMTALIIFDDIQEGKYELNTEVVVSKEASKVPYGVVIKENRIYTIEELLHLL 119

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY-----T 165
           LI  S +        S      +FV  MN  +K+LGL +  F   HG+            
Sbjct: 120 LINSSNSSAYQLALFSSFGNVDEFVDKMNKKAKSLGLRSLRFRTPHGLPPVDTNKAMDIG 179

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
            ARD+ +L+     +        +       G K  +TN  V       G+KTGF   +G
Sbjct: 180 NARDIYLLALNALNNEKLIEISKKYSYETSDGIKIKSTNTLVQLDE-VLGLKTGFHRRAG 238

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTR 252
           +NIV     GD+ +I VILGA   ++R
Sbjct: 239 YNIVYLIDNGDKKIIQVILGANTISSR 265


>gi|71902908|ref|YP_279711.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS6180]
 gi|71802003|gb|AAX71356.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS6180]
          Length = 393

 Score = 96.6 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 135/340 (39%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIA--------------ETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +                 E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSVMPLVQAEDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|71910061|ref|YP_281611.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS5005]
 gi|71852843|gb|AAZ50866.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS5005]
          Length = 393

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 72/351 (20%), Positives = 139/351 (39%), Gaps = 49/351 (13%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSVMPLVHAEDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRVNATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV--- 255
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D + +N     
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYI 302

Query: 256 ---SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEI 303
                +L   GF +     K      +        E  +  +    T+K+ 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSSKQQHFKATKKQS 353


>gi|323225526|gb|EGA09756.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323251306|gb|EGA35178.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
          Length = 210

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 5/168 (2%)

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNI 228
           MA++   +  D P     ++ K     G +  N N  +       DG+KTG T  +G+N+
Sbjct: 1   MALIGQALIRDVPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNL 60

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQN 284
           VASA +G   LI+ ++G      R   S  LL+ GF        +        +  +  N
Sbjct: 61  VASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGN 120

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                  + ++V  T       + +     +        +K  ++   
Sbjct: 121 TDRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 168


>gi|225867884|ref|YP_002743832.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701160|emb|CAW98052.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus equi
           subsp. zooepidemicus]
          Length = 393

 Score = 96.6 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 128/333 (38%), Gaps = 35/333 (10%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +++E NK     ++D  T  ++ ++  D P +PAS++K+ T Y++F  L + K  L 
Sbjct: 33  AGYTVSEVNKPKASIVVDAKTSEILWQDNIDMPRDPASMSKMFTLYILFEELAKGKITLD 92

Query: 78  TPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEK 132
           T IT ++           SN+    G    + + + + +V S+N   V IA         
Sbjct: 93  TTITATETDQAISKIYEISNNNIVAGVAYPIRDLIIMTVVPSSNAATVMIANYLSNNDAS 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH---------------GHYTTARDMAILSWRI 177
            F+  +N T+K LG++ THF NA G +                  + TTARD A L +  
Sbjct: 153 AFIDRINKTAKELGMTNTHFSNASGAIAQAFQGYYVPEKYDLTASNITTARDFATLIYYF 212

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNI 228
             ++P  + +     +           +               G DGMKTG + ++ FN 
Sbjct: 213 LNNYPSILDFTNQTVVRTMVGTPYEEEFHSYNHSLPDGKFGIEGVDGMKTGSSPSAAFNA 272

Query: 229 VASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           V +A +G+  LI V+LG  D +       R+    +L    F +     K          
Sbjct: 273 VVTAKRGNTRLITVVLGVGDWSDQNGEFYRHPFINALTEKAFKDSKTLTKAKRSKLKRLV 332

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
              ++       ++     +        +   D
Sbjct: 333 AKPASTAAAAKRQLPQATTDQSFLEKIEQFVDD 365


>gi|227524141|ref|ZP_03954190.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus hilgardii ATCC
           8290]
 gi|227088698|gb|EEI24010.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus hilgardii ATCC
           8290]
          Length = 393

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 32/267 (11%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                 ++  TG ++     + P   AS++KLMT Y+V   +        + +  S +  
Sbjct: 126 AKAAIAMNEKTGKILWSKNSNMPRAIASVSKLMTLYLVDKKVATAAYSWNSKVNTSYSGL 185

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIV----KSANDIAVAIAES-----LCKTEKKFVQHM 138
           +    +  +           +K L       S+N+ A+A+ +           K FV+ M
Sbjct: 186 KSLGQSLVYGGFKFTKNSYTVKELYEAALIDSSNNAAIALGQWVAGGGTPSYNKSFVKLM 245

Query: 139 NNTSKNLGLSATHFMNAHGVV-------------QHGHYTTARDMAILSWRIKTDFPQYM 185
           N  +K+  L    F+ A+G+               + +  +A+D+A+++  + TD+P  +
Sbjct: 246 NRQAKSWNLGKATFVTANGMEQNALKGYGYSTSGGNANLVSAKDVALIARHLITDYPSTL 305

Query: 186 HYFQIKGLEIKGKKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-S 238
            Y +IK +++ G+   N N            L  DG+KTGFT  +G+  V +  +     
Sbjct: 306 TYSKIKSMKVSGQLCYNYNNLLSGRAFYQKSLDVDGLKTGFTDLAGYCFVGTGKKTGHDR 365

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFY 265
           LI V+L   +       + SL++  + 
Sbjct: 366 LITVVLHDQNE---FTETRSLMNYVYN 389


>gi|218133984|ref|ZP_03462788.1| hypothetical protein BACPEC_01874 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991359|gb|EEC57365.1| hypothetical protein BACPEC_01874 [Bacteroides pectinophilus ATCC
           43243]
          Length = 401

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 99/248 (39%), Gaps = 11/248 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E  K  Y +L+D ++  +IA    D    PAS+TK+MT  +    +++     T    + 
Sbjct: 149 EKVKSAYISLVDIDSHEIIAGRQYDAKIYPASMTKVMTLIIAVENIRDMNDTFTMTTELI 208

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                   S + F  G  +T ++ L  LI+ S  D A A+A  +  +E+++   MN    
Sbjct: 209 DPLVRENASRAGFDPGEKVTANDLLYGLILPSGADAAQALARMIAGSEEEYAGLMNAKCA 268

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-- 201
            +GL  THF N  G+     YTT  +M ++      +          +       ++P  
Sbjct: 269 EIGLKNTHFANTSGLYDADQYTTPVEMGMIMEYAMQNELCAKVLSTYQYTTAPSPQHPGG 328

Query: 202 ---NTNWAVGTF----LGA--DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
               +      +     G      KTG+   SG  +V+ A++GD+  + V  G  ++   
Sbjct: 329 IALTSTMFSRMYGTEAEGVTITAGKTGYITESGNCLVSYAVKGDKHYVCVTSGGTNKWDS 388

Query: 253 NKVSASLL 260
                 L 
Sbjct: 389 IFDDIELY 396


>gi|317500403|ref|ZP_07958627.1| serine-type D-Ala-D-Ala carboxypeptidase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316898158|gb|EFV20205.1| serine-type D-Ala-D-Ala carboxypeptidase [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 298

 Score = 96.2 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 18/229 (7%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              PAS TK+MTAY+     K         ++ +     +  S      G ++TL + + 
Sbjct: 71  KLYPASTTKVMTAYLAL---KYGNLDDVVTMSATSTNFNWDESTCGLSAGDSLTLYDLIC 127

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
            L+++S ND A AIAE +  +++ F + MN  +K LG + THF+N HG+    HYTT  D
Sbjct: 128 GLLLQSGNDCAAAIAEHISGSQEAFAELMNTEAKQLGATGTHFVNPHGLHDENHYTTTYD 187

Query: 170 MAILSWRIKTDF--------------PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
           + ++      D                                 Y          +   G
Sbjct: 188 LYLMFNEALKDQAFLDIISMNSYTAKVTSADGTSYTPTWQATNYYSAGEATPPDGIHVYG 247

Query: 216 MKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDRNTRNKVSASLLSMG 263
            KTG T  +G  ++        +  I+VI+GA D+    +    LL  G
Sbjct: 248 GKTGTTDQAGNCVILYEKNTAGEPYISVIMGASDKPLLYEEMNELLDAG 296


>gi|50913624|ref|YP_059596.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10394]
 gi|50902698|gb|AAT86413.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10394]
          Length = 393

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 133/340 (39%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK--------------LPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +   +                      ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVIDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|139473104|ref|YP_001127819.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes str.
           Manfredo]
 gi|134271350|emb|CAM29568.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes str. Manfredo]
          Length = 393

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 133/340 (39%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK--------------LPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +   +                      ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVIDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIIAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|213160842|ref|ZP_03346552.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 236

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 13/162 (8%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 39  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 98

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 99  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 158

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           + ++S ND  VA+A+    ++  FV  MN+    LGL     
Sbjct: 159 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLEKYPL 200


>gi|94987880|ref|YP_595981.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS9429]
 gi|94541388|gb|ABF31437.1| D-alanyl-D-alanine serine-type carboxypeptidase [Streptococcus
           pyogenes MGAS9429]
          Length = 393

 Score = 96.2 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYTFLRKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|19745419|ref|NP_606555.1| DD-carboxypeptidase [Streptococcus pyogenes MGAS8232]
 gi|19747530|gb|AAL97054.1| putative DD-carboxypeptidase [Streptococcus pyogenes MGAS8232]
          Length = 393

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 133/340 (39%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK--------------LPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +   +                      ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVIDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|306828007|ref|ZP_07461273.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus pyogenes
           ATCC 10782]
 gi|304429788|gb|EFM32831.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus pyogenes
           ATCC 10782]
          Length = 393

 Score = 95.8 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 133/340 (39%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNK--------------LPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +   +                      ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVIDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|145522840|ref|XP_001447264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414764|emb|CAK79867.1| unnamed protein product [Paramecium tetraurelia]
          Length = 272

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 8/224 (3%)

Query: 51  WNPASLTKLMTAYVVFSFLKEKKA-MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              AS+TK+MT YVV +  +        T   +S  AS    + +   KG  +++++   
Sbjct: 47  REIASITKIMTFYVVLNMCRTMNVHTNNTYAEVSLQASLVGGTTADLLKGDVVSIEDLFY 106

Query: 110 LLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            L++ S ND A+ +AE+  K     F+Q MNN ++ L ++ T + N HG+    + ++A 
Sbjct: 107 GLMLPSGNDAAMTLAENFGKNPLIYFIQEMNNKARELQMTQTTYANPHGLNNKNNVSSAY 166

Query: 169 DMAILSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           D++ L  ++  D           H+  I+  E   +     N     + G  G+KTG T 
Sbjct: 167 DVSKLCNQLLKDEFFRKVVNTKIHFTTIQDEEGFTRDVIWENTNKLLYQGFKGIKTGNTS 226

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +G  + +      +S   VILG  ++  R   +  LL      
Sbjct: 227 VAGPCLASYYQTASRSFTIVILGCRNQEDRWSETMQLLQWCLSQ 270


>gi|331701010|ref|YP_004397969.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128353|gb|AEB72906.1| Serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus buchneri
           NRRL B-30929]
          Length = 396

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 33/269 (12%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                 LD NT + +     +     ASL+KLMT Y+V   + + K   ++ +T S    
Sbjct: 128 AKSAVALDVNTNNNVWTKNANTARPIASLSKLMTLYLVRQKISQGKGTWSSKVTTSNAGL 187

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLI----VKSANDIAVAIAES-----LCKTEKKFVQHM 138
           +    ++ F           ++ L     ++S+N+ A+A+ +           KKF+  M
Sbjct: 188 KKLGKSNVFGGFKFNHNSYTVRQLYLAGLIESSNNAAIALGQWVAGGSTPDYNKKFIGMM 247

Query: 139 NNTSKNLGLSATHFMNAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQY 184
           NN +K  GL  + F++A G+               ++ +Y +A D+A +S     D+   
Sbjct: 248 NNQAKEWGLKHSSFVSASGMEQNSLAPYGYSIGASKNANYVSASDIAQISRHFVVDYNDI 307

Query: 185 MHYFQIKGLEIKGKKYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ- 237
           +    +K +++ G+   N N            L  DG+KTG+T  +G+  V +  +    
Sbjct: 308 LTDASVKSMKVDGQTLHNYNNLLPGRKYYQKSLNVDGLKTGYTDPAGYCFVGTGRKSGHD 367

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYN 266
            +I V+L   +       + SL++  +  
Sbjct: 368 RIITVVLHDENE---FTETRSLMNYVYNQ 393


>gi|294852417|ref|ZP_06793090.1| predicted protein [Brucella sp. NVSL 07-0026]
 gi|294821006|gb|EFG38005.1| predicted protein [Brucella sp. NVSL 07-0026]
          Length = 258

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 5/194 (2%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A+ +      + +   K P   L+D  +G V+     D P  PASL KLMTA 
Sbjct: 15  LLGTVFAAVPAAWAAPANSSIVTKAPQALLIDDRSGTVLLSKGADKPVPPASLAKLMTAE 74

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-----SNSTFKKGSTMTLDNALKLLIVKSAND 118
           VVF  L++ +  L T   +S+ A          S    +  ST T+ + L+ +IV+SAND
Sbjct: 75  VVFEALEKGRTTLETAYPVSEYAWRTGGAPSGTSTMFARIKSTPTVADLLQGMIVQSAND 134

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
            A+ +AE L  +E+ F   MN  +K LGLS++ F+N+ G+   G   T  D+        
Sbjct: 135 GAIVLAEGLAGSEQTFAGAMNQRAKELGLSSSKFVNSTGLPAAGQVVTLEDLLNSLAISM 194

Query: 179 TDFPQYMHYFQIKG 192
              P  +       
Sbjct: 195 RRIPNIIDIMSSPP 208


>gi|326201438|ref|ZP_08191309.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           papyrosolvens DSM 2782]
 gi|325988038|gb|EGD48863.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Clostridium
           papyrosolvens DSM 2782]
          Length = 298

 Score = 95.8 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 18/268 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-------KLPYYTLLDTNTGHVIAENYPDHPWNP 53
           M   +V++ MA+++     +    T          P   L+       + +        P
Sbjct: 12  MCILVVLMMMAVIAVFVYKIEPNPTVSIALDKLNSPNAILIRLKDHTTLLDKNSGVKIYP 71

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           ASLTK+MTA V    + + K  +    +  +   E   S + F+ G  +   + L  +++
Sbjct: 72  ASLTKIMTAIVALENIHDLKEEIKLTNSTFRGLYEADASMAGFQPGEQVRALDLLYGVLL 131

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S  +  V +A  +  +++ FV+ MN  +  LG+  THF N  G+    HYTT  D+AIL
Sbjct: 132 PSGAECCVGLANKVAGSQQNFVKMMNEKAAKLGMKNTHFENVTGLQNENHYTTVADLAIL 191

Query: 174 SWRIKTD-----------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
                 +           +          G+      +   N    T     G KTG+T 
Sbjct: 192 LSYSLKNDTFREIFTSARYSTKPTNKHTDGITFNSTMFEKLNNKKITGGEILGGKTGYTS 251

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRN 250
           A+G  + + +  G Q  + V  GA   +
Sbjct: 252 AAGLCLASLSKVGTQEYVFVTAGAKGDS 279


>gi|323225525|gb|EGA09755.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323251307|gb|EGA35179.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
          Length = 195

 Score = 95.4 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +  A +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCAAFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKL 110
           TK+MT+YV+   +K  K   T  +T+  +A                K G  + +   ++ 
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRG 134

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           + ++S ND  VA+A+    ++  FV  MN+    LGL               +    
Sbjct: 135 INLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNPTSRPYTAWTPTDNTVQL 191


>gi|225027655|ref|ZP_03716847.1| hypothetical protein EUBHAL_01914 [Eubacterium hallii DSM 3353]
 gi|224954969|gb|EEG36178.1| hypothetical protein EUBHAL_01914 [Eubacterium hallii DSM 3353]
          Length = 321

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 20/246 (8%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK-AMLTTPITISKNASEYP 90
            L++ +T  V+   +      PAS+TK+MTA +            L   I +++N +   
Sbjct: 76  LLINDSTNEVLESYHCFDRLYPASITKVMTALLTLEHGNMDDEITLKHDINLTENGAVI- 134

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
              ST  KG T+T+      +++KSAND AV +AE +  +E KF+  MN  +K LG + T
Sbjct: 135 ---STLTKGDTVTVGQVFHTMLIKSANDCAVILAEYVAGSESKFIDMMNAKAKELGATHT 191

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ---IKGLEIKGKKYPNTNWAV 207
           HF+N +G+  + HYTTA D+ ++                           K   N     
Sbjct: 192 HFVNPNGLHDNNHYTTAYDLYLIFKEAVKYDTFVDTVSSKDYTMTYTTPKKTQINEYMQS 251

Query: 208 GTF---------LGA--DGMKTGFT-CASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
             +          G    G KTG T  A    I+ +  +  +   +V+LGA  ++     
Sbjct: 252 TNYYLLNEFPVPEGVVMYGGKTGTTSMAKSCLILMTKNKKGERFFSVVLGAETKDMLYSS 311

Query: 256 SASLLS 261
            + LL 
Sbjct: 312 MSQLLE 317


>gi|291460023|ref|ZP_06599413.1| putative D-alanyl-D-alanine carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417364|gb|EFE91083.1| putative D-alanyl-D-alanine carboxypeptidase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 338

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 13/255 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +I +     Y  + D + G +IA+       NPAS+TK+MT  V    L +    LT 
Sbjct: 79  SAAIGDLINSQYAVVYDLDRGRIIADKNSSEVINPASMTKVMTLLVCAEHLPDLDKRLTV 138

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
              I      +  SN   + G  +++ + L  +I+ S  D  + ++  +  +E  FV  M
Sbjct: 139 TQDIVDYVHAHDASNCGLEAGEQISVRDLLYGVILPSGADAVMLLSREIAGSEAAFVGLM 198

Query: 139 NNTSKNLGLSA-THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM----HYFQIKGL 193
           N  ++ LGLS+  HF NA G+    H+ T +D A +      +           + I   
Sbjct: 199 NQKARELGLSSGAHFSNATGLYDPNHHMTVKDTAEILNAAMKNPTARTVLESFEYSIPAT 258

Query: 194 EIKGKKYPNTNWAVGTFLG-------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILG- 245
                    +N  +    G           KTG+   S F  V+S +        V+ G 
Sbjct: 259 NKHAAGIRLSNLFLKRIKGQDTGRVSVTAAKTGYVRQSMFCAVSSGVSESGKHYLVVSGF 318

Query: 246 ALDRNTRNKVSASLL 260
           A          A+L 
Sbjct: 319 ASSTWQCIADQAALY 333


>gi|118348894|ref|XP_001007920.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89289687|gb|EAR87675.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 328

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 116/297 (39%), Gaps = 52/297 (17%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +         + +       VI     +     ASLTK+MT  VV  F K+ +  +    
Sbjct: 9   NPPSEITCKSWCIYSLKELQVICGANQNMQLQIASLTKMMTYIVVLRFCKKHQIDIDNLQ 68

Query: 81  TI-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ--- 136
            + S+NAS    ++S  K G  +++ + L  L++ S ND A+ +AE++     K  +   
Sbjct: 69  FVVSRNASAILGTSSGLKVGDQISIRDLLFCLMLPSGNDAALCLAENIGSLLYKMQKGLV 128

Query: 137 -------------------------------HMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
                                           MNN ++ LGL+ T F N HG+    + +
Sbjct: 129 KSAYVIRNLNILNIQNESTAIQSCSVMSFVNEMNNMAQELGLNETKFSNPHGLHDKVNVS 188

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEI----------KGKKYPNTNWAVGTFLGADG 215
           +A+DMAIL+  I  +    +   Q K  +           +     NTN  +    G  G
Sbjct: 189 SAKDMAILTREIMKEDKFTLQLCQAKSYQFEVKNQIDNTCRQINLVNTNKLLEK-PGYFG 247

Query: 216 MKTGFTCASGFNIVASAIQGDQ------SLIAVILGALDRNTRNKVSASLLSMGFYN 266
           MKTG+T ++G  + +   Q D+       +I V+L +     R   +  L+   F  
Sbjct: 248 MKTGYTNSAGGCLASLFKQYDKIMAQTVEVIIVVLKSDSMENRFVDTQLLVEWYFRQ 304


>gi|94989756|ref|YP_597856.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10270]
 gi|94543264|gb|ABF33312.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10270]
          Length = 393

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|21909749|ref|NP_664017.1| putative DD-carboxypeptidase [Streptococcus pyogenes MGAS315]
 gi|21903933|gb|AAM78820.1| putative DD-carboxypeptidase [Streptococcus pyogenes MGAS315]
          Length = 393

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + L  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITLTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|209558810|ref|YP_002285282.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes NZ131]
 gi|209540011|gb|ACI60587.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes NZ131]
          Length = 393

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAENVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|94993640|ref|YP_601738.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10750]
 gi|94547148|gb|ABF37194.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS10750]
          Length = 393

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 74/340 (21%), Positives = 138/340 (40%), Gaps = 50/340 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHADDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH- 161
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G     
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQA 182

Query: 162 --------------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPN 202
                          + TTARD++ L +     +P+                   +++  
Sbjct: 183 FQGYYNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHT 242

Query: 203 TNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------R 252
            N           G DG+KTG + ++ FN + +A +G   LI +++G  D +       R
Sbjct: 243 YNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYR 302

Query: 253 NKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 303 HPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 342


>gi|118388940|ref|XP_001027563.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89309333|gb|EAS07321.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 363

 Score = 95.4 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 110/301 (36%), Gaps = 47/301 (15%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A +  +     +          + + D  TG     ++ +     ASLTK+ T  V    
Sbjct: 48  AYSSTTGQSSVIEDTPYITAKAWCIYDAKTGQYQRGHHSNEIREMASLTKMATLLVSLRL 107

Query: 69  LKEKKAMLTTPIT-ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE-- 125
           ++  K   T     +S+NA+    + S  ++   + + +    L++ S ND AV +AE  
Sbjct: 108 VERFKLDPTQLYFSVSENAANTRGTTSRLEENEWVLVKDLFYGLMLPSGNDSAVVLAENF 167

Query: 126 ---------------------------SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                                       +    K F++ MN+  +   L +T F N HG+
Sbjct: 168 GCLLYFDSIGQNKVFQEIHSVDVTEDIYVRDYMKLFLKEMNSICEEFNLKSTKFNNPHGL 227

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG----------LEIKGKKYPNTNWAVG 208
           V   +Y+T  D+A L++    +                       ++  +     N    
Sbjct: 228 VNKHNYSTCNDLARLTYFCLKNEEFRKIVATKTYRAVVKYVQFDNKVIERSILWENTNKL 287

Query: 209 TFLGADGMKTGFTCASGFNIVASAI-------QGDQSLIAVILGALDRNTRNKVSASLLS 261
              G  G+KTG T A+G  + +          + + ++I ++LG++++  R + +  L  
Sbjct: 288 LDRGFKGVKTGITVAAGACLSSWYTQTIDDYSKEECNIIIIVLGSVNQEQRFQDTIRLAD 347

Query: 262 M 262
            
Sbjct: 348 W 348


>gi|195978798|ref|YP_002124042.1| D-alanyl-D-alanine carboxypeptidase precursor DacA.3 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195975503|gb|ACG63029.1| D-alanyl-D-alanine carboxypeptidase precursor DacA.3 [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 393

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 72/333 (21%), Positives = 129/333 (38%), Gaps = 35/333 (10%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +++E N+     ++D  T  ++ ++  D P +PAS++K+ T Y++F  L + K  L 
Sbjct: 33  AGYTVSEVNRPKASIVVDAKTSEILWQDNIDMPRDPASMSKMFTLYILFEELAKGKVTLD 92

Query: 78  TPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEK 132
           T IT ++           SN+    G    + + + + +V S+N   V IA         
Sbjct: 93  TTITATETDQAISKIYEISNNNIVAGVAYPIRDLIIMTVVPSSNAATVMIANYLSNNDAS 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH---------------GHYTTARDMAILSWRI 177
            F+  +N T+K LG++ THF NA G +                  + TTARD A L +  
Sbjct: 153 AFIDRINKTAKELGMTNTHFSNASGAIAQAFQGYYLPEKYDLTASNITTARDFATLIYYF 212

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNI 228
            T++P  + +     +           +               G DGMKTG + ++ FN 
Sbjct: 213 LTNYPSILDFTNQTVVRTMVGTPYEEEFHSYNHSLPDGKFGIEGVDGMKTGSSPSAAFNA 272

Query: 229 VASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKDFYQ 282
           V +A +G+  LI V+LG  D +       R+    +L    F +     K          
Sbjct: 273 VVTAKRGNTRLITVVLGVGDWSDQNGEFYRHPFINALTEKAFKDSKTLTKAKRSKLKRLV 332

Query: 283 QNLSNEVPNISEEVCTTQKEIINYNTQMKEAKD 315
              ++       ++     +        +   D
Sbjct: 333 AKPASTAAAAKRQLPQATTDQSFLEKIEQFVDD 365


>gi|22090613|dbj|BAC06851.1| D-Ala-D-Ala carboxypeptidase homologue [Bacillus circulans]
          Length = 272

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 51/163 (31%), Gaps = 14/163 (8%)

Query: 185 MHYFQIKGLEIKGK---KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
               +   +           N N+    + G DG+KTG T  + +    +A +    LI+
Sbjct: 66  RESDKTPMINYNWMLEGNSSNVNFKKYAYQGLDGLKTGHTDEALYCFTGTAERNGMRLIS 125

Query: 242 VILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI-------IKDFYQQNLSNEVPNISE 294
           V++GA     R   +  +L  GF N   +                  +         +  
Sbjct: 126 VVMGAKTEPERFNQTRKVLDYGFTNFEFKTLAKAGTALDAQKTVPITKGVELEAPAVLKN 185

Query: 295 EVCTTQKEIINYNTQMKEAKDKES---HFIDFEKITLLKNKIT 334
           +V    K+    +T+++   D  +        +K   L     
Sbjct: 186 DVAFAVKKG-TADTKLETKVDLLAADKLVAPLKKGDKLGTATL 227


>gi|218458342|ref|ZP_03498433.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli Kim 5]
          Length = 219

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 2/166 (1%)

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
           +N +G+   G YTTARD+A+L+  ++ DFPQY  YF ++G     +  PN N  +G F G
Sbjct: 1   VNPNGLPGKGQYTTARDLAVLTVALRRDFPQYASYFSLEGFTTGQQNVPNLNMLIGRFAG 60

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           ADGMKTGF CASGFN + SA +  ++L++V+LG      R   +A+LL  GF  +     
Sbjct: 61  ADGMKTGFICASGFNQIGSATRNGRTLVSVVLGTDSLAARADATANLLQKGFTTQFPGND 120

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
               +K + Q     +V +I+ ++C+ +   I   T+ +  + K S
Sbjct: 121 TLGSLKPYGQGQD--QVTDITADICSAKGAKIRSETRDEVGRMKVS 164


>gi|255025482|ref|ZP_05297468.1| hypothetical protein LmonocytFSL_02553 [Listeria monocytogenes FSL
           J2-003]
          Length = 202

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           + ++  ++S      + A          ++ +TG ++     D     AS+TK+M  Y++
Sbjct: 5   LAVSGFLVSPKAAQAAEAPNVNANAAIAIEESTGKILYSKDADKLMGIASMTKMMDEYLL 64

Query: 66  FSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
              + + K      +TIS+ A     +   SN   + G   T+    + + + SAN  A+
Sbjct: 65  LEAIDKGKLKWDDKVTISEYAYKVSQDTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAI 124

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTAR 168
           AI+E +  +EK+FV  MN  +  L L    F+NA G+              +  +  TAR
Sbjct: 125 AISEKIAGSEKEFVDAMNKKADELNLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTAR 184

Query: 169 DMAILSWRIKTDFPQYMH 186
            MA L+  +  D+P  + 
Sbjct: 185 GMAKLAKHLINDYPDVLK 202


>gi|225871201|ref|YP_002747148.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus equi subsp. equi
           4047]
 gi|225700605|emb|CAW95136.1| putative D-alanyl-D-alanine carboxypeptidase [Streptococcus equi
           subsp. equi 4047]
          Length = 393

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/297 (23%), Positives = 122/297 (41%), Gaps = 35/297 (11%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +++E N+     ++D  T  ++ ++  D P +PAS++K+ T Y++F  L + K  L 
Sbjct: 33  AGYTVSEVNRPKASIVVDAKTSEILWQDNIDMPRDPASMSKMFTLYILFEELAKGKVTLD 92

Query: 78  TPITISKNASEYPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEK 132
           T IT ++           SN+    G    + + + + +V S+N   V IA         
Sbjct: 93  TTITATETDQAISKIYEISNNNIVAGVAYPIRDLIIMTVVPSSNAATVMIANYLSNNDAS 152

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH---------------GHYTTARDMAILSWRI 177
            F+  +N T+K LG++ THF NA G +                  + TTARD A L +  
Sbjct: 153 AFIDRINKTAKELGMTNTHFSNASGAIAQAFQGYYLPEKYDLTASNITTARDFATLIYYF 212

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNI 228
            T++P  + +     +           +               G DGMKTG + ++ FN 
Sbjct: 213 LTNYPSILDFTNQTVVRTMVGTPYEEEFHSYNHSLPDGKFGIEGVDGMKTGSSPSAAFNA 272

Query: 229 VASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINYIIKD 279
           V +A +G+  LI V+LG  D +       R+    +L    F +     K       
Sbjct: 273 VVTAKRGNTRLITVVLGVGDWSDQNGEFYRHPFINALTEKAFKDSKTLTKAKRSKLK 329


>gi|300173926|ref|YP_003773092.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888305|emb|CBL92273.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 420

 Score = 95.0 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 122/382 (31%), Gaps = 55/382 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWN 52
           MR   +I A+  +  +      A     P           ++D +TG ++A    D    
Sbjct: 1   MRHIKIIGAIVAMLFLMTTAVSANAIAKPLEIKQDVSSAIVIDASTGQILAVKNADKLGP 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK-----NASEYPPSNSTFKKGSTMTLDNA 107
            AS +KL+TAY V   +   K   +  +TISK         +  S+   K G  +T+   
Sbjct: 61  IASQSKLLTAYAVLKAINSGKIKWSDKVTISKKADLSKQDSHLFSHLAVKAGDRLTVREL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------- 158
              +I  SAND A A+AE +        + +   +K L L+ + + N+ G          
Sbjct: 121 YNTMITLSANDAAFALAEYMTPKNMTTAKALQLWAKELKLTQSTWYNSAGQINQDAFENK 180

Query: 159 -----VQHGHYTTARDMAILSW----------------RIKTDFPQYMHYFQIKGLEIKG 197
                    +  + + +AI++                  +           +   +    
Sbjct: 181 VKNAPDNAVNLASPKHVAIIAREIVQLDPNIRELATNTHVSYHLRNNYIVNEPTEMTKNW 240

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALD---RNTRN 253
               N N         +G+KTG T  SG               I V+ GA        R 
Sbjct: 241 PYLINPNHLT-----IEGLKTGSTPESGAAFTGIIKDSSGHEFITVVNGAASYMDEVQRY 295

Query: 254 KVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           + + ++++     +         +  + ++   + +      V   Q   I  N     +
Sbjct: 296 QKTLNIVNEVLEAQKATTFKKGHVLPYAKEVNLSRMKLYHMPVVVAQTRTIWINKSSDLS 355

Query: 314 KDKESHFIDFE---KITLLKNK 332
               +  +  +   K   + + 
Sbjct: 356 PKMTALDVKGKLVQKGQKIGDI 377


>gi|317471249|ref|ZP_07930614.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
 gi|316901296|gb|EFV23245.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
          Length = 198

 Score = 95.0 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 84/201 (41%), Gaps = 13/201 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET----NKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           M++   +I    L     F ++              L+D  +G V+ +         AS 
Sbjct: 1   MKKIFCVIWSLFLCLQLGFHTVRADDTLKLYAKSAILMDAGSGRVLFDKSGKSKMPNAST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           TK++T   +          L    T+SKNA+  P  +   + G    + + L  L+++S 
Sbjct: 61  TKILTCLYIIKHC-----NLEEEATVSKNAAAQPQVHLGARAGEKYKVKDLLYGLMLESY 115

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV----QHGHYTTARDMAI 172
           ND AV +AE    + + F + +N  +++ G  +THF+  +G+        H TTA D+A+
Sbjct: 116 NDCAVILAEHAAGSTENFAKKLNAEARSYGAKSTHFVTPNGLDRTDKNGIHSTTAYDLAL 175

Query: 173 LSWRIKTDFPQYMHYFQIKGL 193
           +  +   +    + +   K  
Sbjct: 176 IMKQCIKNKEFLVDHQSQKPF 196


>gi|25010217|ref|NP_734612.1| hypothetical protein gbs0142 [Streptococcus agalactiae NEM316]
 gi|77414952|ref|ZP_00791047.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae 515]
 gi|23094569|emb|CAD45787.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77158996|gb|EAO70212.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus agalactiae 515]
          Length = 395

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 74/333 (22%), Positives = 133/333 (39%), Gaps = 54/333 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
           M + +V     +LS        AE                   NK     ++D N GH++
Sbjct: 1   MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHIL 59

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKK 98
            E+  D   +PAS++K+ T Y++F  L + K  L T +T ++           SN+    
Sbjct: 60  WEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISNNNIHA 119

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           G    +   + +  V S+N   + IA          F++ +N T+K L ++ THF N  G
Sbjct: 120 GVAYPIRELITMTAVPSSNVATIMIANHLSQNNPDAFIKRINETAKKLDMTKTHFYNPSG 179

Query: 158 ---------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
                               + TTARD++IL++     +P  ++Y +   ++        
Sbjct: 180 AVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYE 239

Query: 203 TNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-- 251
             +    +          G DG+KTG + ++ FN + +A + +  LI VILG  D +   
Sbjct: 240 ETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVILGVGDWSDQD 299

Query: 252 ----RNKVSASLLSMGFYNKTDRKKINYIIKDF 280
               R+    +L+  GF +  +      ++K  
Sbjct: 300 GEYYRHPFVNALVEKGFKDAKNISSKTPVLKAV 332


>gi|197301728|ref|ZP_03166798.1| hypothetical protein RUMLAC_00454 [Ruminococcus lactaris ATCC
           29176]
 gi|197299168|gb|EDY33698.1| hypothetical protein RUMLAC_00454 [Ruminococcus lactaris ATCC
           29176]
          Length = 339

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 20/269 (7%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + ++  +      +   +       L + N   V           PAS TKLMTAY+   
Sbjct: 69  LCVSAENVALDGFTDEPSLHA--AGLFNLNERSVEYGYRLYDKLYPASTTKLMTAYLAL- 125

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
             K  K      +T S               G  + L + L  L++KS ND  VAIAE +
Sbjct: 126 --KYGKLEDMVTVTDSVTGFAIDEVVCGLYPGGQVKLYDLLCGLLLKSGNDCGVAIAEYI 183

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD--FPQYM 185
             + + F + MN  +K LG + THF+N HG+ +  HYTTA D+ ++      +  F + +
Sbjct: 184 SGSVEAFAELMNEEAKELGATGTHFVNPHGLHEDDHYTTAYDLYLIFNACIQNDTFKEII 243

Query: 186 HYFQIKG-------LEIKGKKYPNTNWAVGTFL-----GADGMKTGFTCASGFN-IVASA 232
                              +  P   +++G           G KTG T  +G   I+ S 
Sbjct: 244 SMSSYTMSIGDAAGNTHSLEVLPTNYYSLGKTEAPEGIKVFGGKTGTTDQAGCCVILYSE 303

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLS 261
                  I+VI+GA D+    +    LL 
Sbjct: 304 DMEAHPYISVIMGAEDKAFLYQEMNRLLE 332


>gi|145490104|ref|XP_001431053.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398155|emb|CAK63655.1| unnamed protein product [Paramecium tetraurelia]
          Length = 354

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 105/286 (36%), Gaps = 44/286 (15%)

Query: 24  ETNKLPYYTLLDTNTGHVIA--------ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  + +++ N G  +A                  ASLTKLMT YV    +++ K  
Sbjct: 66  PLVTAQNFIVMNGNDGQNLAVIQLNNQESFNSKKRVQIASLTKLMTCYVAIQLIRDLKIN 125

Query: 76  LTTPITISKNAS-------EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +   + +S +         +   +++  +    +TL + L  L++ S ND A  IAE+L 
Sbjct: 126 IYQIMYVSYDVYILTFKAVQISGTSAFLRAYDRITLYDLLHGLMLPSGNDAANVIAENLS 185

Query: 129 KTEKK-------------FVQHMNNTSKNLGLSATHFMNAHGVV--------QHGHYTTA 167
              K              F+  MN  +  L ++ T F N HG              Y+ A
Sbjct: 186 SFVKDPVSNIALQYRIQPFISLMNQYALLLDMNDTQFYNPHGKPTSIFSGLSNDQSYSCA 245

Query: 168 RDMAILSWRIKTD-------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
            D+A L  +I  D         +       +  ++    + NTN  +  F G  G KTGF
Sbjct: 246 EDLATLCKQIINDPLLMDIVNKKEHQATIQRNNKLIKLTWENTNK-MLEFEGYCGFKTGF 304

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           T  +G  +     +    +I +IL  L +  R   +  L +     
Sbjct: 305 TNKAGPCLATLFKKDSICIIIIILNCLSKEVRWDDTIKLSNWAQRK 350


>gi|315635519|ref|ZP_07890785.1| serine-type D-Ala-D-Ala carboxypeptidase [Arcobacter butzleri JV22]
 gi|315480277|gb|EFU70944.1| serine-type D-Ala-D-Ala carboxypeptidase [Arcobacter butzleri JV22]
          Length = 273

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 19/272 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+  L  + +     +    + A         L    + D     +I     +   +PAS
Sbjct: 5   MKFLLSALILIFTPIMAFSYTEANVFQKIEKDLDSIIVKDLTKKQLIFSKDANQQVSPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MTA +     K     + + +TI+ +  +  P+   FK G  + L + +   +++S
Sbjct: 65  LTKIMTAILAIESNK-----MDSVVTITADMKKVEPTILGFKVGEKIYLRDLVNAALIRS 119

Query: 116 ANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           AND A +IA       ++KFV  MN  +K LG++ T F N  G     H +TA D+  L+
Sbjct: 120 ANDAANSIAIYLGNGDKQKFVNMMNAKAKKLGMTKTTFQNPCGFDAKNHKSTASDLLKLT 179

Query: 175 WRIKTD-----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +       +   Y        +      +N          G+KTG+T  +G  ++
Sbjct: 180 EYAIKNSTFNEIVRKNSYSFKAINTKRTYTVYTSNKLQPKEKYMIGVKTGYTNQAGPCLI 239

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           A A +G + ++ V+L + +   R + +   L 
Sbjct: 240 ARAKEGKKDILLVMLNSHN---RWENTKLALD 268


>gi|288554201|ref|YP_003426136.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudofirmus OF4]
 gi|288545361|gb|ADC49244.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudofirmus OF4]
          Length = 547

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 22/260 (8%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           F+S +         +L++           +    PAS  K+MTA +           L+ 
Sbjct: 115 FVSFSIPIGAHAGAVLESGQDRPSFTKNANAALYPASTVKVMTALLAIEK-----GNLSD 169

Query: 79  PITISK--NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            + +        +  S +  + G  MTL+  L  L++ S ND AVAIAE +  +  +FVQ
Sbjct: 170 RVVVGPGAATVPFDSSKAGVRPGDVMTLEQLLHGLMLPSGNDAAVAIAEHIGGSHWQFVQ 229

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            MN  ++ LG + T FMNAHG       TT  D+A +     +  P+++           
Sbjct: 230 MMNQRARELGATNTTFMNAHGYDHPSQKTTVSDLAKIGA-EASKHPEFLKLISTPTYATT 288

Query: 197 GKK---------YPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            +          + NTN              G KTG+T  S  N+++ A  G  +   VI
Sbjct: 289 YRNRAGSPVHKVWRNTNQMLHNQAYRHSSIIGGKTGYTSVSRHNLISFAEAGGSTYTTVI 348

Query: 244 LGALDRNTRNKVSASLLSMG 263
           L    R  R   + ++LS  
Sbjct: 349 LRGE-RTQRYYDTTNMLSRA 367


>gi|238925374|ref|YP_002938891.1| putative D-alanyl-D-alanine carboxypeptidase precursor [Eubacterium
           rectale ATCC 33656]
 gi|238877050|gb|ACR76757.1| predicted D-alanyl-D-alanine carboxypeptidase precursor
           [Eubacterium rectale ATCC 33656]
          Length = 367

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 94/265 (35%), Gaps = 34/265 (12%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA--- 74
              +I +  +  Y  ++D   G V+A         PAS+TK+MT  V     ++      
Sbjct: 86  ATAAIGDELESSYAVVIDEQDGTVVAGKNAHEKMYPASMTKVMTVLVAAEQAEKNAIAAA 145

Query: 75  ---------------MLTTPITISKNASEYPPSNSTFKK----GSTMTLDNALKLLIVKS 115
                           L   +TI++ A++Y   +         G  + L +     I+ S
Sbjct: 146 ENENTEIDRQAVIENKLNEVVTITREATDYSYVHDCSTTGFLDGEQVPLRDVFNGTILPS 205

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL-SATHFMNAHGVVQHGHYTTARDMAILS 174
             + A  +A     + + FV  MN  +  LG+   THF N  G+    +Y+TA DMA++ 
Sbjct: 206 GGESAYQLAVYTAGSMEAFVDMMNQKAAELGIGQTTHFANPVGIYDENNYSTAYDMAVIM 265

Query: 175 WRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLG------ADGMKTGFTCAS 224
                D         H +         +    +N  +             G KTGF   S
Sbjct: 266 QAAMQDDICKTVLSNHTYSTAATPQHPENLNISNLFLRRIEDRMTSGEVIGAKTGFVNQS 325

Query: 225 GFNIVASAIQG-DQSLIAVILGALD 248
           G   V+       ++ I V  GA  
Sbjct: 326 GNCAVSYEKAASGKTYICVTAGASS 350


>gi|269929251|ref|YP_003321572.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sphaerobacter
           thermophilus DSM 20745]
 gi|269788608|gb|ACZ40750.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Sphaerobacter
           thermophilus DSM 20745]
          Length = 338

 Score = 94.7 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 94/253 (37%), Gaps = 14/253 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK-EKKAML 76
             +            L+      V+ E   D P  PAS  K++TA  V      E+   +
Sbjct: 74  AAIPPDLPLSARAAILVQDEPELVLFERNADEPLPPASTAKIVTALTVLRHAGLEEVLTV 133

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE---SLCKTEKK 133
                +   A  +    +         L   L      +A  ++  I E         ++
Sbjct: 134 QEEDLVDPVAESHMGLQAGDTVTVHDLLVGLLLPSGNDAAKTLSRVIGERLPGDQPPVER 193

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP------QYMHY 187
           F   MN  +  LG++ +HF++  G    G   TARDM I +  +  +             
Sbjct: 194 FAAAMNAVAAELGMTGSHFVDPSGDDAEGQVVTARDMVIAARALLREPVLVSIVAMQRAE 253

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +I G + +  +  NTN  +    G  G+KTG T  +G  ++ +      + IAVILG+ 
Sbjct: 254 VRIGGPKARVIRLENTNQLLAQ-DGVFGIKTGTTDQAGQCLLVAYRAPSGTQIAVILGSQ 312

Query: 248 DRNTRNKVSASLL 260
           D   R   + +LL
Sbjct: 313 D---RYGDARALL 322


>gi|291524841|emb|CBK90428.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale DSM 17629]
          Length = 301

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 101/262 (38%), Gaps = 27/262 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                      + +T  V+          PAS TK++TAY++          L   +T+S
Sbjct: 48  FAKTAEGAGAFNIDTHQVLYSQNLFEKLYPASTTKILTAYIILKNCD-----LNATVTVS 102

Query: 84  KN--ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            +     +  S    K+G  +T+ + L  L+++S ND A+A+AE    + ++F + MN+T
Sbjct: 103 HDAANPGHSSSVCGLKEGDVITVQDLLYGLLLESGNDAAIALAEYCSGSVEEFAKLMNST 162

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +K+ G + ++F+N  G+    HYTT  DM ++     +                      
Sbjct: 163 AKSFGATNSNFVNPSGLPDENHYTTIYDMYLIFSNAISLESFVAIISSQTHDVAYTNAQG 222

Query: 202 NTNWAVGTFLGADGMKTGFTCA-----------------SGFNIVASAIQGDQSLIAVIL 244
           +      TF    G  TG   A                     ++ S    ++ +I+++ 
Sbjct: 223 S--AVSKTFKNTCGYLTGAYTAPENVTVTGGKTGTTGEAGYCLVLLSQNAKNERIISIVY 280

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
            A  +         +LS GF N
Sbjct: 281 KADGKKDLYSFMNEILS-GFAN 301


>gi|291524311|emb|CBK89898.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale DSM 17629]
 gi|291527663|emb|CBK93249.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale M104/1]
          Length = 367

 Score = 94.3 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 92/265 (34%), Gaps = 34/265 (12%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA--- 74
              +I +  +  Y  ++D   G V+A         PAS+TK+MT  V     ++      
Sbjct: 86  ATAAIGDELESSYAVVIDEQDGTVVAGKNAHEKMYPASMTKVMTVLVAAEQAEKNAIAAA 145

Query: 75  ---------------MLTTPITISKNASEYPPSNSTFKK----GSTMTLDNALKLLIVKS 115
                           L   +TI++ A++Y   +         G  + L +     I+ S
Sbjct: 146 ENENTEIDRQAVIENKLNEVVTITREATDYSYVHDCSTTGFLDGEQVPLRDVFNGTILPS 205

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL-SATHFMNAHGVVQHGHYTTARDMAILS 174
             + A  +A     + + FV  MN  +  LG+   THF N  G+    +Y+TA DMA++ 
Sbjct: 206 GGESAYQLAVYTAGSMEAFVDMMNQKAAELGIGQTTHFANPVGIYDENNYSTAYDMAVIM 265

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYP------NTNWAVGTFLG----ADGMKTGFTCAS 224
                D                  ++P      N                G KTGF   S
Sbjct: 266 QAAMQDDICKTVLSNHTYSTAATPQHPENLNISNLFLRRIEDKMTSGEVIGAKTGFVNQS 325

Query: 225 GFNIVASAIQG-DQSLIAVILGALD 248
           G   V+       ++ I V  GA  
Sbjct: 326 GNCAVSYEKAASGKTYICVTAGASS 350


>gi|157736385|ref|YP_001489068.1| serine-type D-Ala-D-Ala carboxypeptidase [Arcobacter butzleri
           RM4018]
 gi|157698239|gb|ABV66399.1| serine-type D-Ala-D-Ala carboxypeptidase [Arcobacter butzleri
           RM4018]
          Length = 273

 Score = 94.3 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 19/272 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           M+  L  + +     +    + A         L    + D     +I     +   +PAS
Sbjct: 5   MKFLLSALILIFTPIMAFSYTEANVFQKIEKDLDSIIVKDLTKKQLIFSKDANQQVSPAS 64

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           LTK+MTA +     K     + + +TI+ +  +  P+   FK G  + L + +   +++S
Sbjct: 65  LTKIMTAILAIESNK-----MDSIVTITADMKKVEPTILGFKVGEKIYLRDLVNAALIRS 119

Query: 116 ANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           AND A +IA       ++KFV  MN  +K LG++ T F N  G     H +TA D+  L+
Sbjct: 120 ANDAANSIAIYLGNGDKQKFVNMMNAKAKKLGMTKTTFQNPCGFDAKNHKSTASDLLKLT 179

Query: 175 WRIKTD-----FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
                +       +   Y        +      +N          G+KTG+T  +G  ++
Sbjct: 180 EYAIKNSTFNAIVRKNSYSFKAINTKRTYTVYTSNKLQPKEKYMIGVKTGYTNQAGPCLI 239

Query: 230 ASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           A A +G + ++ V+L + +   R + +   L 
Sbjct: 240 ARAKEGKKDILLVMLNSHN---RWENTKLALD 268


>gi|213160841|ref|ZP_03346551.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 199

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 5/157 (3%)

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSL 239
            P     ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   L
Sbjct: 1   MPNEYAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVASATEGQMRL 60

Query: 240 IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEE 295
           I+ ++G      R   S  LL+ GF        +        +  +  N       + ++
Sbjct: 61  ISAVMGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTDRASLGVDKD 120

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           V  T       + +     +        +K  ++   
Sbjct: 121 VYLTIPRGRMKDLKASYVLNTAELHAPLQKNQVVGTI 157


>gi|289759031|ref|ZP_06518409.1| LOW QUALITY PROTEIN: D-alanyl-D-alanine carboxypeptidase dacB2
           [Mycobacterium tuberculosis T85]
 gi|289714595|gb|EFD78607.1| LOW QUALITY PROTEIN: D-alanyl-D-alanine carboxypeptidase dacB2
           [Mycobacterium tuberculosis T85]
          Length = 240

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 14/225 (6%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
            P  PAS  K++ A V           L + +      ++   +    K G + T    L
Sbjct: 12  WPIRPASTIKVLLALVALDE-----LDLNSTVVADVADTQAECNCVGVKPGRSYTARQLL 66

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--TT 166
             L++ S ND A  +A  +   +   V  MN  +  LG ++TH     G+   G    +T
Sbjct: 67  DGLLLVSGNDAANTLA-HMLGGQDVTVAKMNAKAATLGATSTHATTPSGLDGPGGSGAST 125

Query: 167 ARDMAILSWRIKTDF---PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           A D+ ++      +            +   +   +   N +  +  + GA G KTG+T A
Sbjct: 126 AHDLVVIFRAAMANPVFAQITAEPSAMFPSDNGEQLIVNQDELLQRYPGAIGGKTGYTNA 185

Query: 224 SGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFY 265
           +    V +A +G + L+  ++         T    +A+L   GF 
Sbjct: 186 ARKTFVGAAARGGRRLVIAMMYGLVKEGGPTYWDQAATLFDWGFA 230


>gi|238924099|ref|YP_002937615.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
 gi|238875774|gb|ACR75481.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
          Length = 301

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 100/262 (38%), Gaps = 27/262 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                      + +T  V+          PAS TK++TAY++          L   +T+S
Sbjct: 48  FAKTAEGAGAFNIDTHQVLYSQNLFEKLYPASTTKILTAYIILKNCD-----LNATVTVS 102

Query: 84  KN--ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            +     +  S    K+G  +T+ + L  L+++S ND A+A+AE    + ++F + MN+T
Sbjct: 103 HDAANPGHSSSVCGLKEGDVITVQDLLYGLLLESGNDAAIALAEYCSGSAEEFAKLMNST 162

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +K+ G + ++F+N  G+    HYTT  DM ++     +                      
Sbjct: 163 AKSFGATNSNFVNPSGLPDENHYTTIYDMYLIFSNAISLESFVAIISSQTHDAAYTNAQ- 221

Query: 202 NTNWAVGTFLGADGMKTGFTCA-----------------SGFNIVASAIQGDQSLIAVIL 244
                  TF    G  TG   A                     ++ S    ++ +I+++ 
Sbjct: 222 -GAAVSKTFKNTCGYLTGAYTAPENVTVTGGKTGTTGEAGHCLVLLSQNAKNERIISIVY 280

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
            A  +         +LS GF N
Sbjct: 281 KADGKKDLYSFMNEILS-GFAN 301


>gi|218670684|ref|ZP_03520355.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli GR56]
          Length = 152

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 57/152 (37%), Positives = 82/152 (53%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A+L+      +           +LD  TG ++A    D   +PASLTK+MT Y+ F  
Sbjct: 1   MAAVLTVTLAVSAPLAALAGNASLILDARTGKILAAENADTLNHPASLTKMMTLYLTFEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A A+AE+L 
Sbjct: 61  LKRGKIAWDTPIKMSKYAAARPPTKLGVKAGGTITVREAVYGMIVKSANDAAAAMAETLG 120

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +E  F + M   ++ LG+S T F+NA G+  
Sbjct: 121 GSESGFARMMTAKARQLGMSRTVFLNASGLPN 152


>gi|291528982|emb|CBK94568.1| D-alanyl-D-alanine carboxypeptidase [Eubacterium rectale M104/1]
          Length = 301

 Score = 93.9 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 99/262 (37%), Gaps = 27/262 (10%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                      + +T  V+          PAS TK++TAY++          L   +T+S
Sbjct: 48  FAKTAEGAGAFNIDTHQVLYSQNLFEKLYPASTTKILTAYIILKNCD-----LNATVTVS 102

Query: 84  KN--ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNT 141
            +     +  S    K+G  +T+ + L  L+++S ND A+A+AE    + ++F + MN+T
Sbjct: 103 HDAANPGHSSSVCGLKEGDVITVQDLLYGLLLESGNDAAIALAEYCSGSVEEFAKLMNST 162

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +K+ G + + F+N  G+    HYTT  DM ++     +                      
Sbjct: 163 AKSFGATNSSFVNPSGLPDENHYTTIYDMYLIFSNAISLESFVAIISSQTHDAAYTNAQ- 221

Query: 202 NTNWAVGTFLGADGMKTGFTCA-----------------SGFNIVASAIQGDQSLIAVIL 244
                  TF    G  TG   A                     ++ S    ++ +I+++ 
Sbjct: 222 -GAAVSKTFKNTCGYLTGAYTAPENVTVTGGKTGTTGEAGHCLVLLSQNAKNERIISIVY 280

Query: 245 GALDRNTRNKVSASLLSMGFYN 266
            A  +         +LS GF N
Sbjct: 281 KADGKKDLYSFMNEILS-GFAN 301


>gi|309774606|ref|ZP_07669631.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308917637|gb|EFP63352.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 336

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 12/238 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                Y  ++D     V+ E   D    PASLTK++TA V     ++    +T      K
Sbjct: 66  KLNSRYAMVIDLKDQQVLYEKNSDKKLFPASLTKVLTAIVALDNAEDLHKKITITDKDIK 125

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +E   S +    G  +T+++ L  LI+ S  D A A+A  L  +   FV+ MN+ +  
Sbjct: 126 GLAEANASVAGLAVGEQVTIEDLLYALILPSGADGANALANHLNGSVPNFVKDMNSKADG 185

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL---EIKGKKYP 201
           +G++ THF N  G+    HYTT +DM  +      +         ++       +  K  
Sbjct: 186 MGMTHTHFTNTTGLHDKQHYTTLQDMKKMMDHAWKNPAFRKVMTTLRYSLPATKQHPKGL 245

Query: 202 NTNWAVGTFLG--------ADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRN 250
             N  +  +            G K+G+T  +G+ +++ A ++   S + +   A   +
Sbjct: 246 KLNSTLLFYDNDLKFDGGRIIGGKSGYTPEAGYCLISVAEMKDGHSYMMISAKADKTD 303


>gi|116334395|ref|YP_795922.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
 gi|116099742|gb|ABJ64891.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
          Length = 307

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 28/254 (11%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN--- 93
           +TG V+     +     AS++K+MT Y+  + +  K++     + I+         +   
Sbjct: 51  DTGKVVWSKAGNTARPIASVSKIMTLYLTLAKVNGKQSNWNHKVKITSRGLVSMSRSAAC 110

Query: 94  --STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
               FK G   T+        + S+N+ A+A+ + +  +  KF++ MN  +K   L   H
Sbjct: 111 GGFKFKLGHKYTVKQLYDAAFLDSSNNAAIALGQWVSGSNAKFIKKMNAQAKAWKLGKAH 170

Query: 152 FMNAHGVVQHG-------------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           F++A G+                 +  +A+D+A+++  + TD+P+ +   Q    ++ G+
Sbjct: 171 FVSASGLENSDLQYYGYRYGTANANMVSAKDVALIARHLITDYPRVLTDGQAGSKKVDGQ 230

Query: 199 KYPNTN------WAVGTFLGADGMKTGFTCASGFNIVASAIQGD-QSLIAVILGALDRNT 251
              N N            L  DG+KTG+T  +G+  V +        +I V+L   D   
Sbjct: 231 LCYNYNNLLAGRKYYQASLNVDGLKTGYTPLAGYCFVGTGQMAGKHRIITVVLHDEDE-- 288

Query: 252 RNKVSASLLSMGFY 265
               + SL++  + 
Sbjct: 289 -FTETRSLMNYAYQ 301


>gi|118594052|ref|ZP_01551399.1| probable D-alanyl-D-alanine carboxypeptidase [Methylophilales
           bacterium HTCC2181]
 gi|118439830|gb|EAV46457.1| probable D-alanyl-D-alanine carboxypeptidase [Methylophilales
           bacterium HTCC2181]
          Length = 256

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 12/251 (4%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY- 89
             ++  +T  VI +       + ASLTKLMTA V+          L   + ISK   +  
Sbjct: 2   AMVVSQHTDEVIYQKKAYTKTSIASLTKLMTAMVIIDSG----LDLKEKVVISKEDIDRL 57

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             + S    G+ +T    L + ++ S N  A A++ S    +K FV+ MN  +  LG+  
Sbjct: 58  KWTGSRLTFGTKLTRLELLSVALMASDNRAASALSRSYPAGKKAFVRAMNIKALQLGMHN 117

Query: 150 THFMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           + F +  G+    + +TARD+  +      + +  D     +     G   K   + NTN
Sbjct: 118 SFFADPTGL-DKRNISTARDLVRMTKAAYQYPLIRDLSTNPNGNVKVGKRKKSIGFSNTN 176

Query: 205 WAVGTFLGADG-MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
             V       G  KTGF   +G  +V   +  ++ +I V+L +  + TR   +  + +  
Sbjct: 177 SLVRKGQWDIGLSKTGFIREAGRCLVMQTVINNEPVIIVLLDSFGKYTRVADAKRIKTWM 236

Query: 264 FYNKTDRKKIN 274
              K   K  N
Sbjct: 237 EKEKKINKVTN 247


>gi|229006378|ref|ZP_04164057.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus mycoides Rock1-4]
 gi|228754877|gb|EEM04243.1| D-Ala-D-Ala carboxypeptidase DacF; Serine peptidase; MEROPS family
           S11 [Bacillus mycoides Rock1-4]
          Length = 201

 Score = 93.5 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 4/183 (2%)

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           +TK+MT  ++   +++ K  L   +  S++A+    S    + G  MT++  LK + + S
Sbjct: 1   MTKIMTMLLIMEQVEKGKLKLEDKVRASEHAASMGGSQIFLEPGEEMTVNEMLKGIAIAS 60

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-- 173
            ND +VA+AE +  +E+ FV  MN  +K+LGL  THF N  G+    HY+TA DM+I+  
Sbjct: 61  GNDASVAVAEHIAGSEEGFVNMMNKKAKDLGLKNTHFQNPTGLPAKDHYSTAYDMSIMAK 120

Query: 174 --SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
                         +   ++    K     NTN  V  + G DG+KTGFT  + + + AS
Sbjct: 121 ELMKYPLIRKYTGKYEDYLRENTEKKFWLVNTNKLVRFYPGVDGVKTGFTTEAKYCLTAS 180

Query: 232 AIQ 234
           A +
Sbjct: 181 AEK 183


>gi|313631512|gb|EFR98800.1| D-alanyl-D-alanine carboxypeptidase DacA [Listeria seeligeri FSL
           N1-067]
          Length = 305

 Score = 93.5 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 38/237 (16%)

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGV-------------VQHGHYTTARDMAILSWRIK 178
           K+FV  MN  ++ L L    F+NA G+              +  +  TAR MA L+  + 
Sbjct: 7   KEFVAMMNKKAEELKLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTARGMAKLAKHLI 66

Query: 179 TDFPQYMHYFQIKGLEIKGKK-----YPNTNWA----VGTFLGADGMKTGFTCASGFNIV 229
            D+P+ +        E +          N NW     +    G DG+KTG T  +G  + 
Sbjct: 67  NDYPEVLKTASTTKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTGTTDYAGMCLT 126

Query: 230 ASAIQGDQSLIAVILGALD------RNTRNKVSASLLSMGFYNKTDRKKINYIIK----- 278
           A+A+Q    +I V+L A         + R   +  +L   F N   ++      K     
Sbjct: 127 ATAVQDGMRVITVVLHANGGGEGEHTSARFDETNKMLDYSFNNFKVKEVQKAGAKVKDPS 186

Query: 279 ----DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKN 331
               D  ++     V     ++    K         K     ++     +K T +  
Sbjct: 187 TIAVDKGKEETVGLVTKDEVKLVVP-KNGNEPKLTTKVTLKDKTLEAPVKKNTEVGE 242


>gi|166031844|ref|ZP_02234673.1| hypothetical protein DORFOR_01545 [Dorea formicigenerans ATCC
           27755]
 gi|166028297|gb|EDR47054.1| hypothetical protein DORFOR_01545 [Dorea formicigenerans ATCC
           27755]
          Length = 367

 Score = 93.1 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 102/267 (38%), Gaps = 25/267 (9%)

Query: 15  NIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                  +    +  +   L D N               PAS TK++TA V         
Sbjct: 104 ASAAGNPLGFEPESVHAVGLFDVNNAETDCAYNIHKKIYPASTTKILTALVALEN----- 158

Query: 74  AMLTTPITISKN----ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             L+  +T++                 K G  +TL++ L  L++ S ND AVAIA+ +  
Sbjct: 159 GNLSDTVTVADEADSGKFAADEQTCGIKAGDQLTLEDLLNGLLLYSGNDNAVAIADHIAG 218

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI--------KTDF 181
           + +KF + MN  +K L  + +HF+N  G+    HYTTA D+ ++              + 
Sbjct: 219 STEKFAEMMNAEAKKLMATNSHFVNPSGLHDDNHYTTAYDLYLIFNECIKHDDFVKIINS 278

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTGFTCASGFNIVASA-IQ 234
             Y  +        +  K+  TN+           +   G KTG T  +G  ++      
Sbjct: 279 SSYTAHITGADGTKRDVKWEPTNYYAKGEATPPDNVTIIGGKTGTTKGAGNCLILLTKDS 338

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLS 261
                I++I+GA  +    +   S+LS
Sbjct: 339 SGNPYISIIMGAGSKPLLYQDMTSMLS 365


>gi|116334394|ref|YP_795921.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
 gi|116099741|gb|ABJ64890.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus brevis ATCC 367]
          Length = 392

 Score = 93.1 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 105/263 (39%), Gaps = 28/263 (10%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                 LD  TG  +     +     AS++KLMT Y+V   +          +  S    
Sbjct: 127 AKNAIALDYTTGKAVWSKSANTVRPIASVSKLMTLYLVLKKVDGSATKWNQVVDTSSKGL 186

Query: 88  EYPPSNSTF-----KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                +S       K G   T+       ++ S+N+ A+A+ + +  +  KF++ MN  +
Sbjct: 187 IAMGKSSACGGFLFKTGHKYTVKELYDAALLDSSNNAAIALGKWVAGSNAKFIKQMNAQA 246

Query: 143 KNLGLSATHFMNAHGVVQHG-------------HYTTARDMAILSWRIKTDFPQYMHYFQ 189
           K+  L    F++A G+                 +  +A+D+A+++  +  D+P+ +    
Sbjct: 247 KSWNLGKASFVSASGLENDDLKAFGYAYGSKNANMVSAKDVALIARHLIKDYPRILTDGA 306

Query: 190 IKGLEIKGKKYPNTNWAVGTFLG------ADGMKTGFTCASGFNIVASAIQGD-QSLIAV 242
           +    + G+   N N  +            DG+KTG+T  +G+  V +  +     +I V
Sbjct: 307 VGSKNVDGQLCYNYNNLLKGRKYYQSSLKVDGLKTGYTPLAGYCFVGTGQKSGKHRVITV 366

Query: 243 ILGALDRNTRNKVSASLLSMGFY 265
           +L  ++       + SL++  + 
Sbjct: 367 VLHDINE---FTETRSLMNHAYT 386


>gi|238917380|ref|YP_002930897.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Eubacterium eligens ATCC 27750]
 gi|238872740|gb|ACR72450.1| D-alanyl-D-alanine carboxypeptidase (penicillin binding protein
           5/6) [Eubacterium eligens ATCC 27750]
          Length = 370

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 87/242 (35%), Gaps = 11/242 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           L+       PY  LLD +   +IA    D    PAS+TK+MT  VV   + +     T  
Sbjct: 101 LTSESKVSSPYAALLDVDNHKIIAGKQADTRMYPASMTKVMTLIVVTDNIDKIPQTYTFG 160

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
             +         S + F  G T+ +++ L  LI+ S  D A A+A  +  + ++F + MN
Sbjct: 161 FEMLNRLFREEASVAGFLDGETVDVEDLLYGLILPSGADAAEALAIMVAGSNEEFAKLMN 220

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ-------YMHYFQIKG 192
                LGL  T F N  G+     YTT  +MA++      D  +                
Sbjct: 221 AKCNELGLKHTRFANPTGLYDEEQYTTPAEMAMIMEYAMRDELRAKVLGTYQYKTKATAQ 280

Query: 193 LEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                +        +           G KTGF   +G  +V+ A+           G   
Sbjct: 281 HPDGIQLTSTMYSRIYGNEAPGVIVKGGKTGFISQAGSCLVSYAVTNKGHAYVFCTGGAT 340

Query: 249 RN 250
             
Sbjct: 341 YK 342


>gi|332522713|ref|ZP_08398965.1| putative phage DNA packaging protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313977|gb|EGJ26962.1| putative phage DNA packaging protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 396

 Score = 92.7 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 116/317 (36%), Gaps = 52/317 (16%)

Query: 1   MRQFLVIIAMAMLSNIF-----------------PFLSIAETNKLPYYTLLDTNTGHVIA 43
           +++++  + +     +                      +   NK     ++D + G ++ 
Sbjct: 2   LKKYVFSVFLIFTFFVSHLVQADEHNDILNITREAGYQVNPINKPKSSIVVDASNGDILW 61

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-----EYPPSNSTFKK 98
           ++      +PAS++K+ T Y++F  L + K  L T IT S             +N     
Sbjct: 62  QDNALTVRDPASMSKVFTLYLLFEDLAKGKLTLDTKITASDTDQAISEIYEISNNKIVAG 121

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG- 157
                 D    + +  S     +            ++  +N+T+K LG+  THF NA G 
Sbjct: 122 VEYPIRDLITMIAVPSSNAATVMVANYLSQNDASAYLDRINSTAKRLGMLDTHFSNAGGA 181

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
                              + T+A D+AIL +     +P  ++Y     ++         
Sbjct: 182 VAEAFNGYYNPKNYDKSAPNLTSAHDLAILVYHFLKKYPDILNYTNTSTVKTMIGTPYEE 241

Query: 204 NWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            +    +          G DG+KTG + ++ FN + +A +G   +I +++G  D +    
Sbjct: 242 TFHSYNYSLPGDKYGIKGVDGLKTGSSPSAAFNAMVTAKRGKARVITIVMGVGDWSDQDG 301

Query: 252 ---RNKVSASLLSMGFY 265
              R+  + +L   GF 
Sbjct: 302 EFYRHPFANALTEHGFK 318


>gi|264676435|ref|YP_003276341.1| peptidase S11, D-alanyl-D-alanine [Comamonas testosteroni CNB-2]
 gi|262206947|gb|ACY31045.1| peptidase S11, D-alanyl-D-alanine [Comamonas testosteroni CNB-2]
          Length = 165

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 71/138 (51%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              +        Y L+D   G V+     D P   ASLTKLM+AYVVF  L+ KK  L  
Sbjct: 27  AAPVPPEIAARNYLLVDVTAGQVLGAKDVDAPVEQASLTKLMSAYVVFDALRSKKITLEQ 86

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            + +S+ A + P S         + +++ L  +I++S ND  +A+AE++  T + FV+ M
Sbjct: 87  RMPVSERAWKMPGSRMFIDPKMQVPVNDLLSGMIIQSGNDATMALAEAVGGTAENFVKMM 146

Query: 139 NNTSKNLGLSATHFMNAH 156
           N+ +K LG+  T + N  
Sbjct: 147 NDQAKALGMKNTSYKNPK 164


>gi|303234621|ref|ZP_07321255.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           BVS033A4]
 gi|302494284|gb|EFL54056.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           BVS033A4]
          Length = 289

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 108/265 (40%), Gaps = 20/265 (7%)

Query: 1   MRQFLVIIAMAMLSN---------IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L I+ + +L                    +       +   +    I    PD   
Sbjct: 1   MKKKLEIVGITLLVVVGLCFIFKIANANKFDKLSFNADCIYVYSIDDEKEIFSKNPDKKV 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PASLTK+MT Y     +++            +   +   S + F      T ++ L   
Sbjct: 61  YPASLTKMMTVYTALGKIEDFDKKAPIDKKSYQKLVKQNASMAGFYGNEPTTFEDLLYGT 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SA + A ++A ++  +++KFV  MN  +KN+GL+ T+F N+ G+ +  HY++A+DMA
Sbjct: 121 MLASAGECADSLAINVSGSKEKFVDLMNENAKNMGLNNTNFKNSEGMDEDDHYSSAKDMA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-----------ADGMKTGF 220
            L      +   Y  +   K    K   +P       T LG             G K+G 
Sbjct: 181 FLLKNSLKNEKFYKIFTTDKYTSTKTLDHPKGIEIESTVLGRLKEYEQDGFKIIGGKSGT 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILG 245
           T  +G  +   + + ++  I +++G
Sbjct: 241 TEKAGLCLATLSEKNNKKYIIIVMG 265


>gi|218512347|ref|ZP_03509187.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli 8C-3]
          Length = 221

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 4/215 (1%)

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            +K + ++ AND  + +AE +  +E++F Q M   ++ LG+    F N+ G+       T
Sbjct: 1   MIKGVAIQGANDSCIILAEGMAGSEQQFAQSMTRRARELGMEKAVFGNSTGLPDGKSKVT 60

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           AR+M  L+  ++  +P    YF     E       N N  +G  LGADG+ TGF    G+
Sbjct: 61  AREMVTLATTLQQSYPNLYPYFAQLDFEWNKIFQRNRNPLLGLDLGADGLATGFADGEGY 120

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
           +IVAS  +  + L   + G      R + +  +L  G      R+              +
Sbjct: 121 SIVASVQRDGRRLFLALAGIASDKERTEEAKRVLEWGLTAFESRQIFTE----HEVIGAA 176

Query: 287 NEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
           +     +  V    K  ++    +       +  +
Sbjct: 177 SVYGGSARTVDLVAKAPVSVYIPISNPDRLSARIV 211


>gi|268608716|ref|ZP_06142443.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus flavefaciens
           FD-1]
          Length = 482

 Score = 92.7 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 102/248 (41%), Gaps = 28/248 (11%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN--S 94
           + G ++  +  +    PASLTKL+TA V             T +T+    +     +   
Sbjct: 111 DDGELLYYDNINEHIAPASLTKLLTASVAL-----HYLSPDTVVTVGSEQNLVRSGSSLC 165

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAV------------AIAESLCKTEKKFVQHMNNTS 142
             + G  + L + L  +++ S ND A               A +  +    F + MN+ +
Sbjct: 166 LIRPGHKLKLYDLLTGMLMASGNDAAYTVAVTTARAVKPDTAMTDAQAVSYFTELMNSYA 225

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK----TDFPQYMHYFQIKGLEIKGK 198
            ++G+  +HF    G      YTT  D+ +L+               +  ++  +  +  
Sbjct: 226 SSIGMRDSHFTTPEGWDDASQYTTVSDLLVLANHAFSIPEIKTITGTYQKKVYFVSGENI 285

Query: 199 KYPNTNWAVGTFL-----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
            + NTN  +          A G+KTG T ++G  ++A+  +  ++ ++V++G    N R 
Sbjct: 286 TWTNTNALLDPNSAYYCADAIGIKTGTTASAGNCLIAAFERNGKTYLSVVVGCGTGNDRY 345

Query: 254 KVSASLLS 261
           +++  +LS
Sbjct: 346 ELTLKMLS 353


>gi|154502813|ref|ZP_02039873.1| hypothetical protein RUMGNA_00627 [Ruminococcus gnavus ATCC 29149]
 gi|153796696|gb|EDN79116.1| hypothetical protein RUMGNA_00627 [Ruminococcus gnavus ATCC 29149]
          Length = 313

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 27/233 (11%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + + NTG ++ +      W PAS+TKLMT  + +  +K     L +   +++  ++   
Sbjct: 71  IITEINTGQILWQENAQKQWPPASMTKLMTILLAYEEIKAGNLELESTAEVNERYTDIAG 130

Query: 92  S----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                N+  + G++ T+   + L+IV S+      +A+ +     +FV+ MN  ++ LG+
Sbjct: 131 RYALSNNKMQPGASYTVAELMDLIIVPSSAAATYMLADMVESDPDRFVERMNQKAQELGM 190

Query: 148 SATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
             T + N  GV                  + TT  D A+L   +   +P  +++ +   +
Sbjct: 191 VNTKYFNCVGVTNNLLQPYHPVSQPLDGDNITTPEDYAMLCTYLIKTYPDILNHTKYPQI 250

Query: 194 EIKGKKYPNTNWAVGTF---------LGADGMKTGFTCASGFNIVASAIQGDQ 237
            +K       ++               G DG+KTG +  +GF +      G  
Sbjct: 251 TVKEGTPYEEHFTSYQISLEGAKYGLEGTDGLKTGSSDTAGFKLFVHCKTGGH 303


>gi|166240883|ref|ZP_02240755.1| D-alanyl-D-alanine carboxypeptidase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 146

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 10/135 (7%)

Query: 2   RQFLVIIAMAML----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
           R+  V++A+ ML          S      +     +     L++ NTG V+ EN  D   
Sbjct: 9   RKLSVVLAVCMLQLFGMHLFVSSAAAADANAIPDLQAKSAILMEANTGQVLYENNADTLL 68

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PAS++K+MT Y++   +K+ K      + +SK A+    S     +G  +++ +    +
Sbjct: 69  PPASMSKMMTEYLIMEAIKDGKIKWEDKVPVSKQAASAIGSGQLLAEGEQLSVKDMFYAI 128

Query: 112 IVKSANDIAVAIAES 126
            + S+ND +VA+AE 
Sbjct: 129 SIYSSNDASVAMAEY 143


>gi|319947348|ref|ZP_08021581.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
           ATCC 700641]
 gi|319746590|gb|EFV98850.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus australis
           ATCC 700641]
          Length = 429

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 69/343 (20%), Positives = 142/343 (41%), Gaps = 40/343 (11%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            M        S+ E  +     ++D +TG ++  +  D P +  S+ KLM+ YV+   ++
Sbjct: 33  IMSITEKSGTSVDEFFRPKADIVVDAHTGAIVYGDNIDAPRDSGSMAKLMSVYVLLKAIQ 92

Query: 71  EKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
           E +    T IT ++           SNS    G+   +   L ++ V S++   + IA  
Sbjct: 93  EGQLDYDTQITATETDVAISQNQKLSNSPIVAGAKYKVSTLLNMIFVPSSSAATIMIANK 152

Query: 127 LC-KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV---------------QHGHYTTARDM 170
           +      KF+  MN  ++ +G++ T + N +G                    + TTARDM
Sbjct: 153 VSGGDPDKFLDLMNQRAQEIGMTNTKWNNPNGAPTAVLDGYYNPTRYDQHAINQTTARDM 212

Query: 171 AILSWRIKTDFPQYMHYFQIKGL-----EIKGKKYPNTNWA----VGTFLGADGMKTGFT 221
           AIL++ +  +FP+ ++Y +   +         + + N N++      +  GADG+KTG +
Sbjct: 213 AILAYHMVNEFPEILNYTKNAKITLFEGTDYEETHENYNYSLEGGRYSLKGADGLKTGSS 272

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFYNKTDRKKINY 275
             + +N   +  +G+Q  + VI+G    +       R+ +  +L+   + +   ++ +  
Sbjct: 273 PTADYNYTLTVNRGNQRFVQVIMGVGHYDVEIAESLRHVIGNALIERLYQDYEYKEVLPA 332

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
                  Q    + P        T K   N    ++  + + +
Sbjct: 333 GDHTIQGQTYHLDKP-----FYATVKRGTNPEISVQNGQLQIA 370


>gi|90413839|ref|ZP_01221826.1| Hypothetical D-alanyl-D-alanine endopeptidase [Photobacterium
           profundum 3TCK]
 gi|90325150|gb|EAS41653.1| Hypothetical D-alanyl-D-alanine endopeptidase [Photobacterium
           profundum 3TCK]
          Length = 298

 Score = 92.3 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 95/274 (34%), Gaps = 17/274 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R  L I ++  +S      +                  + D  +G  + +   +     A
Sbjct: 3   RALLFIFSLVSVSIATSAHATTAKLDPNNIQTASVSTYVTDLKSGKTLYKKNQNVVMPLA 62

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           S+TKLMTA V        K  L   IT    +        +  +  S ++    + + ++
Sbjct: 63  SITKLMTAMVTLDA----KLPLDEKITFKPIDKKRMYNGYTRIRMESRLSRGETIHIALM 118

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            S N  A A+A +       F++ MN  +K LG++ T F+++ G+      T +    + 
Sbjct: 119 SSENLAAAALAGNYPGGYDAFIKAMNAKAKALGMTNTRFVDSSGLNPKNVSTASDINKMA 178

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCASGFNI 228
               K    +      +  +     K    Y NTN          +  KTG+   +G  +
Sbjct: 179 KAAYKYAKIRKYSTTPVHTVYFTKPKYKLGYTNTNVLARGKKWDVEMTKTGYLDIAGHCL 238

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
                   + ++ V+L A  + T    +  +   
Sbjct: 239 TMITKIDGKEILMVMLDAQGKLTPIGDAGRIKKW 272


>gi|257438479|ref|ZP_05614234.1| penicillin-binding protein 5 domain protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257199058|gb|EEU97342.1| penicillin-binding protein 5 domain protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 446

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/373 (11%), Positives = 110/373 (29%), Gaps = 38/373 (10%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++   +++++A+L +     + A          K     +++T+T  ++ E   +   +
Sbjct: 1   MKRIFALLLSLAVLFSCLAVTAGAMFDPSTVYDVKAQSAYIVNTDTNIIVYEKDSEKQVS 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
              LTK MT  +V +   ++     T      +      +       +    +    ++ 
Sbjct: 61  AGGLTKYMTIALVLTNYADQLDSTFTMPFAISDYVHNSDNADMRSGETFTYREALYAMVT 120

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
             +         E        +V  MN  S+ +G + + + +A G+      T      I
Sbjct: 121 RNANEAAMGLAHELSGGDLAGWVSQMNTLSQRIGTTNSTWTDACGLDSGNTTTAVDMYLI 180

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYP-----------NTNWAVGTFLGADGMKTGFT 221
           L + +  D  + +       +  K K              N       +  A        
Sbjct: 181 LRYLMSFDAFKEISAAPTFTMPAKEKHAKSFVLLSQNVALNKTSGGRFYRSAMQGGMCDV 240

Query: 222 CAS-----GFNIVASAIQGDQSLIAVILGALDRNTRN---------KVSASLLSMGFYNK 267
            A        + V+ A +   + I  I+ + D                +  L+   F + 
Sbjct: 241 MAYKNDSGDQSYVSWANKDGATYIFCIMQSPDTCDDYGYSNRRPALYETTKLIDWVFESF 300

Query: 268 TDRKKINYIIKDFYQQNLSNEVPNI-----SEEVCTTQKEIINYNTQMKEAKDKESHFID 322
           + +  ++            +   +      ++ + T      + +   K     +     
Sbjct: 301 SIQAALDTDQALAEIPVKYSSDTDTLQLYPADSMMTLLPSTGDGSVTQKYFHLPDYATAP 360

Query: 323 FEKITLLKNKITK 335
            ++  ++     K
Sbjct: 361 IQQGDVVGTVELK 373


>gi|28895131|ref|NP_801481.1| D,D-carboxypeptidase, penicillin-binding protein [Streptococcus
           pyogenes SSI-1]
 gi|28810376|dbj|BAC63314.1| putative D,D-carboxypeptidase, penicillin-binding protein
           [Streptococcus pyogenes SSI-1]
          Length = 374

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 73/310 (23%), Positives = 128/310 (41%), Gaps = 36/310 (11%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +++E N+     ++D N+  ++ ++  D P +PAS++K+ T Y++F  L + K  + 
Sbjct: 14  AGYTVSEVNRPKSSIVVDANSSDILWQDNIDIPRDPASMSKMFTLYILFEELAKGKITMD 73

Query: 78  TPITISKNAS----EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEK 132
           T IT +         Y  SN+    G    + + + L  V S+N   V IA         
Sbjct: 74  TTITATPTDQAIANIYEISNNNIVAGVAYPIRDLITLTAVPSSNAATVMIANYLSNNDAS 133

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQH---------------GHYTTARDMAILSWRI 177
            F+  +N T+K LG++ THF NA G                    + TTARD++ L +  
Sbjct: 134 AFIDRINATAKQLGMTNTHFSNASGAAAQAFQGYYNPTKYDLSASNITTARDLSKLLYAF 193

Query: 178 KTDFPQ-----YMHYFQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFNI 228
              +P+                   +++   N           G DG+KTG + ++ FN 
Sbjct: 194 LKKYPEIISFTNKSVVHTMVGTPYEEEFHTYNHSLPDNQFGMKGVDGLKTGSSPSAAFNA 253

Query: 229 VASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGFY-NKTDRKKINYIIKDFY 281
           + +A +G   LI +++G  D +       R+    +L   GF  +KT  KK    ++   
Sbjct: 254 MITAKRGKTRLITIVMGVGDWSDQNGEFYRHPFVNALTEKGFKDSKTLSKKARQKLEKLV 313

Query: 282 QQNLSNEVPN 291
            Q      P 
Sbjct: 314 PQTKKETSPK 323


>gi|297193840|ref|ZP_06911238.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297151973|gb|EDY65162.2| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 454

 Score = 92.0 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 8/229 (3%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS----TFK 97
           + +     P   AS+ K MTAYV+          +   IT+ K A E   + S      K
Sbjct: 117 LGQYGAQKPAPIASVAKTMTAYVILRDHPITGKQVGPKITVDKKAEEESKAKSESTAPIK 176

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           +G   T    L+LL++ S N+ A  +A     +E+ FV+ MN+ +K+LG++ + + +  G
Sbjct: 177 EGQQFTEKQMLQLLMIPSGNNAARLLARWDAGSEEAFVKKMNDAAKDLGMTNSTYTDPSG 236

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           +      T    + +    ++ D  + +       +     K  N N       G  G+K
Sbjct: 237 LKATTVSTPLDQIKLGKAVMENDVFREIVNTTRIEIPGIDGKIRNNNDRALLMDGVGGIK 296

Query: 218 TGFTCASGFNIVASAI--QGD--QSLIAVILGALDRNTRNKVSASLLSM 262
           TG +  +G N++ SA        + ++ +++GA D     +     +  
Sbjct: 297 TGSSTPAGGNLLWSANAVVDGEVRRIVGIVMGAQDAPALWQKLEKAIDY 345


>gi|295094878|emb|CBK83969.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus sp. ART55/1]
          Length = 172

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 62/123 (50%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +     + P   L++ +TG V+ E   D    PAS+TK+MT  + F  ++  + 
Sbjct: 48  TQAADQTEVLEVESPSCILVEASTGQVLFEKNCDEAMAPASVTKVMTLLLAFEAIEAGQM 107

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            L   +T+S++A+    S   F+ G   T+++ +K +I+ S ND AVA+AE  C+  +  
Sbjct: 108 TLDDIVTVSEHAASMGGSQCFFEAGEEQTVEDMIKCIIIASGNDAAVAMAEKGCRKRRSV 167

Query: 135 VQH 137
            + 
Sbjct: 168 CEK 170


>gi|302380445|ref|ZP_07268913.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311756|gb|EFK93769.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ACS-171-V-Col3]
          Length = 289

 Score = 91.6 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 20/265 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN---------KLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L I+ + +L  +   +     N               +   +    I    PD   
Sbjct: 1   MKKKLEIVGITLLVVVGLCIIFKIANENKFDKLSFNADCIYVYSIDDEKEIFSKNPDKKV 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PASLTK+MT Y     +++            +   +   S + F      T ++ L   
Sbjct: 61  YPASLTKMMTVYTALGKIEDFDKKAPIDKKSYQKLVKQNASMAGFYGNEPTTFEDLLYGT 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SA + A ++A ++  +++KFV  MN  +KN+GL+ T+F N+ G+ +  HY++A+DMA
Sbjct: 121 MLASAGECADSLAINVSGSKEKFVDLMNENAKNMGLNNTNFKNSEGMDEDDHYSSAKDMA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-----------ADGMKTGF 220
            L      +   Y  +   K    K   +P       T LG             G K+G 
Sbjct: 181 FLLKNSLKNEKFYKIFTTDKYTSTKTLDHPKGIEIESTVLGRLKEYEQDGFKIIGGKSGT 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILG 245
           T  +G  +   + + ++  I +++G
Sbjct: 241 TEKAGLCLATLSEKNNKKYIIIVMG 265


>gi|229091483|ref|ZP_04222693.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-42]
 gi|228691857|gb|EEL45604.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family S11
           [Bacillus cereus Rock3-42]
          Length = 196

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 7/133 (5%)

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
            + G DG+KTG T  +G     +A +    LI+V++ A     R   +  L   GF N  
Sbjct: 8   QYEGVDGLKTGTTPEAGDCFTGTAERNGMRLISVVIKANSHAARFDETKKLYDYGFANFE 67

Query: 269 DRKKINYIIKD-------FYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFI 321
            +K                      + V    + V     +      + +     +    
Sbjct: 68  MKKVYGKDSVVNGHETVRVANAKDKDVVVQTKQAVSLPIPKSNKDVYKKEFKVLNKEQEA 127

Query: 322 DFEKITLLKNKIT 334
             +K   +   I 
Sbjct: 128 PIKKGVTISKMII 140


>gi|146181846|ref|XP_001023475.2| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|146144034|gb|EAS03230.2| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 564

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 105/305 (34%), Gaps = 57/305 (18%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +         + L D ++G  I      +    ASLTK+MT Y V  F ++        
Sbjct: 258 TAFPPQVTAKAWALFDGSSGKFIDGKCVHNQREVASLTKIMTCYTVIEFFEQILQKDMKR 317

Query: 80  IT--ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL---------- 127
           +   +S  AS+   +++  K    +++ + L  L++ S ND AV +AE++          
Sbjct: 318 VFVRVSSRASQTNGTSARLKYNMIISIWDLLYGLMLPSGNDSAVCLAENVGSLMYLYYVK 377

Query: 128 ---------------------------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
                                          ++F+  MN  + N  L  T++ N HG+  
Sbjct: 378 QDNEILQDEFIYDEQLLHKKLELDSTPNTGMQRFLVQMNINAVNFELINTNYSNPHGLKN 437

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE-----------IKGKKYPNTNWAVGT 209
             + ++A D+A +S         +      K               +   +   N     
Sbjct: 438 PLNKSSAYDVAKIS-CNAMKLESFKKIVTTKIHTAQVKVKNQQGLYENVSWTWENTNKLL 496

Query: 210 FLGADGMKTGFTCASGFNIVASAIQG------DQSLIAVILGALDRNTRNKVSASLLSMG 263
             G  G+KTG T A+G  + +           ++ LI VIL A   + R      + +  
Sbjct: 497 DKGWSGIKTGITDAAGPCLASCIKFKDPINEINRYLIIVILSAQSMDIRWSECQKIAAWA 556

Query: 264 FYNKT 268
             N  
Sbjct: 557 VENYD 561


>gi|298231089|ref|ZP_06964770.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae str.
           Canada MDR_19F]
          Length = 134

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 1   MRQ-FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           M++ FL ++ +++L      ++   T    +   ++ NTG ++ E     P   AS+TKL
Sbjct: 1   MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKL 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +T Y+V+  L+     L+TP+ IS    +   ++               +LL     +  
Sbjct: 61  ITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSA 120


>gi|229916043|ref|YP_002884689.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Exiguobacterium sp. AT1b]
 gi|229467472|gb|ACQ69244.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Exiguobacterium sp. AT1b]
          Length = 337

 Score = 91.6 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 15/233 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK--EKKAMLTTPITISKNASEYPP 91
           ++     ++ +   +    PAS TKLMTA + +       +       I  S     +  
Sbjct: 92  VNVTNQEILIDKNANDRVFPASTTKLMTALLAYEKASAANELDQPIITIQQSTLDIPWDS 151

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             +    G T+T+  AL   +++S ND A ++AE    +   FVQ MN+ +K LGL+ T+
Sbjct: 152 HIAHLAIGDTLTVRQALYATLLESGNDAANSLAEYTSGSTNAFVQLMNDRAKVLGLTGTN 211

Query: 152 FMNAHGVVQHGHYTTARDMAIL-----SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-- 204
           F+NAHG     HYTTA DMA +     ++    +      +      +    K       
Sbjct: 212 FVNAHGYSDPNHYTTANDMAKIAFAFSTYPELIEIAGTYEFKAEFKDKDGNGKRRWWYHL 271

Query: 205 ------WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                  +V         KTG+T  SG+ +V       ++ I V + A    T
Sbjct: 272 GSSVNERSVNYSKFVTATKTGYTDESGYTMVFIMKHNSETYILVTMQAKSGQT 324


>gi|254362625|ref|ZP_04978714.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
           PHL213]
 gi|261492868|ref|ZP_05989414.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496782|ref|ZP_05993157.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|153094239|gb|EDN75110.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
           PHL213]
 gi|261307621|gb|EEY08949.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311409|gb|EEY12566.1| S11 family D-Ala-D-Ala carboxypeptidase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 291

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 104/278 (37%), Gaps = 20/278 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI----AETNKL---------PYYTLLDTNTGHVIAENYP 47
           M++F+ ++  A++ +               K            Y + D N    +     
Sbjct: 2   MKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSAYVVFDLNQKKFLEGKNF 61

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +     AS+TKLMTA V     +   +       +  +A     + S   K   +     
Sbjct: 62  NLVRPIASVTKLMTAVVFLEENRYGASC--QTQILPSDADFLKGTTSPLPKNLNIACSEL 119

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           LK ++V+S N  A A+A +    + +F+  MN+ ++ +G++ T+F ++ G+      T  
Sbjct: 120 LKAMLVRSDNYAAHALAHATHLNKAQFLARMNSKAREIGMTQTYFGDSSGLSSDNVSTVV 179

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN---WAVGTFLGADGMKTGFTCAS 224
               +  +       Q +    +  +   G+ +   N           A   KTG+T  +
Sbjct: 180 DLAKLAGYAASKPEIQQLSNSPLVSVYAGGRYFSMKNTNSMVRSQSYQALVSKTGYTREA 239

Query: 225 GFNIVASAIQG--DQSLIAVILGALDRNTRNKVSASLL 260
           G+N+   A      + +  V L   +  +R   + S+L
Sbjct: 240 GYNLAFIAKGDCRGKRIGVVSLNNDNAASRTDFTESML 277


>gi|227874487|ref|ZP_03992662.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227839676|gb|EEJ50131.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 382

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 100/264 (37%), Gaps = 13/264 (4%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +A LS      SI       Y  + D + G ++ E       NPAS+TK+MT  V    L
Sbjct: 115 LAKLSGNGQTKSIGSEVNANYAVVFDLDQGTILGEKNSSVSMNPASMTKVMTLLVAVENL 174

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
            + +  +T    I         SN  F  G  + + + L  +I+ S  D  +A+A+ +  
Sbjct: 175 PDLEKKITITQDIVDYVKARGASNCGFVAGEQVRVKDLLYGVILPSGADAVLALAKEIAG 234

Query: 130 TEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHGHYTTARD----MAILSWRIKTDFPQY 184
           +E  FV  MN  +++LG  S   F NA G+    H+   +D    MA             
Sbjct: 235 SEAGFVALMNKKAQDLGLSSDCKFQNATGLYHSTHHMNVKDIGEIMAAAMRNSLAREVLS 294

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-------ADGMKTGFTCASGFNIVASAI-QGD 236
              +QI      G     TN  V    G           KTGF   S F  V+S      
Sbjct: 295 TENYQIPATNKHGDGIKLTNLFVQRIKGQDTGGASVTMAKTGFVRQSMFCAVSSGKGANG 354

Query: 237 QSLIAVILGALDRNTRNKVSASLL 260
           ++L+ V   +       K  A+L 
Sbjct: 355 KNLLVVTGYSSSTWQCIKDHATLY 378


>gi|169825187|ref|YP_001692798.1| D-alanyl-D-alanine carboxypeptidase [Finegoldia magna ATCC 29328]
 gi|167831992|dbj|BAG08908.1| D-alanyl-D-alanine carboxypeptidase [Finegoldia magna ATCC 29328]
          Length = 289

 Score = 91.2 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 106/265 (40%), Gaps = 20/265 (7%)

Query: 1   MRQFLVIIAMAMLSNI---FPFLSIAETN------KLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ L I+ + +L  +   F F    E              +   +    I    PD   
Sbjct: 1   MKKKLEIVGITLLVVVGLCFIFKIANENKFDKLSFNADCIYVYSIDDEKEIFSKNPDKKV 60

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
            PASLTK+MT Y     +++            +   +   S + F      T ++ L   
Sbjct: 61  YPASLTKMMTVYTALGKIEDFDKKAPIDKKSYQKLVKQNASMAGFYGNEPTTFEDLLYGT 120

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
           ++ SA + A ++A ++  +++KFV  MN  +KN+GL+ T+F N+ G+ +  HY++A+DMA
Sbjct: 121 MLASAGECADSLAINVSGSKEKFVDLMNENAKNMGLNNTNFKNSEGMDEDDHYSSAKDMA 180

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW-----------AVGTFLGADGMKTGF 220
            L      +   Y  +   K    K   +P                        G K+G 
Sbjct: 181 FLLKNSLKNQKFYKIFTTDKYTSTKTFDHPKGIEIESTVLSRLKDYEQDGFKIIGGKSGT 240

Query: 221 TCASGFNIVASAIQGDQSLIAVILG 245
           T  +G      + +  +  I +++G
Sbjct: 241 TEKAGLCWATLSEKNGKKYIIIVMG 265


>gi|303232329|ref|ZP_07319024.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae
           PB189-T1-4]
 gi|302481586|gb|EFL44651.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae
           PB189-T1-4]
          Length = 399

 Score = 90.8 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 86/241 (35%), Gaps = 11/241 (4%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                    +     + +      +     D    PASLTK+MT Y    +++   A   
Sbjct: 135 TPEPPGAPFQSKSIYIYNLTDNCEVKNLNADAQLPPASLTKIMTVYTALQYIRNLDAKAP 194

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
                     +   S + F  G   T  + L   +++S  + A+++A +   +E  FV  
Sbjct: 195 IDTASFAKLDDENASTAGFVAGEQTTFRDLLYGTLLRSGAECAISLAVNTAGSEDAFVAK 254

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF--------- 188
           MN  ++ +GL  THF N  G+  +   +TA ++  +  +  T+      +          
Sbjct: 255 MNKNAQKMGLRHTHFTNTTGLDDNNLMSTAHEIGQMLRQALTNETFRKIFCTASYDSSKT 314

Query: 189 --QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
               KG+ IK     +            G K+G T  +G        +  +  I V +GA
Sbjct: 315 DKHPKGITIKSTVLSHLTPDEQQGFTILGGKSGTTDNAGLCWATLVEKNKKHYIVVTMGA 374

Query: 247 L 247
            
Sbjct: 375 P 375


>gi|313898282|ref|ZP_07831819.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. HGF2]
 gi|312956664|gb|EFR38295.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. HGF2]
          Length = 335

 Score = 90.4 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 80/178 (44%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           T    Y  ++D     V+ E   D    PASLTK++TA V    ++     +T      +
Sbjct: 66  TLNSRYAMVIDLQDQQVLYEKNSDERLFPASLTKVLTAIVALDNMENLHKKITITEQDIE 125

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +E   S +  + G  +TL++ L  LI+ S  D A A+A  L  +  KFV+ MN  +  
Sbjct: 126 GLAEANASVAGLEAGEQVTLEDLLYALILPSGADGANALANHLNGSISKFVKDMNEKANG 185

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           +G+  THF N  G+    HYTT +DM  +      +         ++      K++PN
Sbjct: 186 MGMLHTHFTNTTGLQDKQHYTTLQDMKKMMDHAWKNPAFRKVMTTLRYTIPATKQHPN 243


>gi|225575670|ref|ZP_03784280.1| hypothetical protein RUMHYD_03763 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037127|gb|EEG47373.1| hypothetical protein RUMHYD_03763 [Blautia hydrogenotrophica DSM
           10507]
          Length = 337

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 11/235 (4%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                Y  L+  +TG  I +   +    PAS+TK+MTA V +  L + +  +T    +  
Sbjct: 57  DLYSHYAVLIRRSTGEKIFDLRSEEKMFPASMTKMMTALVAYEQLSDLQTKITLNPDMFD 116

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
             +E   S + F  G  +T  + L  +++ S  +  + +AE +   E+ FV+ MN  +  
Sbjct: 117 KLTEEGASMAGFSAGEEVTALDLLYGVLLPSGAECCIGLAEYIAGDEESFVELMNQKATE 176

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM-----------HYFQIKGL 193
           LG++ THF N  G+    HYTT  DMAIL   +                        +GL
Sbjct: 177 LGMNHTHFCNPTGLHDENHYTTVSDMAILLEALLEKEELRQIISTTSHTSTPTNLHPEGL 236

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
                 + +            G KTG+T  +G  + +      +  I V      
Sbjct: 237 TYPSSMFEDMPADALASGLILGGKTGYTQEAGQCLASFGKADGEEYILVTGKTPG 291


>gi|213161813|ref|ZP_03347523.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 146

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 13/139 (9%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESL 127
           + LIV S ND  VA+A+ +
Sbjct: 125 RGLIVDSGNDACVALADYI 143


>gi|213023592|ref|ZP_03338039.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 148

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 13/139 (9%)

Query: 2   RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
           R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5   RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------STFKKGSTMTLDNAL 108
           SLTKLMT YVV   +   +      +T+ ++A                K+G  +++ +  
Sbjct: 65  SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSVRDLS 124

Query: 109 KLLIVKSANDIAVAIAESL 127
           + LIV S ND  VA+A+ +
Sbjct: 125 RGLIVDSGNDACVALADYI 143


>gi|170016615|ref|YP_001727534.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc citreum KM20]
 gi|169803472|gb|ACA82090.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc citreum KM20]
          Length = 425

 Score = 90.4 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 112/308 (36%), Gaps = 47/308 (15%)

Query: 1   MR--QFLVIIAMAMLSNI----FPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWN 52
           M+  +F+V  ++ ++S +        +     K       ++D  TG V+A         
Sbjct: 1   MKWIKFVVFFSVGLISFVRIVSAAPSAKPIDLKESLTSAVVVDARTGQVLATRNATKLGM 60

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITIS-----KNASEYPPSNSTFKKGSTMTLDNA 107
            AS +K++TAY     + + K    TPI I+      +  +Y  S+   K G  +T+   
Sbjct: 61  IASQSKMLTAYAALRAIHDGKLTWDTPIPITSKADLSHQPKYVYSHLDIKAGDHLTVREL 120

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----- 162
              ++  SAND + A++E L          + + +  L L  + + NA G V        
Sbjct: 121 YNAMLTISANDASFALSEYLTPKGMTTQAALQSWANELKLDHSKWYNAAGQVNGNAFENK 180

Query: 163 ---------HYTTARDMAILSWRIK----------------TDFPQYMHYFQIKGLEIKG 197
                    +  +A  +A+L+  I                           ++   +   
Sbjct: 181 IAHEPGEAANLASAEHLAMLAREIIKLDPNIRTLGESDFISYKSASANRTVKLTTDQFLF 240

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGA---LDRNTRN 253
           +   +   +    L  +G+KTG T  SG         Q     I V+ GA    D  TR 
Sbjct: 241 RHQHSKKVSNPNHLIIEGLKTGSTPESGAAFTGIVKDQAGHEFITVVNGAGYYTDTVTRY 300

Query: 254 KVSASLLS 261
           + + ++++
Sbjct: 301 QETINIVN 308


>gi|264676436|ref|YP_003276342.1| peptidase S11, D-alanyl-D-alanine [Comamonas testosteroni CNB-2]
 gi|262206948|gb|ACY31046.1| peptidase S11, D-alanyl-D-alanine [Comamonas testosteroni CNB-2]
          Length = 205

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 12/166 (7%)

Query: 179 TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG--- 235
            ++  Y    Q            N N  +      DG+KTG T A+G+ +VA+A +    
Sbjct: 5   PEYMHYYATKQYSYPGTPASNGSNRNALLFRDPTVDGLKTGHTNAAGYCLVATAKRDLPN 64

Query: 236 --DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQQNLSNEVP 290
              + L++++LG      R   S  LL+ G+      K       +      +  +N V 
Sbjct: 65  VGQRRLLSIVLGTASEKARANESQKLLNWGYTAFDAVKLFDSDQPVATPAVWKGAANAVK 124

Query: 291 NISEE----VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
               +    V           T++       +     + + +LK K
Sbjct: 125 IGKADGAVVVTVPSGTGGKLTTEVVRQDPLIAPIAKGQSMGVLKVK 170


>gi|313890351|ref|ZP_07823983.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121337|gb|EFR44444.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 390

 Score = 90.0 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 143/361 (39%), Gaps = 55/361 (15%)

Query: 1   MRQFLVIIAMAMLSNIF-----------------PFLSIAETNKLPYYTLLDTNTGHVIA 43
           +++++  + +     +                      +   NK     ++D + G ++ 
Sbjct: 2   LKKYVFSVFLIFTFFVSHLVQADEHNDILNITREAGYQVNPINKPKSSIVVDASNGDILW 61

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKG 99
           ++      +PAS++K+ T Y++F  L + K  L T IT S            SN+    G
Sbjct: 62  QDNALTVRDPASMSKVFTLYLLFEDLAKGKITLDTKITASDTDQSISKIYEISNNKIVAG 121

Query: 100 STMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG- 157
               + + + ++ V S+N   V +A          F+  +NNT+K LG+  THF NA G 
Sbjct: 122 VDYPIRDLITMIAVPSSNAATVMVANYLSQNNSSAFLDRINNTAKRLGMLDTHFNNAGGA 181

Query: 158 --------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYF-----QIKGLEIKGK 198
                              + T+A D+AIL +     +P  + Y      +        +
Sbjct: 182 VAEAFNGYYNPKNYDKSAPNLTSAHDLAILVYHFLKKYPDIVTYTNKSIVKTMVGTPYEE 241

Query: 199 KYPNTNWAVGTF----LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT--- 251
            + + N+++        G DG+KTG + ++ FN + +A +G   +I +++G  D      
Sbjct: 242 TFHSYNYSLPGDKYGLKGVDGLKTGSSPSAAFNAMVTAKRGKARVITIVMGVGDWTDQDG 301

Query: 252 ---RNKVSASLLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIIN 305
              R+  + +L   GF    N   +K+ N    +      S+     +++V T   +  +
Sbjct: 302 EFYRHPFANALTEEGFKILKNGKTQKQANLFPNNKIHTKGSSYSYKENKKVATLIDQFES 361

Query: 306 Y 306
           +
Sbjct: 362 F 362


>gi|289803285|ref|ZP_06533914.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 133

 Score = 90.0 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 2  RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
          R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5  RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55 SLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
          SLTKLMT YVV   +   +      +T+ ++A 
Sbjct: 65 SLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAW 97


>gi|322806098|emb|CBZ03665.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum H04402
           065]
          Length = 167

 Score = 89.7 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 28/164 (17%)

Query: 1   MRQ-----FLVIIAMAMLSNIFPFLSIA-----------------------ETNKLPYYT 32
           M++     F VII +  +  +F     A                                
Sbjct: 1   MKRKIYYFFSVIITITFIFGVFVTPVSAYDQQNQLKKEEKAEDKDSNKEGDSDVDAKSAL 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L++  TG VI E  P   + PAS+TK+MT  +    +   K  LT  +TIS+NA +   S
Sbjct: 61  LIEPTTGKVIYEKNPHEKFAPASVTKIMTMLLSMEAVDSGKIKLTDKVTISENAKKMGGS 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                 G   T+++ LK + + S ND AVA+ E L  +E+ FV+
Sbjct: 121 TMLLDVGEERTVEDLLKGIAIASGNDAAVAMGEYLAGSEEAFVK 164


>gi|23007783|ref|ZP_00049502.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 137

 Score = 89.7 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++ +   ++       +        +  L+D  +G V+ E   D P++PAS+ KLMTA +
Sbjct: 1   MLAVLFGLVLRPSEARAQIFQTAAVHAILIDAESGSVLFEKAADEPFSPASMAKLMTAEI 60

Query: 65  VFSFLKEKKAMLTTPITISKNASEY-----PPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           VF  +KE +  L +  T++++A          S+   +  S + L + L+ LIV+S ND 
Sbjct: 61  VFRAIKEGRLSLDSEFTVTEDAWRRGGAGGGGSSMFAQVNSRIKLSDLLRGLIVQSGNDA 120

Query: 120 AVAIAESLCKTEKKF 134
           A+ IAE++  TE+ F
Sbjct: 121 AITIAENMAGTEEAF 135


>gi|297587879|ref|ZP_06946523.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna ATCC
           53516]
 gi|297574568|gb|EFH93288.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna ATCC
           53516]
          Length = 289

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 101/254 (39%), Gaps = 12/254 (4%)

Query: 4   FLVIIAMAMLS-NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            L++I +  +            +       +   +    I    PD    PASLTK+MT 
Sbjct: 12  LLIVIGVYFIFKVANANKFDKLSFNADCIYVYSIDDEKEIFSKNPDKKVYPASLTKMMTV 71

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
           +     +++            +       S + F      T ++ L   ++ SA + A +
Sbjct: 72  HTALGEIEDFDKKAPIDKKSYQKLVAQNASMAGFYGNEPTTFEDLLYGTMLASAGECADS 131

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
           +A ++  +++KFV  MN  +K +GL+ THF N+ G+ +  HY++A+DMA L      +  
Sbjct: 132 LAINVAGSKEKFVDLMNENAKKMGLNNTHFKNSEGMDEDNHYSSAKDMAFLLKNSLKNEK 191

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-----------ADGMKTGFTCASGFNIVAS 231
            Y  +   K    K   +P       T LG             G K+G T  +G      
Sbjct: 192 FYKIFTTGKYTSTKTLDHPKGIEIESTVLGRLKDYDQDGFKIIGGKSGTTEKAGLCWATL 251

Query: 232 AIQGDQSLIAVILG 245
           + +  +  I +++G
Sbjct: 252 SEKNGKKYIIIVMG 265


>gi|213423411|ref|ZP_03356398.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 160

 Score = 89.3 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
              ++ K     G +  N N  +       DG+KTG T  +G+N+VASA +G   LI+ +
Sbjct: 3   YAVYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTSKAGYNLVASATEGQMRLISAV 62

Query: 244 LGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTT 299
           +G      R   S  LL+ GF        +        +  +  N       + ++V  T
Sbjct: 63  MGGRTYKGRETESKKLLTWGFRFFETVNPLKAGKEFASEPAWFGNTDRASLGVDKDVYLT 122

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEK 325
                  + +     +        +K
Sbjct: 123 IPRGRMKDLKASYVLNTAELHAPLQK 148


>gi|228965491|ref|ZP_04126577.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228794221|gb|EEM41739.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 166

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 4/148 (2%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDLVQISNEVFRVETSPIQVTSNDKTTVRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           N  A+A+AE +   E  F   MN   K 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKDKR 151


>gi|530914|gb|AAA68435.1| Highly similar to the E.coli dacA and dacC gene products;
          putative [Salmonella enterica subsp. enterica serovar
          Typhimurium]
          Length = 108

 Score = 88.9 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 2  RQFLVIIAMA-------MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPA 54
          R+  +  ++        + ++   F           + L+D  TG V+         NPA
Sbjct: 5  RRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQRNPA 64

Query: 55 SLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
          SLTKLMT YVV   +   +      +T+ ++
Sbjct: 65 SLTKLMTGYVVDRAIDSHRISPDDIVTVGRD 95


>gi|225026703|ref|ZP_03715895.1| hypothetical protein EUBHAL_00955 [Eubacterium hallii DSM 3353]
 gi|224955964|gb|EEG37173.1| hypothetical protein EUBHAL_00955 [Eubacterium hallii DSM 3353]
          Length = 209

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 55/105 (52%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +    +  P   L++  TG ++ E   D    PAS+TK+MT  ++F  L +K+  L   +
Sbjct: 102 NTGFQSAAPNAILMEATTGTILYEKDADKEKPPASVTKVMTLLLIFEALSKKQITLNDTV 161

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
           T+S++A+    S    + G T ++D  +K + V SAND  VA + 
Sbjct: 162 TVSEHAASMGGSQVFLEPGETQSVDTMIKCIAVSSANDACVAYSH 206


>gi|313903983|ref|ZP_07837363.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Eubacterium
           cellulosolvens 6]
 gi|313471132|gb|EFR66454.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Eubacterium
           cellulosolvens 6]
          Length = 344

 Score = 88.9 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 18/245 (7%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            L + +    +          PASLTK+MTA +               +T          
Sbjct: 99  LLFNIDQQEAVCAEGIYERIYPASLTKIMTALLCLES---GDLERNVVMTEEDFNLGDGA 155

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S    G +++L + L L++V S+ND + A+A ++  +   FV  MN  +++LG++ TH
Sbjct: 156 QVSQLDVGDSVSLGDLLNLVLVYSSNDASKAVARTVGGSVDNFVNMMNQKAQSLGMTGTH 215

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIK--TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           F N HG+ +  HYTT  D+ ++         F +       +         P T  A  T
Sbjct: 216 FANPHGLHEENHYTTLYDIYLMMNYAYKLPGFSEAASKSSTEIHVSPSDGNPYTFIANST 275

Query: 210 FLGADGM------------KTGFTCASGFNIVASAIQG-DQSLIAVILGALDRNTRNKVS 256
                G+            KTG T  +G  +            IAV+ GA ++       
Sbjct: 276 DEYFTGIYSLPQNVTVLASKTGTTDEAGSCLSLVVQSNYGVKYIAVVTGAQNKEDLYTDM 335

Query: 257 ASLLS 261
           +++L+
Sbjct: 336 SAVLN 340


>gi|333009574|gb|EGK29026.1| D-alanyl-D-alanine carboxypeptidase dacC domain protein [Shigella
           flexneri K-272]
 gi|333020501|gb|EGK39764.1| D-alanyl-D-alanine carboxypeptidase dacC domain protein [Shigella
           flexneri K-227]
          Length = 147

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 41/84 (48%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +   A  +        A +     + L+D  +G V+AE   D   +PASLTK+MT+YVV
Sbjct: 17  FLFLFAPTAFAAEQTVEAPSVDTRAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVV 76

Query: 66  FSFLKEKKAMLTTPITISKNASEY 89
              LK  K  LT  +T+ K+A   
Sbjct: 77  GQALKADKIKLTDMVTVGKDAWAT 100


>gi|255527697|ref|ZP_05394554.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|296185032|ref|ZP_06853442.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|255508610|gb|EET84993.1| Serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
 gi|296049866|gb|EFG89290.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium
           carboxidivorans P7]
          Length = 376

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 116/318 (36%), Gaps = 19/318 (5%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
             TG +I     D    PAS TKL+TA ++     +  A+  T     +  S        
Sbjct: 1   MKTGEIIYAKDIDKQMYPASTTKLLTALLLAENKNKNDALKYTEKAKIQPPSALNADLHP 60

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
              G TMT  + +  L++ S ND+A  IAES+ K +  F   MN   K L L  THF+  
Sbjct: 61  INVGETMTAQDVMDGLLLYSGNDMAYVIAESVGKDDVDFANKMNEKVKQLNLKNTHFVTP 120

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHY----FQIKGLEIKGKKYPNTNWAVGTFL 211
           +G+    HYTTA D++ ++     +             IK          N N  +G   
Sbjct: 121 NGLHDPNHYTTAYDLSNIASTAFQNPWVRETMGKQKNTIKTSSGTSFVIENRNKLLGKN- 179

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKT 268
           G  G KTG+T  +G  +V    +  + ++ V++ +               +++  +  K 
Sbjct: 180 GCIGGKTGYTSEAGKCLVTVYERDGRKILGVVMKSVYDATDMAVFNDMEKIINWSYAAKP 239

Query: 269 ----------DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
                       K I Y       +   N      E++       IN N   K       
Sbjct: 240 VTLYKAGDVVTTKSIKYKPLIIGPEKTINVPICTKEDIVY-YDNYINKNELSKTVNLSNI 298

Query: 319 HFIDFEKITLLKNKITKK 336
           +    +  + + N   K+
Sbjct: 299 NTSSIKGESSIGNLTVKE 316


>gi|293389974|ref|ZP_06634308.1| DacC protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950508|gb|EFE00627.1| DacC protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 293

 Score = 88.5 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 11/260 (4%)

Query: 12  MLSNIFPFLSIAETNK-LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ML N+FP L +         Y + D     V+    P+     AS+TKLMTA V     K
Sbjct: 1   MLKNVFPLLILLPAVAIAQSYVVYDFTHNKVLESGAPNTVRPIASVTKLMTANVFLEHNK 60

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             +   +       +      +++   K + ++    LK+++V S N  A A++ S   T
Sbjct: 61  NPRCTASITD---DDFDYIKGTHTKLPKYTPISCRELLKMMLVHSDNYAAHALSRSAGMT 117

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
             +F+  MN  ++ LG+ +T F ++ G+  H   +    + +  + +K    +       
Sbjct: 118 RLQFIGKMNEKARQLGMKSTRFSDSSGLSNHNVSSVMDLVKLTKYSMKKTEIKAFSNISS 177

Query: 191 KGLEIKGKK--YPNTNW-AVGTFLGADGMKTGFTCASGFNIVAS--AIQGDQSLIAVI-L 244
             ++   +     NTN         A   KTG+   SG+N+V        +++ I VI L
Sbjct: 178 TYVKAGKRNVFVKNTNKLVRDEMFSAAINKTGYIRESGYNLVFVNKVPCNNRATIGVISL 237

Query: 245 GALDRNTRNKVSA-SLLSMG 263
                  R+  +   L   G
Sbjct: 238 NNSSSAYRSSFTKNKLEKYG 257


>gi|269123281|ref|YP_003305858.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Streptobacillus moniliformis DSM 12112]
 gi|268314607|gb|ACZ00981.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Streptobacillus moniliformis DSM 12112]
          Length = 375

 Score = 88.1 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 126/311 (40%), Gaps = 29/311 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M++ L++I    LS     +   E   + Y  L D   G  + +   +     ASLTK+M
Sbjct: 1   MKKILILICTFSLSIYGMEIEKKERIPIIYTALTD---GTEVIDINSELISPIASLTKVM 57

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL-DNALKLLIVKSANDI 119
              V    + + K  L+  +T  K  +     + +   G      ++ LK  ++ S+N+ 
Sbjct: 58  NVIVAKDEISKGKFSLSDKVTFDKYTAFITGGSISAWSGDNSYTLEDLLKAQMIFSSNNA 117

Query: 120 AVAIAESLC-KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY------TTARDMAI 172
           A A A+ +       F+  MN  ++ LG+  T+F +  G+    +       +TA+D+ +
Sbjct: 118 AYATAKHIGLGDIDNFIILMNKKARELGMYNTYFASPAGLPPRLNKGFGMDISTAKDLYL 177

Query: 173 LSWRIKTDF----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           L+     +                     + Y N    +G + G  G+KTG+   +GFNI
Sbjct: 178 LAKYAIENTDILEYSNKKSITFPNSRDPLRMYYNRITMLGEY-GVVGLKTGYHDEAGFNI 236

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLL-------------SMGFYNKTDRKKINY 275
           +  +  GD ++I++ L +     R  +   +L                +Y    +   N 
Sbjct: 237 IIISKIGDSTVISISLNSETEKQRYILQREILSKLSERLEKIIDKDKAYYLFEVKDYKNK 296

Query: 276 IIKDFYQQNLS 286
           I++ + +++++
Sbjct: 297 ILEGYIKEDIN 307


>gi|228958790|ref|ZP_04120501.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228800887|gb|EEM47793.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 166

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 4/148 (2%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSAAL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L +KK  L   + IS        S          T+ + L  L++   
Sbjct: 64  SKLMTEYIVLEQLNDKKIQLDDFVQISNEVFRVETSPIQVTSNDKTTIRDLLHALLLAGN 123

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           N  A+A+AE +   E  F   MN   K 
Sbjct: 124 NRSALALAEHIAGNEDNFTVLMNKKDKR 151


>gi|298247807|ref|ZP_06971612.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
 gi|297550466|gb|EFH84332.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Ktedonobacter
           racemifer DSM 44963]
          Length = 389

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 88/249 (35%), Gaps = 10/249 (4%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              +            LLD + G V+ +       + A  TK M A          +  +
Sbjct: 141 TSTVVAKPVLHGSNAFLLDADMGTVLVDVNGHARVSVAHFTKYMVAITALENADPNQ--M 198

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
            T    S +A     S +    G  + L + L  L++ S ND A  IA ++    + FV 
Sbjct: 199 ITIDQASLDAVPKGLSTAQLVAGDQIPLHDLLNGLLLPSGNDAAGVIARAVGGDPQNFVA 258

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT-----DFPQYMHYFQIK 191
            MN  ++ L L+ THF + + +    +YT+A D+A +           +      +    
Sbjct: 259 MMNEEARQLQLNDTHFNSPYAISSADNYTSAADLASMMRYGMQLEVFSEDITGTIWTLQA 318

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                   + N N       G +   +G     G++ + +       LI V + A     
Sbjct: 319 SAYNHAYVWENVNLPQVNEPGVE---SGHDKEIGYHAIFTPQSNGHLLIGVEINAPSPEA 375

Query: 252 RNKVSASLL 260
            N   +++L
Sbjct: 376 LNADVSTIL 384


>gi|227432858|ref|ZP_03914813.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227351385|gb|EEJ41656.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 251

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 22/249 (8%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++ +T  +++E     P   AS++KLMT Y+V   L      +       K   E   ++
Sbjct: 1   MNADTDKILSEKNAHKPLAIASISKLMTGYLVLKKLPLGT-QVQPSSNTMKIGEESNLAS 59

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                  + + D  L+  +  SAND A+A+ + +  ++ KFV+ M  TS++ GL++  + 
Sbjct: 60  VNLVSNQSYSADELLRAALQLSANDAAIALGDQVSGSQTKFVKLMTKTSQSWGLASAQWY 119

Query: 154 NAHGV-------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
           NA G+                 +  +A D+A+++  I    P+          +  G   
Sbjct: 120 NAAGIRNDEAMDDDVKAPDNAENKMSAVDVALMTDNILEKTPRIKRIVHQSQNQFDGITQ 179

Query: 201 P-----NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL---DRNTR 252
                   N+   T     G K G +  SG + V       +  I V+L A    + +  
Sbjct: 180 DSNYVLMKNYFKNTKYTVTGAKLGISVKSGVSYVGLFTYKGKHYITVVLHADQYTNLSAV 239

Query: 253 NKVSASLLS 261
            + +  +L+
Sbjct: 240 FRETKRILN 248


>gi|152978447|ref|YP_001344076.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Actinobacillus
           succinogenes 130Z]
 gi|150840170|gb|ABR74141.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Actinobacillus
           succinogenes 130Z]
          Length = 296

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 108/293 (36%), Gaps = 15/293 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           MR+ ++  A ++L  +  +           Y + D     V+    P      AS+TKLM
Sbjct: 1   MRKVMLKKAFSILLLLPSWAM------AQSYVVYDFTHDKVLESRSPYSVQPIASVTKLM 54

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V     + +    +      ++      +++   K + M  +  LK ++V S N  A
Sbjct: 55  TANVFLENNRNRNCTASITD---EDNDYIKGTHTRLPKYTPMPCNELLKAMLVHSDNYAA 111

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+A S   +  +F+  MN  +K LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 112 HALARSAGMSRIRFIGKMNEKAKELGMKSTRFTDSSGLSSNNVSSVMDLVKLAKYSLNKP 171

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG---MKTGFTCASGFNIVASAIQGDQ 237
             Q +       +    +     N          G    KTG+   SG+N+V       +
Sbjct: 172 QIQALSDTSAAYIRAGKRNVFVKNTNKLVREEIFGAALNKTGYIRESGYNLVFVNKFQCR 231

Query: 238 S-LIAVI-LGALDRNTRNKVSA-SLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
              I VI L       R+  +   L   G     +R+  N      Y++    
Sbjct: 232 KSTIGVISLNNTSSAFRSAFTKNKLEQYGCLTLNNRELRNSGDDALYEEGYDE 284


>gi|282865542|ref|ZP_06274593.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
 gi|282559586|gb|EFB65137.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           sp. ACTE]
          Length = 905

 Score = 88.1 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 64/352 (18%), Positives = 125/352 (35%), Gaps = 41/352 (11%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYY----------TLL---DTNTGHV-------IAE 44
           LV++ + + +       + +                  ++   +   G V       I  
Sbjct: 513 LVLLLLIVFAIAQAVRPLPDPTLSLSAAPTYTFGGEKLVMPWPEEGQGAVEVEGVGAIGS 572

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK----NASEYPPSNSTFKKGS 100
              + P   AS+ K+MTAYV+              I + +     A+    S +  +KG 
Sbjct: 573 YGKEKPAPIASMAKVMTAYVILQGHPITGDQKGEQIEVDEQAGKEAAITDESTAAIEKGD 632

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
             T    L++L++ S N++A  +A     TEK F++ MN  +K+LG++ T + +  G+  
Sbjct: 633 KFTEYQMLQMLMIPSGNNVARLLARWDAGTEKAFIEKMNAAAKDLGMTNTTYTDPSGLKA 692

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T A D   L   +  +          +       +  N N+ +    G +G+KTG 
Sbjct: 693 STMSTPA-DQITLGKAVMRNDVFREVVDMPQADIPGVGRIYNNNYILLE-DGVNGIKTGS 750

Query: 221 TCASGFNIVASAI--QGD--QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           +  +G N++ +A        + +I  ++GA                       R+    +
Sbjct: 751 STPAGGNLLWTANTVVDGKPRRIIGAVMGATVEGILEAKLER----------ARQNSLKL 800

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           IK   +   S  V     +V           T +   KD ++      ++ L
Sbjct: 801 IKAAQKGVDSATVVK-KGQVVGYVDNGFGARTPVVATKDLKAVGWGGLQVDL 851


>gi|65319857|ref|ZP_00392816.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
          Length = 151

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 55/138 (39%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            L  +  A++   F         +     L+D N+G V+ +   ++    A+L+KLMT Y
Sbjct: 11  LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKKNEENSIQSATLSKLMTEY 70

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +V   L +    L   + IS        S          T+ + L  L++   N   +A+
Sbjct: 71  IVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRSTLAL 130

Query: 124 AESLCKTEKKFVQHMNNT 141
           AE +   E  F Q MN  
Sbjct: 131 AEHIAGNEDNFTQLMNQK 148


>gi|251792511|ref|YP_003007237.1| DacC protein [Aggregatibacter aphrophilus NJ8700]
 gi|247533904|gb|ACS97150.1| DacC protein [Aggregatibacter aphrophilus NJ8700]
          Length = 302

 Score = 87.7 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 108/305 (35%), Gaps = 28/305 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++    +       +              Y + D     V+    P+     AS+TKLM
Sbjct: 12  LKKIFPFLLFMPTFVM-----------AQSYVVYDFTHNKVLESGAPNTVRPIASVTKLM 60

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V     K  +   +      ++      +++   K + +     LK ++V S N  A
Sbjct: 61  TANVFLEHNKNPRCTASITN---EDYDYIKGTHTKLPKYTPIACRELLKAMLVHSDNYAA 117

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ S   T ++F++ MN  +K+LG+ +T F ++ G+      +    + +  + +   
Sbjct: 118 HALSRSAGMTRQQFIKKMNEKAKHLGMRSTRFSDSSGLSNSNVSSAMDLVKLAKYSLAKP 177

Query: 181 FPQYMHYFQIKGLEIKGKKY--PNTNW-AVGTFLGADGMKTGFTCASGFNIVA--SAIQG 235
             + +       ++   +     NTN         A   KTG+   SG+N+V   S    
Sbjct: 178 EIKALSNLSTAYIQAGKRNIFVKNTNKLVRDEMFSAAINKTGYIRESGYNLVFVNSVPCN 237

Query: 236 DQSLIAVILGALDRNTRNKVSA-SLLSMG--------FYNKTDRKKINYIIKDFYQQNLS 286
             ++  + L       R+  +   L   G        F +  D  +      +     L 
Sbjct: 238 RATIGVISLNNSSSAFRSNFTKSKLEKYGCTVLNGRKFKSFEDDIQYEEGYDEQGMDELI 297

Query: 287 NEVPN 291
            +V  
Sbjct: 298 KKVAG 302


>gi|228985666|ref|ZP_04145819.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774061|gb|EEM22474.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 272

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 12/218 (5%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+    L E    L   + IS        S          T+ + L  L++   N  
Sbjct: 1   MTEYITLEQLNEGTIQLDEVVKISNEVFRAETSPIQVTSKDRTTVRDLLHTLLLTGNNRS 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGL-SATHFMNAHGVVQHGHY---TTARDMAILSW 175
           A+A+AE +   E KF Q MN  +K+L L  ++ F+NA G+    +    TTA ++A L+ 
Sbjct: 61  ALALAEHIAGNEDKFTQLMNEKAKHLKLSQSSPFLNATGMNNDTNKLSTTTAIEVAKLAT 120

Query: 176 RIKTDFPQYMHYFQIK--GLEIKGKKYPNTNWAVG------TFLGADGMKTGFTCASGFN 227
           ++ TDFP  ++  ++       K  K  NTN  +          G DG++T F+    ++
Sbjct: 121 QLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKHQGVDGLQTSFSTNGNYS 180

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 181 FVSTAKRGDTRLISVILDAENENSTFIETKKLLQYGFD 218


>gi|328480234|gb|EGF49154.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus MTCC
           5462]
          Length = 250

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 78/238 (32%), Gaps = 30/238 (12%)

Query: 1   MRQFLVIIAMAMLSNIF------------PFLSIAETNKLPYYTLLDTNTGHVIAENYPD 48
           M++ L  +  AM++ +                S            ++  TG V+      
Sbjct: 1   MKKLLRGLVAAMVAVLMIGGAAPAASVAAAESSDTNLVNAKAAVAIEPTTGKVLYAKNAS 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
                AS+TK+++  +V   +K  K      +T+ ++                     ++
Sbjct: 61  TVLPIASMTKMISIELVLDAIKSGKIKWDDKVTLDQSIWTISQDRDLSNVPLRRDGSYSV 120

Query: 109 KLLIVKSANDIAVAIAE----SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV------ 158
           + L   S    A A       ++  +++KFV  M+   K+ G++    +N  G+      
Sbjct: 121 RELYDASLIYSANAAMMLLAKAVAGSQEKFVNQMDAKLKSWGITDAKIVNVTGLNNSQLK 180

Query: 159 --------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                       +  +A+DMA ++  +  D P+ +    I     +       N    
Sbjct: 181 DAKVPGTGDNAENEMSAKDMAQVAQHLIKDHPEVLKTTSIAKQTFRKGTDDAINMENW 238


>gi|108806608|ref|YP_650524.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Antiqua]
 gi|167399990|ref|ZP_02305508.1| penicillin-binding protein 6 (D-alanyl-D-alaninecarboxypeptidase
           fraction C) (DD-peptidase) (DD-carboxypeptidase) (PBP-6)
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|108778521|gb|ABG12579.1| D-alanyl-D-alanine carboxypeptidase [Yersinia pestis Antiqua]
 gi|167050698|gb|EDR62106.1| penicillin-binding protein 6 (D-alanyl-D-alaninecarboxypeptidase
           fraction C) (DD-peptidase) (DD-carboxypeptidase) (PBP-6)
           [Yersinia pestis biovar Antiqua str. UG05-0454]
          Length = 183

 Score = 87.3 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 4/124 (3%)

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DGMKTG+T  +G+N+VASA  G   LI+V+LGA     R   S  LL+ GF        
Sbjct: 14  VDGMKTGYTNGAGYNLVASATDGPMRLISVVLGAPSDKVRFSESEKLLTWGFRFYETVVP 73

Query: 273 INYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           I        +  +  + S     ++E+   T  +    N +     ++        K  +
Sbjct: 74  IKSTKPFVTEKVWLGDNSQVELGVAEDAAITIPKGQMKNLKASYTLNQTELRAPLAKHQV 133

Query: 329 LKNK 332
           +   
Sbjct: 134 VGTI 137


>gi|309776078|ref|ZP_07671069.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308916029|gb|EFP61778.1| serine-type D-Ala-D-Ala carboxypeptidase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 305

 Score = 87.0 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 94/252 (37%), Gaps = 15/252 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 Y L+    G V+     +    PASLTKLM+ Y     ++  +  +  P +I  
Sbjct: 47  KLYSKNYILIRQRDGKVLLHQNEEDEIAPASLTKLMSVYTALQHIENLQETVQVPASIFP 106

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S + F     +T ++ +   ++ S  D  + +A +L  +E  FV  MN  ++ 
Sbjct: 107 KLEREQASMAGFIGNEEVTYEDLIYGALLPSGADACMTLAITLYGSEDAFVAEMNVQAQR 166

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDM-----------AILSWRIKTDFPQYMHYFQIKGL 193
           LGL  T F N  G+ + GH ++  D+                     +         +G+
Sbjct: 167 LGLKNTRFRNCTGLDEEGHVSSVSDIATLLKAAVQLPQFTEAFHAPYYSMAPSNKHSEGM 226

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG----ALDR 249
            I        +    +     G KTG+T A+G  + + A  G+++ + V       A  +
Sbjct: 227 TIYSTMRSTMDQHALSDTAILGGKTGYTKAAGLCLASQAKIGNETWLFVSAHAAGSAETK 286

Query: 250 NTRNKVSASLLS 261
                 + ++  
Sbjct: 287 PYHILDAMNVYD 298


>gi|49185390|ref|YP_028642.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
 gi|49179317|gb|AAT54693.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
           anthracis str. Sterne]
          Length = 272

 Score = 87.0 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 12/218 (5%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+V   L +    L   + IS        S          T+ + L  L++   N  
Sbjct: 1   MTEYIVLEQLDKGNIQLDEVVKISNEVFRAETSPIQVTSKDKTTVRDLLHALLLTGNNRS 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-NAHGVVQHGHY---TTARDMAILSW 175
            +A+AE +   E  F Q MN  +K L LS      NA G+    +    TTA ++  L+ 
Sbjct: 61  TLALAEHIAGNEDNFTQLMNEKAKQLKLSQPSPFLNATGMNNGTNKLSTTTAIEVGKLAT 120

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFN 227
           R+ TDFP  ++  ++   +   K     N     +         G DG++T F+  S ++
Sbjct: 121 RLVTDFPDVLNVTKLTSYQFTFKDTKVFNTNKMIYSLNKNIKLQGVDGLQTSFSTNSNYS 180

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 181 FVSTAKRGDTRLISVILDADNENSTFIETKKLLQYGFD 218


>gi|146620|gb|AAA66340.1| D-alanine carboxypeptidase [Escherichia coli str. K-12 substr.
           W3110]
          Length = 180

 Score = 87.0 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 5/136 (3%)

Query: 202 NTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           N N  +       DG+KTG T  +G+N+VASA +G   LI+ ++G      R   S  LL
Sbjct: 3   NRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLL 62

Query: 261 SMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK 316
           + GF        +        +  +  +       + ++V  T       + +     + 
Sbjct: 63  TWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNS 122

Query: 317 ESHFIDFEKITLLKNK 332
                  +K  ++   
Sbjct: 123 SELHAPLQKNQVVGTI 138


>gi|145529840|ref|XP_001450703.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418325|emb|CAK83306.1| unnamed protein product [Paramecium tetraurelia]
          Length = 490

 Score = 87.0 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 97/279 (34%), Gaps = 40/279 (14%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT-PITIS 83
                 + + D      + +   +     AS+TK+MT YV    ++     +    + ++
Sbjct: 201 NVTAKSFIVYDCIEHKTVLKRKSNKRVEVASITKIMTFYVTLLTIELYNLDVKQIKVKVT 260

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-------------- 129
           K +SE   + +  K    +++++ L  L++ S ND AV IA+++                
Sbjct: 261 KKSSETIGTTAELKYNDILSMEDLLYGLMLPSGNDAAVLIAQAIGTIILFNQQNKRLDLK 320

Query: 130 -----------------------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
                                    + F++HMN  S  +G   T F   HG+    +Y+ 
Sbjct: 321 LIDIEQLSAEGYFYNHEFRFQYCPIEVFIKHMNKYSSQIGQQNTQFACVHGLANEDNYSC 380

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP-NTNWAVGTFLGADGMKTGFTCASG 225
             D+  LS                + +     K     N       G  G+KTG T ++G
Sbjct: 381 CNDIITLSIECLKYELFQTVISSKEYVTKSLYKQYEWKNTNKLLDKGFFGIKTGITESAG 440

Query: 226 FNIVASAIQGDQSL-IAVILGALDRNTRNKVSASLLSMG 263
             + ++    +    I ++L     N R   +  LL   
Sbjct: 441 PCLASAYRSNEMDYYIIIVLNCKHMNMRFDDTIILLQHA 479


>gi|118386189|ref|XP_001026215.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89307982|gb|EAS05970.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 1085

 Score = 86.6 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 120/342 (35%), Gaps = 48/342 (14%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--- 81
             K     + D +    +           AS+TK+MT Y+V   L +        I    
Sbjct: 569 DIKSKCVAVYDLDKKEFVLRIKGQKLSQIASITKIMTCYIVCDLLNKYDFKRNDEIKLTL 628

Query: 82  -------ISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------- 127
                  +SK AS+   +++  + G  +TL + L  L++ S ND A AI+E +       
Sbjct: 629 KKDQIITVSKIASKMIGTSALLRHGDQLTLWDLLHGLMLPSGNDAAFAISEHVGSLIYES 688

Query: 128 -------------------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
                                 +K+F++ MN  ++ L L  T + N HG+    + + A 
Sbjct: 689 SPIFQQKKYQNPKLVSCNPKAGQKEFIKVMNQYAQKLKLQKTFYQNPHGLTNSKNKSCAD 748

Query: 169 DMAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           D+ IL      +          +Y           + + + NTN  + +     G+KTG 
Sbjct: 749 DICILISHAMKNQYFREIVKTIEYTAKISNSRKGSREQTWENTNKLLKSSCYCIGVKTGI 808

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           T A+G  + +     +++ + VIL  L    R   +  +    F    D  +++    + 
Sbjct: 809 TPAAGACLSSCFSINNRNFVIVILNTLTLEMRFTETIQI----FKFLVDIYQLDKQSSNI 864

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFID 322
            ++    +    +       K      +      + +    D
Sbjct: 865 LKEGFDYQPDQANIIENKYTKNGRQITSSSNFQSNNDLELKD 906


>gi|145632611|ref|ZP_01788345.1| adenylate kinase [Haemophilus influenzae 3655]
 gi|144986806|gb|EDJ93358.1| adenylate kinase [Haemophilus influenzae 3655]
 gi|309972477|gb|ADO95678.1| Putative penicillin-binding protein 7 [Haemophilus influenzae
           R2846]
          Length = 292

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 91/266 (34%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F++ MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFIKKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL- 239
             + +       ++    K    N                T     +             
Sbjct: 168 DIKRLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHRCK 227

Query: 240 ---IAVI-LGALDRNTRNKVSASLLS 261
              I VI L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|145634640|ref|ZP_01790349.1| penicillin-binding protein 7 [Haemophilus influenzae PittAA]
 gi|229844548|ref|ZP_04464688.1| penicillin-binding protein 7 [Haemophilus influenzae 6P18H1]
 gi|145268185|gb|EDK08180.1| penicillin-binding protein 7 [Haemophilus influenzae PittAA]
 gi|229812797|gb|EEP48486.1| penicillin-binding protein 7 [Haemophilus influenzae 6P18H1]
          Length = 292

 Score = 86.2 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 91/266 (34%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFVL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F++ MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFIKKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL- 239
             + +       ++    K    N                T     +             
Sbjct: 168 DIKRLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHRCK 227

Query: 240 ---IAVI-LGALDRNTRNKVSASLLS 261
              I VI L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|167745617|ref|ZP_02417744.1| hypothetical protein ANACAC_00309 [Anaerostipes caccae DSM 14662]
 gi|167654929|gb|EDR99058.1| hypothetical protein ANACAC_00309 [Anaerostipes caccae DSM 14662]
          Length = 316

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 67/251 (26%), Positives = 102/251 (40%), Gaps = 26/251 (10%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L++  T  V+A         PAS+TK+MTA +V    +     L   +TI K+ + 
Sbjct: 69  KEALLVNNTTNQVVAAQKVFDKAYPASITKIMTALLVLENCR-----LDDVVTIDKDITF 123

Query: 89  YPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
             P   +   KKG  +T++  L  LIV SAND A+A+   +  ++KKFV  MN  ++ LG
Sbjct: 124 DDPAAVSLHLKKGDKITVEALLNGLIVMSANDTAIALGRKVAGSDKKFVAMMNKRARELG 183

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWR----------------IKTDFPQYMHYFQI 190
            + T+F N +G+    HYTTA D+ ++                         Q       
Sbjct: 184 ATNTNFENPNGLHLKNHYTTAYDLYLIFQELVKHNEFLSIAGKASSYIEYTNQKNKLQAF 243

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVILGALDR 249
                      N N     F    G KTG T  +G  ++        +  I+VIL A  +
Sbjct: 244 DMAATNQYLLGNYNLPHKVF--MLGGKTGTTTEAGSCLIILTKNEEGEEFISVILKASSK 301

Query: 250 NTRNKVSASLL 260
            T       +L
Sbjct: 302 QTLYHTMTEVL 312


>gi|313115459|ref|ZP_07800926.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622226|gb|EFQ05714.1| serine-type D-Ala-D-Ala carboxypeptidase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 446

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 129/375 (34%), Gaps = 42/375 (11%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++   ++++ A+L +     + A          +     +++T+T  ++ +       +
Sbjct: 1   MKRIFALVLSFAVLFSCLVLPAGAMFDPTPVYQVQAQSAYIVNTDTNIIVYDKDSTKQVS 60

Query: 53  PASLTKLMT-AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              LTK MT A ++ ++          P  IS        +N+  +   T T   A+  +
Sbjct: 61  AGGLTKYMTIALLLTNYADHLDDTFQMPFAISDYVYNT--NNADMRSNETFTYREAMYAM 118

Query: 112 IVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++AN+ A+ +A +L   +   +V  MN  S+ +G + + + +A G+            
Sbjct: 119 LTRNANEAAMGLAYALSGGDLASWVSQMNILSQRIGTTGSTWTDACGISSGNVTCAVDMY 178

Query: 171 AILSWRIKTDFPQYMH-----YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF----- 220
            IL + +  D    +          K          + N A+    G    ++       
Sbjct: 179 LILRYLMSFDAFVEVSGAPSFTMPAKEKHRSSSVLVSQNAALSKSSGGKYYRSAMQGGMC 238

Query: 221 ------TCASGFNIVASAIQGDQSLIAVILGALDRNTRNK---------VSASLLSMGFY 265
                 + +   + V+ A +   + I  ++ + D                +  L+   F 
Sbjct: 239 DVTAFKSDSGNQSYVSWANKDGATYIFCVMQSPDTCDDFGYATRRPALCETVKLMDWVFD 298

Query: 266 NKTDRKKIN-----YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + + +  ++       I   Y  + S+     ++ + T      + +   K     +S  
Sbjct: 299 SFSIQAALDTDLTLAEIPVKYSSDTSSLQLYPADSMMTLLPSTGDGSVTQKYFHLPDSVC 358

Query: 321 IDFEKITLLKNKITK 335
              ++  ++     K
Sbjct: 359 APVQQGDVVGTVELK 373


>gi|302670789|ref|YP_003830749.1| D-alanyl-D-alanine carboxypeptidase DacA1 [Butyrivibrio
           proteoclasticus B316]
 gi|302395262|gb|ADL34167.1| D-alanyl-D-alanine carboxypeptidase DacA1 [Butyrivibrio
           proteoclasticus B316]
          Length = 387

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 87/250 (34%), Gaps = 12/250 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E     Y  L++ + G  +A        NPAS+TK++T  V    + +          I 
Sbjct: 134 ENVLSTYALLVNLDNGTAVASKEGTVRINPASMTKILTLLVAAEHITDLDDTFEMTQEIG 193

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                +  S   F  G  +T+ + L   I+ S  D A+ +AE +  +++ FV  MN+   
Sbjct: 194 DFVYSHDCSAVGFSVGEKLTVRDLLYGTILPSGGDAAMCLAEYVAGSQEAFVDMMNDKLT 253

Query: 144 NLGLSAT-HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM------HYFQIKGLEIK 196
            LGLS + HF N  G+    HY T  DMA++    + +   +       +         +
Sbjct: 254 ELGLSDSAHFTNCIGIYNEDHYCTLMDMAMILKAAEENNLCHEVLSTRVYTTSNTVEHPE 313

Query: 197 GKKYPNTNWAVGTFLG----ADGMKTGFTCASGFNIVAS-AIQGDQSLIAVILGALDRNT 251
           G    N                G KTGF   SG    +          I V   A     
Sbjct: 314 GITISNWFIRRIEDKDTHGEVVGAKTGFVVQSGCCGASYQISNDGTHYICVTADAWSSWR 373

Query: 252 RNKVSASLLS 261
                  +  
Sbjct: 374 CIYDHVEIYD 383


>gi|223043679|ref|ZP_03613723.1| penicillin binding protein 4 [Staphylococcus capitis SK14]
 gi|222442957|gb|EEE49058.1| penicillin binding protein 4 [Staphylococcus capitis SK14]
          Length = 388

 Score = 85.8 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 66/322 (20%), Positives = 126/322 (39%), Gaps = 30/322 (9%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNS 94
           G ++     +   +PASLTK+MT Y+    +K  K  +   I I+        +   S+ 
Sbjct: 57  GQILYNYNENKKVDPASLTKMMTMYLTLDAVKSGKIHMKDKIKITSKQAQLSQKSNLSSV 116

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
             + G T T+ + L    + S+N  A+ + E +  +   F   MN  +K   +  THF +
Sbjct: 117 PLEAGQTYTVKDILSQTALASSNAAALILGEKVSGSTSTFTDKMNQQAKTFHMKDTHFTS 176

Query: 155 AHGVVQH--------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             G                     +T++DM I+ + +  + P+ +   Q K    KG+ +
Sbjct: 177 PAGADTELLGSSAPQKYKNQGKTSSTSKDMNIMMYHMIKEHPEILKTTQNKSDTQKGQSF 236

Query: 201 PNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG-----ALDRN- 250
            +TN         + G DG+KTG T  SG+++  +  Q    L   IL      +     
Sbjct: 237 ESTNLSLKGQPKYYKGTDGLKTG-TSDSGYSLALTNKQHGLRLNETILDVTPYPSETAKL 295

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            RN+++  ++         +K ++   +            ++ + V   +K  I  N + 
Sbjct: 296 NRNEIANDMMKYYRKQYEYKKVLSKG-EHQIDGKKYTVKKDLYDVVPKHKKWYIAINDKG 354

Query: 311 KEAKDKESHFIDFEKITLLKNK 332
                 + HF+D      +K +
Sbjct: 355 NAYVHYQRHFLDGASYPSVKAE 376


>gi|289805917|ref|ZP_06536546.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 169

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DG+KTG T  +G+N+VASA +G   LI+ ++G      R   S  LL+ GF        
Sbjct: 4   VDGIKTGHTSKAGYNLVASATEGQMRLISAVMGGRTYKGRETESKKLLTWGFRFFETVNP 63

Query: 273 INYII----KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +        +  +  N       + ++V  T       + +     +        +K  +
Sbjct: 64  LKAGKEFASEPAWFGNTDRASLGVDKDVYLTIPRGRMKDLKASYVLNTAELHAPLQKNQV 123

Query: 329 LKNK 332
           +   
Sbjct: 124 VGTI 127


>gi|16272312|ref|NP_438525.1| penicillin-binding protein 7 [Haemophilus influenzae Rd KW20]
 gi|260580573|ref|ZP_05848401.1| penicillin-binding protein 7 [Haemophilus influenzae RdAW]
 gi|1172032|sp|P44664|PBP7_HAEIN RecName: Full=D-alanyl-D-alanine endopeptidase;
           Short=DD-endopeptidase; AltName: Full=Penicillin-binding
           protein 7 homolog; Short=PBP-7; Flags: Precursor
 gi|1573331|gb|AAC22022.1| penicillin-binding protein 7, putative [Haemophilus influenzae Rd
           KW20]
 gi|260092915|gb|EEW76850.1| penicillin-binding protein 7 [Haemophilus influenzae RdAW]
          Length = 292

 Score = 85.8 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 92/266 (34%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F++ MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFIKKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL- 239
             + +       ++   +K    N                T     +             
Sbjct: 168 DIKRLSNLSATYIQAGKQKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHRCK 227

Query: 240 ---IAVI-LGALDRNTRNKVSASLLS 261
              I VI L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|218513748|ref|ZP_03510588.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli 8C-3]
          Length = 136

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 71/136 (52%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A+L+      +           +LD  TG V+A    D   +PASLTK+MT Y+ F  
Sbjct: 1   MAAVLTVTLAVSAPLAALAGSASLILDARTGKVLAAENADTLNHPASLTKMMTLYLTFEA 60

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           LK  K    TPI +SK A+  PP+    K G T+T+  A+  +IVKSAND A A+AE+L 
Sbjct: 61  LKRGKIDWDTPIRMSKYAAARPPTKLGVKAGGTITVREAVYGMIVKSANDAAAAMAETLG 120

Query: 129 KTEKKFVQHMNNTSKN 144
            +E  F + M   ++ 
Sbjct: 121 GSESGFARMMTAKARQ 136


>gi|148827504|ref|YP_001292257.1| hypothetical protein CGSHiGG_04625 [Haemophilus influenzae PittGG]
 gi|148718746|gb|ABQ99873.1| hypothetical protein CGSHiGG_04625 [Haemophilus influenzae PittGG]
          Length = 292

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 101/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFVL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F++ MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFIKKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQGDQ 237
             + +       ++    K    N               KTG+   SG+N+V       +
Sbjct: 168 DIKRLSNLSATYIQAGEHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHPCK 227

Query: 238 S-LIAVI-LGALDRNTRNKVSASLLS 261
           +  I VI L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|314934816|ref|ZP_07842175.1| penicillin-binding protein 4 [Staphylococcus caprae C87]
 gi|313652746|gb|EFS16509.1| penicillin-binding protein 4 [Staphylococcus caprae C87]
          Length = 388

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/322 (20%), Positives = 125/322 (38%), Gaps = 30/322 (9%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNS 94
           G ++     +   +PASLTK+MT Y+    +K  K  +   I I+        +   S+ 
Sbjct: 57  GQILYNYNENKKVDPASLTKMMTMYLTLDAVKSGKIHMKDKIKITSKQAQLSQKSNLSSV 116

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
             + G T T+ + L    + S+N  A+ +   +  +   F   MN  +K   +  THF +
Sbjct: 117 PLEAGQTYTVKDILSQTALASSNAAALILGAKVSSSTSTFTDKMNQQAKTFHMKDTHFTS 176

Query: 155 AHGVVQH--------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             G                     +T++DM I+ + +  + P+ +   Q K    KG+ +
Sbjct: 177 PAGADTELLGSSAPQKYKNQGKTSSTSKDMNIMMYHMIKEHPEILKTTQNKSDTQKGQSF 236

Query: 201 PNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG-----ALDRN- 250
            +TN         + G DG+KTG T  SG+++  +  Q    L   IL      +     
Sbjct: 237 ESTNLSLKGQPKYYKGTDGLKTG-TSDSGYSLALTNKQHGLRLNETILDVTPYPSETAKL 295

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            RN+++  ++         +K ++   +            ++ + V   +K  I  N + 
Sbjct: 296 NRNEIANDMMKYYRKQYEYKKVLSKG-EHQIDGKKYTVKKDLYDVVPKHKKWYIAINDKG 354

Query: 311 KEAKDKESHFIDFEKITLLKNK 332
                 + HF+D      +K +
Sbjct: 355 NAYVHYQRHFLDGASYPSVKAE 376


>gi|75764312|ref|ZP_00743846.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74488199|gb|EAO51881.1| D-alanyl-D-alanine serine-type carboxypeptidase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 228

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 27/216 (12%)

Query: 2   RQFLVIIAMAML--------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
           ++F+ ++ +  L        SN       A   +     L++ N+G ++ +   D   + 
Sbjct: 12  KRFIALVTVITLACSIFMPYSNASAETGAALNIEAGAAILVEANSGKIVYQKNADELLSI 71

Query: 54  ASLTKLMTAYVVFSFLKEK-KAMLTTPITISKNASEYPPS----NSTFKKGSTMTLDNAL 108
           AS+TK+M+ Y+V   + +      T  I +S+ A +        N   + G + T+    
Sbjct: 72  ASMTKMMSEYLVHEAVDKGKPLSGTQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELY 131

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------- 159
           + + + SAN   +A+AE++   E  FV+ MN+ SK LGL    F+N+ G+          
Sbjct: 132 EAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDLKGMHP 191

Query: 160 -----QHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
                   +  +A+D+A L+  +  D+P+ +   + 
Sbjct: 192 EGTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKT 227


>gi|242372443|ref|ZP_04818017.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus epidermidis
           M23864:W1]
 gi|242349865|gb|EES41466.1| D-alanyl-D-alanine carboxypeptidase [Staphylococcus epidermidis
           M23864:W1]
          Length = 393

 Score = 85.4 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 122/309 (39%), Gaps = 34/309 (11%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS---- 94
           G ++   + +   +PASLTK+MT Y+    +K  K  +   + I+   ++    ++    
Sbjct: 58  GQILYSYHENKKVDPASLTKMMTMYLTLDAVKSGKLHMNDKVKITNQQAQLSRKSNLSSV 117

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
             K G   T+   L    + S+N  A+ + E + K+   F   MN  +K   ++ TH+ +
Sbjct: 118 PLKAGQIYTVKEILSQTALASSNAAALILGEKVSKSTSTFTDQMNQQAKQFHMNHTHYTS 177

Query: 155 AHGVVQH--------------GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             G   H                 +T++DM I+ + +  + P+ +   +      KG+ +
Sbjct: 178 PTGADTHLLGPSAPEKYKNQGKTQSTSKDMNIMMYEMLKNHPEILKITKKTSETQKGQTF 237

Query: 201 PNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG-----ALDRN- 250
            +TN         + G DG+KTG T  SG+++  +  Q    L   IL      +     
Sbjct: 238 KSTNLSLKGQPKYYKGTDGLKTG-TSDSGYSLALTNKQHRLRLNETILDVSPYPSETAKL 296

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
           TRN+++  ++         +K ++          +     ++ +++     +   +   +
Sbjct: 297 TRNEIANDMMKYYRKQYEYKKVLSKGEH-----KIDGTTYDVKKDLYDVVPKHQKWYIAI 351

Query: 311 KEAKDKESH 319
               +   H
Sbjct: 352 NSKGNAYVH 360


>gi|145636368|ref|ZP_01792037.1| penicillin-binding protein 7 [Haemophilus influenzae PittHH]
 gi|319775769|ref|YP_004138257.1| penicillin-binding protein 7 [Haemophilus influenzae F3047]
 gi|329123610|ref|ZP_08252170.1| serine-type D-Ala-D-Ala carboxypeptidase [Haemophilus aegyptius
           ATCC 11116]
 gi|145270533|gb|EDK10467.1| penicillin-binding protein 7 [Haemophilus influenzae PittHH]
 gi|317450360|emb|CBY86576.1| penicillin-binding protein 7 homolog precursor [Haemophilus
           influenzae F3047]
 gi|327469809|gb|EGF15274.1| serine-type D-Ala-D-Ala carboxypeptidase [Haemophilus aegyptius
           ATCC 11116]
          Length = 292

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 101/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ ++  + ++F++ MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAVGISRRQFIKKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|145631817|ref|ZP_01787576.1| penicillin-binding protein 7 [Haemophilus influenzae R3021]
 gi|144982536|gb|EDJ90090.1| penicillin-binding protein 7 [Haemophilus influenzae R3021]
          Length = 292

 Score = 85.0 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 100/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F++ MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFIKKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|145628720|ref|ZP_01784520.1| adenylate kinase [Haemophilus influenzae 22.1-21]
 gi|145638727|ref|ZP_01794336.1| hypothetical protein CGSHiII_08431 [Haemophilus influenzae PittII]
 gi|144979190|gb|EDJ88876.1| adenylate kinase [Haemophilus influenzae 22.1-21]
 gi|145272322|gb|EDK12230.1| hypothetical protein CGSHiII_08431 [Haemophilus influenzae PittII]
 gi|301169066|emb|CBW28663.1| penicillin-binding protein 7 homolog precursor [Haemophilus
           influenzae 10810]
 gi|309750217|gb|ADO80201.1| Putative penicillin-binding protein 7 [Haemophilus influenzae
           R2866]
          Length = 292

 Score = 85.0 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 101/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++    ++              Y + D     V+  + PD     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFSL-----------AQSYVVYDFTHNRVLESHAPDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLNATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|324999565|ref|ZP_08120677.1| putative penicillin-binding protein [Pseudonocardia sp. P1]
          Length = 310

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 83/224 (37%), Gaps = 13/224 (5%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           P     PAS  KL+ A V               +  +   +    S +    G   T+D 
Sbjct: 3   PHARERPASTIKLLLALVADE-----VLPPERVVVGTVEDANIDGSRAGVGPGGRYTVDQ 57

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            L  L++ S ND A A++  L    +  +  M + + +LG   T      G+   G  ++
Sbjct: 58  LLHGLLLASGNDAAHALSRELGGD-QATLAAMQDAAAHLGARDTRPATPSGLDGPGMSSS 116

Query: 167 ARDMAILSWRIKTDFPQY--MHYFQIKGLEI---KGKKYPNTNWAVGTFLGADGMKTGFT 221
           A D+A++             +    I         G +  N +  +GT  G  G K GFT
Sbjct: 117 AYDLALILRAALDRPRIAAALRTPSIPFPGFADRPGFELGNDDRMLGT-PGFLGGKNGFT 175

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSASLLSMGF 264
            A+    V +  +  + L+  ++    +  R    + SLL  GF
Sbjct: 176 DAARHTFVGAVERDGRRLVVALVRGESQPVRMVDQARSLLDWGF 219


>gi|218660826|ref|ZP_03516756.1| D-alanyl-D-alanine carboxypeptidase protein [Rhizobium etli IE4771]
          Length = 245

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 68/194 (35%), Gaps = 6/194 (3%)

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           + +G     F N+ G+       TAR+M  L+  ++  +P    YF +   E       N
Sbjct: 1   REIGHDKAVFGNSTGLPNGKSRVTAREMVTLAAALQQSYPNLYPYFALPDFEWNKIFQRN 60

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
            N  +G  LGADG+ TGFT   G++IVAS  +  + L   + G      R + +  +L  
Sbjct: 61  RNPLLGLDLGADGLATGFTEGEGYSIVASVQRDGRRLFLALAGIASDKERTEEAKRVLEW 120

Query: 263 GFYNKTDRKKINY----IIKDFYQQNLSNE--VPNISEEVCTTQKEIINYNTQMKEAKDK 316
           G     +R+             Y         +      V          + ++      
Sbjct: 121 GLTAFENRQIFAEHEVVGAASVYGGTARTVDLIAKAPVSVYIPVSNPDRLSARIVYRWPL 180

Query: 317 ESHFIDFEKITLLK 330
            +      +   L+
Sbjct: 181 TAPVPPDYQAGTLR 194


>gi|145640314|ref|ZP_01795898.1| adenylate kinase [Haemophilus influenzae R3021]
 gi|145274900|gb|EDK14762.1| adenylate kinase [Haemophilus influenzae 22.4-21]
          Length = 292

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 100/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  + PD     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHAPDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLNATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|291445469|ref|ZP_06584859.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291348416|gb|EFE75320.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 838

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 118/367 (32%), Gaps = 38/367 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------------------YYTLLDTNTGHVIAE 44
            L++I  A++  + P    +                            ++D   G  +  
Sbjct: 446 LLLLIVFAIVQVMRPLPEPSLELTAKPTYTFEGGGTELSWPGQGQSAVMIDGV-GS-LGS 503

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----S 100
                P   AS+ K+MTAYV+      K       IT+ + A +                
Sbjct: 504 EGAQKPAPIASVAKVMTAYVILQEHPLKGDEEGEKITVDQQAEDESKRPDESTAPLTKGQ 563

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +T    L+LL++ S N+ A  +A     +E  F+  MN+ +K +G++ + + +  G+ +
Sbjct: 564 ELTQRQLLQLLMIPSGNNAARLLARWDAGSEDAFIDKMNDAAKEIGMTGSTYTDPSGLEK 623

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T    + +    ++ D  + +       +E    K  N N  +    G  G+KTG 
Sbjct: 624 TTVSTATDQLKLAQAVMRNDVFREIVDMPEVEIEGIDGKIYNNNNLLLQ-PGVSGIKTGS 682

Query: 221 TCASGFNIVASAI--QGDQSL--IAVILGALDRNTRNKV--------SASLLSMGFYNKT 268
           +  +G N++ SA      + L     ++G      R           S  L+       T
Sbjct: 683 STPAGGNLLWSANTKVDGKMLWIYGAVMGQQAGTGRVYDSLELSLQNSLKLIKDAQEAAT 742

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               +       Y  N       +                ++K   + +      +  T 
Sbjct: 743 SATVVKKGDVVGYVDNGFGGQAPVVATKNLKAVGWSGLKVELKVTDNGKGIDHAAKAGTE 802

Query: 329 LKNKITK 335
           + +    
Sbjct: 803 VGSVTVG 809


>gi|239942020|ref|ZP_04693957.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
          Length = 822

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 118/367 (32%), Gaps = 38/367 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------------------YYTLLDTNTGHVIAE 44
            L++I  A++  + P    +                            ++D   G  +  
Sbjct: 430 LLLLIVFAIVQVMRPLPEPSLELTAKPTYTFEGGGTELSWPGQGQSAVMIDGV-GS-LGS 487

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----S 100
                P   AS+ K+MTAYV+      K       IT+ + A +                
Sbjct: 488 EGAQKPAPIASVAKVMTAYVILQEHPLKGDEEGEKITVDQQAEDESKRPDESTAPLTKGQ 547

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +T    L+LL++ S N+ A  +A     +E  F+  MN+ +K +G++ + + +  G+ +
Sbjct: 548 ELTQRQLLQLLMIPSGNNAARLLARWDAGSEDAFIDKMNDAAKEIGMTGSTYTDPSGLEK 607

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T    + +    ++ D  + +       +E    K  N N  +    G  G+KTG 
Sbjct: 608 TTVSTATDQLKLAQAVMRNDVFREIVDMPEVEIEGIDGKIYNNNNLLLQ-PGVSGIKTGS 666

Query: 221 TCASGFNIVASAI--QGDQSL--IAVILGALDRNTRNKV--------SASLLSMGFYNKT 268
           +  +G N++ SA      + L     ++G      R           S  L+       T
Sbjct: 667 STPAGGNLLWSANTKVDGKMLWIYGAVMGQQAGTGRVYDSLELSLQNSLKLIKDAQEAAT 726

Query: 269 DRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
               +       Y  N       +                ++K   + +      +  T 
Sbjct: 727 SATVVKKGDVVGYVDNGFGGQAPVVATKNLKAVGWSGLKVELKVTDNGKGIDHAAKAGTE 786

Query: 329 LKNKITK 335
           + +    
Sbjct: 787 VGSVTVG 793


>gi|145508567|ref|XP_001440233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407439|emb|CAK72836.1| unnamed protein product [Paramecium tetraurelia]
          Length = 456

 Score = 84.6 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/294 (20%), Positives = 107/294 (36%), Gaps = 46/294 (15%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT-PITIS 83
                 + + D     ++++   +     ASLTK+MT Y+    L +         + ++
Sbjct: 165 NVSAKSFIVYDCIENRIVSQRKCNKRMEIASLTKIMTFYITMVILAKFNLNSKEIRVKVT 224

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK-------------- 129
           K ASE   + S  K    +T+ + L  L++ S ND A+ IA+++                
Sbjct: 225 KKASETIGTTSELKYNDILTIQDLLYGLMLPSGNDAAILIAQTIGTIILFYESNKYLDST 284

Query: 130 -----------------------TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
                                    + F+  MN  S  +G   T F   HG+    +Y++
Sbjct: 285 LIDIEQMSAEGHYYNVELKTQLCPIEIFISKMNYYSNLMGQQNTQFACVHGLANEDNYSS 344

Query: 167 ARDM-----AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
             D+       L + I         Y        K  ++ NTN  +    G  G+KTG T
Sbjct: 345 CHDIVLLSLECLKYDIFHQVISCKEYISKSLNNNKYYEWKNTNKLLE--KGFFGIKTGIT 402

Query: 222 CASGFNIVASAIQGDQSL-IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
            ++G  + ++    ++   I V+L   +   R   + SLL    Y K+    I 
Sbjct: 403 DSAGPCLASAYRSNEKEYYIIVVLSCKNLQLRFDETISLLQHAKYKKSLNSIIQ 456


>gi|295104652|emb|CBL02196.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 447

 Score = 84.3 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 120/375 (32%), Gaps = 42/375 (11%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++   ++++   L +     + A          +     +++T+T  ++ +       +
Sbjct: 1   MKRIFALVLSFVFLLSCLVLPAGAMFDPSPVYQVQAASAYIVNTDTNIIVYDKDSTKQVS 60

Query: 53  PASLTKLMTAYVVF-SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              LTK MT  V+  ++  +       P  IS        +N+  +   T T   A+  +
Sbjct: 61  AGGLTKYMTLAVLLTNYADQLDNTFQMPFAISDYVYNT--NNADMRSNETFTYREAMYAM 118

Query: 112 IVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++AN+ A+ +A +L   +   +V  MN  S+ +G +A+ + +A G+            
Sbjct: 119 LTRNANEAAMGVAYTLSGGDLDGWVAQMNTLSQRIGTTASSWTDACGIDSGNTTCAVDMY 178

Query: 171 AILSWRIKTDFPQYMH-----YFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTG 219
            IL + +  D    +          K          + N A         +  A      
Sbjct: 179 LILRYLMSFDAFVEVSGAPSFTMPAKEKHRSSSVLVSQNAALSKASGGSYYRSAMQGGMC 238

Query: 220 FTCASGFN-----IVASAIQGDQSLIAVILGALDRNTRN---------KVSASLLSMGFY 265
              A   +      V+   +   + I  ++ + D                +  L+   F 
Sbjct: 239 SVTAFKNDTGTQSYVSWGNKDGATYIFCVMDSPDSCDTFGYANRRPALFETVKLMDWVFD 298

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNI-----SEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + + +  ++  +         +   +      ++ + T      +     K     +   
Sbjct: 299 SFSIQAALDTDLTIAEIPVRYSSDTDTLQLYPNDSMMTLLPSTSDGTVTQKYFHLPDYVC 358

Query: 321 IDFEKITLLKNKITK 335
              ++  ++     K
Sbjct: 359 APIQQGDVVGTVELK 373


>gi|229846451|ref|ZP_04466559.1| hypothetical protein CGSHi7P49H1_07260 [Haemophilus influenzae
           7P49H1]
 gi|229810544|gb|EEP46262.1| hypothetical protein CGSHi7P49H1_07260 [Haemophilus influenzae
           7P49H1]
          Length = 292

 Score = 84.3 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQGDQ 237
             + +       ++    K    N               KTG+   SG+N+V       +
Sbjct: 168 DIKRLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHPCK 227

Query: 238 S-LIAVI-LGALDRNTRNKVSASLLS 261
           +  I VI L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|88856162|ref|ZP_01130822.1| D-alanyl-D-alanine endopeptidase [marine actinobacterium PHSC20C1]
 gi|88814481|gb|EAR24343.1| D-alanyl-D-alanine endopeptidase [marine actinobacterium PHSC20C1]
          Length = 408

 Score = 84.3 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 110/331 (33%), Gaps = 29/331 (8%)

Query: 8   IAMAMLSNIFPFLSIA----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++  +LS   P L+       +      + LD  TG V+A    + P   AS+TK++T+ 
Sbjct: 41  VSATVLSAAAPELAEPELTLPSYGASAISALD-RTG-VLARAGSEEPLPIASITKVITSL 98

Query: 64  VVFSFLK-----------EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           VV                  +  L                      G  ++    + +++
Sbjct: 99  VVLDAKPLAVDEAGPTITFGQPDLDYYY----TQQAQFGLVWPVFDGQQLSQREVMNVVL 154

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           + SAN+ A ++A     +EK F        K  GL  T    A G+ +    +TA D+  
Sbjct: 155 LASANNYAQSLAHWAFGSEKAFTAAAAQWLKEQGLEQTTLTEASGIQETNQ-STAEDLTE 213

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L+     +                     N N  +G   G DG+KTG        ++ SA
Sbjct: 214 LARLAIENPVIAEIVATPSTEVPGLGTVSNRNQLLGI-DGVDGIKTGTLEDDWACLLFSA 272

Query: 233 IQ----GDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
                   ++ + V+LG  D  T       L++      T+    +   +         +
Sbjct: 273 DVVIGGEKKTFVGVVLGGPDHPTVAAAIRELIADATAGYTEVTLASDGDEFAEYDTPWGD 332

Query: 289 VPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
               +     T K+++  + ++    D    
Sbjct: 333 --EAAAVASNTVKKLVWGDDEITITVDASPV 361


>gi|319653046|ref|ZP_08007150.1| hypothetical protein HMPREF1013_03765 [Bacillus sp. 2_A_57_CT2]
 gi|317395265|gb|EFV75999.1| hypothetical protein HMPREF1013_03765 [Bacillus sp. 2_A_57_CT2]
          Length = 290

 Score = 84.3 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 11/226 (4%)

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN-LGLSATHFMNAHGVVQ 160
           M L   ++ +++ S ND A +IAE L    K F +++N+  +   GL  THF+N HG+  
Sbjct: 1   MPLIKLVQGMLINSGNDAAWSIAEHLDGNMKAFSENLNHYLEESAGLKNTHFVNPHGLFD 60

Query: 161 HGHYTTARDMAILSWRIKTD------FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
             HYTTA D+A L+     +      +      +  K  +     +         F G  
Sbjct: 61  ENHYTTAGDLAKLTNYALKNETFREIYGTKEMKWAGKSWDTTIFTHHRMLKGEVPFEGVT 120

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
           G KTGF   +   +  SA      L A++L A  +      + +LL+ GF N       +
Sbjct: 121 GGKTGFVDEAKQTLATSAENDSIKLTAIVLKAEFKRDIYNDTKNLLNYGFSNFETSTLSS 180

Query: 275 YIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
             +      +         E V  T  + I       + K +  + 
Sbjct: 181 TDVFP----SDGKTYTTGGENVAITLPKGIYEEDITSKGKLQIKNE 222


>gi|160943144|ref|ZP_02090381.1| hypothetical protein FAEPRAM212_00629 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445613|gb|EDP22616.1| hypothetical protein FAEPRAM212_00629 [Faecalibacterium prausnitzii
           M21/2]
          Length = 447

 Score = 84.3 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 121/375 (32%), Gaps = 42/375 (11%)

Query: 1   MRQFL-VIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++   ++++   L +     + A          +     +++T+T  ++ +       +
Sbjct: 1   MKRIFALVLSFVFLLSCLVLPAGAMFDPSPVYQVQAASAYIVNTDTNIIVYDKDSTKQVS 60

Query: 53  PASLTKLMTAYVVF-SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              LTK MT  V+  ++  +       P  IS        +N+  +   T T   A+  +
Sbjct: 61  AGGLTKYMTLAVLLTNYADQLDNTFQMPFAISDYVYNT--NNADMRSNETFTYREAMYAM 118

Query: 112 IVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + ++AN+ A+ +A +L   +   +V  MN  S+ +G +A+++ +A G+            
Sbjct: 119 LTRNANEAAMGVAYTLAGGDLDGWVAQMNTLSQRIGTTASNWTDACGIDSGNTTCAVDMY 178

Query: 171 AILSWRIKTDFPQYMH-----YFQIKGLEIKGKKYPNTNWA------VGTFLGADGMKTG 219
            IL + +  D    +          K          + N A         +  A      
Sbjct: 179 LILRYLMSFDAFVEVSGAPSFTMPAKEKHRSSSVLVSQNAALSKASGGSYYRSAMQGGMC 238

Query: 220 FTCASGFN-----IVASAIQGDQSLIAVILGALDRNTRN---------KVSASLLSMGFY 265
              A   +      V+   +   + I  ++ + D                +  L+   F 
Sbjct: 239 NVTAFKNDTGTQSYVSWGNKDGATYIFCVMDSPDSCDTFGYANRRPALFETVKLMDWVFD 298

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNI-----SEEVCTTQKEIINYNTQMKEAKDKESHF 320
           + + +  ++  +         +   +      ++ + T      +     K     +   
Sbjct: 299 SFSIQAALDTDLTIAEIPVRYSSDTDTLQLYPNDSMMTLLPSTSDGTVTQKYFHLPDYVC 358

Query: 321 IDFEKITLLKNKITK 335
              ++  ++     K
Sbjct: 359 APIQQGDVVGTVELK 373


>gi|228475540|ref|ZP_04060258.1| penicillin binding protein 4 [Staphylococcus hominis SK119]
 gi|314935406|ref|ZP_07842759.1| penicillin-binding protein 4 [Staphylococcus hominis subsp. hominis
           C80]
 gi|228270322|gb|EEK11757.1| penicillin binding protein 4 [Staphylococcus hominis SK119]
 gi|313656741|gb|EFS20480.1| penicillin-binding protein 4 [Staphylococcus hominis subsp. hominis
           C80]
          Length = 383

 Score = 84.3 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 118/326 (36%), Gaps = 32/326 (9%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NS 94
           G ++     +   +PASL+K+MT Y+    + + K  L   + I+    +        + 
Sbjct: 57  GQILYNFQGNKEADPASLSKMMTLYLTLEAVHQGKLKLDDKVKITSAYDQLSKKPNLTSV 116

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
              +G   T+ + L    + S+N  A+ + E +      F   MN  +K   +  THF+N
Sbjct: 117 PLNQGQIYTIKDLLTQAALPSSNSAAMILGEQVSGNTSTFTDKMNAQAKAFHMKHTHFVN 176

Query: 155 AHGVV--------------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             G                     +T+ D+AILS  +    P+ ++  Q+     KG  +
Sbjct: 177 PAGAANDLLGQQAPKKYRKDIYPKSTSEDIAILSHHLIAKHPKILNITQLSQDTQKGYTF 236

Query: 201 PNTNWAVGTFL----GADGMKTGFTCASGFNIVASAIQGDQSLIAVILG------ALDRN 250
            NTN ++        G DG+KTG T   G+NI  +  Q    L  V++          + 
Sbjct: 237 NNTNLSIKHEPLYLKGTDGLKTG-TSDKGYNIALTNQQNHLRLNEVVMNVAPYMDNNAKY 295

Query: 251 TRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
            RN++  ++          +K ++        +       + +      +          
Sbjct: 296 NRNRIGNAIFKHYRKEYEYKKVLSKGEHKIGGKTYK---VDKNLYDTVPKDNKKWDIRIN 352

Query: 311 KEAKDKESHFIDFEKITLLKNKITKK 336
           K+ K    +  DF   T       KK
Sbjct: 353 KDGKAYVHYKRDFLPETTYPRVNAKK 378


>gi|260582544|ref|ZP_05850334.1| penicillin-binding protein 7 [Haemophilus influenzae NT127]
 gi|260094355|gb|EEW78253.1| penicillin-binding protein 7 [Haemophilus influenzae NT127]
          Length = 292

 Score = 84.3 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 99/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|328883123|emb|CCA56362.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces venezuelae ATCC
           10712]
          Length = 781

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 116/284 (40%), Gaps = 34/284 (11%)

Query: 1   MRQ--------FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN----------TGHVI 42
           MR+         L++I  A++  + P  + A T         +             G V 
Sbjct: 379 MRRVRIWTPLVLLLLIVFAIVQMVRPLPAPALTLTAAPTFTFEGGELKLPFPAEGQGAVE 438

Query: 43  AE-------NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PP 91
            E            P   AS+TK MTAYV+      K       I I + A++       
Sbjct: 439 VEGVGSMGTYGAQKPAPIASVTKTMTAYVILRDHPLKGKQQGPEIEIDQKAADQGKAEHE 498

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S +  +KG T T    L+LL++ SAN++A  +A     +E  FV+ MN  +K LG++ + 
Sbjct: 499 STAAVQKGQTYTEKELLELLMIPSANNVARLLARWDAGSEAAFVEKMNAAAKQLGMTQST 558

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
           + +  G++     T    + +    ++ D  + +       ++    +  N N  +    
Sbjct: 559 YTDPSGLLDSTMSTPQDQLKLAKAVMQYDVFREIVNMPNVTVDGIPGRIENNNNILLK-P 617

Query: 212 GADGMKTGFTCASGFNIVASAIQ----GDQSLIAVILGALDRNT 251
           G  G+KTG +  +G N++ +A       ++ ++ +++GA D   
Sbjct: 618 GVSGIKTGSSTPAGGNLLWAANTVVDGQNRRILGIVMGAKDAAE 661


>gi|319896693|ref|YP_004134886.1| penicillin-binding protein 7 homolog precursor [Haemophilus
           influenzae F3031]
 gi|317432195|emb|CBY80547.1| penicillin-binding protein 7 homolog precursor [Haemophilus
           influenzae F3031]
          Length = 292

 Score = 83.9 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 99/266 (37%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++     +              Y + D     V+  +  D     AS+TKLMT
Sbjct: 3   KKALFILSLCPSFAL-----------AQSYVVYDFTHNRVLESHASDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLNATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|68248967|ref|YP_248079.1| penicillin-binding protein 7-like protein [Haemophilus influenzae
           86-028NP]
 gi|68057166|gb|AAX87419.1| penicillin-binding protein 7 homolog precursor [Haemophilus
           influenzae 86-028NP]
          Length = 292

 Score = 83.9 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++                    Y + D     V+    PD     AS+TKLMT
Sbjct: 3   KKALFILSLC-----------PSFLLAQSYVVYDFTHNRVLESYAPDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKLLSNLSATYIQAGKHKLYIKNTNKLVRDEIFDAAVNKTGYIRESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|325577791|ref|ZP_08148066.1| serine-type D-Ala-D-Ala carboxypeptidase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325160536|gb|EGC72662.1| serine-type D-Ala-D-Ala carboxypeptidase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 291

 Score = 83.5 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 20/269 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ L ++ +                    Y + D     V+  + P+H    AS+TKLM
Sbjct: 2   LKKVLSVLCLV-----------PAVATAQSYIVYDFTHDRVLESSSPNHVQPIASVTKLM 50

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V     +      +       +      +++   K + ++ +  LK ++V S N  A
Sbjct: 51  TANVFLENNRNANCTASITD---DDYDYIKGTHTKLPKYTPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ S   +  +F+Q MN  ++ LG+ +T F ++ G+      +    + +  + +   
Sbjct: 108 HALSRSAGMSRLQFIQKMNEKARELGMRSTRFSDSSGLSDSNISSAMDLVKLAKYSLNKT 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQG-D 236
             + +       ++  G+     N               KTG+   SG+N+V       +
Sbjct: 168 QIKNLSNMPSAFIQAGGRSVFVKNTNKLVREEVFDAAVNKTGYIRESGYNLVFVNKNPCN 227

Query: 237 QSLIAVI-LGALDRNTRNKVSA-SLLSMG 263
            S I VI L       R+  +   L   G
Sbjct: 228 HSTIGVISLNNHSSAFRSNFTKGKLEQYG 256


>gi|240851509|ref|ZP_04752260.1| penicillin-binding protein 7 precursor [Actinobacillus minor 202]
 gi|240310027|gb|EER48319.1| penicillin-binding protein 7 precursor [Actinobacillus minor 202]
          Length = 274

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 104/269 (38%), Gaps = 20/269 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++   ++ +    ++              Y + D     V+    P+     AS+TKLM
Sbjct: 2   LKKLFSVLLIVPSFSM-----------AQSYVVYDFTHDRVLESRAPNSVQPIASVTKLM 50

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA +     K K    T     S        + +   K + ++ D  LK ++V S N  A
Sbjct: 51  TANIFLENNKNKNCTATITEADSD---FIKGTGTKLPKHTPISCDELLKAMMVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ S   T  +F+Q MN  ++ LG+ +T F ++ G+      +    + +  + ++  
Sbjct: 108 HALSRSAGMTRPQFIQKMNEKAQQLGMRSTRFSDSSGLSSANISSAMDLVKLARYSLQKP 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG---MKTGFTCASGFNIVASAIQG-D 236
             Q +       +++  ++    N +             KTG+   SG+N+V    Q  +
Sbjct: 168 KLQELSNTPATLVQVGKRQVFMQNTSALVREEIFNAALNKTGYIRESGYNLVFVNKQQCN 227

Query: 237 QSLIAVI-LGALDRNTRNKVSA-SLLSMG 263
            + I VI L       R+  +   L   G
Sbjct: 228 HATIGVISLNNYSSAIRSNFTKTKLEQYG 256


>gi|240947887|ref|ZP_04752327.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Actinobacillus
           minor NM305]
 gi|240297849|gb|EER48285.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Actinobacillus
           minor NM305]
          Length = 275

 Score = 83.1 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 96/242 (39%), Gaps = 9/242 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y + D     V+    P+     AS+TKLMTA V     + +   ++      ++A 
Sbjct: 2   AQSYVVYDFTHDRVLESRSPNSVQPIASVTKLMTANVFLENNQNRNCAISITD---EDAD 58

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               +++     + ++    LK ++V S N  A A++ +   +  +F+Q MN  ++ LG+
Sbjct: 59  YIKGTSTKLPTYTPISCQELLKAMLVHSDNYAAHALSRAAGMSRTQFIQKMNEKARELGM 118

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
            +T F ++ G+      +    + +  + +     Q +       +    K     N   
Sbjct: 119 RSTRFSDSSGLSSANVSSVMDLVKLAKYSLGKSQIQILSNMAAAYIHAGRKNIFVKNTNK 178

Query: 208 GTFL---GADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLS 261
                   A   KTG+   SG+N+V    Q  +++ I VI L       R++ +   L  
Sbjct: 179 LVREELFSAAINKTGYIRESGYNLVFINKQPCNRATIGVISLNNSSSAYRSQFTKNKLEQ 238

Query: 262 MG 263
            G
Sbjct: 239 YG 240


>gi|33150032|gb|AAP97032.1| putative D-alanyl-D-alanine carboxypeptidase [Lactobacillus reuteri
           DSM 20016]
          Length = 162

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 75/160 (46%), Gaps = 6/160 (3%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAET-NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           M++  + I+++ M+  +     +A          + D +TG +I +   D     AS+TK
Sbjct: 1   MKKLTVFILSLFMMLMVGSQSVLANNRIDASAAIMADASTGQIIYKQNVDKALPVASITK 60

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNA----SEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           L+T  V+   +++K+    T + I+       ++   S+   K G + ++   +   +VK
Sbjct: 61  LLTILVIEDEIQQKQLSWDTQVKITPEIAAISNDAAYSSIGLKSGQSYSVRTLINAALVK 120

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
           SA+   VA+A +      +F   M   +K +G++ T+ +N
Sbjct: 121 SADGATVALATATGDGTDEFNLKMMQKAKKIGMTKTNIVN 160


>gi|93007306|gb|ABE97154.1| putative D-alanyl-D-alanine carboxypeptidase [Pasteuria ramosa]
          Length = 179

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 3/128 (2%)

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
            G DG+KTGFT  +GF I ++A + +  +IAV++G      RN   A++    F N    
Sbjct: 1   KGVDGLKTGFTGNAGFCISSTAKRDNLRVIAVVMGEPSSKVRNADIAAMFDYTFANYKRH 60

Query: 271 KKINYII---KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327
                     +   +  +  ++   +        +    N  +K   +        +K T
Sbjct: 61  IIYKAGTTIARSKIKGGVIEDLVIKAPYDIGILLKKTGVNFNIKTKLNMNPLIAPLKKGT 120

Query: 328 LLKNKITK 335
            + + + K
Sbjct: 121 KIGDFVIK 128


>gi|148825354|ref|YP_001290107.1| hypothetical protein CGSHiEE_01190 [Haemophilus influenzae PittEE]
 gi|148715514|gb|ABQ97724.1| hypothetical protein CGSHiEE_01190 [Haemophilus influenzae PittEE]
          Length = 292

 Score = 83.1 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 21/266 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++ L I+++                    Y + D     V+    PD     AS+TKLMT
Sbjct: 3   KKALFILSLC-----------PSFLLAQSYVVYDFTHNRVLESYAPDSIQPIASVTKLMT 51

Query: 62  AYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           A V     K         I I+ ++      + +   K   ++ +  LK ++V S N  A
Sbjct: 52  ANVFLENNK----NPNCRIAITKEDTDRIKGTGTKLPKNIPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   + ++F+  MN  +  LG+ +T F ++ G+  +   +    + +  + +   
Sbjct: 108 HALSRAAGISRRQFINKMNEKAHQLGMYSTRFHDSSGLSSYNISSPMDLVKLAKYSLNKA 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQ--G 235
             + +       ++    K    N               KTG+   SG+N+V        
Sbjct: 168 DIKRLSNLSATYIQAGKYKLYIKNTNKLVRDEIFDAAVNKTGYIQESGYNLVFINKHLCK 227

Query: 236 DQSLIAVILGALDRNTRNKVSASLLS 261
           + ++  + L       R+  + S L 
Sbjct: 228 NATIGVISLNNTSSAYRSSFTKSKLE 253


>gi|239988485|ref|ZP_04709149.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
          Length = 384

 Score = 82.7 bits (202), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 109/325 (33%), Gaps = 19/325 (5%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     ++D   G  +       P   AS+ K+MTAYV+      K       IT+ + A
Sbjct: 34  QGQSAVMIDGV-GS-LGSEGAQKPAPIASVAKVMTAYVILQEHPLKGDEEGEKITVDQQA 91

Query: 87  SEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
            +                 +T    L+LL++ S N+ A  +A     +E  F+  MN+ +
Sbjct: 92  EDESKRPDESTAPLTKGQELTQRQLLQLLMIPSGNNAARLLARWDAGSEDAFIDKMNDAA 151

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           K +G++ + + +  G+ +    T    + +    ++ D  + +       +E    K  N
Sbjct: 152 KEIGMTGSTYTDPSGLEKTTVSTATDQLKLAQAVMRNDVFREIVDMPEVEIEGIDGKIYN 211

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAI--QGDQSL--IAVILGALDRNTRNKV--- 255
            N  +    G  G+KTG +  +G N++ SA      + L     ++G      R      
Sbjct: 212 NNNLLLQ-PGVSGIKTGSSTPAGGNLLWSANTKVDGKMLWIYGAVMGQQAGTGRVYDSLE 270

Query: 256 -----SASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
                S  L+       T    +       Y  N       +                ++
Sbjct: 271 LSLQNSLKLIKDAQEAATSATVVKKGDVVGYVDNGFGGQAPVVATKNLKAVGWSGLKVEL 330

Query: 311 KEAKDKESHFIDFEKITLLKNKITK 335
           K   + +      +  T + +    
Sbjct: 331 KVTDNGKGIDHAAKAGTEVGSVTVG 355


>gi|213025793|ref|ZP_03340240.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 129

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 4  FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
              +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 4  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 63

Query: 57 TKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
          TK+MT+YV+   +K  K   T  +T+  +A   
Sbjct: 64 TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWAT 96


>gi|222874969|gb|EEF12100.1| predicted protein [Populus trichocarpa]
          Length = 326

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 30/61 (49%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                  + L D  +G  +A    D    PASLTKLMTAY+ F  LKEK+  L   +T +
Sbjct: 247 PQVAAKSWMLYDVTSGQALASQNADMRIEPASLTKLMTAYLAFEALKEKRLTLDQTVTPT 306

Query: 84  K 84
            
Sbjct: 307 D 307


>gi|226330782|ref|ZP_03806300.1| hypothetical protein PROPEN_04703 [Proteus penneri ATCC 35198]
 gi|225201577|gb|EEG83931.1| hypothetical protein PROPEN_04703 [Proteus penneri ATCC 35198]
          Length = 109

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDR 270
           +  DG+KTG T  +G+N+V+SA +GD  LIAV+LGA     R   S  LL  GF      
Sbjct: 1   MNVDGVKTGHTNGAGYNLVSSATEGDMRLIAVVLGAPSDKVRFAESEKLLGWGFRFFETV 60

Query: 271 KKINY----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQM 310
             +        +  +  +       ++ +   T  +     ++ 
Sbjct: 61  TPVKAATPLTSQKVWYGDKGEVALGVANDASITIPKGELKKSES 104


>gi|301154684|emb|CBW14147.1| D-alanyl-D-alanine endopeptidase [Haemophilus parainfluenzae T3T1]
          Length = 291

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 101/269 (37%), Gaps = 20/269 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++ L ++ +                    Y + D     V+  + P+H    AS+TKLM
Sbjct: 2   LKKVLSVLCLV-----------PAMATAQSYVVYDFTHDRVLESSSPNHVQPIASVTKLM 50

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V     +      +       +      +++   K + ++ +  LK ++V S N  A
Sbjct: 51  TANVFLENNRNTNCTASITD---DDYDYIKGTHTKLPKYTPISCNELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ S   +  +F+Q MN  ++ LG+ +T F ++ G+      +    + +  + +   
Sbjct: 108 HALSRSAGMSRLQFIQKMNEKARELGMRSTRFSDSSGLSDSNISSVMDLVKLAKYSLNKA 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD---GMKTGFTCASGFNIVASAIQG-D 236
             + +       ++  G+     N               KTG+   SG+N+V       +
Sbjct: 168 QIKNLSNMPSAFIQAGGRSVFVKNTNKLVREEVFDAAINKTGYIRESGYNLVFVNKNPCN 227

Query: 237 QSLIAVI-LGALDRNTRNKVSA-SLLSMG 263
           ++ I VI L       R   +   L   G
Sbjct: 228 RATIGVISLNNHSSAFRTNFTKGKLEQYG 256


>gi|223041814|ref|ZP_03612004.1| penicillin-binding protein 7 precursor [Actinobacillus minor 202]
 gi|223017383|gb|EEF15804.1| penicillin-binding protein 7 precursor [Actinobacillus minor 202]
          Length = 291

 Score = 82.7 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 101/269 (37%), Gaps = 20/269 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +++   + A+  + ++              Y + D     V+    P+     AS+TKLM
Sbjct: 2   LKKLCSLFALLPVVSM-----------AQSYVVYDFTHDRVLESRSPNSVQPIASVTKLM 50

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           TA V     + +   ++      ++A     +++     + ++    LK ++V S N  A
Sbjct: 51  TANVFLENNQNRNCAISITD---EDADYIKGTSTKLPTYTPISCQELLKAMLVHSDNYAA 107

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A++ +   +  +F+Q MN  ++ LG+ +T F ++ G+      +    + +  + +   
Sbjct: 108 HALSRAAGMSRTQFIQKMNEKARELGMRSTRFSDSSGLSSANVSSVMDLVKLAKYSLGKS 167

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL---GADGMKTGFTCASGFNIVASA--IQG 235
             Q +       +    K     N           A   KTG+   SG+N+V        
Sbjct: 168 QIQVLSNMAAAYIHAGRKNIFVKNTNKLVREELFSAAINKTGYIRESGYNLVFINKQPCN 227

Query: 236 DQSLIAVILGALDRNTRNKVSA-SLLSMG 263
             ++  + L       R++ +   L   G
Sbjct: 228 SATIGVISLNNSSSAYRSQFTKNKLEQYG 256


>gi|47570691|ref|ZP_00241288.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
 gi|47552642|gb|EAL11096.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
          Length = 259

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 27/209 (12%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           TG ++ E  PD     AS++KL+  Y V   +KE K    T + IS  A E   +N    
Sbjct: 43  TGKILHEQNPDELLAIASMSKLIVVYAVLEAIKEGKITWDTKVNISDYAYEVSRNNEFSN 102

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQHMNNTSKNLGLSATHFM 153
                     ++ L        A   + +L +    +EK F+   N  +K LGL    F+
Sbjct: 103 VPFEKGRQYTVRELYHSIVIFSANGSSIALAELLAGSEKNFLNLANEHAKKLGLKKYKFV 162

Query: 154 NAHGV--------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---- 195
           NA G+                  +  +ARDM ILS  + T +P+ +   + +        
Sbjct: 163 NATGLNNADLKGKHPEGTDPNAENSMSARDMGILSKAMITKYPEMLEDTKQRFRNFPDNH 222

Query: 196 -KGKKYPNTNWA----VGTFLGADGMKTG 219
            K  +  N NW        + G +G+KTG
Sbjct: 223 PKPIRMENWNWMLPGAAFAYEGTNGLKTG 251


>gi|325473431|gb|EGC76626.1| hypothetical protein HMPREF9353_02421 [Treponema denticola F0402]
          Length = 303

 Score = 82.7 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 3/188 (1%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           FL + + +   N               Y L+  NTG ++AE+  D    PASLTKL+T Y
Sbjct: 76  FLPVKSSSSEINPSTQKIELPKIDADSYILIHANTGTILAESNADKIIPPASLTKLVTIY 135

Query: 64  VVFSFLKEKKAM--LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
            +    + K     +  P            +     +  +++++  ++ + V S ND A+
Sbjct: 136 TMLQKPEFKDLKKVVFPPKEAWAIFLPKGAAWMGLGENQSLSIEELIRGMAVCSGNDAAL 195

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A A     + +KF   MN   K +GL +T F ++ G+    + TTARD A+ S      +
Sbjct: 196 AAALLTEGSLEKFTLKMNEAVKTMGLKSTRFEDSSGL-SEKNQTTARDFALFSLHYLKQY 254

Query: 182 PQYMHYFQ 189
           P+ +  F 
Sbjct: 255 PENLKKFH 262


>gi|291439005|ref|ZP_06578395.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291341900|gb|EFE68856.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 853

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 132/360 (36%), Gaps = 36/360 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN--------TGH---------VIAENY 46
            L++I  A++ N+ P  +             + +        +G              + 
Sbjct: 463 LLLVIVFAIVQNVRPLPAPTLELTAQDSYTFEGDKVDIPWPASGQAALDVQGIGTFGSSG 522

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY+V      K       I I + A +       S      G  +
Sbjct: 523 EQKPVPIASVAKVMTAYLVLRDHPLKSGAEGPMIKIDELAEKQSDAGDESTVDVTAGDEI 582

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   A++ +++ SAN++A  +A     +E+ FV+ MN  +K+LG++ T + +  G+    
Sbjct: 583 SQREAIEAVLIASANNVARLLARWDAGSEEAFVEKMNEAAKDLGMTDTTYTDPSGLNNTT 642

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+               +   + KGK +PN N  VG+  G  G+KTG T 
Sbjct: 643 -VSTAVDQVKLAKAAMQQPVFREVAAMMSYDDYKGKNWPNWNQLVGSN-GVVGIKTGTTT 700

Query: 223 ASGFNIVASAIQ---GDQSLI--AVILGALDRNTRNKVSAS------LLSMGFYNKTDRK 271
           ++  N+V +A +   G+  LI  AV+           +SA+      L+           
Sbjct: 701 SALGNLVFAAKKEVDGETRLIIGAVVRQPAGGKENTILSAALTSSDLLIRAAQGALESAT 760

Query: 272 KINYIIKDFYQQNLSN--EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +       Y  +         ++E+V       ++         D         K+  L
Sbjct: 761 ILKKGTVVGYVDDGLGGRTPVAVTEDVEAVGWAGLSVKLTFAADDDLPHQAEAGTKVGTL 820


>gi|239930641|ref|ZP_04687594.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 855

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 72/360 (20%), Positives = 132/360 (36%), Gaps = 36/360 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN--------TGH---------VIAENY 46
            L++I  A++ N+ P  +             + +        +G              + 
Sbjct: 465 LLLVIVFAIVQNVRPLPAPTLELTAQDSYTFEGDKVDIPWPASGQAALDVQGIGTFGSSG 524

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY+V      K       I I + A +       S      G  +
Sbjct: 525 EQKPVPIASVAKVMTAYLVLRDHPLKSGAEGPMIKIDELAEKQSDAGDESTVDVTAGDEI 584

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   A++ +++ SAN++A  +A     +E+ FV+ MN  +K+LG++ T + +  G+    
Sbjct: 585 SQREAIEAVLIASANNVARLLARWDAGSEEAFVEKMNEAAKDLGMTDTTYTDPSGLNNTT 644

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+               +   + KGK +PN N  VG+  G  G+KTG T 
Sbjct: 645 -VSTAVDQVKLAKAAMQQPVFREVAAMMSYDDYKGKNWPNWNQLVGSN-GVVGIKTGTTT 702

Query: 223 ASGFNIVASAIQ---GDQSLI--AVILGALDRNTRNKVSAS------LLSMGFYNKTDRK 271
           ++  N+V +A +   G+  LI  AV+           +SA+      L+           
Sbjct: 703 SALGNLVFAAKKEVDGETRLIIGAVVRQPAGGKENTILSAALTSSDLLIRAAQGALESAT 762

Query: 272 KINYIIKDFYQQNLSN--EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
            +       Y  +         ++E+V       ++         D         K+  L
Sbjct: 763 ILKKGTVVGYVDDGLGGRTPVAVTEDVEAVGWAGLSVKLTFAADDDLPHQAEAGTKVGTL 822


>gi|293367840|ref|ZP_06614486.1| penicillin-binding protein 4 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291318031|gb|EFE58431.1| penicillin-binding protein 4 [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 422

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 70/326 (21%), Positives = 134/326 (41%), Gaps = 34/326 (10%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
           P    +    G V+ + + +   +PAS+TKLMT Y+ F  L   K      I I+ +  +
Sbjct: 51  PKAMTITDENGQVLYDYHGETSSDPASITKLMTLYLTFDALNNGKISKDQKIKITSDYEK 110

Query: 89  YPP----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                  S    KKG T T+D  +K + + S+N   + + E +  +  KF   MN  +K 
Sbjct: 111 MSALPNLSTVKLKKGQTYTIDEIMKQVSLASSNPATLILGEKIDGSTSKFTDRMNEKAKE 170

Query: 145 LGLSATHFMNAHG--------------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           LG++ THF N  G                +    TT++D+++L   +    P+ ++Y ++
Sbjct: 171 LGMNHTHFTNPSGASNDLLKPYEPKKYKDEAKTKTTSQDISLLIHSLLKKHPEVINYTKL 230

Query: 191 KGLEIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
              +   + +  TN         +LG DG+KTG T   G++I  +  Q    L A IL  
Sbjct: 231 THGKQYNQDFETTNLSLKGEPEEYLGTDGLKTG-TSDEGYSIALTNNQDHLRLNATILDV 289

Query: 247 L------DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
                   ++ RN+++  ++       T  K ++          +  +   +S+++  T 
Sbjct: 290 KPYPSEQAKHVRNQIANHMIEDLRKEYTYTKVMSKGTH-----KIDGKEITVSKDLYDTV 344

Query: 301 KEIINYNTQMKEAKDKESHFIDFEKI 326
            +  +  +      ++       + I
Sbjct: 345 PKNKDKWSLKVNKDNQVYVSYPRKFI 370


>gi|467182|gb|AAA17340.1| L308_F1_36 [Mycobacterium leprae]
          Length = 228

 Score = 82.3 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 7/178 (3%)

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++S ND A ++A  L   ++   + +N  +  LG   T      G+   G  T+A D+ +
Sbjct: 1   MQSGNDAAHSLAMQLGGMQQALQK-INVLAAKLGGQDTRVATPSGLDGPGMSTSAYDIGL 59

Query: 173 LSWRIKTDFPQYMHYFQIKGL-----EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                  +                  +  G +  N N  +  + GA G KTG+T  +G  
Sbjct: 60  FYRYAWQNPSFSNIVATRTFNFPGPGDHPGYQLENDNQLLYQYPGALGGKTGYTDDAGQT 119

Query: 228 IVASAIQGDQSLIAVIL-GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
            V +A +  + L+AV+L G        + +A LL  GF      +    I  D     
Sbjct: 120 FVGAANRNGRRLMAVLLHGTRQPIAPWEQAAHLLDYGFSTAVGTQIGTLIEPDPTVAG 177


>gi|298230061|ref|ZP_06963742.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pneumoniae str.
           Canada MDR_19F]
          Length = 283

 Score = 82.3 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 83/237 (35%), Gaps = 28/237 (11%)

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAI 172
           +  +EK FV  M       G+     +N  G+                  +  +A D+AI
Sbjct: 1   MAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYDVAI 60

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADGMKTGFTCASGFNI 228
           ++  +   +PQ +   +       G    +TN+ +        G DG+KTG T  +G + 
Sbjct: 61  VARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESF 120

Query: 229 VASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYII------K 278
           V + ++    +I V+L A     +   R   ++SL+       T RK +           
Sbjct: 121 VGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQDSKA 180

Query: 279 DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
                          E++   ++     +  ++   D ++     E  T++ +   +
Sbjct: 181 PVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAISAPLEAGTVVGHLTYE 237


>gi|261867997|ref|YP_003255919.1| DacC protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413329|gb|ACX82700.1| DacC protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 292

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 102/259 (39%), Gaps = 10/259 (3%)

Query: 12  MLSNIFPFLSIAETNK-LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ML  +FP L +         Y + D     V+  + P+     AS+TKLMTA V     K
Sbjct: 1   MLKKVFPSLFLLPAVAMAQSYVVYDFTHNKVLESSAPNTVRPIASVTKLMTANVFLEHNK 60

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
             +   +       +      + +   K + ++    LK+++V S N  A A++ S   T
Sbjct: 61  NPRCTASITD---DDYDYIKGTRTKLPKYTPISCRELLKMMLVHSDNYAAHALSRSAGMT 117

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
             +F+  MN  ++ LG+ +T F ++ G+  H   +    + +  + +     +       
Sbjct: 118 RLQFIGKMNEKARQLGMKSTCFSDSSGLSTHNVSSAMDLVKLTKYSMSKPEIKAFSNLSS 177

Query: 191 KGLEIKGKK--YPNTNW-AVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LG 245
             ++   +     NTN         A   KTG+   SG+N+V       +++ I VI L 
Sbjct: 178 TYVQAGKRSVFVKNTNKLVRDEMFSAAINKTGYIRESGYNLVFVNKVPCNRATIGVISLN 237

Query: 246 ALDRNTRNKVSA-SLLSMG 263
                 R+  +   L   G
Sbjct: 238 NSSSAYRSSFTKNKLEKYG 256


>gi|4240003|dbj|BAA74787.1| D-alanyl-D-alanine carboxypeptidase [Clostridium perfringens]
          Length = 183

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 8/184 (4%)

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S   F+ G  +T+   L  L+ KS ND A+AIAE +  + + F   MN+ ++ LGL 
Sbjct: 4   IRGSKVGFRAGEKVTMRELLFGLMYKSGNDAAIAIAEHIGGSIENFSILMNDFARMLGLK 63

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTN 204
            ++F + HG+    H+++A D+A+L      + P +      K +  +       Y N N
Sbjct: 64  DSNFQSPHGLDSQMHFSSAYDLAVLMS-KAMEEPFFREISGTKEVGAEKYNFTRSYSNIN 122

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
             +     A+G KTG+T  +G  +V+S     +++I V+L       R + +  +     
Sbjct: 123 KMLWRLPNANGGKTGYTGQAGKCLVSSVDHNGRNIIIVVLNCPT---RWEATERVYEYVK 179

Query: 265 YNKT 268
            N +
Sbjct: 180 ANYS 183


>gi|229017877|ref|ZP_04174760.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
 gi|228743468|gb|EEL93585.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
          Length = 272

 Score = 81.9 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 12/218 (5%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           MT Y+V   L + K  L   + I     +   S          T+ + L  L++   N  
Sbjct: 1   MTEYIVMEQLHDGKIQLDESVKIRNEVFQTETSPIQVTSKDNTTVRDLLHALLLTGNNRS 60

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF----MNAHGVVQHGHYTTARDMAILSW 175
           A+A+AE +   E  F   MN  +K L LS           +        TTA D A ++ 
Sbjct: 61  ALALAEHIAGNEDNFTSLMNEKAKQLKLSQQSPFLNSTGINSEKNRQSITTAIDAAEIAA 120

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------LGADGMKTGFTCASGFN 227
           ++  D+P  ++  +        K     N     +           DG+++  +    ++
Sbjct: 121 QLIKDYPDVLNITKQTSYRFTFKDVQVFNTNKMIYSLNKNIKLKDVDGLQSSLSTNGNYS 180

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            V++A QGD   I+V+L A + NT    +  LL  GF 
Sbjct: 181 FVSTANQGDTRFISVVLDANEENTAFVETKKLLQYGFE 218


>gi|171912390|ref|ZP_02927860.1| Serine-type D-Ala-D-Ala carboxypeptidase [Verrucomicrobium spinosum
           DSM 4136]
          Length = 325

 Score = 81.6 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 109/303 (35%), Gaps = 42/303 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPY-YTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           MR+     A  +   +    + A T         +D     +  E   +       LTK+
Sbjct: 11  MRR---SFAKLLSVTVVACFAGASTVHAQSSVIAVDVYNKKIHVEAGGNLKRPVGGLTKM 67

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS-TFKKGSTMTLDNALKLLIVKSAND 118
            TA V   + +  K  L T  T+S  A +    N      G  +TL + L   ++ S N 
Sbjct: 68  ATALVALDWSEATKVPLNTLATVSPEALQIAGMNPLQLVPGDQITLRDLLYASMMSSDNV 127

Query: 119 IAVAIAESLCKTE-----------KKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--HYT 165
            A  +A  + +               FV  MN  +   G+  T F N HG+       Y+
Sbjct: 128 AATTLALFVGQDINYRRGRTGDPLAAFVTEMNYLAAREGMVNTKFTNPHGLENSRSVPYS 187

Query: 166 TARDMAILSWRIKTD-FPQYMHYFQIKGLEI------KGKKYPNTNWAVGTFLGADGMKT 218
           TA DMA LS    +    ++    + + + +            NTN  +G  +  DG+KT
Sbjct: 188 TAADMARLSMYAISRAPFRFYTNQKTRNITVLRGGQPVSVPMQNTNALLGVGM-IDGIKT 246

Query: 219 GFTCASGFNIVAS-------AIQGDQ------SLIAVILGALDRNTRNKVSASLLSMGFY 265
           G T  SG  ++ S       A +  +       ++ V+LG+ D       +  LL   + 
Sbjct: 247 GNTPRSGGCVIVSEERRGTIAKENGREVLYRHRMVTVVLGSADP---FAETQGLLQQAWG 303

Query: 266 NKT 268
              
Sbjct: 304 VYD 306


>gi|320010214|gb|ADW05064.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           flavogriseus ATCC 33331]
          Length = 893

 Score = 81.6 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 111/285 (38%), Gaps = 20/285 (7%)

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTLDNA 107
             AS+ K+MTAYV+              I +     + A+    S +  K+G   T    
Sbjct: 567 PVASVAKIMTAYVILQGHPITGKEDGEQIEVDAKAGEEANRPDESTAPIKEGQKYTQRQM 626

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           L+LL++ S N++A  +A     TEK FV+ MN  +K+LG++ + + +  G+      T A
Sbjct: 627 LQLLMIPSGNNVARLLARWDATTEKAFVEKMNAAAKDLGMTNSVYTDPSGLESTTRSTPA 686

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
             + +    ++ D  + +       +   GK   N N  +    G  G+KTG +  +G N
Sbjct: 687 DQLKLAKAVMQNDVFREIVNMPQAEIPGIGKMIYNNNNILLE-PGVSGIKTGSSTPAGGN 745

Query: 228 IVASAI--QGD--QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           +V +A        + +I  ++GA    T +      L          +    +I+     
Sbjct: 746 LVWTADTVIDGKSRRIIGAVMGADVDGTLDAKLQRAL----------QTSLALIQTAQDG 795

Query: 284 NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
             S  V     +V           T +   KD ++      ++ L
Sbjct: 796 VDSATVVK-KGQVVGYVDNGFGTRTPVVATKDLKAVGWGGLEVDL 839


>gi|326778695|ref|ZP_08237960.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           cf. griseus XylebKG-1]
 gi|326659028|gb|EGE43874.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 890

 Score = 81.6 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 120/343 (34%), Gaps = 40/343 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------------------YYTLLDTNTGHVIAE 44
            L++I  A++  + P    +                            ++D   G  +  
Sbjct: 498 LLLLIVFAIVQVMRPLPEPSLQLTAKPTYTFEGGEAKLSWPGQGQSAVMVDGV-GS-LGS 555

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----S 100
                P   AS+ K+MTA+V+      K       IT+ + A +                
Sbjct: 556 EGAQKPAPIASVAKVMTAHVILQEHPLKGDEEGETITVDQKAEDESQRPDESTAPLTKGQ 615

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +T    L+LL++ S N+ A  +A     +E  F+  MN+ +K+LG++ + + +  G+ +
Sbjct: 616 KLTQRQMLQLLMIPSGNNAARLLARWDAGSEDAFIDKMNDAAKDLGMTGSTYTDPSGLEK 675

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T    + +    ++ +  + +       ++    K  N N  +    G  G+KTG 
Sbjct: 676 TTVSTATDQLKLAQAVMRNEVFRKIVDMPEVEIKGIDGKIYNNNNLLLQ-PGVSGIKTGS 734

Query: 221 TCASGFNIVASAI--QGDQSL--IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           +  +G N++ SA      + L     ++G      R   S  L           +    +
Sbjct: 735 STPAGGNLLWSANTKVDGKLLWIYGAVMGQQAGTGRVYDSLEL---------SLQNSLKL 785

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           IKD  +   S  V     +V           T +   K+ ++ 
Sbjct: 786 IKDAQKAATSATVVK-KGDVVGYVDNGFGGQTPVVATKNLKAV 827


>gi|182438052|ref|YP_001825771.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178466568|dbj|BAG21088.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 914

 Score = 81.6 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 120/343 (34%), Gaps = 40/343 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------------------YYTLLDTNTGHVIAE 44
            L++I  A++  + P    +                            ++D   G  +  
Sbjct: 522 LLLLIVFAIVQVMRPLPEPSLQLTAKPTYTFEGGETKLSWPGQGQSAVMVDGV-GS-LGS 579

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG----S 100
                P   AS+ K+MTA+V+      K       IT+ + A +                
Sbjct: 580 EGAQKPAPIASVAKVMTAHVILQEHPLKGDEEGETITVDQKAEDESQRPDESTAPLTKGQ 639

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +T    L+LL++ S N+ A  +A     +E  F+  MN+ +K+LG++ + + +  G+ +
Sbjct: 640 KLTQRQMLQLLMIPSGNNAARLLARWDAGSEDAFIDKMNDAAKDLGMTGSTYTDPSGLEK 699

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T    + +    ++ +  + +       ++    K  N N  +    G  G+KTG 
Sbjct: 700 TTVSTATDQLKLAQAVMRNEVFRKIVDMPEVEIKGIDGKIYNNNNLLLQ-PGVSGIKTGS 758

Query: 221 TCASGFNIVASAI--QGDQSL--IAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           +  +G N++ SA      + L     ++G      R   S  L           +    +
Sbjct: 759 STPAGGNLLWSANTKVDGKLLWIYGAVMGQQAGTGRVYDSLEL---------SLQNSLKL 809

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
           IKD  +   S  V     +V           T +   K+ ++ 
Sbjct: 810 IKDAQKAATSATVVK-KGDVVGYVDNGFGGQTPVVATKNLKAV 851


>gi|227432674|ref|ZP_03914647.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227351556|gb|EEJ41809.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 444

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 38/280 (13%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +          ++D  TG ++ +         AS +K++TAY V   +K  K   +T 
Sbjct: 49  QPVQLNTSATSALVVDLTTGQILGQKNSSKQVAIASQSKMLTAYGVLKSIKSGKIKWSTM 108

Query: 80  ITISKNASEYPPSNSTF-----KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           + I+  +      +  F     K G  +++     ++   SAND A A+ E +    +  
Sbjct: 109 VPITSKSDLSKEDSHMFSHIAIKAGDKVSVRELYDVMFANSANDAAFALGEFVTPKGETT 168

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHY-----------------------------T 165
            Q + + +K L LS + + N+ G V    +                              
Sbjct: 169 QQTLESWAKELHLSGSQWYNSAGQVNENTFENEISSAPKTASNKASNQQLAMIARAILEL 228

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
                 +      +           K    +       N +    L  +G+KTG +  SG
Sbjct: 229 DPSLRQLSKKLTISYHMTPNFVVTDKTDYWQLMTETMPNLSNPNQLTIEGLKTGSSPESG 288

Query: 226 FNIVASA-IQGDQSLIAVILGAL---DRNTRNKVSASLLS 261
                    +     I V+ G     D   R + S  ++ 
Sbjct: 289 AGFTGLIKDKNGHEFITVVNGIANYMDETKRYQESLRIVD 328


>gi|116617478|ref|YP_817849.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
 gi|116096325|gb|ABJ61476.1| D-alanyl-D-alanine carboxypeptidase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 444

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 38/280 (13%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +          ++D  TG ++ +         AS +K++TAY V   +K  K   +T 
Sbjct: 49  QPVQLNTSATSALVVDLTTGQILGQKNSSKQVAIASQSKMLTAYGVLKSIKSGKIKWSTM 108

Query: 80  ITIS-----KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           + I+          +  S+   K G  +++     ++   SAND A A+ E +    +  
Sbjct: 109 VPITSKADLSKEDSHLFSHIAIKAGDKVSVRELYDVMFANSANDAAFALGEFVTPKGETT 168

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHY-----------------------------T 165
            Q + + +K L LS + + N+ G V    +                              
Sbjct: 169 QQALESWAKELHLSGSQWYNSAGQVNENAFENEISSAPKTASNKASNQQLAMIARAILEL 228

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
                 +      +           K    +       N +    L  +G+KTG +  SG
Sbjct: 229 DPSLRQLSKKLTISYHMTPNFVVTDKTDYWQLMTETMPNLSNPNQLTIEGLKTGSSPESG 288

Query: 226 FNIVASA-IQGDQSLIAVILGAL---DRNTRNKVSASLLS 261
                    +     I V+ G     D   R + S  ++ 
Sbjct: 289 AGFTGLIKDKNGHEFITVVNGIANYMDETKRYQESLRIVD 328


>gi|266625856|ref|ZP_06118791.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288862244|gb|EFC94542.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 239

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 17/155 (10%)

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           F + MN  +K LG + ++F+N  G+    HYTTA DMA+++     ++P+ +     +  
Sbjct: 1   FAKLMNKKAKELGCTGSNFVNPSGLNDPDHYTTAYDMALIARSAL-NYPEIVEIMGTRVY 59

Query: 194 EIKG-------------KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
           +I                K    N          G KTGFT  +   +V  A + D +LI
Sbjct: 60  KIPPSKKAPEGQTISPGHKMLKKN-DSAYDPRVFGGKTGFTSLADNTLVTYAKKDDMTLI 118

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           +VIL      T    +  LL  GF     +K  +Y
Sbjct: 119 SVILN--GHQTHYTDTKKLLDFGFSQFESKKLADY 151


>gi|297197634|ref|ZP_06915031.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
 gi|297146814|gb|EFH28363.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
          Length = 223

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 3/151 (1%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +          + + D ++G V+A +       PAS  K + A  V   L      L   
Sbjct: 66  VPRVPDVSALSWVVADADSGEVLAAHDAHRRLPPASTLKTLFALTVLPVLPGG---LRHT 122

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +  ++ A   P S+              L   +  ++ + AV +   L          M 
Sbjct: 123 VGANELADIEPGSSLVGVAEGQTYQVADLWRGVFLNSGNDAVHVLAGLSGGWSTTAARMQ 182

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             ++ LG   T+  +  G    G  ++A D+
Sbjct: 183 AKARALGARDTYVRSPDGYDTPGQVSSAYDL 213


>gi|289805534|ref|ZP_06536163.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 140

 Score = 81.2 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 15  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 74

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           TK+MT+YV+   +K  K   T  +T+  +A   
Sbjct: 75  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWAT 107


>gi|297159756|gb|ADI09468.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           bingchenggensis BCW-1]
          Length = 786

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 12/209 (5%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTM 102
              P   AS+TK+MTAYVV      K +     I I   A +       S     +G T 
Sbjct: 452 AQKPVPIASVTKVMTAYVVLKEHPLKVSEEGPTIKIDAQAGKESGSEDESRVEVDEGQTY 511

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
                L++L++ S N+IA  +A     +E+ FV+ MN+ +K+LG+  T + +  G     
Sbjct: 512 NELQMLQMLLIPSGNNIARQLARWDSGSEEAFVKKMNDAAKDLGMKNTVYTDPSGFKATT 571

Query: 163 HYT---TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
             T     +    +               +I GL+    K  N N  +    G  G+KTG
Sbjct: 572 KSTASDQLKLARAVMKSEAFRSVVATPNIRIPGLKTPDSKIYNNNNLLVK-PGVVGIKTG 630

Query: 220 FTCASGFNIVASAIQ---GDQSLI-AVIL 244
            +  +G  ++  A +   G++ LI  V+L
Sbjct: 631 SSTPAGGALMWGAEKTVDGNKRLILGVVL 659


>gi|91228812|ref|ZP_01262719.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 12G01]
 gi|91187617|gb|EAS73942.1| D-alanyl-D-alanine carboxypeptidase [Vibrio alginolyticus 12G01]
          Length = 125

 Score = 80.8 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 6  VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
          V ++     +       +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15 VALSATFAQSALASPIVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63 YVVFSFLKEKKAMLTTPITISKNAS 87
          YV+   L          +TISKNA 
Sbjct: 75 YVIGQELARGNISEDDDVTISKNAW 99


>gi|307260895|ref|ZP_07542581.1| hypothetical protein appser12_4660 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869462|gb|EFN01253.1| hypothetical protein appser12_4660 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 273

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 95/242 (39%), Gaps = 9/242 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y + D     ++     ++    AS+TKLMTA +     K K    +      ++  
Sbjct: 18  AQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISD---QDFD 74

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               + +   K + +  D  LK ++V S N  A A++ S   +  +F+Q MN  ++ LG+
Sbjct: 75  HIKGTGTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGM 134

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
            +T F ++ G+      +    + +  + +     Q +   +   + +  +     N + 
Sbjct: 135 RSTRFSDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSA 194

Query: 208 GTFL---GADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLS 261
                   A   KTG+   SG+N+V       + + I VI L      TR+  +   L  
Sbjct: 195 LVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRSSATRSTFTKNKLEQ 254

Query: 262 MG 263
            G
Sbjct: 255 YG 256


>gi|260898942|ref|ZP_05907383.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
          parahaemolyticus Peru-466]
 gi|308089342|gb|EFO39037.1| serine-type D-Ala-D-Ala carboxypeptidase DacC [Vibrio
          parahaemolyticus Peru-466]
          Length = 123

 Score = 80.4 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 6  VIIAMAMLSNIFPF---LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
          V ++     + F     +  A       Y L+D ++G V+AE   +   +PASLTK+MT+
Sbjct: 15 VALSATFAQSAFASPVVVPDAPQIAAKGYVLMDYHSGKVLAEKEMNTKLSPASLTKMMTS 74

Query: 63 YVVFSFLKEKKAMLTTPITISKNAS 87
          YV+   L          +TISKNA 
Sbjct: 75 YVIGQELARGNISEDDDVTISKNAW 99


>gi|315634259|ref|ZP_07889546.1| serine-type D-Ala-D-Ala carboxypeptidase [Aggregatibacter segnis
           ATCC 33393]
 gi|315476849|gb|EFU67594.1| serine-type D-Ala-D-Ala carboxypeptidase [Aggregatibacter segnis
           ATCC 33393]
          Length = 292

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 103/242 (42%), Gaps = 9/242 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y + D     ++  + P      AS+TKLMTA V     K  +   +      ++A 
Sbjct: 18  AQSYVVYDFTHNKILESSSPHSVRPIASVTKLMTANVFLEHNKNARCTASITA---EDAD 74

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               +++   + + ++ +  LK ++V S N  A A++ S   + ++F++ MN+ ++ LG+
Sbjct: 75  HIKGTSTKLPRYTPISCNELLKAMLVHSDNYAAHALSRSAGMSRQQFIKKMNDKARALGM 134

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY--PNTNW 205
           ++THF ++ G+      +    + +  + +     + +       ++   +     NTN 
Sbjct: 135 TSTHFSDSSGLSNSNVSSVMDLVKLAKYSLNNAEIKRLSNISSTYIQTGKRNIFVKNTNK 194

Query: 206 -AVGTFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLS 261
                   A   KTG+   SG+N+V       +++ I VI L  +    R+  +   L  
Sbjct: 195 LVRDEMFSAAINKTGYIRESGYNLVFVNKVPCNRATIGVISLNNISSAYRSSFTKSKLEK 254

Query: 262 MG 263
            G
Sbjct: 255 YG 256


>gi|213024102|ref|ZP_03338549.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 77

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
          +++   A                   + L+D  +G V+AE   D   +PASLTK+MT+YV
Sbjct: 16 VLLFLFASPVKAEEQTIAPPGVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYV 75

Query: 65 V 65
          V
Sbjct: 76 V 76


>gi|307249643|ref|ZP_07531629.1| hypothetical protein appser4_4530 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858341|gb|EFM90411.1| hypothetical protein appser4_4530 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 273

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 95/242 (39%), Gaps = 9/242 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y + D     ++     ++    AS+TKLMTA +     K K    +      ++  
Sbjct: 18  AQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISD---QDFD 74

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               + +   K + +  D  LK ++V S N  A A++ S   +  +F+Q MN  ++ LG+
Sbjct: 75  HIKGTGTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGM 134

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
            +T F ++ G+      +    + +  + +     Q +   +   + +  +     N + 
Sbjct: 135 RSTRFSDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSA 194

Query: 208 GTFL---GADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLS 261
                   A   KTG+   SG+N+V       + + I VI L      TR+  +   L  
Sbjct: 195 LVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRSSATRSTFTKNKLEQ 254

Query: 262 MG 263
            G
Sbjct: 255 YG 256


>gi|153827672|ref|ZP_01980339.1| penicillin-binding protein 6 [Vibrio cholerae MZO-2]
 gi|149737857|gb|EDM52762.1| penicillin-binding protein 6 [Vibrio cholerae MZO-2]
          Length = 161

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 3/120 (2%)

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           MKTG+T  +G+++ +SA  G+  LI+V++G+    +R   S  LLS GF           
Sbjct: 1   MKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQK 60

Query: 276 ---IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              I          NEV   S +         +        +  ++      K  ++ + 
Sbjct: 61  DSVIQNQRLWYGDKNEVALGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSI 120


>gi|167765525|ref|ZP_02437589.1| hypothetical protein CLOSS21_00019 [Clostridium sp. SS2/1]
 gi|167712710|gb|EDS23289.1| hypothetical protein CLOSS21_00019 [Clostridium sp. SS2/1]
          Length = 311

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 22/252 (8%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     L++     VI          PAS TK+MTA +           L+  +TI  + 
Sbjct: 62  EAKEVLLVNNTKNKVIVSQKVFDQAYPASTTKIMTALLTLEN-----LNLSQVVTIKHDI 116

Query: 87  SEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +           KKG  +T++  L  LI+ SAND AVA+ E++  +E  FV+ MN  +K 
Sbjct: 117 TFPDGAAVAIHLKKGDKITVEALLNALIIMSANDAAVALGEAVAGSEANFVKMMNKRAKE 176

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQIKGLEI 195
           LG + THF N +G+    HY+TA D+ ++   +      +         + Y   KG + 
Sbjct: 177 LGATNTHFANPNGLHLSDHYSTAYDLYLIFKEVAKHNEFFNIAGRSSSRIEYLGSKGEQK 236

Query: 196 KGKKYPNTNWAVGTFL-----GADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDR 249
                    +  GT+         G KTG T  +G  ++     +  +  I+V+L  + +
Sbjct: 237 IYDMASTNQYIAGTYTLPSQVYMIGGKTGTTTQAGSCLILLTKNKDGEEFISVVLKGVTK 296

Query: 250 NTRNKVSASLLS 261
           +        +LS
Sbjct: 297 SALYHTMTDILS 308


>gi|190149713|ref|YP_001968238.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249783|ref|ZP_07335987.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303252663|ref|ZP_07338826.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245252|ref|ZP_07527343.1| hypothetical protein appser1_4600 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247423|ref|ZP_07529470.1| hypothetical protein appser2_4190 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251972|ref|ZP_07533873.1| hypothetical protein appser6_4920 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254199|ref|ZP_07536044.1| hypothetical protein appser9_4520 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307256466|ref|ZP_07538248.1| hypothetical protein appser10_4720 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307258664|ref|ZP_07540399.1| hypothetical protein appser11_4650 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307263022|ref|ZP_07544644.1| hypothetical protein appser13_4450 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914844|gb|ACE61096.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302648631|gb|EFL78824.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651350|gb|EFL81502.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306853896|gb|EFM86110.1| hypothetical protein appser1_4600 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306856120|gb|EFM88276.1| hypothetical protein appser2_4190 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860664|gb|EFM92676.1| hypothetical protein appser6_4920 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862899|gb|EFM94848.1| hypothetical protein appser9_4520 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865096|gb|EFM96997.1| hypothetical protein appser10_4720 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306867321|gb|EFM99174.1| hypothetical protein appser11_4650 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306871648|gb|EFN03370.1| hypothetical protein appser13_4450 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 273

 Score = 80.4 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 95/242 (39%), Gaps = 9/242 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y + D     ++     ++    AS+TKLMTA +     K K    +      ++  
Sbjct: 18  AQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISD---QDFD 74

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               + +   K + +  D  LK ++V S N  A A++ S   +  +F+Q MN  ++ LG+
Sbjct: 75  HIKGTGTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGM 134

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
            +T F ++ G+      +    + +  + +     Q +   +   + +  +     N + 
Sbjct: 135 RSTRFSDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSA 194

Query: 208 GTFL---GADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLS 261
                   A   KTG+   SG+N+V       + + I VI L      TR+  +   L  
Sbjct: 195 LVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRSSATRSTFTKNKLEQ 254

Query: 262 MG 263
            G
Sbjct: 255 YG 256


>gi|311110173|ref|ZP_07711570.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus gasseri
           MV-22]
 gi|311065327|gb|EFQ45667.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus gasseri
           MV-22]
          Length = 201

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 21/173 (12%)

Query: 1   MRQ-------FLVIIAMAMLSNIFPFLSIAETNK----------LPYYTLLDTNTGHVIA 43
           MR+        + ++   ++  I P    A +                  +D  +G V+ 
Sbjct: 17  MRKYKVKWFSIISLLVCILIFWIKPITVKASSINNYHQEQVELQAKSAIAIDLKSGQVLY 76

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D     AS++KL+T Y+    +  KK      +  +K   +   +         + 
Sbjct: 77  AKNADKKLPVASMSKLITIYLTLDAINNKKLSWNQKVKPTKQIVKISNNPEYSGVPLKLN 136

Query: 104 LDNALKLLIV----KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
               +K L      +SAN  A+ + +++  +++ FV+ M N   +  +     
Sbjct: 137 HAYTIKQLYEATLIQSANGPAMLLGQAISGSQQAFVKKMRNQLVSWNIGGGQP 189


>gi|308234036|ref|ZP_07664773.1| D-alanyl-D-alanine carboxypeptidase [Atopobium vaginae DSM 15829]
 gi|328943433|ref|ZP_08240898.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae DSM
           15829]
 gi|327491402|gb|EGF23176.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae DSM
           15829]
          Length = 347

 Score = 80.0 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 81/229 (35%), Gaps = 11/229 (4%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
             Y  + D      +  +  D    PASL KLMT Y     ++    +        ++  
Sbjct: 94  SKYRYVYDITHRKEVINDDADVACAPASLVKLMTIYTALQHIQSLDQVAPIDKETFQHLL 153

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           +   S + F      T  + L   +++S  + A  +A     +   FV+ MN+ +  LGL
Sbjct: 154 DENASMAGFVADEQTTYKDLLYGTLLRSGGECATNLAIHTAGSVDAFVKKMNDNAHKLGL 213

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTD-----------FPQYMHYFQIKGLEIK 196
           SATH+ N  G+      + A D+  +      D           +         KG+ +K
Sbjct: 214 SATHYTNPTGLDDPNQISCAADVVKVFNACLQDKRFKEILTAQEYTSSKTNQHPKGITMK 273

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                +            G K+G T  +G   V    + +   I  ++G
Sbjct: 274 NNILSHITPEEQNGFKILGGKSGTTDNAGLCWVTLVTKNNVDYIVCVMG 322


>gi|94267082|ref|ZP_01290721.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [delta
           proteobacterium MLMS-1]
 gi|93452219|gb|EAT02875.1| Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 [delta
           proteobacterium MLMS-1]
          Length = 209

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 4/191 (2%)

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           ++SAND AVA+AE +   E+ F + M +  + +G + T   NA+G+   G  +TARD+A+
Sbjct: 21  MRSANDAAVALAEKIAGNERAFARLMTSKVRAMGANNTTLRNANGLTAQGQQSTARDLAL 80

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           +      + P+             G+    +N A+    G+ G KTGFT A+    V   
Sbjct: 81  ILH-RAMEHPELAQRLGTVSTNGLGQTMRTSNRALWQINGSQGGKTGFTRAAQQTYVGKF 139

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
            +G+  LI  ++G+            L++ GF    ++  +     D             
Sbjct: 140 QRGNHELIVALMGSTT---MWDDVRQLVNYGFQQIGNQALMAAAPVDPAFTRQPTATAAS 196

Query: 293 SEEVCTTQKEI 303
           S  V +   + 
Sbjct: 197 SLTVLSDAAKS 207


>gi|313900621|ref|ZP_07834114.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. HGF2]
 gi|312954683|gb|EFR36358.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium sp. HGF2]
          Length = 306

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 11/244 (4%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            + I+       Y L+      V+ +   +    PASLTKLMT Y     + + +  +  
Sbjct: 42  PIKISSELYSKNYILIRQKDSKVMLKEREEEAIAPASLTKLMTVYTALQHIDDLQKTVRI 101

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P +I     +   S + F     +T ++ +   ++ S  D  + +A SL  +E  FV  M
Sbjct: 102 PASIFPQLEKEQASMAGFLPDEEVTYEDLIYGALLPSGADACMTLAISLYGSEDAFVAEM 161

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----------SWRIKTDFPQYMHY 187
           N  ++ L L  T F N  G+ + GH ++ RD+A +                T++      
Sbjct: 162 NAQAEKLKLKQTRFQNCTGLDEAGHVSSVRDIAWILDEALKLPKFAEAFHATNYVMAPSN 221

Query: 188 FQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
              +G+ I        +    +     G KTG+T  +G  +   A   +++ + V   A 
Sbjct: 222 MHPEGMTIYSTMRMTMDQNELSQDDILGGKTGYTKKAGLCLATQARIHEETWLFVSAHAS 281

Query: 248 DRNT 251
              T
Sbjct: 282 GSAT 285


>gi|317498476|ref|ZP_07956770.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316894169|gb|EFV16357.1| D-alanyl-D-alanine carboxypeptidase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 322

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 22/252 (8%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     L++     VI          PAS TK+MTA +           L+  +TI  + 
Sbjct: 73  EAKEVLLVNNTKNKVIVSQKVFDQAYPASTTKIMTALLTLEN-----LNLSQVVTIKHDI 127

Query: 87  SEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +           KKG  +T++  L  LI+ SAND AVA+ E++  +E  FV+ MN  +K 
Sbjct: 128 TFPDGAAVAIHLKKGDKITVEALLNALIIMSANDAAVALGEAVAGSEANFVKMMNKRAKE 187

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQIKGLEI 195
           LG   THF N +G+    HY+TA D+ ++   +      +         + Y   KG + 
Sbjct: 188 LGAINTHFANPNGLHLSDHYSTAYDLYLIFKEVAKHNEFFNIAGRSSSRIEYLGSKGEQK 247

Query: 196 KGKKYPNTNWAVGTFL-----GADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDR 249
                    +  GT+         G KTG T  +G  ++     +  +  I+V+L  + +
Sbjct: 248 IYDMASTNQYIAGTYTLPSQVYMIGGKTGTTTQAGSCLILLTKNKDGEEFISVVLKGVTK 307

Query: 250 NTRNKVSASLLS 261
           +        +LS
Sbjct: 308 SALYHTMTDILS 319


>gi|295102720|emb|CBL00265.1| D-alanyl-D-alanine carboxypeptidase [Faecalibacterium prausnitzii
           L2-6]
          Length = 451

 Score = 79.6 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 121/375 (32%), Gaps = 42/375 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE--------TNKLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ + +    +L         +           +     +++T+T  ++ +        
Sbjct: 1   MKRIVTLFLSLILLLSCLCAPASAMFDPSLFYEVQAKSAYIVNTDTNIIVYDKDSSRQVP 60

Query: 53  PASLTKLMT-AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              LTK MT A ++ ++  +       P  IS         N+  +   T T   A+  +
Sbjct: 61  AGGLTKYMTIALLLTNYADQLDNTFQMPFAISDYVH--NSDNADMRSNETFTYREAVYAM 118

Query: 112 IVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           ++++AN+ A+ +A SL   +   +V  MN  S+ +G + + + +A G+      T     
Sbjct: 119 LLRNANEAAMGLAYSLSGGDLAGWVSQMNTLSQRIGTTGSTWTDACGLDSGNVTTAVDMY 178

Query: 171 AILSWRIKTDFPQYMH-----YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF----- 220
            IL + +  D    +          K    K     N N A+    G    +        
Sbjct: 179 LILRYLMSFDAFVDISSAPAFTMPAKEKHTKSFVLLNQNVALNKTSGGSFYRKSMQGGMC 238

Query: 221 ------TCASGFNIVASAIQGDQSLIAVILGALDRNTRN---------KVSASLLSMGFY 265
                       + V+ A Q   + I  I+ + D                +  L+   F 
Sbjct: 239 DVMAYKNDHGDQSYVSWANQDGSTYIFCIMQSPDTCDTYGYANRRPALYETTRLIDWVFQ 298

Query: 266 NKTDRKKIN---YIIKDFYQQNLSNEVPNISEE--VCTTQKEIINYNTQMKEAKDKESHF 320
           + + +  ++    + +   + +   +   +  +  + T      +     K     +   
Sbjct: 299 SFSIQPALDTDLALAEIPVKYSSDTDTLKLYPDNSMMTLLPSSGDGTVTQKYFHLPDYVC 358

Query: 321 IDFEKITLLKNKITK 335
              ++  ++     K
Sbjct: 359 APVQQGDVVGTVELK 373


>gi|291558993|emb|CBL37793.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SSC/2]
          Length = 322

 Score = 79.6 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 22/252 (8%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
           +     L++     VI          PAS TK+MTA +           L+  +TI  + 
Sbjct: 73  EAKEVLLVNNTKNKVIVSQKVFDQAYPASTTKIMTALLTLEN-----LNLSQVVTIKHDI 127

Query: 87  SEYPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
           +           KKG  +T++  L  LI+ SAND AVA+ E++  +E  FV+ MN  +K 
Sbjct: 128 TFPDGAAVAIHLKKGDKITVEALLNALIIMSANDAAVALGEAVAGSEANFVKMMNKRAKE 187

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY---------MHYFQIKGLEI 195
           LG + THF N +G+    HY+TA D+ ++   +      +         + Y   KG + 
Sbjct: 188 LGATNTHFANPNGLHLSDHYSTAYDLYLIFKEVAKHNEFFNIAGRSSSRIEYLGSKGEQK 247

Query: 196 KGKKYPNTNWAVGTFL-----GADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDR 249
                    +  GT+         G KTG T  +G  ++     +  +  I+V+L  + +
Sbjct: 248 IYDMASTNQYIAGTYTLPSQVYMIGGKTGTTTQAGSCLILLTKNKDGEEFISVVLKGVTK 307

Query: 250 NTRNKVSASLLS 261
           +        +LS
Sbjct: 308 SALYHTMTDILS 319


>gi|289673758|ref|ZP_06494648.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 151

 Score = 79.3 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 3/143 (2%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
            +                ++D  T  V+  + PD     AS+TKLMTA VV    +    
Sbjct: 12  AVLSRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAMVVLDAKQPMDE 71

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           ++   I+ +          S  K GS M   + L + ++ S N  A ++A S       F
Sbjct: 72  VIPVNISQTPE---MKGVFSRVKLGSEMNRRDMLLITLMSSENRAAASLAHSYPGGYPAF 128

Query: 135 VQHMNNTSKNLGLSATHFMNAHG 157
           +  MN  +K LG+  T ++   G
Sbjct: 129 ILAMNAKAKALGMKHTAYVEPTG 151


>gi|215447173|ref|ZP_03433925.1| D-alanyl-D-alanine carboxypeptidase dacB2 [Mycobacterium
           tuberculosis T85]
          Length = 219

 Score = 79.3 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++ A V           L + +      ++   +    K G + T    L  L++ S ND
Sbjct: 1   MLLALVALDE-----LDLNSTVVADVADTQAECNCVGVKPGRSYTARQLLDGLLLVSGND 55

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY--TTARDMAILSWR 176
            A  +A  +   +   V  MN  +  LG ++TH     G+   G    +TA D+ ++   
Sbjct: 56  AANTLA-HMLGGQDVTVAKMNAKAATLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRA 114

Query: 177 IKTDF---PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +            +   +   +   N +  +  + GA G KTG+T A+    V +A 
Sbjct: 115 AMANPVFAQITAEPSAMFPSDNGEQLIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAA 174

Query: 234 QGDQSLIAVILGA---LDRNTRNKVSASLLSMGFY 265
           +G + L+  ++         T    +A+L   GF 
Sbjct: 175 RGGRRLVIAMMYGLVKEGGPTYWDQAATLFDWGFA 209


>gi|213613286|ref|ZP_03371112.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 137

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 39  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 98

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           TK+MT+YV+   +K  K   T  +T+  +A   
Sbjct: 99  TKMMTSYVIGQAMKAGKFKETDLVTVGNDAWAT 131


>gi|329941308|ref|ZP_08290587.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
 gi|329299839|gb|EGG43738.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
          Length = 851

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 73/362 (20%), Positives = 130/362 (35%), Gaps = 35/362 (9%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLL---DTN----TG-----HVIA-----ENYP 47
           L+ I  A+  ++ P    A              DT+    +G      V+       +  
Sbjct: 464 LLAIVFAVAQSMRPLPDPALDLTAQSSYAFKGSDTDIPWPSGGQAALDVLGIGSYGSSGE 523

Query: 48  DHPWNPASLTKLMTAYVVFSFLK---EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             P   AS+TK+MTAY++         +   +         A+    S      G ++T 
Sbjct: 524 QKPAPIASVTKVMTAYLILKNHPLKGGEGEKIKVDQPAEDQATADGESTVKVHAGDSITE 583

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
             AL+ L++ SAN++A  +A     +EK FV  MN T+K LG++ T + +  G+ +    
Sbjct: 584 KEALQALLIASANNVARLVARWDAGSEKAFVAKMNTTAKQLGMTNTTYTDPSGL-EKTTV 642

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +TA D   L+     D         ++  + KG K+ N N  VG + G  G+KTG T A+
Sbjct: 643 STAVDQVKLAKAAMKDSSFRQIAAMMEYTDYKGDKHSNWNRLVG-YNGVVGIKTGTTTAA 701

Query: 225 GFNIVASAIQ---GDQSLI--AVILGALDRNTRN------KVSASLLSMGFYNKTDRKKI 273
           G N+V +A++   G    I  AV+                  S  L+     +      +
Sbjct: 702 GGNLVFAAVKKVGGQTRTIVGAVVGQGPGGEDNTILSGALDASDKLIRAAQASLESATIL 761

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKI 333
                     +       +   +    K +      +K     +      +    + +  
Sbjct: 762 KKGTVVGAVDDGLGGRTPV--VITKDVKAVGWAGLTVKLKFAADELPHTAKAGAKVGSLT 819

Query: 334 TK 335
             
Sbjct: 820 VG 821


>gi|29830324|ref|NP_824958.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces avermitilis
           MA-4680]
 gi|29607435|dbj|BAC71493.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           avermitilis MA-4680]
          Length = 888

 Score = 78.9 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 107/285 (37%), Gaps = 19/285 (6%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTL 104
            P   AS+ K+MTAYV+      K       IT+       +     S +   KG   T 
Sbjct: 557 APKPIASVAKIMTAYVILEEHPLKGTAAGDKITVDQQAEDESKNEDESTAAMTKGQKFTE 616

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              L++L++ S N+ A  +A     + + FV  MN  +K LG++ + + +  G+ +    
Sbjct: 617 RQMLQMLMIPSGNNAARLLARWDSDS-ETFVGKMNAAAKKLGMTNSTYTDPSGLEKTTVS 675

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T    + +    ++ +  + +       +        N N  +   +G  G+KTG +  +
Sbjct: 676 TATDQLKLAKAVMQKEVFRSIVGMAKADIPGLKGTIYNNNDLLVKQVGVIGLKTGSSTPA 735

Query: 225 GFNIVASAIQ--GD--QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDF 280
           G N+V +A +      +++   +L       R   S  L      N   +K I+      
Sbjct: 736 GGNLVWAATKTVNGKVRTIYGAVLNQDAGTGRVWDSLQL---ALTN--SQKLIDK----- 785

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            QQ L +       +V     + +   T +   ++  +      K
Sbjct: 786 VQQGLISAPVVKKGQVVGYVDDQLGGRTPVVATENMTAVGWPGLK 830


>gi|228979141|ref|ZP_04139487.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228780589|gb|EEM28810.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
          Length = 129

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 4/120 (3%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++F +++    ++ +    F         +     L++ N+G ++ +   + P   A+L
Sbjct: 4   LKKFAILLLSFFITALIVLYFYLYVNGPIIQAKSAILINANSGEIVYKKNEETPVQSATL 63

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           +KLMT Y+V   L ++K  L   + IS        S          T          +  
Sbjct: 64  SKLMTEYIVLEQLNDRKIQLDDFVQISNEVFRVETSPIQVTSNDKTTFVIYFMHCYWQGI 123


>gi|302543172|ref|ZP_07295514.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460790|gb|EFL23883.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 929

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/306 (18%), Positives = 116/306 (37%), Gaps = 20/306 (6%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTM 102
                  AS+TK+MTAYVV      K       I I     + +     S ++ K+G + 
Sbjct: 598 AQKAVPIASVTKVMTAYVVLKDHPLKAGAEGPRIEIDATAAEESGSADESRASVKEGQSF 657

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T    L+LL++ S+N+IA  +A     +   F + MN+ +K+LG+  T + +  G+ +  
Sbjct: 658 TQHQLLQLLLINSSNNIARLLARWDAGSLDAFTKKMNDAAKSLGMKNTTYTDPSGLKETT 717

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             T +  + +    ++++  + +       +     K  N N  +    G  G+KTG + 
Sbjct: 718 KSTASDQLKLAKAAMQSEAFREVVATPNTQIPGLDGKIYNNNNLLVK-PGVIGIKTGSST 776

Query: 223 ASGFNIVASAIQ----GDQSLIAVILGALDRNTRNK-------VSASLLSMGFYNKTDRK 271
            +G  ++  A++      Q ++ V+L      T +         S  L++      T   
Sbjct: 777 PAGGALMWGAVRTIDGKKQRILGVVLEQRAPTTLDASLQLAQTESYKLITAAQDALTSAT 836

Query: 272 KINYIIKD-FYQQNLSNEVPNISEEVCTTQK-EIINYNTQMKEAKDKESHFIDFEKITLL 329
            I            L    P ++ +         +N + ++ +      H    +  T++
Sbjct: 837 VIKKGDVVGQVDDGLGGTTPVVATKDLKAVGWAGLNVDIKIGDGGKTIPHTA--KAGTVV 894

Query: 330 KNKITK 335
                 
Sbjct: 895 GEVTVG 900


>gi|46143200|ref|ZP_00204410.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 154

 Score = 78.5 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 4/115 (3%)

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDF 280
              + ++    +  LI+V++G      R   S  LL  GF N    K +      + +  
Sbjct: 1   HNLVASAVNNNNMRLISVVMGVATHKGREIESKKLLQWGFANFETFKSLQANQSIVEEKV 60

Query: 281 YQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
           Y  N +     + E+   T  +    + + +   +++       K  ++   I +
Sbjct: 61  YYGNTNKVQLGVLEDAYITLPKGRQNDVKTRYELNQKMLTAPLAKGQIVGKIIYQ 115


>gi|153595|gb|AAA26866.1| penicillin-binding protein 3 [Streptococcus pneumoniae]
          Length = 210

 Score = 78.5 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL----GADG 215
              +  +A D+AI++  +   +PQ +   +       G    +TN+ +        G DG
Sbjct: 26  DEENKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDG 85

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRK 271
           +KTG T  +G + V + ++    +I V+L A     +   R   ++SL+       T RK
Sbjct: 86  LKTGTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRK 145

Query: 272 KINYII------KDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEK 325
            +                     +    E++   ++     +  ++   D ++     E 
Sbjct: 146 IVQQGDAYQDSKAPVQDGKEDTVIAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEA 205

Query: 326 ITLLK 330
            T++ 
Sbjct: 206 GTVVG 210


>gi|213029379|ref|ZP_03343826.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 141

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 4/108 (3%)

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQN 284
           VASA QGD  LI+V+LGA     R   S  LL+ GF        I      + +  +  +
Sbjct: 1   VASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGD 60

Query: 285 LSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                    +    T       N +     ++       +K  ++   
Sbjct: 61  KREVNLGAGDAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 108


>gi|70725304|ref|YP_252218.1| hypothetical protein SH0303 [Staphylococcus haemolyticus JCSC1435]
 gi|68446028|dbj|BAE03612.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 383

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 131/342 (38%), Gaps = 43/342 (12%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKL-------------PYYTLLDTNTGHVIAENYPD 48
           +   +I  +++L       S +                  P   +L T+ G ++     +
Sbjct: 7   KGIGIITTISLLHTSISDASESPVTIANKEKNSSISTKYQPSGVMLTTDQGQILYNYRGN 66

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTL 104
           +  +PAS++K+MT Y+ +  ++  K  L   + I+   +        S+ + K+G T T+
Sbjct: 67  NQVDPASMSKMMTLYLTYEAIENGKLKLNDKVKITNKYATMSNLPNLSSVSLKQGQTYTI 126

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---- 160
           +  +K   + S+N  A+ + E +      F   MN  +K+  ++ T+F+N  G       
Sbjct: 127 EELIKQTTLASSNAAAMILGEKVSGDNNTFTNKMNQQAKSFNMTNTNFVNPAGAQNSLLD 186

Query: 161 ----------HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW----A 206
                         +TA+DM +L   +   +PQ +   ++     +G  + +TN      
Sbjct: 187 QYAPSKFKKQDFPKSTAKDMNLLMQALIKKYPQILQISKLTRDTQRGNTFKSTNLSLKGQ 246

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL------DRNTRNKVSASLL 260
                G DG+KTG T   G+NI  +  Q    L   I+          +  RN++   ++
Sbjct: 247 PLYLPGTDGLKTG-TSNKGYNIALTNKQDQLRLNETIMNVKPFGDVNAKYNRNRIGNQII 305

Query: 261 SMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKE 302
                    +K +          N  +   ++ + V   + +
Sbjct: 306 KQYRQKYEYKKVLTEGD-HEIDGNKYHVKKDLYDVVPKDKSK 346


>gi|319653045|ref|ZP_08007149.1| hypothetical protein HMPREF1013_03764 [Bacillus sp. 2_A_57_CT2]
 gi|317395264|gb|EFV75998.1| hypothetical protein HMPREF1013_03764 [Bacillus sp. 2_A_57_CT2]
          Length = 101

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 3/77 (3%)

Query: 1  MRQFLVIIAMAMLSN---IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
          M++ LV I +                         + D+ +G V+     D    PASLT
Sbjct: 1  MKKLLVFILLLFSFPTAYAAAEEPKDPAIISEAAIVTDSESGAVLYAKNADKKMYPASLT 60

Query: 58 KLMTAYVVFSFLKEKKA 74
          K+ TA         K  
Sbjct: 61 KIATAIYAIENGDLKDI 77


>gi|195953485|ref|YP_002121775.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Hydrogenobaculum sp. Y04AAS1]
 gi|195933097|gb|ACG57797.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Hydrogenobaculum sp. Y04AAS1]
          Length = 407

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 134/365 (36%), Gaps = 40/365 (10%)

Query: 1   MRQFLVIIAMAMLS----NIFPFLSIAE------------------TNKLPYYTLLDTNT 38
           +++FLV++ +  +      +F      E                     + Y  +    +
Sbjct: 15  LKRFLVLLVLGFIFYVGFQLFKGFPKPELELSLKDQQISGSFNISWPTDIRYGVIGTLQS 74

Query: 39  GHVIAENYPDH-PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP------ 91
           G +     P+   W  AS+ K+MTAY++              IT+++             
Sbjct: 75  GII--SKNPNQGQWPLASVAKIMTAYIILKDHPLPIGQDGPTITVTQKEVNEYEAFKKDG 132

Query: 92  -SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            S      G  +T    L+ L++ SAN+ A  +A     + K FV  MN T+++LGL  T
Sbjct: 133 QSVVKVALGEKLTERQLLEGLMIPSANNFAYILARWDAGSVKAFVDKMNKTAQSLGLKDT 192

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
            + +  G    G  +T +D   L+                +          N N+ +G  
Sbjct: 193 RYEDPSG-ASAGTVSTPKDQFKLTQLAMQIPTFRHMVAMPQVNLPIAGIQYNVNYDLGKD 251

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN---KVSASLLSMGFYNK 267
               G+KTG +  +G N V  + QG+  ++ VI GA  +++     K +  L+       
Sbjct: 252 N-IVGVKTGSSLPAGANFVFDSKQGNIDILGVIFGASGKSSLMTALKDAIILIDTTKTQI 310

Query: 268 TDRKKINYIIKDFYQQN--LSNEVP-NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
           +  K I+   +  + +   +  E+P   S++  T     +     +   KD +      E
Sbjct: 311 STEKLISKNQQIGFIKVSWMKKEIPMLASQDFSTVVYPGMKITYSLYPIKDMKFPIKSNE 370

Query: 325 KITLL 329
            I  L
Sbjct: 371 VIGTL 375


>gi|52424904|ref|YP_088041.1| DacC protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306956|gb|AAU37456.1| DacC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 269

 Score = 78.1 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 92/238 (38%), Gaps = 9/238 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + D     V+    P+     AS+TKLMTA V     +      +      ++      
Sbjct: 1   MVYDFTHNKVLESRSPNSILPIASVTKLMTANVFLENNRNPNCSSSITD---EDYDHIKG 57

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           + +   K + ++ +  LK ++V S N  A A++ S   +  +F++ MN  ++ LG+++T 
Sbjct: 58  TRTKLPKYTPISCNELLKAMLVHSDNYAAHALSRSAGMSRAQFIKKMNQKAQQLGMNSTR 117

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA---VG 208
           F ++ G+      +    + +  + +     + +   +   +          N       
Sbjct: 118 FSDSSGLSSSNVSSPMDLVKLAKYSLDKQLIKTLSNTRATYIRAGRHNVFMQNTNKLVRE 177

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLSMG 263
               A   KTG+   SG+N+V       ++S I VI L       R+  +   L   G
Sbjct: 178 EMFDAAINKTGYIRESGYNLVFVNKHQCNRSTIGVISLNNASSAYRSNFTKHKLEEYG 235


>gi|302552148|ref|ZP_07304490.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
 gi|302469766|gb|EFL32859.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces viridochromogenes
           DSM 40736]
          Length = 930

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 10/205 (4%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY++      K       I I + A +       S     KG  +
Sbjct: 601 EQKPVPIASVAKVMTAYLILREHPLKSGAPGPKIEIDQAAEDQSDAGQESTVDVTKGDKI 660

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T   AL+ +++ SAN+IA  +A     +EK FVQ MN+ +K+LG+  T + +  G+    
Sbjct: 661 TQREALESILIASANNIARLLARWDAGSEKSFVQKMNDAAKDLGMKNTTYTDPSGLNNTT 720

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+               +  ++ KG K+ N N  VG +    G+KTG T 
Sbjct: 721 -VSTAVDQVKLAKAAMQQPAFREVAAMMSYVDYKGTKHDNWNRLVG-YNDVTGIKTGTTT 778

Query: 223 ASGFNIVASAIQG----DQSLIAVI 243
           ++  N+V +A +      + +I  +
Sbjct: 779 SALGNLVFAAKKDVDGETRRIIGAV 803


>gi|126207904|ref|YP_001053129.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae L20]
 gi|126096696|gb|ABN73524.1| penicillin-binding protein 7 precursor [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 259

 Score = 77.7 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 91/230 (39%), Gaps = 8/230 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              Y + D     ++     ++    AS+TKLMTA +     K K    +      ++  
Sbjct: 18  AQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISD---QDFD 74

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               + +   K + +  D  LK ++V S N  A A++ S   +  +F+Q MN  ++ LG+
Sbjct: 75  HIKGTGTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGM 134

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
            +T F ++ G+      +    + +  + +     Q +   +   + +  +     N + 
Sbjct: 135 RSTRFSDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSA 194

Query: 208 GTFL---GADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTR 252
                   A   KTG+   SG+N+V       + + I VI L      TR
Sbjct: 195 LVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRSSATR 244


>gi|317406568|gb|EFV86761.1| hypothetical protein HMPREF0005_04939 [Achromobacter xylosoxidans
           C54]
          Length = 277

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 88/239 (36%), Gaps = 5/239 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +++ +    ++ E +   +  +LD+ +G  +     +     ASLTKL+TA VV      
Sbjct: 37  LMARMPGVQALIEASGASHVLVLDSRSGATLFGRAENDAVPIASLTKLVTAMVVLDTSP- 95

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
                   I      +    + S    G+++TLD  LKL ++ S N  A A+A +    E
Sbjct: 96  -DLSRRIRIDERDALATASGAASPLPVGASVTLDTLLKLALMASDNRAAHALARAYPGGE 154

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR-DMAILSWRIKTDFPQYMHYFQI 190
             F + +   +  L L  T   +A G+      + A     I +        +       
Sbjct: 155 TAFAEALQRKAAALRLEHTTLQDATGLSNANRASAADIGRIIDAAAAYPQIARDTTTLAD 214

Query: 191 KGLEIKGK-KYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
                  +  Y NTN  VG         KTG +  +G  +       D+ L  V+L   
Sbjct: 215 TVEAAGSRLSYRNTNPLVGARDWDVRLSKTGNSTEAGRCLAMRLHIDDRDLTLVLLNGR 273


>gi|289450082|ref|YP_003474721.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289184629|gb|ADC91054.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 748

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 57/319 (17%), Positives = 111/319 (34%), Gaps = 23/319 (7%)

Query: 37  NTGHV--IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           N G +  +        + PA++TKL +  + +  L ++    T  I    +      +  
Sbjct: 156 NNGQIQSVFTKKEHEKFAPATMTKLFSVLLAYDKLNQRLNEETDIIPSDVDGLAEVGARI 215

Query: 95  T-FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
             FK G ++ + +     +++S  D   A+A      E  FV+ MN  +K LG++ +HF 
Sbjct: 216 IGFKVGESLPIADLFLGAVMESGADAIRALARLSYGDENDFVKAMNEKAKALGMNDSHFS 275

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT---NWAVGTF 210
           N  G+   G  T+  DMAI+     T                K   +P     N  +   
Sbjct: 276 NCTGLSADGDSTSVHDMAIVMALCATRPQLVQMLCTAGYTTQKTDFHPYGIALNSILFND 335

Query: 211 L------------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           +               G + G++    FN++  A  G + L+ V  GA     R     +
Sbjct: 336 IEQAKAQSEGRKVYIQGGRPGWSPDGLFNLMTFAHVGKKLLVVVSAGADQAQARFADHDN 395

Query: 259 LLSMGFYNKTDRKKINY-----IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
           + +     + D   +        IK    ++   E+ N  +    +   ++       + 
Sbjct: 396 IYNQLIGAQHDVTVLTPHQPVGEIKLINGRSDKVELANGPDSFTASLPVMLFAEDVDIKL 455

Query: 314 KDKESHFIDFEKITLLKNK 332
           +  E      +K   +   
Sbjct: 456 QVPERIDAPVKKGQEIGQI 474


>gi|145483651|ref|XP_001427848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394931|emb|CAK60450.1| unnamed protein product [Paramecium tetraurelia]
          Length = 472

 Score = 77.7 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 46/260 (17%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT-PITIS 83
                 + + D     +I++   +     ASLTK+MT Y+    LK+         + ++
Sbjct: 204 NVSAKSFIVYDCLENRIISQRKCNRRMEIASLTKIMTFYITMVILKQLNLKSQDIKVKVT 263

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES----------------- 126
           K ASE   + +  K    +T+ + L  L++ S ND A  IA++                 
Sbjct: 264 KKASETIGTTAELKYNDILTIQDLLYGLMLPSGNDAATLIAQAIGTIILFYEADKRLDSK 323

Query: 127 --------------------LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
                                    + F+  MN+ S  +G   T F   HG+    +Y++
Sbjct: 324 LIDIEQMSAEGHYYNVELKSHQCPIEIFISKMNHYSTLMGQQNTQFACVHGLANEDNYSS 383

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
             D+ +LS             FQ      K  ++ NTN       G  G+KTG T ++G 
Sbjct: 384 CHDIVLLSLECM-----KYDTFQQPLYNQKSYEWKNTNKL--LDKGFFGIKTGVTDSAGP 436

Query: 227 NIVASAIQGDQS-LIAVILG 245
            + ++    +    I V+L 
Sbjct: 437 CLASAYRSNEMEYYIIVVLN 456


>gi|295838237|ref|ZP_06825170.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB74]
 gi|197698211|gb|EDY45144.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB74]
          Length = 1017

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 105/287 (36%), Gaps = 23/287 (8%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKK------AMLTTPITISKNASEYPPSNSTFKKGS 100
              P   AS+ K+MTAY+V      KK        +          S    S      G 
Sbjct: 684 AQKPVPIASVAKVMTAYLVLRDHPVKKGTDGASITMDQKAEDDAGLSAQNESTVPVHAGQ 743

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++   A++ +++ SAN+IA  +A     +EK+FV  MN  + +LG+  T + +  G+  
Sbjct: 744 KLSQREAIEAIMLASANNIARQLARWDAGSEKEFVTKMNEAANDLGMRNTTYTDPSGL-N 802

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               +TA D   L      D             +  G    N N  V       G+KTG 
Sbjct: 803 KTTVSTAEDQVRLGKVAMKDPLFREVVRMPSYEDSNGTTQTNWNRLVPMNNTV-GIKTGT 861

Query: 221 TCASGFNIVASAIQG----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           T A+G N++ +A +      ++++  +L        N +    L+ G             
Sbjct: 862 TTAAGGNLLYAATKEVGGTTRTIVGAVLAQPPAPEDNSILTGALNAG-----------KA 910

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
           + +  Q  L  E      +V  T  + +   T +  AKD  +     
Sbjct: 911 LIEAAQGTLVAEKVVKKGDVVGTVDDGLGGTTPVVAAKDLTAVGWPG 957


>gi|289767530|ref|ZP_06526908.1| LOW QUALITY PROTEIN: D-alanyl-D-alanine carboxypeptidase
           [Streptomyces lividans TK24]
 gi|289697729|gb|EFD65158.1| LOW QUALITY PROTEIN: D-alanyl-D-alanine carboxypeptidase
           [Streptomyces lividans TK24]
          Length = 378

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 9/161 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK--- 72
             P            + + D  TG V+A N       PAS  K + A  V   L      
Sbjct: 47  PHPAAPRVPEVSALSWVVADAGTGDVLAANDAHRELPPASTLKTLFALTVLPALPGGIRH 106

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +        I         S+            + L   +  ++ + AV +  SL     
Sbjct: 107 EVGPEDLSGIGP------GSSLVGVVEGQTYRVSDLWNGVFLNSGNDAVHVLASLTGGWS 160

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
                M   ++ LG   TH  +  G    G  ++A D+A+ 
Sbjct: 161 ATAARMQAEARALGARDTHVRSPDGYDAPGQVSSAYDLAVF 201


>gi|256783646|ref|ZP_05522077.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 444

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 50/161 (31%), Gaps = 9/161 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK--- 72
             P            + + D  TG V+A N       PAS  K + A  V   L      
Sbjct: 37  PHPAAPRVPEVSALSWVVADAGTGDVLAANDAHRELPPASTLKTLFALTVLPALPGGIRH 96

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +        I         S+            + L   +  ++ + AV +  SL     
Sbjct: 97  EVGPEDLSGIGP------GSSLVGVVEGQTYRVSDLWNGVFLNSGNDAVHVLASLTGGWS 150

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
                M   ++ LG   TH  +  G    G  ++A D+A+ 
Sbjct: 151 ATAARMQAEARALGARDTHVRSPDGYDAPGQVSSAYDLAVF 191


>gi|118387709|ref|XP_001026957.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89308727|gb|EAS06715.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 805

 Score = 77.3 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 100/291 (34%), Gaps = 37/291 (12%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT- 77
            +   +      +++ D  +  +I           ASLTKLMT YV +   +  +  +  
Sbjct: 507 QIVPPKEVTAQSWSVFDFESNSLIDGKQCYVQREVASLTKLMTFYVAYKLFESLQLDIKL 566

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK---- 133
             + +++  ++   ++    K + +++ +    L++ S ND A  IA  +          
Sbjct: 567 ILLQVTECCTQIEGTSGKLVKDTWLSVLDLFHGLLLPSGNDCAELIAIKIGAMLDMDQNK 626

Query: 134 -------------------------FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
                                    F+  MN   K++G+ +T F N  G+    + +TA 
Sbjct: 627 QLNPQMDMYQLNSELDKRASQAKMIFIVKMNEFCKDIGMHSTFFSNVTGLPDSNNVSTAY 686

Query: 169 DMAILSWRIKTDFPQYMHYFQ-IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           D+  +   +     +   +   +   + +       N       G  G+KTG T ++G  
Sbjct: 687 DIECMQIPVFRQIVRKQEHIADVYDNQSEKSDKIWFNTNKLLNNGFCGIKTGITQSAGPC 746

Query: 228 IVASAIQGDQS------LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
           + +     D        +I ++L       R + S  L         + K 
Sbjct: 747 LASFIKIKDSETGIKKQIIIILLDCYTVEDRWEDSYLLAKWAIKAVQNNKL 797


>gi|291519269|emb|CBK74490.1| D-alanyl-D-alanine carboxypeptidase [Butyrivibrio fibrisolvens
           16/4]
          Length = 376

 Score = 76.6 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 86/241 (35%), Gaps = 18/241 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                Y  L++  T  +IA         PAS+TK++T              L   + +S 
Sbjct: 122 DVVSEYGILINNKTKDIIASRNATERIVPASMTKVLTVLTA--ANHITAEQLDDKVILSH 179

Query: 85  NASEYP----PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            A +Y      S S F +   +T+ +     I+ S  D A  +A  +      FV+ MN 
Sbjct: 180 EAVDYSYAGGGSTSGFVEDEEVTVKDLFYGTILPSGGDAAAQLAIYVAGDIDSFVKMMNE 239

Query: 141 TSKNLGLSAT-HFMNAHGVVQHGHYTTARDMAILSWRI----KTDFPQYMHYFQIKGLEI 195
            +K LG+S T HF N  G     HY+T  D+AI+                  +      +
Sbjct: 240 QAKELGISETSHFTNPVGFHNKEHYSTPYDIAIIMMAALDNDICKEVISTKVYNSTATNV 299

Query: 196 KGKKYPNTNWAVGTFLG------ADGMKTGFTCASGFNIVASAIQG-DQSLIAVILGALD 248
             +    +NW +            +G KTG+   SG   V++ I       I     +  
Sbjct: 300 NPEGITISNWFLRRIEDKEFGGEIEGAKTGYVDESGSCAVSAMISNSGTEYICCTAKSSS 359

Query: 249 R 249
            
Sbjct: 360 S 360


>gi|50954852|ref|YP_062140.1| D-alanyl-D-alanine endopeptidase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951334|gb|AAT89035.1| D-alanyl-D-alanine endopeptidase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 394

 Score = 76.6 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 103/280 (36%), Gaps = 19/280 (6%)

Query: 47  PDHPWNPASLTKLMTAYVVFSF------LKEKKAMLTTPI-TISKNASEYPPSNSTFKKG 99
            D     AS+TK +TA VV          +  +   T     I         S +  K G
Sbjct: 67  SDASLPIASVTKAITALVVLDKKPLSGSEQGPEISFTQKDVDIWNQVVGEGGSWAPVKAG 126

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           ++MT   AL  +++ SAN+ A+++A     +   +V   N+     G S T   +  G+ 
Sbjct: 127 TSMTEKEALTAMLLPSANNYAISLANWAFGSTGAYVSAANDWLGKKGFSGTKITSPDGL- 185

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
             G+ +T +D+  +   +           +            NTN  +G   G DG+KTG
Sbjct: 186 DPGNVSTTKDLIGIGKLVLDSPALSSIVSKKTATLPGAGDQDNTNSLLGV-EGVDGIKTG 244

Query: 220 FTCASGFNIVASAI----QGDQSLIAVILGALDRNTRNKVSASLLS---MGFYNKTDRK- 271
            T  +GF ++ SA     +    ++  +LGA  R+T       LL     GF+     K 
Sbjct: 245 NTDEAGFCLLFSAEVPVGKAKVRVVGAVLGADSRDTLWANVKELLQSMRNGFHEVEAVKA 304

Query: 272 --KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
                     +   +        +  V +     ++  T+
Sbjct: 305 GQVFGSYDTPWGSSSDLVATAGKTFVVWSDTPLRVHLETR 344


>gi|229824756|ref|ZP_04450825.1| hypothetical protein GCWU000182_00104 [Abiotrophia defectiva ATCC
           49176]
 gi|229791085|gb|EEP27199.1| hypothetical protein GCWU000182_00104 [Abiotrophia defectiva ATCC
           49176]
          Length = 329

 Score = 76.6 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 98/250 (39%), Gaps = 24/250 (9%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI- 82
            +       +  ++    I          PASLTK+MTAYVVF+  K     L   + I 
Sbjct: 72  PSFNAKSVIV--SSDEEAIYSKNCFKKMYPASLTKMMTAYVVFAKEK----NLDRTVKID 125

Query: 83  --SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
             S   SE          G  +T+   L   +V SAND A A+A ++  +E+KF   MN 
Sbjct: 126 GESIKISEPLAKKIRLMDGDEVTIRQLLNAALVTSANDAAKALAVAVAGSEEKFAALMNE 185

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD----FPQYMHYFQIKGLEIK 196
            +K +G + + F+N+ G+    HY+T  D+ ++   +  +           + +K     
Sbjct: 186 EAKKIGATHSRFVNSTGLHDTAHYSTLYDLYLIFNELLKNSEFVKIVNQGSYTMKHKNSA 245

Query: 197 GKKYPNTNWAVGTF----------LGADGMKTGFTCASGFNIVASAI-QGDQSLIAVILG 245
           G +   T  +   +              G KTG T  +G  I+ S     D+  I  +L 
Sbjct: 246 GVEVVKTMSSTNQYLAGVMKVPDGYTVIGGKTGTTDEAGSCILMSFKSSSDKKYIVGVLK 305

Query: 246 ALDRNTRNKV 255
           A D       
Sbjct: 306 ASDALNLYAQ 315


>gi|167947195|ref|ZP_02534269.1| D-alanyl-D-alanine carboxypeptidase [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 66

 Score = 76.2 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 28/58 (48%)

Query: 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           +          Y LLD  +G ++AE+       PASLTK+MTAY VF  L+  +   
Sbjct: 2  PIPSPPKVAASGYLLLDFYSGKILAESNASQRLEPASLTKIMTAYAVFRELQGGQHQP 59


>gi|302535014|ref|ZP_07287356.1| predicted protein [Streptomyces sp. C]
 gi|302443909|gb|EFL15725.1| predicted protein [Streptomyces sp. C]
          Length = 879

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 71/365 (19%), Positives = 131/365 (35%), Gaps = 36/365 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY------------------YTLLDTNTGHVIAEN 45
            L+II +A++  + P  +                            ++     G +   +
Sbjct: 501 LLLIIVIAVVQLVRPLPAPKLKLTAKATYTFPGGAPNLPWPTEGQASMAAAGLGTI-GSS 559

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS--------KNASEYPPSNSTFK 97
               P   AS+TK MTAY++      KK      I +         K+ S+   + +T K
Sbjct: 560 GEQKPVPIASVTKSMTAYIIMRDHPFKKGEKGAMIDVDKTAETEGQKDKSDNESTLNTVK 619

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           +G  ++  +A+  L++ SAN+IA  +A     +++ FV+ MN+T+K LG++ T + +  G
Sbjct: 620 EGEKISEYDAIAALMIPSANNIARLLARWDSGSQEAFVKKMNDTAKELGMTNTTYTDPSG 679

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           +      +TA D   L  +I                +  GK + N N  V       G+K
Sbjct: 680 LDATT-VSTAEDQVKLGLKIVEIPALVDITRMPAWTDQTGKVWQNWNRLVPFNDS-LGIK 737

Query: 218 TGFTCASGFNIVASAIQG----DQSLIAVILGALDR---NTRNKVSASLLSMGFYNKTDR 270
           TG T  +G N++ +A +     +Q L+  +LG       +T    S SLL          
Sbjct: 738 TGTTTKAGGNLLFAAQKKVGDTNQLLVGAVLGQHKPPIIDTVIAQSRSLLIATQKEVQGA 797

Query: 271 KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
             +       Y  +       +            +    +K      +     +  T + 
Sbjct: 798 PVVKKGQVVGYVDDGLGGHTPVVATADVQAVGWSSLTVDLKLGDGGTAIPESAKAGTQVG 857

Query: 331 NKITK 335
                
Sbjct: 858 VLTVG 862


>gi|169839592|ref|ZP_02872780.1| D-alanyl-D-alanine carboxypeptidase [candidate division TM7
           single-cell isolate TM7a]
          Length = 203

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 6/196 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           ++   ++++MA L+      +  E        L+    G++I E+        AS+TK+M
Sbjct: 9   IKSKKIVLSMAFLAMSAFSFADGENYHDYKALLIGDVNGNIIKEDNSLAVRPLASVTKIM 68

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T+ +    +K  +      +T+S  A+   P       G   T+ + LK  I+KS+N+ A
Sbjct: 69  TSILTLDKIKSGQISYDDKVTVSSKAASV-PYGVKLTAGKQYTVRDLLKATIIKSSNNAA 127

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT-----ARDMAILSW 175
            A+AE +      FV+ MN  +++ GL +  + + +G+      +      ARD+  L+ 
Sbjct: 128 YALAEYVGGDVPSFVRSMNEKARSYGLDSLRYCSPNGLPPSYTGSCMDQGNARDLYKLAQ 187

Query: 176 RIKTDFPQYMHYFQIK 191
               D+  Y+++ +IK
Sbjct: 188 ITLKDYSDYLNFSKIK 203


>gi|311897918|dbj|BAJ30326.1| putative peptidase S11 family protein [Kitasatospora setae KM-6054]
          Length = 740

 Score = 75.8 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 11/218 (5%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS----NSTFK 97
           +  +  + P   AS+TK+M AY++      KK      +T+ K A++   +      T K
Sbjct: 407 LGGSGEEKPVPIASVTKVMNAYLILQAHPLKKGESGPTLTVDKQAAQESGNADESTVTLK 466

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           +G  ++   AL++L++ SAN++A  +A     +E++FV+ MN T+  LG+  T + +  G
Sbjct: 467 EGQQLSEYEALEMLMLPSANNVARLLARWDSGSEEEFVKKMNATAAQLGMPNTTYADPAG 526

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
              +   T    + +           +         +  G++  NTN  +G   G  G+K
Sbjct: 527 YDNNTKSTAKDQLKLAEK--VMQLEIFKQIVAEPDTKFNGQRVFNTNALLGKN-GNIGVK 583

Query: 218 TGFTCASGFNIVASAIQG----DQSLIAVILGALDRNT 251
           TG +  +   ++ +A++      + ++ V LG      
Sbjct: 584 TGSSTPAQSCLMWAAVKEIGGVQRMILGVTLGQPQTKE 621


>gi|333026337|ref|ZP_08454401.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
 gi|332746189|gb|EGJ76630.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces sp.
           Tu6071]
          Length = 858

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 23/287 (8%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKK------AMLTTPITISKNASEYPPSNSTFKKGS 100
              P   AS+ K+MTAY+V      KK        +          S    S    + G 
Sbjct: 525 AQKPVPIASVAKVMTAYLVLRDHPVKKGGDGASITMDQKAEDDAGLSAQNESTVDVRAGQ 584

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++   A++ +++ SAN+IA  +A     +EK FV  MN  +  LG+  T + +  G+  
Sbjct: 585 KLSQKEAIEAIMLASANNIARQLARWDAGSEKDFVAKMNKAADELGMKNTTYTDPSGL-N 643

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               +TA D   L      D            ++  GK   N N  V       G+KTG 
Sbjct: 644 KTTVSTAEDQVKLGKVAMKDPLFREVVRMPAYVDSNGKTQTNWNRLVPMNNTV-GIKTGT 702

Query: 221 TCASGFNIVASAIQG----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           T A+G N++ +A +      ++++  +L        N +    L+ G             
Sbjct: 703 TTAAGGNLLYAATKEVGGTTRTIVGAVLAQPPAPEDNSILTGALNAG-----------KA 751

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
           + +  Q  L  E      +V  +  + +   T +  AKD  +     
Sbjct: 752 LIEAAQGTLVAEKVVKKGDVVGSVDDGLGGTTPVVAAKDLTAVGWPG 798


>gi|318056957|ref|ZP_07975680.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actG]
          Length = 886

 Score = 75.8 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 23/287 (8%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKK------AMLTTPITISKNASEYPPSNSTFKKGS 100
              P   AS+ K+MTAY+V      KK        +          S    S    + G 
Sbjct: 553 AQKPVPIASVAKVMTAYLVLRDHPVKKGGDGASITMDQKAEDDAGLSAQNESTVDVRAGQ 612

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++   A++ +++ SAN+IA  +A     +EK FV  MN  +  LG+  T + +  G+  
Sbjct: 613 KLSQKEAIEAIMLASANNIARQLARWDAGSEKDFVAKMNKAADELGMKNTTYTDPSGL-N 671

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               +TA D   L      D            ++  GK   N N  V       G+KTG 
Sbjct: 672 KTTVSTAEDQVKLGKVAMKDPLFREVVRMPAYVDSNGKTQTNWNRLVPMNNTV-GIKTGT 730

Query: 221 TCASGFNIVASAIQG----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           T A+G N++ +A +      ++++  +L        N +    L+ G             
Sbjct: 731 TTAAGGNLLYAATKEVGGTTRTIVGAVLAQPPAPEDNSILTGALNAG-----------KA 779

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
           + +  Q  L  E      +V  +  + +   T +  AKD  +     
Sbjct: 780 LIEAAQGTLVAEKVVKKGDVVGSVDDGLGGTTPVVAAKDLTAVGWPG 826


>gi|238059325|ref|ZP_04604034.1| serine-type D-Ala-D-Ala carboxypeptidase [Micromonospora sp. ATCC
           39149]
 gi|237881136|gb|EEP69964.1| serine-type D-Ala-D-Ala carboxypeptidase [Micromonospora sp. ATCC
           39149]
          Length = 274

 Score = 75.8 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFP-------QYMHYFQIKGLEIKGKKYPNTNWA 206
           +  G+   G +T+A D+A+++     D         +         L  +G +  N N  
Sbjct: 77  DPSGLDDPGQFTSAYDLALIARVCFADPTFRRYALTEQARIPAQPALRRQGFQIQNENQL 136

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVSASLLSMGFY 265
           +  + GA G KTGFT  +    V +A  G + L+  +LGA  R  R  +  A+LL  GF 
Sbjct: 137 IYRYPGALGGKTGFTDYARHTYVGAAQCGGRRLVVTLLGAEPRPMRGWEQGAALLDWGFS 196


>gi|46203560|ref|ZP_00051352.2| COG1686: D-alanyl-D-alanine carboxypeptidase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 110

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           + +  +A   L         A         +++ ++G V+       PW PAS+TKLMT 
Sbjct: 8   RLIGTLAALGLMAGTATAVTAPI------LVVEADSGKVLYSQGATDPWYPASITKLMTT 61

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           YV    +++ K  L T +TIS  A+  PPS   FK G+ +TLDNALK
Sbjct: 62  YVALDMVRQGKISLDTLLTISPAAAAEPPSKMGFKPGTQITLDNALK 108


>gi|322514766|ref|ZP_08067790.1| serine-type D-Ala-D-Ala carboxypeptidase [Actinobacillus ureae ATCC
           25976]
 gi|322119262|gb|EFX91390.1| serine-type D-Ala-D-Ala carboxypeptidase [Actinobacillus ureae ATCC
           25976]
          Length = 198

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 78/203 (38%), Gaps = 14/203 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++FL +  +    +I              Y + D     ++     ++    AS+TKLMT
Sbjct: 7   KKFLSVFFLFPTLSI-----------AQSYVVYDFTHDKILESRSANNVQPIASVTKLMT 55

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A V     K K    +      ++      + +   K +++     LK ++V S N  A 
Sbjct: 56  ANVFLENNKNKNCSASISD---EDFDYIKGTGTKLPKYTSIACSELLKAMLVHSDNYAAH 112

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A++ S   +  +F+Q MN  ++ LG+ +T F ++ G+      +    + +  + +    
Sbjct: 113 ALSRSAGMSRSQFIQKMNQKAQQLGMRSTRFSDSSGLSSTNISSAMDLVKLAKYSLNNAK 172

Query: 182 PQYMHYFQIKGLEIKGKKYPNTN 204
            Q +   +   +    +     N
Sbjct: 173 IQELSNTKAAYIRAGKRNVFMQN 195


>gi|55822069|ref|YP_140510.1| D-alanyl-D-alanine carboxypeptidase, truncated [Streptococcus
          thermophilus CNRZ1066]
 gi|55738054|gb|AAV61695.1| D-alanyl-D-alanine carboxypeptidase, truncated [Streptococcus
          thermophilus CNRZ1066]
          Length = 131

 Score = 75.4 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           ++   ++                 +   ++  TG ++ E     P    S+TKL+TAY+
Sbjct: 3  FLLCLGSVAPTFAADKKKGFDASAKHAIAVEATTGKILYEKDATTPTGIGSITKLLTAYM 62

Query: 65 VFSFLKEKKAMLTTPITISKNAS 87
          V+  + + +    T + IS    
Sbjct: 63 VYKAVDQGELKWNTKVDISDYPF 85


>gi|318080587|ref|ZP_07987919.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SA3_actF]
          Length = 409

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 23/287 (8%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKK------AMLTTPITISKNASEYPPSNSTFKKGS 100
              P   AS+ K+MTAY+V      KK        +          S    S    + G 
Sbjct: 76  AQKPVPIASVAKVMTAYLVLRDHPVKKGGDGASITMDQKAEDDAGLSAQNESTVDVRAGQ 135

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++   A++ +++ SAN+IA  +A     +EK FV  MN  +  LG+  T + +  G+  
Sbjct: 136 KLSQKEAIEAIMLASANNIARQLARWDAGSEKDFVAKMNKAADELGMKNTTYTDPSGL-N 194

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               +TA D   L      D            ++  GK   N N  V       G+KTG 
Sbjct: 195 KTTVSTAEDQVKLGKVAMKDPLFREVVRMPAYVDSNGKTQTNWNRLVPMNNTV-GIKTGT 253

Query: 221 TCASGFNIVASAIQG----DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
           T A+G N++ +A +      ++++  +L        N +    L+ G             
Sbjct: 254 TTAAGGNLLYAATKEVGGTTRTIVGAVLAQPPAPEDNSILTGALNAG-----------KA 302

Query: 277 IKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
           + +  Q  L  E      +V  +  + +   T +  AKD  +     
Sbjct: 303 LIEAAQGTLVAEKVVKKGDVVGSVDDGLGGTTPVVAAKDLTAVGWPG 349


>gi|238925895|ref|YP_002939413.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
 gi|238877572|gb|ACR77279.1| serine-type D-Ala-D-Ala carboxypeptidase [Eubacterium rectale ATCC
           33656]
 gi|291522651|emb|CBK80944.1| D-alanyl-D-alanine carboxypeptidase [Coprococcus catus GD/7]
          Length = 318

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 23/257 (8%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            ++       L+D +   +      + P  PASL KL       +       ++     I
Sbjct: 55  PDSYNAKSLILVDCSDDEIFVSKNENEPQIPASLAKLFVIEYASTLADLDSIVVADYGAI 114

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTE 131
           S      P S+    K     L N    ++V S ND A  +A+              +  
Sbjct: 115 S---LTKPGSSVAQIKEKEYFLHNLFAAMLVPSGNDAAYVVADYCGGLLSPQAESCQERV 171

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW---RIKTDFPQYMHYF 188
           + F++++N   +  G   T   +  G       TT     ++               + +
Sbjct: 172 RIFMENLNLHLQQQGYLDTVLYDPSGFDMEALTTTLDLKEVVYRLLEYSWFREIVSQNTY 231

Query: 189 QIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                +   + + NTN               G+KTG + +  +N++    Q  +  +   
Sbjct: 232 TATLPDGSTQIWQNTNAFLDPTSEYYNENVCGIKTG-SLSDDYNLIVLYQQHGKEFLICS 290

Query: 244 LGALDRNTRNKVSASLL 260
           LG+   ++R      +L
Sbjct: 291 LGSQSDSSRYDDVNFIL 307


>gi|302560107|ref|ZP_07312449.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302477725|gb|EFL40818.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 471

 Score = 75.0 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 10/205 (4%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY++      K       I + + A +       S      G  +
Sbjct: 142 EQKPVPIASVAKVMTAYLILRDHPLKSGADGPTIDVDQTAEKQSSAGDESTVNVTAGDKI 201

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   AL+ +++ SAN++A  +A     +EK FV+ MN  +K+LG++ T + +  G+    
Sbjct: 202 SQREALEAILIASANNVARLVARWDAGSEKAFVEKMNEAAKDLGMTDTTYTDPSGLNNTT 261

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+               ++ ++ KG K+ N N  VG      G+KTG T 
Sbjct: 262 -VSTAVDQVKLAKAAMEQPAFREVAAMMEYIDYKGVKHGNWNRLVGHNN-VVGIKTGTTT 319

Query: 223 ASGFNIVASAIQG----DQSLIAVI 243
           ++  N+  +A +      + +I  +
Sbjct: 320 SALGNLSFAAKKDVDGETRRIIGAV 344


>gi|283769461|ref|ZP_06342357.1| serine-type D-Ala-D-Ala carboxypeptidase [Bulleidia extructa W1219]
 gi|283103729|gb|EFC05115.1| serine-type D-Ala-D-Ala carboxypeptidase [Bulleidia extructa W1219]
          Length = 311

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 87/260 (33%), Gaps = 33/260 (12%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               Y ++D     ++        + PASLTKL   +VV    +  +  L   I  ++  
Sbjct: 56  SAKSYAVMDLTNHKILFSKNSYESYVPASLTKL---FVVDYAQQFFQ--LDDYIHANRET 110

Query: 87  SEY--PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKK 133
            +     S++   K +     +    +++ S ND A  +A++           + +  + 
Sbjct: 111 LKMVKKGSSTAHLKSTDYRFKSLAAAMLIPSGNDAAYVLADAIGAKINPKAVDIQQRMEA 170

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP----------- 182
           F +             T   ++ G       T  +D+  +S R+                
Sbjct: 171 FKKGFQEYLNKHQFLGTSIADSSG-YDFKAKTNIQDLIKVSERLLQKDWIRDIISSQSYT 229

Query: 183 -QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
             Y++  +          + N N          GMKTG +  + FN++    +  +  + 
Sbjct: 230 ITYIYPKKQTQTWYNTNDFLNPNSEFY-DKRVKGMKTG-SLGNHFNLITLLEKNKKEYLI 287

Query: 242 VILGALDRNTRNKVSASLLS 261
           ++L +     R   +  L+ 
Sbjct: 288 IVLDSESDKIRYSYTKQLID 307


>gi|213417971|ref|ZP_03351051.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 113

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 6/113 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS- 92
           +D  +G V+AE   D   +PASLTK+MT+YVV   LK  K  LT  +T+ K+A       
Sbjct: 1   MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGNPA 60

Query: 93  -----NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
                    K G  +++ +  K +I++S ND  +A+A+ +  +++ F+  MN 
Sbjct: 61  LRGSSVMFLKPGDQVSVADLNKGIIIQSGNDACIALADYVAGSQESFIGLMNA 113


>gi|237733921|ref|ZP_04564402.1| serine-type D-Ala-D-Ala carboxypeptidase [Mollicutes bacterium D7]
 gi|229383002|gb|EEO33093.1| serine-type D-Ala-D-Ala carboxypeptidase [Coprobacillus sp. D7]
          Length = 184

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 7/182 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++  + + ++++  +      A   +   Y +++ +   VI  +  D+  + AS++K+MT
Sbjct: 6   KKMKLGLIISLMMTLVNTNVSAVPFQGKSYIVMEASHQIVIEGSNQDYIQSVASISKIMT 65

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             +    ++     L T IT+    ++   S      G  ++L + L  L+++S ND AV
Sbjct: 66  CIIAIENME-----LDTIITVDDTINKAWGSGVYIHIGDKISLRDLLYGLMLRSGNDAAV 120

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKT 179
            IA+++ K   KFV  MN+ +K L L +T F N  G+    +G+ +T  DMA L      
Sbjct: 121 MIAKAVGKEIPKFVDMMNDKAKELQLHSTTFSNPTGLDEEDNGNQSTVYDMARLMAYCHQ 180

Query: 180 DF 181
           + 
Sbjct: 181 NP 182


>gi|269102713|ref|ZP_06155410.1| murein-DD-endopeptidase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162611|gb|EEZ41107.1| murein-DD-endopeptidase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 242

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 10/218 (4%)

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALK 109
              AS+TKLMTA V        K  L   IT +K +      + +  + GST++    + 
Sbjct: 1   MPIASITKLMTAMVTLDA----KLPLNEKITFNKADKERMYNNYTRVRLGSTLSRGETIH 56

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           + ++ S N  A A+A       K FV+ MN  +K LG++ T F+++ G+      T +  
Sbjct: 57  IALMSSENLAAAALAGHYPGGSKAFVKAMNAKAKALGMTHTRFVDSSGLDPRNVSTASDV 116

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKK----YPNTNWAVGTFLG-ADGMKTGFTCAS 224
             ++    K    +      +             Y NTN          +  KTG    +
Sbjct: 117 SKLVRAAYKYPQIRKYSTTPVHTAYFGKPNYKLGYTNTNALARGKKWTVNLTKTGHLKVA 176

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           G  +        +  + V+L    + T    +  +   
Sbjct: 177 GHCLAMVTTIQGRKYLMVMLDTQGKLTPVGDAGRIKKW 214


>gi|145496166|ref|XP_001434074.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401197|emb|CAK66677.1| unnamed protein product [Paramecium tetraurelia]
          Length = 496

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 97/305 (31%), Gaps = 48/305 (15%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENY----PDHPWNPASLTK 58
           +         LS      +I        + +                        AS+TK
Sbjct: 188 KIFPNKLTVSLSVHQAIPAIKNKVSAKRWVMFTKQKNEKFFNKQVGWQEFQKGEVASITK 247

Query: 59  LMTAYVVFSFLKEKKAMLTT-PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           +MT Y   ++LKE         I I  +A     +++    G  +T+   L  L++ S N
Sbjct: 248 IMTCYTTLTYLKECNIEPEQIKIKIPGHAECIDGTSAFLNAGGILTIKQLLFALMLPSGN 307

Query: 118 DIAVAIAESL---------------------------------CKTEKKFVQHMNNTSKN 144
           D A+ +  ++                                    +  F+  MN  + +
Sbjct: 308 DAALVLGFTIAYLMILQKTEIYQYNRYLKGAIIDIEPQIERNKKLLKHTFLDQMNKHANS 367

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT---------DFPQYMHYFQIKGLEI 195
           + +  T++ + HG+    + +   D++ L  +                  H    KG + 
Sbjct: 368 IKMENTNYSSVHGLNDEKNVSCPHDISKLIEKCIQLEVFLEIITTKIFKTHALTDKGSKS 427

Query: 196 KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              K+ NTN  +    G  G+KTG T  +G          +   I V+L     N R + 
Sbjct: 428 TFYKWKNTNKLLKK-SGWMGVKTGVTPNAGPCFTGYYKNENLEAIIVVLNCSSMNQRFRD 486

Query: 256 SASLL 260
           +  LL
Sbjct: 487 AEVLL 491


>gi|302519918|ref|ZP_07272260.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
 gi|302428813|gb|EFL00629.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. SPB78]
          Length = 939

 Score = 74.6 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/302 (20%), Positives = 111/302 (36%), Gaps = 22/302 (7%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKK------AMLTTPITISKNASEYPPSNSTFKKGSTM 102
            P   AS+ K+MTAY+V      KK        +          S    S    + G  +
Sbjct: 608 KPVPIASVAKVMTAYLVLRDHPVKKGGDGASITMDQKAEDDAGLSAQNESTVDVRAGQKL 667

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   A++ +++ SAN+IA  +A     +EK FV  MN  +  LG+  T + +  G+    
Sbjct: 668 SQKEAIEAIMLASANNIARQLARWDAGSEKDFVAKMNKAADELGMKNTTYTDPSGL-NKT 726

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L      D            ++  GK   N N  V       G+KTG T 
Sbjct: 727 TVSTAEDQVKLGKVAMKDPLFREVVRMPAYVDSNGKTQTNWNRLVPMNNTV-GIKTGTTT 785

Query: 223 ASGFNIVASAIQG----DQSLIAVILG---ALDRNTRNKVS----ASLLSMGFYNKTDRK 271
           A+G N++ +A +      ++++  +L    A + N+    +     +L+          K
Sbjct: 786 AAGGNLLYAATKEVGGTTRTIVGAVLAQPPAPEDNSILTGALNAGKALIEAAQGTLVAEK 845

Query: 272 KINYIIKD-FYQQNLSNEVPNISEEVCTTQK-EIINYNTQMKEAKDKESHF-IDFEKITL 328
            +            L    P ++ +  T      +    ++ +      H      K+ +
Sbjct: 846 VVKKGDVVGSVDDGLGGTTPVVAAKDLTAVGWPGLTVRLKLVDDGTPPPHEAAAGTKVGV 905

Query: 329 LK 330
           L+
Sbjct: 906 LR 907


>gi|226323178|ref|ZP_03798696.1| hypothetical protein COPCOM_00950 [Coprococcus comes ATCC 27758]
 gi|225208368|gb|EEG90722.1| hypothetical protein COPCOM_00950 [Coprococcus comes ATCC 27758]
          Length = 288

 Score = 74.2 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 91/241 (37%), Gaps = 24/241 (9%)

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTA 167
           +++S ND AVAIAE L  +  +F   MN  ++ +G +  HF+  +G+ +      H  +A
Sbjct: 1   MLESHNDSAVAIAEHLAGSVPQFAGWMNEKAEEIGCTEAHFVTPNGLDEEDVGGVHSISA 60

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEI---------KGKKYPNTNWAVGTFLGADGMKT 218
            D+A +        P+   +  I  +                 N N  +    GA   KT
Sbjct: 61  ADLAKIMSYCVLRSPKAAEFLAITQMPAYSFSDAEGKGNFSCSNHNAFLQMMDGAISGKT 120

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           GFT  +G+  V +     ++ +  +L      ++N +   +  L+  G  +         
Sbjct: 121 GFTGDAGYCYVGALQSEGRTFVVALLACGWPNNKNYKWTDTRKLMEYGMAHYRY------ 174

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
              + ++    +++P  +               ++K  +      +  + +   K ++ +
Sbjct: 175 --AEVWKIPELSKIPVENSVSKNGLFGKTAVEVEIKGKESPGKILVGDDDVAEEKTEVPE 232

Query: 336 K 336
           K
Sbjct: 233 K 233


>gi|269128157|ref|YP_003301527.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Thermomonospora curvata DSM 43183]
 gi|268313115|gb|ACY99489.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Thermomonospora curvata DSM 43183]
          Length = 1003

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 90/220 (40%), Gaps = 12/220 (5%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-------NSTFKKGST 101
            P   AS+ K+MTAYV       +        TIS   +   P        +   + G  
Sbjct: 676 RPIPTASVAKVMTAYVFLKNHPLEPGEDGPTFTISAEEAARLPFRKKRGESHVDVRAGQR 735

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            T   AL+ L+V SAN+IA  +A     +   FV  MN T+K LG+  T + +  G    
Sbjct: 736 FTERKALEALMVVSANNIAHELARWDSGSISAFVAKMNATAKELGMHNTRYTDPSGYDSG 795

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              T A  + +L   ++      +   ++   E  G   P  N  +G + G  G KTG+T
Sbjct: 796 TVSTAADQVKLLRAAMRIPAFAEIVAERVYDPEDGGPVRPAGNVLLGNY-GIVGGKTGYT 854

Query: 222 CASGFNIVASAIQG----DQSLIAVILGALDRNTRNKVSA 257
            A+G N V +A +     D  +I  ++G   R      + 
Sbjct: 855 DAAGGNFVFAARRQVAGVDTLMIGAVMGQHGRAGSALDAM 894


>gi|163815706|ref|ZP_02207078.1| hypothetical protein COPEUT_01887 [Coprococcus eutactus ATCC 27759]
 gi|158449011|gb|EDP26006.1| hypothetical protein COPEUT_01887 [Coprococcus eutactus ATCC 27759]
          Length = 318

 Score = 74.2 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 81/253 (32%), Gaps = 23/253 (9%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 L+D +   +      + P  PASL KL       +       ++     IS   
Sbjct: 59  NAKSLILVDCSDDEIFVSKNENEPQIPASLAKLFVIEYASTLADLDSIVVADYGAIS--- 115

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKKFV 135
              P S+    K     L N    ++V S ND A  +A+              +  + F+
Sbjct: 116 LTKPGSSVAQIKEKEYFLHNLFAAMLVPSGNDAAYVVADYCGGLLSPQAESCQERVRIFM 175

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW---RIKTDFPQYMHYFQIKG 192
           +++N   +  G   T   +  G       TT     ++               + +    
Sbjct: 176 ENLNLHLQQQGYLDTVLYDPSGFDMEALTTTLDLKEVVYRLLEYSWFREIVSQNTYTATL 235

Query: 193 LEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +   + + NTN               G+KTG + +  +N++    Q  +  +   LG+ 
Sbjct: 236 PDGSTQIWQNTNAFLDPTSEYYNENVCGIKTG-SLSDDYNLIVLYQQHGKEFLICSLGSQ 294

Query: 248 DRNTRNKVSASLL 260
             ++R      +L
Sbjct: 295 SDSSRYDDVNFIL 307


>gi|255522654|ref|ZP_05389891.1| D-alanyl-D-alanine carboxypeptidase, putative [Listeria
           monocytogenes FSL J1-175]
          Length = 168

 Score = 73.9 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 3/135 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASLTKLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEPLYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGANFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVV 159
           G+S+ T F++A G+ 
Sbjct: 147 GMSSKTTFVSASGLD 161


>gi|218458344|ref|ZP_03498435.1| putative penicillin-binding protein precursor [Rhizobium etli Kim
           5]
          Length = 122

 Score = 73.5 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/99 (37%), Positives = 52/99 (52%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
             ++    FL+     +   + L+D  TG V+        W PASLTKLMT Y VF  ++
Sbjct: 17  FTVAATAAFLASISLAQANPHILVDVQTGRVLEHEEAFRKWYPASLTKLMTVYTVFDAIR 76

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
             +  L TPI +SK A+  P +   FK G  +TLD+ALK
Sbjct: 77  AGQISLDTPIVMSKRAAAQPAAKMYFKPGQKLTLDSALK 115


>gi|289808199|ref|ZP_06538828.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 83

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 41/79 (51%)

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DG+KTG T  +GFN++ASA+ G + LIAV++GA     R + +  LL  G  N    + 
Sbjct: 1   IDGLKTGHTSGAGFNLIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQI 60

Query: 273 INYIIKDFYQQNLSNEVPN 291
           ++   K   ++    +   
Sbjct: 61  LHSGKKVGSERIWYGDKRK 79


>gi|255017532|ref|ZP_05289658.1| hypothetical protein LmonF_06693 [Listeria monocytogenes FSL
           F2-515]
          Length = 166

 Score = 73.1 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G  + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSANAAAVYSVENGEALYEQNADKVMPIASLSKLMTAFLVLEAVDNNELSWDEKLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                 S     +  T ++ +    ++  SAND A  +          F + MNN +K L
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAAETLG--DRLDGADFPKEMNNQAKKL 146

Query: 146 GLSA-THFMNAHGVV 159
           G+S+ T F++A G+ 
Sbjct: 147 GMSSKTTFVSASGLD 161


>gi|300786276|ref|YP_003766567.1| D-alanyl-D-alanine carboxypeptidase [Amycolatopsis mediterranei
           U32]
 gi|299795790|gb|ADJ46165.1| D-alanyl-D-alanine carboxypeptidase [Amycolatopsis mediterranei
           U32]
          Length = 307

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 6/209 (2%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +       P   AS+TK+MTAYVV              +T+ + A     S         
Sbjct: 66  LGSRGEQRPVPIASVTKVMTAYVVLKDHPLGADEAGPEVTVDEQAEAEATSAEESSAPVR 125

Query: 102 MTLDNALKL----LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                + +     ++V S N++A  +A     ++  FV  MN  +  LG+++T +  A G
Sbjct: 126 AGRRFSERDLLALMLVPSGNNVARLLARWDAGSQDAFVAKMNREAAALGMTSTSYTGASG 185

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           V      T    + +    +K    + +       ++       NTN  +G   G  G+K
Sbjct: 186 VEDSTTSTATDQLRLAREAMKNPVIRAIAATPSLRIDGVPGAVVNTNTLLGH-DGVIGLK 244

Query: 218 TGFTCASGFNIVASAI-QGDQSLIAVILG 245
           TG + A+G  ++ +A  +    ++ V+L 
Sbjct: 245 TGSSTAAGGALMWAAQARDGALILGVVLH 273


>gi|213418400|ref|ZP_03351466.1| D-alanyl-D-alanine carboxypeptidase fraction A [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 109

 Score = 73.1 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 4   FLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
               +    +S            +          Y L+D N+G V+AE   D   +PASL
Sbjct: 39  LTTALCATFISTAHADDLNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADERRDPASL 98

Query: 57  TKLMTAYVV 65
           TK+MT+YV+
Sbjct: 99  TKMMTSYVI 107


>gi|116490237|ref|YP_809781.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
 gi|290889619|ref|ZP_06552709.1| hypothetical protein AWRIB429_0099 [Oenococcus oeni AWRIB429]
 gi|116090962|gb|ABJ56116.1| D-Ala-D-Ala carboxypeptidase A, Serine peptidase, MEROPS family S11
           [Oenococcus oeni PSU-1]
 gi|290480817|gb|EFD89451.1| hypothetical protein AWRIB429_0099 [Oenococcus oeni AWRIB429]
          Length = 440

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 96/264 (36%), Gaps = 33/264 (12%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            I    K     +++  +G VIAE  P+     AS +KL+TAY+V   + E K      I
Sbjct: 46  PIQLKTKAASALVVNFKSGQVIAEKNPNKKLAIASTSKLLTAYLVLKAIHEGKLSWNKKI 105

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK----SANDIAVAIAESLCKTEKKFVQ 136
             ++   +   +               ++ L+      S N   + + +++   + KF +
Sbjct: 106 KANQEIYQLSKNPDLMNVTLYKNGSYTIRQLMNSTLLISTNATGILLGDAVSGNQTKFAE 165

Query: 137 HMNNTSKNLGLSATHFMNAHGV----------------VQHGHYTTARDMAILSWRIKTD 180
            MN T+ + G+  + F   + V                 Q  +  +++ +A +++R+ TD
Sbjct: 166 LMNKTAASFGIPKSEFKFYNAVGISNSYLGSGKLKGVSDQAENLASSKALATIAYRLFTD 225

Query: 181 FPQYMHYFQIKGLEIKG----------KKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIV 229
           +P+ +   Q   L                    N  +          K G +  +G  ++
Sbjct: 226 YPEVIKIIQQPELNFYDSNKKTSFKSATTLNTFNSEISKMKMKFIAAKNGASKKAGSVML 285

Query: 230 ASAIQ--GDQSLIAVILGALDRNT 251
               +   +Q  +++++     + 
Sbjct: 286 GLTDKLGNNQQYLSIVMNGSSYDD 309


>gi|46143271|ref|ZP_00135568.2| COG1686: D-alanyl-D-alanine carboxypeptidase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 251

 Score = 72.7 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 9/237 (3%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + D     ++     ++    AS+TKLMTA +     K K    +      ++      +
Sbjct: 1   MYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISD---QDFDHIKGT 57

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +   K + +  D  LK ++V S N  A A++ S   +  +F+Q MN  ++ LG+ +T F
Sbjct: 58  GTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGMRSTRF 117

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL- 211
            ++ G+      +    + +  + +     Q +   +   + +  +     N +      
Sbjct: 118 SDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSALVREE 177

Query: 212 --GADGMKTGFTCASGFNIVASAIQG-DQSLIAVI-LGALDRNTRNKVSA-SLLSMG 263
              A   KTG+   SG+N+V       + + I VI L      TR+  +   L   G
Sbjct: 178 LFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRSSATRSTFTKNKLEQYG 234


>gi|317472783|ref|ZP_07932094.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
 gi|316899702|gb|EFV21705.1| D-alanyl-D-alanine carboxypeptidase [Anaerostipes sp. 3_2_56FAA]
          Length = 287

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 13/212 (6%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
               L++  T  V+A         PAS+TK+MTA +V    +     L   +TI K+ + 
Sbjct: 78  KEALLVNNTTNQVVAAQKVFDKAYPASITKIMTALLVLENCR-----LDDVVTIDKDITF 132

Query: 89  YPP--SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
             P   +   KKG  +T++  L  LIV SAND A+A+   +  ++KKFV  MN  ++ LG
Sbjct: 133 DDPAAVSLHLKKGDKITVEALLNGLIVMSANDTAIALGRKVAGSDKKFVAMMNKRARELG 192

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
            + T+F N +G+    HYTTA D+ ++      +  ++  +  I G      +Y N    
Sbjct: 193 ATNTNFENPNGLHLKNHYTTAYDLYLIFQ----ELVKHNEFLSIAGKASSYIEYTNQKTN 248

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
               +    + T +  A    +       ++ 
Sbjct: 249 SRHLIWQRPISTCW--AIIIFLTKYLCWEERR 278


>gi|213161756|ref|ZP_03347466.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 147

 Score = 72.7 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 4/101 (3%)

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY----IIKDFYQQNLSNEVPN 291
           D  LI+V+LGA     R   S  LL+ GF        I      + +  +  +       
Sbjct: 1   DMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKREVNLG 60

Query: 292 ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
             +    T       N +     ++       +K  ++   
Sbjct: 61  AGDAGSVTIPRGQLKNLKASFTLNEPQLTAPLKKGQVVGTI 101


>gi|289769992|ref|ZP_06529370.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
 gi|289700191|gb|EFD67620.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 542

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 23/253 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDT--------NTGHV---------IAENY 46
            L++I   ++ ++ P  +             D          +G              + 
Sbjct: 154 ILLVIVFGVVQSMRPLPAPTLDLTAQDSFSFDGGKPQIPWPESGQAALDVQGIGSFGSSG 213

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY+V      K       I I + A +       S      G ++
Sbjct: 214 DQKPVPIASVAKVMTAYLVLRDHPLKSGAEGPKIKIDQAAEDQSQAGQESTVDVFAGDSI 273

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   AL+ +++ SAN++A  +A     +EK FV+ MN  +K+LG++ T + +  G+    
Sbjct: 274 SQREALQAILIASANNVARLLARWDAGSEKAFVEKMNGAAKDLGMTNTTYTDPSGLNNTT 333

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+     +         +   + KG+ + N N  VG   G  G+KTG T 
Sbjct: 334 -VSTAVDQVKLAKAAMKEPAFREVAAMMSYNDYKGENHGNWNQLVGHN-GVVGIKTGTTT 391

Query: 223 ASGFNIVASAIQG 235
           ++  N+V +A + 
Sbjct: 392 SALGNLVFAAKKE 404


>gi|256786097|ref|ZP_05524528.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 577

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 23/253 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDT--------NTGHV---------IAENY 46
            L++I   ++ ++ P  +             D          +G              + 
Sbjct: 189 ILLVIVFGVVQSMRPLPAPTLDLTAQDSFSFDGGKPQIPWPESGQAALDVQGIGSFGSSG 248

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY+V      K       I I + A +       S      G ++
Sbjct: 249 DQKPVPIASVAKVMTAYLVLRDHPLKSGAEGPKIKIDQAAEDQSQAGQESTVDVFAGDSI 308

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   AL+ +++ SAN++A  +A     +EK FV+ MN  +K+LG++ T + +  G+    
Sbjct: 309 SQREALQAILIASANNVARLLARWDAGSEKAFVEKMNGAAKDLGMTNTTYTDPSGLNNTT 368

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+     +         +   + KG+ + N N  VG   G  G+KTG T 
Sbjct: 369 -VSTAVDQVKLAKAAMKEPAFREVAAMMSYNDYKGENHGNWNQLVGHN-GVVGIKTGTTT 426

Query: 223 ASGFNIVASAIQG 235
           ++  N+V +A + 
Sbjct: 427 SALGNLVFAAKKE 439


>gi|21222827|ref|NP_628606.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces coelicolor A3(2)]
 gi|7635949|emb|CAB88446.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           coelicolor A3(2)]
          Length = 832

 Score = 72.3 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 23/253 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDT--------NTGHV---------IAENY 46
            L++I   ++ ++ P  +             D          +G              + 
Sbjct: 444 ILLVIVFGVVQSMRPLPAPTLDLTAQDSFSFDGGKPQIPWPESGQAALDVQGIGSFGSSG 503

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTM 102
              P   AS+ K+MTAY+V      K       I I + A +       S      G ++
Sbjct: 504 DQKPVPIASVAKVMTAYLVLRDHPLKSGAEGPKIKIDQAAEDQSQAGQESTVDVFAGDSI 563

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +   AL+ +++ SAN++A  +A     +EK FV+ MN  +K+LG++ T + +  G+    
Sbjct: 564 SQREALQAILIASANNVARLLARWDAGSEKAFVEKMNGAAKDLGMTNTTYTDPSGLNNTT 623

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             +TA D   L+     +         +   + KG+ + N N  VG   G  G+KTG T 
Sbjct: 624 -VSTAVDQVKLAKAAMKEPAFREVAAMMSYNDYKGENHGNWNQLVGHN-GVVGIKTGTTT 681

Query: 223 ASGFNIVASAIQG 235
           ++  N+V +A + 
Sbjct: 682 SALGNLVFAAKKE 694


>gi|266623881|ref|ZP_06116816.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288864301|gb|EFC96599.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 145

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-------------TNKLPYYTLLDTNTGHVIAENYP 47
           MR    I+   +L     F  +                 +     L+D +TG ++     
Sbjct: 3   MRHKKNILFYFLLCMAVAFTGLTPMTVYGAADWPSEVAMEADGGILMDADTGTILYGKNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE---YPPSNSTFKKGSTMTL 104
           +  + PAS+TKL+TA VV    +     L   +  S+NA         + +   G  M++
Sbjct: 63  NEAYYPASITKLLTAQVVLDRCR-----LDEVVEFSQNAVYNVEQGSKSLSMDTGDRMSV 117

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEK 132
            + L  LI+ SAN++A A+AE    + +
Sbjct: 118 KDCLYGLILHSANEVANALAEHAAGSTE 145


>gi|172058567|ref|YP_001815027.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Exiguobacterium sibiricum 255-15]
 gi|171991088|gb|ACB62010.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Exiguobacterium sibiricum 255-15]
          Length = 421

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 7/209 (3%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFS-FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
                   PAS TKL+TA V +    ++     T  +T S  A     S + F+ G  +T
Sbjct: 198 KESFARRYPASTTKLLTAIVAYDAAAQKGTLDQTFTLTYSMLAVPSGSSTAGFRSGDKVT 257

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +   L  ++++S ND A AIA     +E KFV  MN+ +  +G+SA+HFMN HG     H
Sbjct: 258 MRQLLNGMLIRSGNDAAKAIAVRTAGSESKFVSLMNSRASRIGMSASHFMNPHGFYHPSH 317

Query: 164 YTTARDMAILSWRIKTDFPQYM------HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           YTTA DM  L+                     +KG   +   + +TN ++         K
Sbjct: 318 YTTAADMQKLANTYANYSYLMTVSGRKSFQTTVKGPYARTLTWYHTNTSLPGDTRVYASK 377

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGA 246
           TG+T  S +  V    +G      V L  
Sbjct: 378 TGYTPESAYTRVFFIKKGSTRYGLVTLKG 406


>gi|256390347|ref|YP_003111911.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Catenulispora
           acidiphila DSM 44928]
 gi|256356573|gb|ACU70070.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Catenulispora
           acidiphila DSM 44928]
          Length = 348

 Score = 71.9 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 16/226 (7%)

Query: 42  IAENYP--------DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +               P   AS+ K+MTAYVV              I + + A++     
Sbjct: 103 LWAQNIGSLGSSGDQEPVPIASVAKVMTAYVVLRDHPLSDGQAGPDIVVDQQAADESSLR 162

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIA----ESLCKTEKKFVQHMNNTSKNLGLSA 149
                        + + L+       A  +A         T+  FV  MN  + +LG+  
Sbjct: 163 DESSAPVHAGQHLSERTLLELMLVPSANNVARLLGRWDAGTQDAFVAEMNAAAVSLGMKN 222

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T + +  G+      T    M +    +       +       +            A+  
Sbjct: 223 TTYTDPSGLDSSTRSTAVDQMQLAKVALTDPVLLALTAEPATQVPDDPASLLTNTDALLG 282

Query: 210 FLGADGMKTGFTCASGFNIVASAIQ----GDQSLIAVILGALDRNT 251
             G  G KTG +  +G  ++ +A +     D  ++ V+L      T
Sbjct: 283 SDGVVGGKTGSSTPAGGALMWAAHRTLDGEDHLVLGVVLHQSSGTT 328


>gi|290959626|ref|YP_003490808.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260649152|emb|CBG72266.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces scabiei
           87.22]
          Length = 1000

 Score = 71.5 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 71/366 (19%), Positives = 127/366 (34%), Gaps = 39/366 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL-PYYTL----------------LDTNTGHVIAENY 46
            L++I  A+  ++ P  + A        Y                  +D N    +    
Sbjct: 610 ILLVIVFAVAQSLRPLPAPALALTADESYAFKGGKVDLPWPAEGQGWMDVNGIGTMDSFG 669

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS--------NSTFKK 98
              P    S+ K MTAYV+      K       IT+                  N+  + 
Sbjct: 670 EQKPVAIGSVAKAMTAYVILKDHPMKPGEKGKTITVDAKGETEGGYDKDGESTLNTVKEG 729

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                 D    ++I  + N   +        +EK FV+ MN  +K+LG+  T + +  G+
Sbjct: 730 DELSQYDAIAAIMIPSANNIARLLARWDSKGSEKAFVKKMNAAAKDLGMKNTTYTDPSGL 789

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
            +    +TA D   L   +               ++  GKK+ N N  V  +  A G+KT
Sbjct: 790 KETT-VSTAEDQVKLGNALVRMKALTDITKLPTWVDPSGKKWDNYNRLV-PYNNAIGIKT 847

Query: 219 GFTCASGFNIVASAIQ--GDQSLIAV--ILGALDR---NTRNKVSASLLSMGFYNKTDRK 271
           G T A+G N++ +A Q  G ++ I V  +LG       +T N VS + +       T   
Sbjct: 848 GSTTAAGGNLLFAATQEVGGETAIVVGAVLGQHTPPIIDTVNAVSKTAMIAAQDALTSDT 907

Query: 272 KINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE--KITLL 329
            +          ++ + +   +  V T     + +  +    +      I  E    T++
Sbjct: 908 ILKKGD---VVGHVDDGLGGRTPVVVTKNVSAVGWAGKTVRLELDADATIPHEAKPGTVV 964

Query: 330 KNKITK 335
            + I  
Sbjct: 965 GSLIVG 970


>gi|239942888|ref|ZP_04694825.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
 gi|239989348|ref|ZP_04710012.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
 gi|291446361|ref|ZP_06585751.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291349308|gb|EFE76212.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 320

 Score = 71.5 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 94/234 (40%), Gaps = 16/234 (6%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +       P   AS+TK+MTAYV+      +       +   + A++   S+        
Sbjct: 74  LGTRGEQKPVPIASVTKVMTAYVILKDHPMRAGAPGATVVADQRAADESYSSVETTAPVL 133

Query: 102 MTLDNALKL----LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
              +   +     ++V S N++A  +A      EK FV  MN T+  LG+ AT +    G
Sbjct: 134 AGREYTQRRLLELMMVPSGNNVARLLARWDAGDEKAFVAKMNRTAAGLGMRATTYTGVSG 193

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           +      T A  +A+    +K    + +           G  + NTN  +G   G  G+K
Sbjct: 194 METSTRSTAADQLALARAAMKDPAFRQIVATASVTAPGAGVTFRNTNKLLGH-DGVIGLK 252

Query: 218 TGFTCASGFNIVASAIQG----DQSLIAVILG-------ALDRNTRNKVSASLL 260
           TG +  +G N+V +  Q     D+ ++ V+L        A      ++ S +L+
Sbjct: 253 TGSSTPAGGNLVWATRQKVAGADRLVLGVVLHQRAGTTPAEGSAAAHEASRALI 306


>gi|319940700|ref|ZP_08015042.1| hypothetical protein HMPREF9464_00261 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805851|gb|EFW02618.1| hypothetical protein HMPREF9464_00261 [Sutterella wadsworthensis
           3_1_45B]
          Length = 395

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 61/348 (17%), Positives = 113/348 (32%), Gaps = 36/348 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           M + L  I + + +          +       L+D  +   I  + P  P N +S+  LM
Sbjct: 24  MHRLLTFILLPLFAL--------PSAVAASSVLVDLESSQTILADRPRTPENASSMLPLM 75

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T Y     LK          ++                G  +TL + L+ L++    D  
Sbjct: 76  TVYTTLELLKNGTIKNNLFESV-----------KNPWSGPDITLADLLQGLLMTGDPDAV 124

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
            A+ ++L  +EK F + +N+T+  LG+ AT F            +TA+DMA+L+  + T 
Sbjct: 125 EAVRQTLQLSEKDFSRQLNHTADALGMFATEFTFPCNE-NTPCISTAQDMALLAESLYTH 183

Query: 181 FPQYMHYFQIKGLEIKGKKY-PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD--- 236
                 +     L +   K     N+ +       G+          +  A   +     
Sbjct: 184 HAISRIWGASHSLTLPDGKILHTENFFLEKSPAITGVYVSPKREHIASTAAVLSENPKGS 243

Query: 237 ----QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNI 292
               + L+AV L   DR++  +  +SLL  G+ +    K  +             E  ++
Sbjct: 244 DGRLRRLLAVSLNNNDRDSLRQEISSLLLRGYRDYETLKLYSEGDFVANVPIYKGEETDV 303

Query: 293 SEEV--------CTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
              V         T Q             +         +    +   
Sbjct: 304 RAVVPQTVFITMTTEQMLTAGAKALEVRVRYASPLIAPIKAGQYVGTL 351


>gi|294815047|ref|ZP_06773690.1| Penicillin binding protein PbpA [Streptomyces clavuligerus ATCC
           27064]
 gi|294327646|gb|EFG09289.1| Penicillin binding protein PbpA [Streptomyces clavuligerus ATCC
           27064]
          Length = 698

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 23/295 (7%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK-----KGST 101
           P+     AS  K+MTAYV+      K+      IT+         +    +     +G T
Sbjct: 359 PEKSVPTASTAKIMTAYVLLRKHPLKRGEPGPTITVDAQTVAEGKAKDESRIEGLTEGQT 418

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
            +  + LK+L++ S N+I   +A    KT+    FV+ MN  +K+LG+  T + +  G+ 
Sbjct: 419 FSQQDMLKMLMIPSGNNIGRLLARWSTKTDDQTAFVREMNEAAKDLGMKNTVYTDPSGLD 478

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    T    + +    ++ D  + +       +   G+ Y N +  +   LG  G+KTG
Sbjct: 479 KGTVSTAVDQLKLAEAVMEYDVFRDVVALPNAEIPGHGRIYNNNDRLILAGLGIVGIKTG 538

Query: 220 FTCASGFNIVASAIQ---GDQSLIAVIL---GALDRNTRNKVSASLLSMGFYNKTDRKKI 273
               +G  +  +A +   G+  LI   +    A   +     S  L           +  
Sbjct: 539 SNTPAGGTLSWAAYKTFDGEDRLILGTMMAQHAPGPDINGGDSLVL----------VQDN 588

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +  +    ++ L++       EV     +       +   K  +   +  +K+TL
Sbjct: 589 SRKVVASVREMLTSANVVKKGEVVGHVDDRFGRRIPVVTTKSLDLVGLSGQKVTL 643


>gi|254387565|ref|ZP_05002804.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|326443414|ref|ZP_08218148.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197701291|gb|EDY47103.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 693

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 23/295 (7%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK-----KGST 101
           P+     AS  K+MTAYV+      K+      IT+         +    +     +G T
Sbjct: 354 PEKSVPTASTAKIMTAYVLLRKHPLKRGEPGPTITVDAQTVAEGKAKDESRIEGLTEGQT 413

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
            +  + LK+L++ S N+I   +A    KT+    FV+ MN  +K+LG+  T + +  G+ 
Sbjct: 414 FSQQDMLKMLMIPSGNNIGRLLARWSTKTDDQTAFVREMNEAAKDLGMKNTVYTDPSGLD 473

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    T    + +    ++ D  + +       +   G+ Y N +  +   LG  G+KTG
Sbjct: 474 KGTVSTAVDQLKLAEAVMEYDVFRDVVALPNAEIPGHGRIYNNNDRLILAGLGIVGIKTG 533

Query: 220 FTCASGFNIVASAIQ---GDQSLIAVIL---GALDRNTRNKVSASLLSMGFYNKTDRKKI 273
               +G  +  +A +   G+  LI   +    A   +     S  L           +  
Sbjct: 534 SNTPAGGTLSWAAYKTFDGEDRLILGTMMAQHAPGPDINGGDSLVL----------VQDN 583

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +  +    ++ L++       EV     +       +   K  +   +  +K+TL
Sbjct: 584 SRKVVASVREMLTSANVVKKGEVVGHVDDRFGRRIPVVTTKSLDLVGLSGQKVTL 638


>gi|2764670|emb|CAA04971.1| pbp2 [Streptomyces clavuligerus]
          Length = 696

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 23/295 (7%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK-----KGST 101
           P+     AS  K+MTAYV+      K+      IT+         +    +     +G T
Sbjct: 357 PEKSVPTASTAKIMTAYVLLRKHPLKRGEPGPTITVDAQTVAEGKAKDESRIEGLTEGQT 416

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
            +  + LK+L++ S N+I   +A    KT+    FV+ MN  +K+LG+  T + +  G+ 
Sbjct: 417 FSQQDMLKMLMIPSGNNIGRLLARWSTKTDDQTAFVREMNEAAKDLGMKNTVYTDPSGLD 476

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    T    + +    ++ D  + +       +   G+ Y N +  +   LG  G+KTG
Sbjct: 477 KGTVSTAVDQLKLAEAVMEYDVFRDVVALPNAEIPGHGRIYNNNDRLILAGLGIVGIKTG 536

Query: 220 FTCASGFNIVASAIQ---GDQSLIAVIL---GALDRNTRNKVSASLLSMGFYNKTDRKKI 273
               +G  +  +A +   G+  LI   +    A   +     S  L           +  
Sbjct: 537 SNTPAGGTLSWAAYKTFDGEDRLILGTMMAQHAPGPDINGGDSLVL----------VQDN 586

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +  +    ++ L++       EV     +       +   K  +   +  +K+TL
Sbjct: 587 SRKVVASVREMLTSANVVKKGEVVGHVDDRFGRRIPVVTTKSLDLVGLSGQKVTL 641


>gi|3328163|gb|AAC32488.1| penicillin binding protein PbpA [Streptomyces clavuligerus ATCC
           27064]
          Length = 409

 Score = 70.8 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 58/295 (19%), Positives = 113/295 (38%), Gaps = 23/295 (7%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK-----KGST 101
           P+     AS  K+MTAYV+      K+      IT+         +    +     +G T
Sbjct: 70  PEKSVPTASTAKIMTAYVLLRKHPLKRGEPGPTITVDAQTVAEGKAKDESRIEGLTEGQT 129

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
            +  + LK+L++ S N+I   +A    KT+    FV+ MN  +K+LG+  T + +  G+ 
Sbjct: 130 FSQQDMLKMLMIPSGNNIGRLLARWSTKTDDQTAFVREMNEAAKDLGMKNTVYTDPSGLD 189

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    T    + +    ++ D  + +       +   G+ Y N +  +   LG  G+KTG
Sbjct: 190 KGTVSTAVDQLKLAEAVMEYDVFRDVVALPNAEIPGHGRIYNNNDRLILAGLGIVGIKTG 249

Query: 220 FTCASGFNIVASAIQ---GDQSLIAVIL---GALDRNTRNKVSASLLSMGFYNKTDRKKI 273
               +G  +  +A +   G+  LI   +    A   +     S  L           +  
Sbjct: 250 SNTPAGGTLSWAAYKTFDGEDRLILGTMMAQHAPGPDINGGDSLVL----------VQDN 299

Query: 274 NYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITL 328
           +  +    ++ L++       EV     +       +   K  +   +  +K+TL
Sbjct: 300 SRKVVASVREMLTSANVVKKGEVVGHVDDRFGRRIPVVTTKSLDLVGLSGQKVTL 354


>gi|307324182|ref|ZP_07603390.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
 gi|306889913|gb|EFN20891.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           violaceusniger Tu 4113]
          Length = 886

 Score = 70.4 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 9/204 (4%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTL 104
            P   AS+TK+MTAYVV      K       ITI     + A     S +  K+G T T 
Sbjct: 557 KPVPIASVTKVMTAYVVLKDHPLKGDAEGPKITIDAQAAEEAKSADESRAAVKEGQTFTQ 616

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              L+LL++ S+N+IA  +A     +   FV+ MN+ ++ LG+  T + +  G+ +    
Sbjct: 617 HQLLQLLLINSSNNIARLLARWDAGSLDAFVKKMNDAAEGLGMKQTTYTDPSGLKESTKS 676

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T A  + +    ++++  + +       +   G +  N N  +    G  G+KTG +  +
Sbjct: 677 TAADQLKLAKAAMQSEAFRAVVATPNAEIPGLGDRIYNNNNLLVK-PGVIGIKTGSSTPA 735

Query: 225 GFNIVASAIQ----GDQSLIAVIL 244
           G  ++  A++      Q ++ V+L
Sbjct: 736 GGALMWGAVRTIDGKKQRILGVVL 759


>gi|118587323|ref|ZP_01544750.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni ATCC BAA-1163]
 gi|118432312|gb|EAV39051.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni ATCC BAA-1163]
          Length = 273

 Score = 70.4 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 97/264 (36%), Gaps = 33/264 (12%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT----PITIS 83
                + + + G V+AE   D     AS+TKL+  Y +++ ++  +   T        I+
Sbjct: 9   AASALVAELD-GSVLAEKNADQRVPIASVTKLIIIYQLYAAVERHQLNWTDQLTTTKRIA 67

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +       +     +G T T+ +AL  L++ S N  A   AE L K    + +      +
Sbjct: 68  EFTKGEVVAEIKLTEGETYTVKDALDALLILSENTFAFVFAEKLFKNLTNWHRKTIALLE 127

Query: 144 NLGLSATHFMNAHGVVQHGHYT--------------TARDMAILSWRIKTDFPQYMHYFQ 189
           + G++     N  G+      T              +A+++ I++ +I   FP+ +   Q
Sbjct: 128 SWGINNPIIPNPAGLSNQDLETYKDPEMTDSYEPLFSAKEVLIITEKIVDRFPEVLKIAQ 187

Query: 190 IKGLEI--KGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                     ++YP  N              G+KTG T     ++V       +  + V 
Sbjct: 188 EWKFNFKSNRQEYPYLNRFKFLAITKHKWI-GLKTG-TSPDTESLVGVVQVDQKKFVTVY 245

Query: 244 LGAL----DRNTR--NKVSASLLS 261
           L A     +   R     S  +LS
Sbjct: 246 LAAKIDFLEPKGRNCYVESEKMLS 269


>gi|94991764|ref|YP_599863.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS2096]
 gi|94545272|gb|ABF35319.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS2096]
          Length = 231

 Score = 70.0 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 19/175 (10%)

Query: 2   RQFLVIIAMAMLSNIFPFL--------------SIAETNKLPYYTLLDTNTGHVIAENYP 47
           ++ ++ I   +  ++ P +              +++E N+     ++D N+  ++ ++  
Sbjct: 3   KRIILTIFTFICFSMMPLVHAEDVMDITRQAGYTVSEVNRPKSSIVVDANSSDILWQDNI 62

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS----EYPPSNSTFKKGSTMT 103
           D P +PAS++K+ T Y++F  L + K  + T IT +         Y  SN+    G    
Sbjct: 63  DIPRDPASMSKMFTLYILFEELAKGKITMDTTITATPTDQAIANIYEISNNNIVAGVAYP 122

Query: 104 LDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           + + + +  V S+N   V IA          F+  +N T+K LG++ THF NA G
Sbjct: 123 IRDLITMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASG 177


>gi|116491537|ref|YP_811081.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
 gi|116092262|gb|ABJ57416.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
          Length = 272

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 33/264 (12%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT----PITIS 83
                + + + G V+AE         AS+TKL+  Y +++ ++  +   T        I+
Sbjct: 8   AASALVAELD-GSVLAEKNAHQRVPIASVTKLIIIYQLYAAVERHQLNWTDQLTTTKRIA 66

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +       +     +G T T+ +AL  L++ S N  A   AE L K    + +      +
Sbjct: 67  EFTKGEVVAEIKLTEGETYTVKDALDALLILSENTFAFVFAEKLFKNLTNWHRKTIALLE 126

Query: 144 NLGLSATHFMNAHGVVQHGHYT--------------TARDMAILSWRIKTDFPQYMHYFQ 189
           + G++     N  G+      T              +A+++ I++ +I   FP+ +   Q
Sbjct: 127 SWGINNPIIPNPAGLSNQDLETYKDPEMTDSYEPLFSAKEVLIITEKIVDRFPEVLKIAQ 186

Query: 190 IKGLEI--KGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                     ++YP  N              G+KTG T     + V       +  + V 
Sbjct: 187 EWKFNFKSNRQEYPYLNRFKFLAITKHKWI-GLKTG-TSPDTESFVGIVQSDQKQFVTVY 244

Query: 244 LGAL----DRNTR--NKVSASLLS 261
           L A     +   R     S  +LS
Sbjct: 245 LAAKIDFLEPKGRNCYVESEKMLS 268


>gi|145503045|ref|XP_001437500.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404650|emb|CAK70103.1| unnamed protein product [Paramecium tetraurelia]
          Length = 458

 Score = 70.0 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 57/293 (19%), Positives = 108/293 (36%), Gaps = 45/293 (15%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI----AENYPDHPWNPASLTKLMTAYVVF 66
            +  +I     I        + +   N G  I               AS+TK+MT Y   
Sbjct: 165 VLSISIPVSSKIKHKVSSKKWAIFKRNKGETIFKKIYAYQDQQKSEVASITKVMTCYTTL 224

Query: 67  SFLKEKKAMLTT-PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
            FL+EK+  + +  I I  +A     +++    G  M +   L  +++ S ND A+ ++ 
Sbjct: 225 KFLEEKRIDMESIRIKIPGHAECIDGTSAFLNAGGIMNVRQLLFAMMLPSGNDAALVLSY 284

Query: 126 SL----------------------------CKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           ++                             +   +F+Q MNN ++NL +  T++ + HG
Sbjct: 285 AIAFLKTCDSIQRYCNGHYIDCELEIEKNKFQLRTQFLQMMNNHAENLKMDKTNYNSVHG 344

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----------KGKKYPNTNWAV 207
           +    + + A D+  L         ++M     +  +              K+ NTN  +
Sbjct: 345 LNDTLNVSCALDIFKLVEECI-KIKEFMEIVNTRCFKTYAVTEQGNQGTYYKWKNTNKLL 403

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
               G +G+KTG T  +G          D   I ++L + +   R K +  L+
Sbjct: 404 KK-EGWEGIKTGITSNAGPCFSGYYKTDDFDAIVIVLQSSNMLQRFKDAEILI 455


>gi|326442723|ref|ZP_08217457.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 824

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 8/213 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL------KEKKAMLTTPI 80
           +      +D   G V A      P   AS+TK MTAYV+          +  +  +    
Sbjct: 472 EGQGAVAVDGV-GTV-ATYGDQKPRPIASVTKAMTAYVILREKPLTGKGQGDRITIDQRT 529

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
               ++ +   S    K G   T    L+LL++ SAN++A  +A     +E  FV+ M  
Sbjct: 530 EDEYHSGKNSESVVEVKAGQKYTQRQLLELLMIPSANNVARLLARWHAGSEAAFVKKMQA 589

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            + +LG+  T + +  G+      T    + +    ++ +  + +       +    +  
Sbjct: 590 AADDLGMKDTVYTDPSGLRSTTVSTPLDQLKLAEAAMQDEVFREIVNTTKLKVPGIERTI 649

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            N+        G  G+KTG +  +G N++ SA 
Sbjct: 650 YNSADKALLLDGVGGIKTGSSTPAGGNLLWSAN 682


>gi|294814332|ref|ZP_06772975.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|294326931|gb|EFG08574.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 859

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 8/213 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL------KEKKAMLTTPI 80
           +      +D   G V A      P   AS+TK MTAYV+          +  +  +    
Sbjct: 507 EGQGAVAVDGV-GTV-ATYGDQKPRPIASVTKAMTAYVILREKPLTGKGQGDRITIDQRT 564

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
               ++ +   S    K G   T    L+LL++ SAN++A  +A     +E  FV+ M  
Sbjct: 565 EDEYHSGKNSESVVEVKAGQKYTQRQLLELLMIPSANNVARLLARWHAGSEAAFVKKMQA 624

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            + +LG+  T + +  G+      T    + +    ++ +  + +       +    +  
Sbjct: 625 AADDLGMKDTVYTDPSGLRSTTVSTPLDQLKLAEAAMQDEVFREIVNTTKLKVPGIERTI 684

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            N+        G  G+KTG +  +G N++ SA 
Sbjct: 685 YNSADKALLLDGVGGIKTGSSTPAGGNLLWSAN 717


>gi|254388319|ref|ZP_05003554.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197702041|gb|EDY47853.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 883

 Score = 69.6 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 8/213 (3%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL------KEKKAMLTTPI 80
           +      +D   G V A      P   AS+TK MTAYV+          +  +  +    
Sbjct: 531 EGQGAVAVDGV-GTV-ATYGDQKPRPIASVTKAMTAYVILREKPLTGKGQGDRITIDQRT 588

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
               ++ +   S    K G   T    L+LL++ SAN++A  +A     +E  FV+ M  
Sbjct: 589 EDEYHSGKNSESVVEVKAGQKYTQRQLLELLMIPSANNVARLLARWHAGSEAAFVKKMQA 648

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            + +LG+  T + +  G+      T    + +    ++ +  + +       +    +  
Sbjct: 649 AADDLGMKDTVYTDPSGLRSTTVSTPLDQLKLAEAAMQDEVFREIVNTTKLKVPGIERTI 708

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
            N+        G  G+KTG +  +G N++ SA 
Sbjct: 709 YNSADKALLLDGVGGIKTGSSTPAGGNLLWSAN 741


>gi|290891137|ref|ZP_06554199.1| hypothetical protein AWRIB429_1589 [Oenococcus oeni AWRIB429]
 gi|290479101|gb|EFD87763.1| hypothetical protein AWRIB429_1589 [Oenococcus oeni AWRIB429]
          Length = 273

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 33/264 (12%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT----PITIS 83
                + + + G V+AE         AS+TKL+  Y +++ ++  +   T        I+
Sbjct: 9   AASALVAELD-GSVLAEKNAHQRVPIASVTKLIIIYQLYAAVERHQLNWTDQLTTTKRIA 67

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +       +     +G T T+ +AL  L++ S N  A   AE L K    + +      +
Sbjct: 68  EFTKGEVVAEIKLTEGETYTVKDALDALLILSENTFAFVFAEKLFKNLTNWHRKTIALLE 127

Query: 144 NLGLSATHFMNAHGVVQHGHYT--------------TARDMAILSWRIKTDFPQYMHYFQ 189
           + G++     N  G+      T              +A+++ I++ +I   FP+ +   Q
Sbjct: 128 SWGINNPIIPNPAGLSNQDLETYKDPEMTDSYEPLFSAKEVLIITEKIVDRFPEVLKIAQ 187

Query: 190 IKGLEI--KGKKYPNTNWAV----GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                     ++YP  N              G+KTG T     + V       +  + V 
Sbjct: 188 EWKFNFKSNRQEYPYLNRFKFLAITKHKWI-GLKTG-TSPDTESFVGIVQSDQKQFVTVY 245

Query: 244 LGAL----DRNTR--NKVSASLLS 261
           L A     +   R     S  +LS
Sbjct: 246 LAAKIDFLEPKGRNCYVESEKMLS 269


>gi|266623227|ref|ZP_06116162.1| penicillin-binding protein 5 [Clostridium hathewayi DSM 13479]
 gi|288864998|gb|EFC97296.1| penicillin-binding protein 5 [Clostridium hathewayi DSM 13479]
          Length = 277

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 75/230 (32%), Gaps = 33/230 (14%)

Query: 139 NNTSKNLGLSATHFMNAHGVVQ--------HGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
           N  +++LG S T+F+  +G+            H TTA D+A +        P+   + +I
Sbjct: 1   NQKARDLGCSDTYFITPNGLDASREENGQMKEHSTTAADLARIMNYCIGTSPKKEEFLKI 60

Query: 191 KGLEI---------KGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
            G +          +     N N  +    GA   KTGFT  +G++ V +   G +    
Sbjct: 61  TGTQSYYFTDQEGKRSYNCQNHNALLTMMSGAFSGKTGFTGGAGYSYVGALEDGGREFTI 120

Query: 242 VILGA---LDRNTRNKVSASLLSMGFYNKTDRKKINYIIKD-------------FYQQNL 285
            +LG      +  +   +  L   G  +   R+                          +
Sbjct: 121 ALLGCGWPPHKTYKWSDARKLFGYGMEHYQYREVYQEKTFPEIPVENGVPRSGNPGDPVV 180

Query: 286 SNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITK 335
            +   N+ EE  + +  +          +  ++     +K   +     +
Sbjct: 181 VHAGLNLKEEEKSLKLLMAEDEEVTVSEELPDTLEAPLKKGQTVGTVTYR 230


>gi|301301086|ref|ZP_07207246.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851356|gb|EFK79080.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 129

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 4/123 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           S+     +     +D N+G ++ E   D  +  AS++KL+TAY++   +   +    T +
Sbjct: 4   SVPALTDVKSAIAVDANSGQILYETKEDEVYPVASMSKLLTAYILLDKINHHELSWNTKV 63

Query: 81  TISKNASEYPPSNSTFKKG----STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
             +K  +E   ++           + T+    + ++V SAN  A+ IA ++  ++  FV+
Sbjct: 64  KPTKVEAEISHNSELTNVPLDSTHSYTIKELYQAMLVGSANAAAMVIARAVSGSQTDFVK 123

Query: 137 HMN 139
            M 
Sbjct: 124 LMR 126


>gi|258510359|ref|YP_003183793.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257477085|gb|ACV57404.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 402

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 80/216 (37%), Gaps = 15/216 (6%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFL--------KEKKAMLTTPITISKNASEYPPSNSTFKK 98
           P  P   AS+TK+MTAY+V                        + +       S      
Sbjct: 74  PQVPVPIASVTKVMTAYLVLQKHPLQLGQQGPSITITPDDV-KVYERDKALGQSVVKVAA 132

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
           G  +T   AL+ L++ S N++   +A+    + + FVQ MN T+K LG++ TH+ +  G 
Sbjct: 133 GEQITEYQALEGLLLPSGNNMGTLLAKWCDGSVQAFVQEMNATAKRLGMTETHYADPTGY 192

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
                      M + +       P +         E+          +V       G KT
Sbjct: 193 SPASQSDAVDQMKLFAL--AMQNPVFRQIVGEAQAELPVAGLVYNVDSVVGHGTIIGGKT 250

Query: 219 GFTCASGFNIVASAIQ--GDQS--LIAVILGALDRN 250
           G T  +G   V +A +  G++   +I  +LG     
Sbjct: 251 GSTLEAGGCFVFAARKVIGNREVLIIGAVLGQKGPQ 286


>gi|295114802|emb|CBL35649.1| D-alanyl-D-alanine carboxypeptidase [butyrate-producing bacterium
           SM4/1]
          Length = 205

 Score = 69.6 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
            K  N N     + G  G KTG+T  +G  +V    +    LIAVIL    R T    + 
Sbjct: 3   HKMVNPNNKEYYYEGIVGGKTGYTSLAGNTLVTCVERNGTRLIAVIL--KSRQTHYADTK 60

Query: 258 SLLSMGFY 265
           +LL  GF 
Sbjct: 61  ALLDYGFS 68


>gi|239981571|ref|ZP_04704095.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces albus J1074]
 gi|291453424|ref|ZP_06592814.1| predicted protein [Streptomyces albus J1074]
 gi|291356373|gb|EFE83275.1| predicted protein [Streptomyces albus J1074]
          Length = 907

 Score = 68.9 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 111/311 (35%), Gaps = 31/311 (9%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-----KNASEYPPSNSTF 96
           +       P    S+ K+MTAY +      KK      +TI         +    S    
Sbjct: 572 LGSYGEQKPIPIGSVAKVMTAYTILREHPVKKGTEGERLTIDAKAQQDYENAGQESTVKV 631

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK-KFVQHMNNTSKNLGLSATHFMNA 155
            +G  +++  A++ +++ SAN+IA  +A      ++  FV+ MN  +  LG+  T + + 
Sbjct: 632 TEGQKISVKEAIEAIMLPSANNIARQLARWDSDGDEAAFVEKMNKYAAELGMENTTYTDP 691

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
            G+ +    +    + +    ++ +    +           G++  N N+ V  + G  G
Sbjct: 692 SGLKETTVSSAEDQVKLGKAVMEFETFSSVVRLPNYESTTSGQREKNYNFLVPMY-GVVG 750

Query: 216 MKTGFTCASGFNIVASAIQ--GDQS--LIAVILG------ALDRNTRNKV----SASLLS 261
           +KTG T  +G N++ +A +    +   +I  + G            R+K     +  LL 
Sbjct: 751 IKTGSTTKAGGNLLFAAEKVVDGEKQLIIGAVFGQHAPPILDTATARSKDLILRTQELL- 809

Query: 262 MGFYNKTDRKKINYIIK--DFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
                 T +  +              S      +++V       +     + +      H
Sbjct: 810 ------TSKPVVRKGDVVGHVDDGLGSTTPVVATKDVPAVGWPGLTVKLALDDGGKALPH 863

Query: 320 FID-FEKITLL 329
                 K+ +L
Sbjct: 864 EAKAGTKVGVL 874


>gi|288871041|ref|ZP_06116161.2| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
 gi|288865009|gb|EFC97307.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium hathewayi DSM
           13479]
          Length = 119

 Score = 68.5 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 5/78 (6%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  L+D  TG ++           AS TK+MT  +   +       L+  +T S+N
Sbjct: 43  LYAQSAVLMDAKTGRILYGKNEGVARPMASTTKIMTCIIALEY-----GNLSDTVTASQN 97

Query: 86  ASEYPPSNSTFKKGSTMT 103
           A+  P  +    KG T  
Sbjct: 98  AAAQPKVHLGVYKGQTFR 115


>gi|145523692|ref|XP_001447679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415201|emb|CAK80282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 458

 Score = 68.5 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/278 (19%), Positives = 101/278 (36%), Gaps = 43/278 (15%)

Query: 25  TNKLPYYTLLDTNTGHV----IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT-P 79
                 + +   N G      I           AS+TK+MT Y    FL+EK+  +    
Sbjct: 179 KVSSKKWAIFKRNKGETKFQKIYAFQDQQKSEVASITKVMTCYTTLKFLEEKRIDMEAIR 238

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL------------ 127
           I I  +A     +++    G  M +   L  +++ S ND A+ ++ ++            
Sbjct: 239 IKIPGHAECIDGTSAFLNAGGIMNIKQLLFAMMLPSGNDAALVLSYAIAFLKTCDNIQRY 298

Query: 128 ----------------CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
                            +   +F+Q MNN ++NL +  T++ + HG+    + + A D+ 
Sbjct: 299 FNGHFIDCELEIEKNKFQLRTQFLQMMNNHAENLKMDKTNYNSVHGLNDALNVSCALDIF 358

Query: 172 ILSWRIKTDFPQY---------MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
            L                     +    +G +    K+ NTN  +    G  G+KTG T 
Sbjct: 359 KLVEDCIKIKEFMEIVNTRCFKTYAMTEQGKQGTYYKWKNTNKLLKK-EGWQGIKTGITS 417

Query: 223 ASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
            +G          D   I ++L + +   R K +  L+
Sbjct: 418 NAGPCFSGYYKTDDFDAIVIVLQSSNMLQRFKDAEILI 455


>gi|326777880|ref|ZP_08237145.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           cf. griseus XylebKG-1]
 gi|326658213|gb|EGE43059.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Streptomyces
           cf. griseus XylebKG-1]
          Length = 368

 Score = 68.1 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 9/212 (4%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +       P   AS+TK+MTAYV+      +       +   + A++   S+        
Sbjct: 104 LGTRGEQKPVPIASVTKVMTAYVILKDHPMRADSHGATVVADRRAADESYSSVETTAPVL 163

Query: 102 MTLDNALKL----LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
              +   +     ++V S N++A  +A      E+ FV  MN  +  LG+ AT +    G
Sbjct: 164 AGKEYTQRRLLELMMVPSGNNVARLLARWDAGDEEAFVAKMNRAAAGLGMRATTYTGVSG 223

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           +      T    + +    +K    + +           G  + NTN  +G   G  G+K
Sbjct: 224 MEASTRSTADDQLRLARAAMKDPVFRQVVATASVTAPGAGATFRNTNKLLGR-DGVIGLK 282

Query: 218 TGFTCASGFNIVASAIQ---GDQSLI-AVILG 245
           TG +  +G N+V +  Q   G   LI  V+L 
Sbjct: 283 TGSSTPAGGNLVWATTQKVAGASRLILGVVLH 314


>gi|311893558|dbj|BAJ25966.1| putative peptidase S11 family protein [Kitasatospora setae KM-6054]
          Length = 316

 Score = 67.7 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 9/204 (4%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS----KNASEYPPSNSTFKKGSTMTL 104
            P   AS+TK+MTAYV+      +       I +     + +     S +  ++G  +T 
Sbjct: 60  TPVPIASVTKVMTAYVILRGHPLEDGGQGPRIGVDAAAARESFAPGESTAQLREGQDLTE 119

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              L+L+++ S N++A  +A     +++ FV  MN  +  LG++ T +  A G+ +    
Sbjct: 120 RQLLELMLLPSGNNVARLLARWDSGSQEAFVVKMNRAALELGMTRTTYTGASGLEESTRS 179

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T    + +    +     + +   +   +        NTN  +G   G  G+KTG T A+
Sbjct: 180 TAEDQIRLARAAMGLPVLREVVGMRETTVAGVPGTVVNTNTLLGR-DGVIGLKTGSTTAA 238

Query: 225 GFNIVASAIQ---GDQSLI-AVIL 244
           G N++ +A     G   L+  V+L
Sbjct: 239 GGNLMWAAEVRAGGGVRLVLGVVL 262


>gi|237800748|ref|ZP_04589209.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. oryzae
          str. 1_6]
 gi|331023606|gb|EGI03663.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. oryzae
          str. 1_6]
          Length = 118

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 14/84 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAET--------------NKLPYYTLLDTNTGHVIAENY 46
          M+  L ++ +  +     F + A                       ++D  T  V+  + 
Sbjct: 1  MKIRLSVLGLLCVLTGPVFTTPAFANETAALNRDPSNLHLASGSALVVDLQTDKVLYSSN 60

Query: 47 PDHPWNPASLTKLMTAYVVFSFLK 70
          PD     AS+TKLMTA VV    +
Sbjct: 61 PDVIVPIASVTKLMTAMVVLDAKQ 84


>gi|182437259|ref|YP_001824978.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465775|dbj|BAG20295.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 323

 Score = 67.7 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 9/212 (4%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +       P   AS+TK+MTAYV+      +       +   + A++   S+        
Sbjct: 59  LGTRGEQKPVPIASVTKVMTAYVILKGHPMRADSHGATVVADRRAADESYSSVETTAPVL 118

Query: 102 MTLDNALKL----LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
              +   +     ++V S N++A  +A      E+ FV  MN  +  LG+ AT +    G
Sbjct: 119 AGKEYTQRRLLELMMVPSGNNVARLLARWDAGDEEAFVAKMNRAAAGLGMRATTYTGVSG 178

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           +      T    + +    +K    + +           G  + NTN  +G   G  G+K
Sbjct: 179 METSTRSTADDQLRLARAAMKDPVFRQVVATASVTAPGAGATFRNTNKLLGR-DGVIGLK 237

Query: 218 TGFTCASGFNIVASAIQ---GDQSLI-AVILG 245
           TG +  +G N+V +  Q   G   LI  V+L 
Sbjct: 238 TGSSTPAGGNLVWATTQKVAGASRLILGVVLH 269


>gi|218288202|ref|ZP_03492501.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241561|gb|EED08734.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 402

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 96/311 (30%), Gaps = 32/311 (10%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFL--------KEKKAMLTTPITISKNASEYPPSNSTFKK 98
           P      AS+TK+MTAY+V                        + +       S      
Sbjct: 74  PQVSVPIASVTKVMTAYLVLQKHPLQLGQQGPSITITPDDV-KVYERDKALGQSVVKVAA 132

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
           G  +T   AL+ L++ S N++   +A+    + + FVQ MN T+K LG++ TH+ +  G 
Sbjct: 133 GEKITEYQALQGLLLPSGNNMGTLLAKWCDGSVQAFVQEMNATAKRLGMTETHYADPTGY 192

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
                      M + +     + P +         E+          +V       G KT
Sbjct: 193 SPASQSDAVDQMKLFAL--AMENPVFRQIVGEAQAELPVAGLVYNVDSVVGHGTIIGGKT 250

Query: 219 GFTCASGFNIVASAIQ--GDQS--LIAVILGALDRN----------TRNKVSASLLSMGF 264
           G T  +G   V +A +  G +   +I  +LG               T ++ +   L    
Sbjct: 251 GSTLEAGGCFVFAARKVIGSREVLIIGAVLGQKGPQPLAEALNSAVTMSQDAQKAL---- 306

Query: 265 YNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFE 324
                 + I+             +  ++                Q     D        E
Sbjct: 307 ---QSVQLISAGQTVGTLSAPWAKPVSLVATEPVQVIGWGGLPVQQSYRADVLDPKKPIE 363

Query: 325 KITLLKNKITK 335
              ++     +
Sbjct: 364 PNQVVGQLQIQ 374


>gi|116630239|ref|YP_815411.1| hypothetical protein LGAS_1684 [Lactobacillus gasseri ATCC 33323]
 gi|116095821|gb|ABJ60973.1| hypothetical protein LGAS_1684 [Lactobacillus gasseri ATCC 33323]
          Length = 446

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 19/190 (10%)

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWA------VGT 209
              +  +A D AI+   +   +PQ ++  ++               N NW          
Sbjct: 32  DAENTLSASDRAIIISHLLKKYPQVLNTTKVAKSSFVDGKTITPMQNWNWMLKGLSQYDP 91

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFY 265
               DG+KTG T A+G    ++  +  + L+ V++GA   N    +R   +  LL   F 
Sbjct: 92  NYPVDGLKTGTTDAAGACFASTMKKNGRRLVTVVMGAQHANGEDPSRFIQTKKLLKYIFD 151

Query: 266 NKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ-----MKEAKDKESHF 320
           N + +K          ++         S  V   +  ++    +     +K    K +  
Sbjct: 152 NYSSKKIKQGFSFASVRRVKVINGKEKSAPVYVKEPTVVWLPKKQQLSNLKVKFSKNAIH 211

Query: 321 IDFEKITLLK 330
                   + 
Sbjct: 212 APQISGKTVG 221


>gi|218660191|ref|ZP_03516121.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli IE4771]
          Length = 83

 Score = 67.3 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 26 NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
           K     +++ +TG V+     D  ++PASL KLMT  +VF  + + +  L T   +S+ 
Sbjct: 19 TKAAQAYMIEASTGTVLLAKNEDQGFSPASLAKLMTMNLVFDAVTKGQITLDTEYPVSEY 78

Query: 86 ASEY 89
          A   
Sbjct: 79 AWRT 82


>gi|195940744|ref|ZP_03086126.1| D-alanyl-D-alanine carboxypeptidase fraction A [Escherichia coli
           O157:H7 str. EC4024]
          Length = 141

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 4/99 (4%)

Query: 238 SLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNIS 293
            LI+ ++G      R   S  LL+ GF        +        +  +  +       + 
Sbjct: 1   RLISAVMGGRTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVD 60

Query: 294 EEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           ++V  T       + +     +        +K  ++   
Sbjct: 61  KDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTI 99


>gi|311110174|ref|ZP_07711571.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Lactobacillus gasseri
           MV-22]
 gi|311065328|gb|EFQ45668.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Lactobacillus gasseri
           MV-22]
          Length = 431

 Score = 66.9 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 19/190 (10%)

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI----KGKKYPNTNWA------VGT 209
              +  +A D AI+   +   +PQ ++  ++               N NW          
Sbjct: 17  DAENTLSASDRAIIISHLLKKYPQVLNTTKVAKSSFVDGKTITPMQNWNWMLKGLSQYDP 76

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFY 265
               DG+KTG T A+G    ++  +  + L+ V++GA   N    +R   +  LL   F 
Sbjct: 77  NYPVDGLKTGTTDAAGACFASTMKKNGRRLVTVVMGAQHANGEDPSRFIQTKKLLKYIFD 136

Query: 266 NKTDRKK-----INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHF 320
           N + +K         + +           P   +E            + +K    K +  
Sbjct: 137 NYSSKKIKQGFSFASVRRVKVINGKEKSAPVYVKEPTVVWLPKKQQLSNLKVKFSKNAIH 196

Query: 321 IDFEKITLLK 330
                   + 
Sbjct: 197 APQISGKTVG 206


>gi|218674624|ref|ZP_03524293.1| Serine-type D-Ala-D-Ala carboxypeptidase [Rhizobium etli GR56]
          Length = 248

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 4/139 (2%)

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              F       +GK     N  +  + G DG+ TG+T ASGFN+V++   G++ ++ V+L
Sbjct: 2   YRLFSAASFNFRGKTVRGHNNLMYRYQGMDGINTGYTNASGFNLVSAVRDGNRRVVGVVL 61

Query: 245 GALDRNTRNKVSASLLSMGFYNKTD----RKKINYIIKDFYQQNLSNEVPNISEEVCTTQ 300
           G     +R+   A+LL       +     R   +   K+  +   + +  ++   +   +
Sbjct: 62  GGRTARSRDAKMAALLDRYLGRASSSGGARLVASVGAKEAVEVASAADASDVPVPLNAPR 121

Query: 301 KEIINYNTQMKEAKDKESH 319
                 +  +  A D    
Sbjct: 122 PADDLASKSLAYADDAVVP 140


>gi|331084015|ref|ZP_08333122.1| hypothetical protein HMPREF0992_02046 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330402377|gb|EGG81947.1| hypothetical protein HMPREF0992_02046 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 316

 Score = 66.5 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 23/240 (9%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI--SKNASEYPPSNSTF 96
           G +   N+      P  +T+LMTA +        +  L     I                
Sbjct: 79  GTIPFSNHLYEKIEPGKVTQLMTALLAVE-----RLNLEDEAVIEGDDRVYGKEARGCGL 133

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           ++G  +T+   L  ++V SA D   A+A     +++ FV  MN  +  LG++ TH+ N+ 
Sbjct: 134 QEGYHVTVKQLLNAVLVSSAEDACQALARLTGGSQEAFVTLMNERATELGMTNTHYANST 193

Query: 157 GVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG---- 212
           G      YTT  D+ +L       +P  ++   +    I      +              
Sbjct: 194 GYTSDEQYTTVYDIYLLLNEFL-KYPDLLNAMSLPDYTINYTTPKDELKQRWLDSDNPFT 252

Query: 213 -----------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
                        G KT  + ++ +  + +  +  +  I+++  A   +   +  + +LS
Sbjct: 253 AGKVTIPKDVTVLGGKTFTSKSNNYAALLTQNKYGEFYISIVFHAETESALMERMSEMLS 312


>gi|328887221|emb|CCA60460.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces venezuelae ATCC
           10712]
          Length = 315

 Score = 66.5 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 10/205 (4%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP----SNSTFKKGSTMTL 104
            P   ASLTK+MTA+V+      K       I + + A+        S    + G   + 
Sbjct: 80  RPVPIASLTKVMTAHVILEEHPLKPGESGPMIEVDRQAAYEVGVGGESTVPLQAGRRYSQ 139

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              L++L++ S N++A  +A     T++ F + M  T+  LG+  + +  A G+ +    
Sbjct: 140 RQLLEMLLIPSGNNVARLLARWDSGTQEAFAEKMQRTAGGLGMKDSTYTGASGI-EVTTT 198

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +TA D   L+ +   +                     NTN  + T  G  G+KTG +  +
Sbjct: 199 STAADQLALARKAMKNAVFREIVGTRSVTVPGVGTITNTNPLLDT-PGVVGIKTGSSTPA 257

Query: 225 GFNIVAS--AIQGD--QSLIAVILG 245
           G N++ +     G   + L+  ++ 
Sbjct: 258 GGNLLWACEVRVGGATRLLVGAVMH 282


>gi|94958259|gb|ABF47261.1| penicillin binding protein 4-like protein [Staphylococcus xylosus]
          Length = 326

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 28/254 (11%)

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
             G T T+   L++ +  S+N  A+ + + +      F   MN  +K LG+  THF+N  
Sbjct: 13  YPGETYTVKELLQITVSNSSNAAALILGKEVSGNLSDFTDKMNKKAKALGMENTHFVNPT 72

Query: 157 GVVQHG--------------HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           G   H               + +TA+D  ILS R+  D P+ + + +          Y  
Sbjct: 73  GAENHQLRDFVPKKYKSENDNTSTAKDFGILSQRVVQDTPKILDFTKQLAPTQHSVTYYT 132

Query: 203 TNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDRNTR 252
            N +      +  G DG+KTG +  + +N   +  +    +   I+GA           R
Sbjct: 133 FNHSLEGADMSLEGTDGLKTGSSDVADYNHTITTKRDGFRINQAIMGAGNYDKLGGEKQR 192

Query: 253 NKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKE 312
           N +  +L++M F      K ++   +    +    E     +      K+    + ++  
Sbjct: 193 NMMGNALMNMSFDQYKYEKILSKGEQKINGKTYFVE----KDLYDVLPKDFDKKDYKVVI 248

Query: 313 AKDKESHFIDFEKI 326
             +K     D E I
Sbjct: 249 EDNKAHIEYDREFI 262


>gi|329934220|ref|ZP_08284299.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           griseoaurantiacus M045]
 gi|329305816|gb|EGG49671.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           griseoaurantiacus M045]
          Length = 341

 Score = 65.8 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 27/267 (10%)

Query: 5   LVIIAMAMLSNIFPFLSIAETN----KLPYYTLL-------DTNTGHVIAENYPDHPWNP 53
           L ++A+A+L++     + A +     +     ++       D  T           P   
Sbjct: 51  LAVLAVAVLTSGNSPGAGAGSLPWPPEGQTSVVVEGLGAHGDLGT------RGERTPVPI 104

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISK----NASEYPPSNSTFKKGSTMTLDNALK 109
           AS+TK+MTA+V+      +       +T+ +     +     S+   ++G+ ++    L+
Sbjct: 105 ASVTKVMTAWVILRDRPLRAGEDGPLVTVDRTAANESFSGVESSVPVREGTRLSERRLLE 164

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           LL++ S N+IA  +A     +++ FV  MN  +++LG+  T +  A G+      T+A  
Sbjct: 165 LLLIPSGNNIARLLARWNAGSQEAFVMKMNRAARDLGMRHTTYTGASGIEPTTTSTSADQ 224

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
           + +    +  +  + +       +        NTN  +GT  G  G+KTG +  +G  ++
Sbjct: 225 LRLARRVMHDEVFRTVVAMPGTTVPGVPGTIRNTNTLLGT-AGVIGLKTGSSTPAGGALM 283

Query: 230 ASA---IQGDQ-SLI-AVILGALDRNT 251
            +A     G +  LI  V+L       
Sbjct: 284 WAATASDNGGRDRLILGVVLHQRSGTD 310


>gi|170782312|ref|YP_001710645.1| putative carboxypeptidase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156881|emb|CAQ02049.1| putative carboxypeptidase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 404

 Score = 65.8 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 92/261 (35%), Gaps = 18/261 (6%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD-HPWNPASLTKLMTAYVVFSFLK 70
           +++   P    A+          D     V+A N         AS+TK +TA VV     
Sbjct: 45  VVNVPTPESWPADGVSAVGAIGFDG----VLATNEAAPVSRPMASITKTVTALVVLEAKP 100

Query: 71  EKKAMLTTPITISKNAS-------EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
                    +T +           +          G++++  + L+  ++ SAN+ A A+
Sbjct: 101 LAPGEDGPQVTFTAEDEALRGEILKQDGIVEPAVPGTSLSQRDLLEGALLASANNYAAAL 160

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
                 +   FV   N    + GL+ TH  +A G+      +T  D+  +   +  D   
Sbjct: 161 GVWAYGSNDAFVAAANAWLADQGLTGTHVADAMGL-SPETVSTTADLVRIGEMVLADPVL 219

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI--QGDQ--SL 239
                Q            N N       G  G+KTG    +G  ++ +     GD+  +L
Sbjct: 220 SGIVDQRSADVAGVGTVENRNMLADV-PGFRGIKTGTLEQAGKCLLWAVDTKVGDRDVTL 278

Query: 240 IAVILGALDRNTRNKVSASLL 260
           + V LGA D     +   +LL
Sbjct: 279 VGVTLGARDHAELARQVTALL 299


>gi|256394922|ref|YP_003116486.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Catenulispora
           acidiphila DSM 44928]
 gi|256361148|gb|ACU74645.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Catenulispora
           acidiphila DSM 44928]
          Length = 311

 Score = 65.4 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 90/240 (37%), Gaps = 17/240 (7%)

Query: 37  NTGHVIAENYPDHPW-NPASLTKLMTAYVVFSFLKEKKAM-------LTTPITISKNASE 88
            TG    +  P+      AS+TK+MTAY+V      +              +  +     
Sbjct: 69  ETGQSRVQAGPNQHAAPIASVTKVMTAYLVLRDHPLRAGQDGPALTLTDADVADTAQRRS 128

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
              S      G  +T   AL+ L++ SAN+IAV +A     +  +FV  MN T+++LG+ 
Sbjct: 129 QDQSIVPVAAGEHLTERQALQALLLPSANNIAVVLARWDAGSVDQFVARMNATAQSLGMR 188

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T + +  G  +    T    + I++       P +     +    +           + 
Sbjct: 189 DTRYTDPSGFDEATVSTAVDQVQIVAR--AMRLPVFADIVAMPSAALPVAGTVANTDTLV 246

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQ----GDQSLIAVILGALDRNTRNK---VSASLLS 261
              G  G+KTG   A+G      A++       ++  V+LG    N        + +L+ 
Sbjct: 247 GHDGFVGVKTGSDDAAGGCFAFQAVRTIGGKQTTITGVVLGQPGANQIAAGLMAAKALVD 306


>gi|323359495|ref|YP_004225891.1| D-alanyl-D-alanine carboxypeptidase [Microbacterium testaceum
           StLB037]
 gi|323275866|dbj|BAJ76011.1| D-alanyl-D-alanine carboxypeptidase [Microbacterium testaceum
           StLB037]
          Length = 405

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/339 (16%), Positives = 109/339 (32%), Gaps = 29/339 (8%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGH-------VIAENYPDHPWNPASLTKLMTAYVVFS 67
           +I P  + +         L+    G        V   +  D     AS++KL+TA VV  
Sbjct: 36  SISPGAAASVALPSSGSMLVTVQGGGTYLGADPVTWSSGGDDARPIASISKLVTALVVLD 95

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI-------- 119
                 A    P      A          +  +   + +  KL +  +   +        
Sbjct: 96  AHPLADANDPGPTIAFAEADTDLYDQFYVRGATIARMPDGAKLSLHDALATMLLPSASNY 155

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           AVA+A     +E  +V    +     GL+AT  ++A G+      T +  +A+ +     
Sbjct: 156 AVAVARWAFGSEGAYVDAARSWLTKNGLNATRIVDATGIDDRNTSTPSDLVALGTLAAAN 215

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG---- 235
                +       L        NTN  +GT  G  G+KTG      FN++ +++      
Sbjct: 216 PAIAAIAATPWVNLPAGPGNIENTNVLLGT-SGITGLKTGNLGDGTFNLLFTSVLDVGIG 274

Query: 236 -DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK----DFYQQNLSNEVP 290
               ++ + LG   R + N+    LL          +      +         + +  V 
Sbjct: 275 APLHVLGIRLGGETRASANQDVVVLLESIRDGFHTIQVGTSGAEIGKITTPWGSSAKVVV 334

Query: 291 NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             +  + T     +  +      +     + D EK+  +
Sbjct: 335 GQNASIMTWSDTAVTTHLDTTTPEK----YADGEKVGTI 369


>gi|226323179|ref|ZP_03798697.1| hypothetical protein COPCOM_00951 [Coprococcus comes ATCC 27758]
 gi|225208369|gb|EEG90723.1| hypothetical protein COPCOM_00951 [Coprococcus comes ATCC 27758]
          Length = 196

 Score = 65.0 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                  L+D ++G V+           AS TK+MT  +       K  
Sbjct: 110 LYARSAALVDADSGRVLLGKEEHVMRPMASTTKIMTCILALEKGNPKDL 158


>gi|328480202|gb|EGF49133.1| D-alanyl-D-alanine carboxypeptidase [Lactobacillus rhamnosus MTCC
           5462]
          Length = 180

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 14/130 (10%)

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALD--RNTRNKVSASLLSMGFYNKTDRKKIN 274
           KTG + A+G     +  +    +I V+L A    +  R   +  L++    N       N
Sbjct: 2   KTGTSDAAGDCFTGTVEKNGMRIITVVLHANGDAKTRRFDETKKLMTHVLENWKTITLAN 61

Query: 275 YIIKDFYQQNLSNE---------VPNISEEVCTT---QKEIINYNTQMKEAKDKESHFID 322
                     ++            P+            K+ + Y     +   K +    
Sbjct: 62  AGQSIKGYSKVNVNRGASRTTPIAPSAKAVAVVPADASKKTLKYTYTPAKGVKKNTIEAP 121

Query: 323 FEKITLLKNK 332
            +K T + N 
Sbjct: 122 VKKGTTIGNL 131


>gi|254445424|ref|ZP_05058900.1| FG-GAP repeat domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198259732|gb|EDY84040.1| FG-GAP repeat domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 1459

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 98/340 (28%), Gaps = 65/340 (19%)

Query: 42   IAENYPD-HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN------- 93
            +          + AS+TK MT  +    L+  +  LT  + +S+ A     S        
Sbjct: 1058 LYGKDEHLEERHAASVTKCMTLLLAVEALENGQTELTRMVGVSELAGTNKGSRLLTYNDF 1117

Query: 94   ------------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK----TEKKFVQH 137
                           + G  M L   +  ++ +S N  ++AIA+ + +       +F+  
Sbjct: 1118 GSEIKDDNGDPIYFIQPGDLMPLRLLIAAMMNESCNRSSIAIAQHIAEVVTGDPDRFIIM 1177

Query: 138  MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM-----------AILSWRIKTDFPQYMH 186
            MN+ +  L +  T F    G    G  T  +D+             + +     + +   
Sbjct: 1178 MNDKAAELEMHDTVF----GQPAGGMVTRPQDLITLLLEGSKHPQFVEFGGIARYGEEAP 1233

Query: 187  YFQIKGLEIKGKKYPN----TNWAVGTFLGADGMKTGFTCASGFNIVAS----------- 231
            +  + G    G    N        +G + G    K G          A            
Sbjct: 1234 HDALCGTWNTGDPKCNGPFSKFNTIGNYPGRQMWKGGNIGFWWSGDEAIDVPPRPPGIPY 1293

Query: 232  --------AIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
                    A +  + +   IL   + N R + S  L   GF                   
Sbjct: 1294 STASAVGIAKRAGRDIAIAILQTNNAN-RTEDSQKLFDYGFRKLFTPDLRGSTEYPESGG 1352

Query: 284  NLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
             +  E     +     +    +  T +    D E+  ID 
Sbjct: 1353 LVGAEDQVRVKNFALDRITADSAVTAI--IDDFENIQIDI 1390


>gi|255521429|ref|ZP_05388666.1| D-alanyl-D-alanine carboxypeptidase [Listeria monocytogenes FSL
           J1-175]
          Length = 99

 Score = 65.0 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 43/72 (59%)

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
             KG K  +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A     R 
Sbjct: 26  TDKGAKLESTNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRF 85

Query: 254 KVSASLLSMGFY 265
           K +  L+ +GF 
Sbjct: 86  KDTEKLMEVGFK 97


>gi|148272890|ref|YP_001222451.1| D-alanyl-D-alanine carboxypeptidase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830820|emb|CAN01761.1| probable D-alanyl-D-alanine carboxypeptidase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 404

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 91/261 (34%), Gaps = 18/261 (6%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD-HPWNPASLTKLMTAYVVFSFLK 70
           +++   P     +          D     V+A N         AS+TK +TA VV     
Sbjct: 45  VVAVPTPESWPGDGVSAVGAIGFDG----VLATNEATPVSRPMASITKTVTALVVLKAKP 100

Query: 71  EKKAMLTTPITISKNAS-------EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
                    +T +           +          G++++  + L+  ++ SAN+ A A+
Sbjct: 101 LAPGEDGPQVTFTAEDEALRGEILKQDGIVEPAVAGTSLSQRDLLEGALLASANNYAAAL 160

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
                 +   FV   N      GL+ TH  +A G+      +T  D+  +   +  D   
Sbjct: 161 GVWAYGSNDAFVAAANAWLAEQGLTGTHVADAMGL-SPETVSTTADLVRIGEMVLADPVL 219

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI--QGDQ--SL 239
                Q            N N   G   G  G+KTG    +G  ++ +     GD+  +L
Sbjct: 220 SGIVDQRSADVAGVGTVENRNLLAGV-PGFRGIKTGTLEQAGKCLLWAVDTKVGDRDVTL 278

Query: 240 IAVILGALDRNTRNKVSASLL 260
           + V LGA D     +   +LL
Sbjct: 279 VGVTLGAKDHAELARQVTALL 299


>gi|282852867|ref|ZP_06262208.1| ErfK/YbiS/YcfS/YnhG [Lactobacillus gasseri 224-1]
 gi|282555975|gb|EFB61596.1| ErfK/YbiS/YcfS/YnhG [Lactobacillus gasseri 224-1]
          Length = 365

 Score = 64.6 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 9/134 (6%)

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLS 261
                   DG+KTG T A+G    ++  +  + L+ V++GA   N    +R   +  LL 
Sbjct: 7   QYDPNYPVDGLKTGTTDAAGACFASTMKKNGRRLVTVVMGAQHANGEDPSRFIQTKKLLK 66

Query: 262 MGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQ-----MKEAKDK 316
             F N + +K          ++         S  V   +  ++    +     +K    K
Sbjct: 67  YIFDNYSSKKIKQGFSFASVRRVKVINGKEKSAPVYVKEPTVVWLPKKQQLSNLKVKFSK 126

Query: 317 ESHFIDFEKITLLK 330
            +          + 
Sbjct: 127 NAIHAPQISGKTVG 140


>gi|255024934|ref|ZP_05296920.1| beta-lactamase [Listeria monocytogenes FSL J1-208]
          Length = 135

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  +     G+ + E   D     ASL+KLMTA++V   +   +      + + + 
Sbjct: 29  LSADAAAVYSVENGNPLYEQNADKVMPIASLSKLMTAFLVLEAVDNNELAWDETLDLVRL 88

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
                 S     +  T ++ +    ++  SAND A
Sbjct: 89  DDPSAVSLYAITQKRTWSVRDLYSAMLTMSANDAA 123


>gi|227511783|ref|ZP_03941832.1| possible VGP family vectorial glycosyl polymerization protein
          [Lactobacillus buchneri ATCC 11577]
 gi|227084985|gb|EEI20297.1| possible VGP family vectorial glycosyl polymerization protein
          [Lactobacillus buchneri ATCC 11577]
          Length = 504

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
          F+  I  + +       +   + K     ++D  +G ++ +   DH    ASL+KLMT Y
Sbjct: 37 FVGTILTSSIVIRAKVKNPQYSFKAKEIYVMDAKSGQMLYQKNEDHERPIASLSKLMTLY 96

Query: 64 VV 65
          + 
Sbjct: 97 LA 98


>gi|297200368|ref|ZP_06917765.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
 gi|297147640|gb|EDY53521.2| D-alanyl-D-alanine carboxypeptidase [Streptomyces sviceus ATCC
           29083]
          Length = 813

 Score = 64.2 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 77/363 (21%), Positives = 135/363 (37%), Gaps = 36/363 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDT--------NTGHVIAENYP-------- 47
            L+++A A++ ++ P  +   +         D           G    +           
Sbjct: 426 ILLVVAFAIVQSVRPLPNPTLSLTAEDSYTFDGSKATLPWPTQGQGWMDVNGIGTMGDFG 485

Query: 48  -DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST-------FKKG 99
              P    S+ K MTAY+V      K       IT+   A +    N          K G
Sbjct: 486 KQTPVAIGSVAKAMTAYIVLKDHPLKSGEEGAKITVDALAEKEGGYNKQGESTLNTVKNG 545

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
             +T   A+  +++ SAN+IA  +A     +E  F++ MN+T+K LG+  T + +A G+ 
Sbjct: 546 DVLTQRQAIAAIMIPSANNIARLLARWDSGSEAAFIKKMNDTAKELGMKNTTYTDASGLK 605

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +TA D   L   +             + ++  G+K+ N N+ V  + G  G+KTG
Sbjct: 606 EST-VSTAEDQVKLGNELVKIPALMEITSMGQWIDPSGQKWYNYNYLV-PYTGI-GIKTG 662

Query: 220 FTCASGFNIVASAIQ--GDQSLIAV--ILG---ALDRNTRNKVSASLLSMGFYNKTDRKK 272
            T A+G N++ +A +  G +++  V  ILG   A    T N VS   L          K 
Sbjct: 663 TTSAAGGNLLFAARKKVGGETVTVVGAILGQHKAPIIKTVNDVSKVALLAAEDALKSAKI 722

Query: 273 INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
           +       Y  +       +      T      +  ++  A D   H    +  T + + 
Sbjct: 723 LKKGDVVGYVDDGLGGHTPVVLTKDVTAVGWAGFKVKLSFAADDVPHTA--KAGTKVGSL 780

Query: 333 ITK 335
              
Sbjct: 781 TVG 783


>gi|298345799|ref|YP_003718486.1| hypothetical protein HMPREF0573_10673 [Mobiluncus curtisii ATCC
           43063]
 gi|304390497|ref|ZP_07372450.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315657704|ref|ZP_07910585.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|298235860|gb|ADI66992.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|304326253|gb|EFL93498.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315491707|gb|EFU81317.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 305

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 95/304 (31%), Gaps = 51/304 (16%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----------------------NKLPYYTLLDTNTG 39
           R+ +  +   ++  IF ++                                Y ++D  + 
Sbjct: 5   RKKMTAVFAVVVIAIFAWVVATPAGRGVIRVWIYPKPTTVGIDGTPYTGKGYVVIDEASQ 64

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFK 97
             IA    +    PASL KL  A           A     +++S+       P S+    
Sbjct: 65  QRIAAAGENTEITPASLAKLFVAEYAL-----AVADPNDEVSVSREALTKAKPGSSLAGI 119

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFVQHMNNTSKNLG 146
              T  L + L  ++V S ND A A+AE              +    F+  +    K  G
Sbjct: 120 VPGTYRLQDLLAAMLVPSGNDAAYAVAEFCGGKTHPGTAGTDQRIDLFMTDLAEYLKKQG 179

Query: 147 LSATHFMNAHGVVQHGHYTT----ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
            S T   +  G       T     A    +LS +   D  +    + I  L  +     N
Sbjct: 180 WSHTRINDPSGYDPRAVSTPSEIAAVSEKLLSRQWIRDIVKS-QRYAIAPLSGQHLMMVN 238

Query: 203 TNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           TN       +       G+KTG         +  A +     + V LG+  + +R     
Sbjct: 239 TNQMLNPESIYYIPEVAGLKTGSLGKIHNLAILYA-KSGHDYLIVSLGSTSKASRYDDLN 297

Query: 258 SLLS 261
           +L+S
Sbjct: 298 NLIS 301


>gi|315654470|ref|ZP_07907377.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315491223|gb|EFU80841.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 305

 Score = 64.2 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 90/303 (29%), Gaps = 49/303 (16%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----------------------NKLPYYTLLDTNTG 39
           R+ +  +   ++  IF ++                                Y ++D  + 
Sbjct: 5   RKKMTAVFAVVVIAIFAWVVATPAGRGVIRVWIYPKPTTVGIDGTPYTGKGYVVIDEASQ 64

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFK 97
             IA    +    PASL KL  A           A     +++S+       P S+    
Sbjct: 65  QRIAAAGENTEITPASLAKLFVAEYAL-----AVADPNDEVSVSREALTKAKPGSSLAGI 119

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFVQHMNNTSKNLG 146
              T  L + L  ++V S ND A A+AE              +    F+  +    K  G
Sbjct: 120 VPGTYRLQDLLAAMLVPSGNDAAYAVAEFCGGKTHPGTAGTDQRIDLFMTDLAEYLKKQG 179

Query: 147 LSATHFMNAHGVVQHGHYTT----ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
            S T   +  G       T     A    +LS +   D  +   Y               
Sbjct: 180 WSHTRINDPSGYDPRAVSTPSEIAAVSEKLLSRQWIRDIVKSQRYAIAPLSGQHLMMVNT 239

Query: 203 T---NWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
               N     +     G+KTG         +  A +     + V LG+  + +R     +
Sbjct: 240 NQMLNPQSIYYIPEVAGLKTGSLGKIHNLAILYA-KSGHDYLIVSLGSTSKASRYDDLNN 298

Query: 259 LLS 261
           L+S
Sbjct: 299 LIS 301


>gi|260587695|ref|ZP_05853608.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
 gi|260541960|gb|EEX22529.1| serine-type D-Ala-D-Ala carboxypeptidase [Blautia hansenii DSM
           20583]
          Length = 334

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 23/240 (9%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI--SKNASEYPPSNSTF 96
           G +   N+      P  +T+LMTA +        +  L     I                
Sbjct: 97  GTIPFSNHLYEKTEPGKVTQLMTALLAVE-----RLNLEDEAVIEGDDRVYGKEARGCGL 151

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           ++G  +T+   L  ++V SA D   A+A     +++ FV  MN  +  LG++ TH+ N+ 
Sbjct: 152 QEGYHVTVKQLLNAVLVSSAEDACQALARLTGGSQEAFVTLMNERATELGMTNTHYANST 211

Query: 157 GVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG---- 212
           G      YTT  D+ +L       +P  ++   +    I      +              
Sbjct: 212 GYTSDEQYTTVYDIYLLLNEFL-KYPDLLNAMSLPDYTINYTTPKDELKQRWLDSDNPFT 270

Query: 213 -----------ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
                        G KT  + ++ +  + +  +  +  I+++  A   +   +  + +LS
Sbjct: 271 AGKVTIPKDVTVLGGKTFTSKSNNYAALLTQNKYGEFYISIVFHAETESALMERMSEMLS 330


>gi|269976579|ref|ZP_06183564.1| putative D-alanyl-D-alanine carboxypeptidase [Mobiluncus mulieris
           28-1]
 gi|269935380|gb|EEZ91929.1| putative D-alanyl-D-alanine carboxypeptidase [Mobiluncus mulieris
           28-1]
          Length = 305

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 95/304 (31%), Gaps = 51/304 (16%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----------------------NKLPYYTLLDTNTG 39
           R+ +  +   ++  IF ++                                Y ++D  + 
Sbjct: 5   RKKMTAVFAVVVIAIFAWVVATPAGRGVIRVWIYPKPTTVGIDGTPYTGKGYVVIDEASQ 64

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFK 97
             IA    +    PASL KL  A           A     +++S+       P S+    
Sbjct: 65  QRIAAAGENTEITPASLAKLFVAEYAL-----AVADPNDEVSVSREALTKAKPGSSLAGI 119

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFVQHMNNTSKNLG 146
              T  L + L  ++V S ND A A+AE              +    F+  +    K  G
Sbjct: 120 VPGTYRLQDLLAAMLVPSGNDAAYAVAEFCGGKTHPGTAGTDQRIDLFMTDLAEYLKKQG 179

Query: 147 LSATHFMNAHGVVQHGHYTT----ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
            S T   +  G       T     A    +LS +   D  +    ++I  L  +     N
Sbjct: 180 WSHTRINDPSGYDPRAVSTPSEIAAVSEKLLSRQWIRDIVKS-QRYEIAPLSGQHLMMVN 238

Query: 203 TNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           TN       +       G+KTG         +  A +     + V LG+    +R     
Sbjct: 239 TNQMLNPESIYYIPEVAGLKTGSLGKIHNLAILYA-KSGHDYLIVSLGSTSEASRYDDLN 297

Query: 258 SLLS 261
           +L+S
Sbjct: 298 NLIS 301


>gi|118369246|ref|XP_001017828.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89299595|gb|EAR97583.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 978

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 31/170 (18%)

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +  K FV+ MN  ++ L +  T + N HG+   G+ ++A D   L +   + F  +   
Sbjct: 311 QENMKFFVKIMNQEAQKLQMRNTQYSNPHGLSDKGNKSSAIDYGRLCYAAMSSFALFRQV 370

Query: 188 FQIK-------------------------------GLEIKGKKYPNTNWAVGTFLGADGM 216
            +                                    ++  ++ NTN  +       G+
Sbjct: 371 VKTPLYSCKILLNKDLIQNKKNSLQTPTNQNKTLSVQTMRNAQWENTNKLLLRNSHFIGI 430

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           KTG T  +G  +     +    +  ++L   D   R   S  L    +  
Sbjct: 431 KTGNTPNAGPCLATHYQKNGIDIQVIVLKCKDSEKRWVDSQKLAEWAYQQ 480



 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 3/126 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYV 64
           L I + +         +           +   N   +I           ASLTK+MT + 
Sbjct: 52  LYIASASNSYLSQLLCNNTPLTSALSAAVYCQN--RLIYNKNGSEALEIASLTKVMTFFT 109

Query: 65  VFSFLKEKKAMLTTPI-TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
                 + +    +    + K A+    +++  + G  + L +    L++ S ND A  +
Sbjct: 110 SLKLSAKHELDPQSVYVRVPKAAAFICGTSACLRNGEYIKLCDLFYALMLPSGNDAACTL 169

Query: 124 AESLCK 129
           A    +
Sbjct: 170 ANFFGQ 175


>gi|294629898|ref|ZP_06708458.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
 gi|292833231|gb|EFF91580.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
          Length = 877

 Score = 63.8 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 13/210 (6%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-------STFKKG 99
              P    S+ K MTAY++      K       I +   A +    +       +T K G
Sbjct: 548 EQKPAAIGSVAKTMTAYIILRDHPLKPGEEGPKIKVDATAEKEGGYDKGGESTLNTVKAG 607

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
             +T   AL  +++ SAN+IA  +A     +E  FV+ MN T+K LG++ T + +  G+ 
Sbjct: 608 DFLTEKQALSAVMIPSANNIARLLARWDAGSEAAFVEKMNATAKELGMTRTTYTDPSGLK 667

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +TA+D   L   +  +             +  G+ +PN N      +GA G+KTG
Sbjct: 668 ETT-VSTAQDQVKLGNAVVKNPALVAITSAASWTDPSGRNWPNYNSLPYW-IGAIGIKTG 725

Query: 220 FTCASGFNIVASAIQ--GDQSLIAV--ILG 245
            T A+G N++ +A +  G Q++  V  ILG
Sbjct: 726 TTTAAGGNLLFAARKKVGGQTVTVVGAILG 755


>gi|227874829|ref|ZP_03992982.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|227844604|gb|EEJ54760.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
          Length = 305

 Score = 63.8 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 93/304 (30%), Gaps = 51/304 (16%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----------------------NKLPYYTLLDTNTG 39
           R+ +  +   ++   F ++                                Y ++D  + 
Sbjct: 5   RKKMTAVFAVVVIAFFAWVVATPAGRGVIRVWIYPKPTTVGIDGTPYTGKGYVVIDEASQ 64

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFK 97
             IA    +    PASL KL  A           A     +++S+       P S+    
Sbjct: 65  QRIAAAGENTEITPASLAKLFVAEYAL-----AVADPNDEVSVSREALTKAKPGSSLAGI 119

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFVQHMNNTSKNLG 146
              T  L + L  ++V S ND A A+AE              +    F+  +    K  G
Sbjct: 120 VPGTYRLQDLLAAMLVPSGNDAAYAVAEFCGGKTHPGTAGTDQRIDLFMTDLAEYLKKQG 179

Query: 147 LSATHFMNAHGVVQHGHYTT----ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
            S T   +  G       T     A    +LS +   D  +    + I  L  +     N
Sbjct: 180 WSHTRINDPSGYDPRAVSTPSEIAAVSEKLLSRQWIRDIVKS-QRYAIAPLSGQHLMMVN 238

Query: 203 TNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           TN       +       G+KTG         +  A +     + V LG+    +R     
Sbjct: 239 TNQMLNPESIYYIPEVAGLKTGSLGKIHNLAILCA-KSGHDYLIVSLGSTSEASRYDDLN 297

Query: 258 SLLS 261
           +L+S
Sbjct: 298 NLIS 301


>gi|257487909|ref|ZP_05641950.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. tabaci
          ATCC 11528]
 gi|330883616|gb|EGH17765.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv.
          glycinea str. race 4]
          Length = 118

 Score = 63.5 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 7  IIAMAMLSNIFPFLSIAET---NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           ++   L+N    L+   +          ++D  T  V+  + PD     AS+TKLMTA 
Sbjct: 18 ALSTTTLANESAVLNRDPSNLHLASGSAMVIDLQTDKVLYSSNPDVIVPIASVTKLMTAM 77

Query: 64 VVFSFLK 70
          VV    +
Sbjct: 78 VVLDAKQ 84


>gi|153811401|ref|ZP_01964069.1| hypothetical protein RUMOBE_01793 [Ruminococcus obeum ATCC 29174]
 gi|149832528|gb|EDM87612.1| hypothetical protein RUMOBE_01793 [Ruminococcus obeum ATCC 29174]
          Length = 319

 Score = 63.5 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 80/253 (31%), Gaps = 23/253 (9%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
                 L+D +  ++      +    PASL KL       +       +      I    
Sbjct: 60  NAKSLILVDLSNDNIFISKRENEQQLPASLAKLFVIEYAATLADLDSIVPANYEAI---Q 116

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFV 135
              P S+          L N    ++V S ND A  +A+              +    F+
Sbjct: 117 LTKPGSSVANIDAKKYFLHNLFAAMLVPSGNDAAYVVADYCGSILSPQAKNSQERINVFM 176

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR---DMAILSWRIKTDFPQYMHYFQIKG 192
           +H+NN  +N G   T   +  G   +   T +        L  +           +    
Sbjct: 177 EHLNNYLQNQGYENTILYDPSGYDVNALTTVSDLKSVSTHLLEKQWFRDIVSKSNYTATL 236

Query: 193 LEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +   + + NTN               G+KTG + ++ +N+V    Q  +  +   LG+ 
Sbjct: 237 PDGSTQTWRNTNTFLDQTSEYYNENVKGIKTG-SLSNDYNLVVLYQQHGKEFLICSLGSQ 295

Query: 248 DRNTRNKVSASLL 260
             ++R      +L
Sbjct: 296 SDSSRYDDVNYIL 308


>gi|307699728|ref|ZP_07636784.1| serine-type D-Ala-D-Ala carboxypeptidase [Mobiluncus mulieris
           FB024-16]
 gi|307615090|gb|EFN94303.1| serine-type D-Ala-D-Ala carboxypeptidase [Mobiluncus mulieris
           FB024-16]
          Length = 305

 Score = 63.1 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 94/303 (31%), Gaps = 50/303 (16%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE---------------------TNKLPYYTLLDTNTGH 40
           ++   + A+ +++     ++                              Y ++D  +  
Sbjct: 6   KKMTAVFAVVVIAFFAWVVATPAGRGVIRVWIYPKPTTVGIDGTPYTGKGYVVIDEASQQ 65

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFKK 98
            IA    +    PASL KL  A           A     +++S+       P S+     
Sbjct: 66  RIAAAGENTEITPASLAKLFVAEYAL-----AVADPNDEVSVSREALTKAKPGSSLAGIV 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFVQHMNNTSKNLGL 147
             T  L + L  ++V S ND A A+AE              +    F+  +    K  G 
Sbjct: 121 PGTYRLQDLLAAMLVPSGNDAAYAVAEFCGGKTHPGTAGTDQRIDLFMTDLAEYLKKQGW 180

Query: 148 SATHFMNAHGVVQHGHYTT----ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           S T   +  G       T     A    +LS +   D  +    + I  L  +     NT
Sbjct: 181 SHTRINDPSGYDPRAVSTPSEIAAVSEKLLSRQWIRDIVKS-QRYAIAPLSGQHLMMVNT 239

Query: 204 NWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           N       +       G+KTG         +  A +     + V LG+    +R     +
Sbjct: 240 NQMLNPESIYYIPEVAGLKTGSLGKIHNLAILCA-KSGHDYLIVSLGSTSEASRYDDLNN 298

Query: 259 LLS 261
           L+S
Sbjct: 299 LIS 301


>gi|227872356|ref|ZP_03990707.1| conserved hypothetical protein [Oribacterium sinus F0268]
 gi|227841785|gb|EEJ52064.1| conserved hypothetical protein [Oribacterium sinus F0268]
          Length = 222

 Score = 63.1 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 22/223 (9%)

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVK 114
           TKLMTA V  S ++     L     +S ++      +S    + G ++++ N L  +++ 
Sbjct: 1   TKLMTALVCVSSVE----NLDQEFVVSGSSVIKEAGSSTAFLQVGESLSIRNLLYGMLLP 56

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA--- 171
           S ND AVA+AE+   +   FV  MN  +  LG  ++HF N HG+    HYT+  D+    
Sbjct: 57  SGNDAAVAVAEATAGSVSAFVDRMNEKALELGCLSSHFTNPHGLPDDNHYTSPYDIYLIL 116

Query: 172 --ILSWRIKTDFPQYMHYFQIKGLEIKGKK---------YPNTNWAVGTFLGADGMKTGF 220
              + +    +             +    K         Y      +   L     KTG 
Sbjct: 117 KECMKYDSLREILATKEIQVQYKDKNGIPKSQVWKATNLYSTGEKELPDGLEILAAKTGT 176

Query: 221 TCASGFNIVASAIQGDQ--SLIAVILGALDRNTRNKVSASLLS 261
           T  +G+ +  +  +        +V++   ++    +   +LL 
Sbjct: 177 TKKAGYCLALTVDKASTAIPYYSVVMKGTNKENLYENMTNLLD 219


>gi|306818126|ref|ZP_07451857.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|304649090|gb|EFM46384.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
          Length = 305

 Score = 62.7 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 94/303 (31%), Gaps = 50/303 (16%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAE---------------------TNKLPYYTLLDTNTGH 40
           ++   + A+ +++     ++                              Y ++D  +  
Sbjct: 6   KKMTAVFAVVVIAIFAWVVATPAGRGVIRVWIYPKPTTVGIDGTPYTGKGYVVIDEASQQ 65

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN--ASEYPPSNSTFKK 98
            IA    +    PASL KL  A           A     +++S+       P S+     
Sbjct: 66  RIAAAGENTEITPASLAKLFVAEYAL-----TVADPNDEVSVSREALTKAKPGSSLAGIV 120

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKKFVQHMNNTSKNLGL 147
             T  L + L  ++V S ND A A+AE              +    F+  +    K  G 
Sbjct: 121 PGTYRLQDLLAAMLVPSGNDAAYAVAEFCGGKTHPGTAGTDQRIDLFMTDLAEYLKKQGW 180

Query: 148 SATHFMNAHGVVQHGHYTT----ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           S T   +  G       T     A    +LS +   D  +    + I  L  +     NT
Sbjct: 181 SHTRINDPSGYDPRAVSTPSEIAAVSEKLLSRQWIRDIVKS-QRYAIAPLSGQHLMMVNT 239

Query: 204 NWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
           N       +       G+KTG         +  A +     + V LG+    +R     +
Sbjct: 240 NQMLNPESIYYIPEVAGLKTGSLGKIHNLAILCA-KSGHDYLIVSLGSTSAASRYDDLNN 298

Query: 259 LLS 261
           L+S
Sbjct: 299 LIS 301


>gi|268607998|ref|ZP_06141729.1| Serine-type D-Ala-D-Ala carboxypeptidase [Ruminococcus flavefaciens
           FD-1]
          Length = 172

 Score = 62.7 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 2/161 (1%)

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           +  V +AND    +AE   ++ ++FV+ MN+ + +LGL  T F +  G      YTTA D
Sbjct: 1   MSFVGNANDALTVLAEKSERSAEEFVKRMNSEAFDLGLRDTAFYSPDGYHDDREYTTAHD 60

Query: 170 MAILSWRIK-TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +A++  ++   DF           +     +  N N    T+    G K   +  +G+ I
Sbjct: 61  IAVICAKLAKYDFLAPFFSTWRDFVGEGRTELVNENKLSRTYDQHIGFKAVHSDHTGYCI 120

Query: 229 VASAIQG-DQSLIAVILGALDRNTRNKVSASLLSMGFYNKT 268
                 G     +AV+LGA D +T    +  LL  G+    
Sbjct: 121 AEGGDNGKGMRCVAVVLGAEDADTMYDTAKLLLKKGYTEYK 161


>gi|227541842|ref|ZP_03971891.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227182285|gb|EEI63257.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 222

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 6/139 (4%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            ++    S+ +      + + D +TG + A   P   + PAS+ K++ A V        +
Sbjct: 6   VSVPEGFSLPDGLLAHSFLVFDLDTGDIYAAKDPHGRYRPASIIKVLLASVAID-----R 60

Query: 74  AMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK 133
             LT  + ++  +S+   S++    G   T+D+ L  L++ S ND A AIA+ L   E+ 
Sbjct: 61  LSLTDSMEVTAESSDQEGSSAGIGPGGRYTVDDLLHGLLMASGNDTAHAIAQLLGGDEEA 120

Query: 134 FVQHMNNTSKNLGLSATHF 152
             + +N  + +LG     +
Sbjct: 121 L-RMVNARALDLGPLTPVW 138


>gi|118354439|ref|XP_001010482.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|89292249|gb|EAR90237.1| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 869

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 1/106 (0%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                 +++ D  +G +I           ASLTK+MT YV             +   I  
Sbjct: 92  PISALCWSVTDAVSGQLIYSKMSSEVREMASLTKMMTLYVCHQLSTTYNLNAESEEIIVP 151

Query: 85  NA-SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              +    +++  ++   + L +    L++ S ND AV +A    +
Sbjct: 152 RIAAYTCGTSAFLRENEKLCLQDLYYALMLPSGNDAAVTLAHHFGQ 197



 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 56/149 (37%), Gaps = 13/149 (8%)

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
            +   +FV+ MN  ++ LG+  + F N HG+    + +T  D++ ++  I          
Sbjct: 278 QQYISRFVKEMNKYAQKLGMRDSQFSNCHGLASKSNRSTCEDLSKVALNIIQTPYLQQIC 337

Query: 188 ---------FQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCASGFNIVASAIQG-- 235
                    +     +I+  ++ NTN           G+KTG T  +G  +         
Sbjct: 338 STKNYQCIIYHTIKKDIRKAEWVNTNKLLWDETNSFKGVKTGCTDNAGPCLCVYYKDPIN 397

Query: 236 -DQSLIAVILGALDRNTRNKVSASLLSMG 263
            +  LI  +L   +   R   S++L    
Sbjct: 398 VNIELIVTVLCCRNPERRFDDSSNLARWA 426


>gi|113477326|ref|YP_723387.1| beta-lactamase [Trichodesmium erythraeum IMS101]
 gi|110168374|gb|ABG52914.1| beta-lactamase [Trichodesmium erythraeum IMS101]
          Length = 468

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 9/218 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
           P   L+DT+TG    +   D     AS  KL      F  + + +  L   +T+ ++   
Sbjct: 229 PGVFLIDTDTGA-YVDINGDATMAAASTIKLPILVAFFQAVDQGRIKLNDLLTMKESHVA 287

Query: 89  Y-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               +      GS  T    ++ +I+ S N     + E L        + +N + ++ GL
Sbjct: 288 EGSGNMQFRNPGSKYTALQTVRKMIIISDNTATNMLIEEL-----GGAEILNQSFQSWGL 342

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
             T   N+   +   + TT++D+  L               + +   I  +   N+    
Sbjct: 343 KNTVINNSLPDLSGTNTTTSKDLINLIS-QINQGGLVSLKSRDRLFRIMERTQNNSLLPR 401

Query: 208 GTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           G   G     KTG   +   ++    +   +  +  +L
Sbjct: 402 GVGRGSVVAHKTGNLKSMLADVGMIDLVNGRRYLLAVL 439


>gi|253578339|ref|ZP_04855611.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850657|gb|EES78615.1| D-alanyl-D-alanine carboxypeptidase [Ruminococcus sp. 5_1_39BFAA]
          Length = 320

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 74/240 (30%), Gaps = 24/240 (10%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            ++       L+D +   +      + P  PASL KL       +       ++     I
Sbjct: 29  PDSYNAKSLILVDCSDDEIFVSKNENEPQIPASLAKLFVIEYASTLADLDSIVVADYGAI 88

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTE 131
           S      P S+    K     L N    ++V S ND A  +A+              +  
Sbjct: 89  S---LTKPGSSVAQIKEKEYFLHNLFAAMLVPSGNDAAYVVADYCGGLLSPQAESCQERV 145

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW---RIKTDFPQYMHYF 188
           + F++++N   +  G   T   +  G       TT     ++               + +
Sbjct: 146 RIFMENLNLHLQQQGYLDTVLYDPSGFDMEALTTTLDLKEVVYRLLEYSWFREIVSQNTY 205

Query: 189 QIKGLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                +   + + NTN               G+KTG        IV    Q  + L+ V+
Sbjct: 206 TATLPDGSTQIWQNTNAFLDPTSEYYNENVCGIKTGSLSDDYNLIVL--YQQHRRLLLVM 263


>gi|322374183|ref|ZP_08048716.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C150]
 gi|321276888|gb|EFX53960.1| serine-type D-Ala-D-Ala carboxypeptidase [Streptococcus sp. C150]
          Length = 272

 Score = 62.3 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 31/223 (13%)

Query: 138 MNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFPQ 183
           M    K  G++    +NA G+                  +  + +D+AI++  +  ++P+
Sbjct: 1   MKAQLKKWGITDAKIVNASGLNNSYLGDNIYPGSKSDEENTMSTKDVAIIAQHVIKEYPE 60

Query: 184 YMHYFQIKGLEI-KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQS 238
            +   +    +     K    N+          G DG+KTG T  +G   VA + +   S
Sbjct: 61  ILDITKKTEAKFDGVNKLKTFNYMLKGQPSYRKGVDGLKTGTTDLAGAAFVAHSNESGMS 120

Query: 239 LIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISE 294
           +I VI+ A     D   R   +  LL+   Y+   +            ++ +N +   S+
Sbjct: 121 IITVIINAEHTDTDDYARFTATNDLLNYVVYHWESKTVAKKGQD--IDKSQANVLDGKSK 178

Query: 295 EVCTTQKEIINYNTQMKEAKDK------ESHFIDFEKITLLKN 331
           +V    K   N   ++ +   K             +    +  
Sbjct: 179 QVSAVAKSDFNIIQKIDDDNTKHIKVSTNQIQAPVKSGDKVGT 221


>gi|55823010|ref|YP_141451.1| D-alanyl-D-alanine-carboxypeptidase, penicillin-binding protein,
           truncated [Streptococcus thermophilus CNRZ1066]
 gi|55738995|gb|AAV62636.1| D-alanyl-D-alanine-carboxypeptidase, penicillin-binding protein,
           truncated [Streptococcus thermophilus CNRZ1066]
          Length = 313

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 90/253 (35%), Gaps = 31/253 (12%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG----------- 157
              ++ S     +           K++  MN  SK L ++ T + NA G           
Sbjct: 1   MTSVLSSNVTTVMLANYLTNNDPDKWLDMMNEKSKELSMTNTKWFNASGAAAVAFKGYYS 60

Query: 158 ----VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--- 210
                    + TTARD+ I+++     +P  + Y     + +K        +    +   
Sbjct: 61  PQRYDNNQSNQTTARDLVIMTYNFIKKYPDILKYTSKPVVAVKEGTPYEETFETYNYSIP 120

Query: 211 ------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDRNTRNKVSAS 258
                  G DG KTGF+    FN + +   G+Q +IA+I+G+           R+    +
Sbjct: 121 GANYGLKGVDGSKTGFSPEVAFNYIDTIKHGNQRMIAIIMGSGDWSDQTGEEIRHTFGNA 180

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
           L+   + + + +K ++   ++       N   +I   V   Q+  I+         +   
Sbjct: 181 LVEKMYKDFSYKKVLSKGEQEIA-GKKYNVENDIYATVKKGQEPKISVKDDQIVIDNGLK 239

Query: 319 HFIDFEKITLLKN 331
                 K T +K+
Sbjct: 240 TVSPNIKPTSVKD 252


>gi|55821084|ref|YP_139526.1| D-alanyl-D-alanine-carboxypeptidase, penicillin-binding protein,
           truncated [Streptococcus thermophilus LMG 18311]
 gi|55737069|gb|AAV60711.1| D-alanyl-D-alanine-carboxypeptidase, penicillin-binding protein,
           truncated [Streptococcus thermophilus LMG 18311]
          Length = 313

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 89/253 (35%), Gaps = 31/253 (12%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG----------- 157
              ++ S     +           K++  MN  SK L ++ T + NA G           
Sbjct: 1   MTSVLSSNVTTVMLANYLTNNDPDKWLDMMNEKSKELSMTNTKWFNASGAAAVAFKGYYS 60

Query: 158 ----VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--- 210
                    + TTARD+ I+++     +P  + Y     + +K        +    +   
Sbjct: 61  PQRYDNNQSNQTTARDLVIMTYNFIKKYPDILKYTSKPVVAVKEGTPYEETFETYNYSIP 120

Query: 211 ------LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA------LDRNTRNKVSAS 258
                  G DG KTG +    FN + +   G+Q +IA+I+G+           R+    +
Sbjct: 121 GANYGLKGVDGSKTGSSPEVAFNYIDTIKHGNQRMIAIIMGSGDWSDQTGEEIRHTFGNA 180

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
           L+   + + + +K ++   ++       N   +I   V   Q+  I+         +   
Sbjct: 181 LVEKMYKDFSYKKVLSKGEQEIA-GKKYNVENDIYATVKKGQEPKISVKDDQIVIDNGLK 239

Query: 319 HFIDFEKITLLKN 331
                 K T +K+
Sbjct: 240 TVSPNIKPTSVKD 252


>gi|196232518|ref|ZP_03131370.1| hypothetical protein CfE428DRAFT_4537 [Chthoniobacter flavus
          Ellin428]
 gi|196223280|gb|EDY17798.1| hypothetical protein CfE428DRAFT_4537 [Chthoniobacter flavus
          Ellin428]
          Length = 99

 Score = 61.9 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%)

Query: 7  IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             +A+L  +          +   Y + D+ TG V+ +   D      SLTK+ TA VV 
Sbjct: 6  FALVALLFTLLAVAVPGRAEEAAAYAVTDSTTGFVLDQYRGDKKLPIGSLTKVATAMVVL 65

Query: 67 SFLKEKKAMLTTPITI 82
           +     + L    T+
Sbjct: 66 DWSAASNSNLDQVATV 81


>gi|213025038|ref|ZP_03339485.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 160

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 7/146 (4%)

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL-----SWRI 177
           +A         F++ MN  +K LG++ T F+   G+    + +TARD+  L      + +
Sbjct: 3   LAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGL-SIHNVSTARDLTKLLIATKQYPL 61

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGD 236
                                 + NTN  V          KTGFT A+G  +V   +  +
Sbjct: 62  IGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINN 121

Query: 237 QSLIAVILGALDRNTRNKVSASLLSM 262
           + +  V++ A  + T    ++ L + 
Sbjct: 122 KPVALVVMDAFGKYTHFADASRLRTW 147


>gi|294616051|ref|ZP_06695871.1| D, D-carboxypeptidase, putative [Enterococcus faecium E1636]
 gi|291591087|gb|EFF22776.1| D, D-carboxypeptidase, putative [Enterococcus faecium E1636]
          Length = 309

 Score = 61.5 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 105/311 (33%), Gaps = 57/311 (18%)

Query: 1   MRQFL---VIIAMAMLSNIFPFLSIAETNKLPYY---------TL--------------- 33
           M++FL   +++  +++  +     +      PY           L               
Sbjct: 1   MKRFLKWGLVLLASLIVILMCTAVVISYVNRPYARAVYDRIKRILDKDFYDHLYLGSSFE 60

Query: 34  -LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK---NASEY 89
            ++ +T  + +    D    PASL+KL T              L   ITIS    +  + 
Sbjct: 61  IINLDTMDIHSYMKKDQEELPASLSKLFTIDYAL-----SVLSLDEQITISPTALDMQKA 115

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKKFVQHM 138
             S +  ++G  +++ + +  +++ S ND A ++A               +  + F++++
Sbjct: 116 DSSTAHLQEGDILSVYDIICAMVLPSGNDAAYSLAIYTGGKLDPDAKNDEERYQSFMKNL 175

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF-------PQYMHYFQIK 191
           +      G   THF +A G       T+A D+  ++ ++  +         +      IK
Sbjct: 176 DRYLSEQGYKHTHFTDAAGYDS-NATTSAEDLTKVAAKLLKNDKFAEIVAKETYRAKSIK 234

Query: 192 GLEIKGKKYPNTNWAVGTF--LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           G                 +   G  G+KTG         V      D   + V  G+   
Sbjct: 235 GNVYNWNTTNQFMQQDNRYFTEGVKGVKTGSFDGRYNLCVYYTSSSDNHYLLVSFGSESD 294

Query: 250 NTRNKVSASLL 260
           + R     +LL
Sbjct: 295 SRRYVDVQNLL 305


>gi|213024068|ref|ZP_03338515.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 72

 Score = 61.1 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 22/40 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
             ++D NT  VI  N+PD     AS+TKLMTA VV    
Sbjct: 5  SAMIVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDAR 44


>gi|325473430|gb|EGC76625.1| hypothetical protein HMPREF9353_02420 [Treponema denticola F0402]
          Length = 188

 Score = 60.8 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 9/136 (6%)

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN------TRNKVSA 257
           N  +    G DG+KTGF   SGFNI  +A +  +  IAVILG   +N       R + S 
Sbjct: 6   NTLLKKIEGCDGLKTGFIYESGFNISLTAQKNGERFIAVILGGHGKNFTEGIFKREQNSI 65

Query: 258 SLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKE 317
            L++  F N        +         L + +   +        +       +   K+ E
Sbjct: 66  KLMNFAFDNFKSFDIREHNKIKKSVSVLGSNLNVKTSAFIPLLADEDFSQDYLTVFKNDE 125

Query: 318 SHFIDFEKITLLKNKI 333
            H    E++ +L + I
Sbjct: 126 RH---IEQVIILPDVI 138


>gi|307151215|ref|YP_003886599.1| beta-lactamase [Cyanothece sp. PCC 7822]
 gi|306981443|gb|ADN13324.1| beta-lactamase [Cyanothece sp. PCC 7822]
          Length = 472

 Score = 60.4 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 68/226 (30%), Gaps = 6/226 (2%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +      +   + + D + G+   +     P   AS  K+     +   +   K  L  
Sbjct: 160 LVPKYPKLEARAFFV-DMDNGN-YVDINAQAPIPAASTIKIFVLVALLEQIDAGKVRLDE 217

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            +T++K+       +  ++              ++  +++ A  +            Q +
Sbjct: 218 QLTMTKDIVTSGSGDMQYQPVGKKFTVLETATKMIIISDNTATDML----VKRLGGKQVL 273

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   +  GL+ T   N    ++  + T+ RD+A +  R+       +         ++  
Sbjct: 274 NQRFREWGLTNTIINNILPDLEGTNTTSPRDLAYILMRVNQGELLSLKSRDRMLNIMQQT 333

Query: 199 KYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           K                 KTG       +     +   +  I  ++
Sbjct: 334 KTRTLLPQGLDSDAIIAHKTGDIGTVLGDAGIIDMPNGKRYIGAVM 379


>gi|153853149|ref|ZP_01994558.1| hypothetical protein DORLON_00543 [Dorea longicatena DSM 13814]
 gi|149753935|gb|EDM63866.1| hypothetical protein DORLON_00543 [Dorea longicatena DSM 13814]
          Length = 189

 Score = 60.4 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 9/157 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           + F   + +A        +S  ETN L    L D +   V           PAS TK+MT
Sbjct: 33  KLFASDLCVASGDISLSGISSDETNTLHSAALFDVDRKKVDFSYQMFDKIYPASTTKIMT 92

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEY----PPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           A V           L+  +T+S+NA         +    K G  +TL + L  L++ S N
Sbjct: 93  ALVALENAD-----LSDVVTVSQNADMNSFAADEATCGIKAGDKITLSDLLYGLLLHSGN 147

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
           D A AIAE +  +   F + MN  +  L  + T +  
Sbjct: 148 DNATAIAEYVGGSMDGFAEMMNKEAAKLMATGTQYAR 184


>gi|290958430|ref|YP_003489612.1| peptidoglycan carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260647956|emb|CBG71061.1| putative peptidoglycan carboxypeptidase [Streptomyces scabiei
           87.22]
          Length = 549

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+ + + PFL            ++D  TG  +     D    PAS TK+ TA    S 
Sbjct: 162 ALAAALDPFLKAPVLGPRRAAAVVDVKTGERLYAQNADDALTPASTTKIATAVAALSA 219


>gi|2765071|emb|CAA71324.1| ES-beta-lactamase [Escherichia coli]
          Length = 286

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL--GALDRNTRNKVSASL 259
           +     +   ++ + +  G    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGGQATMDERNRQIAEI 278


>gi|163838956|ref|YP_001623361.1| D-alanyl-D-alanine carboxypeptidase [Renibacterium salmoninarum
           ATCC 33209]
 gi|162952432|gb|ABY21947.1| D-alanyl-D-alanine carboxypeptidase [Renibacterium salmoninarum
           ATCC 33209]
          Length = 324

 Score = 60.4 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 90/264 (34%), Gaps = 26/264 (9%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAENYP 47
           +  L   ++ +L       +I  T                     L+D  T   +     
Sbjct: 7   KLLLAATSIILLVTACATATIGPTVTSDPVAGYSVNWPQSPASIMLVDGKT--PLTNQPA 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEK------KAMLTTPITISKNASEY-PPSNSTFKKGS 100
             P   AS  K++TA  V      K         L      S  A      +     +G 
Sbjct: 65  QQPAPTASTAKIITALTVLKENPLKIGDDGPTIKLGRIDVKSYEAYREANGTVVPVYEGM 124

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++    L+ +++ SAN++A ++A     + + + Q   +  + LGL+ T          
Sbjct: 125 EISQHQILEAMLLPSANNLADSLARWSFGSLEDYRQSAQDFIRELGLTKTTIGIDASGYD 184

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               +TA D+A+L+     +                  K  NTN  +G   G  G+KTG 
Sbjct: 185 PSTQSTATDLAVLAAAAMRNPVIADILGLAAVDGGTMGKLVNTNNLLGQH-GLIGLKTGT 243

Query: 221 TCASG--FNIVASAIQGDQSLIAV 242
           T  +G  F  VA A+     +I V
Sbjct: 244 TPQAGGVFLFVARAVVEGLDVIFV 267


>gi|302532678|ref|ZP_07285020.1| LOW QUALITY PROTEIN: penicillin binding protein PbpA [Streptomyces
           sp. C]
 gi|302441573|gb|EFL13389.1| LOW QUALITY PROTEIN: penicillin binding protein PbpA [Streptomyces
           sp. C]
          Length = 422

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 12/237 (5%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              SI    K      +   +G +        P   AS+ K+MTAYV+      +K    
Sbjct: 57  ALFSIPWPAKGQAAVRV-VGSGTI-GTVGEQKPMPTASVAKIMTAYVILKGHPLRKNEPG 114

Query: 78  -----TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
                    +++  +           G   +  + +K+L++ SAN+IA  +A      ++
Sbjct: 115 PKIEADAKAVAEGNASSESRIEGLTAGQKFSQLDMIKMLMIPSANNIARLLARWDTGGDE 174

Query: 133 -KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
             FV  MN  +K LG++ T + +  G+      T    + +    +K D  + +      
Sbjct: 175 AAFVAKMNAAAKELGMTNTTYTDPSGLDAGTVSTAVDQLKLAEAVMKDDAFRTVVAMPSA 234

Query: 192 GLEIKGKKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASAIQ---GDQSLIAVIL 244
            +E   K   N N   +   L  +G+KTG +  +G  +  +A +   G+  LI   +
Sbjct: 235 PIEGLSKPLINNNGSLLLAGLNINGIKTGSSTPAGGTLSWAAYKTVGGETPLILGTM 291


>gi|145478575|ref|XP_001425310.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392379|emb|CAK57912.1| unnamed protein product [Paramecium tetraurelia]
          Length = 262

 Score = 60.0 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT---------DFP 182
             F+  MN  + ++ +  T++ + HG+    + +   D++ L  +               
Sbjct: 121 HTFLDQMNKHASSIKMENTNYSSVHGLNDEKNVSCPHDISKLIEKCIQLDVFLEIITTKI 180

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              H    KG +    K+ NTN  +    G  G+KTG T  +G          +   I V
Sbjct: 181 FKTHALTDKGGKSTLYKWKNTNKLLKK-SGWMGVKTGVTPNAGPCFTGYYKNDNLEAIIV 239

Query: 243 ILGALDRNTRNKVSASLL 260
           +L     N R + +  LL
Sbjct: 240 VLNCSSMNQRFRDAEVLL 257


>gi|55820180|ref|YP_138622.1| D-alanyl-D-alanine carboxypeptidase, truncated [Streptococcus
           thermophilus LMG 18311]
 gi|55736165|gb|AAV59807.1| D-alanyl-D-alanine carboxypeptidase, truncated [Streptococcus
           thermophilus LMG 18311]
          Length = 273

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 76/224 (33%), Gaps = 31/224 (13%)

Query: 137 HMNNTSKNLGLSATHFMNAHGVV--------------QHGHYTTARDMAILSWRIKTDFP 182
            M    K+ G++    +NA G+                  +  +A+ +A+++  +  ++P
Sbjct: 1   MMKAQLKDWGITDAKIVNASGLNNSYLGNNIYPGSKSDEENTMSAKGVAVIAQHVIKEYP 60

Query: 183 QYMHYFQIKGLEI-KGKKYPNTNWA----VGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           + +   +          K    N+          G DG++TG T  +G + VA + +   
Sbjct: 61  EILDITKKTEANFDGVNKLKTFNYMLKGQPSYRKGVDGLQTGTTDLAGASFVAHSNESGM 120

Query: 238 SLIAVILGAL----DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNIS 293
           S+I VI+ A     D       +  LL+   Y+   +            ++  + +   S
Sbjct: 121 SIITVIINAEHTDTDDYAWFTATNELLNYVVYHWESKTIAKKGQA--ISKSQVDVLDGKS 178

Query: 294 EEVCTTQKEIINYNTQMKEAKDK------ESHFIDFEKITLLKN 331
           ++V    K   N   ++    +K             +    +  
Sbjct: 179 KQVSAVAKSDFNIIQKIDANNNKHIKVTTNQIQSPVKSGDKVGT 222


>gi|325675183|ref|ZP_08154868.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodococcus equi ATCC 33707]
 gi|325553889|gb|EGD23566.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodococcus equi ATCC 33707]
          Length = 469

 Score = 59.6 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           A L  +   L            + D  TG  +    PD P  PAS  K++TA    
Sbjct: 82  AALGAVLAPLVSNPALGAFTGVVADARTGTTLWSRNPDTPMTPASTAKILTAAAAM 137


>gi|254384371|ref|ZP_04999713.1| penicillin binding protein PbpA [Streptomyces sp. Mg1]
 gi|194343258|gb|EDX24224.1| penicillin binding protein PbpA [Streptomyces sp. Mg1]
          Length = 428

 Score = 59.6 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 8/196 (4%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLT-----TPITISKNASEYPPSNSTFKKGST 101
              P   AS+ K+MTAYV+      +              ++  ASE+         G+ 
Sbjct: 89  EQKPVPTASVAKVMTAYVILKSHPLRGGDPGPQIEIDAKAVADGASEHESRVEGLVAGTK 148

Query: 102 MTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            +  + LK+L++ SAN++A  +A       +E  FV+ MN  ++ LG++ T + +  G+ 
Sbjct: 149 FSQQDMLKMLMIPSANNVARLLARWDSGTDSEAAFVEKMNAAARELGMTNTTYTDPSGLD 208

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKT 218
                T A  + +    +K +  + +       ++       N N  +    L   G+KT
Sbjct: 209 AATVSTAADQLKLADAVMKEEAFRAVVALPSAEIKGLSTPLYNNNTLLTVNGLSIRGIKT 268

Query: 219 GFTCASGFNIVASAIQ 234
           G +  +G  ++ +A +
Sbjct: 269 GSSTPAGGALMWAAYK 284


>gi|312138046|ref|YP_004005382.1| d-alanyl-d-alanine carboxypeptidase [Rhodococcus equi 103S]
 gi|311887385|emb|CBH46697.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus equi
           103S]
          Length = 469

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           A L  +   L            + D  TG  +    PD P  PAS  K++TA    
Sbjct: 82  AALGAVLAPLVSNPALGAFTGVVADARTGTTLWSQNPDTPMTPASTAKILTAAAAM 137


>gi|265999457|ref|ZP_06111698.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|263094079|gb|EEZ18001.1| D-alanyl-D-alanine carboxypeptidase 1 [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409094|gb|ADZ66159.1| D-alanyl-D-alanine carboxypeptidase 1, S11 family [Brucella
           melitensis M28]
 gi|326538798|gb|ADZ87013.1| D-alanyl-D-alanine carboxypeptidase [Brucella melitensis M5-90]
          Length = 188

 Score = 59.2 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
           +  + G DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA     R+   A LL+  F  
Sbjct: 1   MYRYAGVDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAGSAGQRDGQMAKLLTR-FGG 59

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVC 297
             + K    +     Q   +   P++  ++ 
Sbjct: 60  VDNGKAAPLVAMAKPQAVTAKLKPDVVADLI 90


>gi|254416694|ref|ZP_05030444.1| beta-lactamase, putative [Microcoleus chthonoplastes PCC 7420]
 gi|196176434|gb|EDX71448.1| beta-lactamase, putative [Microcoleus chthonoplastes PCC 7420]
          Length = 526

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 10/235 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + + +   ++     + P   ++D +TG  + +      +  AS  K+      F  +  
Sbjct: 242 LKAQVQTLVAKNPKLQ-PGVFVVDLDTGAYL-DWQSHSIFPAASTIKVAILVAFFQEVDA 299

Query: 72  KKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
            K  L  P+T+               K G+  +       +I  S N     I   L   
Sbjct: 300 GKIRLDEPLTMEPEMIAKGSGDMQYQKPGTQYSALEVATKMITISDNTATNMIIHRL--- 356

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
               +Q +N    + GL+AT   N    ++  + T ARDMA L +             + 
Sbjct: 357 --GGIQAVNQRFISWGLTATAINNPLPDLEGTNTTNARDMANLLY-KVNQGELLSLRSRD 413

Query: 191 KGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
           + L+I  +   N+    G   GA    KTG   +   ++    +   +  + V L
Sbjct: 414 RLLDIMQRTVNNSLIPQGLDSGATVAHKTGDIGSVLGDVGIVDMPTGKRYLIVTL 468


>gi|20530259|gb|AAM22276.1| beta-lactamase TEM-96 [Escherichia coli]
          Length = 286

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    LG        A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLGRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|256371452|ref|YP_003109276.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256008036|gb|ACU53603.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 416

 Score = 58.8 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 89/246 (36%), Gaps = 15/246 (6%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A A +    P +      +     +     G +     P  P   AS+ K+MTA +    
Sbjct: 58  ATATIPGSAPNVPWPSGGEAAAEIV---GVGRI-GTYGPTTPQTIASVAKMMTALLTIRD 113

Query: 69  LKEKKAMLTTPITISKNASE-------YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
                      ITI+    +          S      G  ++   AL+ L++ SA+++A 
Sbjct: 114 HPLSLGQQGPSITITPEDYQIYLTDKAQNDSVMAVAPGEQLSEYQALEALLIPSADNMAT 173

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +A     +E  FV  MN+ +K LGL+ TH+ +  G+     Y+ A     ++  +  + 
Sbjct: 174 VLATWDAGSESAFVAQMNHEAKVLGLTDTHYGDPSGLSAAT-YSNASSQLRVARLVMANP 232

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL-- 239
                  + +          N N  V    G  G+KTG      F +  +   G  +   
Sbjct: 233 VLASIVSKPQATLPVAGVVYNVNGEVTHH-GIIGVKTGSILTGNFAMACAVHVGTSTYTG 291

Query: 240 IAVILG 245
           + V+L 
Sbjct: 292 LGVVLD 297


>gi|2765069|emb|CAA71323.1| ES-beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 83/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|294852416|ref|ZP_06793089.1| predicted protein [Brucella sp. NVSL 07-0026]
 gi|294821005|gb|EFG38004.1| predicted protein [Brucella sp. NVSL 07-0026]
          Length = 165

 Score = 58.4 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           M TGFT ASG+ +V SA Q  + L   + G      R + +  L+  G     D +    
Sbjct: 1   MGTGFTEASGYALVGSAEQNGRRLFLAMSGLASVKEREEEARKLIQWGMTGFDDMRIFAA 60

Query: 276 IIKDFYQQNLSNE------VPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLL 329
             K    Q    +      V     E+   ++       ++      ++      ++  L
Sbjct: 61  NDKVGDAQVFGGQSSTLPLVVKKDVELLLPKEAREKLKARIIYEGPLQAPIAAGTEVGRL 120


>gi|289549536|ref|YP_003470440.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus lugdunensis HKU09-01]
 gi|289179068|gb|ADC86313.1| D-alanyl-D-alanine carboxypeptidase/Penicillin binding protein PBP4
           [Staphylococcus lugdunensis HKU09-01]
          Length = 125

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 15/103 (14%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI--------------AETNKLPYYTLLDTNTGHVIAENY 46
           ++ F++++ + M+ +     +               A+        +  T  G ++ + +
Sbjct: 4   IKGFVLLLCLCMMFSPLTTYAAKTPTQIAEAEKQHIAQHYNPKSMIVT-TQQGQILYDYH 62

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                +PAS+TKLMT Y+V   + + K  LT  + +S   ++ 
Sbjct: 63  QHDNVDPASITKLMTIYLVLDDIDKGKIKLTDEVKVSGRYAKM 105


>gi|209527557|ref|ZP_03276058.1| beta-lactamase [Arthrospira maxima CS-328]
 gi|209491980|gb|EDZ92334.1| beta-lactamase [Arthrospira maxima CS-328]
          Length = 493

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 74/247 (29%), Gaps = 9/247 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L      ++ A  +  P    LD NTG              AS  K+      F  +   
Sbjct: 232 LKTQLELVAAASPDITPALMFLDLNTGG-YVGLREQSKVPAASTIKVPILVAFFQAVDAG 290

Query: 73  KAMLTTPITISKNASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
           +  L   + +++N              G+  T       ++  S N     I E L    
Sbjct: 291 EIRLDEMLVMTENHQVGEAGIMQYQPPGTEYTALATATKMMTISDNTATNMIIERLGGF- 349

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
               Q +N   ++ GL+ T   N    ++  + TT RDM  L               + +
Sbjct: 350 ----QVLNQKFRSWGLTDTLVRNPLPDIEGTNQTTPRDMVSLLS-QIHQGGLLSMTSRDR 404

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            L I  +   N     G   G     KTG       ++    +   +  I  IL   +  
Sbjct: 405 LLRIMTETENNHLLPSGVSNGAVVAHKTGTLNIMLADVGIVDMPNGKRYILAILAQRNNG 464

Query: 251 TRNKVSA 257
            +   S 
Sbjct: 465 DQAAESM 471


>gi|37575115|gb|AAQ93490.1| class A beta-lactamase TEM-123 [Proteus mirabilis]
          Length = 285

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 83/276 (30%), Gaps = 13/276 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDH 49
           ++ F V +     +   P  +  ET                Y  LD N+G ++    P+ 
Sbjct: 3   IKHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEE 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V S +   +  L   I  S+N        +       MT+     
Sbjct: 63  RFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCS 122

Query: 110 LLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 123 AAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   +  +        Q+       K       +          K+G +      
Sbjct: 183 AMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRG 242

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMG 263
           I+A    G  S I VI     + T ++ +  +  +G
Sbjct: 243 IIALGPDGKPSRIVVIYTTGSQATMDEANRQIAEIG 278


>gi|332708822|ref|ZP_08428793.1| beta-lactamase class A [Lyngbya majuscula 3L]
 gi|332352364|gb|EGJ31933.1| beta-lactamase class A [Lyngbya majuscula 3L]
          Length = 490

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 75/240 (31%), Gaps = 16/240 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-EYPPSN 93
           D +TG  + E+     +  AS  KL      F  +   K +L   IT+          + 
Sbjct: 259 DLDTGAFL-ESNSRLIFPAASTIKLPILIAFFQDVDAGKVLLDEYITMKPEMIAGGSGNM 317

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              K G           +I  S N     + E L       ++ +N   ++ GL  T   
Sbjct: 318 QYQKPGKQYKALEVATKMITISDNTATNMLIERL-----GGIEVLNQRFRSWGLKKTVLR 372

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           N    +   + T+ R++A L               +   ++I  +   NT    G   GA
Sbjct: 373 NPLPDLPGTNTTSPRELASLI-FNLEQGKWISPQSRTDLIDIMIQTKTNTLLPQGLGNGA 431

Query: 214 DGM-KTGFTCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYN 266
               KTG       ++    +   +  I  ++       A        +S  +    F N
Sbjct: 432 TIAHKTGTLGRLLADVGLVKMPNGKRYIISVMVKRPFNDASAEKLIRTISRQVYDY-FNN 490


>gi|71082599|gb|AAZ23494.1| bla-TEM-139 extended spectrum beta-lactamase [Klebsiella
           pneumoniae]
          Length = 286

 Score = 58.4 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  +D N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIEMDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|81365635|gb|AAZ14083.2| TEM-145 [Escherichia coli]
          Length = 286

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLMRSALPAGWFIADKSGAGERGSHGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|209974342|gb|ACJ04051.1| extended-spectrum beta-lactamase TEM-167 [Escherichia coli]
          Length = 286

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 84/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +V         K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSVLPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|27817549|emb|CAA66659.1| beta-lactamase [Pseudomonas aeruginosa]
          Length = 281

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 82/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 3   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGVRVGYIELDLNSGKILESFRPEERFP 62

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 63  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 122

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 123 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 182

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 183 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 242

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 243 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 275


>gi|2765067|emb|CAA71322.1| ES-beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 82/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|14588993|emb|CAC43230.1| TEM-86 ES-beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|18482488|gb|AAL68923.1| TEM-type beta-lactamase [Klebsiella pneumoniae]
 gi|283855865|gb|ADB45252.1| BlaTEM-1 [Serratia marcescens]
          Length = 286

 Score = 58.1 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|213133710|gb|ACJ43254.1| TEM-57 beta-lactamase [Escherichia coli]
          Length = 286

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLDRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|291566346|dbj|BAI88618.1| probable beta-lactamase [Arthrospira platensis NIES-39]
          Length = 498

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 73/247 (29%), Gaps = 9/247 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L N    ++    +  P    LD NTG              AS  K+      F  +   
Sbjct: 232 LKNQLESVAATSPDVSPALMFLDLNTGG-YVGLREQSIVPAASTIKVPILVAFFQAVDAG 290

Query: 73  KAMLTTPITISKNASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
           +  L   + +++N              G+  T       ++  S N     I + L    
Sbjct: 291 EIRLDEMLVMTENHQVGEAGIMQYQPPGTEYTALETATKMMTISDNTATNMIIDRLGGF- 349

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
               Q +N   ++ GL+ T   N    ++  + TT RDM  L               + +
Sbjct: 350 ----QVLNQRFRSWGLTDTMARNPLPDIEGTNKTTPRDMVNLFS-QIHQGGLLSMTSRDR 404

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            L I  +   N     G   G     KTG       ++    +   +  I  IL      
Sbjct: 405 LLRIMTETENNHLLPSGVGNGAVVAHKTGTLNIMLADVGIVDMPNGKRYILAILAERTNG 464

Query: 251 TRNKVSA 257
            +   S 
Sbjct: 465 NQAAESM 471


>gi|284054899|ref|ZP_06385109.1| beta-lactamase [Arthrospira platensis str. Paraca]
          Length = 501

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 73/247 (29%), Gaps = 9/247 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L N    ++    +  P    LD NTG              AS  K+      F  +   
Sbjct: 235 LKNQLESVAATSPDVSPALMFLDLNTGG-YVGLREQSIVPAASTIKVPILVAFFQAVDAG 293

Query: 73  KAMLTTPITISKNASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
           +  L   + +++N              G+  T       ++  S N     I + L    
Sbjct: 294 EIRLDEMLVMTENHQVGEAGIMQYQPPGTEYTALETATKMMTISDNTATNMIIDRLGGF- 352

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
               Q +N   ++ GL+ T   N    ++  + TT RDM  L               + +
Sbjct: 353 ----QVLNQRFRSWGLTDTMARNPLPDIEGTNKTTPRDMVNLFS-QIHQGGLLSMTSRDR 407

Query: 192 GLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
            L I  +   N     G   G     KTG       ++    +   +  I  IL      
Sbjct: 408 LLRIMTETENNHLLPSGVGNGAVVAHKTGTLNIMLADVGIVDMPNGKRYILAILAERTNG 467

Query: 251 TRNKVSA 257
            +   S 
Sbjct: 468 NQAAESM 474


>gi|14588991|emb|CAC43229.1| TEM-85 ES-beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|20302879|gb|AAM18924.1|AF495873_1 extended-spectrum beta-lactamase TEM-101 [Escherichia coli]
          Length = 286

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  ++ +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIVEIG 279


>gi|1524023|emb|CAA64682.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 57.7 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDEQNRQIAEIG 279


>gi|257487910|ref|ZP_05641951.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 191

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 5/157 (3%)

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
            ++ S N  A ++A S       F+  MN  +K LG+  T ++   G+  +   T     
Sbjct: 2   TLMSSENRAAASLAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLT 61

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASG 225
            ++    K      +   + K +  +   Y     NT+  V          KTGFT  +G
Sbjct: 62  KLVMAARKYPMLSELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAG 121

Query: 226 FNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             +V      ++ +  VIL A  + T    ++ +   
Sbjct: 122 HCLVLLTSMANRPVSVVILDAFGKYTHFADASRIRKW 158


>gi|57232518|gb|AAW47922.1| extended-spectrum beta-lactamase TEM-138 [Salmonella enterica]
          Length = 286

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A  + +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPIDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|213422563|ref|ZP_03355628.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 99

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           ++D NT  VI  N+PD     AS+TKLMTA VV         +L   I+ +         
Sbjct: 1   MVDLNTNKVIYSNHPDLVRPIASITKLMTAMVVLDARLPLDEILKVDISQTPE---MKGV 57

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
            S  +  S ++  N L L ++ S N  A ++A          
Sbjct: 58  YSRVRLNSEISRKNMLLLALMSSENRAAASLAHYYPGGYNAL 99


>gi|12005682|gb|AAG44570.1| class A beta-lactamase TEM-87 [Proteus mirabilis]
          Length = 286

 Score = 57.7 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 14/277 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDH 49
           ++ F V +     +   P  +  ET                Y  LD N+G ++    P+ 
Sbjct: 3   IKHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEE 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V S +   +  L   I  S+N        +       MT+     
Sbjct: 63  RFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCS 122

Query: 110 LLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++   ++   F+ +M +    L         A    +    T A
Sbjct: 123 AAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLHCWEPELNEAIPNDERDTTTPA 182

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   +  +        Q+       K       +          K+G        
Sbjct: 183 AMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRG 242

Query: 228 IVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 243 IIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|16798372|gb|AAL29434.1|AF427128_1 inhibitor-resistant beta-lactamase TEM-82 [Escherichia coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDEQNRQIAEIG 279


>gi|89077562|gb|ABD60314.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGANERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|33322449|gb|AAQ06951.1|AF496279_1 d-alanyl-D-alanine carboxypeptidase precursor [Lactobacillus
           delbrueckii subsp. lactis]
          Length = 103

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 4/103 (3%)

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN----TRNKVSASLLSMGFYNKTDR 270
           G+KTG T  +G     +  +    +I V+LGA   N    +R   +A L+   + N T  
Sbjct: 1   GLKTGTTDKAGACFAGTVKKNGHRIITVVLGAKHANSQDPSRFVQTAKLMHYVYQNYTAV 60

Query: 271 KKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEA 313
                            E    S +V   +   I      K  
Sbjct: 61  TLKKGSSISGANTVKVPEGKETSSKVVLDKTVTIWAKQGSKLQ 103


>gi|29650764|gb|AAO85882.1| beta-lactamase TEM-120 [Klebsiella oxytoca]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|46370393|gb|AAS89982.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+++M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLRNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|13676302|gb|AAK33121.1| extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 277

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 81/271 (29%), Gaps = 17/271 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSA 257
           +     +   ++ + + G+    + RN+  A
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIA 276


>gi|16798374|gb|AAL29435.1|AF427129_1 inhibitor-resistant beta-lactamase TEM-83 [Escherichia coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRCEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDEQNRQIAEIG 279


>gi|56181496|gb|AAV83795.1| extended-spectrum beta-lactamase TEM-136 [Klebsiella pneumoniae]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 78/273 (28%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSRGIIA 245

Query: 231 SAIQGDQS----LIAVILGALDRNTRNKVSASL 259
           +     +     +I    G    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGGQATMDERNRQIAEI 278


>gi|237846383|gb|ACR22829.1| beta-lactamase TEM-168 [Escherichia coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|194022467|gb|ACF32746.1| putative inhibitor-resistant TEM-163 beta-lactamase [Escherichia
           coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDEQNRQIAEIG 279


>gi|37693755|gb|AAQ98890.1| inhibitor-resistant beta-lactamase TEM [Escherichia coli]
          Length = 286

 Score = 57.3 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDEQNRQIAEIG 279


>gi|254383787|ref|ZP_04999135.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. Mg1]
 gi|194342680|gb|EDX23646.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. Mg1]
          Length = 443

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 14/211 (6%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS--------KNASEYPPSNSTFKK 98
              P    S+ K MTAYV+      KK      I +         K +      N+  + 
Sbjct: 113 EQKPVAIGSVAKAMTAYVILKGHPLKKGEKGAMIDVDKAAVEDGKKESEGESTVNTLKEG 172

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
           G     D    ++I  + N   +         ++ FV+ MN+ +K LG++ T + +  G+
Sbjct: 173 GQISEYDALAAIMIPSANNVARLLARWDAGGDQEAFVKKMNDAAKELGMTNTTYTDPSGL 232

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
                 +TA D   L  +I                +  GK + N N  +  F G+ G+KT
Sbjct: 233 DATT-VSTAEDQVKLGLKIVEMPELIAITRLPNWTDASGKSWRNYN-DLIPFNGSLGIKT 290

Query: 219 GFTCASGFNIVASAIQG----DQSLIAVILG 245
           G T  +G N++ +A +     +Q ++  +LG
Sbjct: 291 GSTTKAGGNLLFAAEKKVGKTNQLVVGAVLG 321


>gi|161367442|gb|ABX71157.1| extended-spectrum beta-lactamase TEM-162 [Klebsiella pneumoniae]
          Length = 286

 Score = 57.3 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQVGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + RN+ +A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQTAEI 278


>gi|186682632|ref|YP_001865828.1| beta-lactamase [Nostoc punctiforme PCC 73102]
 gi|186465084|gb|ACC80885.1| beta-lactamase [Nostoc punctiforme PCC 73102]
          Length = 520

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 7/236 (2%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +  L N    L+    N  P   L+D +TG+   +      +  AS  K+      F  +
Sbjct: 192 LISLKNAVQNLAANYPNLAPGVFLVDLDTGN-YVDVNGSTSFPAASTIKVPILLAFFQDV 250

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              K  L   +T+ ++       +   K   T      +   ++  +++ A  +  +   
Sbjct: 251 DAGKIRLDEMLTMQQDMVAGGSGDMGSKPAGTKYNALEVVTKMITISDNTATNMLIARLG 310

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
             +     +N   +  GL+ T   N+   +Q  + T+ +++A L   +       M    
Sbjct: 311 GMEA----LNQRFRTWGLTTTTIRNSLPDLQGTNTTSPKELANLMAIVSQGNLVSMPSRD 366

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
           +  L+I  +   +T    G   GA    KTG       +     +   +  IA ++
Sbjct: 367 L-MLDILRRTQRDTLLPSGLGTGARAFHKTGDIGTMLADTGLIVVPTGKRYIASVM 421


>gi|237800749|ref|ZP_04589210.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331023607|gb|EGI03664.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 185

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 5/151 (3%)

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           N  A ++A S       F+  MN  ++ LG+  T ++   G+      T      ++   
Sbjct: 2   NRAAASLAHSYPGGYPAFILAMNAKARALGMKHTAYVEPTGLSVFNVSTARDLTKLVMAA 61

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVAS 231
            K      +   + K +  +   Y     NT+  V          KTGFT  +G  +V  
Sbjct: 62  RKYPMISELSTTEQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLL 121

Query: 232 AIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
               ++ +  VIL A  + T    ++ +   
Sbjct: 122 TSMANRPVSVVILDAFGKYTHFADASRIRKW 152


>gi|126659507|ref|ZP_01730640.1| hypothetical protein CY0110_07269 [Cyanothece sp. CCY0110]
 gi|126619241|gb|EAZ89977.1| hypothetical protein CY0110_07269 [Cyanothece sp. CCY0110]
          Length = 422

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 75/275 (27%), Gaps = 13/275 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +     K   +  +D + G          P   AS  K+      F  + +    L   +
Sbjct: 146 AKYPNVKPQAWF-IDLDNGA-YVTYNGTQPIPAASTIKIPVLVAFFQEVDKGNMHLDQML 203

Query: 81  TISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           T++K+            ++            +I+ S N     + + +        + +N
Sbjct: 204 TMTKDVMVSGSGDMQYMQENKKFPAIEVATKMIIISDNTATEMLVKQI-----GGKEVLN 258

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
              K  G+  T   N    ++  + T++ D+A L  RI+                ++G K
Sbjct: 259 QRFKEWGMKHTEIHNILPDLEGTNKTSSEDLAKLLARIERGDLISTRSRDRLIAIMEGTK 318

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRNK 254
                            KTG       +     +   +  I  +            +  +
Sbjct: 319 TRTLLPQGLEKQANIAHKTGDIGTIIGDAGIIDMPTGKRYIGAVFAERAYNDPAGRSLIQ 378

Query: 255 VSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV 289
             +  +   F     R     + K    Q    E 
Sbjct: 379 DISRTVYQHFKYYQPRPVPKTVKKPVESQPQPEEK 413


>gi|21541783|gb|AAM61952.1|AF516719_1 beta-lactamase TEM-104 [Klebsiella pneumoniae]
 gi|298359550|gb|ADI77428.1| inhibitor-resistant beta-lactamase [Escherichia coli]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  ++ +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIVEIG 279


>gi|18652316|gb|AAL77062.1|AF468003_1 TEM-type beta lactamase [Escherichia coli]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGADERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|213133718|gb|ACJ43258.1| TEM-1 beta-lactamase [Escherichia coli]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++    +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERIRQIAEIG 279


>gi|81365640|gb|AAZ14084.2| TEM-146 [Escherichia coli]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLPDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSHGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|90110162|gb|ABD90508.1| beta-lactamase BlaTEM-1b [Escherichia coli]
          Length = 284

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +      + Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASWQQLIDWVEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|222831972|gb|EEE70449.1| predicted protein [Populus trichocarpa]
          Length = 155

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)

Query: 216 MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINY 275
           MKTG+ C+SGFN+VA+A +G+++L AV+LGA  +  R +++A LL+ GF  +        
Sbjct: 1   MKTGYICSSGFNLVATATRGERTLAAVVLGAQSQVQRAEIAADLLTRGFETQGLGAPSIV 60

Query: 276 IIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKES 318
            ++   Q  ++ +V +I  E+C+ +        +  E +   +
Sbjct: 61  DLRPSEQ--VTEDVADIRPEICSEEAVAKRMKERDDEGRLILT 101


>gi|55140586|gb|AAV41835.1| TEM-136 beta-lactamase [Pseudomonas aeruginosa]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V       +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVAALSFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLDRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|24431109|gb|AAN61404.1|AF466526_3 extended-spectrum beta-lactamase TEM-21 [Pseudomonas aeruginosa]
 gi|2970695|gb|AAC06040.1| extended spectrum beta-lactamase TEM-21 [Morganella morganii]
 gi|3282026|emb|CAA76794.1| beta-lactamase class A [Klebsiella pneumoniae]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+++M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLRNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|68137406|gb|AAY85632.1| extended spectrum beta-lactamase TEM-143 [Escherichia coli]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDCWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|70980484|emb|CAJ17558.1| TEM-derived extended spectrum beta-lactamase [Salmonella enterica
           subsp. enterica serovar Derby]
 gi|70980486|emb|CAJ17559.1| TEM-derived extended spectrum beta-lactamase [Salmonella enterica
           subsp. enterica serovar Derby]
          Length = 286

 Score = 56.9 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDCWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|119394773|gb|ABL74511.1| Gil1 [Citrobacter gillenii]
          Length = 286

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 71/268 (26%), Gaps = 14/268 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           M  F + +   + +   P  +   T                Y  LD  +G ++       
Sbjct: 1   MPHFRLALIPLLTAFCLPAFAHPTTLNKVKEAESQLTARVGYAELDLTSGEILESYRLQE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +   K  L   I  S+         +       MT+     
Sbjct: 61  RFPMMSTFKVLLCGAVLARVDAGKERLDRRIPFSRRDLVEYSPVTEKHLTDGMTVGELCD 120

Query: 110 LLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++   +    F++   +    L         A    +    T  
Sbjct: 121 AAITMSDNTAANLLLTAIGGPQGLTAFLRTTGDRVTRLDRWEPELNEALPGDKRDTTTPE 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   +           Q+    +  K       +V         KTG        
Sbjct: 181 NMAQTLRQLLTGKILTTTSQQQLTHWMVTDKVAGPLLRSVLPAGWFIADKTGAGARGSRG 240

Query: 228 IVASAIQGDQS-LIAVILGALDRNTRNK 254
           IVA+     +   I VI     + T  +
Sbjct: 241 IVAALGPDGKPSRIVVIYITESQATMAE 268


>gi|329939447|ref|ZP_08288783.1| peptidoglycan carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
 gi|329301676|gb|EGG45570.1| peptidoglycan carboxypeptidase [Streptomyces griseoaurantiacus
           M045]
          Length = 871

 Score = 56.9 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++   + P LS           ++D +TG  +     D    PAS TK+ TA    S L 
Sbjct: 488 SLAGILDPLLSDPSLGDRRGAAVVDVSTGRRLYAKDADAGLTPASTTKIATAVAALSALG 547

Query: 71  EKK 73
            + 
Sbjct: 548 PEH 550


>gi|218246445|ref|YP_002371816.1| beta-lactamase [Cyanothece sp. PCC 8801]
 gi|218166923|gb|ACK65660.1| beta-lactamase [Cyanothece sp. PCC 8801]
          Length = 425

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 75/274 (27%), Gaps = 9/274 (3%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               S     K   +  +D + G          P   AS  K+      F  L   K  L
Sbjct: 154 IATQSKYAKLKPQAWF-MDLDNGA-YVSVNGSVPVPAASTIKIPVLVAFFEALDAGKIHL 211

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
              + + K        N  +K   T          ++  +++ A  +            +
Sbjct: 212 DEILIMDKAIITSGAGNMQYKPPGTKFTALETATQMIVISDNTATDML----IRRLGGKE 267

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            +N   ++ G++ T   N    ++  + TT  D++ L  RI+      +         ++
Sbjct: 268 ALNARFRDWGMTNTVINNRLPDLEGTNTTTPEDLSKLLARIERGEVLTLRSRDRLLGIMQ 327

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
             +                 KTG   +   +     I   +  I  +         N   
Sbjct: 328 ETRTRTLLPQGLEKDAIISHKTGDIGSIIGDAGIIDIPNGKRYIGAVF---TSRPYNDPM 384

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVP 290
              L   F   T +    Y ++         + P
Sbjct: 385 GRALIQDFSRTTYQHFKWYQVRPKVNPPEPAKPP 418


>gi|15624079|gb|AAL03985.1|AF203816_1 extended-spectrum beta-lactamase TEM-71 [Klebsiella pneumoniae]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|186684664|ref|YP_001867860.1| beta-lactamase [Nostoc punctiforme PCC 73102]
 gi|186467116|gb|ACC82917.1| beta-lactamase [Nostoc punctiforme PCC 73102]
          Length = 470

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 78/247 (31%), Gaps = 16/247 (6%)

Query: 8   IAMAMLSNIFPFLSIAETNKL---PYYTL------LDTNTGHVIAENYPDHPWNPASLTK 58
           +   ++    P  ++    K     Y  L      LD +TG  + +   D  +  AS  K
Sbjct: 188 LFAGVIPMHSPMKALEPQIKALMNRYSFLKTGMFFLDLDTGDYL-DVGGDRVFPAASTIK 246

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           L      F  L   K  L   + + ++  +    +    + G   T    +  +I  S N
Sbjct: 247 LPILIAFFQDLDAGKVTLQENLIMRRDLVTNGSGTMQYERVGKKYTALETITKMITISDN 306

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                I + L       V  +N   +N GL  T   +    ++  + T+++DMA +   +
Sbjct: 307 TATNMIIDRL-----GGVTKLNQRFRNWGLKDTVIRHLLADLRGTNTTSSQDMARVLALV 361

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        +     ++         A          KTG       +     +   +
Sbjct: 362 VNNKLVSPQSREQALDILRHTTIHTLLPAGLGKGAVIANKTGDIGFLIGDAGFVTMPNGK 421

Query: 238 SLIAVIL 244
             +A I 
Sbjct: 422 RYLAAIF 428


>gi|40737712|gb|AAR89359.1| beta-lactamase TEM-128 [Escherichia coli]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M      L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGEHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|301301062|ref|ZP_07207222.1| putative D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|300851332|gb|EFK79056.1| putative D-alanyl-D-alanine carboxypeptidase DacA [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 257

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 74/187 (39%), Gaps = 13/187 (6%)

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK----KYPNTNWAVGTFL-GAD 214
              +  +A+DMAI++ ++  D+P+ ++  +++ ++   +       NTN  +       D
Sbjct: 30  NSENELSAQDMAIIATKLIKDYPEILNTTKLQNVQFNDRGKTTSVTNTNRLLSDNTFQVD 89

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS-----MGFYNKTD 269
           G+KTG + A+G  I A+  +    +I VI+GA   + R + +  LL+       +     
Sbjct: 90  GLKTGTSDAAGECITATTSKYGSRIITVIIGANSDSQRFEQTKLLLNNISNSYNYTVIGA 149

Query: 270 RKKINYIIKDFYQQNLSNEVPNISEEVCTTQ--KEIINYNTQMKEAKDKESHFIDFEKIT 327
            + I  I      +     +P   ++       KE    +   K   + E      +K  
Sbjct: 150 GQPIPNISNVKILKGKQKTLPIAMQKTTGLWLNKEQGTQDISAKFHPNSE-IIAPIKKYQ 208

Query: 328 LLKNKIT 334
            +     
Sbjct: 209 NVGKVTL 215


>gi|21541785|gb|AAM61953.1|AF516720_1 beta-lactamase TEM-105 [Escherichia coli]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCNAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|38456216|gb|AAR21068.1| beta-lactamase TEM-129 [Streptococcus pneumoniae]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAIA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|319786192|ref|YP_004145667.1| beta-lactamase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464704|gb|ADV26436.1| Beta-lactamase [Pseudoxanthomonas suwonensis 11-1]
          Length = 306

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 57/207 (27%), Gaps = 2/207 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LD  +G  +  + P+  +   S  K M +  V +        L   + + +        
Sbjct: 62  VLDAGSGRHLGGHRPEERFPMCSTFKAMLSAAVLAQADRGALSLDERLPVGEADIVSHSP 121

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++ + +          
Sbjct: 122 VTRRHVGKDVTVRDLCRATMTTSDNGAANLLLGRIGGTAGLTAFLRGIGDRVTRSDRMEP 181

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         +       L+  +  D        Q+    +      +   A    
Sbjct: 182 EMNAFAPGDPRDTTSPRAMAGSLARCVLGDVLSPASRMQLADWLVDNGTGDDCLRAGIGP 241

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQ 237
               G KTG   A   N +A A    Q
Sbjct: 242 GWRVGDKTGGDGAGTRNDIAVAWPLGQ 268


>gi|4557166|gb|AAD22538.1|AF104441_1 extended spectrum beta-lactamase TEM-53 [Klebsiella pneumoniae]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|83031783|gb|ABB97007.1| beta-lactamase TEM-55 [Escherichia coli]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAEPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|302595335|ref|YP_003829050.1| beta-lactamase class A [Escherichia coli]
 gi|302310071|gb|ADL13944.1| TEM-33 [Escherichia coli]
          Length = 286

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|60115532|ref|YP_209323.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|45758090|gb|AAS76302.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 269

 Score = 56.5 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 73/262 (27%), Gaps = 15/262 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVILGALDRN 250
           +     +   ++ +       N
Sbjct: 246 ALGPDGKPSRIVVIYTDGESGN 267


>gi|7672821|gb|AAF66653.1| class A beta-lactamase [Proteus mirabilis]
          Length = 286

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 84/277 (30%), Gaps = 14/277 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDH 49
           ++ F V +     +   P  +  ET                Y  LD N+G ++    P+ 
Sbjct: 3   IKHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEE 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V S +   +  L   I  S+N        +       MT+     
Sbjct: 63  RFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCS 122

Query: 110 LLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++   ++   F+ +M +    L         A    +    T A
Sbjct: 123 AAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPA 182

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   +  +        Q+       K       +          K+G +      
Sbjct: 183 AMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRG 242

Query: 228 IVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 243 IIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|16798370|gb|AAL29433.1|AF427127_1 inhibitor-resistant beta-lactamase TEM-81 [Escherichia coli]
          Length = 286

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       +
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAV 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|27374443|gb|AAD33116.2|AF091113_1 beta-lactamase [Proteus mirabilis]
          Length = 286

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCIPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSCGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|225698232|gb|ACO07310.1| CMT-type extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|270311272|gb|ACZ72747.1| beta-lactamase [Achromobacter denitrificans]
 gi|270311274|gb|ACZ72748.1| beta-lactamase [Elizabethkingia meningoseptica]
 gi|270311276|gb|ACZ72749.1| beta-lactamase [Chryseobacterium gleum]
          Length = 286

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLICGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|8052261|emb|CAB92324.1| TEM-68 ES-beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 56.5 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 74/256 (28%), Gaps = 15/256 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL 244
           +     +   ++ + +
Sbjct: 246 ALGPDGKPSRIVVIYM 261


>gi|6176548|gb|AAF05614.1|AF190695_1 inhibitor-resistant beta-lactamase TEM-77 [Escherichia coli]
 gi|6688989|emb|CAB65358.1| beta-lactamase IRT-18 [Proteus mirabilis]
          Length = 286

 Score = 56.1 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSSGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|161016657|emb|CAO98721.1| TEM-15 B-lactamase [Haemophilus parainfluenzae]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|121485913|gb|ABM54870.1| beta-lactamase TEM-160 [Proteus mirabilis]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|43798|emb|CAA45828.1| extended-spectrum beta-lactamase TEM-3 [Klebsiella pneumoniae]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|15149328|gb|AAK85244.1| inhibitor resistant TEM beta-lactamase [Escherichia coli]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|3282028|emb|CAA76795.1| beta-lactamase class A [Klebsiella pneumoniae]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGGSERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|6007799|gb|AAF01046.1|AF188199_1 beta-lactamase variant TEM-70 [Escherichia coli]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASQQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|105958774|gb|ABF81660.1| beta-lactamase [Cloning vector pRKW2]
 gi|218533933|gb|ACK87037.1| beta-lactamase [Cloning vector AbVec-hIgG1]
 gi|218533936|gb|ACK87039.1| beta-lactamase [Cloning vector AbVec-hIgKappa]
 gi|220062124|gb|ACL79637.1| beta lactamase [pBR322 based IG-lambda expression vector]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S     +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRDDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|2118168|pir||S60310 extended spectrum beta-lactamase CAZ-2 - Klebsiella pneumoniae
 gi|296952|emb|CAA46344.1| extended spectrum beta-lactamase CAZ-2 [Klebsiella pneumoniae]
          Length = 286

 Score = 56.1 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|53987101|gb|AAV27316.1| beta-lactamase [Cloning vector p713-909]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQSL-IAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPFRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|6176546|gb|AAF05613.1|AF190694_1 inhibitor-resistant beta-lactamase TEM-76 [Escherichia coli]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
               N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMGDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|42540511|gb|AAS19171.1| extended spectrum beta-lactamase TEM-133 [Klebsiella pneumoniae]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|170077878|ref|YP_001734516.1| beta-lactamase, putative [Synechococcus sp. PCC 7002]
 gi|169885547|gb|ACA99260.1| beta-lactamase, putative [Synechococcus sp. PCC 7002]
          Length = 387

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 65/234 (27%), Gaps = 8/234 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           +       ++   T        +D +TG  + +   D P + AS  K+      F  +  
Sbjct: 113 LAETTQAAIAADSTLDA-SLLFVDLDTGEYL-DVAGDRPLSAASTIKIPILVAFFEAVDS 170

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K  L   +T+++           +K   +          +  ++++ A  +   L    
Sbjct: 171 GKVNLDDSLTLTQEVIGGGSGGMQYKTPGSTYTALYTATEMSVNSDNTATNMITELLGGN 230

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
                                 +  G         A  +A ++             F+I 
Sbjct: 231 AVLNAKFQQWGMTQTQLNNPLPDLEGTNLTSAKDLAHLLARVNQGEILSVRSRDRLFRIM 290

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
           G     +  P          GAD + KTG   +   +     +   +  +A I 
Sbjct: 291 GDTSNDRLLP-----QSLGQGADIVHKTGDIGSIIGDAGIVDLPNGKRYVAAIF 339


>gi|2995959|gb|AAD13350.1| beta-lactamase [Expression vector pPK113]
 gi|4808836|gb|AAD29959.1| beta-lactamase [Expression vector pPK115]
 gi|5639950|gb|AAD45907.1| beta-lactamase [Cloning vector pPK124]
 gi|22774036|gb|AAN07186.1| beta-lactamase [Cloning vector pIA423]
 gi|27573252|gb|AAO20026.1| beta lactamase [Expression vector pETAT-1]
 gi|27573255|gb|AAO20028.1| beta lactamase [Expression vector pETAT-2]
 gi|27573258|gb|AAO20030.1| beta lactamase [Expression vector pNB-3]
 gi|134105580|gb|ABO60931.1| beta-lactamase [Expression vector pET21a-LIC]
 gi|145307007|gb|ABP57189.1| beta-lactamase [Expression vector pET32a-LIC]
 gi|164470782|gb|ABY58157.1| beta lactamase [Expression vector pTEV4]
 gi|164470785|gb|ABY58159.1| beta lactamase [Expression vector pTEV3]
 gi|164470788|gb|ABY58161.1| beta lactamase [Expression vector pTEV5]
 gi|164470791|gb|ABY58163.1| beta lactamase [Expression vector pKLD66]
 gi|187969496|gb|ACD44845.1| ampicillin resistance protein [Expression vector pGGWA]
 gi|187969501|gb|ACD44849.1| ampicillin resistance protein [Expression vector pHGGWA]
 gi|187969506|gb|ACD44853.1| ampicillin resistance protein [Expression vector pHGWA]
 gi|187969511|gb|ACD44857.1| ampicillin resistance protein [Expression vector pHMGWA]
 gi|187969516|gb|ACD44861.1| ampicillin resistance protein [Expression vector pHNGWA]
 gi|187969521|gb|ACD44865.1| ampicillin resistance protein [Expression vector pHXGWA]
 gi|187969526|gb|ACD44869.1| ampicillin resistance protein [Expression vector pMGWA]
 gi|187969531|gb|ACD44873.1| ampicillin resistance protein [Expression vector pNGWA]
 gi|187969536|gb|ACD44877.1| ampicillin resistance protein [Expression vector pXGWA]
 gi|187969541|gb|ACD44881.1| ampicillin resistance protein [Expression vector p0GWA]
 gi|219646791|gb|ACL30944.1| beta-lactamase [Cloning vector pJM2]
 gi|282161296|gb|ADA79630.1| ampicillin resistance protein [Escherichia coli]
 gi|310686582|gb|ADP02957.1| Bla [Cloning vector pETL7]
 gi|310686592|gb|ADP02965.1| Bla [Cloning vector pLR4]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|46370397|gb|AAS89984.1| beta-lactamase [Enterobacter aerogenes]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|2293126|gb|AAB68655.1| beta-lactamase [unidentified cloning vector]
 gi|2293129|gb|AAB68657.1| beta-lactamase [unidentified cloning vector]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 83/275 (30%), Gaps = 16/275 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A       H T    M
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAI-PNDERHTTMPVAM 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
           A    ++ T     +   Q     ++  K                  K+G        I+
Sbjct: 185 ATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGII 244

Query: 230 ASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           A+     +   I VI     + T ++ +  +  +G
Sbjct: 245 AALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|284468332|gb|ADB90239.1| beta-lactamase TEM-176 [Escherichia coli]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +V         K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSVLPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|261414308|gb|ACX83572.1| extended spectrum beta-lactamase TEM-1 [Morganella morganii]
          Length = 282

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 185 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 244

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 245 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 278


>gi|254966909|gb|ACT97477.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF1DD01_19]
          Length = 285

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|238863894|gb|ACR66223.1| beta-lactamase TEM-1 [Raoultella terrigena]
 gi|238863896|gb|ACR66224.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863898|gb|ACR66225.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863900|gb|ACR66226.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863902|gb|ACR66227.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863904|gb|ACR66228.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863906|gb|ACR66229.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863908|gb|ACR66230.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863910|gb|ACR66231.1| beta-lactamase TEM-1 [Raoultella terrigena]
 gi|238863912|gb|ACR66232.1| beta-lactamase TEM-1 [Raoultella terrigena]
 gi|238863914|gb|ACR66233.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863916|gb|ACR66234.1| beta-lactamase TEM-1 [Raoultella terrigena]
 gi|238863918|gb|ACR66235.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863920|gb|ACR66236.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863922|gb|ACR66237.1| beta-lactamase TEM-1 [Raoultella terrigena]
 gi|238863924|gb|ACR66238.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863926|gb|ACR66239.1| beta-lactamase TEM-1 [Cronobacter sakazakii]
 gi|238863928|gb|ACR66240.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863930|gb|ACR66241.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863932|gb|ACR66242.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863934|gb|ACR66243.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863936|gb|ACR66244.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863938|gb|ACR66245.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863940|gb|ACR66246.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863942|gb|ACR66247.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863944|gb|ACR66248.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863946|gb|ACR66249.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863948|gb|ACR66250.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863950|gb|ACR66251.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863952|gb|ACR66252.1| beta-lactamase TEM-1 [Klebsiella sp. 49]
 gi|238863954|gb|ACR66253.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|238863956|gb|ACR66254.1| beta-lactamase TEM-1 [Klebsiella sp. 51]
 gi|238863958|gb|ACR66255.1| beta-lactamase TEM-1 [Klebsiella sp. 52]
 gi|238863960|gb|ACR66256.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863962|gb|ACR66257.1| beta-lactamase TEM-1 [Klebsiella oxytoca]
 gi|238863964|gb|ACR66258.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863966|gb|ACR66259.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|238863968|gb|ACR66260.1| beta-lactamase TEM-1 [Escherichia coli]
          Length = 285

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 185 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 244

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 245 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 278


>gi|157676818|emb|CAJ32372.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 KTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|44194076|gb|AAS46844.1| TEM-1 beta-lactamase [Serratia marcescens]
 gi|44194080|gb|AAS46846.1| TEM-1 beta-lactamase [Serratia marcescens]
 gi|44194082|gb|AAS46847.1| TEM-1 beta-lactamase [Serratia marcescens]
 gi|44194084|gb|AAS46848.1| TEM-1 beta-lactamase [Serratia marcescens]
          Length = 281

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|44194078|gb|AAS46845.1| TEM-1 beta-lactamase [Serratia marcescens]
          Length = 282

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|34099626|gb|AAQ57123.1| beta-lactamase TEM-128 [Acinetobacter baumannii]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|15149330|gb|AAK85245.1| TEM beta-lactamase [Escherichia coli]
 gi|15149334|gb|AAK85247.1| TEM beta-lactamase [Escherichia coli]
 gi|15149336|gb|AAK85248.1| TEM beta-lactamase [Escherichia coli]
 gi|15149338|gb|AAK85249.1| TEM beta-lactamase [Escherichia coli]
 gi|15149340|gb|AAK85250.1| TEM beta-lactamase [Escherichia coli]
 gi|15149344|gb|AAK85252.1| TEM beta-lactamase [Escherichia coli]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|61967136|gb|AAX56615.1| beta-lactamase TEM-141 [Enterobacter cloacae]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVEDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|114881106|ref|YP_758647.1| Beta lactamase [Pseudomonas aeruginosa]
 gi|168998381|ref|YP_001687658.1| beta-lactamase TEM precursor [Birmingham IncP-alpha plasmid]
 gi|190014891|ref|YP_001965403.1| Beta-lactamase [Escherichia coli]
 gi|3859496|gb|AAC77431.1| beta lactamase [Pseudomonas aeruginosa]
 gi|6634546|emb|CAB64361.1| beta lactamase TEM-2 [Stenotrophomonas maltophilia]
 gi|8117211|dbj|BAA96316.1| beta lactamase [Shuttle vector pNIC6010]
 gi|8117218|dbj|BAA96322.1| beta lactamase [Shuttle vector pNIC6011]
 gi|8117225|dbj|BAA96328.1| beta lactamase [Shuttle vector pNIC6012]
 gi|21998651|emb|CAA38429.1| penicillinase TEM-2 [Pseudomonas aeruginosa]
 gi|42718127|gb|AAS38487.1| beta-lactamase [Proteus mirabilis]
 gi|53794412|gb|AAU93763.1| Bla [Integration vector pJK202]
 gi|109389612|gb|ABG29531.1| Beta-lactamase [Escherichia coli]
 gi|114703517|emb|CAK12637.1| Beta Lactamase [Pseudomonas aeruginosa]
 gi|157277486|tpe|CAJ85677.1| TPA: beta lactamase [Birmingham IncP-alpha plasmid]
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|509142|emb|CAA48214.1| beta-lactamase,human IgG3 hinge fusion [synthetic construct]
          Length = 356

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|10955180|ref|NP_052173.1| beta-lactamase [Neisseria gonorrhoeae]
 gi|18466603|ref|NP_569411.1| beta-lactamase [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|19774241|ref|NP_608310.1| TEM beta-lactamase [Klebsiella pneumoniae]
 gi|27383504|ref|NP_775035.1| BlaTEM1 [Citrobacter freundii]
 gi|38638187|ref|NP_943295.1| beta-lactamase [Escherichia coli]
 gi|41056932|ref|NP_957565.1| hypothetical protein pC15-1a_020 [Escherichia coli]
 gi|58000324|ref|YP_190222.1| beta-lactamase [Escherichia coli]
 gi|58383274|ref|YP_194844.1| beta-lactamase TEM1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|58383307|ref|YP_194879.1| beta-lactamase TEM1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|133756243|ref|YP_001096393.1| hypothetical protein pLEW517_p68 [Escherichia coli]
 gi|145639564|ref|ZP_01795168.1| beta-lactamase [Haemophilus influenzae PittII]
 gi|152973631|ref|YP_001338671.1| beta-lactamase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|152973829|ref|YP_001338868.1| putative TEM-1 beta-lactamase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|160431621|ref|YP_001551788.1| beta-lactamase TEM precursor [Salmonella enterica subsp. enterica
           serovar Dublin]
 gi|160431829|ref|YP_001551943.1| beta-lactamase TEM precursor [Salmonella enterica subsp. enterica
           serovar Choleraesuis]
 gi|161867939|ref|YP_001598120.1| Bla [Salmonella enterica subsp. enterica serovar Choleraesuis]
 gi|162960937|ref|YP_001621483.1| beta-lactamase TEM [Haemophilus influenzae 86-028NP]
 gi|169303001|ref|YP_001693174.1| beta-lactamase TEM precursor [Escherichia coli]
 gi|170650838|ref|YP_001740012.1| beta-lactamase TEM [Escherichia coli SMS-3-5]
 gi|187729587|ref|YP_001874868.1| beta-lactamase [Providencia rettgeri]
 gi|187736871|ref|YP_001816609.1| BlaTEM-1 [Escherichia coli 1520]
 gi|189009193|ref|YP_001928075.1| TEM-1 [Klebsiella pneumoniae]
 gi|190570395|ref|YP_001966385.1| BlaTEM beta-lactamase [Salmonella typhimurium]
 gi|194451020|ref|YP_002045448.1| beta-lactamase TEM [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194733784|ref|YP_002112926.1| beta-lactamase TEM [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|209901184|ref|YP_002286965.1| beta-lactamase [Klebsiella pneumoniae]
 gi|209947572|ref|YP_002291069.1| beta-lactamase TEM precursor [Haemophilus influenzae]
 gi|213155647|ref|YP_002317692.1| beta-lactamase TEM [Acinetobacter baumannii AB0057]
 gi|216967802|ref|YP_002333310.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|218548995|ref|YP_002382786.1| Beta-lactamase TEM [Escherichia fergusonii ATCC 35469]
 gi|218561671|ref|YP_002394583.1| Beta-lactamase TEM precursor (Penicillinase) [Escherichia
           fergusonii ATCC 35469]
 gi|218707900|ref|YP_002415419.1| beta-lactamase [Escherichia coli UMN026]
 gi|226807677|ref|YP_002791371.1| beta-lactamase TEM-1 [Enterobacter cloacae]
 gi|226809987|ref|YP_002791681.1| beta-lactamase TEM-1 [Enterobacter cloacae]
 gi|229847052|ref|ZP_04467158.1| beta-lactamase TEM precursor [Haemophilus influenzae 7P49H1]
 gi|256367543|ref|YP_003108102.1| beta-lactamase TEM-1 precursor [Escherichia coli]
 gi|256367643|ref|YP_003108210.1| beta-lactamase TEM-1 precursor [Escherichia coli]
 gi|260752133|ref|YP_003237648.1| TEM-1 beta-lactamase [Escherichia coli O111:H- str. 11128]
 gi|261888727|ref|YP_003264416.1| beta-lactamase tem precursor [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|284000140|ref|YP_003377827.1| beta-lactamase blaTEM1 [Escherichia coli O26:H-]
 gi|291289025|ref|YP_003517528.1| beta-lactamase [Klebsiella pneumoniae]
 gi|294496707|ref|YP_003560400.1| TEM betalactamase [Klebsiella pneumoniae]
 gi|300818450|ref|ZP_07098659.1| beta-lactamase [Escherichia coli MS 107-1]
 gi|300904914|ref|ZP_07122735.1| beta-lactamase [Escherichia coli MS 84-1]
 gi|300924647|ref|ZP_07140599.1| beta-lactamase [Escherichia coli MS 182-1]
 gi|300939490|ref|ZP_07154151.1| beta-lactamase [Escherichia coli MS 21-1]
 gi|300946710|ref|ZP_07160963.1| beta-lactamase [Escherichia coli MS 116-1]
 gi|300957338|ref|ZP_07169559.1| beta-lactamase [Escherichia coli MS 175-1]
 gi|300973645|ref|ZP_07172310.1| beta-lactamase [Escherichia coli MS 200-1]
 gi|301307411|ref|ZP_07213411.1| beta-lactamase [Escherichia coli MS 124-1]
 gi|301329877|ref|ZP_07222602.1| beta-lactamase [Escherichia coli MS 78-1]
 gi|301594945|ref|ZP_07239953.1| beta-lactamase [Acinetobacter baumannii AB059]
 gi|302595552|ref|YP_003829170.1| beta-lactamase [Escherichia coli]
 gi|302651688|ref|YP_003829069.1| beta-lactamase [Escherichia coli]
 gi|305696861|ref|YP_003864176.1| beta-lactamase tem precursor [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|310286414|ref|YP_003937675.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|317054653|ref|YP_004119720.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|317054667|ref|YP_004119734.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|324120166|ref|YP_004249865.1| TEM beta-lactamase [Klebsiella pneumoniae]
 gi|331680829|ref|ZP_08381469.1| beta-lactamase [Escherichia coli H299]
 gi|332668529|ref|YP_004455307.1| beta-lactamase [Enterobacter sp. W001]
 gi|332875070|ref|ZP_08442907.1| beta-lactamase [Acinetobacter baumannii 6014059]
 gi|50401825|sp|P62593|BLAT_ECOLX RecName: Full=Beta-lactamase TEM; AltName: Full=IRT-4; AltName:
           Full=Penicillinase; AltName: Full=TEM-1; AltName:
           Full=TEM-16/CAZ-7; AltName: Full=TEM-2; AltName:
           Full=TEM-24/CAZ-6; AltName: Full=TEM-3; AltName:
           Full=TEM-4; AltName: Full=TEM-5; AltName: Full=TEM-6;
           AltName: Full=TEM-8/CAZ-2; Flags: Precursor
 gi|50401826|sp|P62594|BLAT_SALTI RecName: Full=Beta-lactamase TEM; AltName: Full=Penicillinase;
           Flags: Precursor
 gi|4959725|gb|AAD34466.1|AF136442_2 beta-lactamase [Cloning vector pScosBC1]
 gi|6007801|gb|AAF01047.1|AF188200_1 beta-lactamase variant TEM-1D [Escherichia coli]
 gi|6010634|gb|AAF01198.1|AF179892_2 beta-lactamase [Cloning vector pLM3]
 gi|10185696|gb|AAG14408.1|AF188331_7 beta-lactamase [Shigella flexneri]
 gi|11036939|gb|AAG27428.1|AF288620_1 beta-lactamase [Cloning vector pdeltaE1sp1A(CMV-GFP)]
 gi|12056589|gb|AAG47953.1|AF308739_2 beta-lactamase [Cloning vector pLM99]
 gi|12056592|gb|AAG47955.1|AF308740_2 beta-lactamase [Cloning vector pLM100]
 gi|12056594|gb|AAG47956.1|AF308741_1 beta-lactamase [Cloning vector pLM101]
 gi|12802445|gb|AAK07886.1|AF316553_1 beta-lactamase [Cloning vector pJH370]
 gi|12802448|gb|AAK07888.1|AF316554_1 beta-lactamase [Cloning vector pJH391]
 gi|12802452|gb|AAK07891.1|AF316555_2 beta-lactamase [Cloning vector pXZ240]
 gi|14165161|gb|AAK55408.1|AF376056_3 beta-lactamase [Cloning vector pTZ110]
 gi|14487951|gb|AAK63814.1|AF383623_5 beta-lactamase [Cloning vector pREX1LC]
 gi|15294080|gb|AAK95217.1|AF403737_2 beta-lactamase [Expression and selection vector pKS336]
 gi|16798378|gb|AAL29437.1|AF427131_1 beta-lactamase TEM1D [Escherichia coli]
 gi|16798380|gb|AAL29438.1|AF427132_1 beta-lactamase TEM1E [Escherichia coli]
 gi|16798382|gb|AAL29439.1|AF427133_1 beta-lactamase TEM1F [Escherichia coli]
 gi|19698432|gb|AAL93144.1|AF479774_8 TEM beta-lactamase [Klebsiella pneumoniae]
 gi|33323513|gb|AAQ07483.1|AF503408_7 Bla [Enterobacteria phage P7]
 gi|43713|emb|CAA23886.1| beta-lactamase [Escherichia coli]
 gi|58031|emb|CAA47409.1| bla gene [synthetic construct]
 gi|58034|emb|CAA47411.1| bla gene from [synthetic construct]
 gi|207765|gb|AAA72797.1| beta-lactamase [unidentified cloning vector]
 gi|208646|gb|AAA99914.1| beta-lactamase [Cloning vector pNO3097]
 gi|208985|gb|AAA73222.1| beta-lactamase [unidentified cloning vector]
 gi|209523|gb|AAA72075.1| beta-lactamase [unidentified cloning vector]
 gi|220934|dbj|BAA00795.1| ampicillin resistance protein [Shuttle vector pHY320PLK]
 gi|220965|dbj|BAA14388.1| Ap resistance protein [synthetic construct]
 gi|408371|gb|AAA67142.1| beta-lactamase [synthetic construct]
 gi|450835|gb|AAA61618.1| beta-lactamase [Cloning vector pKSM710]
 gi|455370|gb|AAB59737.1| beta-lactamase [Cloning vector pBR322]
 gi|456553|gb|AAA73387.1| beta-lactamase [Cosmid vector pIB8]
 gi|535431|gb|AAA73461.1| beta-lactamase [Cloning vector pDO192]
 gi|535434|gb|AAA73463.1| beta-lactamase [Cloning vector pDO193]
 gi|537615|gb|AAA67261.1| ampicillin resistance [Cloning vector pCOS5]
 gi|550456|gb|AAA67264.1| beta-lactamase [Shuttle vector pSP189]
 gi|554543|gb|AAA73052.1| beta-lactamase [unidentified cloning vector]
 gi|559513|emb|CAA86303.1| Beta-Lactamase [Pichia pastoris]
 gi|595689|gb|AAA57075.1| beta-lactamase [unidentified cloning vector]
 gi|595695|gb|AAA57079.1| beta-lactamase [unidentified cloning vector]
 gi|595698|gb|AAA57081.1| beta-lactamase [unidentified cloning vector]
 gi|595701|gb|AAA57083.1| beta-lactamase [unidentified cloning vector]
 gi|595707|gb|AAA57087.1| beta-lactamase [unidentified cloning vector]
 gi|595711|gb|AAA57090.1| beta-lactamase [unidentified cloning vector]
 gi|595715|gb|AAA57093.1| beta-lactamase [unidentified cloning vector]
 gi|595719|gb|AAA57096.1| beta-lactamase [unidentified cloning vector]
 gi|595723|gb|AAA57099.1| beta-lactamase [unidentified cloning vector]
 gi|595727|gb|AAA57102.1| beta-lactamase [unidentified cloning vector]
 gi|595731|gb|AAA57105.1| beta-lactamase [unidentified cloning vector]
 gi|595735|gb|AAA57108.1| beta-lactamase [unidentified cloning vector]
 gi|595739|gb|AAA57111.1| beta-lactamase [unidentified cloning vector]
 gi|595743|gb|AAA57114.1| beta-lactamase [unidentified cloning vector]
 gi|595747|gb|AAC53597.1| beta-lactamase [unidentified cloning vector]
 gi|595750|gb|AAC53599.1| beta-lactamase [unidentified cloning vector]
 gi|595754|gb|AAC53602.1| beta-lactamase [unidentified cloning vector]
 gi|595757|gb|AAA56727.1| beta-lactamase [unidentified cloning vector]
 gi|595760|gb|AAA56729.1| beta-lactamase [unidentified cloning vector]
 gi|595773|gb|AAA56737.1| beta-lactamase [unidentified cloning vector]
 gi|671746|emb|CAA59047.1| beta-lactamase [synthetic construct]
 gi|747954|gb|AAB05650.1| beta-lactamase [Cloning vector pACpET24]
 gi|757531|emb|CAA59965.1| beta-lactamase [synthetic construct]
 gi|808935|emb|CAA23426.1| unnamed protein product [synthetic construct]
 gi|847864|gb|AAC53638.1| beta-lactamase [Cloning vector pZC320]
 gi|885958|gb|AAA70411.1| beta-lactamase [Cloning vector pCG1408]
 gi|915412|gb|AAB39922.1| beta-lactamase [Cloning vector pACT2]
 gi|975874|gb|AAB41333.1| beta-lactamase [Cloning vector pOTSf1Blu]
 gi|1000355|gb|AAA76717.1| beta-lactamase [synthetic construct]
 gi|1004350|gb|AAA77665.1| amp protein [synthetic construct]
 gi|1041779|gb|AAA79995.1| beta-lactamase [Cloning vector pCALn]
 gi|1101784|gb|AAA82948.1| beta-lactamase [Cloning vector pINIIIompA3]
 gi|1101791|gb|AAA82953.1| beta-lactamase [Cloning vector pOR262]
 gi|1117911|gb|AAC53683.1| ampicillin resistance gene [synthetic construct]
 gi|1164903|emb|CAA64064.1| beta-lactamase (pBr323 der.) [synthetic construct]
 gi|1185564|gb|AAB40298.1| beta-lactamase [Cloning vector pDG1661]
 gi|1185570|gb|AAB40303.1| beta-lactamase [Cloning vector pDG1662]
 gi|1185577|gb|AAB40309.1| beta-lactamase [Cloning vector pDG1728]
 gi|1185583|gb|AAB40314.1| beta-lactamase [Cloning vector pDG1730]
 gi|1185592|gb|AAB40322.1| beta-lactamase [Cloning vector pDG1663]
 gi|1185600|gb|AAB40329.1| beta-lactamase [Cloning vector pDG1664]
 gi|1185609|gb|AAB40337.1| beta-lactamase [Cloning vector pDG1729]
 gi|1185617|gb|AAB40344.1| beta-lactamase [Cloning vector pDG1731]
 gi|1197597|gb|AAA93353.1| beta-lactamase [synthetic construct]
 gi|1197853|gb|AAA88822.1| beta-lactamase [Cloning vector pJDC406]
 gi|1236615|gb|AAB01102.1| beta-lactamase [Cloning vector pAM120]
 gi|1381229|gb|AAB05749.1| beta-lactamase [Cloning vector cLHYGpk]
 gi|1399173|gb|AAC97980.1| beta-lactamase [Shigella flexneri]
 gi|1490534|gb|AAC53664.1| beta-lactamase [Cloning vector pBAD-GFPuv]
 gi|1515099|emb|CAA68911.1| beta-lactamase [synthetic construct]
 gi|1515103|emb|CAA68858.1| beta-lactamase [synthetic construct]
 gi|1628644|gb|AAC25435.1| Bla [synthetic construct]
 gi|1633039|gb|AAB17398.1| beta-lactamase [Cloning vector pCALc]
 gi|1633042|gb|AAB17400.1| beta-lactamase [Cloning vector pCALkc]
 gi|1684864|gb|AAB36548.1| beta lactamase [Cloning vector pRNA8]
 gi|1699062|gb|AAB37347.1| beta-lactamase [Cloning vector pGEX-6P-1]
 gi|1699066|gb|AAB37350.1| beta-lactamase [Cloning vector pGEX-6P-2]
 gi|1699070|gb|AAB37353.1| beta-lactamase [Cloning vector pGEX-6P-3]
 gi|1777423|gb|AAB40517.1| beta-lactamase [Neisseria gonorrhoeae]
 gi|1935051|gb|AAB51769.1| beta-lactamase [synthetic construct]
 gi|2190700|gb|AAB64386.1| beta-lactamase [unidentified cloning vector]
 gi|2257573|dbj|BAA21464.1| beta-lactamase [Cloning vector pMW118]
 gi|2257576|dbj|BAA21466.1| beta-lactamase [Cloning vector pMW119]
 gi|2258140|emb|CAA68966.1| beta-lactamase [Plasmid pPV]
 gi|2293120|gb|AAB68651.1| beta-lactamase [unidentified cloning vector]
 gi|2501756|gb|AAC48875.1| beta-lactamase [Cloning vector pAL-Z]
 gi|2501804|gb|AAC53717.1| beta-lactamase [Cloning vector pAL-F]
 gi|2815580|gb|AAB97881.1| beta-lactamase [plasmid pETHIS-1]
 gi|2909369|emb|CAA11557.1| beta lactamase [synthetic construct]
 gi|3002497|gb|AAC08716.1| beta-lactamase [Expression vector pGH/F2.2-163]
 gi|3002502|gb|AAC08720.1| beta-lactamase [Expression vector pGH/F2.79-242]
 gi|3002506|gb|AAC08723.1| beta-lactamase [Expression vector pGH/F2.159-327]
 gi|3002510|gb|AAC08726.1| beta-lactamase [Expression vector pGH/F2.2-242]
 gi|3002514|gb|AAC08729.1| beta-lactamase [Expression vector pGH/F2.79-327]
 gi|3002518|gb|AAC08732.1| beta-lactamase [Expression vector pGH/F2.2-327]
 gi|3328367|gb|AAC26830.1| beta-lactamase [Cloning vector pWEB]
 gi|3907624|gb|AAC79082.1| beta lactamase [Transposon delivery vector pUTkm1]
 gi|3983118|gb|AAC83810.1| beta-lactamase [Expression vector pGST-parallel1]
 gi|4416097|gb|AAD20229.1| beta lactamase [Cloning vector pLXRN]
 gi|4838521|gb|AAD31023.1| beta-lactamase [Cloning vector pFB]
 gi|4838523|gb|AAD31024.1| beta-lactamase [Cloning vector pFBneo]
 gi|4884733|gb|AAD31793.1| beta-lactamase precursor [Neisseria meningitidis]
 gi|5640093|emb|CAB51570.1| beta lactamase [Expression vector pIVET]
 gi|6318570|gb|AAF06953.1| beta-lactamase [Cloning vector YEP46]
 gi|7415880|dbj|BAA93577.1| beta-lactamase [Cloning vector pGFPTA]
 gi|8164199|gb|AAF73968.1| beta-lactamase [Cloning vector pXPG]
 gi|8250021|emb|CAB93485.1| penicillin beta-lactamase [Cloning vector pBRINT-TsCm]
 gi|8250031|emb|CAB93490.1| penicillin beta-lactamase [Cloning vector pBRINT-TsGm]
 gi|8250037|emb|CAB93495.1| penicillin beta-lactamase [Cloning vector pBRINT-TsKm]
 gi|9438225|gb|AAF86568.1| beta-lactamase [Cloning vector pZR80]
 gi|9836697|gb|AAG00264.1| beta-lactamase [synthetic construct]
 gi|9836700|gb|AAG00266.1| beta-lactamase [synthetic construct]
 gi|9836703|gb|AAG00268.1| beta-lactamase [synthetic construct]
 gi|9931484|gb|AAG02190.1| beta-lactamase [Cloning vector pFB-ERV]
 gi|11061049|emb|CAC14439.1| penicillin beta-lactamase [Cloning vector pBRINTs-Cat2]
 gi|11061058|emb|CAC14444.1| penicillin beta-lactamase [Cloning vector pBRINTs-Gen4]
 gi|11061067|emb|CAC14449.1| penicillin beta-lactamase [Cloning vector pBRINTs-Kan2]
 gi|11120588|gb|AAG30933.1| beta lactamase [Cloning vector pCFB]
 gi|11545511|gb|AAG37882.1| ampicillin resistance [Tn10 delivery vector pHV1248]
 gi|11545517|gb|AAG37887.1| ampicillin resistance [Tn10 delivery vector pHV1249]
 gi|12044260|gb|AAG47772.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|16505919|emb|CAD09800.1| beta-lactamase [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|16902303|dbj|BAB71951.1| beta-lactamase TEM-1 [Serratia marcescens]
 gi|18140175|gb|AAL59006.1| beta-lactamase [Expression vector pFHC2102]
 gi|21998668|emb|CAA38428.1| penicillinase TEM-1 [Pseudomonas aeruginosa]
 gi|21998670|emb|CAA38430.1| penicillinase TEM-1 [Pseudomonas aeruginosa]
 gi|25006370|dbj|BAC23912.1| beta-lactamase [Cloning vector pHSG415s]
 gi|25006375|dbj|BAC23916.1| beta-lactamase [Cloning vector pHSG415r]
 gi|27261357|gb|AAN87698.1| BlaTEM1 [Citrobacter freundii]
 gi|27573261|gb|AAO20032.1| beta lactamase [Expression vector pETAT-11]
 gi|27573264|gb|AAO20034.1| beta lactamase [Expression vector pETAT-12]
 gi|27573267|gb|AAO20036.1| beta lactamase [Expression vector pNB-13]
 gi|28971915|dbj|BAC65352.1| beta-lactamase [Cloning vector RCAS-L14]
 gi|29568869|gb|AAO84025.1| beta-lactamase [Expression vector pPYPX88]
 gi|29568882|gb|AAO84034.1| beta-lactamase [Expression vector pPYPX99]
 gi|30230644|gb|AAP20891.1| beta-lactamase TEM-1 [Acinetobacter baumannii]
 gi|30424542|gb|AAO24784.1| ampicillin resistance determinant [Shuttle vector pSK5630]
 gi|30424547|gb|AAO24779.1| ampicillin resistance determinant [Shuttle vector pSK5645]
 gi|30424558|gb|AAO24792.1| ampicillin resistance determinant [Shuttle vector pSK5640]
 gi|31075617|gb|AAP42291.1| beta-lactamase [Cloning vector pHRS-9]
 gi|31096324|gb|AAP43782.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|31339115|dbj|BAC77165.1| beta lactamase [Salmonella enterica subsp. enterica serovar
           Enteritidis]
 gi|33303462|gb|AAQ02307.1| beta-lactamase TEM-1 [Zymomonas mobilis subsp. mobilis CP4]
 gi|34014594|dbj|BAC81970.1| beta-lactamase TEM-1 [Serratia marcescens]
 gi|34398332|gb|AAQ67239.1| Bla [Transposon delivery vector pUT-miniTn5-gfp-tet]
 gi|34495353|gb|AAQ73497.1| TEM-1 beta-lactamase [Enterobacter cloacae]
 gi|37576798|gb|AAQ94057.1| beta-lactamase TEM-1 [Streptococcus pneumoniae]
 gi|37674498|gb|AAQ96920.1| beta-lactamase TEM-1H [Klebsiella pneumoniae]
 gi|37778075|gb|AAR02595.1| beta lactamase [Expression vector pKM260]
 gi|37778077|gb|AAR02596.1| beta lactamase [Expression vector pKM263]
 gi|37778079|gb|AAR02597.1| beta lactamase [Expression vector pKM263-1xHMK]
 gi|37778081|gb|AAR02598.1| beta lactamase [Expression vector pKM263-2xHMK]
 gi|37778083|gb|AAR02599.1| beta lactamase [Expression vector pKM264]
 gi|37778085|gb|AAR02600.1| beta lactamase [Expression vector pKM265]
 gi|37930012|gb|AAP74493.1| Bla [Cloning vector pLZ41]
 gi|37962753|gb|AAR05700.1| beta-lactamase TEM1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|37962786|gb|AAR05733.1| beta-lactamase TEM1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|37983285|gb|AAR06285.1| beta-lactamase [Escherichia coli]
 gi|38044079|dbj|BAD00176.1| beta-lactamase [Cloning vector pGETS109]
 gi|38606069|gb|AAR25033.1| TEM-1 [Escherichia coli]
 gi|40795478|gb|AAR91458.1| BlaTEM-1b beta-lactamase [Klebsiella pneumoniae]
 gi|42557816|emb|CAD27777.1| ampicillin resistance protein [Cloning vector pTarg1]
 gi|45386992|gb|AAS60101.1| ampicillin resistance protein [Cloning vector pSUP202]
 gi|45558548|gb|AAS68104.1| beta-lactamase TEM-1 [Acinetobacter baumannii]
 gi|48995598|gb|AAT48415.1| ampicillin resistance protein [Cloning vector pSRalphahygro]
 gi|48995601|gb|AAT48417.1| ampicillin resistance protein [Cloning vector pSRalphaneo]
 gi|48995604|gb|AAT48419.1| ampicillin resistance protein [Cloning vector pSRalphablast]
 gi|48995607|gb|AAT48421.1| ampicillin resistance protein [Cloning vector pSRalphapuro]
 gi|48995611|gb|AAT48424.1| ampicillin resistance protein [Cloning vector pSRalphablastC]
 gi|48995615|gb|AAT48427.1| ampicillin resistance protein [Cloning vector pSRalphapuroG]
 gi|48995619|gb|AAT48430.1| ampicillin resistance protein [Cloning vector pSRalphaneoR]
 gi|48995623|gb|AAT48433.1| ampicillin resistance protein [Cloning vector pSRalphahygroY]
 gi|49036569|gb|AAT48881.1| beta-lactamase [Integration vector pDG3661]
 gi|51507314|emb|CAF29065.1| beta-lactamase TEM precursor [Haemophilus influenzae]
 gi|51556863|gb|AAU06201.1| beta-lactamase [Shuttle cosmid vector pHZ1358]
 gi|52699669|gb|AAU86938.1| beta-lactamase TEM-1 [Proteus mirabilis]
 gi|55666552|dbj|BAD69593.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|57903225|gb|AAW58855.1| beta-lactamase [Escherichia coli]
 gi|58200711|gb|AAW66605.1| beta-lactamase TEM-1b [Proteus mirabilis]
 gi|58257619|dbj|BAD88773.1| TEM-1 beta lactamase [Shigella flexneri]
 gi|62550829|emb|CAH64752.1| beta-lactamase [uncultured bacterium]
 gi|63259113|gb|AAY40261.1| Amp [Cloning vector pHR307a]
 gi|66270757|gb|AAY43692.1| Amp5 [Cloning vector pSJS1472]
 gi|66932797|gb|AAY58236.1| beta-lactamase TEM-1b [Escherichia coli]
 gi|69061783|gb|AAY99785.1| AmpR [Insertion vector pWSMK-T]
 gi|71361201|dbj|BAE16359.1| TEM-1 beta-lactamase [Escherichia coli O157:H7]
 gi|73476611|gb|AAZ76377.1| Bla [Cloning vector pSCR001]
 gi|76786452|gb|ABA54979.1| TEM-1 [Pseudomonas putida]
 gi|77455482|gb|ABA86550.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|77455484|gb|ABA86551.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|77455486|gb|ABA86552.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|77455488|gb|ABA86553.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|77455490|gb|ABA86554.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|83286862|gb|ABC02197.1| beta-lactamase [Gene replacement vector pLAW344]
 gi|84660251|emb|CAJ56071.1| beta-lactamase [Transconjugation vector pROCKB2]
 gi|84660256|emb|CAJ56075.1| beta-lactamase [Transconjugation vector pROKB1]
 gi|84782112|gb|ABC61527.1| Bla [YFV replicon vector capsid-def]
 gi|84782114|gb|ABC61528.1| Bla [YFV replicon vector FMDV-2A-def]
 gi|84782116|gb|ABC61529.1| Bla [YFV replicon vector prME-def]
 gi|86278331|gb|ABC88416.1| ampicillin resistance marker [Delivery vector pDGIEF]
 gi|91199927|emb|CAJ84437.1| beta-lactamase [Cloning vector pIV10]
 gi|91983324|gb|ABE68729.1| Bla [Integrative promoter probe vector pPP1]
 gi|91983330|gb|ABE68734.1| Bla [Integrative translation probe vector pTP1]
 gi|92429687|gb|ABE77215.1| beta-lactamase [Tn7 delivery vector pGRG36]
 gi|109627376|emb|CAJ84114.1| beta lactamase [Salmonella enterica subsp. enterica serovar
           Infantis]
 gi|110084078|gb|ABG49232.1| hypothetical protein [Escherichia coli]
 gi|110348059|gb|ABG72753.1| Bla [Expression vector mce1]
 gi|112785112|gb|ABI20746.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|112785114|gb|ABI20747.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|112785116|gb|ABI20748.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
 gi|112785118|gb|ABI20749.1| TEM extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|114107214|gb|ABI50223.1| beta lactamase TEM-1 [Klebsiella pneumoniae]
 gi|115336278|gb|ABI94361.1| beta-lactamase [Cloning vector pGT2]
 gi|115394180|gb|ABI97038.1| BlaTEM beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|116266308|gb|ABJ91392.1| beta lactamase [Cloning vector pGATA]
 gi|117572166|gb|ABK40466.1| beta-lactamase [Cloning vector EXP4(+)]
 gi|117572169|gb|ABK40468.1| beta-lactamase [Cloning vector EXP5(+)]
 gi|117572172|gb|ABK40470.1| beta-lactamase [Cloning vector pDV-NYFP]
 gi|117572175|gb|ABK40472.1| beta-lactamase [Cloning vector pDV-NTAP]
 gi|117572178|gb|ABK40474.1| beta-lactamase [Cloning vector pDV-CGFP]
 gi|117572181|gb|ABK40476.1| beta-lactamase [Cloning vector pDV-CYFP]
 gi|117572184|gb|ABK40478.1| beta-lactamase [Cloning vector pDV-CTAP]
 gi|117572187|gb|ABK40480.1| beta-lactamase [Cloning vector pDV-NTAP-NYFP]
 gi|117572190|gb|ABK40482.1| beta-lactamase [Cloning vector pDV-NYFP-CTAP]
 gi|117572193|gb|ABK40484.1| beta-lactamase [Cloning vector pDV-CGFP-CTAP]
 gi|117572196|gb|ABK40486.1| beta-lactamase [Cloning vector pDV-CYFP-CTAP]
 gi|117572199|gb|ABK40488.1| beta-lactamase [Cloning vector pDV-NTAP-CGFP]
 gi|117572202|gb|ABK40490.1| beta-lactamase [Cloning vector pDV-NTAP-CYFP]
 gi|117979211|gb|ABK59950.1| Bla [Integrative promoter probe vector pPP2]
 gi|117979217|gb|ABK59955.1| Bla [Integrative promoter probe vector pTP2]
 gi|118123363|dbj|BAF36945.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|118135667|gb|ABK62680.1| beta-lactamase [ORF expression vector pSOX]
 gi|118135670|gb|ABK62682.1| beta-lactamase [ORF selection and expression vector pSOS-X]
 gi|118603543|gb|ABL09148.1| beta-lactamase TEM-1 [Shigella flexneri]
 gi|124053925|gb|ABM89169.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053927|gb|ABM89170.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053929|gb|ABM89171.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053931|gb|ABM89172.1| TEM beta lactamase [Klebsiella oxytoca]
 gi|124053933|gb|ABM89173.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053935|gb|ABM89174.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053937|gb|ABM89175.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053939|gb|ABM89176.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053941|gb|ABM89177.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053943|gb|ABM89178.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053945|gb|ABM89179.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053947|gb|ABM89180.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053949|gb|ABM89181.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053951|gb|ABM89182.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|124053953|gb|ABM89183.1| TEM beta lactamase [Escherichia coli]
 gi|124053955|gb|ABM89184.1| TEM beta lactamase [Escherichia coli]
 gi|124053957|gb|ABM89185.1| TEM beta lactamase [Escherichia coli]
 gi|124053959|gb|ABM89186.1| TEM beta lactamase [Escherichia coli]
 gi|124053961|gb|ABM89187.1| TEM beta lactamase [Escherichia coli]
 gi|124053963|gb|ABM89188.1| TEM beta lactamase [Escherichia coli]
 gi|124053965|gb|ABM89189.1| TEM beta lactamase [Escherichia coli]
 gi|124053967|gb|ABM89190.1| TEM beta lactamase [Escherichia coli]
 gi|124053969|gb|ABM89191.1| TEM beta lactamase [Escherichia coli]
 gi|124053971|gb|ABM89192.1| TEM beta lactamase [Acinetobacter sp. AC35]
 gi|124053973|gb|ABM89193.1| TEM beta lactamase [Acinetobacter sp. AC18]
 gi|124053975|gb|ABM89194.1| TEM beta lactamase [Acinetobacter sp. AC28]
 gi|124053977|gb|ABM89195.1| TEM beta lactamase [Acinetobacter sp. AC17]
 gi|124053979|gb|ABM89196.1| TEM beta lactamase [Acinetobacter sp. AC78]
 gi|124053981|gb|ABM89197.1| TEM beta lactamase [Acinetobacter sp. AC25]
 gi|124053983|gb|ABM89198.1| TEM beta lactamase [Acinetobacter sp. AC149]
 gi|124053985|gb|ABM89199.1| TEM beta lactamase [Acinetobacter sp. AC23]
 gi|124053987|gb|ABM89200.1| TEM beta lactamase [Proteus sp. PR425]
 gi|124053989|gb|ABM89201.1| TEM beta lactamase [Citrobacter sp. CI925]
 gi|124053991|gb|ABM89202.1| TEM beta lactamase [Citrobacter sp. CI920]
 gi|124053993|gb|ABM89203.1| TEM beta lactamase [Citrobacter sp. CI888]
 gi|124053995|gb|ABM89204.1| TEM beta lactamase [Citrobacter sp. CI174]
 gi|124053997|gb|ABM89205.1| TEM beta lactamase [Citrobacter sp. CI157]
 gi|124053999|gb|ABM89206.1| TEM beta lactamase [Enterobacter sp. EN723]
 gi|124054001|gb|ABM89207.1| TEM beta lactamase [Enterobacter sp. EN959]
 gi|124054003|gb|ABM89208.1| TEM beta lactamase [Enterobacter sp. EN690]
 gi|124054005|gb|ABM89209.1| TEM beta lactamase [Enterobacter sp. EN843]
 gi|124054007|gb|ABM89210.1| TEM beta lactamase [Enterobacter sp. EN893]
 gi|124054009|gb|ABM89211.1| TEM beta lactamase [Enterobacter sp. EN989]
 gi|124054011|gb|ABM89212.1| TEM beta lactamase [Enterobacter sp. EN263]
 gi|124054013|gb|ABM89213.1| TEM beta lactamase [Enterobacter sp. EN702]
 gi|124054015|gb|ABM89214.1| TEM beta lactamase [Enterobacter sp. EN719]
 gi|124054017|gb|ABM89215.1| TEM beta lactamase [Enterobacter sp. EN712]
 gi|124054019|gb|ABM89216.1| TEM beta lactamase [Enterobacter sp. EN232]
 gi|124054021|gb|ABM89217.1| TEM beta lactamase [Enterobacter sp. EN265]
 gi|124054023|gb|ABM89218.1| TEM beta lactamase [Enterobacter sp. EN222]
 gi|124054025|gb|ABM89219.1| TEM beta lactamase [Enterobacter sp. EN729]
 gi|124054027|gb|ABM89220.1| TEM beta lactamase [Enterobacter sp. EN219]
 gi|124054029|gb|ABM89221.1| TEM beta lactamase [Enterobacter sp. EN715]
 gi|124054031|gb|ABM89222.1| TEM beta lactamase [Escherichia coli]
 gi|124054033|gb|ABM89223.1| TEM beta lactamase [Escherichia coli]
 gi|125743015|gb|ABN54712.1| TEM-1b beta-lactamase [Escherichia coli]
 gi|129278841|gb|ABO28847.1| beta-lactamase [Cloning vector pD-GEX1]
 gi|134105576|gb|ABO60928.1| beta-lactamase [Expression vector p15TV-L]
 gi|134105584|gb|ABO60934.1| beta-lactamase [Expression vector pET15-MHL]
 gi|145271355|gb|EDK11268.1| beta-lactamase [Haemophilus influenzae PittII]
 gi|145307015|gb|ABP57195.1| beta-lactamase [Expression vector pCW-LIC]
 gi|145848974|emb|CAM91526.1| tem-1 (tem extended-spectrum beta-lactamase) [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|147724723|gb|ABQ45973.1| beta lactamase [Expression vector pEamTA]
 gi|148524820|dbj|BAF63418.1| beta-lactamase [Escherichia coli]
 gi|150958413|gb|ABR80441.1| beta-lactamase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150958611|gb|ABR80638.1| putative TEM-1 beta-lactamase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|156617159|gb|ABU87507.1| beta-lactamase TEM precursor [Haemophilus influenzae 86-028NP]
 gi|157841130|gb|ABV83132.1| beta-lactamase [Cloning vector pGT3]
 gi|158348095|gb|ABW37352.1| ampicillin resistance [Cloning vector pEZY202]
 gi|159032442|gb|ABW87618.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|159885370|dbj|BAF92974.1| beta-lactamase TEM precursor [Salmonella enterica subsp. enterica
           serovar Choleraesuis]
 gi|159885490|dbj|BAF93093.1| beta-lactamase TEM precursor [Salmonella enterica subsp. enterica
           serovar Dublin]
 gi|161087318|gb|ABX56788.1| Bla [Salmonella enterica subsp. enterica serovar Choleraesuis]
 gi|162423736|gb|ABX89601.1| AmpR [Cloning vector pFOSAMP]
 gi|164511932|emb|CAO98722.1| TEM-1 B-lactamase [Haemophilus parainfluenzae]
 gi|167613951|gb|ABZ89574.1| beta-lactamase TEM precursor [Escherichia coli]
 gi|167966282|gb|ACA13193.1| beta-lactamase [Psychrobacter maritimus]
 gi|167966284|gb|ACA13194.1| beta-lactamase [Psychrobacter pulmonis]
 gi|169656090|gb|ACA62821.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|170522114|gb|ACB20291.1| beta-lactamase TEM [Escherichia coli SMS-3-5]
 gi|171850734|gb|ACB55473.1| TEM-1 [Klebsiella pneumoniae]
 gi|172051453|emb|CAP07795.1| BlaTEM-1 [Escherichia coli]
 gi|183229405|gb|ACC60255.1| beta-lactamase TEM-1 [Haemophilus influenzae]
 gi|186703055|gb|ACC91766.1| ampicillin resistance protein [Cloning vector pWSTK6]
 gi|186928931|emb|CAQ48345.1| beta-lactamase [Providencia rettgeri]
 gi|192822659|gb|ACF06168.1| beta-lactamase TEM-1b [Klebsiella pneumoniae]
 gi|194409324|gb|ACF69543.1| beta-lactamase TEM [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194709286|gb|ACF88509.1| beta-lactamase TEM [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195954368|gb|ACG58891.1| extended spectrum beta lactamase TEM-1 [Escherichia coli]
 gi|195954370|gb|ACG58892.1| extended spectrum beta lactamase TEM-1 [Klebsiella pneumoniae]
 gi|195954372|gb|ACG58893.1| extended spectrum beta lactamase TEM-1 [Enterobacter sp. O050230]
 gi|195972452|gb|ACG61355.1| beta-lactamase class A [Expression vector pDGICZ]
 gi|198286397|gb|ACH85856.1| TEM-1 [Salmonella enterica subsp. enterica serovar Kentucky]
 gi|198448569|gb|ACH88505.1| beta-lactamase TEM-1 [Helicobacter pylori]
 gi|199600431|emb|CAR66073.1| beta-lactamase [Cloning vector pr8a]
 gi|206601285|gb|ACI16364.1| beta-lactamase [Enterobacter aerogenes]
 gi|208969612|gb|ACI32075.1| beta-lactamase [Escherichia coli]
 gi|209574135|gb|ACI63023.1| beta-lactamase [Klebsiella pneumoniae]
 gi|213054807|gb|ACJ39709.1| beta-lactamase TEM [Acinetobacter baumannii AB0057]
 gi|213133674|gb|ACJ43236.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133676|gb|ACJ43237.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133678|gb|ACJ43238.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133680|gb|ACJ43239.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133682|gb|ACJ43240.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133684|gb|ACJ43241.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133686|gb|ACJ43242.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133688|gb|ACJ43243.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133690|gb|ACJ43244.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133692|gb|ACJ43245.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133694|gb|ACJ43246.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133696|gb|ACJ43247.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133698|gb|ACJ43248.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133700|gb|ACJ43249.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133702|gb|ACJ43250.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133704|gb|ACJ43251.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133706|gb|ACJ43252.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133708|gb|ACJ43253.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133720|gb|ACJ43259.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213133722|gb|ACJ43260.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|213493243|gb|ACJ47798.1| TEM-1 [Klebsiella pneumoniae]
 gi|215397974|gb|ACJ65251.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|217427695|gb|ACK44542.1| BlaTEM-1b beta lactamase [Salmonella enterica subsp. enterica
           serovar Kentucky]
 gi|218350185|emb|CAQ86948.1| Beta-lactamase TEM precursor (Penicillinase) [Escherichia
           fergusonii]
 gi|218356536|emb|CAQ89159.1| Beta-lactamase TEM precursor (penicillinase) [Escherichia
           fergusonii ATCC 35469]
 gi|218434997|emb|CAR15942.1| Beta-lactamase TEM precursor (penicillinase) [Escherichia coli
           UMN026]
 gi|218744617|dbj|BAH03496.1| beta-lactamase [Cloning vector pKS145]
 gi|219563188|gb|ACL27954.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|220898278|gb|ACL81499.1| beta-lactamase TEM-1 [Escherichia coli]
 gi|220898283|gb|ACL81503.1| beta-lactamase [Escherichia coli]
 gi|220901861|gb|ACL82963.1| TEM beta lactamase [Klebsiella pneumoniae]
 gi|224579163|gb|ACN58168.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|224979338|gb|ACN72590.1| beta-lactamase TEM-1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|225697597|gb|ACO07071.1| beta-lactamase [Klebsiella pneumoniae]
 gi|225697599|gb|ACO07072.1| beta-lactamase [Klebsiella pneumoniae]
 gi|225697601|gb|ACO07073.1| beta-lactamase [Klebsiella pneumoniae]
 gi|226425902|gb|ACO53995.1| beta-lactamase TEM-1 [Enterobacter cloacae]
 gi|226426213|gb|ACO54305.1| beta-lactamase TEM-1 [Enterobacter cloacae]
 gi|227430094|emb|CAX51342.1| TEM-1 [Salmonella enterica subsp. enterica]
 gi|228480580|gb|ACQ41908.1| beta-lactamase TEM-1 precursor [Escherichia coli]
 gi|228480798|gb|ACQ42124.1| beta-lactamase TEM-1 precursor [Escherichia coli]
 gi|229810136|gb|EEP45856.1| beta-lactamase TEM precursor [Haemophilus influenzae 7P49H1]
 gi|237871520|gb|ACR26205.1| Amp [Delivery vector PDGREF]
 gi|241732795|gb|ACS68182.1| beta-lactamase [Expression vector pBJS001]
 gi|254595912|gb|ACT75271.1| beta-lactamase TEM-1 [Acinetobacter baumannii]
 gi|254674505|dbj|BAH86060.1| beta-lactamase [Cloning vector pYT923hyg]
 gi|254966768|gb|ACT97385.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF1DD01_01]
 gi|254966775|gb|ACT97390.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF1DD01_04]
 gi|254966791|gb|ACT97401.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_07]
 gi|254966794|gb|ACT97403.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_08]
 gi|254966798|gb|ACT97405.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_10]
 gi|254966806|gb|ACT97410.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_13]
 gi|254966816|gb|ACT97417.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_16]
 gi|254966829|gb|ACT97426.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_22]
 gi|254966852|gb|ACT97441.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_47]
 gi|254966856|gb|ACT97444.1| TEM-1b beta-lactamase [mixed culture bacterium AX_gF3SD01_48]
 gi|254966895|gb|ACT97469.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF1DD01_02]
 gi|254966899|gb|ACT97471.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF1DD01_07]
 gi|254966901|gb|ACT97472.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF1DD01_13]
 gi|254966911|gb|ACT97478.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF2-3DD01_02]
 gi|254966934|gb|ACT97493.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF3SD01_17]
 gi|254966937|gb|ACT97495.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF3SD01_18]
 gi|254966939|gb|ACT97496.1| TEM-1b beta-lactamase [mixed culture bacterium CA_gF3SD01_20]
 gi|254967177|gb|ACT97639.1| TEM-1b beta-lactamase [mixed culture bacterium PE_gF2-3DD01_03]
 gi|254967179|gb|ACT97640.1| TEM-1b beta-lactamase [mixed culture bacterium PE_gF3SD01_02]
 gi|254967190|gb|ACT97647.1| TEM-1b beta-lactamase [mixed culture bacterium PE_gF3SD01_08]
 gi|254967209|gb|ACT97659.1| TEM-1b beta-lactamase [mixed culture bacterium PI_gF3SD01_05]
 gi|254967218|gb|ACT97665.1| TEM-1b beta-lactamase [mixed culture bacterium PI_gF3SD01_19]
 gi|254967220|gb|ACT97666.1| TEM-1b beta-lactamase [mixed culture bacterium PI_gF3SD01_20]
 gi|254967222|gb|ACT97667.1| TEM-1b beta-lactamase [mixed culture bacterium PI_gF3SD01_21]
 gi|255928724|gb|ACU42196.1| AmpR [Insertion vector pUTTnsKm]
 gi|255928729|gb|ACU42200.1| AmpR [Insertion vector pUTTnsCm]
 gi|255928734|gb|ACU42204.1| AmpR [Insertion vector pUTTnsTet]
 gi|256274856|gb|ACU68557.1| beta-lacatamase TEM-1 [Enterobacter cloacae]
 gi|256532072|gb|ACU81180.1| beta-lactamase [Escherichia coli]
 gi|257359587|gb|ACV53161.1| beta lactamase [Expression Vector pETBA]
 gi|257767603|dbj|BAI39097.1| TEM-1 beta-lactamase [Escherichia coli O111:H- str. 11128]
 gi|261857315|emb|CBA11387.1| beta-lactamase tem precursor (ec 3.5.2.6) (tem-1) (tem-2) (tem-3)
           (tem-4) (tem-5) (tem-6) (tem-8/caz-2) (tem-16/caz-7)
           (tem-24/caz-6) (irt-4) (penicillinase) [Salmonella
           enterica subsp. enterica serovar Typhimurium]
 gi|283445080|gb|ADB20424.1| beta-lactamase blaTEM1 [Escherichia coli O26:H-]
 gi|283484059|gb|ADB23349.1| TEM-1, beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|284433182|gb|ADB84921.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|284433237|gb|ADB84976.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|284822044|gb|ADB98019.1| Bla [Donor vector pTKIP-neo]
 gi|284822048|gb|ADB98022.1| Bla [Donor vector pTKIP-cat]
 gi|284822052|gb|ADB98025.1| Bla [Donor vector pTKIP-hygro]
 gi|284822056|gb|ADB98028.1| Bla [Donor vector pTKIP-tri]
 gi|285016601|gb|ADC33150.1| ampicillin resistance protein [Escherichia coli]
 gi|290792156|gb|ADD63482.1| beta-lactamase [Klebsiella pneumoniae]
 gi|290964839|emb|CBH41107.1| TEM-1b [Kluyvera georgiana]
 gi|293339416|gb|ADE43970.1| TEM betalactamase [Klebsiella pneumoniae]
 gi|297185518|gb|ADI24150.1| beta-lactamase TEM-1 [Acinetobacter baumannii]
 gi|298501372|gb|ADI82846.1| beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|298501374|gb|ADI82847.1| beta-lactamase TEM-1 [Enterobacter cloacae]
 gi|300309062|gb|EFJ63582.1| beta-lactamase [Escherichia coli MS 200-1]
 gi|300315908|gb|EFJ65692.1| beta-lactamase [Escherichia coli MS 175-1]
 gi|300403173|gb|EFJ86711.1| beta-lactamase [Escherichia coli MS 84-1]
 gi|300419164|gb|EFK02475.1| beta-lactamase [Escherichia coli MS 182-1]
 gi|300453627|gb|EFK17247.1| beta-lactamase [Escherichia coli MS 116-1]
 gi|300455628|gb|EFK19121.1| beta-lactamase [Escherichia coli MS 21-1]
 gi|300510896|gb|ADK25063.1| OKP beta-lactamase [Serratia marcescens]
 gi|300528854|gb|EFK49916.1| beta-lactamase [Escherichia coli MS 107-1]
 gi|300810987|gb|ADK35768.1| BlaTEM1b beta-lactamase [Klebsiella pneumoniae]
 gi|300837412|gb|EFK65172.1| beta-lactamase [Escherichia coli MS 124-1]
 gi|300844064|gb|EFK71824.1| beta-lactamase [Escherichia coli MS 78-1]
 gi|301168718|emb|CBW28309.1| beta-lactamase tem precursor (ec 3.5.2.6) (penicillinase)
           [Haemophilus influenzae 10810]
 gi|302029399|gb|ADK91430.1| TEM-1 beta-lactamase [Neisseria gonorrhoeae]
 gi|302127789|emb|CBO78202.1| beta-lactamase TEM-1 [Salmonella enterica subsp. enterica serovar
           Enteritidis]
 gi|302310091|gb|ADL13963.1| TEM-1 [Escherichia coli]
 gi|302310193|gb|ADL14064.1| TEM-1 [Escherichia coli]
 gi|302487918|gb|ADL40232.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|302487926|gb|ADL40237.1| TEM-1 [Escherichia coli]
 gi|304376163|dbj|BAJ15325.1| beta-lactamase tem precursor [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|306491151|gb|ADM95145.1| ampicillin resistance determinant [Cloning vector pGFPamy]
 gi|306491159|gb|ADM95151.1| ampicillin resistance determinant [Cloning vector pYFPamy]
 gi|306491167|gb|ADM95157.1| ampicillin resistance determinant [Cloning vector pCFPamy]
 gi|308826743|emb|CBX35997.1| Beta-lactamase TEM-1 [Escherichia coli]
 gi|309750554|gb|ADO80538.1| beta-lactamase [Haemophilus influenzae R2866]
 gi|309774078|gb|ADO95144.1| beta lactamase [Expression vector pPICK9KH1N1HA]
 gi|310686587|gb|ADP02961.1| Bla [Cloning vector pLR3]
 gi|312179387|gb|ADQ39589.1| beta-lactamase [Salmonella enterica subsp. enterica serovar Wien]
 gi|312191347|gb|ADQ43721.1| BLA [Expression vector pIGALBSTP]
 gi|313574897|emb|CBY43986.1| beta-lactamase [Cloning vector pTUY1H]
 gi|313652089|gb|ADR71675.1| AmpR [Retroviral Tet-shRNA expression vector TRMPV-Hygro]
 gi|313652094|gb|ADR71679.1| AmpR [Retroviral Tet-shRNA expression vector TRMPV-Neo]
 gi|313652098|gb|ADR71682.1| AmpR [Retroviral Tet-shRNA expression vector TRMPV-ns]
 gi|313652103|gb|ADR71686.1| AmpR [Retroviral Tet-shRNA expression vector TRMPVIR]
 gi|313652108|gb|ADR71690.1| AmpR [Retroviral Tet-shRNA expression vector TtRMPVIR]
 gi|313652113|gb|ADR71694.1| AmpR [Retroviral Tet-shRNA expression vector TtTMPV-Neo]
 gi|315252274|gb|EFU32242.1| beta-lactamase [Escherichia coli MS 85-1]
 gi|315617947|gb|EFU98542.1| beta-lactamase family protein [Escherichia coli 3431]
 gi|322366624|gb|ADW95392.1| beta-lactamase TEM-1B [Salmonella enterica subsp. enterica serovar
           Rissen]
 gi|323388294|gb|ADX60443.1| TEM beta-lactamase [Klebsiella pneumoniae]
 gi|323516301|gb|ADX90682.1| beta-lactamase TEM [Acinetobacter baumannii TCDC-AB0715]
 gi|323700881|gb|ADY00034.1| class A beta lactamase TEM-1 [Escherichia coli]
 gi|323709054|gb|ADY02540.1| TEM-1 [Escherichia coli]
 gi|323709058|gb|ADY02543.1| TEM-1 [Escherichia coli]
 gi|323903312|gb|ADY11076.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|323958858|gb|EGB54536.1| beta-lactamase [Escherichia coli H489]
 gi|324009181|gb|EGB78400.1| beta-lactamase [Escherichia coli MS 57-2]
 gi|324021202|gb|EGB90421.1| beta-lactamase [Escherichia coli MS 117-3]
 gi|324110968|gb|EGC04958.1| beta-lactamase [Escherichia fergusonii B253]
 gi|324976978|gb|ADY68343.1| beta-lactamase [Cloning vector pBAM1]
 gi|324976983|gb|ADY68347.1| beta-lactamase [Cloning vector pBAM1-GFP]
 gi|327536715|gb|AEA95547.1| beta-lactamase [Salmonella enterica subsp. enterica serovar Dublin]
 gi|330907835|gb|EGH36360.1| beta-lactamase [Escherichia coli AA86]
 gi|331081817|gb|EGI52975.1| beta-lactamase [Escherichia coli H299]
 gi|331687728|gb|AED88265.1| AmpR [Expression vector XN21_GW]
 gi|332015345|gb|AED99557.1| beta-lactamase [Enterobacter sp. W001]
 gi|332144556|dbj|BAK19774.1| TEM-type beta-lactamase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|332144558|dbj|BAK19775.1| TEM-type beta-lactamase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|332736730|gb|EGJ67720.1| beta-lactamase [Acinetobacter baumannii 6014059]
 gi|1089993|prf||2018199A beta lactamase IRT-4
          Length = 286

 Score = 56.1 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|298492563|ref|YP_003722740.1| beta-lactamase ['Nostoc azollae' 0708]
 gi|298234481|gb|ADI65617.1| beta-lactamase ['Nostoc azollae' 0708]
          Length = 508

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 92/276 (33%), Gaps = 15/276 (5%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +  L+     L+    N +P   ++D +TG    +   +  +  AS  K+      F  +
Sbjct: 186 IIPLTTTVQNLARPYPNLIPGVFMVDLDTGA-YVDINSNASFPAASTIKIPILITFFQDV 244

Query: 70  KEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
              K  L   +T+ K        S  T   GS  T  +    +I  S N     +   L 
Sbjct: 245 DAGKIRLDEMLTLQKEMISEGSGSLRTQAVGSQYTALDIATKMITISDNTATNMLVTRL- 303

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF 188
                  + +N   ++ GL+ T   N    +Q  +  + R++  L  ++       M   
Sbjct: 304 ----GGQEVLNERFRSWGLATTMIRNPLPDLQGTNTISPRELGDLIAKVNQGNLVSMRSR 359

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVILGAL 247
            +    ++  +  N     G   GA    KTG   +   +     I   +  IA ++  +
Sbjct: 360 DLMLDIMRRTERDNL-LPSGLGQGARAYHKTGDIGSMLGDAGLIDIPTGKRYIAAVM--V 416

Query: 248 DRNTRNKVSASLL----SMGFYNKTDRKKINYIIKD 279
            R   +  +  L+    S  + + +          +
Sbjct: 417 QRPNNDPSAEKLISSISSAAYQHFSQTTVTPRTPTN 452


>gi|110350794|emb|CAL08007.1| TEM-137 beta-lactamase [Shigella sonnei]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGRRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|14700044|gb|AAK71474.1| TEM-89 beta-lactamase [Proteus mirabilis]
          Length = 278

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
               N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMGDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEI 278


>gi|84570489|dbj|BAE72674.1| ampicillin resistant protein [Cloning vector pSU0]
 gi|154936855|dbj|BAF75372.1| ampicillin resistant protein [Cloning vector pSU22]
 gi|322392876|gb|ADW95860.1| beta-lactamase [Gene deletion vector pJL2]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    + S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCDTLLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDESDTTMPVAMP 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKRSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|221047950|gb|ACL98082.1| Amp [Expression vector pHsh-amp]
 gi|224611742|gb|ACN60073.1| Amp [Expression Vector pHsh-ex]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 73/270 (27%), Gaps = 13/270 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           +     +    V++              L+
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRLI 275


>gi|110610033|gb|ABG77582.1| extended spectrum beta-lactamase [Proteus mirabilis]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|301017556|ref|ZP_07182232.1| beta-lactamase [Escherichia coli MS 69-1]
 gi|3851588|gb|AAC72362.1| extended-spectrum beta-lactamase TEM-10 [Morganella morganii]
 gi|300400144|gb|EFJ83682.1| beta-lactamase [Escherichia coli MS 69-1]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|75428812|sp|Q48406|BLAT_KLEOX RecName: Full=Beta-lactamase TEM-12; Flags: Precursor
 gi|149169|gb|AAA25053.1| TEM-26B beta-lactamase [Klebsiella oxytoca]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|229594902|ref|XP_001021203.2| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila]
 gi|225566509|gb|EAS00958.2| D-alanyl-D-alanine carboxypeptidase family protein [Tetrahymena
           thermophila SB210]
          Length = 528

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 17/169 (10%)

Query: 125 ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT----- 179
           + +   ++ F++ MN  +    L  T F N HG+    + +   D+A L+++        
Sbjct: 360 QYVSDYQRYFLKEMNKIAMQFLLRCTQFSNPHGLANKLNKSNCNDLAKLTYKAMKWRLFR 419

Query: 180 ------DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                  +         +  ++        N       G  G+KTG T ++G  + +   
Sbjct: 420 KIVQTKTYLSKYKIINDQTQDVTYGTNFWKNTNKLLDQGYLGVKTGITTSAGSCLSSFYS 479

Query: 234 ------QGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYI 276
                 Q + S+I ++LG    + R   + S++        +++K N I
Sbjct: 480 NYVPSLQKNISVIVIVLGGYKSDDRFDDTQSIIDWYIKTLEEQQKSNKI 528



 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 28/115 (24%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                   AS+TK+MT  V     K+    ++         +                  
Sbjct: 186 NTYEIREMASITKIMTCLVSLKLAKKFDINVSEIYFSVSKTAVMNQLIFNSTIIYGKIXX 245

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
                 I      I   ++ +  +  K+    +            + +N +G   
Sbjct: 246 QKYPYGIDFLFYHIYYFLSLNYIQILKQVAFQLITKCFQFDFYLINQININGTTA 300


>gi|112785108|gb|ABI20744.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       M +       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMAVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|22725667|gb|AAN04881.1| beta-lactamase TEM-115 [Klebsiella pneumoniae]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|302487937|gb|ADL40245.1| TEM-1 beta-lactamase [Pseudomonas aeruginosa]
 gi|312949078|gb|ADR29904.1| beta-lactamase [Escherichia coli O83:H1 str. NRG 857C]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFSAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|45268493|gb|AAS55868.1| extended-spectrum beta-lactamase [Pseudomonas aeruginosa]
          Length = 274

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 75/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M      L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGEHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|303304754|emb|CBJ06718.1| extended-spectrum beta-lactamase [Proteus mirabilis]
          Length = 286

 Score = 55.8 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 14/277 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDH 49
           ++ F V +     +   P  +  ET                Y  LD N+G ++    P+ 
Sbjct: 3   IKHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEE 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V S +   +  L   I  S+N        +       MT+     
Sbjct: 63  RFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCS 122

Query: 110 LLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++   ++   F+ +M +    L         A    +    T A
Sbjct: 123 AAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTTPA 182

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   +  +        Q+       K       +          K+G        
Sbjct: 183 AMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSRG 242

Query: 228 IVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 243 IIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|25900617|emb|CAD24670.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSSGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|15149326|gb|AAK85243.1| inhibitor resistant TEM beta-lactamase [Escherichia coli]
 gi|15149332|gb|AAK85246.1| inhibitor resistant TEM beta-lactamase [Escherichia coli]
 gi|15149342|gb|AAK85251.1| inhibitor resistant TEM beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSSGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|2648043|emb|CAA65888.1| beta-lactamase [Serratia marcescens]
          Length = 285

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 81/275 (29%), Gaps = 17/275 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN-----------KLPYYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGSTSGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++  +++   F+ +M +    L            +      TT    
Sbjct: 126 TMSDNTAANLLLTTIGGSQELTAFLHNMGDHVTRLDRWEPELNE--AIPNDEADTTMPAA 183

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIV 229
              + R            + + ++    K                  K+G        I+
Sbjct: 184 MATTLRKLLTGELLTLASRQQLIDWMADKVAGPLLRSALPAGWFIADKSGARERGSRGII 243

Query: 230 ASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           A+     +   I VI     + T ++ +  +  +G
Sbjct: 244 AALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 278


>gi|20198333|gb|AAM15527.1|AF347054_1 inhibitor-resistant beta-lactamase TEM-80 [Enterobacter cloacae]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       +
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAV 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + R++  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 278


>gi|15485219|emb|CAC67290.1| beta lactamase TEM-95 [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGAKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|207849087|gb|ACI25375.1| beta-lactamase TEM-166 [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVGELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|145975407|gb|ABQ00181.1| CMT-type beta lactamase [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + R++  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 278


>gi|6176542|gb|AAF05611.1|AF190692_1 inhibitor-resistant beta-lactamase TEM-79 [Escherichia coli]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSGGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|4732115|gb|AAD28611.1| beta-lactamase [Cloning vector pWD42-09]
 gi|4928116|gb|AAD33413.1| beta-lactmase [Cloning vector pWDYcos1.0.1]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDPGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|38234569|ref|NP_940336.1| putative D-Ala D-Ala carboxypeptidase [Corynebacterium diphtheriae
           NCTC 13129]
 gi|38200832|emb|CAE50536.1| Putative D-Ala D-Ala carboxypeptidase [Corynebacterium diphtheriae]
          Length = 426

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 23/55 (41%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            L+           ++D  TG VI E   D P  PAS TK++TA      L  + 
Sbjct: 78  ALAQDPRLAGFAGKIVDATTGEVILEKDADKPLTPASATKMLTATAALYELGPEH 132


>gi|2589218|gb|AAB83984.1| beta lactamase [Cloning vector pTM30]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPPAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|454853|gb|AAA99042.1| beta-lactamase [unidentified cloning vector]
 gi|454856|gb|AAA99040.1| beta-lactamase [unidentified cloning vector]
          Length = 286

 Score = 55.8 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 79/276 (28%), Gaps = 18/276 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L            +      TT    
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNE--AIPNDERDTTMLYA 183

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCASGFNI 228
              + R            + + ++                        K+G        I
Sbjct: 184 MATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGI 243

Query: 229 VASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +A+     +   I VI     + T ++ +  +  +G
Sbjct: 244 IAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|288551658|gb|ACZ02437.2| extended spectrum beta-lactamase TEM-1 [Providencia rettgeri]
          Length = 278

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEI 278


>gi|110835657|emb|CAL26907.1| beta-lactamase protein [Acetobacter pasteurianus]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEI 278


>gi|297563881|ref|YP_003682854.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848330|gb|ADH70348.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 455

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              ++D  TG  + E  PD P  PAS TK+ TA  V   
Sbjct: 82  SGFVVDAATGETLFELDPDAPVTPASTTKIATAVAVLDA 120


>gi|257059487|ref|YP_003137375.1| beta-lactamase [Cyanothece sp. PCC 8802]
 gi|256589653|gb|ACV00540.1| beta-lactamase [Cyanothece sp. PCC 8802]
          Length = 425

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 66/228 (28%), Gaps = 6/228 (2%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               S     K   +  +D + G          P   AS  K+      F  L   K  L
Sbjct: 154 IATQSKYAKLKPQAWF-MDLDNGA-YVSVNGSVPVPAASTIKIPVLVAFFEALDAGKIHL 211

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
              +T+ K        N  +K   T          ++  +++ A  +            +
Sbjct: 212 DEILTMDKAIITSGAGNMQYKPPGTKFTALETATQMIVISDNTATDML----IRRLGGKE 267

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
            +N   ++ G++ T   N    ++  + TT  D++ L  RI+      +         ++
Sbjct: 268 ALNARFRDWGMTNTVINNRLPDLEGTNTTTPEDLSKLLARIERGEVLTLRSRDRLLGIMQ 327

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             +                 KTG   +   +     I   +  I  + 
Sbjct: 328 ETRTRTLLPQGLEKDAIISHKTGDIGSIIGDAGIIDIPNGKRYIGAVF 375


>gi|4557168|gb|AAD22539.1|AF104442_1 inhibitor resistant beta lactamase TEM-54 [Escherichia coli]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSLGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|74054894|gb|AAZ95768.1| putative TEM beta lactamase [bacterium RRLBTPL III-2]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 79/276 (28%), Gaps = 14/276 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMGFY 265
           +     +   I VI     + T ++ +  +  +G  
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGLS 281


>gi|296954|emb|CAA46345.1| extended spectrum beta-lactamase CAZ-6 [Klebsiella pneumoniae]
 gi|289065301|gb|ADC80803.1| extended spectrum beta-lactamase TEM-24 [Escherichia coli]
 gi|289065321|gb|ADC80822.1| extended spectrum beta-lactamase TEM-24 [Escherichia coli]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|1836181|gb|AAB46928.1| penicillin-binding protein, PBP=49 kda essential membrane-bound
          cell-wall synthesizing enzyme {N-terminal}
          [Mycobacterium smegmatis, Peptide Partial, 39 aa]
          Length = 39

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
                  L+D  TG ++ +   D     AS+TK+
Sbjct: 5  NINADAAILVDAETGKILYQKNADKVLGIASMTKM 39


>gi|76799931|ref|ZP_00781932.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae 18RS21]
 gi|76584715|gb|EAO61472.1| D-alanyl-D-alanine carboxypeptidase family protein [Streptococcus
           agalactiae 18RS21]
          Length = 188

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 9/130 (6%)

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA----LDRNTRNKVSASLLSMGFYN 266
            G  G+KTG T  +G + +A++ +    L+ VI+ A     D+  R   + SLL+     
Sbjct: 10  PGITGLKTGTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNT 69

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKI 326
                 +         +     V +  E+      +      Q K    +    I+F+K 
Sbjct: 70  YEPNLVLAKGAA---YKGKEASVRDGKEQSVIAVAKNDLKVVQKKNITKQNQLKINFKK- 125

Query: 327 TLLKNKITKK 336
             L   ITKK
Sbjct: 126 -ELTAPITKK 134


>gi|206813969|gb|ACI22621.1| extended-spectrum beta-lactamase SHV-105 [Klebsiella pneumoniae]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGSVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ +++    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIDDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|6273434|emb|CAA74912.2| beta-lactamase class A [Capnocytophaga ochracea]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|33318322|gb|AAQ05031.1|AF467990_1 extended spectrum beta-lactamase TEM [Klebsiella pneumoniae]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       +       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADRVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|467187|gb|AAA17345.1| pbpC [Mycobacterium leprae]
          Length = 182

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +        +        + + D N+G VIA   P     PAS+ K++ A 
Sbjct: 89  IVTAPDTPPVPGDLSAEAWLVADLNSGAVIAARDPHGRHRPASIIKVLLAM 139


>gi|190410144|ref|YP_001966135.1| TEM-1 beta lactamase gene [Neisseria gonorrhoeae]
 gi|89112911|gb|ABD61074.1| TEM-1 beta lactamase gene [Neisseria gonorrhoeae]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P LS  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVLSHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|56311400|emb|CAI29263.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKPAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|45925922|gb|AAS79107.1| class A beta-lactamase TEM-134 [Citrobacter koseri]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|48473853|emb|CAG34105.1| class A beta-lactamase [Klebsiella oxytoca]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|330878883|gb|EGH13032.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 181

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 5/148 (3%)

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A ++A S       F+  MN  +K LG+  T ++   G+  +   T      ++    K 
Sbjct: 1   AASLAHSYPGGYPAFILAMNAKAKALGMKHTAYVEPTGLSVYNVSTARDLTKLVMAARKY 60

Query: 180 DFPQYMHYFQIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQ 234
                +   + K +  +   Y     NT+  V          KTGFT  +G  +V     
Sbjct: 61  PMLSELSTTEQKMVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSM 120

Query: 235 GDQSLIAVILGALDRNTRNKVSASLLSM 262
            ++ +  VIL A  + T    ++ +   
Sbjct: 121 ANRPVSVVILDAFGKYTHFADASRIRKW 148


>gi|37778088|gb|AAR02602.1| beta lactamase [Expression vector pVTU260]
 gi|37778090|gb|AAR02603.1| beta lactamase [Expression vector pVTU263]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDVGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|166078576|gb|ABY81266.1| beta-lactamase [Escherichia coli]
          Length = 273

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 75/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T + 
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDD 270


>gi|484096|gb|AAB59975.1| extended-spectrum beta-lactamase TEM-10 [Klebsiella oxytoca]
          Length = 269

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 72/262 (27%), Gaps = 25/262 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G           
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSG----------- 234

Query: 231 SAIQGDQSLIAVILGALDRNTR 252
            A +     I   LG   + +R
Sbjct: 235 -AGKRGSRGIIAALGPDGKPSR 255


>gi|33286378|gb|AAQ01671.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|34558690|gb|AAQ75087.1| extended-spectrum beta-lactamase TEM-121 [Enterobacter aerogenes]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSSGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|241912505|gb|ACS71959.1| beta-lactamase [Basidiomycete basal gene deletion vector pDelcas]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGTRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|684934|gb|AAA87176.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGSVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|291586635|gb|ADE19118.1| extended-spectrum beta-lactamase TEM-116 [Pseudomonas fluorescens]
          Length = 278

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 185 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 244

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 245 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 278


>gi|291337179|gb|ADD96657.1| beta-lactamase [Serratia marcescens]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEEQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|269316615|gb|ACZ37307.1| beta-lactamase [Pannonibacter phragmitetus]
 gi|269316617|gb|ACZ37308.1| beta-lactamase [Burkholderia cenocepacia]
          Length = 285

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 185 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 244

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 245 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 278


>gi|225196235|gb|ACN82383.1| TEM-116 beta-lactamase [Aeromonas hydrophila]
 gi|225196237|gb|ACN82384.1| TEM-116 beta-lactamase [Aeromonas hydrophila]
 gi|225196239|gb|ACN82385.1| TEM-116 beta-lactamase [Aeromonas hydrophila]
 gi|225196241|gb|ACN82386.1| TEM-116 beta-lactamase [Aeromonas hydrophila]
 gi|225196243|gb|ACN82387.1| TEM-116 beta-lactamase [Aeromonas hydrophila]
 gi|225196245|gb|ACN82388.1| TEM-116 beta-lactamase [Aeromonas jandaei]
 gi|225196247|gb|ACN82389.1| TEM-116 beta-lactamase [Aeromonas jandaei]
 gi|225196249|gb|ACN82390.1| TEM-116 beta-lactamase [Aeromonas jandaei]
 gi|225196251|gb|ACN82391.1| TEM-116 beta-lactamase [Aeromonas jandaei]
 gi|225196253|gb|ACN82392.1| TEM-116 beta-lactamase [Aeromonas jandaei]
          Length = 284

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|145306442|gb|ABP57022.1| beta lactamase [Cloning vector pTrueBlue]
          Length = 283

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|47846294|emb|CAG30723.1| hypothetical protein [Hordeum vulgare subsp. vulgare]
 gi|254973018|gb|ACT98420.1| BlaD290 [Expression vector RHP-AmpS]
          Length = 285

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|55669167|gb|AAV54522.1| beta-lactamase [Enterobacteria phage M13 vector DY3F63]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGALVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|27804803|gb|AAO21433.1| extended-spectrum beta-lactamase/aminoglycoside modifying enzyme
           fusion protein [synthetic construct]
          Length = 586

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|5650761|gb|AAD45935.1|AF062386_1 inhibitor-resistant beta-lactamase [Klebsiella oxytoca]
          Length = 277

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 75/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
               N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMGDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|74054892|gb|AAZ95767.1| putative TEM beta lactamase [bacterium RRLBTPL IV-3]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|10956148|ref|NP_052129.1| beta-lactamase [Staphylococcus aureus]
 gi|10956150|ref|NP_052130.1| beta-lactamase [Staphylococcus aureus]
 gi|210613207|ref|ZP_03289627.1| hypothetical protein CLONEX_01829 [Clostridium nexile DSM 1787]
 gi|321313692|ref|YP_004205979.1| beta-lactamase TEM [Bacillus subtilis BSn5]
 gi|11266199|pir||T51301 beta-lactamase (EC 3.5.2.6) - fission yeast  (Schizosaccharomyces
           pombe)
 gi|67464382|pdb|1ZG4|A Chain A, Tem1 Beta Lactamase
 gi|4704644|gb|AAD28190.1|AF110459_3 beta-lactamase [Cloning vector pBBR1-GFP]
 gi|4732039|gb|AAD28564.1|AF118921_1 beta-lactamase [alk-system cloning vector pSPZ2Not]
 gi|4959728|gb|AAD34468.1|AF136443_1 beta-lactamase [Cloning vector pUC-TP]
 gi|5006905|gb|AAD37723.1|AF146395_1 beta-lactamase [Cloning vector pCLZip]
 gi|5702092|gb|AAD47138.1|AF061181_2 beta-lactamase [Mammalian expression vector pCI-nGL1-HEGO]
 gi|5733495|gb|AAD49607.1|AF147464_1 beta-lactamase [Expression vector pViet]
 gi|5802284|gb|AAD51639.1|AF170481_2 beta-lactamase [Cloning vector pUC19RP12]
 gi|5802288|gb|AAD51642.1|AF170482_3 beta-lactamase [Cloning vector pST76A-SceP]
 gi|5802293|gb|AAD51646.1|AF170483_4 beta-lactamase [Cloning vector pST98-AS]
 gi|5834245|gb|AAD53875.1|AF174493_1 beta-lactamase [Cloning vector pCL]
 gi|5929924|gb|AAD56648.1|AF178973_3 beta-lactamase [Cloning vector pCS512]
 gi|6318859|gb|AAF07048.1|AF178582_3 beta-lactamase [Expression vector pCS316]
 gi|6318867|gb|AAF07055.1|AF178583_5 beta-lactamase [Expression vector pSB229]
 gi|6457292|gb|AAF09456.1|AF179625_2 Amp [Shuttle vector pCS513]
 gi|6457302|gb|AAF09465.1|AF179626_6 Amp [Expression vector pGP100]
 gi|6457308|gb|AAF09469.1|AF179628_2 Amp [Shuttle vector pHIGEXhOR]
 gi|7108473|gb|AAF36428.1|AF125994_3 beta-lactamase [Shuttle vector pUCP-Nco]
 gi|7108477|gb|AAF36431.1|AF125995_3 beta-lactamase [Shuttle vector pUCP-Nde]
 gi|7637910|gb|AAF65255.1|AF222336_1 beta-lactamase [Cloning vector pTacSfi]
 gi|7715979|gb|AAF68231.1|AF203972_4 Bla [Shuttle vector pBA]
 gi|8037918|gb|AAF71532.1|AF253496_2 beta-lactamase precursor [Cloning vector pUC58]
 gi|9857880|gb|AAG00917.1|AF270470_1 beta-lactamase [Cloning vector pBIG]
 gi|9857883|gb|AAG00919.1|AF269225_1 beta-lactamase [Cloning vector pLITTLE]
 gi|9857886|gb|AAG00921.1|AF269226_1 beta lactamase [Cloning vector pTIKL]
 gi|9857890|gb|AAG00924.1|AF269235_2 beta lactamase [Cloning vector pDXA-GFP2]
 gi|9857894|gb|AAG00927.1|AF269236_2 beta lactamase [Cloning vector pDXA-FLAG]
 gi|9857897|gb|AAG00929.1|AF269237_1 beta lactamase [Cloning vector pTX-GFP]
 gi|9857901|gb|AAG00932.1|AF269238_1 beta lactamase [Cloning vector pTX-FLAG]
 gi|11991617|gb|AAG42304.1|AF305698_1 beta-lactamase [Cloning vector p824]
 gi|12082763|gb|AAG48609.1|AF310245_2 beta-lactamase [Cloning vector pGEM58ZNf(-)]
 gi|12958277|gb|AAK09280.1|AF311601_3 beta-lactamase [Reporter vector pJDL]
 gi|12965139|gb|AAK11473.1|AF334827_2 ampicillin resistance protein [Cloning vector pTurbo-Cre]
 gi|13161002|gb|AAK13448.1|AF325903_2 beta-lactamase [Cloning vector pFH2191]
 gi|13346452|gb|AAK19747.1|AF347016_2 beta-lactamase [Shuttle vector pYT3]
 gi|14009670|gb|AAK51707.1|AF338824_2 beta-lactamase [Cloning vector pVLH/int(+)]
 gi|14009673|gb|AAK51709.1|AF338825_2 beta-lactamase [Cloning vector pHLH/int(+)]
 gi|14039716|gb|AAK53367.1|AF362545_6 beta-lactamase [Co-reporter vector pHRL-TK]
 gi|14039720|gb|AAK53369.1|AF362546_6 beta-lactamase [Co-reporter vector phRL-null]
 gi|14039724|gb|AAK53371.1|AF362547_4 beta-lactamase [Co-reporter vector phRL-TK(Int-)]
 gi|14039728|gb|AAK53373.1|AF362548_6 beta-lactamase [Co-reporter vector phRL-SV40]
 gi|14039732|gb|AAK53375.1|AF362549_6 beta-lactamase [Co-reporter vector phRL-CMV]
 gi|14039736|gb|AAK53377.1|AF362550_6 beta-lactamase [Co-reporter vector phRG-B]
 gi|14039740|gb|AAK53379.1|AF362551_7 beta-lactamase [Co-reporter vector phRG-TK]
 gi|14290103|gb|AAK59252.1|AF379854_2 beta lactamase [Cloning vector pVLH/hsp]
 gi|16904154|gb|AAL30779.1|AF434923_2 beta-lactamase [Expression vector pIE1-LUC]
 gi|16904157|gb|AAL30781.1|AF434924_2 beta-lactamase [Expression vector pACTIN-LUC]
 gi|16904160|gb|AAL30783.1|AF434925_2 beta-lactamase [Expression vector 409-FOR]
 gi|16904163|gb|AAL30785.1|AF434926_2 beta-lactamase [Expression vector 409-MUT]
 gi|16904166|gb|AAL30787.1|AF434927_2 beta-lactamase [Expression vector 410-FOR]
 gi|16904169|gb|AAL30789.1|AF434928_2 beta-lactamase [Expression vector 411-FOR]
 gi|16904172|gb|AAL30791.1|AF434929_2 beta-lactamase [Expression vector 411-MUT]
 gi|16904175|gb|AAL30793.1|AF434930_2 beta-lactamase [Expression vector 412-FOR]
 gi|16904178|gb|AAL30795.1|AF434931_2 beta-lactamase [Expression vector 409-REV]
 gi|16904181|gb|AAL30797.1|AF434932_2 beta-lactamase [Expression vector 410-REV]
 gi|16904184|gb|AAL30799.1|AF434933_2 beta-lactamase [Expression vector 411-REV]
 gi|16904187|gb|AAL30801.1|AF434934_2 beta-lactamase [Expression vector 412-REV]
 gi|16930721|gb|AAL32025.1|AF438749_2 beta-lactamase [Cloning vector pANT841]
 gi|16930724|gb|AAL32027.1|AF438750_2 beta-lactamase [Cloning vector pANT846]
 gi|19550875|gb|AAL91564.1|AF484679_4 beta-lactamase [Cloning vector pRV-9]
 gi|20385950|gb|AAM21517.1|AF438205_3 beta lactamase [Mutation screening vector pSPRX]
 gi|20454204|gb|AAM22212.1|AF502128_2 beta-lactamase [Transient expression vector pBI221]
 gi|21637365|gb|AAM70477.1|AF515846_1 beta-lactamase [Cloning vector pTransgene]
 gi|21780277|gb|AAM77667.1|AF521666_2 beta-lactamase [Cloning vector pLOI2065]
 gi|28628789|gb|AAO49355.1|AF483548_2 beta lactamase [Mammalian expression vector pHyg-EF-2]
 gi|31249538|gb|AAP46190.1|AF515711_3 beta-lactamase [Cloning vector pNRSAL]
 gi|58162|emb|CAA45755.1| beta-lactamase [synthetic construct]
 gi|58165|emb|CAA45753.1| beta-lactamase [synthetic construct]
 gi|58183|emb|CAA46404.1| Beta-lactamase [Cloning vector pGEM-9Zf(-)]
 gi|58185|emb|CAA46417.1| beta-lactamase [Cloning vector pCAT-Basic]
 gi|58189|emb|CAA46416.1| beta-lactamase [Cloning vector pCAT-Control]
 gi|58191|emb|CAA46411.1| beta-lactamase [Cloning vector pCAT-Enhancer]
 gi|58195|emb|CAA46414.1| beta-lactamase [Cloning vector pCAT-Promoter]
 gi|58198|emb|CAA46393.1| Beta-lactamase [Cloning vector pGEM-2]
 gi|58200|emb|CAA46394.1| Beta-lactamase [Cloning vector pGEM-3]
 gi|58206|emb|CAA46395.1| Beta-lactamase [Cloning vector pGEM-4]
 gi|58218|emb|CAA46420.1| beta-lactamase [Cloning vector pGL2-Basic]
 gi|58221|emb|CAA46422.1| beta-lactamase [Cloning vector pGL2-Control]
 gi|58224|emb|CAA46424.1| beta-lactamase [Cloning vector pGL2-Enhancer]
 gi|58227|emb|CAA46426.1| beta-lactamase [Cloning vector pGL2-Promoter]
 gi|58230|emb|CAA46427.1| Beta-lactamase [Cloning vector pSP64]
 gi|58232|emb|CAA46428.1| Beta-lactamase [Cloning vector pSP64 (polyA)]
 gi|58234|emb|CAA46429.1| Beta-lactamase [Cloning vector pSP65]
 gi|58236|emb|CAA46430.1| Beta-lactamase [Cloning vector pSP70]
 gi|58238|emb|CAA46431.1| Beta-lactamase [Cloning vector pSP71]
 gi|58240|emb|CAA46432.1| Beta-lactamase [Cloning vector pSP72]
 gi|58242|emb|CAA46433.1| Beta-lactamase [Cloning vector pSP73]
 gi|58245|emb|CAA46435.1| Beta-lactamase [Cloning vector pSV-beta-Galactosidase Control]
 gi|146582|gb|AAA24057.1| beta-lactamase [Escherichia coli]
 gi|173016|gb|AAA72096.1| putative [Cloning vector pYSVE2]
 gi|208895|gb|AAA72533.1| beta-lactamase [unidentified cloning vector]
 gi|208898|gb|AAA72635.1| beta-lactamase
 gi|387897|gb|AAA72098.1| putative [Cloning vector pYADE4]
 gi|403938|gb|AAB61948.1| pre-beta-lactamase [unidentified cloning vector]
 gi|434647|gb|AAC40207.1| beta-lactamase [Cloning vector pUC1918]
 gi|434651|gb|AAB60533.1| beta-lactamase [Cloning vector pX1918]
 gi|434654|gb|AAC53605.1| beta-lactamase [Cloning vector pZ1918]
 gi|440201|gb|AAA67177.1| beta-lactamase [Cloning vector pUCGM]
 gi|452345|emb|CAA82704.1| beta-lactamase [synthetic construct]
 gi|452347|emb|CAA82705.1| unnamed protein product [synthetic construct]
 gi|453623|emb|CAA54104.1| beta lactamase [synthetic construct]
 gi|453627|emb|CAA54107.1| beta lactamase [synthetic construct]
 gi|455365|gb|AAA73141.1| beta-lactamase [unidentified cloning vector]
 gi|455366|gb|AAA73139.1| beta-lactamase [unidentified cloning vector]
 gi|455367|gb|AAA72527.1| beta-lactamase [Cloning vector pHSG664]
 gi|455371|gb|AAA72687.1| beta-lactamase [unidentified cloning vector]
 gi|460936|gb|AAB40008.1| beta-lactamase [Cloning vector pUCP18]
 gi|460940|gb|AAB40011.1| beta-lactamase [Cloning vector pUCP20]
 gi|460944|gb|AAB40015.1| beta-lactamase [Cloning vector pUCP22]
 gi|469219|dbj|BAA03488.1| beta-lactamase [Cloning vector pKF2]
 gi|499100|gb|AAA73435.1| beta-lactamase [Cloning vector pDB31]
 gi|520998|emb|CAA84692.1| beta lactamase [Enterobacteria phage phiX174]
 gi|531831|gb|AAA73458.1| beta-lactamase [Cloning vector pSport1]
 gi|531835|gb|AAA67219.1| beta-lactamase [Cloning vector pSport2]
 gi|537454|gb|AAA66979.1| beta-lactamase [Cloning vector pSG932]
 gi|537457|gb|AAA66981.1| beta-lactamase [Cloning vector pSG931]
 gi|537460|gb|AAA66983.1| beta-lactamase [Cloning vector pSG930]
 gi|537463|gb|AAA66985.1| beta-lactamase [Cloning vector pSG929]
 gi|537466|gb|AAA66987.1| beta-lactamase [Cloning vector pSG927]
 gi|537469|gb|AAA66989.1| beta-lactamase [Cloning vector pSG928]
 gi|537472|gb|AAA66992.1| beta-lactamase [Cloning vector pSG935]
 gi|537475|gb|AAA66993.1| beta-lactamase [Cloning vector pSG934]
 gi|537478|gb|AAA66995.1| beta-lactamase [Cloning vector pSG933]
 gi|537481|gb|AAA66997.1| beta-lactamase [Cloning vector pSG926]
 gi|537486|gb|AAA66999.1| beta-lactamase [Cloning vector pSG925]
 gi|540253|gb|AAA67265.1| beta-lactamase [Cloning vector pSVSport1]
 gi|559519|emb|CAA57679.1| beta-lactamase [synthetic construct]
 gi|567891|gb|AAA53119.1| beta-lactamase [unidentified cloning vector]
 gi|567894|gb|AAA53121.1| beta-lactamase [unidentified cloning vector]
 gi|575448|gb|AAA67269.1| beta-lactamase [Cloning vector pTRXFUS]
 gi|595704|gb|AAA57085.1| beta-lactamase [unidentified cloning vector]
 gi|595763|gb|AAA56731.1| beta-lactamase [unidentified cloning vector]
 gi|595766|gb|AAA56733.1| beta-lactamase [unidentified cloning vector]
 gi|595769|gb|AAA56735.1| beta-lactamase [unidentified cloning vector]
 gi|595771|gb|AAA56736.1| beta-lactamase [unidentified cloning vector]
 gi|595776|gb|AAA56739.1| beta-lactamase [unidentified cloning vector]
 gi|595778|gb|AAA56740.1| beta-lactamase [unidentified cloning vector]
 gi|595781|gb|AAA56742.1| beta-lactamase [unidentified cloning vector]
 gi|603173|gb|AAA57321.1| beta-lactamase [Cloning vector pUCSce]
 gi|603176|gb|AAA57323.1| beta-lactamase [Cloning vector pEX100T]
 gi|603180|gb|AAA57326.1| beta-lactamase [Cloning vector pX1918G]
 gi|603184|gb|AAA57329.1| beta-lactamase [Cloning vector pX1918GT]
 gi|644833|gb|AAA64568.1| beta-lactamase [Cloning vector pGlac]
 gi|644836|gb|AAA64570.1| beta-lactamase [Cloning vector pGlacRSV]
 gi|682655|gb|AAA74941.1| beta-lactamase [Cloning vector pYEULCBX]
 gi|691758|gb|AAA62619.1| beta-lactamase [Cloning vector YIp351]
 gi|806874|gb|AAA66378.1| beta-lactamase [Cloning vector pLUC/LIC]
 gi|806877|gb|AAA66380.1| beta-lactamase [Cloning vector pBluescript II KS<+>/LIC]
 gi|806880|gb|AAA66382.1| beta-lactamase [Cloning vector pGEM-7Zf<+>/LIC-R]
 gi|806882|gb|AAA66383.1| beta-lactamase [Cloning vector pT7/Nde]
 gi|806888|gb|AAA66385.1| beta-lactamase [Cloning vector pCAT/LIC]
 gi|806891|gb|AAA66387.1| beta-lactamase [Cloning vector pGEM-7Zf<+>/LIC-F]
 gi|806893|gb|AAA66388.1| beta-lactamase [Cloning vector pT7/Nco]
 gi|833824|gb|AAB06693.1| beta-lactamase [Cloning vector pBBR1MCS-4]
 gi|894141|gb|AAA69676.1| beta-lactamase [Cloning vector p35S-GFP]
 gi|915334|gb|AAA85559.1| ampicillin resistance protein [Cloning vector pKMZB]
 gi|984891|gb|AAC53607.1| beta-lactamase [Cloning vector pBSL119]
 gi|984894|gb|AAC53609.1| beta-lactamase [Cloning vector pBSL121]
 gi|984897|gb|AAC53611.1| beta-lactamase [Cloning vector pBSL128]
 gi|984900|gb|AAC53613.1| beta-lactamase [Cloning vector pBSL130]
 gi|984903|gb|AAC53615.1| beta-lactamase [Cloning vector pBSL141]
 gi|984906|gb|AAC53617.1| beta-lactamase [Cloning vector pBSL142]
 gi|984908|gb|AAC53618.1| beta-lactamase [Cloning vector pBSL159]
 gi|984911|gb|AAC53620.1| beta-lactamase [Cloning vector pBSL168]
 gi|984919|gb|AAC53626.1| beta-lactamase [Cloning vector pBSL190]
 gi|984922|gb|AAC53628.1| beta-lactamase [Cloning vector pBSL193]
 gi|984925|gb|AAC53630.1| beta-lactamase [Cloning vector pBSL97]
 gi|984928|gb|AAC53632.1| beta-lactamase [Cloning vector pBSL99]
 gi|984930|gb|AAC53633.1| beta-lactamase [Cloning vector pBSL167]
 gi|988212|gb|AAA96384.1| ampicillin resistance [Cloning vector pAS2-1]
 gi|1016009|gb|AAC33181.1| beta-lactamase [Cloning vector pDAP2]
 gi|1045527|gb|AAB39956.1| beta-lactamase [Staphylococcus aureus]
 gi|1045529|gb|AAB39957.1| beta-lactamase [Staphylococcus aureus]
 gi|1045582|gb|AAA80248.1| beta-lactamase [Cloning vector pHUKH1]
 gi|1045588|gb|AAA80253.1| beta-lactamase [Cloning vector pHUKH2]
 gi|1045594|gb|AAA80258.1| beta-lactamase [Cloning vector pHUKH3]
 gi|1045600|gb|AAA80263.1| beta-lactamase [Cloning vector pHUKH4]
 gi|1049258|gb|AAA80349.1| beta-lactamase [Shuttle vector pAD-GAL4]
 gi|1049261|gb|AAA80351.1| beta-lactamase [Shuttle vector pBD-GAL4]
 gi|1052970|gb|AAA80673.1| beta-lactamase [Cloning vector YRTAG300]
 gi|1073247|gb|AAA81772.1| beta-lactamase [Cloning vector pBVI02]
 gi|1132427|gb|AAA84371.1| beta-lactamase [Cloning vector pTriplEx]
 gi|1144477|gb|AAA86124.1| beta lactamase [Cloning vector pUCP20T]
 gi|1144524|gb|AAA84935.1| beta-lactamase [Cloning vector pI-LINK]
 gi|1150735|gb|AAA85183.1| beta-lactamase [Cloning vector pTAG4]
 gi|1197673|gb|AAA88780.1| beta-lactamase [Cloning vector pCI]
 gi|1197676|gb|AAA88782.1| beta-lactamase [Cloning vector pCI-neo]
 gi|1197678|gb|AAA88783.1| beta-lactamase [Cloning vector pSI]
 gi|1197681|gb|AAA88785.1| beta-lactamase [Cloning vector pSP-luc+]
 gi|1197684|gb|AAA88787.1| beta-lactamase [Cloning vector pSP-luc+NF]
 gi|1200458|gb|AAA89081.1| beta-lactamase [Cloning vector pAdVantage]
 gi|1200461|gb|AAA89083.1| beta-lactamase [Cloning vector pGL3-Basic]
 gi|1200464|gb|AAA89085.1| beta-lactamase [Cloning vector pGL3-Control]
 gi|1200467|gb|AAA89087.1| beta-lactamase [Cloning vector pGL3-Enhancer]
 gi|1200470|gb|AAA89089.1| beta-lactamase [Cloning vector pGL3-Promoter]
 gi|1200492|gb|AAA89091.1| beta-lactamase [Cloning vector PinPoint Xa-1]
 gi|1200495|gb|AAA89093.1| beta-lactamase [Cloning vector PinPoint Xa-2]
 gi|1200498|gb|AAA89095.1| beta-lactamase [Cloning vector PinPoint Xa-3]
 gi|1228976|emb|CAA65432.1| beta-lactamase [synthetic construct]
 gi|1228978|emb|CAA65428.1| beta-lactamase [synthetic construct]
 gi|1228980|emb|CAA65429.1| beta-lactamase [synthetic construct]
 gi|1277159|gb|AAB08400.1| beta-lactamase [Expression vector pNEX]
 gi|1277161|gb|AAB08055.1| beta-lactamase [Expression vector pNEX delta]
 gi|1335983|gb|AAB01196.1| beta-lactamase [Cloning vector pVP-Nco]
 gi|1335986|gb|AAB01198.1| beta-lactamase [Cloning vector pVP-HA1]
 gi|1335989|gb|AAB01200.1| beta-lactamase [Cloning vector pVP-HA2]
 gi|1335992|gb|AAB01202.1| beta-lactamase [Cloning vector pVP-HA3]
 gi|1335995|gb|AAB01204.1| beta-lactamase [Cloning vector pVP-FLAG]
 gi|1345435|dbj|BAA12825.1| beta-lactamase [Cloning vector pBEN66]
 gi|1354499|gb|AAB07867.1| beta-lactamase [Cloning vector pCI-nGFP-C656G]
 gi|1373275|gb|AAB02236.1| beta lactamase [Cloning vector pODB8]
 gi|1377903|gb|AAB02569.1| beta-lactamase [Baculovirus transfer vector pBacPAK-His1]
 gi|1377905|gb|AAB02570.1| beta-lactamase [Baculovirus transfer vector pBacPAK-His2]
 gi|1377907|gb|AAB02571.1| beta-lactamase [Baculovirus transfer vector pBacPAK-His3]
 gi|1399734|gb|AAB39972.1| beta-lactamase [Reporter vector pCAT3-Basic vector]
 gi|1399737|gb|AAB39974.1| beta-lactamase [Reporter vector pCAT3-Control vector]
 gi|1399740|gb|AAB39976.1| beta-lactamase [Reporter vector pCAT3-Enhancer vector]
 gi|1399743|gb|AAB39978.1| beta-lactamase [Reporter vector pCAT3-Promoter vector]
 gi|1488685|gb|AAC53681.1| beta-lactamase [Recombination vector pAdlox]
 gi|1490530|gb|AAB06049.1| beta-lactamase [Cloning vector pGFPuv]
 gi|1515458|gb|AAC12960.1| beta-lactamase [Cloning vector pOPRSVIMCS]
 gi|1527193|gb|AAB88908.1| beta-lactamase [Expression vector pESP-I]
 gi|1561768|gb|AAB08871.1| beta-lactamase [Expression vector pNEX2]
 gi|1561770|gb|AAB08872.1| beta-lactamase [Expression vector pNEX3]
 gi|1595818|gb|AAB49942.1| AmpR [Cloning vector pGBD-C1]
 gi|1595822|gb|AAB49945.1| AmpR [Cloning vector pGBD-C2]
 gi|1595826|gb|AAB49948.1| AmpR [Cloning vector pGBD-C3]
 gi|1595830|gb|AAB49951.1| AmpR [Cloning vector pGBDU-C1]
 gi|1595834|gb|AAB49954.1| AmpR [Cloning vector pGBDU-C2]
 gi|1595838|gb|AAB49957.1| AmpR [Cloning vector pGBDU-C3]
 gi|1595842|gb|AAB49960.1| AmpR [Cloning vector pGAD-C1]
 gi|1595846|gb|AAB49963.1| AmpR [Cloning vector pGAD-C2]
 gi|1595850|gb|AAB49966.1| AmpR [Cloning vector pGAD-C3]
 gi|1649039|gb|AAB17670.1| beta-lactamase [Cloning Vector pJF5]
 gi|1680652|gb|AAC44581.1| beta-lactamase [Methylobacillus sp. KT1]
 gi|1684625|emb|CAA70547.1| blaTEM [synthetic construct]
 gi|1684628|emb|CAA70549.1| blaTEM [synthetic construct]
 gi|1685275|gb|AAB36779.1| beta-lactamase [Assembly vector pNOMAD1]
 gi|1685277|gb|AAB36780.1| beta-lactamase [Assembly vector pNOMAD2]
 gi|1698775|gb|AAB37298.1| beta-lactamase [Cloning vector pZGT5]
 gi|1724063|gb|AAC53676.1| beta-lactamase [Cloning vector pRAY-1]
 gi|1769872|emb|CAA71018.1| beta-lactamase [unidentified cloning vector]
 gi|1769879|emb|CAA71022.1| beta-lactamase [unidentified cloning vector]
 gi|1834348|emb|CAA71925.1| beta-lactamase [synthetic construct]
 gi|1834351|emb|CAA71923.1| beta-lactamase [synthetic construct]
 gi|1842042|gb|AAB91427.1| beta-lactamase [Expression vector pESP-2]
 gi|1899164|gb|AAB49977.1| beta-lactamase [unidentified cloning vector]
 gi|1899168|gb|AAB49980.1| beta-lactamase [unidentified cloning vector]
 gi|1899171|gb|AAB49982.1| beta-lactamase [unidentified cloning vector]
 gi|1902779|dbj|BAA19239.1| beta-lactamase [Cloning vector pBEN77]
 gi|1902897|dbj|BAA19465.1| beta-lactamase [Cloning vector pBEN70]
 gi|2058307|emb|CAA73226.1| beta lactamase [Escherichia coli K-12]
 gi|2071946|gb|AAB53628.1| beta-lactamase [Expression vector pBSII-LUCINT]
 gi|2190697|gb|AAB64384.1| beta-lactamase [unidentified cloning vector]
 gi|2190702|gb|AAB64387.1| beta-lactamase [unidentified cloning vector]
 gi|2190705|gb|AAB64389.1| beta-lactamase [unidentified cloning vector]
 gi|2190708|gb|AAB64391.1| beta-lactamase [unidentified cloning vector]
 gi|2190710|gb|AAB64392.1| beta-lactamase [unidentified cloning vector]
 gi|2190713|gb|AAB64394.1| beta-lactamase [unidentified cloning vector]
 gi|2190715|gb|AAB64395.1| beta-lactamase [unidentified cloning vector]
 gi|2190719|gb|AAB64398.1| beta-lactamase [unidentified cloning vector]
 gi|2190724|gb|AAB64401.1| beta-lactamase [unidentified cloning vector]
 gi|2190727|gb|AAB64403.1| beta-lactamase [unidentified cloning vector]
 gi|2190730|gb|AAB64405.1| beta-lactamase [unidentified cloning vector]
 gi|2190733|gb|AAB64407.1| beta-lactamase [unidentified cloning vector]
 gi|2208942|emb|CAA73316.1| lactamase [synthetic construct]
 gi|2218118|gb|AAC33183.1| beta-lactamase [synthetic construct]
 gi|2218121|gb|AAC33185.1| beta-lactamase [synthetic construct]
 gi|2218145|gb|AAB61669.1| beta-lactamase [Cloning vector pEX18T]
 gi|2239040|emb|CAA73270.1| lactamase [synthetic construct]
 gi|2267565|gb|AAB63580.1| beta lactamase [DNA-binding vector pODB80]
 gi|2281527|gb|AAB65664.1| beta-lactamase [Cloning vector pGFPCR]
 gi|2293132|gb|AAB68659.1| ampicillin resistance [unidentified cloning vector]
 gi|2342751|gb|AAB67757.1| beta-lactamase [Shuttle vector pSEmp18BBXM]
 gi|2353793|gb|AAB68846.1| beta-lactamase [Cloning vector pUC-JK]
 gi|2358011|gb|AAB68952.1| beta-lactamase [Cloning vector pGR8]
 gi|2440158|emb|CAA75107.1| beta-lactamase [Phagemid cloning vector pTZ19R]
 gi|2440161|emb|CAA75109.1| beta-lactamase [Phagemid cloning vector pTZ19U]
 gi|2462914|emb|CAA74920.1| lactamase [synthetic construct]
 gi|2462916|emb|CAA74921.1| lactamase [synthetic construct]
 gi|2462920|emb|CAA74926.1| beta lactamase [synthetic construct]
 gi|2522427|gb|AAB81041.1| beta-lactamase [Cloning vector pWSK29]
 gi|2582511|gb|AAB82574.1| beta-lactamase [Co-reporter vector pRL-CMV]
 gi|2582514|gb|AAB82576.1| beta-lactamase [Co-reporter vector pRL-Null]
 gi|2582517|gb|AAB82578.1| beta-lactamase [Co-reporter vector pRL-SV40]
 gi|2582520|gb|AAB82580.1| beta-lactamase [Co-reporter vector pRL-TK]
 gi|2598099|gb|AAB83988.1| beta-lactamase [Expression vector pLUC+]
 gi|2598102|gb|AAB83990.1| beta-lactamase [Expression vector pTATALUC+]
 gi|2598105|gb|AAB83992.1| beta-lactamase [Expression vector ptkLUC+]
 gi|2598108|gb|AAB83994.1| beta-lactamase [Expression vector pCMVtkLUC+]
 gi|2623119|gb|AAC53719.1| beta-lactamase [Expression vector pIB1]
 gi|2623122|gb|AAC53721.1| beta-lactamase [Expression vector pIB2]
 gi|2623125|gb|AAC53723.1| beta-lactamase [Expression vector pIB3]
 gi|2623128|gb|AAC53725.1| beta-lactamase [Expression vector pIB4]
 gi|2623974|emb|CAA05682.1| beta-lactamase [synthetic construct]
 gi|2623980|emb|CAA05685.1| beta-lactamase [synthetic construct]
 gi|2623982|emb|CAA05686.1| beta-lactamase [synthetic construct]
 gi|2623986|emb|CAA05689.1| beta-lactamase [synthetic construct]
 gi|2654778|gb|AAB88045.1| pre-beta-lactamase [Phagemid cloning vector pATCH1]
 gi|2656022|dbj|BAA23652.1| beta-lactamase [Cloning vector pAP3neo]
 gi|2739059|gb|AAC31621.1| beta-lactamase [Cloning vector pUC-GM-INT]
 gi|2739065|gb|AAC31624.1| beta-lactamase [unidentified cloning vector]
 gi|2739069|gb|AAC31627.1| beta-lactamase [unidentified cloning vector]
 gi|2769263|emb|CAA04868.1| beta-lactamase [Escherichia coli]
 gi|2801656|gb|AAC40217.1| beta-lactamase [Cloning vector yGALset351]
 gi|2801658|gb|AAC40218.1| beta-lactamase [Cloning vector yGALset352]
 gi|2801660|gb|AAC40219.1| beta-lactamase [Cloning vector yGALset401]
 gi|2801662|gb|AAC40220.1| beta-lactamase [Cloning vector yGALset983]
 gi|2801664|gb|AAC40221.1| beta-lactamase [Cloning vector yGALset984]
 gi|2801666|gb|AAC40222.1| beta-lactamase [Cloning vector yGALset985]
 gi|2852396|gb|AAC40209.1| beta-lactamase [Cloning vector pBIOTRX-BirA]
 gi|2961157|gb|AAC27034.1| beta lactamase [site-specific excision vector pFLP2]
 gi|2981188|gb|AAC78772.1| beta-lactamase [Expression vector pYZ1N]
 gi|2981193|gb|AAC78776.1| beta-lactamase [Expression vector pYZ3N-GFP]
 gi|3002524|gb|AAC08735.1| ampicillin resistance protein [Expression vector pRIBOTEX]
 gi|3025716|gb|AAC12727.1| B-lactamase [Cloning vector pVLH-1]
 gi|3108235|gb|AAC15801.1| ampicillin resistance protein [Eukaryotic expression vector
           pCR3.1mBCL-XL]
 gi|3114618|gb|AAD08914.1| ampicillin resistance protein [Cloning vector pFR-Luc]
 gi|3123922|gb|AAC40215.1| beta-lactamase [Reporter vector p2luc]
 gi|3136319|gb|AAC78829.1| beta-lactamase [Expression vector pYZ41N]
 gi|3136323|gb|AAC78832.1| beta-lactamase [Expression vector pYZ81N]
 gi|3243010|gb|AAC23868.1| beta-lactamase [Expression vector pBEVY-A]
 gi|3243013|gb|AAC23870.1| beta-lactamase [Expression vector pBEVY-GA]
 gi|3243016|gb|AAC23872.1| beta-lactamase [Expression vector pBEVY-GL]
 gi|3243018|gb|AAC23873.1| beta-lactamase [Expression vector pBEVY-GT]
 gi|3243021|gb|AAC23875.1| beta-lactamase [Expression vector pBEVY-GU]
 gi|3243024|gb|AAC23877.1| beta-lactamase [Expression vector pBEVY-L]
 gi|3243027|gb|AAC23879.1| beta-lactamase [Expression vector pBEVY-T]
 gi|3243030|gb|AAC23881.1| beta-lactamase [Expression vector pBEVY-U]
 gi|3273768|gb|AAC24837.1| ampicillin resistance protein [Cloning vector PCMV6-XL4]
 gi|3273770|gb|AAC24838.1| ampicillin resistance protein [Cloning vector PCMV6-XL3]
 gi|3435309|gb|AAC32394.1| beta-lactamase [Expression vector pSKAP/S]
 gi|3808122|emb|CAA09781.1| beta-lactamase [Promoter search vector pME4507]
 gi|3834581|gb|AAC72101.1| beta-lactamase [Dual pho-lac fusion vector pMA632]
 gi|3882023|emb|CAA77108.1| beta lactamase [Expression vector pSTE2-215(Yol)]
 gi|4028600|gb|AAC97515.1| beta-lactamase [Cloning vector pHR'-CMVLacZ]
 gi|4097014|gb|AAD10134.1| beta-lactamase [Expression vector pBMRz]
 gi|4097016|gb|AAD10135.1| beta-lactamase [Expression vector pBRz]
 gi|4097018|gb|AAD10136.1| beta-lactamase [Expression vector pB5T-MRz]
 gi|4097020|gb|AAD10137.1| beta-lactamase [Expression vector pB10T-MRz]
 gi|4210486|gb|AAD11973.1| beta-lactamase [Cloning vector pFR-Bgal]
 gi|4379389|emb|CAA75111.1| beta-lactamase [Cloning vector pUC57]
 gi|4455912|emb|CAB37331.1| beta-lactamase [Cloning vector pU6H2MYC]
 gi|4455915|emb|CAB37333.1| beta-lactamase [Cloning vector pU6H3HA]
 gi|4455918|emb|CAB37335.1| beta-lactamase [Cloning vector pU6H3VSV]
 gi|5354162|gb|AAD42380.1| beta-lactamase [Cloning vector pCMV-AD]
 gi|5420150|emb|CAA46406.2| beta-lactamase [Cloning vector pGEM-13Zf(+)]
 gi|5420375|emb|CAA46405.2| Beta-lactamase [Cloning vector pGEM-11Zf(+)]
 gi|5441564|emb|CAB46857.1| Beta-lactamase [Cloning vector pGEM-11Zf(-)]
 gi|5531233|emb|CAA46398.2| beta-lactamase [Cloning vector pGEM-3Zf(+)]
 gi|5640090|emb|CAB51568.1| beta-lactamase [Expression vector pCDPT]
 gi|5701826|emb|CAA46400.2| Beta-lactamase [Cloning vector pGEM-5Zf(+)]
 gi|5758123|gb|AAD50688.1| beta-lactamase [Cloning vector pUNI(Amp)]
 gi|5758125|gb|AAD50689.1| beta-lactamase [Cloning vector pUNI(Amp)-MYC3]
 gi|5758127|gb|AAD50690.1| beta-lactamase [Cloning vector pUNI(Amp)-HA3]
 gi|5758129|gb|AAD50691.1| beta-lactamase [Cloning vector pUNI(Amp)-GFP]
 gi|5758131|gb|AAD50692.1| beta-lactamase [Cloning vector pUNI(Amp)-GST]
 gi|5758133|gb|AAD50693.1| beta-lactamase [Cloning vector pUNI(Amp)-DBD]
 gi|5758135|gb|AAD50694.1| beta-lactamase [Cloning vector pUNI(Amp)-AD]
 gi|6010469|gb|AAF01143.1| beta-lactamase [Integrative vector pWLG11]
 gi|6010472|gb|AAF01145.1| beta-lactamase [Integrative expression vector pWLG13]
 gi|6010475|gb|AAF01147.1| beta-lactamase [Integrative expression vector pWLG14]
 gi|6010478|gb|AAF01149.1| beta-lactamase [Expression shuttle vector pWLG30]
 gi|6457347|gb|AAF09486.1| beta lactamase [Cloning vector pTEX-Z]
 gi|6467481|gb|AAF13157.1| ampicillin-resistance protein [Integration vector pLOI2223]
 gi|6467487|gb|AAF13160.1| ampicillin-resistance protein [Integration vector pLOI2226]
 gi|6687357|emb|CAA46403.2| Beta-lactamase [Cloning vector pGEM-7Zf(-)]
 gi|6782313|emb|CAA46396.2| beta-lactamase [Cloning vector pGEM-3Z]
 gi|6782315|emb|CAA46397.2| beta-lactamase [Cloning vector pGEM-4Z]
 gi|6822255|emb|CAB70976.1| beta-lactamase [Synechocystis promoter probe vector pIGA]
 gi|6901347|emb|CAB71924.1| beta-lactamase [Synechocystis promoter probe vector pILA]
 gi|7340793|emb|CAA08827.1| beta-lactamase [synthetic construct]
 gi|7380885|dbj|BAA93041.1| beta-lactamase [Shuttle vector pRES19]
 gi|7799032|emb|CAB90821.1| beta-lactamase [Cloning vector pKID18]
 gi|7799035|emb|CAB90823.1| beta-lactamase [Cloning vector pKID19]
 gi|8050588|gb|AAF71714.1| beta-lactamase [Cloning vector pUC21]
 gi|8216947|emb|CAA46399.2| Beta-lactamase [Cloning vector pGEM-3Zf(-)]
 gi|8216949|emb|CAA46401.2| Beta-lactamase [Cloning vector pGEM-5Zf(-)]
 gi|8216951|emb|CAA46402.2| Beta-lactamase [Cloning vector pGEM-7Zf(+)]
 gi|8216953|emb|CAA46409.2| Beta-lactamase [Cloning vector pGEMEX-1]
 gi|8216955|emb|CAA46410.2| Beta-lactamase [Cloning vector pGEMEX-2]
 gi|8250169|emb|CAA46408.2| Beta-lactamase [Cloning vector pGEM-luc]
 gi|8272486|gb|AAF74222.1| beta-lactamase [Shuttle vector pPha-T1]
 gi|8346633|emb|CAB93899.1| penicillin beta-lactamase [Artificial vector pLoxCat2]
 gi|8346636|emb|CAB93901.1| penicillin beta-lactamase [Artificial vector pLoxGen4]
 gi|8346639|emb|CAB93903.1| penicillin beta-lactamase [Artificial vector pLoxKan2]
 gi|8346642|emb|CAB93905.1| penicillin beta-lactamase [Artificial vector pLoxCat4]
 gi|8843953|gb|AAF80182.1| beta-lactamase precursor [Expression vector pSB2991]
 gi|9587165|gb|AAF89183.1| beta-lactamase [Cloning Vector pACT]
 gi|9587170|gb|AAF89187.1| beta-lactamase [Cloning Vector pG5luc]
 gi|10504975|gb|AAG18332.1| beta-lactamase [Cloning vector pUC6S]
 gi|11061109|emb|CAC14452.1| penicillin beta-lactamase [Cloning vector pBPSCat2]
 gi|11061116|emb|CAC14455.1| penicillin beta-lactamase [Cloning vector pBPSGen4]
 gi|11061122|emb|CAC14458.1| penicillin beta-lactamase [Cloning vector pBPSKan2]
 gi|11344868|gb|AAG34513.1| ampicillin resistance protein [PCR template vector pUG30]
 gi|11344872|gb|AAG34516.1| ampicillin resistance protein [recombinase expression vector pSH47]
 gi|11344876|gb|AAG34519.1| ampicillin resistance protein [C-terminal GFP fusion vector pUG23]
 gi|11344880|gb|AAG34522.1| ampicillin resistance protein [N-terminal GFP fusion vector pUG34]
 gi|11344884|gb|AAG34525.1| ampicillin resistance protein [recombinase expression vector pSH62]
 gi|11344887|gb|AAG34527.1| ampicillin resistance protein [Cloning vector pUG26]
 gi|11344891|gb|AAG34530.1| ampicillin resistance protein [C-terminal GFP fusion vector pUG35]
 gi|11344894|gb|AAG34532.1| ampicillin resistance protein [PCR template vector pJJH726]
 gi|11344898|gb|AAG34535.1| ampicillin resistance protein [recombinase expression vector pSH63]
 gi|11344901|gb|AAG34537.1| ampicillin resistance protein [PCR template vector pUG27]
 gi|11344905|gb|AAG34540.1| ampicillin resistance protein [N-terminal GFP fusion vector pUG36]
 gi|11344908|gb|AAG34542.1| ampicillin resistance protein [PCR template vector pJJH727]
 gi|11344911|gb|AAG34544.1| ampicillin resistance protein [PCR template vector pUG6]
 gi|11344914|gb|AAG34546.1| ampicillin resistance protein [PCR template vector pUG66]
 gi|11344917|gb|AAG34548.1| ampicillin resistance protein [Cloning vector pUG7]
 gi|11344920|gb|AAG34550.1| ampicillin resistance protein [recombinase expression vector pSH65]
 gi|12034710|gb|AAG45963.1| beta lactamase [Expression vector AF286076]
 gi|12034713|gb|AAG45964.1| beta lactamase [Expression vector AF286077]
 gi|12584847|gb|AAG59856.1| beta-lactamase [Cloning vector pSGHV0]
 gi|12698838|gb|AAK01700.1| ampicillin resistance protein [Cloning vector pExchange 1]
 gi|12698840|gb|AAK01701.1| ampicillin resistance protein [Expression vector pExchange 2]
 gi|12698915|gb|AAK01733.1| ampicillin resistance protein [Envelope expression vector pVpack
           10A1]
 gi|12831144|gb|AAK08491.1| beta-lactamase [HIV-1 vector pNL4-3]
 gi|13027703|gb|AAK08634.1| beta-lactamase [Integration vector pINT]
 gi|13236870|gb|AAK16201.1| beta-lactamase [Cloning vector pUC13]
 gi|13345298|gb|AAK19284.1| beta-lactamase [Cloning vector pPOP]
 gi|13508479|gb|AAK27302.1| beta-lactamase [Binary vector pPAM]
 gi|14456626|emb|CAC41115.1| beta lactamase [Cloning vector pGRL2]
 gi|14517315|gb|AAK62568.1| beta-lactamase [Cloning vector pJAP8]
 gi|14594738|emb|CAC40642.1| beta lactamase [Cloning vector pGRU1]
 gi|14594742|emb|CAC40631.1| beta lactamase [Cloning vector pGRU3]
 gi|14594746|emb|CAC40624.1| beta lactamase [Cloning vector pGRU2]
 gi|14594750|emb|CAC40617.1| beta lactamase [Cloning vector pGIL2]
 gi|14594754|emb|CAC40627.1| beta lactamase [Cloning vector pGRL3]
 gi|14594758|emb|CAC41106.1| beta lactamase [Cloning vector pGIU3]
 gi|14594762|emb|CAC41120.1| beta lactamase [Cloning vector pGIU1]
 gi|14594766|emb|CAC41097.1| beta lactamase [Cloning vector pGIL3]
 gi|14594770|emb|CAC41112.1| beta lactamase [Cloning vector pGIL1]
 gi|14594774|emb|CAC41100.1| beta lactamase [Cloning vector pGRL1]
 gi|14594796|emb|CAC40620.1| beta lactamase [Cloning vector pGIU2]
 gi|14994092|gb|AAK76420.1| beta-lactamase [Cloning vector pAAV-RC]
 gi|14994095|gb|AAK76422.1| beta-lactamase [Cloning vector pAAV-LacZ]
 gi|14994097|gb|AAK76423.1| beta-lactamase [Cloning vector pHelper]
 gi|14994099|gb|AAK76424.1| beta-lactamase [Cloning vector pCMV-MCS]
 gi|15072759|emb|CAC47941.1| beta-lactamase [Cloning vector pHCMV-LCMV-GP(WE-HPI)]
 gi|15072762|emb|CAC47943.1| beta-lactamase [Cloning vector pHCMV-LCMV-GP(WE)]
 gi|15072765|emb|CAC47945.1| beta-lactamase [Cloning vector pHCMV-VSV-G]
 gi|15072768|emb|CAC47947.1| beta-lactamase [Cloning vector pHCMV-A-MLVenv]
 gi|15148787|gb|AAK84839.1| beta-lactamase [Cloning vector pAAV-MCS]
 gi|15554331|gb|AAL02034.1| beta-lactamase [Template plasmid pKD3]
 gi|15554334|gb|AAL02036.1| beta-lactamase [Template plasmid pKD4]
 gi|15554337|gb|AAL02038.1| beta-lactamase [Template plasmid pKD13]
 gi|15554344|gb|AAL02044.1| beta-lactamase [Red recombinase plasmid pKD20]
 gi|15554351|gb|AAL02050.1| beta-lactamase [Red recombinase plasmid pKD46]
 gi|15982215|emb|CAC86250.1| ampicillin resistance protein [Cloning vector pHANNIBAL]
 gi|16118710|gb|AAL14558.1| beta-lactamase [Cloning vector pCNS]
 gi|16209074|gb|AAL09851.1| bla [CRIM helper plasmid pAH57]
 gi|16209080|gb|AAL09854.1| bla [CRIM plasmid pAH68]
 gi|16209085|gb|AAL09858.1| bla [CRIM helper plasmid pAH69]
 gi|16209091|gb|AAL09861.1| bla [CRIM plasmid pAH81]
 gi|16209097|gb|AAL09866.1| bla [CRIM helper plasmid pAH83]
 gi|16209116|gb|AAL09878.1| bla [CRIM helper plasmid pAH122]
 gi|16209123|gb|AAL09882.1| bla [CRIM helper plasmid pAH123]
 gi|16209130|gb|AAL09887.1| bla [CRIM helper plasmid pAH129]
 gi|16209135|gb|AAL09891.1| bla [CRIM helper plasmid pAH130]
 gi|16209142|gb|AAL09896.1| bla [CRIM helper plasmid pAH131]
 gi|16209185|gb|AAL09918.1| bla [CRIM helper plasmid pINT-ts]
 gi|17530180|gb|AAL40736.1| beta-lactamase [synthetic construct]
 gi|17530183|gb|AAL40738.1| beta-lactamase [synthetic construct]
 gi|17530187|gb|AAL40741.1| beta-lactamase [synthetic construct]
 gi|18140171|gb|AAL59003.1| beta-lactamase [Expression vector pFHC2101]
 gi|18252135|gb|AAL61982.1| beta lactamase Bla [Expression vector pANT1200]
 gi|18766964|gb|AAL79197.1| beta-lactamase [Cloning vector pNOT218]
 gi|18997121|gb|AAL83302.1| AmpR [Expression vector pCMVTNT(TM)]
 gi|18997125|gb|AAL83304.1| AmpR [Expression vector pTNT(TM)]
 gi|22000952|gb|AAM82291.1| beta-lactamase [Transposon delivery vector pSC189]
 gi|22001015|gb|AAM82246.1| beta lactamase [Expression vector pCMH148]
 gi|22001017|gb|AAM82247.1| beta lactamase [Expression vector pCMH149]
 gi|22347654|gb|AAM95950.1| beta-lactamase [Cloning vector pDblet]
 gi|22651572|gb|AAM19718.1| beta-lactamase [Allelic exchange vector pCM184]
 gi|22651576|gb|AAM19721.1| beta-lactamase [Allelic exchange vector pCM351]
 gi|23429673|gb|AAM98715.1| B-lactamase [cloning vector pSM565]
 gi|23821170|emb|CAD53306.1| beta-lactamase [Cloning vector pDXA-3hygro]
 gi|23821173|emb|CAD53308.1| beta-lactamase [Cloning vector pDXA-CFP]
 gi|23821177|emb|CAD53311.1| beta-lactamase [Cloning vector pDXA-yFP]
 gi|23821181|emb|CAD53292.1| beta-lactamase [Cloning vector pDXA-CFP-MCS]
 gi|23821185|emb|CAD53295.1| beta-lactamase [Cloning vector pDXA-YFP-MCS]
 gi|23821189|emb|CAD53298.1| beta-lactamase [Cloning vector pDXA-YFP-NotI]
 gi|23821193|emb|CAD53301.1| beta-lactamase [Cloning vector pDXA-MCS-YFP]
 gi|23821197|emb|CAD53304.1| beta-lactamase [Cloning vector pDXA-3strep]
 gi|23821200|emb|CAD53314.1| beta-lactamase [Cloning vector pDXA-3FLAG]
 gi|23821203|emb|CAD53316.1| beta-lactamase [Cloning vector pDXA-GST]
 gi|25990176|gb|AAN74641.1| beta-lactamase [Cloning vector pCAT-3']
 gi|27524898|emb|CAC87990.1| beta-lactamase [Binary cloning vector pAC161]
 gi|27652164|gb|AAO17064.1| beta lactamase [synthetic construct]
 gi|27803715|gb|AAO21932.1| beta-lactamase [Expression vector pYPX251]
 gi|28170641|emb|CAD61222.1| ampicillin resistance protein [synthetic construct]
 gi|28170644|emb|CAD61224.1| ampicillin resistance protein [synthetic construct]
 gi|28394602|gb|AAO38722.1| beta-lactamase [Expression vector pYPX4062]
 gi|28395448|gb|AAO39006.1| beta-lactamase [Cloning vector pFabZip1]
 gi|28412262|gb|AAO39982.1| beta-lactamase [Shuttle vector pSOS96]
 gi|28412269|gb|AAO39988.1| beta-lactamase [Shuttle vector pSOS94]
 gi|28412276|gb|AAO39994.1| beta-lactamase [Shuttle vector pSOS95]
 gi|28864236|gb|AAO48590.1| beta-lactamase [Expression vector pBS-35S-Rluc]
 gi|28864239|gb|AAO48592.1| beta-lactamase [Expression vector pBS-35S-YFP]
 gi|28864242|gb|AAO48594.1| beta-lactamase [Expression vector pBS-35S-Ala-Rluc]
 gi|28864245|gb|AAO48596.1| beta-lactamase [Expression vector pBS-35S-Rluc-Ala]
 gi|28864248|gb|AAO48598.1| beta-lactamase [Expression vector pBS-35S-Ala-YFP]
 gi|28864251|gb|AAO48600.1| beta-lactamase [Expression vector pBS-35S-YFP-Ala]
 gi|28883210|gb|AAO43181.1| B-lactamase [Monster GFP vector phMGFP]
 gi|29150586|gb|AAO63173.1| beta-lactamase [Cloning vector pHRGFPTC]
 gi|29150591|gb|AAO63177.1| beta-lactamase [Cloning Vector pHRGFPGUS]
 gi|29335745|emb|CAD83082.1| beta lactamase [Transfection vector pBTdest]
 gi|29367641|gb|AAO83380.1| beta-lactamase [Expression vector pHA-SP]
 gi|29415433|gb|AAO12753.1| beta-lactamase [CRIM plasmid pKD15]
 gi|29415714|gb|AAO12757.1| beta-lactamase [CRIM plasmid pKD16]
 gi|29423756|gb|AAO73815.1| beta-lactamase [Expression vector pNEX delta R]
 gi|29468589|gb|AAO48722.1| beta-lactamase [Cloning vector pVCDcDL3]
 gi|29468596|gb|AAO48715.1| beta-lactamase [Cloning vector pVCDcDL1]
 gi|29469037|gb|AAO49810.1| beta-lactamase [Expression vector pNEX delta F]
 gi|29650762|gb|AAO86501.1| beta lactamase precursor [Cloning vector pQTEV]
 gi|29825789|gb|AAO92324.1| beta lactamase [cloning vector pAM2600]
 gi|29837144|dbj|BAC75545.1| beta-lactamase [Cloning vector pXcmkn12]
 gi|30014057|gb|AAO92241.1| beta-lactamase [Cloning vector pHR3-km]
 gi|30014063|gb|AAO92246.1| beta-lactamase [Cloning vector pHR28A10]
 gi|30025559|gb|AAP04592.1| beta-lactamase [Cloning vector pHR50]
 gi|30039624|gb|AAP06957.1| beta-lactamase [Expression vector pMH]
 gi|30424553|gb|AAO24788.1| ampicillin resistance determinant [Shuttle vector pSK5632]
 gi|30523398|gb|AAP31915.1| beta-lactamase [Cloning vector pHRE1-km]
 gi|30984056|gb|AAP41141.1| beta-lactamase [Cloning vector pHRBar-6]
 gi|31415495|gb|AAP44987.1| beta-lactamase [Shuttle vector pNG168]
 gi|32140409|gb|AAP69524.1| beta lactamase [Transposition vector RescueMu]
 gi|32351113|gb|AAP75626.1| beta-lactamase [Insertional cloning vector pCM168]
 gi|32351119|gb|AAP75631.1| beta-lactamase [Insertional expression vector pCM172]
 gi|32455183|gb|AAP83302.1| beta-lactamase [Luciferase reporter vector pCBR-Basic]
 gi|32455186|gb|AAP83304.1| beta-lactamase [Luciferase reporter vector pCBR-Control]
 gi|32455189|gb|AAP83306.1| beta-lactamase [Luciferase reporter vector pCBG68-Basic]
 gi|32455192|gb|AAP83308.1| beta-lactamase [Luciferase reporter vector pCBG68-Control]
 gi|32455195|gb|AAP83310.1| beta-lactamase [Luciferase reporter vector pCBG99-Basic]
 gi|32455199|gb|AAP83313.1| beta-lactamase [Luciferase reporter vector pCBG99-Control]
 gi|33149673|gb|AAP96917.1| beta-lactamase [Cloning vector pT3]
 gi|33520708|gb|AAQ21189.1| beta-lactamase [Reporter vector pGUSA]
 gi|37575399|gb|AAQ93651.1| beta-lactamase [Ribosome display vector pRDV]
 gi|37623890|gb|AAQ95605.1| mutant extended-spectrum beta-lactamase precursor [Escherichia
           coli]
 gi|37654590|gb|AAQ96625.1| beta lactamase [CFP Integration vector pSMUC2+]
 gi|37654594|gb|AAQ96628.1| beta lactamase [YFP Integration vector pSMUY2+]
 gi|37654598|gb|AAQ96631.1| beta lactamase [Degron tagging vector pSMUG2+]
 gi|37654602|gb|AAQ96634.1| beta lactamase [Degron tagging vector pSMRG2+]
 gi|37812659|gb|AAR04147.1| beta lactamase [UAS-less reporter vector pMELbeta]
 gi|37812665|gb|AAR04151.1| beta lactamase [UAS-less reporter vector YIpMELbeta2]
 gi|37812670|gb|AAR04155.1| beta lactamase [UAS-less reporter vector YIpMELbeta]
 gi|37812672|gb|AAR04156.1| beta lactamase [UAS-less reporter vector YIpMELalpha]
 gi|37812680|gb|AAR04162.1| beta lactamase [UAS-less reporter vector pMELbeta2]
 gi|37812683|gb|AAR04164.1| beta lactamase [UAS-less reporter vector YIpMELalpha2]
 gi|38155840|gb|AAR12689.1| beta-lactamase [Expression vector pcGlobin 2]
 gi|38155843|gb|AAR12691.1| beta-lactamase [Expression vector pcGlobin 2-GST]
 gi|38197735|gb|AAR13800.1| beta-lactamase [Cloning vector pMACSiBac]
 gi|38231645|gb|AAR14724.1| beta-lactamase [Binary vector pAMPAT-MCS]
 gi|38385704|gb|AAR19395.1| ampicillin resistance protein [Cloning vector pTA6]
 gi|38524582|dbj|BAD00011.2| beta-lactamase [Cloning vector pGreen]
 gi|38565538|gb|AAR24091.1| beta-lactamase [Lentiviral transfer vector pHsCXW]
 gi|39636980|gb|AAR29085.1| beta-lactamase [Reporter vector pActXYN]
 gi|39636995|gb|AAR29088.1| beta-lactamase [Reporter vector pUbiGUSPlus]
 gi|39653984|gb|AAR29592.1| beta-lactamase [Reporter vector pGL3(R2.1)]
 gi|39653987|gb|AAR29594.1| beta-lactamase [Reporter vector pGL3(R2.2)]
 gi|39653990|gb|AAR29596.1| beta-lactamase [Reporter vector phRG(R2.1)]
 gi|39653993|gb|AAR29598.1| beta-lactamase [Reporter vector phRG(R2.2)]
 gi|39654023|gb|AAR29600.1| beta-lactamase [Reporter vector pUbiSXR]
 gi|39726212|gb|AAR30045.1| beta-lactamase [Integration vector pPyr-Cm]
 gi|39726215|gb|AAR30047.1| beta-lactamase [Integration vector pPyr-Kan]
 gi|39726218|gb|AAR30049.1| beta-lactamase [Integration vector pGlt-Cm]
 gi|39726221|gb|AAR30051.1| beta-lactamase [Integration vector pGlt-Kan]
 gi|39726224|gb|AAR30053.1| beta-lactamase [Integration vector pSac-Cm]
 gi|39726227|gb|AAR30055.1| beta-lactamase [Integration vector pSac-Kan]
 gi|40549339|gb|AAR87725.1| beta-lactamase [Cloning vector pSM47]
 gi|40804927|gb|AAR91724.1| b-lactamase [Cloning vector psiSTRIKE Basic]
 gi|40804930|gb|AAR91726.1| b-lactamase [Cloning vector psiSTRIKE Hygromycin]
 gi|40804932|gb|AAR91727.1| b-lactamase [Cloning vector psiSTRIKE Puromycin]
 gi|40804935|gb|AAR91729.1| b-lactamase [Cloning Vector psiSTRIKE Neomycin]
 gi|41584255|gb|AAS09816.1| beta-lactamase [Cloning vector piggyBac_PB]
 gi|41584258|gb|AAS09818.1| beta-lactamase [Cloning vector piggyBac_RB]
 gi|41584261|gb|AAS09820.1| beta-lactamase [Cloning vector piggyBac_WH]
 gi|42405464|gb|AAS13538.1| beta-lactamase [Plant binary vector pXCS-HAStrep]
 gi|42494367|gb|AAS17530.1| beta-lactamase [Cloning vector pAGA3]
 gi|42718121|gb|AAS38483.1| beta-lactamase [RNA interference vector psiCHECK(TM)-1]
 gi|42718125|gb|AAS38486.1| beta-lactamase [RNA interference vector psiCHECK(TM)-2]
 gi|42733309|dbj|BAD11211.1| ampicillin resistance protein [Expression vector pTip-NH1]
 gi|42733316|dbj|BAD11217.1| ampicillin resistance protein [Expression vector pTip-CH1]
 gi|42733323|dbj|BAD11223.1| ampicillin resistance protein [Expression vector pTip-NH2]
 gi|42733330|dbj|BAD11229.1| ampicillin resistance protein [Expression vector pTip-CH2]
 gi|42733337|dbj|BAD11235.1| ampicillin resistance protein [Expression vector pTip-LNH1]
 gi|42733344|dbj|BAD11241.1| ampicillin resistance protein [Expression vector pTip-LCH1]
 gi|42733351|dbj|BAD11247.1| ampicillin resistance protein [Expression vector pTip-LNH2]
 gi|42733358|dbj|BAD11253.1| ampicillin resistance protein [Expression vector pTip-LCH2]
 gi|42733365|dbj|BAD11259.1| ampicillin resistance protein [Expression vector pTip-NH1.2]
 gi|42733372|dbj|BAD11265.1| ampicillin resistance protein [Expression vector pTip-CH1.2]
 gi|42733379|dbj|BAD11271.1| ampicillin resistance protein [Expression vector pTip-NH2.2]
 gi|42733386|dbj|BAD11277.1| ampicillin resistance protein [Expression vector pTip-CH2.2]
 gi|42733393|dbj|BAD11283.1| ampicillin resistance protein [Expression vector pTip-LNH1.2]
 gi|42733400|dbj|BAD11289.1| ampicillin resistance protein [Expression vector pTip-LCH1.2]
 gi|42733407|dbj|BAD11295.1| ampicillin resistance protein [Expression vector pTip-LNH2.2]
 gi|42733414|dbj|BAD11301.1| ampicillin resistance protein [Expression vector pTip-LCH2.2]
 gi|42741001|gb|AAS44579.1| beta lactamase [Gene trapping vector pEU334AN]
 gi|42741009|gb|AAS44586.1| beta lactamase [Gene trapping vector pEU334bn]
 gi|44894086|gb|AAS48585.1| b-lactamase [Mammalian expression vector pTargeT]
 gi|44894183|gb|AAS48632.1| beta-lactamase [Cloning vector pGABI1]
 gi|44894186|gb|AAS48634.1| beta-lactamase [Cloning vector pADIS1]
 gi|45738209|gb|AAS75869.1| beta-lactamase [Expression vector pHCMV-SARS-S (FFM-1)]
 gi|45758346|gb|AAS76483.1| beta-lactamase [Cloning vector pHyVec1]
 gi|45861224|gb|AAS78489.1| Amp [Cloning vector pZero++ Amp]
 gi|45861231|gb|AAS78494.1| Amp [Cloning vector pPRCG]
 gi|45861237|gb|AAS78499.1| Amp [Cloning vector pTCCR]
 gi|45861244|gb|AAS78505.1| Amp [Cloning vector pTCCR-Auto]
 gi|46310186|gb|AAS87367.1| beta-lactamase [Cloning vector pHyVec2]
 gi|46850196|gb|AAT02531.1| beta-lactamase [Cloning vector pUC-gfp-neo]
 gi|46850473|gb|AAT02645.1| beta-lactamase [Cloning vector pHyVec3]
 gi|47027944|gb|AAT08986.1| beta-lactamase [FRT source vector pFRT2]
 gi|47027947|gb|AAT08988.1| beta-lactamase [Gentamycin resistance FRT vector pFGM1]
 gi|47027950|gb|AAT08990.1| beta-lactamase [Chloramphenicol resistance FRT vector pFCM1]
 gi|47027953|gb|AAT08992.1| beta-lactamase [Kanamycin resistance FRT vector pFKM1]
 gi|47027960|gb|AAT08998.1| beta-lactamase [Flp expression vector pFLP3]
 gi|47078188|gb|AAT09788.1| beta-lactamase [Baculovirus expression vector pFastBac1-HM]
 gi|47132184|gb|AAT11763.1| beta-lactamase [Cloning vector pUC18-mini-Tn7]
 gi|47132186|gb|AAT11764.1| beta-lactamase [Cloning vector pUC18-mini-Tn7T]
 gi|47132188|gb|AAT11765.1| beta-lactamase [Cloning vector pUC18-R6K-mini-Tn7T]
 gi|47132190|gb|AAT11766.1| beta-lactamase [Cloning vector pUC18Pv-mini-Tn7T]
 gi|47132192|gb|AAT11767.1| beta-lactamase [Cloning vector pUC18T-mini-Tn7T]
 gi|47132195|gb|AAT11769.1| beta-lactamase [Cloning vector pUC18-mini-Tn7T-Gm]
 gi|47132198|gb|AAT11771.1| beta-lactamase [Cloning vector pUC18T-mini-Tn7T-Gm]
 gi|47132202|gb|AAT11774.1| beta-lactamase [Cloning vector pUC18-mini-Tn7T-Gm-lacZ]
 gi|47132206|gb|AAT11777.1| beta-lactamase [Cloning and expression vector pUC18-mini-Tn7T-LAC]
 gi|47174898|gb|AAT12433.1| beta-lactamase [Cloning vector pWormgate2]
 gi|47524498|gb|AAT34981.1| beta-lactamase [Expression vector pMF272]
 gi|47524501|gb|AAT34983.1| beta-lactamase [Expression vector pMF280]
 gi|47524504|gb|AAT34985.1| beta-lactamase [Expression vector pMF309]
 gi|47563664|dbj|BAD20287.1| ampicillin resistance protein [Expression vector pCop-H1]
 gi|47563667|dbj|BAD20289.1| ampicillin resistance protein [Expression vector pCop-H2]
 gi|47563670|dbj|BAD20291.1| ampicillin resistance protein [Expression vector pCop-F1]
 gi|47563673|dbj|BAD20293.1| ampicillin resistance protein [Expression vector pCop-F2]
 gi|48237780|gb|AAT40741.1| beta-lactamase [Phage display vector pTDisp]
 gi|48237783|gb|AAT40743.1| beta-lactamase [Phage display vector pTScDisp]
 gi|48475419|gb|AAT44339.1| ampicillin resistance protein [Shuttle vector pFNLTP1]
 gi|48475426|gb|AAT44345.1| ampicillin resistance protein [Temperature-sensitive shuttle vector
           pFNLTP9]
 gi|49779994|gb|AAT68455.1| beta-lactamase [psiSTRIKE hMGFP vector]
 gi|51090248|dbj|BAD35134.1| beta-lactamase [Expression vector pColdI]
 gi|51090251|dbj|BAD35136.1| beta-lactamase [Expression vector pColdII]
 gi|51090254|dbj|BAD35138.1| beta-lactamase [Expression vector pColdIII]
 gi|51090257|dbj|BAD35140.1| beta-lactamase [Expression vector pColdIV]
 gi|51493752|gb|AAU04864.1| beta-lactamase [Mariner transposase delivery vector pFA545]
 gi|51534179|emb|CAH18716.1| beta-lactamase [Cloning vector pUCTV2]
 gi|51890424|dbj|BAD42597.1| ampicillin resistance protein [Expression vector pTip-QC1]
 gi|51890431|dbj|BAD42603.1| ampicillin resistance protein [Expression vector pTip-QC2]
 gi|51890438|dbj|BAD42609.1| ampicillin resistance protein [Expression vector pTip-QT1]
 gi|51890445|dbj|BAD42615.1| ampicillin resistance protein [Expression vector pTip-QT2]
 gi|51890452|dbj|BAD42621.1| ampicillin resistance protein [Expression vector pTip-RC1]
 gi|51890458|dbj|BAD42626.1| ampicillin resistance protein [Expression vector pTip-RC2]
 gi|51890464|dbj|BAD42631.1| ampicillin resistance protein [Expression vector pTip-RT1]
 gi|51890470|dbj|BAD42636.1| ampicillin resistance protein [Expression vector pTip-RT2]
 gi|51890474|dbj|BAD42639.1| ampicillin resistance protein [Expression vector pNit-QC1]
 gi|51890479|dbj|BAD42643.1| ampicillin resistance protein [Expression vector pNit-QC2]
 gi|51890484|dbj|BAD42647.1| ampicillin resistance protein [Expression vector pNit-QT1]
 gi|51890489|dbj|BAD42651.1| ampicillin resistance protein [Expression vector pNit-QT2]
 gi|51890494|dbj|BAD42655.1| ampicillin resistance protein [Expression vector pNit-RC1]
 gi|51890498|dbj|BAD42658.1| ampicillin resistance protein [Expression vector pNit-RC2]
 gi|51890502|dbj|BAD42661.1| ampicillin resistance protein [Expression vector pNit-RT1]
 gi|51890506|dbj|BAD42664.1| ampicillin resistance protein [Expression vector pNit-RT2]
 gi|51989435|gb|AAU21232.1| beta-lactamase [Plant expression vector pPILY]
 gi|51989437|gb|AAU21233.1| beta-lactamase [Plant expression vector pPESiTc]
 gi|51989439|gb|AAU21234.1| beta-lactamase [Plant expression vector pPESiTb]
 gi|51989441|gb|AAU21235.1| beta-lactamase [Plant expression vector pPESiTa]
 gi|51989443|gb|AAU21236.1| beta-lactamase [Plant expression vector pMESHI]
 gi|51989445|gb|AAU21237.1| beta-lactamase [Plant expression vector pMENCHU]
 gi|51989447|gb|AAU21238.1| beta-lactamase [Plant expression vector pLOLA]
 gi|51989449|gb|AAU21239.1| beta-lactamase [Plant expression vector pGIGI]
 gi|52354840|gb|AAU44622.1| beta-lactamase [Cloning vector pJK95]
 gi|53791213|dbj|BAD52432.1| beta-lactamase [Cloning vector pKA1U5]
 gi|53791215|dbj|BAD52433.1| beta-lactamase [Cloning vector pGCAP1]
 gi|53829087|gb|AAU94550.1| beta-lactamase [pGeneClip Basic cloning vector]
 gi|53829089|gb|AAU94551.1| beta-lactamase [pGeneClip hMGFP Vector]
 gi|53829092|gb|AAU94553.1| beta-lactamase [pGeneClip Hygromycin Vector]
 gi|53829095|gb|AAU94555.1| beta-lactamase [pGeneClip Neomycin Vector]
 gi|53829098|gb|AAU94557.1| beta-lactamase [pGeneClip Puromycin Vector]
 gi|53829616|gb|AAU94687.1| beta-lactamase [Cloning vector pUC18-mini-Tn7-Gm]
 gi|53829621|gb|AAU94691.1| beta lactamase [Cloning vector pUC18-mini-Tn7-LACM15]
 gi|53829624|gb|AAU94693.1| beta lactamase [Cloning vector pUC18R6K-mini-Tn7T-Km]
 gi|54033266|emb|CAH60311.1| betalactamase TEM-116 [Escherichia coli]
 gi|54033268|emb|CAH60312.1| betalactamase TEM-116 [Escherichia coli]
 gi|54033270|emb|CAH60313.1| betalactamase TEM-116 [Escherichia coli]
 gi|54043008|gb|AAV28496.1| beta lactamase [Cloning vector pUC18-mini-Tn7T-Gm-Gateway]
 gi|54043011|gb|AAV28498.1| beta lactamase [Cloning vector pUC18-mini-Tn7T-Tp]
 gi|54043016|gb|AAV28502.1| beta lactamase [Cloning vector pUC18-mini-Tn7T-Tp-Gateway]
 gi|55535620|gb|AAV52870.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.10[luc2]]
 gi|55535623|gb|AAV52872.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.11[luc2P]]
 gi|55535626|gb|AAV52874.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.12[luc2CP]]
 gi|55535629|gb|AAV52876.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.13[luc2/SV40]]
 gi|55535632|gb|AAV52878.1| synthetic beta-lactamase [Renilla luciferase reporter vector
           pGL4.70[hRluc]]
 gi|55535635|gb|AAV52880.1| synthetic beta-lactamase [Renilla luciferase reporter vector
           pGL4.71[hRlucP]]
 gi|55535638|gb|AAV52882.1| synthetic beta-lactamase [Renilla luciferase reporter vector
           pGL4.72[hRlucCP]]
 gi|55535641|gb|AAV52884.1| synthetic beta-lactamase [Renilla luciferase reporter vector
           pGL4.73[hRluc/SV40]]
 gi|55535644|gb|AAV52886.1| synthetic beta-lactamase [Renilla luciferase reporter vector
           pGL4.74[hRluc/TK]]
 gi|55535647|gb|AAV52888.1| synthetic beta-lactamase [Renilla luciferase reporter vector
           pGL4.75[hRluc/CMV]]
 gi|55669169|gb|AAV54523.1| beta-lactamase [Phagemid vector pMID21]
 gi|56089684|gb|AAV70826.1| beta-lactamase [Expression vector pHT2]
 gi|56119175|gb|AAV73951.1| beta-lactamase [siRNA vector pAAV9(5)-CMV-EGFP-CytB-AS-ohneBgl]
 gi|56119178|gb|AAV73953.1| beta-lactamase [siRNA vector pSUPER-CMV-DsRed2N1-CytB-AS]
 gi|56119181|gb|AAV73955.1| beta-lactamase [siRNA vector pSUPER-CMV-EGFP-CytB-AS]
 gi|56119184|gb|AAV73957.1| beta-lactamase [siRNA vector pSUPER-CMV-EGFP-CytB-AS-ohneBgl]
 gi|56119187|gb|AAV73959.1| beta-lactamase [siRNA vector pSUPER-hSyn-DsRed2N1-CytB-AS]
 gi|56119190|gb|AAV73961.1| beta-lactamase [siRNA vector pSUPER-hSyn-EGFP-CytB-AS]
 gi|56119192|gb|AAV73962.1| beta-lactamase [siRNA vector pAAV9(5)-CMV-DsRed2N1-CytB-AS-ohneNot]
 gi|56119196|gb|AAV73965.1| beta-lactamase [siRNA vector pAAV9(5)-CMV-EGFP-CytB-AS-ohneBgl]
 gi|56119199|gb|AAV73967.1| beta-lactamase [siRNA vector pAAV9(5)-CMV-EGFP-CytB-AS-ohneNot]
 gi|56119201|gb|AAV73968.1| beta-lactamase [siRNA vector
           pAAV9(5)-hSyn-DsRed2N1-CytB-AS-ohneNot]
 gi|56119205|gb|AAV73971.1| beta-lactamase [siRNA vector pAAV9(5)-hSyn-DsRed2N1-EGFP-siRNA]
 gi|56406596|gb|AAV87647.1| beta-lactamase [Flexi Vector pF1A T7]
 gi|56406603|gb|AAV87652.1| beta-lactamase [Flexi Vector pFN2A (GST)]
 gi|56406610|gb|AAV87657.1| beta-lactamase [Flexi Vector pF4A (CMV)]
 gi|56541549|dbj|BAD77830.1| beta-lactamase [Expression vector pTD1(TM)]
 gi|56553542|gb|AAV97891.1| bla [Cloning vector pSAT1-EGFP-C1]
 gi|56553544|gb|AAV97892.1| bla [Hygromycin resistance plant expression vector pSAT1-hpt]
 gi|56553547|gb|AAV97894.1| bla [Cloning vector pSAT2-EGFP-C1]
 gi|56553549|gb|AAV97895.1| bla [Cloning vector pSAT3-EGFP-C1]
 gi|56553551|gb|AAV97896.1| bla [Cloning vector pSAT4-EGFP-C1]
 gi|56553553|gb|AAV97897.1| bla [Cloning vector pSAT5-EGFP-C1]
 gi|56553555|gb|AAV97898.1| bla [Cloning vector pSAT6-Citrine-N1]
 gi|56553561|gb|AAV97903.1| bla [Gateway destination plasmid pSAT6-DEST-EGFP-N1]
 gi|56553563|gb|AAV97904.1| bla [Kanamycin resistance plant expression vector pSAT4-nptII]
 gi|56553568|gb|AAV97908.1| bla [Gateway destination plasmid pSAT6-DEST-EGFP-C1]
 gi|56553570|gb|AAV97909.1| bla [Cloning vector pSAT6-DsRed2-N1]
 gi|56553573|gb|AAV97911.1| bla [Cloning vector pSAT6-ECFP-C1]
 gi|56553575|gb|AAV97912.1| bla [Cloning vector pSAT6-DsRed2-C1]
 gi|56553577|gb|AAV97913.1| bla [Phosphinothricin resistance plant expression vector pSAT6-bar]
 gi|56553580|gb|AAV97915.1| bla [Cloning vector pSAT6-EGFP-C1]
 gi|56553582|gb|AAV97916.1| bla [Cloning vector pSAT6-EYFP-N1]
 gi|56553587|gb|AAV97920.1| bla [Gateway destination plasmid pSAT6-NP-DEST-EGFP]
 gi|56553589|gb|AAV97921.1| bla [Cloning vector pSAT6-EYFP-C1]
 gi|56553591|gb|AAV97922.1| bla [Cloning vector pSAT6-ECFP-N1]
 gi|56553594|gb|AAV97924.1| bla [Cloning vector pSAT6-EGFP-N1]
 gi|56553597|gb|AAV97926.1| bla [Cloning vector pSAT6-MCS]
 gi|56553599|gb|AAV97927.1| bla [Cloning vector pSAT7-EGFP-C1]
 gi|56553601|gb|AAV97928.1| bla [Cloning vector pSAT6-Citrine-C1]
 gi|56912127|emb|CAI39221.1| beta-lactamase [Transconjugation plasmid pEMOC2]
 gi|56912130|emb|CAI39223.1| beta-lactamase [Transconjugation plasmid pBMK1]
 gi|57337321|emb|CAH65832.1| beta lactamase [Cloning vector pASK88-huHRS3-VH-EP3/1]
 gi|57790544|gb|AAW56199.1| beta-lactamase [Tetracycline resistance FRT vector pFTC1]
 gi|57790547|gb|AAW56201.1| beta-lactamase [Trimethoprim resistance FRT vector pFTP1]
 gi|57790550|gb|AAW56203.1| beta-lactamase [Cloning vector pUC18T-mini-Tn7T-Gm-REP]
 gi|57790552|gb|AAW56204.1| beta-lactamase [Mini-Tn7 delivery vector pUC18R6KT-mini-Tn7T]
 gi|57864189|emb|CAH59707.1| ampicillin resistance [Cloning vector pFlexible]
 gi|58201867|gb|AAW66983.1| synthetic beta-lactamase [Luciferase reporter vector
           pGL4.14[luc2/Hygro]]
 gi|58201872|gb|AAW66987.1| synthetic beta-lactamase [Luciferase reporter vector
           pGL4.15[luc2P/Hygro]]
 gi|58201876|gb|AAW66990.1| synthetic beta-lactamase [Luciferase reporter vector
           pGL4.16[luc2CP/Hygro]]
 gi|58201880|gb|AAW66993.1| synthetic beta-lactamase [Luciferase reporter vector
           pGL4.76[hRluc/Hygro]]
 gi|58201884|gb|AAW66996.1| synthetic beta-lactamase [Luciferase reporter vector
           pGL4.77[hRlucP/Hygro]]
 gi|58201888|gb|AAW66999.1| synthetic beta-lactamase [Luciferase reporter vector
           pGL4.78[hRlucCP/Hygro]]
 gi|58533133|gb|AAW78922.1| beta-lactamase [Cloning and suicide delivery vector pUC18R6KT]
 gi|58533139|gb|AAW78927.1| beta-lactamase [T7 transposase expression vector pTNS2]
 gi|58533142|gb|AAW78929.1| beta-lactamase [Cloning and Tn7 delivery vector
           pUC18R6K-mini-Tn7T-Km]
 gi|58843568|gb|AAW82912.1| mutant extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|59894878|gb|AAX11248.1| bla [Gene deletion vector pEX100Tlink]
 gi|59894880|gb|AAX11249.1| bla [Gene deletion vector pUCGM-lox]
 gi|60101688|gb|AAX13968.1| beta-lactamase [Dual fluorescent protein cloning vector pGRFP]
 gi|60115916|gb|AAX14066.1| beta-lactamase [Reporter vector pUS23]
 gi|60547283|gb|AAX23611.1| beta-lactamase [Cloning vector pEX18ApGW]
 gi|60651291|gb|AAX31733.1| beta lactamase [Reporter shuttle vector pSUN202]
 gi|60651294|gb|AAX31735.1| beta lactamase [Cloning shuttle vector pSCR202]
 gi|62178046|gb|AAX73186.1| beta-lactamase [Transcriptional fusion vector
           pUC18-mini-Tn7T-Gm-lux]
 gi|62275798|gb|AAX78236.1| beta-lactamase [Flexi Vector pF3A WG (BYDV)]
 gi|62467027|gb|AAX83681.1| beta-lactamase [Expression vector pKLAC1]
 gi|62736901|gb|AAX97735.1| beta-lactamase [Cloning vector pBS 35S Rluc-attR]
 gi|62736906|gb|AAX97739.1| beta-lactamase [Cloning vector pBS 35S YFP-attR]
 gi|62736911|gb|AAX97743.1| beta-lactamase [Cloning vector pBS 35S hRluc-attR]
 gi|62736916|gb|AAX97747.1| beta-lactamase [Cloning vector pBS 35S attR-Rluc]
 gi|62736921|gb|AAX97751.1| beta-lactamase [Cloning vector pBS 35S attR-hRluc]
 gi|62736926|gb|AAX97755.1| beta-lactamase [Cloning vector pBS 35S attR-YFP]
 gi|62945930|gb|AAY22206.1| beta-lactamase [unidentified cloning vector]
 gi|62946660|gb|AAY22441.1| beta-lactamase [Baculovirus expression vector pUltraBac-1]
 gi|63002504|gb|AAY25357.1| Bla [Cloning vector pSAT7-actP-MCS-agsT]
 gi|63002507|gb|AAY25359.1| Bla [Cloning vector pSAT1A-ocsAocsP-bar-ocsT]
 gi|63002510|gb|AAY25361.1| Bla [Cloning vector pSAT1A-ocsAocsP-hpt-ocsT]
 gi|63002512|gb|AAY25362.1| Bla [Cloning vector pSAT1A-ocsAocsP-MCS-ocsT]
 gi|63002515|gb|AAY25364.1| Bla [Cloning vector pSAT1A-ocsAocsP-nptII-ocsT]
 gi|63002517|gb|AAY25365.1| Bla [Cloning vector pSAT1-ocsAocsP-MCS-ocsT]
 gi|63002519|gb|AAY25366.1| Bla [Cloning vector pSAT2A-nosP-MCS-nosT]
 gi|63002521|gb|AAY25367.1| Bla [Cloning vector pSAT2-nosP-MCS-nosT]
 gi|63002523|gb|AAY25368.1| Bla [Cloning vector pSAT3A-masP-MCS-masT]
 gi|63002525|gb|AAY25369.1| Bla [Cloning vector pSAT3-masP-MCS-masT]
 gi|63002527|gb|AAY25370.1| Bla [Cloning vector pSAT4-35SP-MCS-35ST]
 gi|63002529|gb|AAY25371.1| Bla [Cloning vector pSAT4A-35SP-MCS-35ST]
 gi|63002532|gb|AAY25373.1| Bla [Cloning vector pSAT6A-DsRed2-N1]
 gi|63002535|gb|AAY25375.1| Bla [Cloning vector pSAT6A-ECFP-N1]
 gi|63002538|gb|AAY25377.1| Bla [Cloning vector pSAT6A-EGFP-N1]
 gi|63002540|gb|AAY25378.1| Bla [Cloning vector pSAT6A-rbcP-MCS-rbcT]
 gi|63002543|gb|AAY25380.1| Bla [Cloning vector pSAT6A-RFP-N1]
 gi|63002545|gb|AAY25381.1| Bla [Cloning vector pSAT6-rbcP-MCS-rbcT]
 gi|63002548|gb|AAY25383.1| Bla [Cloning vector pSAT6-RFP-C1]
 gi|63002551|gb|AAY25385.1| Bla [Cloning vector pSAT6-RFP-N1]
 gi|63002553|gb|AAY25386.1| Bla [Cloning vector pSAT7A-actP-MCS-agsT]
 gi|66276900|gb|AAY44381.1| AP(R) [Yeast expression vector p426GALL]
 gi|66472065|dbj|BAD98927.1| beta-lactamase [Expression vector pColdTF]
 gi|66473437|gb|AAY46370.1| beta-lactamase [Cloning vector pMAB143]
 gi|66815023|gb|AAY56737.1| beta lactamase [Cloning vector pMBL]
 gi|67089185|gb|AAY66997.1| beta-lactamase [Cloning vector p713-1555]
 gi|70610371|gb|AAZ05447.1| beta-lactamase [Cloning vector pUC19-35S-FLAG-RBS]
 gi|70672666|gb|AAZ06566.1| beta-lactamase [Microarray RNA control template pNIAysic-1]
 gi|70672668|gb|AAZ06567.1| beta-lactamase [Microarray RNA control template pNIAysic-2]
 gi|70672670|gb|AAZ06568.1| beta-lactamase [Microarray spike-in control plasmid pNIAysic-3]
 gi|70672672|gb|AAZ06569.1| beta-lactamase [Microarray spike-in control plasmid pNIAysic-4]
 gi|70672674|gb|AAZ06570.1| beta-lactamase [Microarray spike-in control plasmid pNIAysic-5]
 gi|70672676|gb|AAZ06571.1| beta-lactamase [Microarray spike-in control plasmid pNIAysic-6]
 gi|70672678|gb|AAZ06572.1| beta-lactamase [Microarray spike-in control plasmid pNIAysic-7]
 gi|71493344|gb|AAZ32776.1| beta-lactamase [Apramycin resistance FRT vector pFAP1]
 gi|71493347|gb|AAZ32778.1| beta-lactamase [Zeocin resistance FRT vector pFZE1]
 gi|73672810|gb|AAZ80483.1| beta-lactamase [Cloning vector pUC18R6K-mini-Tn7T-Gm]
 gi|73697469|gb|AAZ81407.1| beta-lactamase [pFN6A (HQ) Flexi Vector]
 gi|73697475|gb|AAZ81411.1| beta-lactamase [pFC7A (HQ) Flexi Vector]
 gi|73697481|gb|AAZ81415.1| beta-lactamase [Cloning vector pFC8A]
 gi|76364281|gb|ABA41655.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.17[luc2/Neo]]
 gi|76364285|gb|ABA41658.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.18[luc2P/Neo]]
 gi|76364289|gb|ABA41661.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.19[luc2CP/Neo]]
 gi|76364293|gb|ABA41664.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.20[luc2/Puro]]
 gi|76364297|gb|ABA41667.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.21[luc2P/Puro]]
 gi|76364301|gb|ABA41670.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.22[luc2CP/Puro]]
 gi|76364305|gb|ABA41673.1| beta-lactamase [Renilla luciferase reporter vector
           pGL4.79[hRluc/Neo]]
 gi|76364309|gb|ABA41676.1| beta-lactamase [Renilla luciferase reporter vector
           pGL4.80[hRlucP/Neo]]
 gi|76364313|gb|ABA41679.1| beta-lactamase [Renilla luciferase reporter vector
           pGL4.81[hRlucCP/Neo]]
 gi|76364317|gb|ABA41682.1| beta-lactamase [Renilla luciferase reporter vector
           pGL4.82[hRluc/Puro]]
 gi|76364321|gb|ABA41685.1| beta-lactamase [Renilla luciferase reporter vector
           pGL4.83[hRlucP/Puro]]
 gi|76364325|gb|ABA41688.1| beta-lactamase [Renilla luciferase reporter vector
           pGL4.84[hRlucCP/Puro]]
 gi|76496268|gb|ABA43651.1| beta-lactamase [Saccharomyces cerevisiae expression vector p426GPD]
 gi|76667909|dbj|BAE45351.1| beta lactamase [Cloning vector p3216PCbeta]
 gi|76799968|gb|ABA55626.1| beta lactamase [synthetic construct]
 gi|77745601|gb|ABB02678.1| bla [Bi-molecular fluorescence complementation vector
           pSAT4-nEYFP-C1]
 gi|77745603|gb|ABB02679.1| bla [Bi-molecular fluorescence complementation vector
           pSAT1-nEYFP-C1]
 gi|77745605|gb|ABB02680.1| bla [Bi-molecular fluorescence complementation vector
           pSAT1-cEYFP-C1-B]
 gi|77745607|gb|ABB02681.1| bla [Bi-molecular fluorescence complementation vector
           pSAT4-cEYFP-C1-B]
 gi|77745609|gb|ABB02682.1| bla [Bi-molecular fluorescence complementation vector
           pSAT1A-cEYFP-N1]
 gi|77745611|gb|ABB02683.1| bla [Bi-molecular fluorescence complementation vector
           pSAT1A-nEYFP-N1]
 gi|77745613|gb|ABB02684.1| bla [Bi-molecular fluorescence complementation vector
           pSAT1-cEYFP-N1]
 gi|77745615|gb|ABB02685.1| bla [Bi-molecular fluorescence complementation vector
           pSAT1-nEYFP-N1]
 gi|77745617|gb|ABB02686.1| bla [Bi-molecular fluorescence complementation vector
           pSAT4A-cEYFP-N1]
 gi|77745619|gb|ABB02687.1| bla [Bi-molecular fluorescence complementation vector
           pSAT4A-nEYFP-N1]
 gi|77745621|gb|ABB02688.1| bla [Bi-molecular fluorescence complementation vector
           pSAT4-cEYFP-N1]
 gi|77745623|gb|ABB02689.1| bla [Bi-molecular fluorescence complementation vector
           pSAT4-nEYFP-N1]
 gi|77819884|gb|ABB04076.1| AmpR [Shuttle vector pMQ51]
 gi|77819890|gb|ABB04081.1| AmpR [Shuttle vector pMQ52]
 gi|77994165|gb|ABB13468.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18R6K-mini-Tn7T-Gm-PlacPflaAgfpmut2]
 gi|77999627|gb|ABB17063.1| beta lactamase [Moss transformation vector pMBL5]
 gi|77999630|gb|ABB17065.1| beta lactamase [Moss transformation vector pMBL6]
 gi|77999633|gb|ABB17067.1| beta lactamase [Moss gene targeting vector pMBL6attR]
 gi|78214571|gb|ABB36476.1| AmpR [Saccharomyces cerevisiae expression vector p423GALL]
 gi|81175361|gb|ABB59018.1| beta-lactamase [Himar1-delivery and mutagenesis vector pFNLTP16 H3]
 gi|81175367|gb|ABB59023.1| Bla [Francisella complementation plasmid pFNLTP23]
 gi|81238110|gb|ABB59938.1| Bla [Expression vector pMF331]
 gi|81238113|gb|ABB59940.1| Bla [Expression vector pMF332]
 gi|81238116|gb|ABB59942.1| Bla [Expression vector pMF334]
 gi|81238198|gb|ABB59949.1| beta-lactamase [Gene trapping Ds/T-DNA vector pUR224NA]
 gi|81238205|gb|ABB59955.1| beta-lactamase [Gene trapping Ds/T-DNA vector pUR224NB]
 gi|81238212|gb|ABB59961.1| beta-lactamase [Gene trapping Ds/T-DNA vector pNU393A1]
 gi|81238219|gb|ABB59967.1| beta-lactamase [Gene trapping Ds/T-DNA vector pNU393B2]
 gi|81238226|gb|ABB59973.1| beta-lactamase [Gene trapping Ds/T-DNA vector pNU435]
 gi|81345495|gb|ABB71437.1| beta-lactamase [Cloning vector pBBR-IBA3plus]
 gi|82548123|gb|ABB82601.1| AmpR [Yeast centromeric expression vector p416GPD]
 gi|82569472|gb|ABB83372.1| AmpR [Expression Vector p413-SSRE]
 gi|82569475|gb|ABB83374.1| AmpR [Expression Vector p413-TR-SSRE]
 gi|82569478|gb|ABB83376.1| AmpR [Expression vector p413-PGAL1]
 gi|82569481|gb|ABB83378.1| AmpR [Expression vector p413-SSRE-GFP]
 gi|82569485|gb|ABB83381.1| AmpR [Expression vector p413-TR-SSRE-GFP]
 gi|82569489|gb|ABB83384.1| AmpR [Quorum Sensing Vector p413-SSRE-AtIPT4]
 gi|82569493|gb|ABB83387.1| AmpR [Quorum Sensing Vector p413-TR-SSRE-AtIPT4]
 gi|82569497|gb|ABB83390.1| AmpR [Quorum Sensing Vector p413-PGAL1-AtIPT4]
 gi|82569502|gb|ABB83394.1| AmpR [Receiver Vector p415-CYC1-CRE1a-SSRE-GFP]
 gi|82569507|gb|ABB83398.1| AmpR [Receiver Vector p415-CYC1-CRE1a-TR-SSRE-GFP]
 gi|82569511|gb|ABB83401.1| AmpR [Expression Vector p415-CYC1-DsRed-Exp]
 gi|82569515|gb|ABB83404.1| AmpR [Expression Vector p415-TEF-DsRed-Exp]
 gi|82569520|gb|ABB83408.1| AmpR [Sender Vector p416-GAL1-AtIPT4]
 gi|83033221|gb|ABB97072.1| beta-lactamase [Mini-Tn7 delivery vector pUC18-mini-Tn7T-Gm-lacZ10]
 gi|83033225|gb|ABB97075.1| beta-lactamase [Mini-Tn7 delivery vector pUC18-mini-Tn7T-Gm-lacZ20]
 gi|83033229|gb|ABB97078.1| beta-lactamase [Mini-Tn7 delivery vector pUC18-mini-Tn7T-Gm-lacZ30]
 gi|83281168|dbj|BAE53670.1| beta-lactamase [Cloning vector pDESTR]
 gi|83779167|gb|ABC47404.1| beta-lactamase [Positive selection cloning vector pJET1]
 gi|85062534|gb|ABC69142.1| beta-lactamase [Cloning vector pHyVec5]
 gi|86278337|gb|ABC88421.1| ampicillin resistance marker [Delivery vector pIEF16S]
 gi|87080787|dbj|BAE79258.1| beta-lactamase [Expression vector pColdI(SP-4)]
 gi|87080790|dbj|BAE79260.1| beta-lactamase [Expression vector pColdII(SP-4)]
 gi|87080793|dbj|BAE79262.1| beta-lactamase [Expression vector pColdIII(SP-4)]
 gi|87080796|dbj|BAE79264.1| beta-lactamase [Expression vector pColdIV(SP-4)]
 gi|87133613|gb|ABD24449.1| Bla [Shuttle expression-secretion vector pP43NMK]
 gi|87159693|dbj|BAE79429.1| beta-lactamase [Cloning vector pPL450]
 gi|87159696|dbj|BAE79431.1| beta-lactamase [Cloning vector pPL451]
 gi|87159699|dbj|BAE79433.1| beta-lactamase [Cloning vector pPL452]
 gi|87159702|dbj|BAE79435.1| beta-lactamase [Cloning vector pCL476]
 gi|87159705|dbj|BAE79437.1| beta-lactamase [Cloning vector pCL478]
 gi|87159708|dbj|BAE79439.1| beta-lactamase [Cloning vector pND706]
 gi|87159711|dbj|BAE79441.1| beta-lactamase [Cloning vector pND707]
 gi|88173989|gb|ABD39138.1| b-lactamase [Cloning vector pBGGT]
 gi|88174978|gb|ABD39513.1| beta-lactamase [Cloning vector pHyVec4]
 gi|88687073|emb|CAJ47404.1| beta-lactamase [synthetic construct]
 gi|89276252|gb|ABD66476.1| beta-lactamase [Cloning vector pFA6a-HBH-kanMX6]
 gi|89276255|gb|ABD66478.1| beta-lactamase [Cloning vector pFA6a-HBH-hphMX4]
 gi|89276258|gb|ABD66480.1| beta-lactamase [Cloning vector pFA6a-HBH-TRP1]
 gi|89276261|gb|ABD66482.1| beta-lactamase [Cloning vector pFA6a-HTB-kanMX6]
 gi|89276264|gb|ABD66484.1| beta-lactamase [Cloning vector pFA6a-HTB-hphMX4]
 gi|89276267|gb|ABD66486.1| beta-lactamase [Cloning vector pFA6a-HTB-TRP1]
 gi|89276270|gb|ABD66488.1| beta-lactamase [Cloning vector pFA6a-BIO-kanMX6]
 gi|89276273|gb|ABD66490.1| beta-lactamase [Cloning vector pFA6a-BIO-hphMX4]
 gi|89276276|gb|ABD66492.1| beta-lactamase [Cloning vector pFA6a-BIO-TRP1]
 gi|89276279|gb|ABD66494.1| beta-lactamase [Cloning vector pFA6a-RGS18H-kanMX6]
 gi|89276282|gb|ABD66496.1| beta-lactamase [Cloning vector pFA6a-RGS18HIS-hphMX4]
 gi|89276285|gb|ABD66498.1| beta-lactamase [Cloning vector pFA6a-RGS18H-TRP1]
 gi|89276287|gb|ABD66499.1| beta-lactamase [Cloning vector pFA6a-kanMX6-PGAL1-HBH]
 gi|89276290|gb|ABD66501.1| beta-lactamase [Cloning vector pFA6a-TRP1-PGAL1-HBH]
 gi|89513615|gb|ABD74634.1| beta lactamase [Functional Analysis plasmid pFA-CaURA3]
 gi|89513618|gb|ABD74636.1| beta lactamase [Functional Analysis plasmid pFA-CaHIS1]
 gi|89513621|gb|ABD74638.1| beta lactamase [Functional Analysis plasmid pFA-CaARG4]
 gi|89513624|gb|ABD74640.1| beta lactamase [Functional Analysis plasmid pFA-CaURA3-MAL2prom]
 gi|89513627|gb|ABD74642.1| beta lactamase [Functional Analysis plasmid pFA-CaHIS1-MAL2prom]
 gi|89513630|gb|ABD74644.1| beta lactamase [Functional Analysis plasmid pFA-CaARG4-MAL2prom]
 gi|89513633|gb|ABD74646.1| beta lactamase [Functional Analysis plasmid pFA-CaURA3-MET3prom]
 gi|89513636|gb|ABD74648.1| beta lactamase [Functional Analysis plasmid pFA-CaHIS1-MET3prom]
 gi|89513639|gb|ABD74650.1| beta lactamase [Functional Analysis plasmid pFA-CaARG4-MET3prom]
 gi|89513642|gb|ABD74652.1| beta lactamase [Functional Analysis plasmid pFA-GFP-CaURA3]
 gi|89513646|gb|ABD74655.1| beta lactamase [Functional Analysis plasmid pFA-GFP-CaHIS1]
 gi|89513648|gb|ABD74656.1| beta lactamase [Functional Analysis plasmid pFA-GFP-CaARG4]
 gi|89513651|gb|ABD74658.1| beta lactamase [Functional Analysis Plasmid pFA-CdHIS1]
 gi|89513654|gb|ABD74660.1| beta lactamase [Functional Analysis Plasmid pFA-CmLEU2]
 gi|89513657|gb|ABD74662.1| beta lactamase [Functional Analysis Plasmid pFA-SAT1]
 gi|89513660|gb|ABD74664.1| beta lactamase [Functional Analysis Plasmid pFA-CdHIS1-MAL2prom]
 gi|89513663|gb|ABD74666.1| beta lactamase [Functional Analysis Plasmid pFA-CmLEU2-MAL2prom]
 gi|89513666|gb|ABD74668.1| beta lactamase [Functional Analysis Plasmid pFA-SAT1-MAL2prom]
 gi|89513669|gb|ABD74670.1| beta lactamase [Functional Analysis Plasmid pFA-CaHIS1-AgTEFprom]
 gi|89513672|gb|ABD74672.1| beta lactamase [Functional Analysis Plasmid pFA-CdHIS-AgTEFprom]
 gi|89513675|gb|ABD74674.1| beta lactamase [Functional Analysis Plasmid pFA-CmLEU2-AgTEFprom]
 gi|89513678|gb|ABD74676.1| beta lactamase [Functional Analysis Plasmid pFA-CdHIS1-MET3prom]
 gi|89513681|gb|ABD74678.1| beta lactamase [Functional Analysis Plasmid pFA-CmLEU2-MET3prom]
 gi|89513684|gb|ABD74680.1| beta lactamase [Functional Analysis Plasmid pFA-SAT1-MET3prom]
 gi|89513687|gb|ABD74682.1| beta lactamase [Functional Analysis Plasmid
           pFA-CaHIS1-MAL2prom-GFP(GA)6]
 gi|89513690|gb|ABD74684.1| beta lactamase [Functional Analysis Plasmid
           pFA-CdHIS-AgTEFprom-GFP(GA)6]
 gi|89513693|gb|ABD74686.1| beta lactamase [Functional Analysis Plasmid pFA-GFP-CdHIS1]
 gi|89513696|gb|ABD74688.1| beta lactamase [Functional Analysis Plasmid pFA-GFP-CmLEU2]
 gi|89513699|gb|ABD74690.1| beta lactamase [Functional Analysis Plasmid
           pFA-CaHIS1-MAL2prom-6x-His-tag]
 gi|90074887|dbj|BAE87123.1| beta-lactamase [Expression vector pUC18VcluxOR]
 gi|90074890|dbj|BAE87125.1| beta-lactamase [Expression vector pUC18VcluxOD]
 gi|91795126|gb|ABE60867.1| beta-lactmase [Conjugative vector pHW001]
 gi|92918408|gb|ABE96682.1| beta-lactamase [shRNA expression vector pSiRPG]
 gi|94470453|gb|ABF20537.1| beta-lactamase [Integration vector pBGSC6]
 gi|94481125|dbj|BAE93935.1| beta-lactamase [Cloning vector pBARST]
 gi|94540633|gb|ABF31012.1| Bla [Delivery vector pIEFBPR]
 gi|94958299|gb|ABF47280.1| beta-lactamase [Microarray spiking control vector pSP64bb1sp1]
 gi|94958301|gb|ABF47281.1| beta-lactamase [Microarray spiking control vector pSP64bb2sp3]
 gi|94958303|gb|ABF47282.1| beta-lactamase [Microarray spiking control vector pSP64bb2sp4]
 gi|94958305|gb|ABF47283.1| beta-lactamase [Microarray spiking control vector pSP64bb2sp5]
 gi|94963142|gb|ABF48729.1| beta-lactamase [TF expression vector pB1H2]
 gi|95102177|gb|ABF51013.1| beta-lactamase [Zea mays]
 gi|104716771|gb|ABF74524.1| beta-lactamase [Cloning vector pUC18T-mini-Tn7T-Tp]
 gi|104716803|gb|ABF74526.1| beta-lactamase [Cloning vector pUC18T-mini-Tn7T-Zeo]
 gi|104716837|gb|ABF74529.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18T-mini-Tn7T-Gm-gfpmut3]
 gi|104716873|gb|ABF74532.1| beta-lactamase [Mini-Tn7 delivery vector pUC18T-mini-Tn7T-Gm-ecfp]
 gi|104716912|gb|ABF74535.1| beta-lactamase [Mini-Tn7 delivery vector pUC18T-mini-Tn7T-Gm-eyfp]
 gi|104716947|gb|ABF74538.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18T-mini-Tn7T-Gm-DsRedExpress]
 gi|104716984|gb|ABF74541.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18T-mini-Tn7T-Tp-gfpmut3]
 gi|104717022|gb|ABF74544.1| beta-lactamase [Mini-Tn7 delivery vector pUC18T-mini-Tn7T-Tp-ecfp]
 gi|104717072|gb|ABF74547.1| beta-lactamase [Mini-Tn7 delivery vector pUC18T-mini-Tn7T-Tp-eyfp]
 gi|104717111|gb|ABF74550.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18T-mini-Tn7T-Tp-DsRedExpress]
 gi|104717160|gb|ABF74553.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18T-mini-Tn7T-Zeo-gfpmut3]
 gi|104717200|gb|ABF74556.1| beta-lactamase [Mini-Tn7 delivery vector pUC18T-mini-Tn7T-Zeo-ecfp]
 gi|104717238|gb|ABF74559.1| beta-lactamase [Mini-Tn7 delivery vector pUC18T-mini-Tn7T-Zeo-eyfp]
 gi|104717278|gb|ABF74562.1| beta-lactamase [Mini-Tn7 delivery vector
           pUC18T-mini-Tn7T-Zeo-DsRedExpress]
 gi|104744459|gb|ABF74575.1| beta-lactamase [Mammalian expression vector pNBio]
 gi|104744494|gb|ABF74578.1| beta-lactamase [Mammalian expression vector pCBio]
 gi|108671047|gb|ABF93442.1| beta-lactamase [Expression vector CS105]
 gi|108671049|gb|ABF93443.1| beta-lactamase [Expression vector CS107]
 gi|108671051|gb|ABF93444.1| beta-lactamase [Expression vector CS108]
 gi|108671053|gb|ABF93445.1| beta-lactamase [Expression vector CS111]
 gi|108741853|gb|ABG01696.1| beta-lactamase [Flexi Vector pFN10A (ACT)]
 gi|108741858|gb|ABG01700.1| beta-lactamase [Flexi Vector pFN11A (BIND)]
 gi|108741862|gb|ABG01703.1| synthetic beta-lactamase [Cloning vector pGL4.31 (luc2P/GAL4
           UAS/Hygro)]
 gi|108947433|gb|ABG24166.1| ampicillin resistance protein [Cloning vector pDNR-Dual]
 gi|109159326|gb|ABG26756.1| beta-lactamase [Cloning vector pPCR-Script Amp SK(+)]
 gi|109290444|gb|ABG29428.1| beta-lactamase [Reporter vector pBNP1]
 gi|109290447|gb|ABG29430.1| ampicillin resistance protein [cloning vector pPlat-Pds-Mod4.1]
 gi|109900617|gb|ABG47803.1| beta-lactamase [Flexi vector pF5A CMV-neo]
 gi|110227284|gb|ABG56582.1| Bla [Shuttle vector pMQ78]
 gi|110227303|gb|ABG56598.1| Bla [Shuttle vector pMQ95]
 gi|110433180|gb|ABG74348.1| beta-lactamase [cloning vector pExpress-1]
 gi|111054491|gb|ABH04321.1| beta-lactamase [Transgenesis vector I-SceI-pBSII-SK+]
 gi|111146844|gb|ABH07370.1| beta-lactamase [Cloning vector pBlueScript-FL]
 gi|112146877|gb|ABI13484.1| beta-lactamase [PCR cloning vector pAnti-Kit-Barnase]
 gi|112789892|gb|ABI21733.1| beta-lactamase [Cloning vector pControl-1]
 gi|113473485|gb|ABI35979.1| beta-lactamase [Cloning vector pYESW29']
 gi|114054348|gb|ABI49757.1| beta-lactamase [CMV hRluc-neo Flexi Vector pF9A]
 gi|114329296|gb|ABI64164.1| Amp [Keratinocyte expression vector phPK14H]
 gi|114386390|gb|ABI74452.1| beta-lactamase [Expression vector pcDNA3-hFIX]
 gi|114846018|gb|ABI82030.1| beta-lactamase [Cloning vector pABC3]
 gi|114846021|gb|ABI82032.1| beta-lactamase [Cloning vector pABC3-His]
 gi|114846024|gb|ABI82034.1| beta-lactamase [Cloning vector pABC3-Cys]
 gi|114846027|gb|ABI82036.1| beta-lactamase [Cloning vector pABC3-HisCys]
 gi|114846318|gb|ABI82038.1| beta-lactamase [Cloning vector pABC3-FlagHis]
 gi|114846322|gb|ABI82041.1| beta-lactamase [Cloning vector pABC3-Gfp]
 gi|114846326|gb|ABI82044.1| beta-lactamase [Cloning vector pABC3-mRfp]
 gi|114846329|gb|ABI82046.1| beta-lactamase [Cloning vector pABC5']
 gi|114846332|gb|ABI82048.1| beta-lactamase [Cloning vector pABC5'-His]
 gi|114846335|gb|ABI82050.1| beta-lactamase [Cloning vector pABC5'-Cys]
 gi|114846640|gb|ABI82052.1| beta-lactamase [Cloning vector pABC5'-HisCys]
 gi|114846643|gb|ABI82054.1| beta-lactamase [Cloning vector pABC5'-FlagHis]
 gi|114846647|gb|ABI82057.1| beta-lactamase [Cloning vector pABC5'-Gfp]
 gi|114846651|gb|ABI82060.1| beta-lactamase [Cloning vector pABC5'-mRfp1]
 gi|114846654|gb|ABI82061.1| beta-lactamase [Cloning vector pGEM-S1]
 gi|114846944|gb|ABI82062.1| beta-lactamase [Cloning vector pGEM-WIZ]
 gi|114848843|gb|ABI82063.1| ampicillin resistance protein [Cloning vector pDRIVE]
 gi|115291316|gb|ABI93158.1| ampicillin resistance protein [Cloning vector pOri1]
 gi|115291322|gb|ABI93163.1| ampicillin resistance protein [Cloning vector pCW]
 gi|115291328|gb|ABI93168.1| ampicillin resistance protein [Cloning vector pCW1]
 gi|115291334|gb|ABI93173.1| ampicillin resistance protein [Cloning vector pCW2]
 gi|115342876|gb|ABI94440.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.23[luc2/minP]]
 gi|115342879|gb|ABI94442.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.24[luc2P/minP]]
 gi|115342882|gb|ABI94444.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.25[luc2CP/minP]]
 gi|115342885|gb|ABI94446.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.26[luc2/minP/Hygro]]
 gi|115342889|gb|ABI94449.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.27[luc2P/minP/Hygro]]
 gi|115342893|gb|ABI94452.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.28[luc2CP/minP/Hygro]]
 gi|115342897|gb|ABI94455.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.29[luc2P/CRE/Hygro]]
 gi|115342901|gb|ABI94458.1| synthetic beta-lactamase [Firefly luciferase reporter vector
           pGL4.30[luc2P/NFAT-RE/Hygro]]
 gi|115600309|gb|ABJ15761.1| beta lactamase [Cloning vector pQLinkHD]
 gi|115600314|gb|ABJ15765.1| beta lactamase [Cloning vector pQLinkGD]
 gi|115600328|gb|ABJ15770.1| beta lactamase [Cloning vector pQLinkH]
 gi|115600333|gb|ABJ15772.1| beta lactamase [Cloning vector pQLinkG]
 gi|116062035|dbj|BAF34650.1| beta-lactamase [HIV-1 vector pNL-DT5R]
 gi|116600909|gb|ABK01324.1| beta-lactamase [knock-in vector pCSR1]
 gi|116600922|gb|ABK01325.1| beta-lactamase [knock-in vector pCSR1::hph]
 gi|117571416|gb|ABK40092.1| beta-lactamase [Mammalian expression vector pF12A RM Flexi]
 gi|117571423|gb|ABK40097.1| beta-lactamase [Inducible protein expression vector pReg Neo]
 gi|117582002|gb|ABK41446.1| bla [YAC construction vector pRML2]
 gi|117939119|dbj|BAF36708.1| ampicillin resistance protein [Expression vector pCXGFP-1]
 gi|117957127|gb|ABK59032.1| ampicillin resistance protein [BAC cloning vector
           P[acman]-ApR-F-2-5]
 gi|117957131|gb|ABK59034.1| ampicillin resistance protein [BAC cloning vector
           attB-P[acman]-ApR-F-2-5-attB]
 gi|118197019|emb|CAL69695.1| beta-lactamase [Acinetobacter baylyi]
 gi|118200846|gb|ABK79305.1| ampicillin resistance [Cloning/transgenesis vector pBS-C5]
 gi|118200848|gb|ABK79306.1| ampicillin resistance [Cloning/transgenesis vector
           pBS-C5_delta_SphI]
 gi|118200857|gb|ABK79310.1| ampicillin resistance [Cloning/transgenesis vector pCaSpeR5]
 gi|119035843|gb|ABL60858.1| ampicillin resistance [Expression vector pCeMM-NTAP(GS)-Gw]
 gi|119035857|gb|ABL60861.1| ampicillin resistance [Expression vector pCeMM-CTAP(SG)-Gw]
 gi|119443897|gb|ABL75294.1| beta-lactamase [Cloning vector pKOS405-159]
 gi|119443901|gb|ABL75297.1| beta-lactamase [Cloning vector pKOS405-156]
 gi|119514753|gb|ABL76153.1| extended spectrum beta-lactamase [Escherichia coli]
 gi|121763168|gb|ABM65099.1| beta-lactamase [Expression vector pUNIV]
 gi|122893027|gb|ABM67531.1| beta-lactamase [Shuttle vector pLvCmvMYOCDHA]
 gi|123979208|gb|ABM81536.1| TEM extended spectrum beta-lactamase [Escherichia coli]
 gi|123979210|gb|ABM81537.1| TEM extended spectrum beta-lactamase [Escherichia coli]
 gi|124015072|gb|ABM88726.1| beta lactamase [Baculovirus expression/transfer vector pFB-LIC-Bse]
 gi|124109224|gb|ABM91081.1| beta lactamase precursor [Cloning vector pQLinkN]
 gi|124109386|gb|ABM91086.1| beta lactamase [Cloning vector pAAV-EF1alpha-hFAH.AOS2]
 gi|124302113|gb|ABN05235.1| beta-lactamase [Yeast tagging vector pFA6a-VN-His3MX6]
 gi|124302116|gb|ABN05237.1| beta-lactamase [Yeast tagging vector pFA6a-VC-His3MX6]
 gi|124302119|gb|ABN05239.1| beta-lactamase [Yeast tagging vector pFA6a-VN-TRP1]
 gi|124302121|gb|ABN05240.1| beta-lactamase [Yeast tagging vector pFA6a-His3MX6-pGAL1-VC]
 gi|124302124|gb|ABN05242.1| beta-lactamase [Yeast tagging vector pFA6a-TRP1-pGAL1-VN]
 gi|124302128|gb|ABN05245.1| beta-lactamase [Yeast tagging vector pFA6a-VC-TRP1]
 gi|124302131|gb|ABN05247.1| beta-lactamase [Yeast tagging vector pFA6a-VN-kanMX6]
 gi|124302134|gb|ABN05249.1| beta-lactamase [Yeast tagging vector pFA6a-VC-kanMX6]
 gi|124302136|gb|ABN05250.1| beta-lactamase [Yeast tagging vector pFA6a-His3MX6-pGAL1-VN]
 gi|124302139|gb|ABN05252.1| beta-lactamase [Yeast tagging vector pFA6a-TRP1-pGAL1-VC]
 gi|124302142|gb|ABN05254.1| beta-lactamase [Yeast tagging vector pFA6a-kanMX6-pGAL1-VN]
 gi|124302145|gb|ABN05256.1| beta-lactamase [Yeast tagging vector pFA6a-kanMX6-pGAL1-VC]
 gi|124302148|gb|ABN05258.1| beta-lactamase [Yeast tagging vector pFA6a-His3MX6-pRPL7B-VN]
 gi|124302151|gb|ABN05260.1| beta-lactamase [Yeast tagging vector pFA6a-His3MX6-pRPL7B-VC]
 gi|124302154|gb|ABN05262.1| beta-lactamase [Yeast tagging vector pFA6a-TRP1-pRPL7B-VN]
 gi|124302157|gb|ABN05264.1| beta-lactamase [Yeast tagging vector pFA6a-TRP1-pRPL7B-VC]
 gi|124302160|gb|ABN05266.1| beta-lactamase [Yeast tagging vector pFA6a-kanMX6-pRPL7B-VN]
 gi|124302163|gb|ABN05268.1| beta-lactamase [Yeast tagging vector pFA6a-kanMX6-pRPL7B-VC]
 gi|124361324|gb|ABN09230.1| beta-lactamase [Cloning vector pLvCmvLacZ.Gfp]
 gi|124361329|gb|ABN09233.1| beta-lactamase [Cloning vector pLvCmvMyocardin.Gfp]
 gi|124365229|gb|ABN09639.1| AmpR [Yeast centromeric expression vector p416CYC]
 gi|124365232|gb|ABN09641.1| AmpR [Yeast centromeric expression vector p416TEF]
 gi|124365834|gb|ABN09912.1| beta-lactamase [Retroviral cloning vector LB-G]
 gi|125743122|gb|ABN54771.1| beta-lactamase [Expression vector pUC19-T7pol-lacI-lys]
 gi|125971757|gb|ABN58900.1| beta-lactamase [Expression vector pETHSUL]
 gi|125971762|gb|ABN58904.1| beta-lactamase [Expression vector pETS2SUL]
 gi|125971768|gb|ABN58909.1| beta-lactamase [Expression vector pASHSUL]
 gi|125971773|gb|ABN58913.1| beta-lactamase [Expression vector pASS2SUL]
 gi|125976352|gb|ABN59502.1| ampicillin resistance protein [Cloning vector pSAT6-DEST-EYFP-C1]
 gi|125976357|gb|ABN59506.1| ampicillin resistance protein [Cloning vector pSAT6-DEST-ECFP-C1]
 gi|125976362|gb|ABN59510.1| ampicillin resistance protein [Cloning vector pSAT6-DEST-RFP-C1]
 gi|125976367|gb|ABN59514.1| ampicillin resistance [Cloning vector pSAT6A-DEST-RFP-N1]
 gi|125976372|gb|ABN59518.1| ampicillin resistance protein [Cloning vector pSAT6A-DEST-ECFP-N1]
 gi|125976377|gb|ABN59522.1| ampicillin resistance protein [Cloning vector pSAT6A-DEST-EGFP-N1]
 gi|125976382|gb|ABN59526.1| ampicillin resistance protein [Cloning vector pSAT6-DEST-RFP-N1]
 gi|125976386|gb|ABN59529.1| Amp [Cloning vector pSAT6-DEST]
 gi|125976390|gb|ABN59532.1| Amp [Cloning vector pSAT6A-DEST]
 gi|125976392|gb|ABN59533.1| ampicillin resistance protein [Cloning vector pSAT6A-MCS]
 gi|126165443|gb|ABN80179.1| beta-lactamase [Expression vector pOPING]
 gi|126165445|gb|ABN80180.1| beta-lactamase [Expression vector pOPINJ]
 gi|126165447|gb|ABN80181.1| beta-lactamase [Expression vector pOPINM]
 gi|126165449|gb|ABN80182.1| beta-lactamase [Expression vector pOPINE]
 gi|126165451|gb|ABN80183.1| beta-lactamase [Expression vector pOPINF]
 gi|126636211|gb|ABO25746.1| beta lactamase precursor [Cloning vector pQTEV2]
 gi|129278853|gb|ABO28856.1| beta-lactamase [Cloning vector pD-Nus1]
 gi|133854399|gb|ABO39208.1| beta-lactamase [Cloning vector pJY-mini-Tn7T-Sm]
 gi|133854409|gb|ABO39211.1| beta-lactamase [Cloning vector pJY-mini-Tn7T-gus-Sm]
 gi|134105592|gb|ABO60940.1| beta-lactamase [Baculovirus expression/transfer vector pFBOH-LIC]
 gi|134285023|gb|ABO69572.1| beta lactamase [pGERM gene disruption vector]
 gi|134307085|gb|ABO72540.1| beta-lactamase [Integrative expression vector pFPN]
 gi|138375568|gb|ABO76906.1| beta-lactamase [Cloning vector GWluc-basic]
 gi|138375583|gb|ABO76909.1| ampicillin resistance protein [Expression vector pCeMM-NTAP(GS)]
 gi|138375597|gb|ABO76912.1| ampicillin resistance protein [Expression vector pCeMM-CTAP(SG)]
 gi|138754326|emb|CAL59731.1| beta-lactamase [Cloning vector pSC101BADgbaA-ISceI(amp)]
 gi|144227900|gb|ABO93510.1| beta-lactamase [Yeast integrative vector pINTyrA]
 gi|144227902|gb|ABO93511.1| beta-lactamase [Yeast integrative vector pINTyrB]
 gi|144227904|gb|ABO93512.1| beta-lactamase [Yeast integrative vector pINTyrC]
 gi|144227907|gb|ABO93514.1| beta-lactamase [Yeast integrative vector pINTyrD]
 gi|145284372|gb|ABP51952.1| beta lactamase [Cloning vector pRPGSM]
 gi|145308248|gb|ABP57387.1| AmpR [Shuttle vector pYESDR196]
 gi|145308254|gb|ABP57392.1| AmpR [Shuttle vector pGWFDR196]
 gi|145308260|gb|ABP57397.1| AmpR [Shuttle vector pFGWDR196]
 gi|145423881|gb|ABP68578.1| beta-lactamase [Yeast tagging vector pFA6a-His3MX6-pCET1-VN]
 gi|145423884|gb|ABP68580.1| beta-lactamase [Yeast tagging vector pFA6a-His3MX6-pCET1-VC]
 gi|145423887|gb|ABP68582.1| beta-lactamase [Yeast tagging vector pFA6a-TRP1-pCET1-VN]
 gi|145423890|gb|ABP68584.1| beta-lactamase [Yeast tagging vector pFA6a-TRP1-pCET1-VC]
 gi|145423893|gb|ABP68586.1| beta-lactamase [Yeast tagging vector pFA6a-kanMX6-pCET1-VN]
 gi|145423896|gb|ABP68588.1| beta-lactamase [Yeast tagging vector pFA6a-kanMX6-pCET1-VC]
 gi|145834039|gb|ABP96790.1| beta-lactamase [Cloning vector pHyVec7]
 gi|145849102|emb|CAM91299.1| beta-lactamase [Cloning vector pBLCAT3T]
 gi|146189494|emb|CAM91222.1| beta lactamase [Cloning vector pZEU]
 gi|146189497|emb|CAM91224.1| bla [Cloning vector pZEL]
 gi|146189500|emb|CAM91226.1| beta lactamase [Cloning vector pZEA]
 gi|146189504|emb|CAM91743.1| beta lactamase [Expression vector pZCRE]
 gi|146189508|emb|CAM91746.1| beta lactamase [Expression vector pZGFP]
 gi|146189511|emb|CAM91748.1| beta lactamase [Cloning vector pZCA]
 gi|146189514|emb|CAM91750.1| beta lactamase [Cloning vector pZCAL]
 gi|146189517|emb|CAM91752.1| beta lactamase [Cloning vector pZCAA]
 gi|146189590|emb|CAM92323.1| beta-lactamase [Cloning vector pBLCAT3T-p1]
 gi|146189593|emb|CAM92325.1| beta-lactamase [Cloning vector pBLCAT3T-p3]
 gi|146189596|emb|CAM92327.1| beta-lactamase [Cloning vector pBLCAT3T-p4]
 gi|146189599|emb|CAM92329.1| beta-lactamase [Cloning vector pBLCAT3T-p5]
 gi|146189602|emb|CAM92331.1| beta-lactamase [Cloning vector pBLCAT3T-NP191]
 gi|146189605|emb|CAM92333.1| beta-lactamase [Cloning vector pBLCAT3T-NP192]
 gi|146272044|emb|CAM91985.1| beta lactamase [Expression vector pCUG6]
 gi|146455413|dbj|BAF62257.1| unnamed protein product [Gene silencing vector pSilent-1]
 gi|146743449|gb|ABQ43173.1| AmpR [Plant transit expression vector pSAT6-EGFP-Ca]
 gi|146743452|gb|ABQ43175.1| AmpR [Plant transit expression vector pSAT6-EGFP-Cb]
 gi|146743455|gb|ABQ43177.1| AmpR [Plant transit expression vector pSAT6-EGFP-Cc]
 gi|146760340|dbj|BAF62422.1| beta-lactamase [PCR template vector pTF101]
 gi|146760343|dbj|BAF62424.1| beta-lactamase [PCR template vector pTF103]
 gi|146760346|dbj|BAF62426.1| beta-lactamase [PCR template vector pTF102]
 gi|146760349|dbj|BAF62428.1| beta-lactamase [PCR template vector pTF104]
 gi|147842915|dbj|BAF62545.1| beta-lactamase [synthetic construct]
 gi|148466472|gb|ABQ65202.1| beta-lactamase [Cloning vector pIPKTA30N]
 gi|149999562|gb|ABR53873.1| beta-lactamase [cloning vector pJET1.2]
 gi|152014022|gb|ABS20113.1| beta-lactamase [Shuttle vector pLvCmvMYOCD2aHA]
 gi|152955956|emb|CAO79589.1| beta-lactamase [Cloning vector pDH51-GW-CFP]
 gi|152955961|emb|CAO79593.1| beta-lactamase [Cloning vector pDH51-GW-YFP]
 gi|152955966|emb|CAO79597.1| beta-lactamase [Cloning vector pDH51-GW-EGFP]
 gi|154814567|gb|ABS87326.1| beta-lactamase [Cloning vector pCPP5249]
 gi|154814571|gb|ABS87329.1| beta-lactamase [Cloning vector pCPP5250]
 gi|154814574|gb|ABS87331.1| Bla [Cloning vector pCPP5209]
 gi|154814578|gb|ABS87334.1| beta-lactamase [Cloning vector pCPP5212]
 gi|154814581|gb|ABS87336.1| Bla [Cloning vector pCPP5242]
 gi|154814585|gb|ABS87339.1| beta-lactamase [Cloning vector pCPP5243]
 gi|154845478|gb|ABS88290.1| beta-lactamase [Cloning vector pELI3.1]
 gi|154918187|gb|ABS88737.1| beta-lactamase [shuttle vector pUCP18-RedS]
 gi|155733548|gb|ABU39918.1| ampicillin resistance protein [Cloning vector pSAT4.35S.RNAi]
 gi|155733550|gb|ABU39919.1| ampicillin resistance protein [cloning vector pSAT3.masP.RNAi]
 gi|155733552|gb|ABU39920.1| ampicillin resistance protein [Cloning vector pSAT6.supP.RNAi]
 gi|155733554|gb|ABU39921.1| ampicillin resistance protein [Cloning vector pSAT6.35S.RNAi]
 gi|155733556|gb|ABU39922.1| ampicillin resistance protein [Cloning vector pSAT6.masP.RNAi]
 gi|155733558|gb|ABU39923.1| ampicillin resistance protein [Cloning vector pSAT6.rbcP.RNAi]
 gi|155733560|gb|ABU39924.1| ampicillin resistance protein [Cloning vector pSAT5.nosP.RNAi]
 gi|156104662|emb|CAO91537.1| beta-lactamase [Cloning vector pDH51-GW-YFPn]
 gi|156104667|emb|CAO91541.1| beta-lactamase [Cloning vector pDH51-GW-YFPc]
 gi|156523807|gb|ABU68996.1| bata-lactamase [Cloning vector pHB168-66]
 gi|156630249|gb|ABU89801.1| ampicillin resistance protein [Cloning vector
           pattP-ampicillin-attP]
 gi|157058856|gb|ABV03162.1| beta lactamase [Cloning vector JSC]
 gi|157064990|gb|ABV04339.1| beta-lactamase [Cloning vector pCM433]
 gi|157091289|gb|ABV21784.1| beta-lactamase [CMV Flexi Vector pFC14A (HaloTag 7)]
 gi|157165876|gb|ABV25014.1| ampicillin resistance protein [Cloning vector pTriplEx2]
 gi|157272165|gb|ABV26714.1| beta-lactamase [Neurospora expression vector pYFP]
 gi|157272167|gb|ABV26715.1| beta-lactamase [Neurospora expression vector pYFPN]
 gi|157272169|gb|ABV26716.1| beta-lactamase [Neurospora expression vector pYFPC]
 gi|157739378|gb|ABV69054.1| beta-lactamase [Cloning vector pAAV-ISceI.AO3]
 gi|158327644|emb|CAO81986.1| beta-lactamase [Reporter vector pCH2B]
 gi|158327648|emb|CAO81989.1| beta-lactamase [Reporter vector pYH2A]
 gi|158343351|gb|ABW35342.1| beta-lactamase [Tn7 transposase expression vector pTNS3]
 gi|158343358|gb|ABW35348.1| beta-lactamase [Kanamycin resistance FRT vector pFKM2]
 gi|158343360|gb|ABW35349.1| beta-lactamase [Kanamycin resistance loxP vector pLKM1]
 gi|158343363|gb|ABW35351.1| beta-lactamase [Zeocin resistance loxP vector pLZE1]
 gi|158343366|gb|ABW35353.1| beta-lactamase [loxP vector pLOX1]
 gi|158343393|gb|ABW35375.1| beta-lactamase [Transposition vector pUC18T-mini-Tn7T-Zeo::loxP]
 gi|158343396|gb|ABW35377.1| beta-lactamase [Transposition vector pUC18T-mini-Tn7T-Km::loxP]
 gi|158426711|gb|ABW38022.1| beta-lactamase [Cloning vector pHyVec11]
 gi|158516880|gb|ABW70116.1| ampicillin resistance protein [Cloning vector pSB156]
 gi|158534338|gb|ABW71927.1| beta-lactamase [Mammalian expression vector pNBioSec]
 gi|158536735|gb|ABW72884.1| beta-lactamase [Expression vector pKLAC2]
 gi|159131950|gb|ABW88016.1| beta-lactamase [Cloning vector pEASY-T1]
 gi|159149198|gb|ABW91162.1| beta lactamase [Transposition Vector MightyMu_ACT]
 gi|159149201|gb|ABW91164.1| beta lactamase [Transposition Vector MightyMu_GUSB]
 gi|159149203|gb|ABW91165.1| beta lactamase [Transposition Vector MightyMu_GUSA]
 gi|159159447|gb|ABW94986.1| beta-lactamase [Transposition vector pUC18T-mini-Tn7T-Km::FRT]
 gi|160688651|gb|ABX45106.1| B-lactamase [Broad host range reporter vector pMJ445]
 gi|160714701|gb|ABX47152.1| beta-lactamase [Cloning vector pVMG-TnpR]
 gi|160714707|gb|ABX47157.1| beta-lactamase [Cloning vector pVMGCRT85]
 gi|160714748|gb|ABX47170.1| beta-lactamase [Yeast tagging vector pFA6a-GFP-KlURA3]
 gi|160714751|gb|ABX47172.1| beta-lactamase [Yeast tagging vector pFA6a-TAP-KlURA3]
 gi|160714754|gb|ABX47174.1| beta-lactamase [Yeast tagging vector pFA6a-GST-KlURA3]
 gi|160714757|gb|ABX47176.1| beta-lactamase [Yeast tagging vector pFA6a-myc-KlURA3]
 gi|160714760|gb|ABX47178.1| beta-lactamase [Yeast tagging vector pFA6a-HA-KlURA3]
 gi|160892423|gb|ABX52090.1| beta-lactamase [FRT source vector pFRT3]
 gi|160892427|gb|ABX52093.1| beta-lactamase [Expression vector pUC18T-mini-Tn7T-LAC-Gm]
 gi|161085612|dbj|BAF93888.1| beta-lactamase [Suicide vector pYMD1]
 gi|161375738|gb|ABX71214.1| AmpR [Cloning vector pXEN]
 gi|161375740|gb|ABX71215.1| AmpR [Cloning vector pXEN-pQ108]
 gi|163929660|dbj|BAF95892.1| beta-lactamase [Cloning vector pHIT88]
 gi|163943733|gb|ABY48989.1| beta-lactamase [CMVd1 Flexi Vector pFC15A (HaloTag 7)]
 gi|163943739|gb|ABY48993.1| beta-lactamase [CMVd2 Flexi Vector pFC16A (HaloTag 7)]
 gi|163943745|gb|ABY48997.1| beta-lactamase [CMVd3 Flexi Vector pFC17A (HaloTag 7)]
 gi|163955600|gb|ABY49798.1| AmpR [Cloning vector pUASpDir]
 gi|164470294|gb|ABY57991.1| beta-lactamase [Cloning vector pWFRT-mer]
 gi|164470299|gb|ABY57995.1| beta-lactamase [Cloning vector pWFRT-tel]
 gi|164470309|gb|ABY58002.1| beta-lactamase [Cloning vector pGFPm-T]
 gi|164499366|gb|ABY59253.1| beta-lactamase [Cloning vector pRL446]
 gi|164600702|gb|ABY61790.1| Bla [FRT-Tp-FRT expression vector pwFRT-PCS12-Tp]
 gi|165909630|gb|ABY73724.1| beta-lactamase [Cloning vector pEX18Ap-pheS]
 gi|165940588|gb|ABY75239.1| beta-lactamase [Yeast tagging vector pFA6a-FLAG-KlURA3]
 gi|165940639|gb|ABY75255.1| beta-lactamase [Cloning vector pUC57-Bt-pheS]
 gi|166163670|gb|ABY83637.1| beta-lactamase [Shuttle vector pZJY41]
 gi|166163674|gb|ABY83640.1| beta-lactamase [Shuttle vector pZJY156]
 gi|167650947|gb|ABZ90952.1| beta-lactamase [Cloning vector pBC542]
 gi|169068002|gb|ACA42566.1| ampicillin resistance protein [Cloning vector pCa4B]
 gi|169068004|gb|ACA42567.1| ampicillin resistance protein [Cloning vector pCa4B2G]
 gi|169068006|gb|ACA42568.1| ampicillin resistance protein [Transformation vector
           pCa4B::UAS-luciferase]
 gi|169068009|gb|ACA42570.1| ampicillin resistance protein [Transformation vector
           pCa4B::UAS-NotchRNAi]
 gi|169068011|gb|ACA42571.1| ampicillin resistance protein [Transformation vector
           pCa4B2G-UAS::luciferase]
 gi|169159123|dbj|BAG12080.1| beta-lactamase [Reporter plasmid pSUR]
 gi|169656100|gb|ACA62827.1| beta-lactamase [synthetic construct]
 gi|169822913|gb|ACA96517.1| beta-lactamase [Expression vector pYB100]
 gi|169881902|gb|ACA96989.1| beta-lactamase [Expression vector pRESQ101]
 gi|169881905|gb|ACA96991.1| beta-lactamase [Expression vector pRESQ70]
 gi|169921145|gb|ACB05483.1| beta-lactamase [BioBrick base vector BBa_I51020]
 gi|169921148|gb|ACB05485.1| beta-lactamase [BioBrick cloning vector pSB4A5-I52002]
 gi|170774033|gb|ACB32236.1| beta-lactamase [Gene silencing vector pJRTCLCrVA.008]
 gi|170774039|gb|ACB32241.1| beta-lactamase [Gene silencing vector pJRTCLCrVA.009]
 gi|171188277|gb|ACB41734.1| beta-lactamase [Shuttle vector pMK4]
 gi|171188285|gb|ACB41741.1| beta-lactamase [Shuttle vector pMK3]
 gi|171193991|gb|ACB45182.1| beta-lactamase [Cloning vector pMQ2]
 gi|171198201|gb|ACB45424.1| beta lactamase [Shuttle vector pUCG18]
 gi|171466749|gb|ACB46535.1| beta-lactamase [CAT-levansucrase counter-selection vector pLOI4162]
 gi|182410404|gb|ACB88209.1| Amp [Chloroplast transformation Vector pTox]
 gi|183013546|gb|ACC38296.1| beta-lactamase [Cloning vector pBGT1]
 gi|183014373|dbj|BAG24285.1| beta-lactamase [Shuttle vector pRS414PTadh]
 gi|183014376|dbj|BAG24287.1| beta-lactamase [Shuttle vector pRS414TPadh]
 gi|183181584|gb|ACC44848.1| synthetic beta-lactamase resistance protein [Firefly luciferase
           reporter vector pGL4.32[luc2P/NFkB-RE/Hygro]]
 gi|186470147|gb|ACC85621.1| beta-lactamase [T7 Flexi Vector pFN18A (HaloTag 7)]
 gi|186470153|gb|ACC85625.1| beta-lactamase [T7 SP6 Flexi Vector pFN19A (HaloTag 7)]
 gi|186470159|gb|ACC85629.1| beta-lactamase [T7 SP6 Flexi Vector pFC20A (HaloTag 7)]
 gi|186702984|gb|ACC91726.1| beta-lactamase [Cloning vector pSB4234]
 gi|186703044|gb|ACC91757.1| ampicillin resistance protein [Cloning vector pWSTK2]
 gi|186703050|gb|ACC91762.1| ampicillin resistance protein [Cloning vector pWSTK3]
 gi|186703060|gb|ACC91770.1| ampicillin resistance protein [Cloning vector pEGFPpA-ACN]
 gi|186703065|gb|ACC91774.1| ampicillin resistance protein [Cloning vector pECFPpA-ACN]
 gi|186703070|gb|ACC91778.1| ampicillin resistance protein [Cloning vector pAP-ACN]
 gi|186703075|gb|ACC91782.1| ampicillin resistance protein [Cloning vector pnlslacZ-ACN]
 gi|186703080|gb|ACC91786.1| ampicillin resistance protein [Cloning vector pEYFPpA-ACN]
 gi|187372914|gb|ACD03182.1| beta-lactamase [Tagging vector pFA6a-KanMX6-P3nmt1-3FLAG]
 gi|187372918|gb|ACD03185.1| beta-lactamase [Tagging vector pFA6a-KanMX6-P41nmt1-3FLAG]
 gi|187372922|gb|ACD03188.1| beta-lactamase [Tagging vector pFA6a-KanMX6-P81nmt1-3FLAG]
 gi|187372926|gb|ACD03191.1| beta-lactamase [Tagging vector pFA6a-his3-P3nmt1-3FLAG]
 gi|187372930|gb|ACD03194.1| beta-lactamase [Tagging vector pFA6a-his3-P41nmt1-3FLAG]
 gi|187372934|gb|ACD03197.1| beta-lactamase [Tagging vector pFA6a-his3-P81nmt1-3FLAG]
 gi|187372940|gb|ACD03202.1| beta-lactamase [Tagging vector pFA6a-5FLAG-kanMX6]
 gi|187372944|gb|ACD03205.1| beta-lactamase [Tagging vector pFA6a-5FLAG-hphMX6]
 gi|187372948|gb|ACD03208.1| beta-lactamase [Tagging vector pFA6a-5FLAG-natMX6]
 gi|187373059|gb|ACD03263.1| beta-lactamase class A [Cloning vector p7Z6]
 gi|187373061|gb|ACD03264.1| PenP [Cloning vector p7S6]
 gi|187710955|gb|ACD14088.1| beta-lactamase [Cloning vector pFY20]
 gi|189038585|gb|ACD75465.1| ampicillin resistance protein [Expression vector pESPBAC]
 gi|189094761|emb|CAQ57440.1| beta lactamase [Trypanosoma brucei brucei]
 gi|190692995|gb|ACE88256.1| beta-lactamase [Expression vector pOPING-ET]
 gi|190692997|gb|ACE88257.1| beta-lactamase [Expression vector pOPINVH]
 gi|190692999|gb|ACE88258.1| beta-lactamase [Expression vector pOPINVL]
 gi|190888542|gb|ACE95897.1| Beta-lactamase [Cloning vector pGloSensor-10F]
 gi|190888545|gb|ACE95899.1| beta-lactamase [Cloning vector pGloSensor-10F[TEV]]
 gi|192757948|gb|ACF04936.1| beta-lactamase [Template plasmid pCLF3]
 gi|192757951|gb|ACF04938.1| beta-lactamase [Template plasmid pCLF4]
 gi|193246596|gb|ACF17165.1| ampicillin resistance protein [Yeast selection vector pIS418]
 gi|193246599|gb|ACF17167.1| ampicillin resistance protein [Yeast selection vector pIS419]
 gi|193246602|gb|ACF17169.1| ampicillin resistance protein [Yeast selection vector pIS420]
 gi|193246605|gb|ACF17171.1| ampicillin resistance protein [Yeast selection vector pIS421]
 gi|193246608|gb|ACF17173.1| ampicillin resistance protein [Yeast selection vector pIS438]
 gi|193299421|gb|ACF17853.1| Bla [Escherichia-Pseudomonas shuttle vector pHERD20T]
 gi|193870784|gb|ACF22982.1| beta-lactamase [CMV Flexi Vector pFN21A (HaloTag 7)]
 gi|193870790|gb|ACF22986.1| beta-lactamase [CMVd1 Flexi Vector pFN22A (HaloTag 7)]
 gi|193870796|gb|ACF22990.1| beta-lactamase [CMVd2 Flexi Vector pFN23A (HaloTag 7)]
 gi|193870802|gb|ACF22994.1| beta-lactamase [CMVd3 Flexi Vector pFN24A (HaloTag 7)]
 gi|194032784|emb|CAQ77012.1| beta-lactamase [Shuttle vector pNEV-E]
 gi|194032787|emb|CAQ77014.1| beta-lactamase [Shuttle vector pNEV-N]
 gi|194473372|emb|CAR31382.1| ampicilin resistance protein [PCR template vector pZC1]
 gi|194473375|emb|CAR31384.1| ampicilin resistance protein [PCR template vector pZC2]
 gi|194473378|emb|CAR31386.1| ampicilin resistance protein [PCR template vector pZC3]
 gi|194473381|emb|CAR31388.1| ampicilin resistance protein [PCR template vector pZC4]
 gi|194473385|emb|CAR31391.1| ampicilin resistance protein [Recombinase expression vector
           pCre-ble]
 gi|194579640|gb|ACF75743.1| beta-lactamase [expression vector pGloSensor-20F cAMP]
 gi|194716694|gb|ACF93190.1| beta-lactamase [Flexi vector pF25A/BR610]
 gi|194716700|gb|ACF93194.1| beta-lactamase [Luciferase ICE T7 Control vector]
 gi|195972363|gb|ACG61340.1| Bla [Expression vector pYAA-ZP-MCS]
 gi|195972447|gb|ACG61351.1| beta-lactamase class A [Expression vector pTSC]
 gi|196475279|gb|ACG76133.1| beta-lactamase [cloning vector pFloxin]
 gi|196475281|gb|ACG76134.1| beta-lactamase [cloning vector pFloxin-IRES]
 gi|196475283|gb|ACG76135.1| beta-lactamase [cloning vector pFloxin-TAP]
 gi|196968520|gb|ACG80831.1| penicillin beta-lactamase [Expression vector pDM310]
 gi|196968527|gb|ACG80837.1| penicillin beta-lactamase [Expression vector pDM359]
 gi|196968534|gb|ACG80843.1| penicillin beta-lactamase [Expression vector pDM360]
 gi|196968541|gb|ACG80849.1| penicillin beta-lactamase [Expression vector pDM309]
 gi|197215835|gb|ACH53165.1| beta-lactamase [Luciferase reporter vector pGL4.50[luc2/CMV/Hygro]]
 gi|197215839|gb|ACH53168.1| beta-lactamase [Firefly luciferase reporter vector
           pGL4.51[luc2/CMV/Neo]]
 gi|197223714|gb|ACH53386.1| beta-lactamase [Tagging vector pFA6a-5FLAG-bleMX6]
 gi|197223716|gb|ACH53387.1| beta-lactamase [Tagging vector pFA6a-natMX6-P3nmt1-3FLAG]
 gi|197223720|gb|ACH53390.1| beta-lactamase [Tagging vector pFA6a-natMX6-P41nmt1-3FLAG]
 gi|197223724|gb|ACH53393.1| beta-lactamase [Tagging vector pFA6a-natMX6-P81nmt1-3FLAG]
 gi|197223728|gb|ACH53396.1| beta-lactamase [Tagging vector pFA6a-hphMX6-P3nmt1-3FLAG]
 gi|197223732|gb|ACH53399.1| beta-lactamase [Tagging vector pFA6a-hphMX6-P41nmt1-3FLAG]
 gi|197223736|gb|ACH53402.1| beta-lactamase [Tagging vector pFA6a-hphMX6-P81nmt1-3FLAG]
 gi|197223740|gb|ACH53405.1| beta-lactamase [Tagging vector pFA6a-bleMX6-P3nmt1-3FLAG]
 gi|197223744|gb|ACH53408.1| beta-lactamase [Tagging vector pFA6a-bleMX6-P41nmt1-3FLAG]
 gi|197223748|gb|ACH53411.1| beta-lactamase [Tagging vector pFA6a-bleMX6-P81nmt1-3FLAG]
 gi|197223752|gb|ACH53414.1| beta-lactamase [Tagging vector pFA6a-kanMX6-Purg1-3FLAG]
 gi|197223756|gb|ACH53417.1| beta-lactamase [Tagging vector pFA6a-natMX6-Purg1-3FLAG]
 gi|197223760|gb|ACH53420.1| beta-lactamase [Tagging vector pFA6a-hphMX6-Purg1-3FLAG]
 gi|197223764|gb|ACH53423.1| beta-lactamase [Tagging vector pFA6a-bleMX6-Purg1-3FLAG]
 gi|197322810|gb|ACH69156.1| ampicillin resistance protein [Shuttle vector pRS415]
 gi|197342845|gb|ACH69349.1| ampicillin resistance protein [Cloning vector pMAK27]
 gi|197693457|gb|ACH71402.1| beta-lactamase [Dicistronic cloning vector pXLJ Con]
 gi|197693461|gb|ACH71405.1| beta-lactamase [Dicistronic cloning vector pXL-Id]
 gi|198078136|gb|ACH81548.1| penicillin beta-lactamase [Expression vector pDM304]
 gi|198078143|gb|ACH81554.1| penicillin beta-lactamase [Expression vector pDM320]
 gi|198078149|gb|ACH81559.1| penicillin beta-lactamase [Expression vector pDM326]
 gi|198078155|gb|ACH81564.1| penicillin beta-lactamase [Expression vector pDM358]
 gi|198078159|gb|ACH81567.1| penicillin beta-lactamase [Cloning vector 1-21]
 gi|198078162|gb|ACH81569.1| penicillin beta-lactamase [Cloning vector pDM313]
 gi|198078165|gb|ACH81571.1| penicillin beta-lactamase [Cloning vector pDM131]
 gi|198078168|gb|ACH81573.1| penicillin beta-lactamase [Cloning vector pDM312]
 gi|198078170|gb|ACH81574.1| penicillin beta-lactamase [Cloning vector pDM229]
 gi|198079172|gb|ACH81575.1| penicillin beta-lactamase [Cloning vector pDM276]
 gi|198079175|gb|ACH81577.1| penicillin beta-lactamase [Cloning vector pDM193]
 gi|198079179|gb|ACH81580.1| penicillin beta-lactamase [Cloning vector pDM347]
 gi|207339213|gb|ACI23597.1| ampicillin resistance protein [Integrating YFP promoter analysis
           vector pJG100]
 gi|209403506|gb|ACI46134.1| beta-lactamase [Expression vector pKLMF-EK]
 gi|209403510|gb|ACI46137.1| beta-lactamase [Expression vector pKLMF-FX]
 gi|209403514|gb|ACI46140.1| beta-lactamase [Expression vector pKLAC1-Gluc]
 gi|209981403|gb|ACJ05374.1| beta-lactamase [Yeast tagging vector pTAPKan1]
 gi|210151264|gb|EEA82272.1| hypothetical protein CLONEX_01829 [Clostridium nexile DSM 1787]
 gi|212717247|gb|ACJ37465.1| beta-lactamase [Cloning vector pmirGLO]
 gi|212725372|gb|ACJ38093.1| penicillin beta-lactamase [Shuttle vector NgoMIV]
 gi|215789972|gb|ACJ70056.1| Bla [Cloning vector pwFRT-GSr]
 gi|217030808|dbj|BAH02681.1| beta-lactamase [Mammalian expression vector pmAlbEPintPlauGH]
 gi|220942110|dbj|BAH11109.1| beta-lactamase [Suicide vector pYMD2]
 gi|220978682|gb|ACL97679.1| beta-lactamase [Expression vector pHF5Ca]
 gi|221229251|gb|ACM09996.1| beta-lactamase [Neurospora expression vector pCCG::C-3xFLAG]
 gi|221229253|gb|ACM09997.1| beta-lactamase [Neurospora expression vector pMF270]
 gi|221229255|gb|ACM09998.1| beta-lactamase [Neurospora expression vector pMF276]
 gi|221229257|gb|ACM09999.1| beta-lactamase [Neurospora expression vector pCCG::C-HAT::FLAG]
 gi|221229259|gb|ACM10000.1| beta-lactamase [Yeast shuttle vector pRS416-10xGly]
 gi|221229261|gb|ACM10001.1| beta-lactamase [Neurospora expression vector pCCG::C-Gly::3xFLAG]
 gi|221229263|gb|ACM10002.1| beta-lactamase [Neurospora expression vector pCCG::C-Gly::GFP]
 gi|221229266|gb|ACM10004.1| beta-lactamase [Neurospora expression vector
           pCCG::C-Gly::HAT::FLAG]
 gi|221229268|gb|ACM10005.1| beta-lactamase [Neurospora expression vector pCCG::N-3xFLAG]
 gi|221229270|gb|ACM10006.1| beta-lactamase [Neurospora expression vector pCCG::N-3xMyc]
 gi|221229272|gb|ACM10007.1| beta-lactamase [Neurospora expression vector pCCG::N-GFP]
 gi|221229275|gb|ACM10009.1| beta-lactamase [Neurospora expression vector pCCG::N-FLAG::HAT]
 gi|221229277|gb|ACM10010.1| beta-lactamase [Neurospora expression vector pN-3xHA]
 gi|221229292|gb|ACM10020.1| beta-lactamase [Neurospora expression vector pCCG::Cre]
 gi|221267808|gb|ACM16585.1| beta-lactamase [Expression vector pHF5Na]
 gi|222446256|emb|CAX28479.1| beta-lactamase [Cloning vector pKF-VH]
 gi|222446258|emb|CAX28480.1| beta-lactamase [Cloning vector pKF-VL]
 gi|222446260|emb|CAX28481.1| beta-lactamase [Cloning vector pKF-SC]
 gi|223019788|dbj|BAH22439.1| beta-lactamase [Mammalian expression vector pmAlbEPintUL23GH]
 gi|223364523|gb|ACM86778.1| beta-lactamase [Cloning vector pEG(KT)]
 gi|223364528|gb|ACM86782.1| beta-lactamase [Cloning vector pEG(KG)]
 gi|224180704|gb|ACN39208.1| ampicillin resistance protein [Expression vector pBac0GW]
 gi|224180709|gb|ACN39212.1| ampicillin resistance protein [Expression vector pBacHGW]
 gi|224180714|gb|ACN39216.1| ampicillin resistance protein [Expression vector pBacAGW]
 gi|224180719|gb|ACN39220.1| ampicillin resistance protein [Expression vector pBacRGW]
 gi|224180724|gb|ACN39224.1| ampicillin resistance protein [Expression vector pBacFGW]
 gi|224180729|gb|ACN39228.1| ampicillin resistance protein [Expression vector pBacYGW]
 gi|224180735|gb|ACN39233.1| ampicillin resistance protein [Expression vector pBacGGWH]
 gi|224812560|gb|ACN64935.1| AmpC [Yeast two-hybrid vector pGADCg]
 gi|224812608|gb|ACN64943.1| amp [Targeting vector pP{white-STAR}]
 gi|224998146|gb|ACN77841.1| beta-lactamase resistance protein [Reporter vector
           pGL4.33[luc2P/SRE/Hygro]]
 gi|224998150|gb|ACN77844.1| beta-lactamase resistance protein [Reporter vector
           pGL4.34[luc2P/SRF-RE/Hygro]]
 gi|224998154|gb|ACN77847.1| beta-lactamase resistance protein [Reporter vector
           pGL4.36[luc2P/MMTV/Hygro]]
 gi|225423175|gb|ACN91080.1| beta-lactamase [Site-specific excision vector pBBR1_FLP2]
 gi|225675559|gb|ACO05020.1| AmpR [Transformation vector pTtag]
 gi|225903559|gb|ACO34942.1| beta-lactamase [P element transformation vector pGX-attP]
 gi|225903562|gb|ACO34944.1| beta-lactamase [P element transformation vector pGE-attB]
 gi|225903565|gb|ACO34946.1| beta-lactamase [P element transformation vector pGE-attB-GMR]
 gi|226320340|gb|ACO48264.1| beta-lactamase [Cloning vector pNIGEL19]
 gi|226331123|gb|ACO48267.1| beta-lactamase [Cloning vector pNIGEL07]
 gi|226331127|gb|ACO48270.1| beta-lactamase [Cloning vector pNIGEL17]
 gi|226331131|gb|ACO48273.1| beta-lactamase [Cloning vector pNIGEL18]
 gi|226331139|gb|ACO48276.1| beta-lactamase [Cloning vector pNIGEL09]
 gi|226331142|gb|ACO48278.1| beta-lactamase [Cloning vector pNIGEL11]
 gi|226331145|gb|ACO48280.1| beta-lactamase [Cloning vector pNIGEL13]
 gi|226331149|gb|ACO48283.1| beta-lactamase [Cloning vector pNIGEL15]
 gi|226331153|gb|ACO48286.1| beta-lactamase [Cloning vector pNIGEL16]
 gi|226442584|dbj|BAH56453.1| beta-lactamase [Shuttle vector pLES003]
 gi|227345087|gb|ACP28054.1| ampicillin resistance protein [Expression vector pCEM2]
 gi|227810166|gb|ACP41232.1| beta-lactamase [Cloning vector pARAn58]
 gi|227810169|gb|ACP41234.1| beta-lactamase [Cloning vector pARAn51]
 gi|228484705|gb|ACQ43933.1| beta-lactamase [cloning vector pHC01]
 gi|228484724|gb|ACQ43948.1| beta-lactamase [cloning vector pHC08]
 gi|228484729|gb|ACQ43952.1| beta-lactamase [cloning vector pHC09]
 gi|228484734|gb|ACQ43956.1| beta-lactamase [cloning vector pHC10]
 gi|237652099|gb|ACR08727.1| beta-lactamase [Transient expression vector pXSN]
 gi|237652102|gb|ACR08729.1| beta-lactamase [Transient expression vector pXUN]
 gi|237652105|gb|ACR08731.1| beta-lactamase [Transient expression vector pXSN-FLAG]
 gi|237652108|gb|ACR08733.1| beta-lactamase [Transient expression vector pXUN-FLAG]
 gi|237652111|gb|ACR08735.1| beta-lactamase [Transient expression vector pXSN-HA]
 gi|237652114|gb|ACR08737.1| beta-lactamase [Transient expression vector pXUN-HA]
 gi|237652117|gb|ACR08739.1| beta-lactamase [Transient expression vector pXSN-Myc]
 gi|237652120|gb|ACR08741.1| beta-lactamase [Transient expression vector pXUN-Myc]
 gi|237652123|gb|ACR08743.1| beta-lactamase [Transient expression vector pX-DG]
 gi|237652126|gb|ACR08745.1| beta-lactamase [Transient expression vector pX-DR]
 gi|237652130|gb|ACR08748.1| beta-lactamase [Transient expression vector pXGUS-P]
 gi|237652134|gb|ACR08751.1| beta-lactamase [Transient expression vector pXGFP-P]
 gi|238556226|gb|ACR44993.1| beta-lactamase [Cloning vector pHC36]
 gi|238556230|gb|ACR44996.1| beta-lactamase [Cloning vector pHC38]
 gi|238556234|gb|ACR44999.1| beta-lactamase [Cloning vector pHC40]
 gi|238556239|gb|ACR45003.1| beta-lactamase [Cloning vector pHC65]
 gi|238556243|gb|ACR45006.1| beta-lactamase [Cloning vector pHC67]
 gi|238556247|gb|ACR45009.1| beta-lactamase [Cloning vector pHC68]
 gi|238556251|gb|ACR45012.1| beta-lactamase [Cloning vector pHC82]
 gi|239583491|gb|ACR82774.1| beta-lactamase [Cloning vector Mini-Tn4001PSpuro]
 gi|239819627|gb|ACS28255.1| beta-lactamase [Expression vector pPM2a]
 gi|242277420|gb|ACS91922.1| ampicillin resistance protein [Baculovirus expression vector pLM]
 gi|242277424|gb|ACS91925.1| ampicillin resistance protein [Baculovirus expression vector
           pLM-ITRs]
 gi|253558923|gb|ACT32140.1| AmpR [Cloning vector pDONRamp]
 gi|254028435|gb|ACT53135.1| beta-lactamase [Cloning vector pGL4.35[luc2P/9XGAL4UAS/Hygro]]
 gi|254028439|gb|ACT53138.1| beta-lactamase [Cloning vector pFN26A (BIND) hRluc-neo]
 gi|254028444|gb|ACT53142.1| beta-lactamase [Cloning vector pBIND-ER (alpha)]
 gi|254028449|gb|ACT53146.1| beta-lactamase [Cloning vector pBIND-GR]
 gi|254995966|dbj|BAH86764.1| beta-lactamase [Mammalian expression vector
           pC[Delta]E-chimUAAgaCAA21FLucH]
 gi|254995971|dbj|BAH86768.1| beta-lactamase [Mammalian expression vector pCInx-hRPSIVCAA21FLuc]
 gi|255687927|gb|ACU29448.1| beta-lactamase [Yeast knockout vector pCloneKan1]
 gi|255687930|gb|ACU29450.1| beta-lactamase [Yeast knockout vector pCloneBle1]
 gi|255710029|gb|ACU30839.1| beta-lactamase [Cloning vector pFloxin-IRES-eGFP]
 gi|256384228|gb|ACU78798.1| beta-lactamase TEM (precursor) [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256385060|gb|ACU79629.1| beta-lactamase TEM (precursor) [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256708578|gb|ACV20891.1| beta-lactamase [Bacillus cereus]
 gi|257218581|gb|ACV50008.1| AmpR [Centromeric vector YCp85]
 gi|257218586|gb|ACV50012.1| AmpR [Centromeric vector YCp80]
 gi|257218589|gb|ACV50014.1| AmpR [Episomal vector YEp85]
 gi|257218592|gb|ACV50016.1| AmpR [Episomal vector YEp80]
 gi|257218596|gb|ACV50019.1| AmpR [Expression vector pTL85]
 gi|257218600|gb|ACV50022.1| AmpR [Expression vector pTL80]
 gi|257359585|gb|ACV53160.1| beta lactamase [Expression vector pETUA]
 gi|257767998|dbj|BAI39423.1| beta-lactamase [Expression vector pTY2b]
 gi|258489392|gb|ACV72605.1| beta-lactamase [Cloning vector pmusmtMCS]
 gi|258617572|gb|ACV83806.1| beta-lactamase [Physcomitrella transformation vector
           pBS108-35SNPT-b]
 gi|258642288|gb|ACV85760.1| beta lactamase [Cloning vector pSpark I]
 gi|258642290|gb|ACV85761.1| beta lactamase [Cloning vector pSpark II]
 gi|258642292|gb|ACV85762.1| beta lactamase [Cloning vector pSpark III]
 gi|258642295|gb|ACV85764.1| beta lactamase [Cloning vector pSpark IV]
 gi|258642297|gb|ACV85765.1| beta lactamase [Cloning vector pSpark V]
 gi|259045722|gb|ACV91304.1| beta-lactamase [Cloning vector pMycoPuro]
 gi|259045726|gb|ACV91307.1| beta-lactamase [Cloning vector Mini-Tn4001PStetM]
 gi|259490930|gb|ACW82463.1| beta-lactamase [Cloning vector pFB1SB3Aek]
 gi|259490933|gb|ACW82465.1| beta-lactamase [Cloning vector pFB1SB3Atev]
 gi|259490936|gb|ACW82467.1| beta-lactamase [Cloning vector pFB1SPepB2Atev]
 gi|259490939|gb|ACW82469.1| beta-lactamase [Cloning vector pFB1SGFPB2Atev]
 gi|260101143|gb|ACX31713.1| beta lactamase [Vector pwFRT-PCS12-bar]
 gi|260505639|gb|ACX42262.1| beta-lactamase [Bacterial selection and production vector pMES4]
 gi|260505740|gb|ACX42312.1| beta-lactamase [Recombineering donor plasmid pDOC-C]
 gi|260505743|gb|ACX42314.1| beta-lactamase [Recombineering donor plasmid pDOC-H]
 gi|260505747|gb|ACX42317.1| beta-lactamase [Recombineering donor plasmid pDOC-F]
 gi|260505751|gb|ACX42320.1| beta-lactamase [Recombineering donor plasmid pDOC-P]
 gi|260505756|gb|ACX42324.1| beta-lactamase [Recombineering donor plasmid pDOC-G]
 gi|260779790|gb|ACX50500.1| beta-lactamase [Self-inactivating lentivirus vector
           pLV.C-EF1a.cyt-bGal.dCpG]
 gi|261865411|gb|ACY01942.1| ampR [HIV whole-genome vector AA1305#18]
 gi|262021248|gb|ACY06903.1| beta-lactamase [Poxvirus recombinant transfer vector pSPV-EGFP]
 gi|262117762|dbj|BAI47854.1| beta-lactamase [Helper vector pRH210]
 gi|262217317|gb|ACY38037.1| beta-lactamase [Expression vector pColdI(tet)]
 gi|262217320|gb|ACY38039.1| beta-lactamase [Expression vector pColdII(tet)]
 gi|262217323|gb|ACY38041.1| beta-lactamase [Expression vector pColdIII(tet)]
 gi|262217326|gb|ACY38043.1| beta-lactamase [Expression vector pColdIV(tet)]
 gi|262217329|gb|ACY38045.1| beta-lactamase [Expression vector pColdX(tet)]
 gi|262217332|gb|ACY38047.1| beta-lactamase [Expression vector pColdTEV(tet)]
 gi|262410748|gb|ACY66810.1| beta-lactamase [Cloning vector pLS975]
 gi|262478126|gb|ACY68261.1| beta-lactamase [Integrative vector pBaSysBioII]
 gi|268327065|dbj|BAI49506.1| beta-lactamase [Shuttle vector pYN401]
 gi|273165291|gb|ACZ97630.1| beta-lactamase [Expression vector pGloSensor-22F cAMP]
 gi|273165320|gb|ACZ97633.1| beta-lactamase [Expression vector pGloSensor-21F cAMP]
 gi|281022115|gb|ADA13290.1| Amp [Cloning vector pMN10]
 gi|282161287|gb|ADA79624.1| ampicillin resistance protein [Escherichia coli]
 gi|282161292|gb|ADA79628.1| ampicillin resistance protein [Escherichia coli]
 gi|282161294|gb|ADA79629.1| ampicillin resistance protein [Escherichia coli]
 gi|282161301|gb|ADA79634.1| ampicillin resistance protein [Escherichia coli]
 gi|282952169|emb|CBG37785.1| beta lactamase [Cloning vector pOtox]
 gi|282952174|emb|CBG37787.1| beta lactamase [Cloning vector pOt-luc]
 gi|283467329|emb|CBI83205.1| beta lactamase [Overexpression vector pTA963]
 gi|283467333|emb|CBI83208.1| beta lactamase [Overexpression vector pTA962]
 gi|283467338|emb|CBI83212.1| beta lactamase [Overexpression vector pTA929]
 gi|283467341|emb|CBI83214.1| beta lactamase [Overexpression vector pTA927]
 gi|283467345|emb|CBI83217.1| beta lactamase [Shuttle vector pTA949]
 gi|283825293|gb|ADB43102.1| beta-lactamase [Rabies virus-derived expression vector cSPBN-4GFP]
 gi|283825297|gb|ADB43105.1| beta-lactamase [Rabies virus-derived expression vector pTIT-N]
 gi|283825300|gb|ADB43107.1| beta-lactamase [Rabies virus-derived expression vector pTIT-P]
 gi|283825303|gb|ADB43109.1| beta-lactamase [Rabies virus-derived expression vector pTIT-G]
 gi|283825306|gb|ADB43111.1| beta-lactamase [Rabies virus-derived expression vector pTIT-L]
 gi|283825309|gb|ADB43113.1| beta-lactamase [Expression vector pCAGGS-T7]
 gi|288187153|gb|ADC42095.1| AmpR [Cloning vector pDuExAc6]
 gi|288191516|gb|ADC44106.1| beta-lactamase [Lentivirus shuttle vector pLV.FLPe.PurR]
 gi|288191519|gb|ADC44108.1| beta-lactamase [Lentivirus shuttle vector pLV.FLPe]
 gi|289629475|gb|ADD13584.1| beta-galactosidase [Cloning vector pdsRNA]
 gi|290563697|gb|ADD38966.1| beta-lactamase [Gene replacement vector pwFRT-PCS12-gat-sacB]
 gi|290791121|gb|ADD63341.1| beta-lactamase [Cloning vector pAE1]
 gi|291192148|gb|ADD83136.1| beta-lactamase [Candida integrating/Saccharomyces episomal vector
           CIp10-2my]
 gi|291192152|gb|ADD83139.1| beta-lactamase [Candida integrating/Saccharomyces episomal vector
           CIp20-2my]
 gi|291192156|gb|ADD83142.1| beta-lactamase [Candida integrating/Saccharomyces episomal vector
           CIp30-2my]
 gi|291361504|gb|ADD98905.1| beta-lactamase precursor [Cloning vector pEF-F3-EGFP-F3-mcs]
 gi|291587253|gb|ADE19328.1| bla [Tri-shuttle cloning vector pmycYACTn]
 gi|291587259|gb|ADE19333.1| bla [Tri-shuttle cloning vector MiniTn-Puro-JCVI-1.7]
 gi|292601744|gb|ADE33911.1| beta-lactamase [Broad host range shuttle vector pPMQAK1]
 gi|293339850|gb|ADE44156.1| beta-lactamase [Cloning vector pZK18S/T]
 gi|293628577|dbj|BAJ04916.1| ampicillin resistance protein [Cloning vector pTip-istAB-sacB]
 gi|294653622|gb|ADF28643.1| ampicillin resistant protein [Cloning vector pBac9-PolhEKA]
 gi|294653640|gb|ADF28652.1| beta-lactamase [Expression vector pCDS-At]
 gi|294847566|gb|ADF43790.1| Bla [cloning vector pAB32]
 gi|294847568|gb|ADF43791.1| Bla [cloning vector pAB34]
 gi|294861860|gb|ADF45589.1| beta-lactamase [Expression vector pYM70]
 gi|295126634|gb|ADF80260.1| beta-lactamase [Cloning vector pPM7g]
 gi|296455346|gb|ADH21581.1| beta-lactamase TEM (precursor) [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|300432110|gb|ADK12946.1| beta lactamase [Fluorescent tagging vector pUC57-Ps12-tag-CFP]
 gi|300432113|gb|ADK12948.1| beta lactamase [Fluorescent tagging vector pUC57-Ps12-turbo-RFP]
 gi|300432116|gb|ADK12950.1| beta lactamase [Fluorescent tagging vector pUC57-PS12-turbo-yfp]
 gi|301341616|gb|ADK73497.1| bla [GFP expression vector pHapII]
 gi|302749841|gb|ADL66929.1| beta-lactamase [Cloning vector pBKS::zeo-ID-hyg]
 gi|304282219|gb|ADM21211.1| beta lactamase [Expression shuttle vector pIMB4]
 gi|304561273|gb|ADM43595.1| AmpR [Cloning vector pSK485]
 gi|305387935|gb|ADM52298.1| beta-lactamase [Cloning vector pZK18S]
 gi|306450677|gb|ADM88583.1| beta-lactamase [Plant binary vector pXNS1pat-Strep]
 gi|306450680|gb|ADM88585.1| beta-lactamase [Plant binary vector pXNS2pat-Strep]
 gi|306450683|gb|ADM88587.1| beta-lactamase [Plant binary vector pXS1pat-Strep]
 gi|306450686|gb|ADM88589.1| beta-lactamase [Plant binary vector pXS2pat-Strep]
 gi|306491147|gb|ADM95142.1| ampicillin resistance determinant [Cloning vector pGFPbglS]
 gi|306491155|gb|ADM95148.1| ampicillin resistance determinant [Cloning vector pYFPbglS]
 gi|306491163|gb|ADM95154.1| ampicillin resistance determinant [Cloning vector pCFPbglS]
 gi|307090022|gb|ADN27524.1| beta-lactamase [HaloTag control vector]
 gi|307639796|gb|ADN83669.1| bla gene-Ap(r) [Wheat transformation vector pghp8.1]
 gi|307639798|gb|ADN83670.1| bla gene-Ap(r) [Wheat transformation vector pGhp-omega/alpha/beta]
 gi|307639800|gb|ADN83671.1| bla gene-Ap(r) [Wheat transformation vector pDhp-omega/alpha/beta]
 gi|307696842|gb|ADN85857.1| beta-lactamase [Phagemid vector pSFMI-lib]
 gi|307696846|gb|ADN85860.1| beta-lactamase [Phagemid vector pSFMI-pro-lib]
 gi|307743214|emb|CBW31011.1| ampicillin resistance protein [Cloning vector for bidirectional
           expression pPMV]
 gi|309274419|gb|ADO63835.1| beta-lactamase [Cloning vector pwFRT-pheS-gat]
 gi|309400218|gb|ADO79535.1| beta-lactamase [Expression vector pSB3941]
 gi|309753681|gb|ADO85844.1| beta-lactamase precursor [cloning vector pEFFS-sigHA]
 gi|311120217|gb|ADP69177.1| beta-lactamase [pGREG expression vector pGREG505-C]
 gi|311120221|gb|ADP69180.1| beta-lactamase [pGREG expression vector pGREG505-G]
 gi|311120225|gb|ADP69183.1| beta-lactamase [pGREG expression vector pGREG505-T]
 gi|312191079|gb|ADQ43425.1| beta-lactamase [Cloning vector pBB-GFP]
 gi|312191082|gb|ADQ43427.1| beta-lactamase [Cloning vector pBB-CmR-ccdB]
 gi|312618308|gb|ADR00306.1| ampicillin resistance protein [Cloning vector pSIM1]
 gi|312618314|gb|ADR00311.1| ampicillin resistance protein [Cloning vector pSIM3]
 gi|313507426|gb|ADR65119.1| beta-lactamase [Reporter vector pFila]
 gi|313649572|gb|EFS13999.1| beta-lactamase family protein [Shigella flexneri 2a str. 2457T]
 gi|313798150|gb|ADR82071.1| beta-lactamase [RNA interference vector pBSK-Gus]
 gi|313798184|gb|ADR82072.1| beta-lactamase [RNA interference vector pBSK-Intron]
 gi|315075635|gb|ADT78589.1| AmpR [piggyBac cloning vector pHomeT-1-R]
 gi|315075641|gb|ADT78594.1| AmpR [piggyBac cloning vector pHomeD-B2-SCE-R]
 gi|315419253|gb|ADU15674.1| beta-lactamase [Yeast tagging vector pFA6a-URA3-kanMX6]
 gi|315435103|gb|ADU18047.1| ampicillin resistance protein [Expression vector pAttR-YFP-2xHA]
 gi|316997256|dbj|BAJ52723.1| ampicillin resistant protein [Yeast expression vector pSU9]
 gi|316997259|dbj|BAJ52725.1| ampicillin resistant protein [Yeast expression vector pSU14]
 gi|317447096|emb|CBX26421.1| beta-lactamase [Binary vector pAMARENA]
 gi|317487577|gb|ADV31343.1| beta-lactamase [Cloning vector pBSk-MP]
 gi|317487579|gb|ADV31344.1| beta-lactamase [Cloning vector pBSk-CP]
 gi|317487581|gb|ADV31345.1| beta-lactamase [Cloning vector pBSk-AC2]
 gi|317487583|gb|ADV31346.1| beta-lactamase [Cloning vector pBSk-BV4]
 gi|317487585|gb|ADV31347.1| beta-lactamase [Cloning vector pBSk-BC4]
 gi|318064866|gb|ADV36643.1| beta-lactamase [RNA interference vector pIBB103]
 gi|318104940|gb|ADV41494.1| beta-lactamase [Cloning vector pNO:luc]
 gi|319759852|gb|ADV71606.1| beta-lactamase [Cloning vector pBAC-FB]
 gi|319759855|gb|ADV71608.1| beta-lactamase [Cloning vector pBAC-FC]
 gi|320019966|gb|ADV94952.1| beta-lactamase TEM [Bacillus subtilis BSn5]
 gi|320090173|gb|ADW08738.1| beta-lactamase [Expression vector pKLCF-n]
 gi|320090176|gb|ADW08740.1| beta-lactamase [Expression vector pKLCF-c]
 gi|322392872|gb|ADW95857.1| beta-lactamase [Gene deletion vector pDGO-01]
 gi|323175358|gb|EFZ60959.1| beta-lactamase family protein [Escherichia coli LT-68]
 gi|323187768|gb|EFZ73067.1| beta-lactamase family protein [Escherichia coli RN587/1]
 gi|323482837|gb|ADX86836.1| beta-lactamase [Expression vector LMP-1]
 gi|325462541|gb|ADZ15151.1| ampiciliin resistance protein [Reporter vector pHonda1]
 gi|325559598|gb|ADZ30882.1| beta-lactamase [MoClo level 1 destination vector pL1F-1]
 gi|325559601|gb|ADZ30884.1| beta-lactamase [MoClo level 1 destination vector pL1R-1]
 gi|325559611|gb|ADZ30892.1| beta-lactamase [MoClo end-linker vector pELE-1]
 gi|325559613|gb|ADZ30893.1| beta-lactamase [MoClo end-linker vector pELB-1]
 gi|325559615|gb|ADZ30894.1| beta-lactamase [MoClo end-linker vector pELR-1]
 gi|325650940|emb|CCA29761.1| ampicillin resistance [Cloning vector pgalK-Kn]
 gi|325656977|gb|ADZ38981.1| beta-lactamase [Transformation and cloning vector pVCC]
 gi|325965629|gb|ADZ46397.1| beta-lactamase [Lux single copy cloning vector pMH31]
 gi|326322094|gb|ADZ54045.1| beta-lactamase [PCR amplification vector pCLF2]
 gi|326322097|gb|ADZ54047.1| beta-lactamase [PCR amplification vector pCLF1]
 gi|326370965|gb|ADZ56697.1| beta lactamase [Baculovirus expression/transfer vector pFB-ZB]
 gi|327176816|gb|AEA29836.1| beta-lactamase [Escherichia-Pseudomonas shuttle vector
           pCon2(3)-Zeo]
 gi|327176818|gb|AEA29837.1| beta-lactamase [Expression vector pCon4]
 gi|327176821|gb|AEA29839.1| beta-lactamase [Expression vector pCon5]
 gi|327176827|gb|AEA29844.1| beta-lactamase [Escherichia-Pseudomonas shuttle vector pCon2(3)]
 gi|327176832|gb|AEA29848.1| beta-lactamase [Escherichia-Pseudomonas shuttle vector
           pCon2(3)-Kan]
 gi|327176834|gb|AEA29849.1| beta-lactamase [Cloning vector pGBT-PX]
 gi|327176837|gb|AEA29851.1| beta-lactamase [Cloning vector pGBT-R14]
 gi|327176840|gb|AEA29853.1| beta-lactamase [Cloning vector pGBT-R15]
 gi|327176843|gb|AEA29855.1| beta-lactamase [Cloning vector pGBT-R16]
 gi|327176846|gb|AEA29857.1| beta-lactamase [Cloning vector pGBT-RP2]
 gi|327176850|gb|AEA29860.1| beta-lactamase [Cloning vector pT3TS-Cre]
 gi|327176853|gb|AEA29862.1| beta-lactamase [Cloning vector pT3TS-Tol2]
 gi|328795282|emb|CBZ41582.1| beta-lactamase [Cloning vector pDBR]
 gi|331687716|gb|AED88255.1| AmpR [Expression vector pMetYC_GW]
 gi|331687733|gb|AED88269.1| AmpR [Expression vector NX32_GW]
 gi|331687738|gb|AED88273.1| AmpR [Expression vector NX33_GW]
 gi|331687743|gb|AED88277.1| AmpR [Expression vector NWTX_GW]
 gi|331687748|gb|AED88281.1| AmpR [Expression vector XNWT_GW]
 gi|332143621|dbj|BAK19611.1| beta lactamase [Gateway vector pUGW55]
 gi|332144393|dbj|BAK19615.1| beta lactamase [Gateway vector pUGW60]
 gi|332144397|dbj|BAK19618.1| beta lactamase [Gateway vector pUGW61]
 gi|332144402|dbj|BAK19622.1| beta lactamase [Gateway vector pGWnY]
 gi|332144406|dbj|BAK19625.1| beta lactamase [Gateway vector pnYGW]
 gi|332144410|dbj|BAK19628.1| beta lactamase [Gateway vector pGWcY]
 gi|332144706|dbj|BAK19514.1| beta lactamase [Gateway vector pUGW0]
 gi|332144710|dbj|BAK19517.1| beta lactamase [Gateway vector pUGW1]
 gi|332144714|dbj|BAK19520.1| beta lactamase [Gateway vector pUGW2]
 gi|332144719|dbj|BAK19524.1| beta lactamase [Gateway vector pUGW3]
 gi|332144724|dbj|BAK19528.1| beta lactamase [Gateway vector pUGW4]
 gi|332144729|dbj|BAK19532.1| beta lactamase [Gateway vector pUGW5]
 gi|332144733|dbj|BAK19535.1| beta lactamase [Gateway vector pUGW6]
 gi|332144737|dbj|BAK19538.1| beta lactamase [Gateway vector pUGW8]
 gi|332144741|dbj|BAK19541.1| beta lactamase [Gateway vector pUGW9]
 gi|332144745|dbj|BAK19544.1| beta lactamase [Gateway vector pUGW11]
 gi|332144749|dbj|BAK19547.1| beta lactamase [Gateway vector pUGW12]
 gi|332144753|dbj|BAK19550.1| beta lactamase [Gateway vector pUGW14]
 gi|332144757|dbj|BAK19553.1| beta lactamase [Gateway vector pUGW15]
 gi|332144761|dbj|BAK19556.1| beta lactamase [Gateway vector pUGW17]
 gi|332144765|dbj|BAK19559.1| beta lactamase [Gateway vector pUGW18]
 gi|332144769|dbj|BAK19562.1| beta lactamase [Gateway vector pUGW20]
 gi|332144773|dbj|BAK19565.1| beta lactamase [Gateway vector pUGW21]
 gi|332144777|dbj|BAK19568.1| beta lactamase [Gateway vector pUGW23]
 gi|332144781|dbj|BAK19571.1| beta lactamase [Gateway vector pUGW24]
 gi|332144785|dbj|BAK19574.1| beta lactamase [Gateway vector pUGW26]
 gi|332144789|dbj|BAK19577.1| beta lactamase [Gateway vector pUGW27]
 gi|332144794|dbj|BAK19581.1| beta lactamase [Gateway vector pUGW33]
 gi|332144799|dbj|BAK19585.1| beta lactamase [Gateway vector pUGW35]
 gi|332144803|dbj|BAK19588.1| beta lactamase [Gateway vector pUGW41]
 gi|332144807|dbj|BAK19591.1| beta lactamase [Gateway vector pUGW42]
 gi|332144811|dbj|BAK19594.1| beta lactamase [Gateway vector pUGW44]
 gi|332144815|dbj|BAK19597.1| beta lactamase [Gateway vector pUGW45]
 gi|332144820|dbj|BAK19601.1| beta lactamase [Gateway vector pUGW51]
 gi|332144824|dbj|BAK19604.1| beta lactamase [Gateway vector pUGW52]
 gi|332144829|dbj|BAK19608.1| beta lactamase [Gateway vector pUGW54]
 gi|332144935|dbj|BAK19631.1| beta lactamase [Gateway vector pcYGW]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|218460577|ref|ZP_03500668.1| putative D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein) [Rhizobium etli Kim 5]
          Length = 219

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTD--- 269
            DG+KTG+T ASGFN+V++   G++ ++ V+LG     +R+   A+LL       +    
Sbjct: 1   MDGIKTGYTNASGFNLVSAVRDGNRRVVGVVLGGRTARSRDAKMAALLDRYLGRASSSGG 60

Query: 270 -RKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDKESH 319
            R   +   K+  +   + +  ++   +   +      +  +  A D    
Sbjct: 61  ARLVASVGAKEAVEVASAADASDVPVPLNAPRPADDLASKSLAYADDAVVP 111


>gi|37575117|gb|AAQ93491.1| class A beta-lactamase TEM-124 [Morganella morganii]
          Length = 285

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 13/163 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDH 49
           ++ F V +     +   P  +  ET                Y  LD N+G ++    P+ 
Sbjct: 3   IKHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEE 62

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V S +   +  L   I  S+N        +       MT+     
Sbjct: 63  RFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCS 122

Query: 110 LLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
             I  S N  A  +  ++   ++   F+ +M +    L     
Sbjct: 123 AAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEP 165


>gi|48734422|gb|AAT46413.1| beta-lactamase TEM-109 [Escherichia coli]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|16798376|gb|AAL29436.1|AF427130_1 inhibitor-resistant beta-lactamase TEM-84 [Escherichia coli]
          Length = 286

 Score = 55.4 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + R++  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 278


>gi|154263799|ref|YP_001409239.1| b-lactamase [Escherichia sp. Sflu5]
 gi|4545267|gb|AAD22468.1|AF121783_2 beta-lactamase [Expression vector pARA13]
 gi|6010636|gb|AAF01199.1|AF179893_1 beta-lactamase [Cloning vector pLM53]
 gi|9022391|gb|AAF82362.1|AF271663_1 beta-lactamase [Cloning vector pLDR9]
 gi|11934666|gb|AAG41769.1|AF187995_1 Bla [Promoter probe vector pJB785TT]
 gi|11934670|gb|AAG41772.1|AF187996_1 Bla [Promoter probe vector pPR9TT]
 gi|13160950|gb|AAK13423.1|AF320510_1 Bla [Promoter probe vector pJB785TTKm1]
 gi|45615|emb|CAA33304.1| unnamed protein product [synthetic construct]
 gi|208142|gb|AAA73059.1| gene bla (Amp-r) [unidentified cloning vector]
 gi|208903|gb|AAA72809.1| beta-lactamase [synthetic construct]
 gi|208989|gb|AAA72356.1| beta-lactamase [unidentified cloning vector]
 gi|209068|gb|AAA72884.1| beta-lactamase [unidentified cloning vector]
 gi|209520|gb|AAA72073.1| beta-lactamase [unidentified cloning vector]
 gi|209527|gb|AAA72077.1| beta-lactamase [unidentified cloning vector]
 gi|1658407|gb|AAB51669.1| beta-lactamase [Cloning vector pJB3]
 gi|2293123|gb|AAB68653.1| beta-lactamase [Cloning vector pJG4-5]
 gi|2343027|gb|AAB67678.1| beta-lactamase [Cloning vector pJB3Cm6]
 gi|2343032|gb|AAB67682.1| beta-lactamase [Cloning vector pJB3Km1]
 gi|2343038|gb|AAB67687.1| beta-lactamase [Cloning vector pJB3Tc20]
 gi|2343043|gb|AAB67691.1| beta-lactamase [Cloning vector pJB321]
 gi|2343049|gb|AAB67696.1| beta-lactamase [Expression vector pJB137]
 gi|2343053|gb|AAB67699.1| beta-lactamase [Expression vector pJB653]
 gi|2576370|gb|AAB82310.1| beta-lactamase [Expression vector pJB655]
 gi|2576374|gb|AAB82313.1| beta-lactamase [Expression vector pJB658]
 gi|2576378|gb|AAB82316.1| beta-lactamase [Expression vector pJB864]
 gi|3320601|gb|AAC83653.1| beta-lactamase [Integrational vector pMUTIN2]
 gi|3892177|gb|AAC78291.1| beta-lactamase [Expression vector pKIL-HIS3]
 gi|4545275|gb|AAD22474.1| beta-lactamase [Expression vector pCY215]
 gi|4585225|gb|AAD25334.1| beta-lactamase [Cloning vector pLM10]
 gi|5326972|emb|CAB46251.1| beta-lactamase [Cloning vector pYanni1]
 gi|5326976|emb|CAB46254.1| beta-lactamase [Cloning vector pYanni2]
 gi|5327021|emb|CAB46257.1| beta-lactamase [Cloning vector pYanni3]
 gi|5327025|emb|CAB46260.1| beta-lactamase [Cloning vector pYanni4]
 gi|5327030|emb|CAB46264.1| beta-lactamase [Cloning vector pYanni5]
 gi|6009636|dbj|BAA85000.1| beta-lactamase [Expression vector pLED-HB]
 gi|6457352|gb|AAF09489.1| beta lactamase [Cloning vector pBgal]
 gi|7649701|dbj|BAA94846.1| beta-lactamase [Retroviral vector pCXbsr]
 gi|7649704|dbj|BAA94848.1| beta-lactamase [Retroviral vector pCXneo]
 gi|9587162|gb|AAF89181.1| beta-lactamase [Cloning vector pBIND]
 gi|10945111|emb|CAC14210.1| beta-lactamase [synthetic construct]
 gi|13623802|dbj|BAB41066.1| beta-lactamhydrolase [Expression vector pLEAD4]
 gi|13623805|dbj|BAB41068.1| beta-lactamhydrolase [Expression vector pLEAD5]
 gi|15149222|gb|AAK85196.1| beta-lactamase [Expression vector pBGH]
 gi|19572270|emb|CAD27361.1| beta-lactamase [Cloning vector pHK11-bla]
 gi|26449190|dbj|BAC41723.1| beta-lactamase [Retroviral vector pCX4bsr]
 gi|26449193|dbj|BAC41725.1| beta-lactamase [Retroviral vector pCX4neo]
 gi|26449196|dbj|BAC41727.1| beta-lactamase [Retroviral vector pCX4pur]
 gi|26449199|dbj|BAC41729.1| beta-lactamase [Retroviral vector pCX4hyg]
 gi|26449202|dbj|BAC41731.1| beta-lactamase [Retroviral vector pCX4bleo]
 gi|26449205|dbj|BAC41733.1| beta-lactamase [Retroviral vector pCX4.1hisD]
 gi|28849078|gb|AAO47697.1| b-lactamase [expression vector pT7-5]
 gi|31745706|gb|AAP57186.1| beta-lactamase [Cosmid vector pRR54]
 gi|37929973|gb|AAP74485.1| Bla [Cloning vector pKZ14]
 gi|37929984|gb|AAP74487.1| Bla [Cloning vector pKZ20]
 gi|37930023|gb|AAP74495.1| Bla [Cloning vector pLZ42]
 gi|41584264|gb|AAS09822.1| beta-lactamase [Cloning vector P-element_XP]
 gi|45826068|gb|AAS77678.1| Bla beta lactamase [Shuttle vector pELS100]
 gi|60396876|gb|AAX19662.1| beta lactamase [Expression vector pT7RS]
 gi|74231242|gb|ABA00718.1| beta-lactamase [Expression vector pBAD322]
 gi|84782118|gb|ABC61530.1| Bla [VEEV replicon vector YFV-C2]
 gi|84782121|gb|ABC61532.1| Bla [VEEV replicon vector YFV-C1]
 gi|84782124|gb|ABC61534.1| Bla [VEEV replicon vector YFV-C2]
 gi|84782127|gb|ABC61536.1| Bla [VEEV replicon vector YFV-C2opt]
 gi|84782130|gb|ABC61538.1| Bla [VEEV replicon vector YFV-C3opt-NS2mut]
 gi|84782133|gb|ABC61540.1| Bla [VEEV replicon vector YFV-C2opt-NS2mut]
 gi|84782136|gb|ABC61542.1| Bla [VEEV replicon vector YFV-C3opt]
 gi|117581999|gb|ABK41444.1| bla [YAC construction vector pRML1]
 gi|118200855|gb|ABK79309.1| ampicillin resistance [Cloning/transgenesis vector pUAST-C5]
 gi|129560437|dbj|BAF48774.1| beta-lactamase [Retroviral vector pCX4gfp*]
 gi|129560440|dbj|BAF48776.1| beta-lactamase [Retroviral vector pCX4redEX*]
 gi|148578111|emb|CAN86931.1| b-lactamase [Escherichia sp. Sflu5]
 gi|158348100|gb|ABW37356.1| beta-lactamase [Cloning vector pEZY45]
 gi|163955598|gb|ABY49797.1| AmpR [Cloning vector pWIZdir]
 gi|169639577|gb|ACA60873.1| beta-lactamase [phagemid cloning vector pA2]
 gi|172053655|gb|ACB70964.1| bla [Cloning vector L071 RRI-Green]
 gi|172053658|gb|ACB70966.1| bla [Cloning vector L087 RRI-Red]
 gi|207091330|gb|ACI23256.1| beta-lactamase [Retroviral expression vector L149]
 gi|270064175|gb|ACZ60056.1| beta-lactamase [shuttle vector pTET15]
 gi|312274862|gb|ADQ57462.1| beta-lactamase [Shuttle vector pKM244]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|7595231|gb|AAF64386.1|AF132290_1 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|195976047|gb|ACG63555.1| beta-lactamase SHV-18 [Acinetobacter baumannii]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGSVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AAKRGARGIVALLGPNNKAER 253


>gi|82592679|gb|ABB84515.1| extended-spectrum beta-lactamase TEM-147 [Pseudomonas aeruginosa]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +V         K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSVLPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|166078564|gb|ABY81260.1| beta-lactamase [Escherichia coli]
 gi|166078572|gb|ABY81264.1| beta-lactamase [Escherichia coli]
          Length = 272

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|166078560|gb|ABY81258.1| beta-lactamase [Escherichia coli]
 gi|218175575|gb|ACK75718.1| beta-lactamase TEM-1 [Escherichia coli]
          Length = 276

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|166078558|gb|ABY81257.1| beta-lactamase [Escherichia coli]
          Length = 272

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|166078554|gb|ABY81255.1| beta-lactamase [Escherichia coli]
          Length = 273

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|166078552|gb|ABY81254.1| beta-lactamase [Escherichia coli]
 gi|166078556|gb|ABY81256.1| beta-lactamase [Escherichia coli]
 gi|166078562|gb|ABY81259.1| beta-lactamase [Escherichia coli]
 gi|166078566|gb|ABY81261.1| beta-lactamase [Escherichia coli]
 gi|166078568|gb|ABY81262.1| beta-lactamase [Escherichia coli]
 gi|166078570|gb|ABY81263.1| beta-lactamase [Escherichia coli]
 gi|166078574|gb|ABY81265.1| beta-lactamase [Escherichia coli]
 gi|166078584|gb|ABY81270.1| beta-lactamase [Escherichia coli]
          Length = 271

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|166078550|gb|ABY81253.1| beta-lactamase [Escherichia coli]
 gi|166078580|gb|ABY81268.1| beta-lactamase [Escherichia coli]
 gi|166078590|gb|ABY81273.1| beta-lactamase [Escherichia coli]
          Length = 274

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|112785106|gb|ABI20743.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|58200709|gb|AAW66604.1| beta-lactamase TEM-11 [Proteus mirabilis]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|1045659|gb|AAC32891.1| beta-lactamase TEM-28 [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|3328184|gb|AAC73065.1| beta lactamase precursor [Cloning vector pQE30NST]
 gi|13488584|gb|AAK26193.1| beta-lactamase [Cloning vector pQStrep2]
 gi|34421984|gb|AAQ68222.1| beta-lactamase [Expression vector pPANK]
 gi|37223185|gb|AAQ90186.1| beta lactamase precursor [Cloning vector pQE-30NAST-attB]
 gi|37575402|gb|AAQ93653.1| beta-lactamase [Expression vector pAT222]
 gi|37575407|gb|AAQ93657.1| beta-lactamase [Expression vector pAT223]
 gi|37575411|gb|AAQ93660.1| beta-lactamase [Expression vector pAT224]
 gi|37575415|gb|AAQ93663.1| beta-lactamase [Expression vector pQEMBP]
 gi|37575419|gb|AAQ93666.1| beta-lactamase [Expression vector pAT194]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     +   ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQAAMDERNRQIAEIG 279


>gi|3281932|emb|CAA76796.1| beta-lactamase class A [Escherichia coli]
 gi|14588995|emb|CAC43180.1| TEM-29 ES-beta-lactamase [Escherichia coli]
 gi|82468437|gb|ABB76656.1| extended-spectrum beta-lactamase TEM-29 [Pseudomonas aeruginosa]
          Length = 286

 Score = 55.0 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|183584860|gb|ACC63898.1| beta-lactamase TEM-166 [synthetic construct]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILEGFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|16331861|ref|NP_442589.1| hypothetical protein slr0121 [Synechocystis sp. PCC 6803]
 gi|1001780|dbj|BAA10659.1| slr0121 [Synechocystis sp. PCC 6803]
          Length = 495

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 72/241 (29%), Gaps = 8/241 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            S A       Y  +D + G        +     AS  K+  A   F  + + K  L   
Sbjct: 222 TSKAPAINSYSYF-IDVDNGQFANAK-GETQLPAASTIKIPVAIAFFEAVDQGKIQLHEE 279

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + ++++          +  G   +        +V     I+   A ++        + +N
Sbjct: 280 LPLTQDVIVGEAGTMQYDVGKRSSYPAL---EVVTKMIVISDNTATNMLIKRLGGKEFLN 336

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
              +   +  T   N    ++  + T+ +D+A+L  +++      +         ++  K
Sbjct: 337 QRFQAWQMPQTKINNYLPDLEGTNTTSPQDLALLLVKLQGGELLSLKSRDRLLGIMQQTK 396

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
                            KTG       +     +   +  +  +L        N V+  L
Sbjct: 397 TRTLLPQGLEPDAQIAHKTGDIGTVLGDAGIVDMPNGKRYVGAVL---ATRPHNDVAGRL 453

Query: 260 L 260
           L
Sbjct: 454 L 454


>gi|239617263|ref|YP_002940585.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Kosmotoga olearia TBF 19.5.1]
 gi|239506094|gb|ACR79581.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Kosmotoga olearia TBF 19.5.1]
          Length = 380

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT---LLDTNTGHVIAENYPDHPWNPASLT 57
          M++ + +I + + ++IF        +    +    + D  TG +I +      + PAS+T
Sbjct: 1  MKKVIFLIFILLTTSIFGDTVRELVDNFDGFVGIYVEDIETGEIITQYNATKLFTPASVT 60

Query: 58 KLMTAYVVFSF 68
          KL T       
Sbjct: 61 KLFTLLAALEN 71


>gi|40317280|gb|AAR84298.1| TEM-132 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|58430778|dbj|BAD89186.1| TEM-derived extended-spectrum beta-lactamase [Klebsiella
           pneumoniae]
 gi|58430780|dbj|BAD89187.1| TEM-derived extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAVPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|208657245|gb|ACI29961.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|208657247|gb|ACI29962.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|208657249|gb|ACI29963.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|208657251|gb|ACI29964.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|208657253|gb|ACI29965.1| TEM-1 beta-lactamase [Escherichia coli]
          Length = 267

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 72/254 (28%), Gaps = 14/254 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 184

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 185 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 244

Query: 231 SAIQGDQS-LIAVI 243
           +     +   I VI
Sbjct: 245 ALGPDGKPSRIVVI 258


>gi|166078586|gb|ABY81271.1| beta-lactamase [Escherichia coli]
          Length = 264

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 72/254 (28%), Gaps = 14/254 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI 243
           +     +   I VI
Sbjct: 246 ALGPDGKPSRIVVI 259


>gi|166078578|gb|ABY81267.1| beta-lactamase [Escherichia coli]
 gi|166078582|gb|ABY81269.1| beta-lactamase [Escherichia coli]
          Length = 268

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 72/254 (28%), Gaps = 14/254 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI 243
           +     +   I VI
Sbjct: 246 ALGPDGKPSRIVVI 259


>gi|40737710|gb|AAR89358.1| beta-lactamase TEM-127 [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDNVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|71273528|emb|CAJ13634.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|166078588|gb|ABY81272.1| beta-lactamase [Escherichia coli]
          Length = 269

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 72/254 (28%), Gaps = 14/254 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI 243
           +     +   I VI
Sbjct: 246 ALGPDGKPSRIVVI 259


>gi|21388252|emb|CAC85661.1| TEM-94 ES-beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 84/273 (30%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
           +     +   ++ + + G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYMTGSQATMDERNRQIAEI 278


>gi|14164988|gb|AAK55329.1|AF361302_15 inactive beta-lactamase [Cloning vector pALTER(R)*-MAX]
 gi|595993|gb|AAA56769.1| truncated beta-lactamase gene with a 4bp deletion, repaired by
           mutagenesis with oligo GTTGCCATTGCTGCAGGCATCGTGGTG
           (nucleotides 4573-4595) restoring ampicillin resistance
           and PstI site by 4 bp insertion [Cloning vector pSIT]
 gi|1197550|gb|AAB39959.1| inactive beta-lactamase [Cloning vector pALTER-Ex1]
          Length = 190

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 55/185 (29%), Gaps = 13/185 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPQWQQ 185

Query: 171 AILSW 175
              ++
Sbjct: 186 RCANY 190


>gi|74054890|gb|AAZ95766.1| putative TEM beta lactamase [bacterium RRLBTTh23]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 78/273 (28%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+      RN+  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMEERNRQIAEI 278


>gi|146260180|gb|ABQ14420.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 80/271 (29%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     ++  P L+  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAASCLPVLAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N     P  +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYPPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|112785110|gb|ABI20745.1| TEM extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEEHFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|166157194|emb|CAJ66089.1| beta-lactamase TEM-150 [Escherichia coli]
 gi|208970779|gb|ACI32331.1| extended spectrum beta lactamase TEM-150 [Escherichia coli]
 gi|208970781|gb|ACI32332.1| extended spectrum beta lactamase TEM-150 [Klebsiella pneumoniae]
 gi|208970783|gb|ACI32333.1| extended spectrum beta lactamase TEM-150 [Enterobacter sp.
           SP040079]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  +T                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPDTLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260151|gb|ABQ14408.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDMVEYSPVTEKHLTDGMTVRGLCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAEPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|146260134|gb|ABQ14405.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 78/273 (28%), Gaps = 18/273 (6%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L            +    H TT       
Sbjct: 121 DNAAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNE--AIPNDEHDTTMPVAMAT 178

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCASGFNIVAS 231
           + R            + + ++                        K+G        I+A+
Sbjct: 179 TLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAA 238

Query: 232 AIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                +   I VI     + T ++ +  +  +G
Sbjct: 239 LGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|114386382|gb|ABI74447.1| beta lactamase TEM-152 [Escherichia coli]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 72/262 (27%), Gaps = 25/262 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G           
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSG----------- 234

Query: 231 SAIQGDQSLIAVILGALDRNTR 252
            A +     I   LG   + +R
Sbjct: 235 -AGKRGSRGIIAALGPDGKPSR 255


>gi|20805894|gb|AAM28884.1|AF506748_1 TEM beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|42525360|gb|AAS18375.1| beta lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 286

 Score = 55.0 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++      S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAELSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   + ++        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTSELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ S  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERSRQIAEIG 279


>gi|325518516|gb|EGC98206.1| D-alanyl-D-alanine endopeptidase [Burkholderia sp. TJI49]
          Length = 206

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 5/161 (3%)

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           +   + ++ S N  A A++         FV+ MN  ++ LG+  THF    G+    + +
Sbjct: 41  DMFHIALMSSENRAAAALSRDYPGGRTAFVKAMNREARRLGMRHTHFREPTGL-SPHNVS 99

Query: 166 TARDMAILSWRIKTDFPQYM----HYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
           TA D+A L      D             ++  + +     +        L     KTGF 
Sbjct: 100 TAEDLARLVGAAAQDPLIRYFSTDTSTTVRPGDGELLYVNSDPLVRYRRLPIRLQKTGFI 159

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSM 262
             SG  +V       +    V+LGA  R   +  +  +   
Sbjct: 160 NESGHGVVMRMRVKGRRTTVVLLGAPTRAGVSSDAIKIHRW 200


>gi|227462936|gb|ACP18864.1| TEM beta-lactamase [Salmonella enterica subsp. enterica serovar
           Infantis]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRGEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260138|gb|ABQ14407.1| beta-lactamase [uncultured soil bacterium]
          Length = 269

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 73/262 (27%), Gaps = 14/262 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILGSFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHCSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLTSRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNK 254
              +   I VI     + T ++
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDE 262


>gi|208244|gb|AAA72841.1| b-lactamase [unidentified cloning vector]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWLEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|331687722|gb|AED88260.1| AmpR [Expression vector XN22_GW]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPXAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|1003002|gb|AAA77064.1| beta-lactamase [Cloning vector pRSQ]
 gi|1546042|gb|AAB16840.1| beta-lactamase [Cloning vector pRSQ2-LEU2]
 gi|1546047|gb|AAB16844.1| beta-lactamase [Cloning vector pRSQ2-URA3]
 gi|2801668|gb|AAC40223.1| beta-lactamase [Cloning vector yGALset986]
 gi|6642842|gb|AAF20319.1| beta-lactamase [Yeast two-hybrid vector pCD.1]
 gi|6642845|gb|AAF20321.1| beta-lactamase [Yeast two-hybrid vector pCD.2]
 gi|6642849|gb|AAF20324.1| beta-lactamase [Yeast two-hybrid vector pC-ACT.1]
 gi|6642853|gb|AAF20327.1| beta-lactamase [Yeast two-hybrid vector pC-ACT.2]
 gi|37812662|gb|AAR04149.1| beta lactamase [UAS-less reporter vector pMELalpha]
 gi|37812675|gb|AAR04158.1| beta lactamase [UAS-less reporter vector pMELalpha2]
 gi|38327509|gb|AAR17786.1| beta-lactamase [Cloning vector pPGA89]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F  +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFFHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|15081590|gb|AAK82652.1| beta-lactamase TEM-102 [Plasmid pWW100]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P     ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFVRPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 AVGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|8272638|gb|AAF74292.1|AF264753_1 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 277

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 76/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|2118167|pir||S60312 extended spectrum beta-lactamase CAZ-7 - Klebsiella pneumoniae
 gi|296956|emb|CAA46346.1| extended spectrum beta-lactamase CAZ-7 [Klebsiella pneumoniae]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|41817|emb|CAA41038.1| beta lactamase TEM6 [Escherichia coli]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|116282558|gb|ABJ97318.1| beta-lactamase [Expression vector pAct26mCherry-F]
 gi|116282561|gb|ABJ97320.1| beta-lactamase [Expression vector pAct26mRFP-F]
 gi|116282565|gb|ABJ97323.1| beta-lactamase [Expression vector pAct26IFN]
 gi|116282569|gb|ABJ97326.1| beta-lactamase [Expression vector pAct26CRFB1]
 gi|116282573|gb|ABJ97329.1| beta-lactamase [Expression vector pAct26CRFB5]
 gi|116282577|gb|ABJ97332.1| beta-lactamase [Expression vector pAct26CRFB6]
 gi|298209298|gb|ADI62667.1| beta-lactamase [Cloning vector Crypto RNAi HP-Frame]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F  +M +    L         A    +          
Sbjct: 126 SMSDNTAANLLLTTIGGPKELTAFFHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|313586335|gb|ADR71220.1| TEM-183 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWLIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260209|gb|ABQ14432.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPHLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|114386384|gb|ABI74448.1| beta lactamase TEM-151 [Escherichia coli]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + R++  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 278


>gi|146260186|gb|ABQ14423.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 80/267 (29%), Gaps = 7/267 (2%)

Query: 4   FLVIIAMAMLS---NIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           F     + +L+    +       +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 5   FFAAFCLPVLAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N     P  +       MT+       I  S N  
Sbjct: 65  LLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYPPVTEKHLTDGMTVRELCSAAITMSDNTA 124

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M + +  L         A    +            L   +
Sbjct: 125 ANLLLTTIGGPKELTAFLHNMGDHATRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 185 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 244

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 245 PSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|163311075|pdb|3BFE|A Chain A, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
           Citrobacter Sedlakii
 gi|163311076|pdb|3BFE|B Chain B, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
           Citrobacter Sedlakii
 gi|163311077|pdb|3BFE|C Chain C, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
           Citrobacter Sedlakii
 gi|163311078|pdb|3BFE|D Chain D, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
           Citrobacter Sedlakii
          Length = 262

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 11/237 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   V+     D  +   S +K+MTA  V    +    +L   +TI K         + 
Sbjct: 27  ADNSQVLY--RADERFAMCSTSKVMTAAAVLKQSETHDGILQQKMTIKKADLTNWNPVTE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFM 153
              G+TMTL       +  S N     +            F + + +T+  L        
Sbjct: 85  KYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGPGNVTAFARSIGDTTFRLDRKEPELN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    +       L      D        Q+            +  A       
Sbjct: 145 TAIPGDERDTTSPLAMAKSLRKLTLGDALAGPQRAQLVDWLKGNTTGGQSIRAGLPAHWV 204

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
            G KTG       N +A     D+  L+ V         A  R      +A +++ G
Sbjct: 205 VGDKTGAGDYGTTNDIAVIWPEDRAPLVLVTYFTQPQQDAKWRKDVLAAAAKIVTEG 261


>gi|13562035|gb|AAK30619.1|AF351241_1 TEM-90 beta-lactamase [Escherichia coli]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTGGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260199|gb|ABQ14428.1| beta-lactamase [uncultured soil bacterium]
          Length = 271

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPASWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|16973670|gb|AAL32364.1|AF399742_1 beta-lactamase [Cloning vector pSMART]
 gi|20301817|gb|AAM15720.1| beta-lactamase [cloning vector pSMART-LC]
 gi|22476926|gb|AAM97351.1| beta-lactamase [Cloning vector pEZSeq-Amp]
 gi|69048019|gb|AAY99674.1| beta-lactamase [Broad host range vector pBMT-1]
 gi|69048101|gb|AAY99688.1| beta-lactamase [Broad host range vector pBT-1]
 gi|69048159|gb|AAY99699.1| beta-lactamase [Broad host range vector pBMTB-1]
 gi|69048310|gb|AAY99718.1| beta-lactamase [Broad host range vector pBTB-1]
 gi|69048378|gb|AAY99734.1| beta-lactamase [Broad host range vector pBMTL-1]
 gi|69048448|gb|AAY99748.1| beta-lactamase [Broad host range vector pBTL-1]
 gi|89158284|gb|ABD62895.1| beta-lactamase [Cloning vector pJAZZ-KA]
 gi|258617726|gb|ACV83856.1| beta-lactamase [Broad host range vector pBTBX-1]
 gi|258617753|gb|ACV83877.1| beta-lactamase [Broad host range vector pBMTBX-1]
 gi|258617784|gb|ACV83902.1| beta-lactamase [Broad host range vector pBTBXh-1]
 gi|309378628|emb|CBX22699.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESLRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLATIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K   +   +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGSLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146743440|gb|ABQ43167.1| AmpR [Yeast expression vector pNIA-Ca]
 gi|146743444|gb|ABQ43170.1| AmpR [Yeast expression vector pNIA-Cb]
 gi|146743446|gb|ABQ43171.1| AmpR [Yeast expression vector pNIA-Cc]
          Length = 286

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEASPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|325672916|ref|ZP_08152610.1| D-alanyl-D-alanine endopeptidase [Rhodococcus equi ATCC 33707]
 gi|325556169|gb|EGD25837.1| D-alanyl-D-alanine endopeptidase [Rhodococcus equi ATCC 33707]
          Length = 299

 Score = 54.6 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 82/223 (36%), Gaps = 11/223 (4%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-------KNASEYPPSNSTFKKGST 101
            P   AS  K++TA  V              +T++       ++ ++   S      G  
Sbjct: 68  RPRPTASTAKVITALAVLERKPLAPGEDGPTLTMTEADADLYRDYADRGGSAVAVGAGQQ 127

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++    L  +++ SAN++A  +A     +  ++        ++LG+++T           
Sbjct: 128 LSEYEMLVGMLLPSANNLADTLAVWAFGSLAEYRSAATQLVRSLGMTSTTVGTDASGFSS 187

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +T +D+ +L+     +        +            NTN  +G   G  G+KTG T
Sbjct: 188 STTSTVQDLTLLAAAAVRNPVIAEIVARDHATLSGVGVVFNTNSLLGR-PGVVGLKTGTT 246

Query: 222 CASGFNIVASAIQG--DQSLIAVILG-ALDRNTRNKVSASLLS 261
             +G   + +A  G   + ++  + G     +     +A LL 
Sbjct: 247 DEAGGVFLFAARVGAAGRLVVGAVQGEGRSAHDAVTRAARLLD 289


>gi|495299|gb|AAC36883.1| TEM-26B beta-lactamase [Klebsiella pneumoniae]
          Length = 269

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 72/254 (28%), Gaps = 14/254 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI 243
           +     +   I VI
Sbjct: 246 ALGPDGKPSRIVVI 259


>gi|257057524|ref|YP_003135356.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Saccharomonospora viridis DSM 43017]
 gi|256587396|gb|ACU98529.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Saccharomonospora viridis DSM 43017]
          Length = 517

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMT---AYVVFSFL 69
           ++D  TG  + E   D    PAS TKL+T   A +V    
Sbjct: 146 VVDPATGTTLWERNADQALAPASTTKLLTSAAALLVLDHD 185


>gi|195954348|gb|ACG58881.1| TEM-116 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 272

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 75/265 (28%), Gaps = 14/265 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNK 254
           +     +   I VI     + T ++
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDE 270


>gi|1840129|gb|AAB47269.1| beta-lactamase [Expression vector pCal-n-ek]
 gi|3834576|gb|AAC71017.1| beta-lactamase [Cloning vector pCALnFLAG]
          Length = 286

 Score = 54.2 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVDASPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|48734424|gb|AAT46414.1| beta-lactamase TEM-125 [Escherichia coli]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 81/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +   + +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFLAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MLSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSREPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + R++  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 278


>gi|254967198|gb|ACT97652.1| TEM-168 beta-lactamase [mixed culture bacterium PE_gF3SD01_32]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIDDKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260032|gb|ABQ14377.1| beta-lactamase [uncultured soil bacterium]
 gi|146260045|gb|ABQ14382.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 35  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 94

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 95  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 154

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A  + +            L   +  +        Q+       K       + 
Sbjct: 155 WEPELNEAIPIDERDTTMPVAMATTLRKPLTGELLTLASRQQLIDWMEADKVAGPLLRSA 214

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 215 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|1052964|gb|AAA80669.1| beta-lactamase [Cloning vector YITAG100]
 gi|1052968|gb|AAA80672.1| beta-lactamase [Cloning vector YATAG200]
          Length = 266

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 71/254 (27%), Gaps = 14/254 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI 243
           +     +   I VI
Sbjct: 246 ALGPDGKPSRIVVI 259


>gi|146260230|gb|ABQ14440.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 79/269 (29%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
            +   A   L       ++A+             Y  LD N+G ++    P+  +   S 
Sbjct: 2   LIPFFAAFCLPVFAHPETLAKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V S +   +  L   I  S+N        +       MT+       I  S 
Sbjct: 62  FKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSD 121

Query: 117 NDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +  ++   ++   F+ +M +    L         A    +            L 
Sbjct: 122 NTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  +        Q+       K       +          K+G        I+A+   
Sbjct: 182 KLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGP 241

Query: 235 GDQ--SLIAV-ILGAL-DRNTRNKVSASL 259
             +   ++A+   G+    + RN+  A +
Sbjct: 242 DGKPSRIVAIYTTGSQATMDERNRQIAEI 270


>gi|14486653|gb|AAK63223.1| class A beta-lactamase Sed1 [Citrobacter sedlakii]
          Length = 295

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 11/237 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   V+     D  +   S +K+MTA  V    +    +L   +TI K         + 
Sbjct: 60  ADNSQVLY--RADERFAMCSTSKVMTAAAVLKQSETHDGILQQKMTIKKADLTNWNPVTE 117

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFM 153
              G+TMTL       +  S N     +            F + + +T+  L        
Sbjct: 118 KYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGPGNVTAFARSIGDTTFRLDRKEPELN 177

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    +       L      D        Q+            +  A       
Sbjct: 178 TAIPGDERDTTSPLAMAKSLRKLTLGDALAGPQRAQLVDWLKGNTTGGQSIRAGLPAHWV 237

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
            G KTG       N +A     D+  L+ V         A  R      +A +++ G
Sbjct: 238 VGDKTGAGDYGTTNDIAVIWPEDRAPLVLVTYFTQPQQDAKWRKDVLAAAAKIVTEG 294


>gi|11514176|pdb|1FQG|A Chain A, Molecular Structure Of The Acyl-Enzyme Intermediate In
           Tem- 1 Beta-Lactamase
          Length = 263

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WNPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|146260192|gb|ABQ14426.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +   G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAERG 271


>gi|74422851|gb|ABA06586.1| mutant extended-spectrum beta-lactamase SHV-64 [Klebsiella
           pneumoniae]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVLLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|146259997|gb|ABQ14362.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 78/271 (28%), Gaps = 10/271 (3%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
           + +   A   L       ++ +             Y  LD N+G ++    P+  +   S
Sbjct: 1   RLIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|114842972|gb|ABI81768.1| beta-lactamase TEM-157 [Enterobacter cloacae]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S++        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQSDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|4731623|gb|AAD28531.1|AF134572_2 beta-lactamase [Cloning vector p34S-Sm2]
 gi|4731626|gb|AAD28533.1|AF134573_2 beta-lactamase [Cloning vector p34S-Sm3]
 gi|1262901|gb|AAB36663.1| beta-lactamase [Expression vector pEXT20]
 gi|3135594|gb|AAC26206.1| beta-lactamase [Cloning vector p34S-Cm]
 gi|3135597|gb|AAC26208.1| beta-lactamase [Cloning vector p34S-Gm]
 gi|3135600|gb|AAC26210.1| beta-lactamase [Cloning vector p34S-Km]
 gi|3135603|gb|AAC26212.1| beta-lactamase [Cloning vector p34S-Sm]
 gi|3135606|gb|AAC26214.1| beta-lactamase [Cloning vector p34S-Tc]
 gi|3135609|gb|AAC26216.1| beta-lactamase [Cloning vector p34S-Tp]
 gi|3777575|gb|AAC64938.1| beta-lactamase [Cloning vector p34S-Cm2]
 gi|3777578|gb|AAC64940.1| beta-lactamase [Cloning vector p34S-Km3]
 gi|3777581|gb|AAC64942.1| beta-lactamase [Cloning vector p34S-Tp2]
 gi|9885347|gb|AAG01407.1| beta-lactamase [Integration vector pVH-2]
 gi|50253789|gb|AAT72049.1| beta-lactamase [Promoter-probe vector pXH200]
 gi|50253793|gb|AAT72052.1| beta-lactamase [Promoter-probe vector pXH201]
 gi|50253797|gb|AAT72055.1| beta-lactamase [Promoter-probe vector pXH202]
 gi|50253801|gb|AAT72058.1| beta-lactamase [Promoter-probe vector pXH203]
 gi|50253805|gb|AAT72061.1| beta-lactamase [Promoter-probe vector pXH204]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMP 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|18996298|emb|CAC83818.1| ampicillin resistance protein [Expression vector pEUKA4-crgA]
 gi|18996302|emb|CAC83815.1| ampicillin resistance protein [Expression vector pEUKA4-gox1]
 gi|29788131|emb|CAD68163.1| beta-lactamase [Cloning vector pEUKA11]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+    +  K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWLLADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|2970345|gb|AAC05975.1| beta-lactamase TEM-60 [Providencia stuartii]
          Length = 286

 Score = 54.2 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDPNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMR 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K                  K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRCALPAGWLIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|50347099|gb|AAT75225.1| beta-lactamase SHV-30 [Enterobacter cloacae]
          Length = 286

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 69/259 (26%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGSVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG +      
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNKAERIVVIYL 259


>gi|6176544|gb|AAF05612.1|AF190693_1 inhibitor-resistant beta-lactamase TEM-78 [Escherichia coli]
          Length = 286

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 80/273 (29%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRREPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
           +     +   I VI   G+    + R++  A +
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 278


>gi|82395024|gb|ABB72432.1| extended spectrum beta-lactamase TEM-144 [Escherichia coli]
          Length = 286

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+ 
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALLAGWFIADKSGAGERGSLGIIE 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|291586291|gb|ADE18898.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Montevideo]
          Length = 202

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|291586287|gb|ADE18896.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
          Length = 215

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|291586275|gb|ADE18890.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Oranienburg]
          Length = 248

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|291586263|gb|ADE18884.1| TEM-1 beta-lactamase [Escherichia coli]
 gi|291586267|gb|ADE18886.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
 gi|291586269|gb|ADE18887.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
 gi|291586271|gb|ADE18888.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
 gi|291586273|gb|ADE18889.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Hadar]
 gi|291586277|gb|ADE18891.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Montevideo]
 gi|291586279|gb|ADE18892.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
 gi|291586281|gb|ADE18893.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
 gi|291586283|gb|ADE18894.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
 gi|291586285|gb|ADE18895.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
          Length = 255

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|291586261|gb|ADE18883.1| TEM-1 beta-lactamase [Escherichia coli]
          Length = 256

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|12018137|gb|AAG45415.1| TEM-derived extended spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|552996|gb|AAA32208.1| ampicillinase [Enterobacteria phage f1]
          Length = 225

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|56463101|gb|AAV91692.1| beta-lactamase TEM [Escherichia coli]
 gi|56463103|gb|AAV91693.1| beta-lactamase TEM [Escherichia coli]
 gi|56463105|gb|AAV91694.1| beta-lactamase TEM [Escherichia coli]
          Length = 221

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|146260176|gb|ABQ14418.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 76/267 (28%), Gaps = 9/267 (3%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
             +A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 5   FFVAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 65  LLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 124

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +            L   +
Sbjct: 125 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 185 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 244

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 245 PSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|28192516|gb|AAN05027.1| TEM-110 beta-lactamase [Klebsiella oxytoca]
          Length = 261

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 71/249 (28%), Gaps = 15/249 (6%)

Query: 11  AMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              +  FP  +  ET                Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 181 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 240

Query: 238 --SLIAVIL 244
              ++ + +
Sbjct: 241 PSRIVVIYM 249


>gi|146260007|gb|ABQ14366.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 14/267 (5%)

Query: 11  AMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              +  FP  +  ET                Y  LD N+G ++    P+  +   S  K+
Sbjct: 5   FFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 65  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 124

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +            L   +
Sbjct: 125 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             + P      Q+       K       +          K+G        I+A+     +
Sbjct: 185 TGELPTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 244

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 245 PSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|75908313|ref|YP_322609.1| penicillin-binding protein, transpeptidase [Anabaena variabilis
           ATCC 29413]
 gi|75702038|gb|ABA21714.1| Penicillin-binding protein, transpeptidase [Anabaena variabilis
           ATCC 29413]
          Length = 424

 Score = 53.8 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 14/252 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN-ASEYPPS 92
           LD  TG  + +   +  +  AS  K      +F  +   +      + + ++  +    +
Sbjct: 185 LDMETGEYL-DINGEKTFAAASTIKFPILIALFEEIDAGRINPNETLVMRRDLMTGGSGT 243

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
               K GS   L      +++ S N     I + L          +N   ++ GL  T  
Sbjct: 244 MQYRKAGSKFKLMETASKMMIISDNTATNMIIDRL-----GGKNRLNQRFRSWGLQNTVI 298

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            N  G  +  + T+ +D+  L+  I  +              +   K  +          
Sbjct: 299 RNLLGDFKGTNKTSPKDLVRLAALISNNKLLSATSNSRVMDIMSRCKNRSLLPVGLGKGA 358

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
               KTG       +         +  +A I+ A         + +     F N+  R  
Sbjct: 359 VIAHKTGTLGRVLGDAGIIQTPSGKRYLAGIMVARP----FGDARA---KAFINQVSRLV 411

Query: 273 INYIIKDFYQQN 284
             Y+ +    +N
Sbjct: 412 YGYLDQPTSARN 423


>gi|146260094|gb|ABQ14394.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHCSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|325924216|ref|ZP_08185775.1| beta-lactamase class A [Xanthomonas gardneri ATCC 19865]
 gi|325545297|gb|EGD16592.1| beta-lactamase class A [Xanthomonas gardneri ATCC 19865]
          Length = 301

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 6/230 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG        D  +   S  K + A  V   + + K  L   + I  +       
Sbjct: 59  LLDSATGK-HFGQREDERFPMCSTFKFVLAAAVLQRVDQGKLTLAQRVKIRASDMLSHAP 117

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +       +    F++ + +T         
Sbjct: 118 VTERHVGGSLSVAELCRATMIYSDNPAANLLFPLVGDPQGLTAFLRGIGDTQTRSDRHEP 177

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A     L   +  D  Q     Q+    I  +       A    
Sbjct: 178 EMNQFAAGDPRDTTTPAAMALTLRTLLLGDALQPASRKQLSDWMIDNRTGDTCLRAGLPR 237

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKVSA 257
               G KTG       N +A           L+   L     ++  + +A
Sbjct: 238 SWKIGDKTGSNGIDTRNDIAILWPPKGRAPLLLTTYLNGASVDSDARDAA 287


>gi|146260117|gb|ABQ14400.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEMHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|259014674|gb|ACV88637.1| beta-lactamase TEM-1 [Escherichia coli]
          Length = 256

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 14/252 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPA 54
           V +     +   P  +  ET                Y  LD N+G ++    P+  +   
Sbjct: 2   VALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMM 61

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K++    V S +   +  L   I  S+N        +       MT+       I  
Sbjct: 62  STFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITM 121

Query: 115 SANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           S N  A  +  ++   ++   F+ +M +    L         A    +      A     
Sbjct: 122 SDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATT 181

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L   +  +        Q+       K       +          K+G        I+A+ 
Sbjct: 182 LRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAAL 241

Query: 233 IQGDQS-LIAVI 243
               +   I VI
Sbjct: 242 GPDGKPSRIVVI 253


>gi|259014672|gb|ACV88636.1| beta-lactamase TEM-1 [Escherichia coli]
          Length = 261

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 14/252 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPA 54
           V +     +   P  +  ET                Y  LD N+G ++    P+  +   
Sbjct: 2   VALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMM 61

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K++    V S +   +  L   I  S+N        +       MT+       I  
Sbjct: 62  STFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITM 121

Query: 115 SANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           S N  A  +  ++   ++   F+ +M +    L         A    +      A     
Sbjct: 122 SDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATT 181

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L   +  +        Q+       K       +          K+G        I+A+ 
Sbjct: 182 LRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAAL 241

Query: 233 IQGDQS-LIAVI 243
               +   I VI
Sbjct: 242 GPDGKPSRIVVI 253


>gi|241889185|ref|ZP_04776488.1| hypothetical protein GEMHA0001_1037 [Gemella haemolysans ATCC
           10379]
 gi|241864022|gb|EER68401.1| hypothetical protein GEMHA0001_1037 [Gemella haemolysans ATCC
           10379]
          Length = 399

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 76/247 (30%), Gaps = 14/247 (5%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + + NTG +I++   +   +   L   +  Y++   LK KK  L   I I  +  +   
Sbjct: 44  VVSELNTGKIISKRGENEKVSVGKLPNYLALYLLTDNLKNKKITLDEKINI-ASGDDILS 102

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
                   +       L+     S N              K+ +  M+     L      
Sbjct: 103 KYKIESSITVKDAIFLLENENSNSLNQAVFTHFNVTLDKAKETLAAMSLHDTKLESLD-- 160

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      + +TA++++ L+  I  ++P+     +     +  ++  N +       
Sbjct: 161 -------NNGNNTSTAKNISYLTSLILKNYPEITEITKNPEHTLVSREKINNSVEFKESD 213

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILG-ALDRNTRNKVSASLLSMGFYNKTDR 270
                +      S  N V  A  G+  LI  +L  + D+ T            F N   +
Sbjct: 214 ---KFRVLGLDYSDKNSVTYAYSGNTKLIITVLNQSDDKATYFDKLQKTYDYLFSNYNYK 270

Query: 271 KKINYII 277
             +    
Sbjct: 271 LALKAGT 277


>gi|52078046|gb|AAU25807.1| beta-lactamase LEN-5 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYIRLCVISLLATLPLAVYAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|315940017|gb|ADU56219.1| TEM-2 extended-spectrum beta-lactamase [Escherichia coli]
 gi|315940021|gb|ADU56221.1| TEM-2 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 219

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MISTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|258551275|gb|ACV74420.1| beta-lactamase [Expression shuttle vector pGAPDH.Rep68]
 gi|258551278|gb|ACV74422.1| beta-lactamase [Expression shuttle vector pGAPDH.Rep68(Y156F)]
          Length = 286

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGARERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260017|gb|ABQ14371.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 70/259 (27%), Gaps = 21/259 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
            +   A   L       ++ + N           Y  LD N+G ++    P+  +   S 
Sbjct: 2   LIPFFAAFCLPVFAHPETLVKANDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V S +   +  L   I  S+N        +       MT+       I  S 
Sbjct: 62  FKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSD 121

Query: 117 NDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +  ++   ++   F+ +M +    L         A    +            L 
Sbjct: 122 NTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  +        Q+       K       +          K+G            A +
Sbjct: 182 KLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSG------------AGE 229

Query: 235 GDQSLIAVILGALDRNTRN 253
                I   LG   + +R 
Sbjct: 230 RGSRGIIAALGPDGKPSRF 248


>gi|146259995|gb|ABQ14361.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            I     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   AIIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|57236771|gb|AAW48997.1| TEM beta-lactamase [Vibrio cholerae]
 gi|197725587|gb|ACH73002.1| TEM beta-lactamase [Acinetobacter baumannii]
          Length = 286

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGGILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+++M +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLRNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|10641070|dbj|BAB16308.1| TEM-derived extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDCWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260162|gb|ABQ14413.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 69/258 (26%), Gaps = 13/258 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQSLIAVILGALDRNT 251
              +    V++       
Sbjct: 241 PDGKPSHIVVIYTTGSQA 258


>gi|237640325|ref|YP_002891180.1| AmpR [Escherichia coli]
 gi|229561544|gb|ACQ77747.1| AmpR [Escherichia coli]
          Length = 278

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 77/267 (28%), Gaps = 9/267 (3%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +  A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 5   LFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 65  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 124

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 125 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 185 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 244

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 245 PSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|10443724|gb|AAG17550.1| beta-lactamase SHV-14 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.8 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGSVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|4732037|gb|AAD28563.1|AF118920_1 beta-lactamase [Cloning vector pSPZ1(+)]
 gi|22000816|gb|AAM88286.1|AF525778_1 beta lactamase [Expression vector pCMH285]
 gi|452349|emb|CAA82706.1| unnamed protein product [synthetic construct]
 gi|4322593|gb|AAD16103.1| beta-lactamase [Cloning vector pCPT8]
 gi|4322640|gb|AAD16105.1| beta-lactamase [Cloning vector pCPT9]
 gi|13094135|dbj|BAB32736.1| beta-lactamase [Cloning vector pPV2]
 gi|13094138|dbj|BAB32738.1| beta-lactamase [Cloning vector pPVLUC441]
 gi|22001013|gb|AAM82245.1| beta lactamase [Expression vector pCMH411]
 gi|222093508|gb|ACM43516.1| beta-lactamase [Transformation vector pOKE104]
          Length = 286

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++  + + S +   +  L      S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCHTLLSRIDAGQEQLGRRARYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMP 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|29831205|ref|NP_825839.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces avermitilis
           MA-4680]
 gi|29608319|dbj|BAC72374.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           avermitilis MA-4680]
          Length = 461

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 22/58 (37%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+   + P L            ++D  TG  +     D    PAS TK+ TA  V S 
Sbjct: 73  ALAGVLDPLLKDGSLGTRRSAAVVDVATGRRLYGKGVDEALTPASTTKIATAVAVLSA 130


>gi|84380855|gb|ABC58727.1| extended-spectrum beta-lactamase SHV-86 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRFIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASRRGARGIVALLGPNNKAER 253


>gi|21388250|emb|CAC85660.1| TEM-93 ES-beta-lactamase [Escherichia coli]
          Length = 286

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|3282024|emb|CAA76793.1| beta-lactamase class A [Klebsiella pneumoniae]
 gi|170652709|gb|ACB22021.1| extended spectrum beta-lactamase blaTEM-20 [Escherichia coli]
          Length = 286

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|329118533|ref|ZP_08247237.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria bacilliformis
          ATCC BAA-1200]
 gi|327465268|gb|EGF11549.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria bacilliformis
          ATCC BAA-1200]
          Length = 469

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + + D  +G V+AE+  D P NPAS  KL+TAY     
Sbjct: 31 AFFVQDLRSGKVLAEHRADVPLNPASTMKLVTAYAALRA 69


>gi|325533970|pdb|3P98|A Chain A, The Crystal Structure Of The Extended Spectrum
           Beta-Lactamase Tem-72 Reveals Inhibition By Citrate
 gi|325533971|pdb|3P98|B Chain B, The Crystal Structure Of The Extended Spectrum
           Beta-Lactamase Tem-72 Reveals Inhibition By Citrate
 gi|6606272|gb|AAF19150.1|AF157413_1 beta-lactamase TEM-72 [Proteus mirabilis]
 gi|6606274|gb|AAF19151.1|AF157553_1 beta-lactamase TEM-72 [Morganella morganii]
          Length = 286

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASKRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|215261172|pdb|3CMZ|A Chain A, Tem-1 Class-A Beta-Lactamase L201p Mutant Apo Structure
          Length = 263

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTPASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|257068455|ref|YP_003154710.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Brachybacterium faecium DSM 4810]
 gi|256559273|gb|ACU85120.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Brachybacterium faecium DSM 4810]
          Length = 469

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           ++D  TG ++A   PD    PAS  KL+TA  V    
Sbjct: 104 VVDAGTGQILASRDPDTALVPASTLKLLTAAAVLREY 140


>gi|6466826|gb|AAF13045.1|AF157641_1 Hrd6-1 [Desulfitobacterium dehalogenans]
          Length = 251

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 38/150 (25%), Gaps = 4/150 (2%)

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            +            K   +   N        G  GMK             SA +    +I
Sbjct: 19  FREYIKPIPCIPREKKCTHRMINEISSFADDGITGMKR-DIPLLPKLFSRSASRDGLDVI 77

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEE-VCTT 299
            VIL +  R        +LL  GF    +             +    ++  ++++ +  T
Sbjct: 78  GVILKSPGREI-YTDMQALLDYGFEQFENTLYKGIGDSLGQIEIQGQQINLLTDQALWIT 136

Query: 300 QKEIINYNTQMKEAKDKESHFIDFEKITLL 329
           QK                    D     +L
Sbjct: 137 QKRDKALAQPRINVLPIRGELTDVAAGQVL 166


>gi|17987197|ref|NP_539831.1| penicillin-binding protein 6 (D-alanyl-D-alanine carboxypeptidase
           fraction C) [Brucella melitensis bv. 1 str. 16M]
 gi|17982867|gb|AAL52095.1| penicillin-binding protein 6 (d-alanyl-d-alanine carboxypeptidase
           fraction c) [Brucella melitensis bv. 1 str. 16M]
          Length = 182

 Score = 53.4 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKK 272
            DG+KTG+T  SG+N+V+SA   ++ L+ V+LGA     R+   A LL+  F    + K 
Sbjct: 1   MDGIKTGYTNVSGYNLVSSAYINNRHLVGVVLGAGSAGQRDGQMAKLLTR-FGGVDNGKA 59

Query: 273 INYIIKDFYQQNLSNEVPNISEEVC 297
              +     Q   +   P++  ++ 
Sbjct: 60  APLVAMAKPQAVTAKLKPDVVADLI 84


>gi|295395567|ref|ZP_06805761.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971586|gb|EFG47467.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Brevibacterium mcbrellneri ATCC 49030]
          Length = 521

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           P    A+        + D  TG  + +   +    PAS+TK++TA      
Sbjct: 135 PIFDSAKDPSAFSAEVRDAKTGDTLYDKDANRARTPASVTKVLTATAALDA 185


>gi|75907630|ref|YP_321926.1| penicillin-binding protein, transpeptidase [Anabaena variabilis
           ATCC 29413]
 gi|75701355|gb|ABA21031.1| Penicillin-binding protein, transpeptidase [Anabaena variabilis
           ATCC 29413]
          Length = 504

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 65/233 (27%), Gaps = 7/233 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L N+   L+ A  N  P   L+D +TG    +    +    AS  K+      F  +   
Sbjct: 194 LKNVVQQLATANPNLSPGVFLVDLDTGG-YVDINAANALPAASTIKIPILVAFFQDVDAG 252

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K  L   +T+ +        N  +K   T      +   ++  +++ A  +  +     +
Sbjct: 253 KIRLDEVLTMQQEMVAGGSGNFQYKPAGTQYPALEVATKMITVSDNTATNMLIARLGGIE 312

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
              +   +      +      +  G            M ++S               I  
Sbjct: 313 ALNERFRSWGLTTTVIRNILPDLPGTNTTSPKELGNIMTMVSQGNLVSMRSRDQILDIMR 372

Query: 193 LEIKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
              +    P      G   GA    KTG       +         +  I  ++
Sbjct: 373 QTERDNLLP-----SGLGAGARVYHKTGDIGTMLADAGLIDTPTGKRYIVAVM 420


>gi|146260160|gb|ABQ14412.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 78/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +   + +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFLAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|13492214|gb|AAK28131.1|AF335419_1 beta-lactamase [Cloning vector pPGKneo-I]
 gi|13492219|gb|AAK28135.1|AF335420_2 beta-lactamase [Cloning vector pPGKneo-II]
 gi|228484711|gb|ACQ43938.1| beta-lactamase [cloning vector pHC02]
 gi|228484715|gb|ACQ43941.1| beta-lactamase [cloning vector pHC03]
 gi|228484719|gb|ACQ43944.1| beta-lactamase [cloning vector pHC04]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++  + + S +   +  L      S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCHTLLSRIDAGQEQLGRRARYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDESDTTMPVAMP 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260070|gb|ABQ14389.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYAPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|56123232|gb|AAV74524.1| beta-lactamase TEM1E [Escherichia coli]
          Length = 269

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 78/269 (28%), Gaps = 17/269 (6%)

Query: 8   IAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
           +     +   P  +  ET                Y  LD N+G ++    P+  +   S 
Sbjct: 1   LIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V S +   +  L   I  S+N        +       MT+       I  S 
Sbjct: 61  FKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSD 120

Query: 117 NDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +  ++   ++   F+ +M +    L         A    +      A     L 
Sbjct: 121 NTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLR 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  +        Q+       K       +          K+G        I+A+   
Sbjct: 181 KLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGP 240

Query: 235 GDQS-LIAVI--LGAL-DRNTRNKVSASL 259
             +   I VI   G+    + RN+  A +
Sbjct: 241 DGKPSRIVVIYTTGSQATMDERNRQIAEI 269


>gi|13236848|gb|AAK14792.1| extended-spectrum beta-lactamase TEM-88 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTDELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|312141822|ref|YP_004009158.1| d-alanyl-d-alanine carboxypeptidase [Rhodococcus equi 103S]
 gi|311891161|emb|CBH50480.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus equi
           103S]
          Length = 302

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 82/223 (36%), Gaps = 11/223 (4%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-------KNASEYPPSNSTFKKGST 101
            P   AS  K++TA  V              +T++       ++ ++   S      G  
Sbjct: 71  RPRPTASTAKVITALAVLERKPLAPGEDGPTLTMTEADADLYRDYADRGGSAVAVGAGQQ 130

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           ++    L  +++ SAN++A  +A     +  ++        ++LG+++T           
Sbjct: 131 LSEYEMLVGMLLPSANNLADTLAVWAFGSLAEYRTAATQLVRSLGMTSTTVGTDASGFSS 190

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +T +D+ +L+     +        +            NTN  +G   G  G+KTG T
Sbjct: 191 STTSTVQDLTLLAAAAVRNPVIAEIVARDHATLSGVGVVFNTNSLLGR-PGVVGLKTGTT 249

Query: 222 CASGFNIVASAIQG--DQSLIAVILG-ALDRNTRNKVSASLLS 261
             +G   + +A  G   + ++  + G     +     ++ LL 
Sbjct: 250 DEAGGVFLFAARVGAAGRLVVGAVQGEGRSAHDAVTRASRLLD 292


>gi|24158844|pdb|1LI9|A Chain A, Crystal Structure Of Tem-34 Beta-Lactamase At 1.5 Angstrom
          Length = 263

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMVSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|304359286|gb|ADM25824.1| extended spectrum beta-lactamase SHV-134 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLREIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|146260043|gb|ABQ14381.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 77/267 (28%), Gaps = 7/267 (2%)

Query: 4   FLVIIAMAMLS---NIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           F     + + +    +       +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 5   FFAAFCLPVFAHPETLVKVKGAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 65  LLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 124

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +            L   +
Sbjct: 125 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 185 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 244

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 245 PSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|227501199|ref|ZP_03931248.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus tetradius ATCC
           35098]
 gi|227216600|gb|EEI82004.1| D-alanyl-D-alanine carboxypeptidase [Anaerococcus tetradius ATCC
           35098]
          Length = 313

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN- 85
               +++ D N G  +         + ASL+KL        +    K  L   + IS   
Sbjct: 59  DALAFSVYDLNEGKYLFYEGGKQLPSVASLSKLF----AIDYA-MTKVKLDDKVEISDEL 113

Query: 86  -ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES-----------LCKTEKK 133
            +     S+    +    T    ++ ++V S ND A A+A +             +  + 
Sbjct: 114 LSLVPEGSSLANLRSGEYTAKQIIQAMLVPSGNDAAYALAYNIGKKELGDGYSTKEYVEY 173

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM--HYFQIK 191
           FV+ + +  K  G + T   +  G     +        +    +  DF +          
Sbjct: 174 FVKKLEDYLKKEGYTNTDLFDPSGFSTQAYTDLDDINRVALKLLDYDFVRECVGESSFTI 233

Query: 192 GLEIKGKKYPNTNWA-----VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
                   + NTN       +       G+KTG T A  +N++A   +  +  +   L A
Sbjct: 234 HTNQGDFTWKNTNEFLDKGSLYYNKYIKGLKTG-TMAESYNLLALYEKDGKGYLITCLAA 292

Query: 247 LDRNTRNKVSASLLS 261
                R +   + ++
Sbjct: 293 KSDKDRYQAVQAAIN 307


>gi|146260002|gb|ABQ14364.1| beta-lactamase [uncultured soil bacterium]
 gi|146260004|gb|ABQ14365.1| beta-lactamase [uncultured soil bacterium]
 gi|146260011|gb|ABQ14368.1| beta-lactamase [uncultured soil bacterium]
 gi|146260013|gb|ABQ14369.1| beta-lactamase [uncultured soil bacterium]
 gi|146260015|gb|ABQ14370.1| beta-lactamase [uncultured soil bacterium]
 gi|146260019|gb|ABQ14372.1| beta-lactamase [uncultured soil bacterium]
 gi|146260024|gb|ABQ14374.1| beta-lactamase [uncultured soil bacterium]
 gi|146260026|gb|ABQ14375.1| beta-lactamase [uncultured soil bacterium]
 gi|146260035|gb|ABQ14378.1| beta-lactamase [uncultured soil bacterium]
 gi|146260037|gb|ABQ14379.1| beta-lactamase [uncultured soil bacterium]
 gi|146260039|gb|ABQ14380.1| beta-lactamase [uncultured soil bacterium]
 gi|146260049|gb|ABQ14383.1| beta-lactamase [uncultured soil bacterium]
 gi|146260063|gb|ABQ14387.1| beta-lactamase [uncultured soil bacterium]
 gi|146260097|gb|ABQ14395.1| beta-lactamase [uncultured soil bacterium]
 gi|146260114|gb|ABQ14399.1| beta-lactamase [uncultured soil bacterium]
 gi|146260136|gb|ABQ14406.1| beta-lactamase [uncultured soil bacterium]
 gi|146260155|gb|ABQ14410.1| beta-lactamase [uncultured soil bacterium]
 gi|146260166|gb|ABQ14414.1| beta-lactamase [uncultured soil bacterium]
 gi|146260178|gb|ABQ14419.1| beta-lactamase [uncultured soil bacterium]
 gi|146260188|gb|ABQ14424.1| beta-lactamase [uncultured soil bacterium]
 gi|146260214|gb|ABQ14434.1| beta-lactamase [uncultured soil bacterium]
 gi|146260218|gb|ABQ14435.1| beta-lactamase [uncultured soil bacterium]
 gi|146260223|gb|ABQ14437.1| beta-lactamase [uncultured soil bacterium]
 gi|146260225|gb|ABQ14438.1| beta-lactamase [uncultured soil bacterium]
 gi|146260235|gb|ABQ14442.1| beta-lactamase [uncultured soil bacterium]
 gi|146260242|gb|ABQ14445.1| beta-lactamase [uncultured soil bacterium]
 gi|146260250|gb|ABQ14447.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|146260157|gb|ABQ14411.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|121485911|gb|ABM54869.1| beta-lactamase TEM-159 [Proteus mirabilis]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MISTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|112785120|gb|ABI20750.1| TEM extended-spectrum beta-lactamase [Enterococcus gallinarum]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +       
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAKPNDERDTTMPV 182


>gi|28192514|gb|AAN05026.1| TEM-117 beta-lactamase [Escherichia coli]
          Length = 255

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 70/247 (28%), Gaps = 14/247 (5%)

Query: 11  AMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              +  FP  +  ET                Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 181 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 240

Query: 238 S-LIAVI 243
              I VI
Sbjct: 241 PSRIVVI 247


>gi|21465759|pdb|1JWV|A Chain A, Crystal Structure Of G238a Mutant Of Tem-1 Beta-Lactamase
           In Complex With A Boronic Acid Inhibitor (Sefb4)
          Length = 263

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAAERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|76799932|ref|ZP_00781933.1| DD-carboxypeptidase [Streptococcus agalactiae 18RS21]
 gi|76584716|gb|EAO61473.1| DD-carboxypeptidase [Streptococcus agalactiae 18RS21]
          Length = 96

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 19/97 (19%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAET------------------NKLPYYTLLDTNTGHVI 42
          M + +V     +LS        AE                   NK     ++D N GH++
Sbjct: 1  MPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHIL 59

Query: 43 AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           E+  D   +PAS++K+ T Y++F  L + K    T 
Sbjct: 60 WEDNADLERDPASMSKMXTLYLLFEDLXKGKTSPHTT 96


>gi|223006551|emb|CAQ00120.1| beta-lactamase [Proteus mirabilis]
          Length = 286

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ ++ +    L         A    +      A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNIGDHVTRLDRWEPELNEAIPNDERDTTMPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|27228440|ref|NP_758767.1| beta lactamase [Erwinia amylovora]
 gi|26245317|gb|AAM94881.1| beta lactamase [Erwinia amylovora ATCC BAA-2158]
          Length = 283

 Score = 53.4 bits (126), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 17/273 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGXKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTXMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQSLIAVI---LGAL-DRNTRNKVSASL 259
           +     +    V+    G+    + RN+  A +
Sbjct: 246 ALGPDGKPSRIVVXYPTGSQATMDERNRQIAEI 278


>gi|323186289|gb|EFZ71640.1| beta-lactamase family protein [Escherichia coli 1357]
          Length = 212

 Score = 53.1 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +       
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPV 182


>gi|256862202|gb|ACV32636.1| beta-lactamase Shv126 [Escherichia coli]
          Length = 271

 Score = 53.1 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 67/266 (25%), Gaps = 25/266 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTRN 253
               A +     I  +LG  ++  R 
Sbjct: 233 ----AGKRGARGIVALLGPNNKAERT 254


>gi|73535720|pdb|1YT4|A Chain A, Crystal Structure Of Tem-76 Beta-Lactamase At 1.4 Angstrom
           Resolution
          Length = 263

 Score = 53.1 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I    N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMGDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|37778094|gb|AAR02606.1| beta lactamase [Expression vector pYES260]
 gi|37778096|gb|AAR02607.1| beta lactamase [Expression vector pYES263]
          Length = 207

 Score = 53.1 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    + S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCDTLLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +       
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDESDTTMPV 182


>gi|65319856|ref|ZP_00392815.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
          Length = 120

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            G DG++T F+  S ++ V++A +GD  LI+VIL A + N+    +  LL  GF 
Sbjct: 12  QGVDGLQTSFSTNSNYSFVSTAKRGDTRLISVILDADNENSTFIETKKLLQYGFD 66


>gi|146260054|gb|ABQ14384.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+  M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHSMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|83596180|gb|ABC25482.1| beta-lactamase SHV-71 [Acinetobacter baumannii]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPDNKAER 253


>gi|146260119|gb|ABQ14401.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLATIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|146260172|gb|ABQ14416.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATAL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|546975|gb|AAB30893.1| TEM-2 beta-lactamase {Val-237 for Ala substitution} [Escherichia
           coli, K12, carbenicillin resistance mutant 554, plasmid
           R554, Peptide Plasmid Insertion Mutant, 263 aa]
          Length = 263

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGVGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|255098962|gb|ACU00830.1| TEM-1 beta-lactamase [Escherichia coli]
          Length = 242

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 3   GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 62

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 63  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 122

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 123 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 182

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 183 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 239


>gi|163311071|pdb|3BFD|A Chain A, Crystal Structure Of The Class A Beta-Lactamase Sed-G238c
           Mutant From Citrobacter Sedlakii
 gi|163311072|pdb|3BFD|B Chain B, Crystal Structure Of The Class A Beta-Lactamase Sed-G238c
           Mutant From Citrobacter Sedlakii
 gi|163311073|pdb|3BFD|C Chain C, Crystal Structure Of The Class A Beta-Lactamase Sed-G238c
           Mutant From Citrobacter Sedlakii
 gi|163311074|pdb|3BFD|D Chain D, Crystal Structure Of The Class A Beta-Lactamase Sed-G238c
           Mutant From Citrobacter Sedlakii
          Length = 263

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 11/237 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   V+     D  +   S +K+MTA  V    +    +L   +TI K         + 
Sbjct: 28  ADNSQVLY--RADERFAMCSTSKVMTAAAVLKQSETHDGILQQKMTIKKADLTNWNPVTE 85

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFM 153
              G+TMTL       +  S N     +            F + + +T+  L        
Sbjct: 86  KYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGPGNVTAFARSIGDTTFRLDRKEPELN 145

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    +       L      D        Q+            +  A       
Sbjct: 146 TAIPGDERDTTSPLAMAKSLRKLTLGDALAGPQRAQLVDWLKGNTTGGQSIRAGLPAHWV 205

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
            G KTG       N +A     D+  L+ V         A  R      +A +++ G
Sbjct: 206 VGDKTGACDYGTTNDIAVIWPEDRAPLVLVTYFTQPQQDAKWRKDVLAAAAKIVTEG 262


>gi|37575400|gb|AAQ93652.1| RDfusion [Ribosome display vector pRDV]
          Length = 581

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 32  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 91

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 92  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 151

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 152 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 211

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 212 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 268


>gi|8569630|pdb|1ERO|A Chain A, X-Ray Crystal Structure Of Tem-1 Beta Lactamase In Complex
           With A Designed Boronic Acid Inhibitor (1r)-2-
           Phenylacetamido-2-(3-Carboxyphenyl)ethyl Boronic Acid
 gi|8569631|pdb|1ERQ|A Chain A, X-Ray Crystal Structure Of Tem-1 Beta Lactamase In Complex
           With A Designed Boronic Acid Inhibitor
           (1r)-1-Acetamido-2- (3-Carboxy-2-Hydroxyphenyl)ethyl
           Boronic Acid
 gi|46015634|pdb|1S0W|A Chain A, 1b Lactamse B LACTAMASE INHIBITOR
 gi|46015636|pdb|1S0W|B Chain B, 1b Lactamse B LACTAMASE INHIBITOR
 gi|157834258|pdb|1XPB|A Chain A, Structure Of Beta-Lactamase Tem1
          Length = 263

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|302553167|ref|ZP_07305509.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces viridochromogenes DSM 40736]
 gi|302470785|gb|EFL33878.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces viridochromogenes DSM 40736]
          Length = 458

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           A+   + P L        P  +++D  TG  +     D    PAS TK+ TA    S +
Sbjct: 75  ALAQALTPLLKDPALGTRPAASVVDVTTGRSLYGTDQDAALTPASTTKIATAVAALSAM 133


>gi|268318352|ref|YP_003292070.1| beta-lactamase [Rhodothermus marinus DSM 4252]
 gi|262335886|gb|ACY49682.1| beta-lactamase [Rhodothermus marinus DSM 4252]
          Length = 296

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 8/173 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLL------DTNTGHVIAENYPDHPWNPA 54
           MR   +++A  +L     F +         Y L       +  TG  +     D  +  A
Sbjct: 1   MRWLFLVLATGLLPWALAFQTEPFGRIEHRYELTLGVAAHNLTTGASVFYR-ADTLFPTA 59

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           S+ KL     ++   ++        + ++                   ++L +A  L+I+
Sbjct: 60  SVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMII 119

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            S N     + + L       +  +N T ++LGL  T  +N          T 
Sbjct: 120 LSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTP 172


>gi|163311067|pdb|3BFC|A Chain A, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
 gi|163311068|pdb|3BFC|B Chain B, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
 gi|163311069|pdb|3BFC|C Chain C, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
 gi|163311070|pdb|3BFC|D Chain D, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
 gi|163311079|pdb|3BFF|A Chain A, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
 gi|163311080|pdb|3BFF|B Chain B, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
 gi|163311081|pdb|3BFF|C Chain C, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
 gi|163311082|pdb|3BFF|D Chain D, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
 gi|163311083|pdb|3BFG|A Chain A, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
 gi|163311084|pdb|3BFG|B Chain B, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
 gi|163311085|pdb|3BFG|C Chain C, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
 gi|163311086|pdb|3BFG|D Chain D, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
          Length = 262

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 11/237 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   V+     D  +   S +K+MTA  V    +    +L   +TI K         + 
Sbjct: 27  ADNSQVLY--RADERFAMCSTSKVMTAAAVLKQSETHDGILQQKMTIKKADLTNWNPVTE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFM 153
              G+TMTL       +  S N     +            F + + +T+  L        
Sbjct: 85  KYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGPGNVTAFARSIGDTTFRLDRKEPELN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    +       L      D        Q+            +  A       
Sbjct: 145 TAIPGDERDTTSPLAMAKSLRKLTLGDALAGPQRAQLVDWLKGNTTGGQSIRAGLPAHWV 204

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
            G KTG       N +A     D+  L+ V         A  R      +A +++ G
Sbjct: 205 VGDKTGACDYGTTNDIAVIWPEDRAPLVLVTYFTQPQQDAKWRKDVLAAAAKIVTEG 261


>gi|38098485|gb|AAR10958.1| extended-spectrum beta-lactamase TEM-131 [Salmonella enterica
           subsp. enterica serovar Typhimurium]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGTGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|23664426|gb|AAN39364.1| SHV beta lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ +++    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIDDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|5733490|gb|AAD49603.1|AF147463_1 beta-lactamase [Expression vector pNam]
 gi|2623824|gb|AAB86560.1| RTEM-1 beta-lactamase [Shuttle vector pMAL-pIII]
 gi|2654023|gb|AAB87677.1| beta-lactamase [Expression vector pMal-X]
 gi|3983123|gb|AAC83814.1| beta-lactamase [Expression vector pMBP-parallel1]
 gi|15216976|gb|AAK92456.1| beta-lactamase [Retrofitting vector pRetroES]
 gi|129278849|gb|ABO28853.1| beta-lactamase [Cloning vector pD-MAL1]
 gi|259490924|gb|ACW82459.1| beta-lactamase [Cloning vector pLitmus 28C1]
 gi|259490927|gb|ACW82461.1| beta-lactamase [Cloning vector pLitSB3Aek]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+    
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERSP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|8569629|pdb|1ERM|A Chain A, X-Ray Crystal Structure Of Tem-1 Beta Lactamase In Complex
           With A Designed Boronic Acid Inhibitor
           (1r)-1-Acetamido-2- (3-Carboxyphenyl)ethane Boronic Acid
          Length = 263

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEAXKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|2467190|emb|CAA73933.1| extended-spectrum TEM-type beta-lactamase variant, TEM-52
           [Klebsiella pneumoniae]
 gi|2612978|gb|AAB84239.1| extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|58615622|gb|AAW80310.1| extended-spectrum beta-lactamase TEM-52 [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|119632825|gb|ABL84416.1| TEM-52 [Salmonella enterica subsp. enterica serovar Typhimurium]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|17232314|ref|NP_488862.1| hypothetical protein all4822 [Nostoc sp. PCC 7120]
 gi|17133959|dbj|BAB76521.1| all4822 [Nostoc sp. PCC 7120]
          Length = 424

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 68/237 (28%), Gaps = 13/237 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN-ASEYPPS 92
           LD  TG  + +   +  +  AS  K      +F  +   +      + + ++  +    +
Sbjct: 185 LDMETGEYL-DINGEKTFAAASTIKFPILIALFEEIDAGRINPNETLVMRRDLMTGGSGT 243

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
               K GS   L      +++ S N     I + L          +N   +  GL  T  
Sbjct: 244 MQYRKAGSRFKLMETASKMMIISDNTATNMIIDRL-----GGKNRLNQKFRTWGLQNTVI 298

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            N  G  +  + T+ +D+  L+  I  +              +   K  +          
Sbjct: 299 RNLLGDFKGTNKTSPKDLVRLAALISNNKLLSATSNSRVMDIMSRCKNRSLLPVGLGKGA 358

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSL---IAVI--LGALDRNTRNKVSASLLSMGF 264
               KTG       +         +     I V    G           + L+  G+
Sbjct: 359 VIAHKTGTLGRVLGDAGIIQTPSGKRYLAGIIVARPFGDARARAFINQVSRLV-YGY 414


>gi|46370395|gb|AAS89983.1| beta-lactamase [Proteus mirabilis]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|4559300|gb|AAD22974.1| extended-spectrum beta-lactamase variant [Salmonella enterica
           subsp. enterica serovar Saintpaul]
          Length = 279

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260195|gb|ABQ14427.1| beta-lactamase [uncultured soil bacterium]
 gi|146260205|gb|ABQ14430.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFYLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|23505686|gb|AAN05028.1| TEM-75 beta-lactamase [Klebsiella pneumoniae]
          Length = 261

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 71/249 (28%), Gaps = 15/249 (6%)

Query: 11  AMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              +  FP  +  ET                Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMATTLRKLL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 181 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 240

Query: 238 --SLIAVIL 244
              ++ + +
Sbjct: 241 PSRIVVIYM 249


>gi|146260220|gb|ABQ14436.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 75/270 (27%), Gaps = 14/270 (5%)

Query: 8   IAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
           +     +   P  +  ET                Y  LD N+G ++    P+  +   S 
Sbjct: 2   LIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V   +   +  L   I  S+N        +       MT+       I  S 
Sbjct: 62  FKVLLCGAVLFRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSD 121

Query: 117 NDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +  ++   ++   F+ +M +    L         A                 L 
Sbjct: 122 NTAANLLLTAIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDGRDTTMPVAMATTLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             +  +        Q+       K       +          K+G        I+A+   
Sbjct: 182 KLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGP 241

Query: 235 GDQS-LIAVILGALDRNTRNKVSASLLSMG 263
             +   I VI     + T ++ +  +  +G
Sbjct: 242 DGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|99031866|pdb|2B5R|A Chain A, 1b Lactamase  B LACTAMASE INHIBITOR
 gi|99031868|pdb|2B5R|B Chain B, 1b Lactamase  B LACTAMASE INHIBITOR
          Length = 263

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N   Y
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVY 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  NSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|224979335|gb|ACN72587.1| beta-lactamase SHV-12-like protein [Salmonella enterica subsp.
           enterica serovar Typhimurium]
          Length = 286

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLEREIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|146260086|gb|ABQ14391.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIYYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|256862198|gb|ACV32634.1| beta-lactamase Shv124 [Klebsiella pneumoniae]
          Length = 271

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +                    +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLDQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|75445751|sp|Q848S4|BLA46_KLEOX RecName: Full=Beta-lactamase SHV-46; Flags: Precursor
 gi|28912445|gb|AAO53445.1| class A beta-lactamase SHV-46 [Klebsiella oxytoca]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLNSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|86605517|ref|YP_474280.1| carboxylesterase [Synechococcus sp. JA-3-3Ab]
 gi|86554059|gb|ABC99017.1| carboxylesterase, beta-lactamase family [Synechococcus sp.
           JA-3-3Ab]
          Length = 386

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 14/231 (6%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              L+             +  +G   A   PD  +  AS+ K+         ++  +  L
Sbjct: 124 LAALADQPGLTA-GALFWEVESGAF-AGVRPDQVFPAASVIKIPILLAFLQAVETGQVRL 181

Query: 77  TTPITISKNASEYPPSNSTFKK-GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
              +T+ ++           +  GS ++   A  L+   S N  A  I + L        
Sbjct: 182 DERLTLREDLRGGGAGVLQTRPLGSRVSALEAATLMSTISDNFAANLIIDRL-----GGR 236

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           + +N   +  GL  T    +  +      + ++ RDM  L               + + L
Sbjct: 237 EALNQKFRQWGLQHTQI--SWWLPDLEGTNTSSPRDMVWLLS-QVEQGRMLSRRSRDRFL 293

Query: 194 EIKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVI 243
           +I  +    + +            KTG   +   +     +   +  +A +
Sbjct: 294 DILWRTQRPSYFRPNLGQEVRIAHKTGTLRSVVGDAGILDLPNGRRYVAAV 344


>gi|47168592|pdb|1PZP|A Chain A, Tem-1 Beta-Lactamase In Complex With A Novel, Core-
           Disrupting, Allosteric Inhibitor
          Length = 263

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+     
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQRDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|291501734|gb|ADE08534.1| extended spectrum beta-lactamase SHV-130 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMTATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGKRGARGIVALLGPNNKAER 253


>gi|291501732|gb|ADE08533.1| extended spectrum beta-lactamase SHV-129 [Escherichia coli]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|90855322|emb|CAI76927.1| beta-lactamase SHV-12 [Escherichia coli]
          Length = 279

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|90403947|gb|ABD93867.1| SHV-12 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 282

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|52630976|gb|AAU84950.1| SHV beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|41584434|gb|AAS09882.1| SHV-5 extended spectrum beta-lactamase [Escherichia coli]
          Length = 285

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|152973620|ref|YP_001338660.1| putative beta-lactamase SHV-12 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|226807808|ref|YP_002791504.1| BlaSHV-12 [Enterobacter cloacae]
 gi|226810122|ref|YP_002791817.1| BlaSHV-12 [Enterobacter cloacae]
 gi|297622236|ref|YP_003675789.1| SHV-12 [Klebsiella oxytoca KOX105]
 gi|18656794|gb|AAL77982.1|AF462395_1 extended-spectrum beta-lactamase SHV-12 [Enterobacter cloacae]
 gi|2113859|emb|CAA66733.1| beta-lactamase SHV-5a [Klebsiella pneumoniae]
 gi|11245765|gb|AAG32592.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|30230493|gb|AAP20889.1| extended-spectrum beta-lactamase SHV-12 [Acinetobacter baumannii]
 gi|31096320|gb|AAP43780.1| beta-lactamase SHV-12 [Escherichia coli]
 gi|40950644|gb|AAR97950.1| beta-lactamase SHV-5 [Escherichia coli]
 gi|41584436|gb|AAS09883.1| SHV-5 extended spectrum beta-lactamase [Escherichia coli]
 gi|56181498|gb|AAV83796.1| extended-spectrum beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|60652542|gb|AAX33294.1| extended-spectrum beta-lactamase SHV-12 [Citrobacter freundii]
 gi|81072648|gb|ABB55352.1| SHV-12 [Enterobacter cloacae]
 gi|118603541|gb|ABL09147.1| beta-lactamase SHV-12 [Shigella flexneri]
 gi|124053901|gb|ABM89157.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|125743010|gb|ABN54707.1| SHV-12 beta-lactamase [Escherichia coli]
 gi|150958402|gb|ABR80430.1| putative beta-lactamase SHV-12 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|160700032|gb|ABX46807.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Braenderup]
 gi|160700034|gb|ABX46808.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700036|gb|ABX46809.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700038|gb|ABX46810.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700040|gb|ABX46811.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700042|gb|ABX46812.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700044|gb|ABX46813.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700046|gb|ABX46814.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Enteritidis]
 gi|160700048|gb|ABX46815.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700050|gb|ABX46816.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700052|gb|ABX46817.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|160700054|gb|ABX46818.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Livingstone]
 gi|167888211|gb|ACA09609.1| extended spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|167888213|gb|ACA09610.1| extended spectrum beta-lactamase SHV-5 [Escherichia coli]
 gi|171466753|gb|ACB46537.1| extended-spectrum beta-lactamase [Enterobacter aerogenes]
 gi|215254418|gb|ACJ64201.1| SHV-12 beta lactamase [Klebsiella pneumoniae]
 gi|221149264|gb|ACM04456.1| SHV-12 extended spectrum beta-lactamase [Escherichia coli]
 gi|225697587|gb|ACO07066.1| beta-lactamase [Klebsiella pneumoniae]
 gi|226426035|gb|ACO54128.1| BlaSHV-12 [Enterobacter cloacae]
 gi|226426349|gb|ACO54441.1| BlaSHV-12 [Enterobacter cloacae]
 gi|238864058|gb|ACR66305.1| beta-lactamase SHV-12 [Raoultella terrigena]
 gi|238864060|gb|ACR66306.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|238864068|gb|ACR66310.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|238864072|gb|ACR66312.1| beta-lactamase SHV-12 [Raoultella terrigena]
 gi|238864076|gb|ACR66314.1| beta-lactamase SHV-12 [Raoultella terrigena]
 gi|238864080|gb|ACR66316.1| beta-lactamase SHV-12 [Cronobacter sakazakii]
 gi|238864082|gb|ACR66317.1| beta-lactamase SHV-12 [Klebsiella sp. 25]
 gi|238864090|gb|ACR66321.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|238864096|gb|ACR66324.1| beta-lactamase SHV-12 [Klebsiella sp. 49]
 gi|238864098|gb|ACR66325.1| beta-lactamase SHV-12 [Klebsiella sp. 52]
 gi|238864100|gb|ACR66326.1| beta-lactamase SHV-12 [Klebsiella oxytoca]
 gi|256862156|gb|ACV32616.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|256862172|gb|ACV32624.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|256862174|gb|ACV32625.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|257043738|gb|ACV33197.1| beta-lactamase blaSHV-12 [Klebsiella pneumoniae]
 gi|257043740|gb|ACV33198.1| beta-lactamase blaSHV-12 [Klebsiella pneumoniae]
 gi|257043746|gb|ACV33201.1| beta-lactamase blaSHV-12 [Klebsiella pneumoniae]
 gi|257043758|gb|ACV33207.1| beta-lactamase blaSHV-2 [Klebsiella pneumoniae]
 gi|257043786|gb|ACV33221.1| beta-lactamase bla-SHV-12 [Klebsiella pneumoniae]
 gi|257043788|gb|ACV33222.1| beta-lactamase bla-SHV-12 [Klebsiella pneumoniae]
 gi|262477919|gb|ACY68229.1| beta-lactamase blaSHV-12 [Klebsiella pneumoniae]
 gi|262477941|gb|ACY68240.1| beta-lactamase blaSHV-12 [Klebsiella pneumoniae]
 gi|281335522|gb|ADA62363.1| putative beta-lactamase SHV-12 [Enterobacter cloacae]
 gi|283857127|gb|ADB45532.1| extended-spectrum beta-lactamase [Enterobacter cloacae]
 gi|284021997|gb|ADB65761.1| beta-lactamase SHV-12 [Enterobacter cloacae]
 gi|293652430|gb|ADE60795.1| beta-lactamase SHV-12 [Enterobacter cloacae]
 gi|294884917|gb|ADF47454.1| beta-lactamase SHV-12 [Pseudomonas aeruginosa]
 gi|295917908|gb|ADG60241.1| BlaSHV-12 [Escherichia coli]
 gi|296492055|gb|ADH29557.1| SHV-12 [Klebsiella oxytoca KOX105]
 gi|298570505|gb|ADI87566.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|298570507|gb|ADI87567.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|298570509|gb|ADI87568.1| beta-lactamase SHV-12 [Klebsiella pneumoniae]
 gi|298570513|gb|ADI87570.1| beta-lactamase SHV-12 [Enterobacter cloacae]
 gi|298570515|gb|ADI87571.1| beta-lactamase SHV-12 [Enterobacter cloacae]
 gi|298570517|gb|ADI87572.1| beta-lactamase SHV-12 [Escherichia coli]
 gi|298570519|gb|ADI87573.1| beta-lactamase SHV-12 [Escherichia coli]
 gi|300810982|gb|ADK35763.1| extended-spectrum beta-lactamase SHV-12 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|13272528|gb|AAK17194.1|AF332513_1 extended spectrum beta-lactamase TEM-63 [Escherichia coli]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260130|gb|ABQ14404.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        ++       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQRLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|66576192|gb|AAY51674.1| extended-spectrum beta-lactamase SHV-55 [Klebsiella pneumoniae]
 gi|160948447|emb|CAI10727.2| beta-lactamase SHV-55 [Klebsiella pneumoniae]
          Length = 286

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRFIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|24158842|pdb|1LHY|A Chain A, Crystal Structure Of Tem-30 Beta-Lactamase At 2.0 Angstrom
          Length = 263

 Score = 53.1 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSSGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|291501736|gb|ADE08535.1| extended spectrum beta-lactamase SHV-131 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|146260174|gb|ABQ14417.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWVEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|146260190|gb|ABQ14425.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++    + +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTALLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|12744477|gb|AAK06649.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
          Length = 260

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|32470071|ref|NP_863013.1| BlaSHV-5 [Escherichia coli]
 gi|61219937|sp|P0A3M1|BLA5_KLEPN RecName: Full=Beta-lactamase SHV-5; Flags: Precursor
 gi|61219939|sp|P0A3M2|BLA5_PSEAE RecName: Full=Beta-lactamase SHV-5; Flags: Precursor
 gi|18656792|gb|AAL77981.1|AF462394_1 extended-spectrum beta-lactamase SHV-5 [Escherichia coli]
 gi|43936|emb|CAA39164.1| beta-lactamase [Klebsiella pneumoniae]
 gi|2113857|emb|CAA66731.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|2113861|emb|CAA66732.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|3769675|gb|AAC64608.1| beta-lactamase SHV-5 [Pseudomonas aeruginosa]
 gi|28629328|gb|AAO49608.1| BlaSHV-5 [Escherichia coli]
 gi|37654372|gb|AAQ96283.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|37654374|gb|AAQ96284.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|37654376|gb|AAQ96285.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|37654378|gb|AAQ96286.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|44443458|gb|AAS47040.1| extended spectrum beta-lactamase [Enterobacter cloacae]
 gi|46254790|gb|AAS86327.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|57635343|emb|CAB71033.2| beta-lactamase SHV-5 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|158518995|gb|ABW70408.1| beta-lactamase SHV-5 [Acinetobacter baumannii]
 gi|238864062|gb|ACR66307.1| beta-lactamase SHV-5 [Escherichia coli]
 gi|238864078|gb|ACR66315.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|257043796|gb|ACV33226.1| beta-lactamase bla-SHV-5 [Klebsiella pneumoniae]
 gi|293652432|gb|ADE60796.1| beta-lactamase SHV-5 [Enterobacter cloacae]
 gi|295917906|gb|ADG60240.1| BlaSHV-5 [Escherichia coli]
 gi|298570511|gb|ADI87569.1| beta-lactamase SHV-129 [Klebsiella pneumoniae]
 gi|298570521|gb|ADI87574.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|298570523|gb|ADI87575.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|298570525|gb|ADI87576.1| beta-lactamase SHV-5 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|315940019|gb|ADU56220.1| TEM-2 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 219

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVAVIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MISTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 182


>gi|146259999|gb|ABQ14363.1| beta-lactamase [uncultured soil bacterium]
          Length = 270

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 9/267 (3%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 3   FFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 63  LLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 122

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +            L   +
Sbjct: 123 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLL 182

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 183 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 242

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 243 PSRIVVIYTTGSQATMDERNRQIAEIG 269


>gi|54873596|gb|AAP33454.2| extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|262477947|gb|ACY68243.1| beta-lactamase blaSHV-31 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGKRGARGIVALLGPNNKAER 253


>gi|46019649|emb|CAG25427.1| beta-lactamase TEM [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|260586480|gb|ACX46122.1| beta-lactamase TEM-135 [Neisseria gonorrhoeae]
 gi|284157381|gb|ADB79815.1| ampicillin resistance protein [Escherichia coli]
 gi|300116045|dbj|BAJ10643.1| beta-lactamase [Neisseria gonorrhoeae]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|595783|gb|AAA56743.1| beta-lactamase [unidentified cloning vector]
 gi|644776|gb|AAA67273.1| beta-lactamase [Cloning vector pPROEX-1]
 gi|145307011|gb|ABP57192.1| beta-lactamase [Expression vector pTRC-LIC]
 gi|257359589|gb|ACV53162.1| beta lactamase [Expression vector pETIA]
 gi|307557352|gb|ADN52080.1| beta-lactamase [Cloning vector pBEM3]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPTAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|4884789|gb|AAD31807.1|AF128862_3 beta-lactamase [Cloning vector pHIND2.2]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRILYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMP 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|7766856|pdb|1ESU|A Chain A, S235a Mutant Of Tem1 Beta-Lactamase
          Length = 263

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKAGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|260656432|pdb|3JYI|A Chain A, Structural And Biochemical Evidence That A Tem-1 {beta}-
           Lactamase Asn170gly Active Site Mutant Acts Via
           Substrate- Assisted Catalysis
 gi|260656433|pdb|3JYI|B Chain B, Structural And Biochemical Evidence That A Tem-1 {beta}-
           Lactamase Asn170gly Active Site Mutant Acts Via
           Substrate- Assisted Catalysis
 gi|260656434|pdb|3JYI|C Chain C, Structural And Biochemical Evidence That A Tem-1 {beta}-
           Lactamase Asn170gly Active Site Mutant Acts Via
           Substrate- Assisted Catalysis
 gi|260656435|pdb|3JYI|D Chain D, Structural And Biochemical Evidence That A Tem-1 {beta}-
           Lactamase Asn170gly Active Site Mutant Acts Via
           Substrate- Assisted Catalysis
 gi|260656436|pdb|3JYI|E Chain E, Structural And Biochemical Evidence That A Tem-1 {beta}-
           Lactamase Asn170gly Active Site Mutant Acts Via
           Substrate- Assisted Catalysis
 gi|260656437|pdb|3JYI|F Chain F, Structural And Biochemical Evidence That A Tem-1 {beta}-
           Lactamase Asn170gly Active Site Mutant Acts Via
           Substrate- Assisted Catalysis
          Length = 263

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELGEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|146260022|gb|ABQ14373.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|163914147|dbj|BAF95849.1| beta-lactamase SHV [Klebsiella pneumoniae]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALSGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|33943602|gb|AAQ55480.1| beta-lactamase SHV-56 [Acinetobacter baumannii]
          Length = 286

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIIYLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|56463107|gb|AAV91695.1| beta-lactamase TEM [Escherichia coli]
          Length = 221

 Score = 52.7 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVCYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             S N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPA 182


>gi|125658590|gb|ABN49114.1| beta-lactamase SHV-97 [Enterococcus faecalis]
          Length = 286

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGKRGARGIVALLGPNNKAER 253


>gi|284486659|gb|ADB90403.1| TEM-1b beta-lactamase [Klebsiella pneumoniae]
          Length = 266

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 9/258 (3%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 3   FFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 62

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 63  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 122

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 123 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLL 182

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 183 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 242

Query: 238 S-LIAVILGALDRNTRNK 254
              I VI     + T ++
Sbjct: 243 PSRIVVIYTTGSQATMDE 260


>gi|46276339|gb|AAS86428.1| TEM beta-lactamase [Acinetobacter sp. U11]
          Length = 264

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 9/258 (3%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 181 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 240

Query: 238 S-LIAVILGALDRNTRNK 254
              I VI     + T ++
Sbjct: 241 PSRIVVIYTTGSQATMDE 258


>gi|146260184|gb|ABQ14422.1| beta-lactamase [uncultured soil bacterium]
 gi|146260247|gb|ABQ14446.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       +T+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGVTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|20150560|pdb|1JVJ|A Chain A, Crystal Structure Of N132a Mutant Of Tem-1 Beta-Lactamase
           In Complex With A N-Formimidoyl-Thienamycine
          Length = 263

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S    A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDATAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|312184022|gb|ADQ42774.1| beta-lactamase TEM-1 [Acinetobacter baumannii]
          Length = 270

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 72/236 (30%), Gaps = 6/236 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 33  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 92

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 93  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 152

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 153 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 212

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
                    K+G        I+A+     +   I VI   G+    + RN+  A +
Sbjct: 213 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEI 268


>gi|261381432|ref|ZP_05986005.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria subflava NJ9703]
 gi|284795582|gb|EFC50929.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria subflava NJ9703]
          Length = 470

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
          +   I+++ ++  + P  ++             + + ++G VIAE+  D   NPAS  KL
Sbjct: 2  KLKSILSIGLMMAVCPSWALDFGRIPENEISVYVQELDSGKVIAEHRADELRNPASTMKL 61

Query: 60 MTAYVVFSF 68
          +TA+  F  
Sbjct: 62 VTAFTAFRM 70


>gi|48527204|gb|AAT45742.1| beta-lactamase TEM-126 [Escherichia coli]
          Length = 286

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERETTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|26000705|gb|AAN75444.1| CTX-M-26 beta-lactamase [Klebsiella pneumoniae]
 gi|38373218|gb|AAR18979.1| beta-lactamase CTX-M-26 [Klebsiella pneumoniae]
          Length = 291

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 81/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M A  V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAAAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIRAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGDYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|134154077|gb|ABO64442.1| TEM beta-lactamase [Acinetobacter haemolyticus]
          Length = 286

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 79/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  +T                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPKTLVKVKDAENQLGARVGYIELDLNSGKILESFRPEKRFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S++        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQSDVVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|146260092|gb|ABQ14393.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWIEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|28195099|gb|AAO33760.1| TEM-7 beta-lactamase [Escherichia coli]
          Length = 261

 Score = 52.7 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 73/258 (28%), Gaps = 14/258 (5%)

Query: 11  AMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              +   P  +  ET                Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCLPVFAHPETLVKVKDAEDKLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTMPAAMATTLRKLL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 181 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 240

Query: 238 S-LIAVILGALDRNTRNK 254
              I VI     + T ++
Sbjct: 241 PSRIVVIYTTGSQATMDE 258


>gi|146260028|gb|ABQ14376.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYLPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|67923291|ref|ZP_00516775.1| similar to Beta-lactamase class A [Crocosphaera watsonii WH 8501]
 gi|67854867|gb|EAM50142.1| similar to Beta-lactamase class A [Crocosphaera watsonii WH 8501]
          Length = 410

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 64/225 (28%), Gaps = 8/225 (3%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +     K   +  +D + G          P   AS  K+      F  + +    L   +
Sbjct: 156 AKYPNVKPQAWF-IDLDNGS-YVTYNGTQPVPAASTIKIPVLVAFFEEVDKGNIHLDQML 213

Query: 81  TISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           T++K+                  T     + +IV S N     +       +    + +N
Sbjct: 214 TMTKDVMVSGSGDMQYMGINKKFTALEVARKMIVISDNTATEMLV-----KQMGGKEVLN 268

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
              K  G+  T   N    ++  + T++ D++ L  RI+                ++G +
Sbjct: 269 KRFKEWGMKNTEINNILPELEGTNKTSSEDLSKLLARIERGDLISARSRDRLIDIMEGTR 328

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                            KTG       +     +   +  I  + 
Sbjct: 329 TRTLLPQGLEKQANIAHKTGDIGTIIGDAGIIDMPTGKRYIGAVF 373


>gi|227540925|ref|ZP_03970974.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227183185|gb|EEI64157.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 414

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 9/63 (14%)

Query: 20  LSIAETNKLPY---------YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            + A   +              + D  TG  + E   D P  PAS+TK++TA      L 
Sbjct: 59  PAQAPELEALSQDPALGEFFGIVTDVQTGETVWEKNADVPGRPASITKVLTATAAVHALP 118

Query: 71  EKK 73
              
Sbjct: 119 AGH 121


>gi|227489337|ref|ZP_03919653.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227090710|gb|EEI26022.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 414

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 9/63 (14%)

Query: 20  LSIAETNKLPY---------YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            + A   +              + D  TG  + E   D P  PAS+TK++TA      L 
Sbjct: 59  PAQAPELEALSQDPALGEFFGIVTDVQTGETVWEKNADVPGRPASITKVLTATAAVHALP 118

Query: 71  EKK 73
              
Sbjct: 119 AGH 121


>gi|197724699|emb|CAP12351.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 64/257 (24%), Gaps = 13/257 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVYAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTGAGERGARG 240

Query: 228 IVASAIQGDQSLIAVIL 244
           IVA      +    V+L
Sbjct: 241 IVALLGPDGKPERIVVL 257


>gi|146260153|gb|ABQ14409.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.7 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 73/271 (26%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A          K    F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLPLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|269218248|ref|ZP_06162102.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212376|gb|EEZ78716.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 447

 Score = 52.3 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            A+ S +    +  E +      + D  +G  IA+  PD P  PAS  K++TA V   
Sbjct: 64  AAVTSALGSLAASPEAHGHVSVVVADAASGKTIAQLEPDTPRAPASNMKIVTAAVALR 121


>gi|256862196|gb|ACV32633.1| beta-lactamase Shv123 [Klebsiella pneumoniae]
          Length = 271

 Score = 52.3 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----ASKRGARGIVALLGGNIKAER 253


>gi|148767222|gb|ABR10608.1| polyprotein [synthetic construct]
          Length = 2975

 Score = 52.3 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 78/271 (28%), Gaps = 10/271 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 46  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 105

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 106 YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 165

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 166 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 225

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG--- 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G   
Sbjct: 226 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASL 285

Query: 264 ----FYNKTDRKKINYIIKDFYQQNLSNEVP 290
                 N    K    +  +     +S  + 
Sbjct: 286 IKHWTSNFDLLKLAGDVESNPGPAGISIALT 316


>gi|53681041|gb|AAU89706.1| LEN-type penicillinase [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVYAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|192988211|pdb|2V1Z|A Chain A, Structure Of A Tem-1 Beta-Lactamase Insertant
           Allosterically Regulated By Kanamycin And Anions.
 gi|192988213|pdb|2V20|A Chain A, Structure Of A Tem-1 Beta-Lactamase Insertant
           Allosterically Regulated By Kanamycin And Anions.
           Complex With Sulfate
          Length = 291

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 64/228 (28%), Gaps = 2/228 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 25  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVK 84

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 85  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 144

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 145 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 204

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                    K+G        I+A+     +    V++       +   
Sbjct: 205 LPAGWFIADKSGAGRRGSRGIIAALGPDGKPSRIVVIYTTGSRKKTDE 252


>gi|23505688|gb|AAN05029.1| TEM-118 beta-lactamase [Klebsiella oxytoca]
          Length = 261

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 10/249 (4%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +      A     L   +
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPAAMATTLRKLL 180

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 181 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGK 240

Query: 238 --SLIAVIL 244
              ++ + +
Sbjct: 241 PSRIVVIYM 249


>gi|323358343|ref|YP_004224739.1| D-alanyl-D-alanine carboxypeptidase [Microbacterium testaceum
           StLB037]
 gi|323274714|dbj|BAJ74859.1| D-alanyl-D-alanine carboxypeptidase [Microbacterium testaceum
           StLB037]
          Length = 572

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 89/262 (33%), Gaps = 15/262 (5%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           ++A+     P    A   +      L+   G     +    P + AS+TK++TA VV   
Sbjct: 208 SVAVQPTAAPPADPAWPAQGEAAIALEGVPGE--LSSSASAPESIASITKIVTALVVLDR 265

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGS-------TMTLDNALKLLIVKSANDIAV 121
           L             ++  S          + S       ++T    L+ +++ SAN+ A 
Sbjct: 266 LPLAPGEQGPSYAFTQADSADYWQYRARGESSLDVPVDGSLTELQMLQGMLIASANNYAQ 325

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
            +A  L  +   F    N      G++    +N  G+      T A  +  L+ +   + 
Sbjct: 326 RLASDLFPSNADFAAAANAYLAERGITGITIVNPTGIEAGNTATPA-ALIALAEKALANP 384

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA---SAIQGDQS 238
                    +        + N N  +    G  G+KTG T  +   + A   +       
Sbjct: 385 VIAEIVRTPELTLPGAGSFKNGNPLLA-DPGVVGVKTG-TLDAWNLLSAKDFTIGTVTVR 442

Query: 239 LIAVILGALDRNTRNKVSASLL 260
             A +LG    + RN+ S  L 
Sbjct: 443 AYAAVLGQPGPDERNQASRDLY 464


>gi|190334222|gb|ACE73899.1| TEM-1 beta-lactamase [synthetic construct]
          Length = 264

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 21  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 80

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 81  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 140

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 141 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 200

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 201 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 257


>gi|169401966|gb|ACA53201.1| TEM beta-lactamase [Bacillus sp. BT-B191]
          Length = 272

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 29  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 88

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 89  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 148

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 149 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 208

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 209 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 265


>gi|124365493|gb|ABN09740.1| ampicillin resistance protein [Cloning and transformation vector
           pUASTattB]
          Length = 276

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 33  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 92

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 93  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 152

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 153 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 212

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 213 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 269


>gi|6137619|pdb|1BT5|A Chain A, Crystal Structure Of The Imipenem Inhibited Tem-1 Beta-
           Lactamase From Escherichia Coli
 gi|16975249|pdb|1JTG|A Chain A, Crystal Structure Of Tem-1 Beta-Lactamase  BETA-Lactamase
           Inhibitor Protein Complex
 gi|16975251|pdb|1JTG|C Chain C, Crystal Structure Of Tem-1 Beta-Lactamase  BETA-Lactamase
           Inhibitor Protein Complex
 gi|157830129|pdb|1AXB|A Chain A, Tem-1 Beta-Lactamase From Escherichia Coli Inhibited With
           An Acylation Transition State Analog
 gi|157830461|pdb|1BTL|A Chain A, Crystal Structure Of Escherichia Coli Tem1 Beta-Lactamase
           At 1.8 Angstroms Resolution
 gi|157833922|pdb|1TEM|A Chain A, 6 Alpha Hydroxymethyl Penicilloic Acid Acylated On The
           Tem- 1 Beta-Lactamase From Escherichia Coli
 gi|209156443|pdb|3C7U|A Chain A, Structural Insight Into The Kinetics And Cp Of
           Interactions Between Tem-1-Lactamase And Blip
 gi|209156445|pdb|3C7U|C Chain C, Structural Insight Into The Kinetics And Cp Of
           Interactions Between Tem-1-Lactamase And Blip
 gi|209156447|pdb|3C7V|A Chain A, Structural Insight Into The Kinetics And Delta-Cp Of
           Interactions Between Tem-1 Beta-Lactamase And Blip
 gi|209156449|pdb|3C7V|C Chain C, Structural Insight Into The Kinetics And Delta-Cp Of
           Interactions Between Tem-1 Beta-Lactamase And Blip
          Length = 263

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|241759430|ref|ZP_04757534.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria flavescens SK114]
 gi|241320212|gb|EER56545.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria flavescens SK114]
          Length = 470

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
          +   I+++ ++  + P  ++             + + ++G VIAE+  D   NPAS  KL
Sbjct: 2  KLKSILSVGLMMAVCPSWALDFGRIPENEISVYVQELDSGKVIAEHRADELRNPASTMKL 61

Query: 60 MTAYVVFSF 68
          +TA+  F  
Sbjct: 62 VTAFTAFRM 70


>gi|117950175|gb|ABK58471.1| beta-lactamase TEM-63 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 277

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 13/160 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
             S N  A  +  ++   ++   F+ +M +    L     
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEP 164


>gi|2853027|gb|AAC02223.1| extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 273

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 13/160 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +  FP  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
             S N  A  +  ++   ++   F+ +M +    L     
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEP 164


>gi|197724691|emb|CAP12347.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVYAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|154269503|gb|ABS72351.1| beta-lactamase SHV-103 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 67/259 (25%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGAGERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNRAERIVVIYL 259


>gi|125658582|gb|ABN49110.1| beta-lactamase SHV-93 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGTVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ +++    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIDDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|21464485|gb|AAM52207.1| class A beta-lactamase TEM-106 [Escherichia coli]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|237652207|gb|ACR08799.1| beta-lactamase TEM-1 [Chryseobacterium gleum]
 gi|238909318|gb|ACR77750.1| beta-lactamase TEM-116 [Burkholderia cenocepacia]
 gi|238909320|gb|ACR77751.1| beta-lactamase TEM-116 [Pannonibacter phragmitetus]
 gi|239787074|gb|ACS16652.1| BlaTEM-116 [Achromobacter denitrificans]
          Length = 177

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 13/160 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 8   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 67

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 68  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 127

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
             S N  A  +  ++   ++   F+ +M +    L     
Sbjct: 128 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEP 167


>gi|229470810|gb|ACQ71977.1| blaTEM-116 [Elizabethkingia meningoseptica]
          Length = 174

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 13/160 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 5   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 64

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 65  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 124

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
             S N  A  +  ++   ++   F+ +M +    L     
Sbjct: 125 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEP 164


>gi|226192761|pdb|3GMW|A Chain A, Crystal Structure Of Beta-Lactamse Inhibitory Protein-I
           (Blip-I) In Complex With Tem-1 Beta-Lactamase
 gi|226192763|pdb|3GMW|C Chain C, Crystal Structure Of Beta-Lactamse Inhibitory Protein-I
           (Blip-I) In Complex With Tem-1 Beta-Lactamase
          Length = 261

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 18  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 77

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 78  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 137

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 138 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 197

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 198 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 254


>gi|15988093|pdb|1JTD|A Chain A, Crystal Structure Of Beta-Lactamase Inhibitor Protein-Ii
           In Complex With Tem-1 Beta-Lactamase
          Length = 263

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|146260105|gb|ABQ14397.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVRDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGPRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|323710394|gb|ADY02598.1| beta-lactamase blaTEM [Shigella sonnei]
 gi|323710396|gb|ADY02599.1| beta-lactamase blaTEM [Shigella dysenteriae 1]
 gi|323710398|gb|ADY02600.1| beta-lactamase blaTEM [Shigella dysenteriae 3]
 gi|323710400|gb|ADY02601.1| beta-lactamase blaTEM [Shigella flexneri 2a]
 gi|323710404|gb|ADY02603.1| beta-lactamase blaTEM [Shigella dysenteriae 2a]
          Length = 263

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 3/228 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 30  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 89

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 90  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 149

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 150 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 209

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
                    K+G        I+A+     +   I VI     + T ++
Sbjct: 210 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDE 257


>gi|291586265|gb|ADE18885.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 176

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 13/160 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
             S N  A  +  ++   ++   F+ +M +    L     
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEP 165


>gi|284486667|gb|ADB90407.1| TEM-1b beta-lactamase [Escherichia coli]
          Length = 264

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 3/228 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 30  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 89

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 90  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 149

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 150 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 209

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
                    K+G        I+A+     +   I VI     + T ++
Sbjct: 210 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDE 257


>gi|284486665|gb|ADB90406.1| TEM-1b beta-lactamase [Escherichia coli]
          Length = 263

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 3/228 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 29  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 88

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 89  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 148

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 149 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 208

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
                    K+G        I+A+     +   I VI     + T ++
Sbjct: 209 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDE 256


>gi|284486663|gb|ADB90405.1| TEM-1b beta-lactamase [Klebsiella pneumoniae]
          Length = 258

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 3/228 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 29  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 88

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 89  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 148

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 149 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 208

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
                    K+G        I+A+     +   I VI     + T ++
Sbjct: 209 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDE 256


>gi|284486661|gb|ADB90404.1| TEM-1b beta-lactamase [Klebsiella pneumoniae]
          Length = 265

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 3/228 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 30  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 89

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 90  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 149

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 150 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 209

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
                    K+G        I+A+     +   I VI     + T ++
Sbjct: 210 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDE 257


>gi|40950646|gb|AAR97951.1| beta-lactamase SHV-5 [Escherichia coli]
          Length = 284

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIAEKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|74422855|gb|ABA06588.1| extended-spectrum beta-lactamase SHV-66 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADQ 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|17232035|ref|NP_488583.1| hypothetical protein alr4543 [Nostoc sp. PCC 7120]
 gi|17133679|dbj|BAB76242.1| alr4543 [Nostoc sp. PCC 7120]
          Length = 504

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 11/235 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           L N+   L+ A  N  P   L+D +TG    +    +    AS  K+      F  +   
Sbjct: 194 LKNVVQQLATATPNLSPGVFLVDLDTGG-YVDINAANALPAASTIKIPILVAFFQDVDAG 252

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           K  L   +T+ +        N  +K   T      +   ++  +++ A  +  +     +
Sbjct: 253 KIRLDELLTMKQEMVAGGSGNFQYKPAGTQYPALEVATKMITISDNTATNMLITRLGGME 312

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
                +N   ++ GL+ T   N    +   + T+ +++  +   +       M     + 
Sbjct: 313 A----LNERFRSWGLTNTVIRNILPDLPGTNTTSPKELGNIMTMVSQGNLVSMRS---RD 365

Query: 193 LEIKGKKYPNTNWAVGTFLGADGM---KTGFTCASGFNIVASAIQGDQSLIAVIL 244
             +   +    +  + + LGA      KTG       +         +  +  ++
Sbjct: 366 QILDIMRQTERDNLLPSGLGAGARVYHKTGDIGTMLADAGLIDTPTGKRYVVAVM 420


>gi|146260061|gb|ABQ14386.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEEHFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGKRGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|164449662|gb|ABY56290.1| beta-lactamase SHV-63 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ +      L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGENVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTNQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|21464496|gb|AAM52215.1| class A beta-lactamase TEM-107 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G +      I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGASERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|319639381|ref|ZP_07994131.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria mucosa C102]
 gi|317399276|gb|EFV79947.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria mucosa C102]
          Length = 470

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
          +   I+ ++++    P  ++             + + ++G VI E+  D   NPAS  KL
Sbjct: 2  KLKNILLISLMVAACPSWALDFGRIPENEISVYVQELDSGKVIVEHRADELRNPASTMKL 61

Query: 60 MTAYVVFSF 68
          +TA+  F  
Sbjct: 62 VTAFTAFRM 70


>gi|86438856|emb|CAJ70625.1| mutant amyA-blaM fusion protein [unidentified expression vector]
          Length = 744

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 501 GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 560

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 561 YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 620

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 621 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 680

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 681 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 737


>gi|125658584|gb|ABN49111.1| beta-lactamase SHV-94 [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQHLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|323710416|gb|ADY02609.1| beta-lactamase blaTEM [Shigella sonnei]
 gi|323710418|gb|ADY02610.1| beta-lactamase blaTEM [Shigella flexneri 3b]
 gi|323710420|gb|ADY02611.1| beta-lactamase blaTEM [Shigella flexneri 1a]
 gi|323710422|gb|ADY02612.1| beta-lactamase blaTEM [Shigella flexneri 4a]
          Length = 252

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 64/217 (29%), Gaps = 3/217 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 27  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 86

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 87  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 146

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 147 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 206

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVI 243
                    K+G        I+A+     +   I VI
Sbjct: 207 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVI 243


>gi|256367760|ref|YP_003108317.1| beta-lactamase TEM precursor [Escherichia coli]
 gi|228480697|gb|ACQ42024.1| beta-lactamase TEM precursor [Escherichia coli]
          Length = 242

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 64/217 (29%), Gaps = 3/217 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 15  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 74

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 75  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 134

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 135 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 194

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVI 243
                    K+G        I+A+     +   I VI
Sbjct: 195 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVI 231


>gi|146260211|gb|ABQ14433.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 78/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESLRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N      S +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSSVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|146260127|gb|ABQ14403.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 25/259 (9%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G            A 
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSG------------AG 228

Query: 234 QGDQSLIAVILGALDRNTR 252
           +     I   LG   + +R
Sbjct: 229 ERGSRGIIAALGPDSKPSR 247


>gi|86609350|ref|YP_478112.1| carboxylesterase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557892|gb|ABD02849.1| carboxylesterase, beta-lactamase family [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 426

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 68/230 (29%), Gaps = 12/230 (5%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              L+             +  TG   A   PD  +  AS+ K+      F  ++  +  L
Sbjct: 162 LAALADQPGLTA-GALFWEVETGAF-AGVRPDQAFPAASVIKIPILLAFFQAVETGQVRL 219

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
              +T+ ++           +   +         L++  +++ A  +            +
Sbjct: 220 DEQLTLREDLKGGGAGVLQTRPLGSQVSALEAATLMITLSDNFATNLI----IDRLGGQE 275

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
            +N   +  GL  T    +  +      + ++ RDM  L               + + L+
Sbjct: 276 TLNQKFRQWGLQHTQI--SWWLPDLEGTNTSSPRDMVWLLS-QVEQGRMLNRRSRDRFLD 332

Query: 195 IKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVI 243
           I  +    + +            KTG   +   +     +   +  +A +
Sbjct: 333 ILWRTQRLSYFRPNLGQEVRIAHKTGTLGSVVGDAGILDLPNGRRYVAAV 382


>gi|172037901|ref|YP_001804402.1| hypothetical protein cce_2988 [Cyanothece sp. ATCC 51142]
 gi|171699355|gb|ACB52336.1| hypothetical protein cce_2988 [Cyanothece sp. ATCC 51142]
          Length = 413

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 75/269 (27%), Gaps = 11/269 (4%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +     K   +  +D + G          P   AS  K+      F  + +    L   +
Sbjct: 151 AKYPNVKPQAWF-MDLDNGA-YVTYNGTQPVPAASTIKIPVLVAFFQEVDKGNMHLDQML 208

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           T++K+       +  + +         +   ++  +++ A  +            + +N 
Sbjct: 209 TMTKDVMVSGSGDMQYMQVDKKFPAIEVATKMIVISDNTATEMLIKQI----GGKEVLNQ 264

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
             K  G+  T   N    ++  + T++ D++ L  RI+                ++G + 
Sbjct: 265 RFKEWGMKHTEIHNILPDLEGTNKTSSEDLSKLLARIERGDLISTRSRDRLIAIMEGTRT 324

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRNKV 255
                           KTG       +     +   +  I  +            +  + 
Sbjct: 325 RTLLPQGLEKQANIAHKTGDIGTIIGDAGIIDMPTGKRYIGAVFAERAYNDPAGRSLIQD 384

Query: 256 SASLLSMGFYNKTDRKKINYIIKDFYQQN 284
            +  +   F     R     I      Q+
Sbjct: 385 ISRTVYQHFKYYQPRPVPKVIENKPESQS 413


>gi|94502830|gb|ABF29644.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 287

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGVEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|30230495|gb|AAP20890.1| extended-spectrum beta-lactamase SHV-48 [Acinetobacter baumannii]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLHKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|73665388|gb|AAZ79401.1| beta-lactamase [Klebsiella pneumoniae]
 gi|146336927|gb|ABQ23577.1| LEN-17 [Staphylococcus epidermidis]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGVEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|290509632|ref|ZP_06549003.1| beta-lactamase [Klebsiella sp. 1_1_55]
 gi|289779026|gb|EFD87023.1| beta-lactamase [Klebsiella sp. 1_1_55]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|197724689|emb|CAP12346.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 64/257 (24%), Gaps = 13/257 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTGAGERGARG 240

Query: 228 IVASAIQGDQSLIAVIL 244
           IVA      +    V+L
Sbjct: 241 IVALLGPDGKPERIVVL 257


>gi|15721855|gb|AAK69830.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 52.3 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGVEQLDRRIHYRQQDLVDYSPVSEKHLVDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|86450762|gb|ABC96711.1| TEM-149 beta-lactamase [Enterobacter aerogenes]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGVRGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|6457305|gb|AAF09467.1|AF179627_2 Amp [Expression vector pCENEX645]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 70/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V   +   +  L   I  S+N    
Sbjct: 43  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLFRIDAGQEQLGRRIHYSQNDLVE 102

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 103 YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 162

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 163 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 222

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 223 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|288935596|ref|YP_003439655.1| beta-lactamase [Klebsiella variicola At-22]
 gi|288890305|gb|ADC58623.1| Beta-lactamase [Klebsiella variicola At-22]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 64/257 (24%), Gaps = 13/257 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLVDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTGAGERGARG 240

Query: 228 IVASAIQGDQSLIAVIL 244
           IVA      +    V+L
Sbjct: 241 IVALLGPDGKPERIVVL 257


>gi|74058441|gb|AAZ98828.1| SHV type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLTSGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|74422853|gb|ABA06587.1| mutant extended-spectrum beta-lactamase SHV-65 [Klebsiella
           pneumoniae]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCT 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|197724693|emb|CAP12348.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLTDGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|75462898|sp|Q9AHN9|BLA29_KLEPN RecName: Full=Beta-lactamase SHV-29; Flags: Precursor
 gi|12247466|gb|AAG49894.1|AF301532_1 beta-lactamase SHV-29 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGSVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AAERGARGIVALLGPNNKAER 253


>gi|146260080|gb|ABQ14390.1| beta-lactamase [uncultured soil bacterium]
 gi|146260110|gb|ABQ14398.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 77/273 (28%), Gaps = 18/273 (6%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L            +      TT       
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNE--AIPNGERDTTMPVAMAT 178

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCASGFNIVAS 231
           + R            + + ++                        K+G        I+A+
Sbjct: 179 TLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAA 238

Query: 232 AIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                +   I VI     + T ++ +  +  +G
Sbjct: 239 LGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|260578436|ref|ZP_05846350.1| PBP4 family D-alanyl-D-alanine carboxypeptidase, serine-type
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603458|gb|EEW16721.1| PBP4 family D-alanyl-D-alanine carboxypeptidase, serine-type
           [Corynebacterium jeikeium ATCC 43734]
          Length = 444

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 3/49 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT---AYVVFSFL 69
               +   ++ D  TG V+     +    PAS TKL T   A +     
Sbjct: 73  PALGVLSASVTDVETGEVLWAKDENRKLTPASSTKLYTAAAAILALDED 121


>gi|256372037|ref|YP_003109861.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidimicrobium
           ferrooxidans DSM 10331]
 gi|256008621|gb|ACU54188.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Acidimicrobium
           ferrooxidans DSM 10331]
          Length = 414

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 98/246 (39%), Gaps = 21/246 (8%)

Query: 20  LSIAETNKLP----YYTLLDT-NTGHVIAENYPDHP-WNPASLTKLMTAYVVFSFLKEKK 73
              A            T++    +G    E  P       ASL KLMTA +V        
Sbjct: 55  APTAPPITFKHGVQSATVIPALGSGS--LEASPHERPVPIASLAKLMTALIVVRRHPLGS 112

Query: 74  AMLTTPITISKNASE-------YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                 +T++               S      G  +     L+ L+V+SAN+IA  +A  
Sbjct: 113 TASGPTLTMTPADVILSDVDVAEDQSTVPITAGERLNERQLLEALLVRSANNIATILATW 172

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
           +  +E  FV  MN T++ +GL+ THF +A G       +TARD+AI++ R++ +      
Sbjct: 173 VAGSESAFVATMNATARTMGLTGTHFADASGF-NKATVSTARDVAIVTARVEDNPTLAAI 231

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA----IQGDQSLIAV 242
             +           PN   A+GT     G+K+GFT  SG     +       G+ + + V
Sbjct: 232 ASEHAVTLPGAGTLPNIIQAIGTGD-VVGVKSGFTIWSGGCASIAVRTPTPVGELTSVGV 290

Query: 243 ILGALD 248
           ++G   
Sbjct: 291 VIGEQG 296


>gi|218437495|ref|YP_002375824.1| beta-lactamase protein [Cyanothece sp. PCC 7424]
 gi|218170223|gb|ACK68956.1| putative beta-lactamase protein [Cyanothece sp. PCC 7424]
          Length = 440

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 75/264 (28%), Gaps = 13/264 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
           P    +D + G  I +     P++ AS  K+      F  +   K  L   + ++K+   
Sbjct: 159 PGSFFVDLDNGAYI-DVNGQAPFSAASTIKIPVLVAFFEDVDAGKIYLDEELVMTKDVIG 217

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
               +  ++            L      N I+   A ++        + +N   K  GL+
Sbjct: 218 SGSGDMQYQPV----GKKYSALETAAKMNIISDNTATNMLIKRLGGKEALNERFKAWGLT 273

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
            T   N    ++  + T+ RD+A L  R+       +         ++  K         
Sbjct: 274 QTVINNPLPDLEGTNTTSPRDLAYLLARVNQGEILSLRSRDRLMGIMQKTKTRTLLPQGI 333

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRNKVSASLLSMG 263
                   KTG       +     +   +  +  +L           T  +  +  +   
Sbjct: 334 EKDAIIAHKTGDIGTVLGDAGIIDMPTGKRYVGAVLVKRPHNDYSARTLIQDISRTV--- 390

Query: 264 FYNKTDRKKINYIIKDFYQQNLSN 287
           + +         I      Q    
Sbjct: 391 YQHFKWYIPRPKIEPQITNQPSPE 414


>gi|321173612|gb|ADW77562.1| blaLEN-25 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 63/257 (24%), Gaps = 13/257 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       M +     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLVDGMAIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTGAGERGARG 240

Query: 228 IVASAIQGDQSLIAVIL 244
           IVA      +    V+L
Sbjct: 241 IVALLGPDGKPERIVVL 257


>gi|89072562|ref|ZP_01159134.1| hypothetical
          D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Photobacterium sp. SKA34]
 gi|89051666|gb|EAR57119.1| hypothetical
          D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Photobacterium sp. SKA34]
          Length = 467

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETN------KLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
          ++      +A   + F   S  +            + +++  T  +I     D    PAS
Sbjct: 3  KKLFCSALIATSFSSFAAFSPQQAIEHLPKGSDVAFLVVNPATNKIIYSKRADELQAPAS 62

Query: 56 LTKLMTAYVV 65
            K++TA   
Sbjct: 63 TQKMITALAA 72


>gi|298372227|ref|ZP_06982217.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275131|gb|EFI16682.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroidetes oral taxon 274 str. F0058]
          Length = 470

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
          +R+  +++A+    N     S A         + D  TG        D    PAS+TKL+
Sbjct: 4  IRRLFLLVAIVFYGNTLLPQSSAYQKL--SLIMTDLETGETFVNKNGDQLLTPASITKLI 61

Query: 61 TAYVVFS 67
          T      
Sbjct: 62 TTATALE 68


>gi|262044380|ref|ZP_06017443.1| beta-lactamase shv-5 [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259038268|gb|EEW39476.1| beta-lactamase shv-5 [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGLNNKAER 253


>gi|146260009|gb|ABQ14367.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 9/267 (3%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 5   FFAAFCLPVFALPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 64

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 65  LLCGAVLSRVDAGQEQLGRRIHYSQNGLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 124

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
           A  +  ++   ++   F+ +M +    L         A    +            L   +
Sbjct: 125 ANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTMPVAMATTLRKLL 184

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
             +        Q+       K       +          K+G        I+A+     +
Sbjct: 185 TGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGLDGK 244

Query: 238 S-LIAVILGALDRNTRNKVSASLLSMG 263
              I VI     + T ++ +  +  +G
Sbjct: 245 PSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|77021517|gb|ABA60617.1| TEM extended-spectrum beta-lactamase [Shigella flexneri]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNGGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|60594088|pdb|1XXM|A Chain A, The Modular Architecture Of Protein-Protein Binding Site
 gi|60594090|pdb|1XXM|B Chain B, The Modular Architecture Of Protein-Protein Binding Site
          Length = 263

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVA 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  ASPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +      A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|75451268|sp|Q93LM8|BLA34_ECOLX RecName: Full=Beta-lactamase SHV-34; Flags: Precursor
 gi|14532427|gb|AAK64187.1| extended spectrum beta-lactamase SHV-34 [Escherichia coli]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 69/259 (26%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGSVGMIEMDLASGRTLTAWRADG 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG +      
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNKAERIVVIYL 259


>gi|313510884|gb|ADR66517.1| beta-lactamase SHV-135 [Escherichia coli]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  K                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLKQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMTATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|297155635|gb|ADI05347.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Streptomyces
          bingchenggensis BCW-1]
          Length = 525

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 28 LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
               + D ++G V+ +++PD    PAS TKL T+    
Sbjct: 52 AAGVVVADADSGAVLYQHHPDDRLMPASNTKLFTSAAAM 90


>gi|315419959|gb|ADU15837.1| BlaSHV132 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMLSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|46276337|gb|AAS86427.1| inhibitor-resistant TEM beta-lactamase [Escherichia coli]
          Length = 232

 Score = 51.9 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 52/173 (30%), Gaps = 13/173 (7%)

Query: 8   IAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
           +     +   P  +  ET                Y  LD N+G ++    P+  +   S 
Sbjct: 1   LIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V S +   +  L   I  S+N        +       MT+       I  S 
Sbjct: 61  FKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSD 120

Query: 117 NDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
           N  A  +  ++   ++   F+ +M +    L         A    +      A
Sbjct: 121 NTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPA 173


>gi|61741615|gb|AAX54694.1| beta-lactamase CTX-M-39 [Escherichia coli]
          Length = 291

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 81/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M A  V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAAAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGDYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|330830381|ref|YP_004393333.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Aeromonas veronii B565]
 gi|328805517|gb|AEB50716.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Aeromonas veronii B565]
          Length = 479

 Score = 51.9 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
          M++ L+       S       +       Y  ++  N G V    + D    PAS  K++
Sbjct: 1  MQRLLIGFCALFSSLAAHAAPLTPPQGGQYAIMVQGNNG-VEFARHADQMIAPASTMKVL 59

Query: 61 TAYVV 65
          TA   
Sbjct: 60 TALAA 64


>gi|225024676|ref|ZP_03713868.1| hypothetical protein EIKCOROL_01558 [Eikenella corrodens ATCC
          23834]
 gi|224942565|gb|EEG23774.1| hypothetical protein EIKCOROL_01558 [Eikenella corrodens ATCC
          23834]
          Length = 475

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMT 61
          + L+  A+     +   +             + D ++G V+  +  D   NPAS  KL+T
Sbjct: 14 RLLLTFALFFYFQVAFAIDFGRIQPDEAAVYVQDLDSGEVLLAHRADVSMNPASTMKLVT 73

Query: 62 AYVVFS 67
           +    
Sbjct: 74 TFAALR 79


>gi|76363886|sp|P0A9Z8|BLA2_KLEPN RecName: Full=Beta-lactamase SHV-2; AltName: Full=SHV-2A; Flags:
           Precursor
 gi|76363888|sp|P0AA00|BLA2_SALTY RecName: Full=Beta-lactamase SHV-2; AltName: Full=SHV-2A; Flags:
           Precursor
 gi|96567|pir||S16146 beta-lactamase (EC 3.5.2.6) 2A precursor - Klebsiella pneumoniae
           plasmids
 gi|320431|pir||A60679 beta-lactamase (EC 3.5.2.6) SHV-2 precursor - Salmonella
           typhimurium plasmid pHT1
 gi|18656790|gb|AAL77980.1|AF462393_1 extended-spectrum beta-lactamase SHV-2a [Klebsiella pneumoniae]
 gi|43796|emb|CAA37813.1| beta-lactamase [Klebsiella pneumoniae]
 gi|972891|gb|AAA75015.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|1185123|emb|CAA59058.1| beta-lactamase SHV-2a [Klebsiella pneumoniae]
 gi|2113849|emb|CAA66730.1| beta-lactamase SHV-2a [Klebsiella pneumoniae]
 gi|3342495|gb|AAC27624.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|114804330|gb|ABI81407.1| beta-lactamase SHV-2a [Enterobacter cloacae]
 gi|191174843|emb|CAQ43038.1| beta-lactamase class A SHV-2a [Pseudomonas aeruginosa]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG +      
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNKAERIVVIYL 259


>gi|301059978|ref|ZP_07200852.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [delta proteobacterium NaphS2]
 gi|300445857|gb|EFK09748.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [delta proteobacterium NaphS2]
          Length = 418

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 13/81 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------LLDTNTGHVIAENYPD 48
          +++++ +     L  I          K   +             LL T  G V+ E   D
Sbjct: 12 LKKWVSLSCAFFLCQILILF-YPHGAKAKKWLPCNQQIKTTDSFLLATPQGKVLFEKNAD 70

Query: 49 HPWNPASLTKLMTAYVVFSFL 69
              PAS  K++T+       
Sbjct: 71 KQRVPASTLKILTSLAALDHF 91


>gi|22725669|gb|AAN04882.1| beta-lactamase SHV-40 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGGRGIVALLGPNNKAER 253


>gi|218091988|emb|CAP58290.1| beta-lactamase [Klebsiella pneumoniae]
 gi|223635897|emb|CAQ03506.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRFIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG +      
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNKAERIVVIYL 259


>gi|294813214|ref|ZP_06771857.1| putative penicillin-binding exported protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326441674|ref|ZP_08216408.1| d-alanyl-d-alanine
           carboxypeptidase/d-alanyl-d-alanine-endopeptidase
           [Streptomyces clavuligerus ATCC 27064]
 gi|294325813|gb|EFG07456.1| putative penicillin-binding exported protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 549

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
              + D  TG  + +   D    PAS TK++T+    
Sbjct: 70  SVVVADAVTGERLYQRNADDRLVPASNTKIVTSIAAM 106


>gi|224223446|gb|ACN39713.1| SHV-type beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWKTELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|254393705|ref|ZP_05008828.1| penicillin binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197707315|gb|EDY53127.1| penicillin binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 581

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
              + D  TG  + +   D    PAS TK++T+    
Sbjct: 102 SVVVADAVTGERLYQRNADDRLVPASNTKIVTSIAAM 138


>gi|22725671|gb|AAN04883.1| beta-lactamase SHV-41 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATFGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|146260089|gb|ABQ14392.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----------KLP-YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +  +  +   P  +  ET                Y  LD N+G ++    P   +   S
Sbjct: 1   ALIPSFAAFCLPVFAHPETLVKVKDAGDQLGARVGYIELDLNSGKILESFRPKERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|190576908|ref|YP_001966240.1| blaSHV2A extended spectrum beta-lactamase SHV-2 [Klebsiella
           pneumoniae]
 gi|76363885|sp|P0A9Z7|BLA2_ECOLX RecName: Full=Beta-lactamase SHV-2; AltName: Full=SHV-2A; Flags:
           Precursor
 gi|76363887|sp|P0A9Z9|BLA2_KLEPO RecName: Full=Beta-lactamase SHV-2; AltName: Full=SHV-2A; Flags:
           Precursor
 gi|5002314|gb|AAD37413.1|AF148851_1 beta-lactamase SHV-2 [Escherichia coli]
 gi|12034666|gb|AAG45956.1|AF282921_2 SHV-2 extended spectrum beta-lactamase [Shigella flexneri]
 gi|43790|emb|CAA37524.1| unnamed protein product [Klebsiella pneumoniae subsp. ozaenae]
 gi|48990|emb|CAA44025.1| SHV2A beta-lactamase [Klebsiella pneumoniae]
 gi|150489|gb|AAA25526.1| beta-lactamase [Plasmid pBP60-1]
 gi|37654370|gb|AAQ96282.1| extended-spectrum beta-lactamase SHV-2 [Klebsiella pneumoniae]
 gi|51105093|gb|AAT97106.1| extended-spectrum beta-lactamase SHV-2 [Klebsiella pneumoniae]
 gi|51105095|gb|AAT97107.1| extended-spectrum beta-lactamase SHV-2 [Klebsiella pneumoniae]
 gi|51105099|gb|AAT97109.1| extended-spectrum beta-lactamase SHV-2 [Klebsiella pneumoniae]
 gi|51105105|gb|AAT97112.1| extended-spectrum beta-lactamase SHV-2 [Escherichia coli]
 gi|51105109|gb|AAT97114.1| extended-spectrum beta-lactamase SHV-2 [Klebsiella pneumoniae]
 gi|110264492|gb|ABG56855.1| blaSHV2A extended spectrum beta-lactamase SHV-2 [Klebsiella
           pneumoniae]
 gi|166092032|gb|ABY82053.1| beta-lactamase SHV-2 [Escherichia coli]
 gi|257043750|gb|ACV33203.1| beta-lactamase blaSHV-2a [Klebsiella pneumoniae]
 gi|262477943|gb|ACY68241.1| beta-lactamase blaSHV-2a [Klebsiella pneumoniae]
 gi|293652428|gb|ADE60794.1| beta-lactamase SHV-2 [Enterobacter aerogenes]
 gi|295917912|gb|ADG60243.1| BlaSHV-2 [Escherichia coli]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG +      
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNKAERIVVIYL 259


>gi|164665324|gb|ABY66124.1| SHV-like beta-lactamase [Escherichia coli]
          Length = 283

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A       I  +LG  ++  R
Sbjct: 233 ----ASXRGARGIVALLGPNNKAER 253


>gi|86438858|emb|CAJ70627.1| mutant amyA-blaM fusion protein [unidentified expression vector]
          Length = 455

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 71/237 (29%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 212 GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 271

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 272 YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 331

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 332 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 391

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 392 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 448


>gi|9257166|pdb|1CK3|A Chain A, N276d Mutant Of Escherichia Coli Tem-1 Beta-Lactamase
          Length = 263

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 71/236 (30%), Gaps = 6/236 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
                    K+G        I+A+     +   I VI   G+    + R++  A +
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERDRQIAEI 255


>gi|165972122|dbj|BAF99008.1| beta-lactamase SHV [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ +++    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIDDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|317446360|emb|CBW46935.1| extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 81/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M A  V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAAAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGGYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|66220180|gb|AAY43008.1| beta-lactamase CTX-M-41 [Proteus mirabilis]
          Length = 291

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 82/292 (28%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M A  V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAAAAVLKQSETQKGLLSQRVEIKPSDLVNYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT    +   +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELIAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGGYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|15721851|gb|AAK69828.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            +I  S N  A  +            F++ +++    L    T    A         T A
Sbjct: 121 AVITMSDNSAANLLLATVGGPAGLTAFLRQIDDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|25029101|ref|NP_739155.1| putative D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           efficiens YS-314]
 gi|259505901|ref|ZP_05748803.1| penicillin-binding protein, D-ala-D-ala carboxypeptidase
           [Corynebacterium efficiens YS-314]
 gi|23494388|dbj|BAC19355.1| putative D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           efficiens YS-314]
 gi|259166505|gb|EEW51059.1| penicillin-binding protein, D-ala-D-ala carboxypeptidase
           [Corynebacterium efficiens YS-314]
          Length = 421

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 21/44 (47%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           DT TG VI    PD P  PAS TK++TA      L     + T 
Sbjct: 83  DTATGEVIWSQNPDTPVRPASATKILTAAAALYELGWDDTIHTD 126


>gi|159576920|dbj|BAF92780.1| beta-lactamase SHV-60 [Klebsiella pneumoniae]
 gi|160858184|emb|CAI30649.2| beta-lactamase SHV-60 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMTATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|9858194|gb|AAG01039.1|AF293345_1 SHV-27 beta lactamase [Klebsiella pneumoniae]
 gi|221149266|gb|ACM04457.1| SHV-27 beta-lactamase [Klebsiella pneumoniae]
 gi|225697591|gb|ACO07068.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ +++    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIDDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|160948455|emb|CAJ47135.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPTGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|46309224|emb|CAG25835.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 57/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +   +L    T 
Sbjct: 93  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTHLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|11364578|gb|AAC32889.2| beta-lactamase TEM-43 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 81/274 (29%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +    T A   
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDHWEPELNEAIPNDERDTTTPAAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|74422859|gb|ABA06590.1| mutant extended-spectrum beta-lactamase SHV-69 [Klebsiella
           pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLTDGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|282852262|ref|ZP_06261608.1| beta-lactamase [Lactobacillus gasseri 224-1]
 gi|282556591|gb|EFB62207.1| beta-lactamase [Lactobacillus gasseri 224-1]
          Length = 257

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 8/174 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPAS 55
           R + +  A  +     P          +       Y  LD N+G ++    P+  +   S
Sbjct: 39  RPYSLFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 98

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 99  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 158

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            N  A  +  ++   ++   F+ +M +    L         A    +       
Sbjct: 159 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPV 212


>gi|211774526|gb|ABV57756.3| beta-lactamase blaCTX-M [Klebsiella pneumoniae]
          Length = 291

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLEQSETQKQLLNQPVEIQPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S +     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDHTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|30984107|gb|AAP41108.1| beta-lactamase SHV-50 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +          +    +  +       +V         KTG        
Sbjct: 181 SMTATLRKLLTSQRLSARSQRHLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|146260068|gb|ABQ14388.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 13/174 (7%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            N  A  +  ++   ++   F+ +M +    L         A    + G     
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERGTTMPV 174


>gi|160948457|emb|CAJ47136.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGSPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|65994176|gb|AAY42633.1| beta-lactamase SHV-70 [Enterobacter cloacae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGVTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|9910644|sp|O08337|BLA8_ECOLX RecName: Full=Beta-lactamase SHV-8; Flags: Precursor
 gi|1928922|gb|AAB51384.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARNTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|146260059|gb|ABQ14385.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I   +N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYPQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|7109289|gb|AAF36719.1|AF227204_1 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMTATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|146260207|gb|ABQ14431.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 52/182 (28%), Gaps = 13/182 (7%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SW 175
             
Sbjct: 181 RR 182


>gi|56463109|gb|AAV91696.1| beta-lactamase TEM [Escherichia coli]
          Length = 178

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 2/154 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 21  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 80

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 81  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 140

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
                  A    +      A     L   +  D+
Sbjct: 141 WEPELNEAIPNDERDTTMPAAMATTLRKLLTGDW 174


>gi|72163302|ref|YP_290959.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Thermobifida fusca
           YX]
 gi|71917034|gb|AAZ56936.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Thermobifida fusca
           YX]
          Length = 464

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 15/37 (40%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
              ++D  T   +     D    PAS TK++T+    
Sbjct: 82  SAYVIDAETHQELYARDADEGLVPASTTKVVTSVAAL 118


>gi|9910661|sp|Q9S169|BLA24_ECOLX RecName: Full=Beta-lactamase SHV-24; Flags: Precursor
 gi|6009582|dbj|BAA84973.1| beta-lactamase [Escherichia coli]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A      G  T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARGTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|168703612|ref|ZP_02735889.1| serine-type D-Ala-D-Ala carboxypeptidase [Gemmata obscuriglobus
          UQM 2246]
          Length = 520

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 19 FLSIAETNKLPYY--TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++ A   K   +   ++D  TG  +    PD    PAS+TKL T     
Sbjct: 35 AITGAPDYKHASWGILIVDAKTGGTVYARNPDAMLAPASVTKLFTCAAAL 84


>gi|160948453|emb|CAJ47134.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T              T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEVLPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|29893408|gb|AAP03063.1| SHV-48 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|10945348|gb|AAG24519.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
          Length = 260

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|9910630|sp|Q9S424|BLA13_KLEPN RecName: Full=Beta-lactamase SHV-13; Flags: Precursor
 gi|5457154|gb|AAD43815.1|AF164577_1 beta lactamase SHV-13 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AAERGARGIVALLGPNNKAER 253


>gi|152970159|ref|YP_001335268.1| beta-lactamase SHV-11 [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238894633|ref|YP_002919367.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae
           NTUH-K2044]
 gi|2113851|emb|CAA66729.1| beta-lactamase SHV-1a [Klebsiella pneumoniae]
 gi|3808170|emb|CAA77111.1| beta-lactamase [Shigella dysenteriae]
 gi|31096318|gb|AAP43779.1| beta-lactamase SHV-11 [Escherichia coli]
 gi|46452172|gb|AAS98183.1| beta-lactamase [Klebsiella pneumoniae]
 gi|77702544|gb|ABB01157.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|77702546|gb|ABB01158.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|77702550|gb|ABB01160.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|77702552|gb|ABB01161.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|77702554|gb|ABB01162.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|85003007|gb|AAZ98824.3| SHV type extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|85003009|gb|AAZ98827.3| SHV type extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|85068489|gb|AAZ98825.3| SHV type extended spectrum beta-lactamase [Escherichia coli]
 gi|112785124|gb|ABI20752.1| SHV extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|124053903|gb|ABM89158.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053905|gb|ABM89159.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053909|gb|ABM89161.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053911|gb|ABM89162.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053913|gb|ABM89163.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053915|gb|ABM89164.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|150955008|gb|ABR77038.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|166092028|gb|ABY82051.1| beta-lactamase SHV-11 [Escherichia coli]
 gi|221149261|gb|ACM04455.1| SHV-11 beta-lactamase [Klebsiella pneumoniae]
 gi|225697589|gb|ACO07067.1| beta-lactamase [Klebsiella pneumoniae]
 gi|225907196|gb|ACO36248.1| beta-lactamase SHV-11 [Proteus mirabilis]
 gi|238546949|dbj|BAH63300.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|256594258|gb|ACV03882.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|256862160|gb|ACV32618.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|256862162|gb|ACV32619.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|256862164|gb|ACV32620.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|256862166|gb|ACV32621.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|256862168|gb|ACV32622.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|256862170|gb|ACV32623.1| beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|257043736|gb|ACV33196.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|257043748|gb|ACV33202.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|257043752|gb|ACV33204.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|257043754|gb|ACV33205.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|257043770|gb|ACV33213.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|257043778|gb|ACV33217.1| beta-lactamase bla-SHV-11 [Klebsiella pneumoniae]
 gi|257043800|gb|ACV33228.1| beta-lactamase bla-SHV-11 [Klebsiella pneumoniae]
 gi|257043804|gb|ACV33230.1| beta-lactamase bla-SHV-11 [Klebsiella pneumoniae]
 gi|259089728|gb|ACV91691.1| broad-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|259089737|gb|ACV91699.1| broad-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|262477921|gb|ACY68230.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477923|gb|ACY68231.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477925|gb|ACY68232.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477927|gb|ACY68233.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477929|gb|ACY68234.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477931|gb|ACY68235.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477935|gb|ACY68237.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|262477939|gb|ACY68239.1| beta-lactamase blaSHV-11 [Klebsiella pneumoniae]
 gi|281333460|gb|ADA61019.1| SHV-11 beta-lactamase [Klebsiella pneumoniae]
 gi|301133846|gb|ADK63437.1| SHV-11 beta-lactamase [Klebsiella pneumoniae]
 gi|313766524|gb|ADR80604.1| SHV-11 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|18482389|gb|AAL68926.1| beta-lactamase SHV-35 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.5 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDKQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGGRGIVALLGPNNKAER 253


>gi|10242338|gb|AAG15384.1|AF299299_1 beta-lactamase SHV-28 [Klebsiella pneumoniae]
 gi|23194362|gb|AAN15132.1| beta-lactamase SHV-28 [Klebsiella pneumoniae]
 gi|83272143|gb|ABC00739.1| beta-lactamase SHV-28 [Klebsiella pneumoniae]
 gi|167888215|gb|ACA09611.1| extended spectrum beta-lactamase SHV-28 [Klebsiella pneumoniae]
 gi|221149269|gb|ACM04458.1| SHV-28 beta-lactamase [Klebsiella pneumoniae]
 gi|313766530|gb|ADR80607.1| SHV-28 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRFIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|218091992|emb|CAP58292.1| beta-lactamase [Klebsiella pneumoniae]
 gi|223635901|emb|CAQ03508.1| beta-lactamase [Klebsiella pneumoniae]
 gi|313766528|gb|ADR80606.1| SHV-108 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLAIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|219958084|gb|ACL68096.1| beta-lactamase [Klebsiella pneumoniae]
 gi|300510894|gb|ADK25062.1| TEM beta-lactamase [Serratia marcescens]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 71/276 (25%), Gaps = 17/276 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + +   + +      +     +              Y  +D  +G  +A      
Sbjct: 1   MRYIRLCLFSLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLASGRTLAAWRASE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPLMSTFKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     + +          F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRG 240

Query: 228 IVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
           IVA      +   ++ + L         RN+  A +
Sbjct: 241 IVALLGPNGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|146260240|gb|ABQ14444.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 25/259 (9%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIRYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G            A 
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSG------------AG 228

Query: 234 QGDQSLIAVILGALDRNTR 252
           +     I   LG   + +R
Sbjct: 229 ERGSRGIITALGPDSKPSR 247


>gi|11527844|gb|AAG37024.1|AF277571_1 putative D,D-carboxypeptidase [Enterococcus faecium]
          Length = 91

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 190 IKGLEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            K    +   Y N+N      +        G+KTG +   G  +V++A+   ++ I V++
Sbjct: 11  EKWPNGREVTYNNSNELLDPNSPYYRPEVIGLKTGTSSLGGACVVSAAVIDGETYICVVM 70

Query: 245 GALDRNTRNKVSASLLS 261
           G+  + +R + S ++L 
Sbjct: 71  GS-TKESRFQDSVAILD 86


>gi|218684515|gb|ACL01091.1| SHV beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|218091981|emb|CAP58287.1| beta-lactamase [Klebsiella pneumoniae]
 gi|223635891|emb|CAQ03503.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|154269430|gb|ABS72342.1| extended-spectrum beta-lactamase SHV-102 [Escherichia coli]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AAERGARGIVALLGPNNKAER 253


>gi|134044832|ref|YP_001102238.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165937979|ref|ZP_02226539.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165937993|ref|ZP_02226553.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165940285|ref|ZP_02228812.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|330006575|ref|ZP_08305647.1| beta-lactamase [Klebsiella sp. MS 92-3]
 gi|83288403|sp|P0AD63|BLA1_ECOLX RecName: Full=Beta-lactamase SHV-1; AltName: Full=PIT-2; Flags:
           Precursor
 gi|83288404|sp|P0AD64|BLA1_KLEPN RecName: Full=Beta-lactamase SHV-1; AltName: Full=PIT-2; Flags:
           Precursor
 gi|223365818|pdb|3D4F|A Chain A, Shv-1 Beta-Lactamase Complex With Ln1-255
 gi|5002312|gb|AAD37412.1|AF148850_1 SHV-1 beta-lactamase [Escherichia coli HB101]
 gi|18656796|gb|AAL77983.1|AF462396_1 extended-spectrum beta-lactamase SHV-1 [Acinetobacter sp. SUN-72]
 gi|2113853|emb|CAA66727.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|2113855|emb|CAA66726.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|2113863|emb|CAA66728.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|4337048|gb|AAD18054.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|54661908|gb|AAV38100.1| beta-lactamase SHV-1b [Acinetobacter baumannii]
 gi|56181494|gb|AAV83794.1| broad-spectrum beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|74058437|gb|AAZ98826.1| SHV type extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|77702548|gb|ABB01159.1| extended-spectrum beta-lactamase SHV-11 [Klebsiella pneumoniae]
 gi|86278448|gb|ABC88472.1| bla-SHV type 1 [Klebsiella pneumoniae]
 gi|94502886|gb|ABF29674.1| beta-lactamase [Klebsiella pneumoniae]
 gi|124053917|gb|ABM89165.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053919|gb|ABM89166.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053921|gb|ABM89167.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|124053923|gb|ABM89168.1| SHV type beta lactamase [Klebsiella pneumoniae]
 gi|133905366|gb|ABO42128.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|161703205|gb|ABX76424.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|164665322|gb|ABY66123.1| SHV-like beta-lactamase [Escherichia coli]
 gi|165911792|gb|EDR30442.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165914002|gb|EDR32619.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165914016|gb|EDR32633.1| beta-lactamase [Yersinia pestis biovar Orientalis str. IP275]
 gi|221149258|gb|ACM04454.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
 gi|225697593|gb|ACO07069.1| beta-lactamase [Klebsiella pneumoniae]
 gi|238864064|gb|ACR66308.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|238864066|gb|ACR66309.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|238864070|gb|ACR66311.1| beta-lactamase SHV-1 [Raoultella terrigena]
 gi|238864074|gb|ACR66313.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|238864084|gb|ACR66318.1| beta-lactamase SHV-1 [Raoultella terrigena]
 gi|238864086|gb|ACR66319.1| beta-lactamase SHV-1 [Klebsiella oxytoca]
 gi|238864088|gb|ACR66320.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|238864092|gb|ACR66322.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|238864094|gb|ACR66323.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|238864102|gb|ACR66327.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|256033060|gb|ACU57153.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|256862158|gb|ACV32617.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|257043742|gb|ACV33199.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043744|gb|ACV33200.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043756|gb|ACV33206.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043760|gb|ACV33208.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043762|gb|ACV33209.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043764|gb|ACV33210.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043772|gb|ACV33214.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|257043774|gb|ACV33215.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043776|gb|ACV33216.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043780|gb|ACV33218.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043782|gb|ACV33219.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043784|gb|ACV33220.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043790|gb|ACV33223.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043792|gb|ACV33224.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043794|gb|ACV33225.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043798|gb|ACV33227.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043802|gb|ACV33229.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043806|gb|ACV33231.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|257043808|gb|ACV33232.1| beta-lactamase bla-SHV-1 [Klebsiella pneumoniae]
 gi|262212665|gb|ACY35991.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|262212667|gb|ACY35992.1| beta-lactamase SHV-1 [Klebsiella pneumoniae]
 gi|262477933|gb|ACY68236.1| beta-lactamase blaSHV-1 [Klebsiella pneumoniae]
 gi|313766522|gb|ADR80603.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
 gi|313766526|gb|ADR80605.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
 gi|313766532|gb|ADR80608.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
 gi|328535790|gb|EGF62226.1| beta-lactamase [Klebsiella sp. MS 92-3]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|158334967|ref|YP_001516139.1| beta-lactamase [Acaryochloris marina MBIC11017]
 gi|158305208|gb|ABW26825.1| beta-lactamase, putative [Acaryochloris marina MBIC11017]
          Length = 277

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 76/227 (33%), Gaps = 7/227 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             S A++   P    L+ +TG  + +       + AS  K+      F  +      L  
Sbjct: 20  AWSAAQSELKPAMFFLNPSTGEYL-DINGAKSISAASTIKIPVLLAFFEDVDAGIIDLDE 78

Query: 79  PITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           P+ +  +  +    S      G+T +  +  + +I  S N     + + L        + 
Sbjct: 79  PLVMRPDLVASEAGSMQYEPVGTTFSALDTAEYMIAISDNTATNMLIDRL-----GGAEK 133

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           +N   K+ GL  T   N    ++  +  + +DMA L  ++K +        +     ++ 
Sbjct: 134 LNQRFKSWGLKHTTIRNPLPDLEGTNTISPQDMAALMLKLKDEDLLSSTSREQALDILRQ 193

Query: 198 KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                              KTG   +   +I    +   Q  +A IL
Sbjct: 194 TVTNTLLPQGIEKDADIAHKTGDIGSVVGDIGLIDMPNGQHYVAAIL 240


>gi|84105059|gb|ABC54571.1| beta-lactamase SHV-85 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATMPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|67464385|pdb|1ZG6|A Chain A, Tem1 Beta Lactamase Mutant S70g
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 78/274 (28%), Gaps = 14/274 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
                K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMGTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             S N  A  +  ++   ++   F+ +M +    L         A    +          
Sbjct: 126 TMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMA 185

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   +  +        Q+       K       +          K+G        I+A
Sbjct: 186 TTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIA 245

Query: 231 SAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
           +     +   I VI     + T ++ +  +  +G
Sbjct: 246 ALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 279


>gi|25989460|gb|AAL79576.1| SHV-38 beta-lactamase [Klebsiella pneumoniae]
 gi|195954366|gb|ACG58890.1| extended spectrum beta lactamase SHV-38 [Klebsiella pneumoniae]
 gi|257043766|gb|ACV33211.1| beta-lactamase blaSHV-38 [Klebsiella pneumoniae]
 gi|257043768|gb|ACV33212.1| beta-lactamase blaSHV-38 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPVGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|228979140|ref|ZP_04139486.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
 gi|228780588|gb|EEM28809.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis Bt407]
          Length = 194

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-------- 210
                 TTA D A L+ R+  DFP  ++  ++   +   K     N     +        
Sbjct: 26  TNKQSTTTAIDAAKLAARLVKDFPDVLNITKLTSYQFTFKDSQVFNTNKMIYSLNENIKL 85

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
            G DG++T F+    ++ V++A  GD  LI+VIL A + N     +  LL  GF 
Sbjct: 86  QGVDGLQTSFSTNGNYSFVSTAKLGDTRLISVILDADEENISFIETKKLLQYGFD 140


>gi|146260227|gb|ABQ14439.1| beta-lactamase [uncultured soil bacterium]
 gi|146260237|gb|ABQ14443.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L      S+N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRTHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAADLLLATIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDRMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|315632435|gb|ADU53763.1| beta-lactamase TEM-1 [Haemophilus parasuis]
 gi|315632437|gb|ADU53764.1| beta-lactamase TEM-1 [Haemophilus parasuis]
          Length = 167

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 2   GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 61

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 62  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 121

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +      A
Sbjct: 122 WEPELNEAIPNDERDTTMPA 141


>gi|17887487|gb|AAL40899.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHFADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLSAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|311747403|ref|ZP_07721188.1| putative D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Algoriphagus sp. PR1]
 gi|311302649|gb|EAZ79074.2| putative D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Algoriphagus sp. PR1]
          Length = 432

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 14/75 (18%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKLPYYT--------------LLDTNTGHVIAENYP 47
          +   + +        +  L+  +  KL                  L D ++  V+ E   
Sbjct: 6  KILFIFLLFCFSQFSYGQLTRDQYLKLESALGDQSFFSKHLSGFELYDLDSQTVVFERNS 65

Query: 48 DHPWNPASLTKLMTA 62
          +  + PAS TKL T 
Sbjct: 66 EQRFIPASTTKLFTL 80


>gi|239909271|gb|ACS32294.1| extended spectrum beta-lactamase CTX-M-75 [Providencia stuartii]
          Length = 291

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 80/283 (28%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPDHP 50
             V+  +++L +     + A + +                 L++  +   ++     D  
Sbjct: 11  LTVMATLSLLFSSATLHAQANSVQQQLEALEKSSGGRLGVALINTADNSQILY--RADER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    +  K +L   + I K+        +      TMTL      
Sbjct: 69  FAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEKHVNGTMTLAELGAA 128

Query: 111 LIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +   L   +K   F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNTAIPGDPRDTTTPLA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A     +   L+ V         A  R      +A +++ GF
Sbjct: 249 IAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|125658594|gb|ABN49116.1| beta-lactamase SHV-77 [Escherichia coli]
 gi|160948449|emb|CAJ47132.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K+     V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVALCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|269128704|ref|YP_003302074.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Thermomonospora curvata DSM 43183]
 gi|268313662|gb|ACZ00037.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Thermomonospora curvata DSM 43183]
          Length = 459

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 19  FLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             ++A  +       ++D  T   +  +  D P  PAS TKL+T+    S L    
Sbjct: 74  LAALASGSGAEISAVVIDARTRRTLFAHRADRPAVPASTTKLVTSVAALSALGPHH 129


>gi|399118|sp|P30896|BLA3_KLEPN RecName: Full=Beta-lactamase SHV-3; Flags: Precursor
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 68/259 (26%), Gaps = 15/259 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG +      
Sbjct: 181 SMAATLRKLLTSQRLSARSQLQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARG 240

Query: 228 IVASAIQGDQ--SLIAVIL 244
           IVA     ++   ++ + L
Sbjct: 241 IVALLGPNNKAERIVVIYL 259


>gi|125658586|gb|ABN49112.1| beta-lactamase SHV-96 [Acinetobacter baumannii]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDARVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|15131526|emb|CAB37325.2| Beta-lactamase [Escherichia coli]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    + + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAMLARVDAGDKQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|288190912|gb|ADC43818.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190914|gb|ADC43819.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190916|gb|ADC43820.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190920|gb|ADC43822.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190922|gb|ADC43823.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190924|gb|ADC43824.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190926|gb|ADC43825.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190928|gb|ADC43826.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190930|gb|ADC43827.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190932|gb|ADC43828.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190934|gb|ADC43829.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190936|gb|ADC43830.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190938|gb|ADC43831.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190940|gb|ADC43832.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190942|gb|ADC43833.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|288190944|gb|ADC43834.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603823|gb|ADE20189.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603825|gb|ADE20190.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603827|gb|ADE20191.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603829|gb|ADE20192.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603831|gb|ADE20193.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603833|gb|ADE20194.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603835|gb|ADE20195.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
 gi|291603837|gb|ADE20196.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
          Length = 212

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 25  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 84

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 85  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 144

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +      A
Sbjct: 145 WEPELNEAIPNDERDTTMPA 164


>gi|160948435|emb|CAJ47127.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR F + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYFRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPVGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         +TG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADRTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|160858188|emb|CAI30651.2| beta-lactamase SHV-62 [Klebsiella pneumoniae]
 gi|262477945|gb|ACY68242.1| beta-lactamase blaSHV-62 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKYLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|89475516|gb|ABD73290.1| beta-lactamase CTX-M-59 [Klebsiella pneumoniae]
 gi|186920241|gb|ACC95405.1| CTX-M-59 [Klebsiella pneumoniae]
 gi|225579650|gb|ACN93994.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579652|gb|ACN93995.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579654|gb|ACN93996.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579656|gb|ACN93997.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579666|gb|ACN94002.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579670|gb|ACN94004.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579672|gb|ACN94005.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579676|gb|ACN94007.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579680|gb|ACN94009.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579682|gb|ACN94010.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579694|gb|ACN94016.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579704|gb|ACN94021.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579718|gb|ACN94028.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
 gi|225579736|gb|ACN94037.1| beta-lactamase blaCTX-M-59 [Klebsiella pneumoniae]
          Length = 291

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKLLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|46309226|emb|CAG25836.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGVEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLTDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|89069277|ref|ZP_01156640.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Oceanicola granulosus HTCC2516]
 gi|89045153|gb|EAR51221.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Oceanicola granulosus HTCC2516]
          Length = 516

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + D  TG +I     D    PAS+TK MTA     
Sbjct: 73  SAAVADIETGELIEGYAADEGLPPASVTKAMTALYALE 110


>gi|300390458|gb|ADK11041.1| extended-spectrum beta-lactamase CTX-M-94 [Escherichia coli]
          Length = 291

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 82/292 (28%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M A  V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAAAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTLGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGGYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|146260169|gb|ABQ14415.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILKSFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I   +N        +       MT+       I  S
Sbjct: 61  TFKVLLCGAVLSRIDAGQEQLGRRIHYPQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|111054507|gb|ABH04327.1| beta-lactamase SHV-92 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMISTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLAIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|218091983|emb|CAP58288.1| beta-lactamase [Klebsiella pneumoniae]
 gi|223635893|emb|CAQ03504.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVGYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|46309214|emb|CAG25830.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 55/213 (25%), Gaps = 2/213 (0%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLTDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                KTG        IVA      +    V+L
Sbjct: 213 WFIADKTGAGERGARGIVALLGPDGKPERIVVL 245


>gi|197724697|emb|CAP12350.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLVDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSPRSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|294630624|ref|ZP_06709184.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
 gi|292833957|gb|EFF92306.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. e14]
          Length = 467

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           P L  A         ++D  TG  + E      + PAS+TK+ TA    S 
Sbjct: 90  PLLGDAALGARHSAAVVDAATGRTLYEQDGGQAFTPASVTKIATAVAALSA 140


>gi|124263630|gb|ABM97537.1| beta-lactamase [Klebsiella pneumoniae]
 gi|160948443|emb|CAJ47131.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLAALPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    ++ +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVEDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|46452174|gb|AAS98184.1| inhibitor-resistant beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMISTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|226363727|ref|YP_002781509.1| D-alanyl-D-alanine carboxypeptidase [Rhodococcus opacus B4]
 gi|226242216|dbj|BAH52564.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus opacus
           B4]
          Length = 461

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           ++      +          T+ D  TG V+    P  P  PAS TK++TA
Sbjct: 76  IAAAVGPAAANPDLGKFSGTVADAVTGQVLWSVNPQTPMTPASTTKVLTA 125


>gi|157783587|gb|ABV72593.1| beta-lactamase SHV-101 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    + G+       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDGRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|125658592|gb|ABN49115.1| beta-lactamase SHV-71 [Shigella sp. SHV-71]
 gi|160948433|emb|CAJ47126.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKYLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPVGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|94502816|gb|ABF29636.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 282

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 60/231 (25%), Gaps = 6/231 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 42  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 101

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 102 SEKHLTDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLERWETA 161

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 162 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 221

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSAS 258
                KTG        IVA      +   ++ + L         RN+  A 
Sbjct: 222 WFIADKTGAGERGARGIVALLGPDGKPERIVVIYLRDTPASMAERNQHIAR 272


>gi|46309176|emb|CAG25811.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309218|emb|CAG25832.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309220|emb|CAG25833.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLTDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|31075043|gb|AAP41944.1| beta-lactamase SHV-51 [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++        F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGLAGLTAFLRQIGDNVTRLDRWETELNEALPADARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|28192520|gb|AAN05031.1| LEN-4 beta-lactamase [Klebsiella pneumoniae]
          Length = 274

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 38  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 97

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 98  SEKHLTDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 157

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 158 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 217

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 218 WFIADKTG------------AGERGARGIVALLGPDGKPER 246


>gi|15721853|gb|AAK69829.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V +       KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLSAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|179251493|gb|ACB78193.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 267

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 32  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGVEQLDRRIHYRQQDLVDYSPV 91

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 92  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 151

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 152 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 211

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 212 WFIADKTG------------AGERGARGIVALLGPDGKPER 240


>gi|111021373|ref|YP_704345.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1]
 gi|110820903|gb|ABG96187.1| serine-type D-Ala-D-Ala carboxypeptidase [Rhodococcus jostii RHA1]
          Length = 461

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           ++      +          T+ D  TG V+    P  P  PAS TK++TA
Sbjct: 76  IAAAVGPAAANPDLGKFSGTVADAVTGQVLWSVNPQTPMTPASTTKVLTA 125


>gi|46309212|emb|CAG25829.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309228|emb|CAG25837.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGVEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|325518504|gb|EGC98195.1| D-alanyl-D-alanine endopeptidase [Burkholderia sp. TJI49]
          Length = 157

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           +L++         +       +LD ++G  +           AS++KLMT
Sbjct: 108 LLASCGYNPRAVRSLHSRAAYVLDVDSGTPLLARNSRTVRPIASISKLMT 157


>gi|46309182|emb|CAG25814.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 55/213 (25%), Gaps = 2/213 (0%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                KTG        IVA      +    V+L
Sbjct: 213 WFIADKTGAGERGARGIVALLGPDGKPERIVVL 245


>gi|293628083|gb|ADE58494.1| extended-spectrum beta-lactamase SHV-128 [Enterobacter cloacae]
          Length = 286

 Score = 51.1 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELRA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|186682820|ref|YP_001866016.1| beta-lactamase [Nostoc punctiforme PCC 73102]
 gi|186465272|gb|ACC81073.1| beta-lactamase [Nostoc punctiforme PCC 73102]
          Length = 340

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 7/146 (4%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
           P    +D  TG        D  ++ AS  K      +F  +   K  L   + + +    
Sbjct: 96  PGIFFMDLKTGD-YFSFNGDKAFSAASTIKYPILIALFQEIDAGKIKLGEALVMRRKHVT 154

Query: 89  -YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    + G+ ++L      ++  S N     I + L       V  +N   +  GL
Sbjct: 155 GGSGDLQYQRVGTKLSLLQTATKMMTISDNTATNMIIDRL-----GGVSKLNQKFRRWGL 209

Query: 148 SATHFMNAHGVVQHGHYTTARDMAIL 173
            +T   N  G  +  + T+A+D+  L
Sbjct: 210 QSTVIHNMLGDFKGTNKTSAKDLVRL 235


>gi|302530794|ref|ZP_07283136.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. AA4]
 gi|302439689|gb|EFL11505.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. AA4]
          Length = 545

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT---AYVVFSFL 69
           ++      + A        +++D  +G V+ ++  + P  PAS TK++T   A +     
Sbjct: 154 VAAKLSGPAGAAALSQLSGSVIDPASGTVLWDHASNTPLTPASTTKILTVSAALLAMEPT 213

Query: 70  K 70
           K
Sbjct: 214 K 214


>gi|291621299|dbj|BAI94487.1| beta-lactamase SHV-133 [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +          +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDGVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|160948441|emb|CAJ47130.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPHNKAER 253


>gi|197724701|emb|CAP12352.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 45  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 105 SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 165 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 225 WFIADKTG------------AGERGARGIVALLGPDGKPER 253


>gi|46309186|emb|CAG25816.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309222|emb|CAG25834.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|28192518|gb|AAN05030.1| LEN-3 beta-lactamase [Klebsiella pneumoniae]
          Length = 274

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 38  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 97

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 98  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 157

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 158 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPG 217

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 218 WFIADKTG------------AGERGARGIVALLGPDGKPER 246


>gi|312131162|ref|YP_003998502.1| peptidase s13 d-ala-d-ala carboxypeptidase c [Leadbetterella
          byssophila DSM 17132]
 gi|311907708|gb|ADQ18149.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Leadbetterella
          byssophila DSM 17132]
          Length = 404

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 24 ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
            +      + +  +G V+       P+ PAS TK+++ Y     L 
Sbjct: 27 PKHAFSGVLIKEGKSGKVLFAKNAHKPFVPASNTKILSMYAALEMLP 73


>gi|77021908|gb|ABA60809.1| SHV-type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITVSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|332559029|ref|ZP_08413351.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacter sphaeroides WS8N]
 gi|332276741|gb|EGJ22056.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacter sphaeroides WS8N]
          Length = 485

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%)

Query: 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++ A       Y + D  +G V+          PAS  K +TA     
Sbjct: 46 LVARAALGGAVAYVVADARSGTVLEAANAALRLPPASTAKTVTALYGLE 94


>gi|221640022|ref|YP_002526284.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodobacter sphaeroides KD131]
 gi|221160803|gb|ACM01783.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           precursor [Rhodobacter sphaeroides KD131]
          Length = 507

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            ++ A       Y + D  +G V+          PAS  K +TA     
Sbjct: 68  LVARAALGGAVAYVVADARSGTVLEAANAALRLPPASTAKTVTALYGLE 116


>gi|126462996|ref|YP_001044110.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacter sphaeroides ATCC 17029]
 gi|126104660|gb|ABN77338.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacter sphaeroides ATCC 17029]
          Length = 485

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%)

Query: 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++ A       Y + D  +G V+          PAS  K +TA     
Sbjct: 46 LVARAALGGAVAYVVADARSGTVLEAANAALRLPPASTAKTVTALYGLE 94


>gi|320010031|gb|ADW04881.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces flavogriseus ATCC 33331]
          Length = 493

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A ++ + + P L       +    ++D  TG  +       P  PAS  K+ T   V S 
Sbjct: 113 ASSLRTALDPLLDKPALGSVRTAVVIDAATGKQLFARGAATPMTPASTVKIATTVAVLSA 172


>gi|41584428|gb|AAS09879.1| SHV-5 extended spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         K G        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKNG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|41584430|gb|AAS09880.1| SHV-5 extended spectrum beta-lactamase [Escherichia coli]
          Length = 285

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         K G        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKNG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|41584438|gb|AAS09884.1| SHV-5 extended spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         K G        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKNG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|322806097|emb|CBZ03664.1| D-alanyl-D-alanine carboxypeptidase [Clostridium botulinum H04402
           065]
          Length = 137

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 10/107 (9%)

Query: 239 LIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISE 294
           ++AVI+GA     RNK ++ L++ GF     +  +             +     +    E
Sbjct: 1   MLAVIMGAPTYKIRNKDASKLMNYGFSKFECKTLVKKGDVISKVPLNSKGDKYFMAKSCE 60

Query: 295 EVCTTQKEIINYNTQMK------EAKDKESHFIDFEKITLLKNKITK 335
           E+    ++        K      + + K +  +   +     N I K
Sbjct: 61  ELDAIIEKGKKPKITNKCIIDENKKEYKINEEVGICEFYSDGNLIGK 107


>gi|146260182|gb|ABQ14421.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMVS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLRGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|32442315|gb|AAP82228.1| beta-lactamase SHV-44 [Klebsiella pneumoniae]
 gi|32815775|gb|AAP88261.1| SHV beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQLQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|18958446|gb|AAL82593.1|AF467948_1 beta-lactamase SHV-37 [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLAALPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITVSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|8052554|gb|AAF37209.2|AF208796_1 beta-lactamase [Klebsiella pneumoniae]
 gi|262477937|gb|ACY68238.1| beta-lactamase blaSHV-25 [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLAALPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITVSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|41584432|gb|AAS09881.1| SHV-5 extended spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         K G        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKNG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|219958082|gb|ACL68095.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 70/276 (25%), Gaps = 17/276 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + +   + +      +     +              Y  +D  +G  +A      
Sbjct: 1   MRYIRLCLFSLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLASGRTLAAWRASE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPLMSTFKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     + +          F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   + +         Q+    +  +       AV         KTG        
Sbjct: 181 SMATTLRKLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRG 240

Query: 228 IVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
           IVA      +   ++ + L         RN+  A +
Sbjct: 241 IVALLGPNGKAERIVVIYLRDTPATIAERNQQIARI 276


>gi|304310146|ref|YP_003809744.1| beta-lactamase class D (Penicillin-binding protein) (OXA-9) [gamma
           proteobacterium HdN1]
 gi|301795879|emb|CBL44080.1| beta-lactamase class D (Penicillin-binding protein) (OXA-9) [gamma
           proteobacterium HdN1]
          Length = 276

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 66/241 (27%), Gaps = 12/241 (4%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKL--PYYTLLDTNTGHVIAENYPD--HPWNPASLTKLMT 61
           +   + ++S +F   ++A           ++D  TG  +     D     +P S  K+  
Sbjct: 8   LAFLLVVISVLFSANAVASEQAALLKCTLVVDAATGSTLY-RNGDCTRRASPCSSFKIPL 66

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           A + F           T     +                    D+ +      +      
Sbjct: 67  AIMGFESGILHSPESPTWELKPEYNPSKRDQMYPKVNPVLWERDSVVWFSQHLTTRLGEA 126

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF 181
           A ++ + K +        ++ KN GL+ +  M++  +                  I  + 
Sbjct: 127 AFSDYIKKFQYGNQDGSGDSGKNNGLTRSWLMSSLAISPEEQVQFLHRFIARQLPISRNT 186

Query: 182 PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN--IVASAIQGDQSL 239
            + +     +     G           +  G    + G    S      V  A +  + +
Sbjct: 187 YEMVRATIPQYQAKDGWVVH-----GKSGSGWLLDRDGKEDESRPQGWFVGWAEKAGRQV 241

Query: 240 I 240
           I
Sbjct: 242 I 242


>gi|300934616|ref|ZP_07149872.1| putative penicillin-binding protein 4 [Corynebacterium resistens
           DSM 45100]
          Length = 470

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +     +           + D  TG ++    P  P  PAS TK++TA   
Sbjct: 92  SAVAKAAKDPALGKLSAAVTDVRTGKILWSADPKRPLVPASSTKVLTAAAA 142


>gi|116071062|ref|ZP_01468331.1| possible beta-lactamase family protein [Synechococcus sp. BL107]
 gi|116066467|gb|EAU72224.1| possible beta-lactamase family protein [Synechococcus sp. BL107]
          Length = 358

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/259 (10%), Positives = 64/259 (24%), Gaps = 27/259 (10%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     ++  Y L+  + G   A+     P   AS  K      V   + +       
Sbjct: 89  QAATQPDLQVSAYMLI-LDDGRF-AQMNAHRPMPAASSIKTPILLAVLERIDQGTLQWNE 146

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+T++K            +   +      +   +++ +++ A  +  +    +       
Sbjct: 147 PLTLTKELVGGGAGWMASRPLGSRFPTYEVATEMIRVSDNSATNLMIARAGGQDAINARF 206

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-GLEIKG 197
                         +  + +       T     +       D  + +         E+  
Sbjct: 207 QALDL------PSTVVNNWLPDLDGTNTTSARDLSRAIALVDSGESLGPRSRDLFREVMA 260

Query: 198 KKYPNTNWAVGTFLGADG-----------------MKTGFTCASGFNIVASAIQGDQSLI 240
               NT    G   G  G                  KTG    +  +     +   +  +
Sbjct: 261 TSVTNTLLPTGLMRGLGGAQGAPDSALARKGYRVFNKTGDIGTAYADAGLIELPDGRRAV 320

Query: 241 AVIL-GALDRNTRNKVSAS 258
           A  L      + R+     
Sbjct: 321 AGFLVKGPFNDPRSTEMIR 339


>gi|32470126|ref|NP_863495.1| beta-lactamase CTX-M-16 [Klebsiella pneumoniae]
 gi|21039160|gb|AAM33515.1|AF454633_1 extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|16506520|gb|AAK71471.1| beta-lactamase CTX-M-17 [Klebsiella pneumoniae]
          Length = 291

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAKGL 291


>gi|146260101|gb|ABQ14396.1| beta-lactamase [uncultured soil bacterium]
          Length = 271

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             +++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFRVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHPTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|146260232|gb|ABQ14441.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  AFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|237786217|ref|YP_002906922.1| putative penicillin-binding protein 4 [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237759129|gb|ACR18379.1| putative penicillin-binding protein 4 [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 557

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + D +TG  + E        PAS TK+MT     
Sbjct: 140 VTDASTGKTLWEKNSSTAMVPASSTKMMTTAAAL 173


>gi|160948439|emb|CAJ47129.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLTVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|48525538|gb|AAT45018.1| beta-lactamase KLUY-4 [Kluyvera sp. N03-0462]
          Length = 291

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPDHP 50
           F     + +L +  P  +     +                 L+D  +   V+     D  
Sbjct: 11  FAAAACIPLLLSSAPLYAQTSAVQQKLATLEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIRPTDLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|161367444|gb|ABX71158.1| extended-spectrum beta-lactamase SHV-104 [Klebsiella pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSASSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|74422857|gb|ABA06589.1| mutant extended-spectrum beta-lactamase SHV-67 [Klebsiella
           pneumoniae]
          Length = 286

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWCADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|46244156|gb|AAP93842.1| beta-lactamase [Citrobacter freundii]
          Length = 234

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 2/216 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 19  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 78

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 79  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 138

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 139 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 198

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                    K+G        I+A+     +    V+
Sbjct: 199 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVV 234


>gi|46244162|gb|AAP93845.1| beta-lactamase [Escherichia coli]
          Length = 242

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 2/216 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 27  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 86

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 87  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 146

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 147 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 206

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                    K+G        I+A+     +    V+
Sbjct: 207 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVV 242


>gi|46244152|gb|AAP93840.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 241

 Score = 50.7 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 2/216 (0%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 26  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 85

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 86  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 145

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +            L   +  +        Q+       K       + 
Sbjct: 146 WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 205

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                    K+G        I+A+     +    V+
Sbjct: 206 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVV 241


>gi|120554008|ref|YP_958359.1| Beta-lactamase [Marinobacter aquaeolei VT8]
 gi|120323857|gb|ABM18172.1| Beta-lactamase [Marinobacter aquaeolei VT8]
          Length = 301

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 80/267 (29%), Gaps = 15/267 (5%)

Query: 3   QFLVIIAMAMLSNIFPF----------LSIAETNKLP-YYTLLDTNTGHVIAENYPDHPW 51
           + +  I + + +++               +A+  +    +   D  +G    E + D  +
Sbjct: 5   KLIAAILLTLSTSVASADQDNSLIKTVKKVADDLEARVGFAAYDLESGQR-WEYHADQRF 63

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKL 110
             +S  K +    +   +   +A L   + +S+ +   Y P   T+  G  MTL +  + 
Sbjct: 64  AMSSTFKTLACAALLHRVDTGQANLARKVNVSESDLVTYSPITETYADGEAMTLSDLCEA 123

Query: 111 LIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  +       +    F +H+ +    L    T    A         T   
Sbjct: 124 TLTTSDNTAANLVLRELGGPEAVTSFARHLGDDVTRLDRWETELNEALPGDNRDTTTPNA 183

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            +  L   +  D        Q++      +       A          +TG       +I
Sbjct: 184 MVRNLQTLLLGDALSEPSREQLRDWLEGNQVADGLFRAAVPEGWVVADRTGAGGFGSRSI 243

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKV 255
            A     ++  I V L     +     
Sbjct: 244 TAVIWPPERQPIVVALYLTQTDASFAE 270


>gi|117620476|ref|YP_857133.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|60679103|gb|AAX33841.1| penicillin-binding protein [Aeromonas veronii bv. sobria]
 gi|117561883|gb|ABK38831.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 478

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
          M++ L+                       Y  ++  N G V    + D    PAS  K++
Sbjct: 1  MQRLLIGFCALFSLAAQAAPLTPPQ-GGQYAIIVQGNNG-VEFARHADQMIAPASTMKVL 58

Query: 61 TAYVV 65
          TA   
Sbjct: 59 TALAA 63


>gi|227494491|ref|ZP_03924807.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Actinomyces coleocanis DSM 15436]
 gi|226832225|gb|EEH64608.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Actinomyces coleocanis DSM 15436]
          Length = 451

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
              ++D  TG+V+       P  PAS TK+  A+V    L  
Sbjct: 92  GAYVIDAVTGNVVFAQNEMKPVVPASTTKVFAAFVALDALDP 133


>gi|6165409|emb|CAB59824.1| beta-lactamase class A [Kluyvera ascorbata]
 gi|18129349|emb|CAD20585.1| beta-lactamase class A [Kluyvera ascorbata]
 gi|18129351|emb|CAD20586.1| beta-lactamase class A [Kluyvera ascorbata]
 gi|18129365|emb|CAD20593.1| beta-lactamase class A [Kluyvera ascorbata]
          Length = 291

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAIIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|323483091|ref|ZP_08088484.1| hypothetical protein HMPREF9474_00233 [Clostridium symbiosum
           WAL-14163]
 gi|323403631|gb|EGA95936.1| hypothetical protein HMPREF9474_00233 [Clostridium symbiosum
           WAL-14163]
          Length = 262

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 15/243 (6%)

Query: 26  NKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
            +     ++ D  TG    E   D  +  ASL K+     +F   KE +  L   I + K
Sbjct: 17  IEGKKAIVIEDLKTGEA-VEINRDEVFPAASLIKVPVLSALFRMAKESQIALDERIELEK 75

Query: 85  NASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           ++             G   ++ +   L+I  S N  A  + + +       +  +N+  +
Sbjct: 76  DSRIGGFGILKDLGDGLNPSVRDLAVLMITLSDNIAANLLIDRI------GMSQINSELQ 129

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +G+  T         Q          +    +          +       +  ++  N 
Sbjct: 130 AMGMKHTVLQRKMMDSQAKERGLDNYTSAGDMQKLMKAILESSFRGDILDILFRQQCNNK 189

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-----NKVSAS 258
             A+         KTG       +        D+ +IA++L     + R     N+    
Sbjct: 190 LPALMEGDVRFAHKTGDLPGVEHD-AGIICTDDREIIAIVLTDELADNREGIWLNQEIGK 248

Query: 259 LLS 261
           L++
Sbjct: 249 LIN 251


>gi|288921150|ref|ZP_06415438.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. EUN1f]
 gi|288347459|gb|EFC81748.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. EUN1f]
          Length = 492

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           A ++              P   ++D  TG V+       P  PAS  K+
Sbjct: 62  AAVTARLTGPLADPVLGNPAALVVDALTGQVLFAQRSTEPTAPASTIKI 110


>gi|315632439|gb|ADU53765.1| extended-spectrum beta-lactamase TEM-116 [Haemophilus parasuis]
 gi|315632441|gb|ADU53766.1| extended-spectrum beta-lactamase TEM-116 [Haemophilus parasuis]
          Length = 167

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 2   GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 61

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 62  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 121

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +       
Sbjct: 122 WEPELNEAIPNDERDTTMPV 141


>gi|46244160|gb|AAP93844.1| beta-lactamase [Hafnia alvei]
          Length = 232

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 21  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 80

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 81  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 140

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +       
Sbjct: 141 WEPELNEAIPNDERDTTMPV 160


>gi|46244158|gb|AAP93843.1| beta-lactamase [Klebsiella oxytoca]
          Length = 229

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 21  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 80

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 81  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 140

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +       
Sbjct: 141 WEPELNEAIPNDERDTTMPV 160


>gi|46244154|gb|AAP93841.1| beta-lactamase [Serratia marcescens]
          Length = 212

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 17  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVE 76

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 77  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 136

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +       
Sbjct: 137 WEPELNEAIPNDERDTTMPV 156


>gi|195927602|pdb|3DTM|A Chain A, Increased Folding Stability Of Tem-1 Beta-Lactamase By In-
           Vitro Selection
          Length = 263

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 64/228 (28%), Gaps = 3/228 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++     +  +   S  K++    + S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRSEERFPMMSTFKVLLCGAILSRIDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A          K    F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKGLTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +    T       L   +  +        Q+       K       +V
Sbjct: 140 WEPELNEAIPNDERDTTTPVAMATTLRKLLTGELLTPASRQQLMDWMEADKVAGPLLRSV 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
                    K+G        IVA+     +   I VI     + T ++
Sbjct: 200 LPAGWFIADKSGAGERGSRGIVAALGPDGKPSRIVVIYTTGSQATMDE 247


>gi|238019629|ref|ZP_04600055.1| hypothetical protein VEIDISOL_01503 [Veillonella dispar ATCC 17748]
 gi|237863670|gb|EEP64960.1| hypothetical protein VEIDISOL_01503 [Veillonella dispar ATCC 17748]
          Length = 272

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 73/234 (31%), Gaps = 15/234 (6%)

Query: 30  YYTLLDTNTGH---VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
            Y +L  +      +IA    D   + ASL K++    VF   + ++  L   + +S+  
Sbjct: 28  SYVVLQFDDEEEPIIIASKGEDTVHSSASLIKVLIMEYVFHLARTEQLDLNDTVPLSRTP 87

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                                L  L++  +++IA  +  ++       ++++N  ++ LG
Sbjct: 88  RVEGGGALQELVAKHSFTYLELCRLMMVLSDNIATNLLITVL-----GMENINARAEQLG 142

Query: 147 LSATHFMNAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
           +            +       +  TA  +A L      +      Y +     +  +++ 
Sbjct: 143 VDEIELNRMMMDFEALAEGRDNRMTAMALARLYKH-IFECRDRDFYGREMWNILGRQQFR 201

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           +              KTG       +              ++L +   N R K 
Sbjct: 202 DILPFYWGEDVRFHHKTGSLDRVEHDGGILETFRGH-FCFILLMSDIDNDRGKE 254


>gi|67462183|gb|AAV28215.2| beta-lactamase CTX-M-40 [Escherichia coli]
          Length = 290

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 78/283 (27%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
            +    +++L    P  + A   +     L            +D  +    +     D  
Sbjct: 10  LMTTACISLLLGSAPLYAQANDVQQKLAALEKSSGGRLGVALIDTADNAQTLY--RADER 67

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L+  + I  +        +      TMTL      
Sbjct: 68  FAMCSTSKVMAAAAVLKQSETQKNVLSQKVEIKSSDLINYNPIAEKHVNGTMTLAELSAA 127

Query: 111 LIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +   L   +K   F + + + +  L  +      A         T   
Sbjct: 128 ALQYSDNTAMNKLIAHLGGPDKVTAFARAIGDDTFRLDRTEPTLNTAIPGDPRDTTTPLA 187

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 188 MAQTLRHLTLGSALGETQRAQLVTWLKGNTTGAASIQAGLPTSWVVGDKTGSGDYGTTND 247

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  LI V         A  R      +A +++ G+
Sbjct: 248 IAVIWPEGRAPLILVTYFTQPEQKAESRRDVLAAAAKIVTDGY 290


>gi|289807457|ref|ZP_06538086.1| D-alanyl-D-alanine carboxypeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 92

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/88 (35%), Positives = 46/88 (52%)

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           ND  VA+A+ +   + +FV  MN+  K L L  THF   HG+   G +++A D+A+LS  
Sbjct: 2   NDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQHSSAYDLAVLSRA 61

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           I    P++ H +  K L   G    N N
Sbjct: 62  IIHGEPEFYHMYSEKSLTWNGITQQNRN 89


>gi|16304824|emb|CAC95175.1| CTX-M-20 beta-lactamase [Proteus mirabilis]
          Length = 291

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDFLAAAAKIVTHGF 291


>gi|162329895|pdb|2J9O|A Chain A, Structure Of Pbp-A, L158e Mutant
 gi|162329896|pdb|2J9O|B Chain B, Structure Of Pbp-A, L158e Mutant
 gi|162329897|pdb|2J9O|C Chain C, Structure Of Pbp-A, L158e Mutant
 gi|162329898|pdb|2J9O|D Chain D, Structure Of Pbp-A, L158e Mutant
 gi|167013198|pdb|2JBF|A Chain A, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
           Penicillin-G.
 gi|167013199|pdb|2JBF|B Chain B, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
           Penicillin-G.
 gi|167013200|pdb|2JBF|C Chain C, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
           Penicillin-G.
 gi|167013201|pdb|2JBF|D Chain D, Structure Of Pbp-A, L158e Mutant. Acyl-Enzyme Complex With
           Penicillin-G
          Length = 298

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 80/258 (31%), Gaps = 15/258 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S         Y   + ++G  +     D  +  AS  K       F  + E +  L  
Sbjct: 27  LVSRQPNLTAGLYF-FNLDSGASL-NVGGDQVFPAASTIKFPILVAFFKAVDEGRVTLQE 84

Query: 79  PITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            +T+  +  +    +    K  S        +L+I  S N     I + L          
Sbjct: 85  RLTMRPDLIAPEAGTLQYQKPNSQYAALEVAELMITISDNTATNMIIDRL-----GGAAE 139

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           +N   +  GL  T   N    ++  + T+ RD+A L               + + L+I  
Sbjct: 140 LNQQFQEWGLENTVINNPEPDMKGTNTTSPRDLATLML-KIGQGEILSPRSRDRLLDIMR 198

Query: 198 KKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNT 251
           +   NT    G   GA    KTG       +     +   Q  +A ++          + 
Sbjct: 199 RTVTNTLLPAGLGKGATIAHKTGDIGIVVGDAGMVDMPNGQRYVAAMMVKRPYNDPRGSE 258

Query: 252 RNKVSASLLSMGFYNKTD 269
             +  + ++   F   + 
Sbjct: 259 LIRQVSRMVYQAFEKLSP 276


>gi|81300412|ref|YP_400620.1| beta-lactamase [Synechococcus elongatus PCC 7942]
 gi|81169293|gb|ABB57633.1| beta-lactamase [Synechococcus elongatus PCC 7942]
          Length = 375

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 73/233 (31%), Gaps = 6/233 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + + +   +      K     L D +TG+   +         AS  K+     +   +++
Sbjct: 110 LQTQLAALIQQQPALKAE-LFLTDLDTGN-YVDINGTTSIPAASTIKIPVLAALMEAVQQ 167

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K  L   +T++++          ++   +        + +++ +++ A  +  +     
Sbjct: 168 GKVRLDEQLTMTQDLVASEAGAMQYQPVGSKFTVLETAIEMIRISDNTATNLLIARLGGI 227

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           +      N      GL  T   N    ++  + TT ++M  L  +++             
Sbjct: 228 EAV----NQRFAAWGLQTTRIRNLLPDLEGTNSTTPKEMVELLAKVENGSLLDPRSRDRF 283

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              ++  +                 KTG       ++    +   +  IA +L
Sbjct: 284 FAVLRTTETNTLLSRGLGEEATIAHKTGDIAMVVGDVGLIDMPSGKRYIAAML 336


>gi|56750069|ref|YP_170770.1| beta-lactamase [Synechococcus elongatus PCC 6301]
 gi|56685028|dbj|BAD78250.1| beta-lactamase [Synechococcus elongatus PCC 6301]
          Length = 317

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 73/233 (31%), Gaps = 6/233 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + + +   +      K     L D +TG+   +         AS  K+     +   +++
Sbjct: 52  LQTQLAALIQQQPALKAE-LFLTDLDTGN-YVDINGTTSIPAASTIKIPVLAALMEAVQQ 109

Query: 72  KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE 131
            K  L   +T++++          ++   +        + +++ +++ A  +  +     
Sbjct: 110 GKVRLDEQLTMTQDLVASEAGAMQYQPVGSKFTVLETAIEMIRISDNTATNLLIARLGGI 169

Query: 132 KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
           +      N      GL  T   N    ++  + TT ++M  L  +++             
Sbjct: 170 EAV----NQRFAAWGLQTTRIRNLLPDLEGTNSTTPKEMVELLAKVENGSLLDPRSRDRF 225

Query: 192 GLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              ++  +                 KTG       ++    +   +  IA +L
Sbjct: 226 FAVLRTTETNTLLSRGLGEEATIAHKTGDIAMVVGDVGLIDMPSGKRYIAAML 278


>gi|13786975|pdb|1HTZ|A Chain A, Crystal Structure Of Tem52 Beta-Lactamase
 gi|13786976|pdb|1HTZ|B Chain B, Crystal Structure Of Tem52 Beta-Lactamase
 gi|13786977|pdb|1HTZ|C Chain C, Crystal Structure Of Tem52 Beta-Lactamase
 gi|13786978|pdb|1HTZ|D Chain D, Crystal Structure Of Tem52 Beta-Lactamase
 gi|13786979|pdb|1HTZ|E Chain E, Crystal Structure Of Tem52 Beta-Lactamase
 gi|13786980|pdb|1HTZ|F Chain F, Crystal Structure Of Tem52 Beta-Lactamase
          Length = 263

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVK 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +    T A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G +      I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGASERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|256862200|gb|ACV32635.1| beta-lactamase Shv125 [Klebsiella pneumoniae]
          Length = 271

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLNIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|29169569|gb|AAO66446.1| extended-spectrum beta-lactamase [Escherichia coli]
          Length = 286

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETERNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|260178852|gb|ACX34099.1| extended spectrum beta-lactamase CTX-M-91 [Proteus mirabilis]
          Length = 291

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 80/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAVAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQSLRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGDYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|17980762|gb|AAL50725.1|AF452105_1 LEN-type beta-lactamase variant [Klebsiella pneumoniae]
          Length = 279

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTL-LDTNTGHVIAENYPDH 49
           MR  +  VI  +A L  +                        + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLVVYAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLVDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSPRSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|125658588|gb|ABN49113.1| beta-lactamase SHV-95 [Citrobacter freundii]
          Length = 286

 Score = 50.4 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARLQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|265260945|gb|ACY74743.1| extended spectrum beta-lactamase CTX-M-92 [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRTQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|112785126|gb|ABI20753.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMT       
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTQAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|18129357|emb|CAD20589.1| beta-lactamase class A [Kluyvera ascorbata]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +Q  L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAIIWPENQTPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|208503063|gb|ACI29347.1| extended spectrum CTX-M-85 beta-lactamase [Salmonella enterica
           subsp. enterica serovar Albany]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMT       
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTPAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|81238145|gb|ABB59946.1| extended-spectrum beta-lactamase CTX-M-82 [Escherichia coli]
 gi|291061255|gb|ADD73421.1| extended-spectrum beta-lactamase CTX-M-82 [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFPMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|238801080|gb|ACR56321.1| extended spectrum beta-lactamase CTX-M-89 [Proteus mirabilis]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 80/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAVAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGDYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|294140853|ref|YP_003556831.1| penicillin-binding protein 4 [Shewanella violacea DSS12]
 gi|293327322|dbj|BAJ02053.1| penicillin-binding protein 4 [Shewanella violacea DSS12]
          Length = 486

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 9/74 (12%)

Query: 1  MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
          M+  +    +    ++           F SI   +        +  TG +I E  PD   
Sbjct: 1  MKPLVNACLLLSFLSLPALGDANFNHLFSSIKPPHSHTAIIATNLVTGDIIFEQNPDTLL 60

Query: 52 NPASLTKLMTAYVV 65
           PAS  KL+TA   
Sbjct: 61 LPASTMKLLTAVAA 74


>gi|71609065|emb|CAG25812.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 73/269 (27%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A    +  +   S 
Sbjct: 8   LISLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLVSGRTLAAWRANERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIAEKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPASMAERNQQIARI 276


>gi|226304107|ref|YP_002764065.1| D-alanyl-D-alanine carboxypeptidase [Rhodococcus erythropolis PR4]
 gi|226183222|dbj|BAH31326.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus
           erythropolis PR4]
          Length = 441

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++                  + D  TG+++    P  P  PAS TK++TA    
Sbjct: 56  IAAAIGPAVANPDLGKFTGVVADALTGNILWSADPSTPMTPASTTKVLTASAAL 109


>gi|94502804|gb|ABF29629.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 272

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 6   IISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 65

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 66  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 125

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 126 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 186 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------ASK 233

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 234 RGARGIVALLGPNNKAER 251


>gi|94502834|gb|ABF29646.1| beta-lactamase [Klebsiella pneumoniae]
 gi|94502901|gb|ABF29683.1| beta-lactamase [Enterobacter cloacae]
          Length = 265

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 2   IISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 62  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 121

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 122 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 182 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------ASK 229

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 230 RGARGIVALLGPNNKAER 247


>gi|90403949|gb|ABD93868.1| SHV-12 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 277

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 6   IISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 65

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 66  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 125

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 126 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 186 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------ASK 233

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 234 RGARGIVALLGPNNKAER 251


>gi|303297117|gb|ADM08178.1| beta-lactamase CTX-M-97 [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|32187779|emb|CAD99181.1| beta-lactamase CTX-M-31 [Providencia sp. 4440]
 gi|32187781|emb|CAD99182.1| beta-lactamase CTX-M-31 [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + S  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDESFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|145298675|ref|YP_001141516.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-
          alanine-endopeptidase [Aeromonas salmonicida subsp.
          salmonicida A449]
 gi|142851447|gb|ABO89768.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-
          alanine-endopeptidase [Aeromonas salmonicida subsp.
          salmonicida A449]
          Length = 481

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
          M++ L+       + +   +  A         Y  ++    G +      D    PAS  
Sbjct: 1  MQRLLIGFCALFSTLVPTLVQAATLTPPKGGQYAIIV-QGNGGIEFARNADDMIAPASTM 59

Query: 58 KLMTAYVV 65
          K++TA   
Sbjct: 60 KVLTALAA 67


>gi|18958444|gb|AAL82592.1|AF467947_1 beta-lactamase SHV-36 [Klebsiella pneumoniae]
 gi|50513039|gb|AAT77772.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYVRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|6979154|gb|AAF34336.1| beta-lactamase SHV-5 variant [Klebsiella pneumoniae]
          Length = 260

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDKVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 215 WFIADKTG------------ASKRGARGIVALLGPNNKAER 243


>gi|206577539|ref|YP_002238610.1| beta-lactamase [Klebsiella pneumoniae 342]
 gi|206580492|ref|YP_002238630.1| beta-lactamase [Klebsiella pneumoniae 342]
 gi|206566597|gb|ACI08373.1| beta-lactamase [Klebsiella pneumoniae 342]
 gi|206569550|gb|ACI11326.1| beta-lactamase [Klebsiella pneumoniae 342]
          Length = 286

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 45  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 105 SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 165 LNEALPGDARDTTTPASMAATLRKLLTAQHLSPRSQQQLLQWMVDDRVAGPLIRAVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 225 WFIADKTG------------AGERGARGIVALLGPDGKPER 253


>gi|21465758|pdb|1JWP|A Chain A, Structure Of M182t Mutant Of Tem-1 Beta-Lactamase
 gi|22219359|pdb|1M40|A Chain A, Ultra High Resolution Crystal Structure Of Tem-1
 gi|34810264|pdb|1NXY|A Chain A, Crystal Structure Of The Complex Between M182t Mutant Of
           Tem-1 And A Boronic Acid Inhibitor (Sm2)
 gi|34810265|pdb|1NY0|A Chain A, Crystal Structure Of The Complex Between M182t Mutant Of
           Tem-1 And A Boronic Acid Inhibitor (Nbf)
 gi|34810266|pdb|1NYM|A Chain A, Crystal Structure Of The Complex Between M182t Mutant Of
           Tem-1 And A Boronic Acid Inhibitor (Cxb)
 gi|34810267|pdb|1NYY|A Chain A, Crystal Structure Of The Complex Between M182t Mutant Of
           Tem-1 And A Boronic Acid Inhibitor (105)
 gi|47168591|pdb|1PZO|A Chain A, Tem-1 Beta-Lactamase In Complex With A Novel, Core-
           Disrupting, Allosteric Inhibitor
          Length = 263

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +    T A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|289549537|ref|YP_003470441.1| penicillin binding protein 4 [Staphylococcus lugdunensis HKU09-01]
 gi|289179069|gb|ADC86314.1| penicillin binding protein 4 [Staphylococcus lugdunensis HKU09-01]
          Length = 269

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 33/244 (13%)

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--------------HGHYTTAR 168
           +AE +      F   MN  ++ L +  THF N  G                 H   TTA+
Sbjct: 1   MAEHIDGNSSDFTHRMNRKAQALHMRHTHFNNPSGADNRLIKPFAPSKYKQQHFSKTTAK 60

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----WAVGTFLGADGMKTGFTCAS 224
           DMA+L+ ++    P+ +   ++   +  G    NTN           GADG+KTG T   
Sbjct: 61  DMAVLTQQLVKQHPKVLKITRLTSDKQHGHMLKNTNLSLPAQADGLAGADGLKTG-TSNH 119

Query: 225 GFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
           G+N+  +A Q +  + +V+           ++ R ++S  ++   F N   RK ++    
Sbjct: 120 GYNLALTAKQNNLRIHSVLFQVQPFADERAKHVRQQLSNIMVRRAFKNYDYRKVLSKGQH 179

Query: 279 D------FYQQNLSNEVPN--ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLK 330
                  + +++L + VP      +      + ++   Q           ++  K++ +K
Sbjct: 180 RIQGKMYYVKKDLYDVVPKDHKGYQFKINHGKYVHLTYQRSFLPGTHPPKVEVVKVSGMK 239

Query: 331 NKIT 334
             I 
Sbjct: 240 RPIV 243


>gi|160285591|pdb|2J7V|A Chain A, Structure Of Pbp-A
 gi|160285592|pdb|2J7V|B Chain B, Structure Of Pbp-A
 gi|160285593|pdb|2J7V|C Chain C, Structure Of Pbp-A
 gi|160285594|pdb|2J7V|D Chain D, Structure Of Pbp-A
 gi|161172129|pdb|2J8Y|A Chain A, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
 gi|161172130|pdb|2J8Y|B Chain B, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
 gi|161172131|pdb|2J8Y|C Chain C, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
 gi|161172132|pdb|2J8Y|D Chain D, Structure Of Pbp-A Acyl-Enzyme Complex With Penicillin-G
          Length = 298

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 80/258 (31%), Gaps = 15/258 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S         Y   + ++G  +     D  +  AS  K       F  + E +  L  
Sbjct: 27  LVSRQPNLTAGLYF-FNLDSGASL-NVGGDQVFPAASTIKFPILVAFFKAVDEGRVTLQE 84

Query: 79  PITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            +T+  +  +    +    K  S        +L+I  S N     I + L          
Sbjct: 85  RLTMRPDLIAPEAGTLQYQKPNSQYAALEVAELMITISDNTATNMIIDRL-----GGAAE 139

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           +N   +  GL  T   N    ++  + T+ RD+A L               + + L+I  
Sbjct: 140 LNQQFQEWGLENTVINNPLPDMKGTNTTSPRDLATLML-KIGQGEILSPRSRDRLLDIMR 198

Query: 198 KKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNT 251
           +   NT    G   GA    KTG       +     +   Q  +A ++          + 
Sbjct: 199 RTVTNTLLPAGLGKGATIAHKTGDIGIVVGDAGMVDMPNGQRYVAAMMVKRPYNDPRGSE 258

Query: 252 RNKVSASLLSMGFYNKTD 269
             +  + ++   F   + 
Sbjct: 259 LIRQVSRMVYQAFEKLSP 276


>gi|145558692|gb|ABP73259.1| beta-lactamase TEM-131 [Salmonella sp. 467]
          Length = 263

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 49/153 (32%), Gaps = 13/153 (8%)

Query: 11  AMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              +  FP  +  ET                Y  LD N+G ++    P+  +   S  K+
Sbjct: 2   FFAAFCFPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 61

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 62  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVKYSPVTEKHLTDGMTVRELCSAAITMSDNTA 121

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
           A  +  ++   ++   F+ +M +    L     
Sbjct: 122 ANLLLTTIGGPKELTAFLHNMGDHVTRLDSWEP 154


>gi|22299658|ref|NP_682905.1| putative beta-lactamase [Thermosynechococcus elongatus BP-1]
 gi|22295842|dbj|BAC09667.1| tll2115 [Thermosynechococcus elongatus BP-1]
          Length = 368

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 80/258 (31%), Gaps = 15/258 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            +S         Y   + ++G  +     D  +  AS  K       F  + E +  L  
Sbjct: 118 LVSRQPNLTAGLYF-FNLDSGASL-NVGGDQVFPAASTIKFPILVAFFKAVDEGRVTLQE 175

Query: 79  PITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            +T+  +  +    +    K  S        +L+I  S N     I + L          
Sbjct: 176 RLTMRPDLIAPEAGTLQYQKPNSQYAALEVAELMITISDNTATNMIIDRL-----GGAAE 230

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           +N   +  GL  T   N    ++  + T+ RD+A L               + + L+I  
Sbjct: 231 LNQQFQEWGLENTVINNPLPDMKGTNTTSPRDLATLML-KIGQGEILSPRSRDRLLDIMR 289

Query: 198 KKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNT 251
           +   NT    G   GA    KTG       +     +   Q  +A ++          + 
Sbjct: 290 RTVTNTLLPAGLGKGATIAHKTGDIGIVVGDAGMVDMPNGQRYVAAMMVKRPYNDPRGSE 349

Query: 252 RNKVSASLLSMGFYNKTD 269
             +  + ++   F   + 
Sbjct: 350 LIRQVSRMVYQAFEKLSP 367


>gi|115035|sp|P05192|BLAC_KLEPN RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|43813|emb|CAA28198.1| unnamed protein product [Klebsiella pneumoniae]
          Length = 279

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MR--QFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTL-LDTNTGHVIAENYPDH 49
           MR  +  VI  +A L  +                        + +D   G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLVVYAGPQPLEQIKQSESQLSGRVGMVEMDLANGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPVSEKHLVDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPPGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|254839213|pdb|2ZQ8|A Chain A, Apo Structure Of Class A Beta-Lactamase Toho-1 R274nR276N
           Double Mutant
          Length = 262

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 68/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 85  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 145 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 204

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +RN     +A +++ GF
Sbjct: 205 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAENRNDILAAAAKIVTHGF 262


>gi|315364376|pdb|2XR0|A Chain A, Room Temperature X-Ray Structure Of The Perdeuterated
           Toho-1 R274n R276n Double Mutant Beta-Lactamase
          Length = 260

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 68/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 25  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 82

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 83  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 142

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 143 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 202

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +RN     +A +++ GF
Sbjct: 203 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAENRNDILAAAAKIVTHGF 260


>gi|256862204|gb|ACV32637.1| beta-lactamase Shv127 [Klebsiella pneumoniae]
          Length = 271

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRFIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  +   R
Sbjct: 233 ----AGERGARGIVALLGPNNNAER 253


>gi|8469132|sp|P74841|BLC2_SALTY RecName: Full=Beta-lactamase CTX-M-2; AltName: Full=Cefotaximase 2;
           Flags: Precursor
 gi|1524366|emb|CAA63263.1| ES-beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16304822|emb|CAC95174.1| CTX-M-2 beta-lactamase [Proteus mirabilis]
 gi|18307538|emb|CAD20939.1| beta-lactamase CTX-M-2 [Salmonella enterica subsp. enterica serovar
           Infantis]
 gi|20086227|gb|AAM03345.1| beta-lactamase CTX-M-2 [Proteus mirabilis]
 gi|41023646|emb|CAF18338.1| beta-lactamase CTX-M-2 precursor [Morganella morganii subsp.
           morganii]
 gi|50726689|dbj|BAD34451.1| beta-lactamase CTX-M-2 [Acinetobacter baumannii]
 gi|53988350|gb|AAV28216.1| beta-lactamase CTX-M-2 [Escherichia coli]
 gi|68262577|emb|CAJ13506.1| beta-lactamase CTX-M-2 precursor [Klebsiella pneumoniae]
 gi|68262580|emb|CAJ13508.1| beta-lactamase CTX-M-2 precursor [Klebsiella pneumoniae]
 gi|71273554|emb|CAJ13620.1| beta-lactamase [Escherichia coli]
 gi|71273565|emb|CAJ13630.1| beta-lactamase [Escherichia coli]
 gi|74055071|gb|AAZ95872.1| beta lactamase CTX-M-2 [Escherichia coli]
 gi|84180563|gb|ABC54728.1| beta-lactamase CTX-M-2 precursor [Vibrio cholerae]
 gi|148615578|gb|ABQ96621.1| beta-lactamase CTX-M-2 [Salmonella enterica subsp. enterica serovar
           Virchow]
 gi|148615589|gb|ABQ96631.1| beta-lactamase CTX-M-2 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|157139474|gb|ABV24345.1| extended spectrum beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|171674367|gb|ACB47942.1| CTX-M-2 [Klebsiella pneumoniae]
 gi|184216057|gb|ACC77477.1| CTX-M-2 [Klebsiella pneumoniae]
 gi|184216066|gb|ACC77485.1| CTX-M-2 [Klebsiella pneumoniae]
 gi|184216074|gb|ACC77492.1| CTX-M-2 [Klebsiella pneumoniae]
 gi|184216082|gb|ACC77499.1| CTX-M-2 [Klebsiella pneumoniae]
 gi|184216090|gb|ACC77506.1| CTX-M-2 [Klebsiella pneumoniae]
 gi|192822653|gb|ACF06162.1| beta-lactamase CTX-M2 [Klebsiella pneumoniae]
 gi|225579648|gb|ACN93993.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579658|gb|ACN93998.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579660|gb|ACN93999.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579662|gb|ACN94000.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579664|gb|ACN94001.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579668|gb|ACN94003.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579674|gb|ACN94006.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579678|gb|ACN94008.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579684|gb|ACN94011.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579686|gb|ACN94012.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579688|gb|ACN94013.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579690|gb|ACN94014.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579696|gb|ACN94017.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579698|gb|ACN94018.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579702|gb|ACN94020.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579710|gb|ACN94024.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579712|gb|ACN94025.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579724|gb|ACN94031.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579730|gb|ACN94034.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|225579734|gb|ACN94036.1| beta-lactamase blaCTX-M-2 [Klebsiella pneumoniae]
 gi|270267860|gb|ACZ65510.1| beta-lactamse CTX-M-2 [Escherichia coli]
 gi|288872167|dbj|BAI70510.1| beta-lactamase [Proteus mirabilis]
 gi|288872170|dbj|BAI70512.1| beta-lactamase [Proteus mirabilis]
 gi|288872173|dbj|BAI70514.1| beta-lactamase [Proteus mirabilis]
 gi|288872176|dbj|BAI70516.1| beta-lactamase [Proteus mirabilis]
 gi|294862105|gb|ADF45647.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862107|gb|ADF45648.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862109|gb|ADF45649.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862111|gb|ADF45650.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862113|gb|ADF45651.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862115|gb|ADF45652.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862117|gb|ADF45653.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862119|gb|ADF45654.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862121|gb|ADF45655.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862123|gb|ADF45656.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|294862125|gb|ADF45657.1| beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
 gi|1588604|prf||2209219B cefotaximase CTX-M-2
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|56069565|gb|AAV70602.1| beta lactamase CTX-M-38 [Klebsiella pneumoniae]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+               A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAARIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|82655066|emb|CAJ19601.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 71/276 (25%), Gaps = 17/276 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + +   + +      +     +              Y  +D  +G  +A      
Sbjct: 1   MRYVRLCLFSLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLASGRTLAAWRASE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPLMSTFKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     + +          F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRG 240

Query: 228 IVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
           IVA      +   ++ + L         RN+  A +
Sbjct: 241 IVALLGPNGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|229489777|ref|ZP_04383634.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodococcus erythropolis SK121]
 gi|229323287|gb|EEN89051.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodococcus erythropolis SK121]
          Length = 469

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++                  + D  TG+++    P  P  PAS TK++TA    
Sbjct: 84  IAAAIGPAVANPDLGKFTGVVADALTGNILWSTDPSTPMTPASTTKVLTASAAL 137


>gi|21637408|gb|AAM70498.1|AF518567_4 beta-lactamase CTX-M-25 [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 80/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAMLMTTACVSLLLASVPLCAQANDVQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAVAAVLKQSETQKGLLSQRVEIKPSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        +  S N     +   L   +K   F + + + +  L  +      A    
Sbjct: 120 MTFGELSAAALQYSDNTAMNKLIAHLGGPDKVTAFARTIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQALRNLTLGNALGDTQRAQLVMWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGGYGTTNDIAVIWPEGRAPLVLVTYFTQSEPKAESRRDVLAAAARIVTDGY 291


>gi|22725673|gb|AAN04884.1| beta-lactamase SHV-42 [Klebsiella pneumoniae]
 gi|124053907|gb|ABM89160.1| SHV type beta lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      S  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHSSPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITVSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|155049569|gb|ABS90365.1| extended spectrum beta-lactamase CTX-M-67 [Escherichia coli]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYSPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|148357346|gb|ABQ59093.1| TEM beta-lactamase [Acinetobacter baumannii]
          Length = 159

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 8/153 (5%)

Query: 6   VIIAMAMLSNIFPFLS-----IAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
              A  +     P          +       Y  LD N+G ++    P+  +   S  K+
Sbjct: 1   FFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKV 60

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +    V S +   +  L   I  S+N        +       MT+       I  S N  
Sbjct: 61  LLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTA 120

Query: 120 AVAIAESLCKTEK--KFVQHMNNTSKNLGLSAT 150
           A  +  ++   ++   F+ +M +    L     
Sbjct: 121 ANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEP 153


>gi|208503083|gb|ACI29348.1| extended spectrum CTX-M-86 beta-lactamase [Salmonella enterica
           subsp. enterica serovar Agona]
          Length = 291

 Score = 50.0 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPFAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|82655070|emb|CAJ19603.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 71/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAAFASPQPLEQVTRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDERLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKRVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSDRSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIAKI 276


>gi|7381165|gb|AAF61417.1|AF135373_1 class A beta-lactamase blaCARB-5 [Acinetobacter calcoaceticus
           subsp. anitratus]
          Length = 298

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 82/292 (28%), Gaps = 19/292 (6%)

Query: 5   LVIIAMAMLSNIF-----PFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTK 58
            + + +++ +N          +            + D  TG    E+  +  +  +S  K
Sbjct: 17  FLCLTLSLNANATDSVLEAVTNAETELGARIGLAVHDLETGKR-WEHKSNERFPLSSTFK 75

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST-MTLDNALKLLIVKSAN 117
            +    V   +   K  +   +  S++        +    G   M+L    +  +  S N
Sbjct: 76  TLACANVLQRVDLGKERIDRVVRFSESNLVTYSPVTEKHVGKKGMSLAELCQATLSTSDN 135

Query: 118 DIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             A  I +++   +   KF++ + + +  L    T    A    +    T    +  L  
Sbjct: 136 SAANFILQAIGGPKALTKFLRSIGDDTTRLDRWETELNEAVPGDKRDTTTPIAMVTTLEK 195

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +  +        Q++      +                  +TG        I A     
Sbjct: 196 LLIDETLSIKSRQQLESWLKGNEVGDALFRKGVPSDWIVADRTGAGGYGSRAITAVMWPP 255

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           ++  I   L   + +   +           N    K    I K    +N  N
Sbjct: 256 NRKPIVAALYITETDASFEE---------RNAVIAKIGEQIAKTVLMENSRN 298


>gi|146260122|gb|ABQ14402.1| beta-lactamase [uncultured soil bacterium]
          Length = 272

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 76/271 (28%), Gaps = 14/271 (5%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +    
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMG 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TLKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            +
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTM 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
              +   I VI     + T ++ +  +  +G
Sbjct: 241 PDGKPSRIVVIYTTGSQATMDERNRQIAEIG 271


>gi|228965490|ref|ZP_04126576.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228794220|gb|EEM41738.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 143

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%)

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             +           K   +        G DG++T F+    ++ V++A  GD  LI+VIL
Sbjct: 9   YQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNGNYSFVSTAKLGDTRLISVIL 68

Query: 245 GALDRNTRNKVSASLLSMGFY 265
            A + N     +  LL  GF 
Sbjct: 69  DADEENISFIETKKLLQYGFD 89


>gi|55824373|gb|AAV66328.1| beta-lactamase SHV-59 [Klebsiella pneumoniae]
          Length = 286

 Score = 50.0 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N +A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSVANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|315940013|gb|ADU56217.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|315940015|gb|ADU56218.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L     +         Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLSHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|48525543|gb|AAT45022.1| beta-lactamase KLUY-3 [Kluyvera sp. N03-0460]
 gi|56131251|gb|AAV80248.1| beta-lactamase KLUY-3 [Kluyvera sp. N03-0459]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +                 L+D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLATLEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIRPTDLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|315502186|ref|YP_004081073.1| d-alanyl-d-alanine
           carboxypeptidase/d-alanyl-d-alanine-endopeptidase
           [Micromonospora sp. L5]
 gi|315408805|gb|ADU06922.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micromonospora sp. L5]
          Length = 527

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 12  MLSNIFPFLSIAETNKLPY-YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           + + I   L+ +  N       ++DT TG  + +        PAS TKL+T+      L 
Sbjct: 39  LNATIDAVLADSRLNGAQAGVVVVDTTTGRTLYDRNGTRRLIPASNTKLLTSAAAMELLG 98

Query: 71  EKK 73
              
Sbjct: 99  PGH 101


>gi|24158843|pdb|1LI0|A Chain A, Crystal Structure Of Tem-32 Beta-Lactamase At 1.6 Angstrom
          Length = 263

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMISTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +    T A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|289433511|ref|YP_003463383.1| beta-lactamase family protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169755|emb|CBH26291.1| beta-lactamase family protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 259

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/233 (11%), Positives = 60/233 (25%), Gaps = 14/233 (6%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
                  + D     V+     D  +  AS+ KL      F  + + +  L T + IS +
Sbjct: 14  IHSKALYITDGK--QVLFAENEDQLYTAASVIKLPIYLYFFEKISKGELDLRTEVHISAD 71

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
                                  +L  +            +    +     ++    +  
Sbjct: 72  KVVAGAGIIQILPEK-----RTWRLEELLHLMIAVSDNTATNQLIDLATFSNLQAWIRAK 126

Query: 146 GLSATHFMNAHGVV---QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
           G   +  +    +       +  TA+    +   I     QY +  +        +++ +
Sbjct: 127 GWEQSVQIERKMMDFKSDKQNEITAKLAVTVFQEIIELSKQYPNLTETIRRPFLNQQHRS 186

Query: 203 TNWAVGTFLGADG----MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                    G  G     KTG       ++     +G+   +A +        
Sbjct: 187 NLTGTLEEAGIAGLSMLNKTGELKDIQHDVAIFEYEGETRFVAALTNNTGLEA 239


>gi|87309492|ref|ZP_01091627.1| hypothetical protein DSM3645_24360 [Blastopirellula marina DSM
          3645]
 gi|87287800|gb|EAQ79699.1| hypothetical protein DSM3645_24360 [Blastopirellula marina DSM
          3645]
          Length = 535

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 26/76 (34%), Gaps = 11/76 (14%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKL---------PYY--TLLDTNTGHVIAENYPDHPWN 52
           L  IA+++ +++   + +A                +   ++D  TG  +     D    
Sbjct: 11 ILPAIALSLTASVQAQVLLAPEVDAILQKPMYKDATWGLLVIDLETGDTVYSKNADKQLL 70

Query: 53 PASLTKLMTAYVVFSF 68
            S+ KL +  +    
Sbjct: 71 IGSIRKLFSVGLALDQ 86


>gi|296271401|ref|YP_003654033.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Thermobispora bispora DSM 43833]
 gi|296094188|gb|ADG90140.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Thermobispora bispora DSM 43833]
          Length = 451

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            + + +   +            ++D  TG V+ +     P  PAS TK++TA  V 
Sbjct: 60  TLAAKLTSVMGTPGLGPSVAGIVMDARTGAVLFDGRSGKPMTPASTTKVVTAAAVL 115


>gi|270208406|ref|YP_003329180.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
 gi|218546442|gb|ACK98831.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
          Length = 283

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 3   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 61  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 120

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 121 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 181 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 240

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 241 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 283


>gi|164665316|gb|ABY66120.1| CTX-m-14-like beta-lactamase [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFSQPQQNAESRRDVLASAARIIAEGL 291


>gi|56554763|gb|AAV97952.1| CTX-M type extended spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGRRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|56554767|gb|AAV97954.1| CTX-M type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGRRLGVPLIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|56554769|gb|AAV97955.1| CTX-M type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVPLIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|48525548|gb|AAT45026.1| beta-lactamase KLUY-2 [Kluyvera sp. N03-0461]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQRQQNAESRRDVLASAARIIAEGL 291


>gi|305667864|ref|YP_003864338.1| CTX-M-14 beta-lactamase [Escherichia coli]
 gi|310286432|ref|YP_003937693.1| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
 gi|8101042|gb|AAF72530.1|AF252622_1 beta-lactamase CTX-M-14 [Escherichia coli]
 gi|12044295|gb|AAG47784.1|AF311345_1 TOHO-2 like beta-lactamase [Escherichia coli]
 gi|14189984|gb|AAK55533.1|AF325133_1 cefotaxime-hydrolyzing beta-lactamase CTX-M-18 [Klebsiella
           pneumoniae]
 gi|15054448|dbj|BAB62310.1| class A beta-lactamase [Escherichia coli]
 gi|16304816|emb|CAC95170.1| CTX-M-14 beta-lactamase [Escherichia coli]
 gi|48525533|gb|AAT45014.1| beta-lactamase KLUY-1 [Kluyvera sp. N03-0458]
 gi|56201388|dbj|BAD72947.1| extended-spectrum beta-lactamase CTX-M-14 [Salmonella enterica
           subsp. enterica serovar Enteritidis]
 gi|62548342|gb|AAX86817.1| CTX-M-14 beta-lactamase [Salmonella enterica subsp. enterica
           serovar Panama]
 gi|68673209|emb|CAJ00135.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|68673217|emb|CAJ00138.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|68673224|emb|CAJ00141.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|68673232|emb|CAJ00145.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
 gi|83584428|gb|ABC24984.1| extended spectrum CTX-M-14 beta-lactamase [Klebsiella pneumoniae]
 gi|83584430|gb|ABC24985.1| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
 gi|84039855|gb|ABC49843.1| extended spectrum CTX-M-14 beta-lactamase [Providencia stuartii]
 gi|84657411|gb|ABC60033.1| extended spectrum beta-lactamase CTX-M-14 [Enterobacter cloacae]
 gi|86160844|gb|ABC86896.1| beta-lactamase CTX-M 14 [Shigella flexneri]
 gi|86160846|gb|ABC86897.1| beta-lactamase CTX-M 14 [Shigella sonnei]
 gi|86161574|gb|ABC86920.1| extended spectrum betalactamase CTX-M-14b [Escherichia coli]
 gi|126009707|gb|ABN64105.1| beta-lactamase CTX-M-14 [Citrobacter freundii]
 gi|133712508|gb|ABO37114.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|147712700|gb|ABQ45878.1| extended-spectrum beta-lactamase CTX-M-14 [Proteus mirabilis]
 gi|155573670|gb|ABU24286.1| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
 gi|157838786|gb|ABV82974.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|157838791|gb|ABV82978.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|161367440|gb|ABX71156.1| extended-spectrum beta-lactamase CTX-M-14b [Klebsiella pneumoniae]
 gi|164665314|gb|ABY66119.1| CTX-m-14-like beta-lactamase [Escherichia coli]
 gi|164689250|gb|ABY66904.1| beta-lactamase CTX-m-14-like [Escherichia coli]
 gi|213133714|gb|ACJ43256.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|213133724|gb|ACJ43261.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|213133730|gb|ACJ43264.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|214011887|gb|ACJ61682.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
 gi|214011889|gb|ACJ61683.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
 gi|214011891|gb|ACJ61684.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
 gi|221149281|gb|ACM04464.1| CTX-M-14 extended spectrum beta-lactamase [Escherichia coli]
 gi|260779992|gb|ACX50625.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|260779998|gb|ACX50628.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
 gi|260914769|gb|ACX54238.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914771|gb|ACX54239.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914773|gb|ACX54240.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914776|gb|ACX54242.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914779|gb|ACX54244.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914782|gb|ACX54246.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
 gi|260914785|gb|ACX54248.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
 gi|260914788|gb|ACX54250.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
 gi|260914791|gb|ACX54252.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914794|gb|ACX54254.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914797|gb|ACX54256.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914799|gb|ACX54257.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914805|gb|ACX54261.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
 gi|260914808|gb|ACX54263.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914810|gb|ACX54264.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|260914813|gb|ACX54266.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|268634794|gb|ACZ16616.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|268634800|gb|ACZ16621.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|268634810|gb|ACZ16629.1| beta-lactamase CTX-M-14 [Escherichia coli]
 gi|281333458|gb|ADA61018.1| CTX-M-14 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|295917910|gb|ADG60242.1| BlaCTX-M-14 [Escherichia coli]
 gi|304655613|emb|CBM42278.1| CTX-M-14 beta-lactamase [Escherichia coli]
 gi|308826761|emb|CBX36017.1| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
 gi|310780875|gb|ADK71043.2| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
 gi|325301872|gb|ADZ05828.1| CTX-M-14 beta-lactamase [Klebsiella pneumoniae]
 gi|329885287|gb|AEC05386.1| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|323709063|gb|ADY02546.1| beta-lactamase CTX-M-102 [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQREQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|8101040|gb|AAF72529.1|AF252621_1 beta-lactamase CTX-M-9a [Escherichia coli]
 gi|11178696|gb|AAF05311.2|AF174129_1 betalactamase CTX-M-9 [Escherichia coli]
 gi|16304826|emb|CAC95176.1| CTX-M-9 beta-lactamase [Escherichia coli]
 gi|71273545|emb|CAJ13580.1| beta-lactamase [Escherichia coli]
 gi|71361876|gb|AAZ30046.1| CTX-M-9 [Enterobacter cloacae]
 gi|130918110|gb|ABO32643.1| extended-spectrum beta-lactamase CTX-M-9 [Enterobacter aerogenes]
 gi|221149277|gb|ACM04461.1| CTX-M-9 extended-spectrum beta-lactamase [Escherichia coli]
 gi|299483206|gb|ADJ19345.1| beta-lactamase CTX-M [Escherichia coli]
 gi|300391796|gb|ADK11280.1| beta-lactamase CTX-M-9 [Enterobacter cloacae]
          Length = 291

 Score = 49.6 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|177667054|gb|ACB73258.1| inhibitor-resistant beta-lactamase SHV-56 [Klebsiella pneumoniae]
          Length = 286

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         +TG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADRTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|124021058|gb|ABM88809.1| beta-lactamase CTX-M-14 [Escherichia coli]
          Length = 290

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 72/282 (25%), Gaps = 24/282 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
           +A      +  L+ V         A  R      +A +++ G
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEG 290


>gi|30171149|gb|AAO59455.1| beta-lactamase CARB-8 [Oligella urethralis]
          Length = 298

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 82/292 (28%), Gaps = 19/292 (6%)

Query: 5   LVIIAMAMLSNIF-----PFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTK 58
            + + +++ +N          +            + D  TG    E+  +  +  +S  K
Sbjct: 17  FLCLTLSLNANATDSVLEAVTNAETELGARIGLAVHDLETGKR-WEHKSNERFPLSSTFK 75

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST-MTLDNALKLLIVKSAN 117
            +    V   +   K  +   +  S++        +    G   M+L    +  +  S N
Sbjct: 76  TLACANVLQRVDLGKERIDRVVRFSESNLVTYSPVTEKHVGKKGMSLAELCQATLSTSDN 135

Query: 118 DIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             A  I +++   +   KF++ + + +  L    T    A    +    T    +  L  
Sbjct: 136 SAANFILQAIGGPKALTKFLRSIGDDTTRLDRWETELNEAVPGDKRDTTTPIAMVTTLEK 195

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +  +        Q++      +                  +TG        I A     
Sbjct: 196 LLIDETLSIKSRQQLESWLKGNEVGDALFRKGVPSDWIVADRTGAGGYGSRAITAVMWPP 255

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           ++  I   L   + +   +           N    K    I K    +N  N
Sbjct: 256 NRKPIVAALYITETDASFEE---------RNAVIAKIGEQIAKTILMENSRN 298


>gi|312959134|ref|ZP_07773653.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Pseudomonas fluorescens WH6]
 gi|311286904|gb|EFQ65466.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Pseudomonas fluorescens WH6]
          Length = 511

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 13/78 (16%)

Query: 3   QFLVIIAMAMLSNIFPFLS-----------IAETNKLPYYTLL--DTNTGHVIAENYPDH 49
           ++L ++ M+ L      +S                     +L+  D  +G  + ++ P  
Sbjct: 36  RWLHLLCMSFLLAGCASVSPSSTATLDQLLADPALNGATVSLMVRDARSGDTLYQHNPHT 95

Query: 50  PWNPASLTKLMTAYVVFS 67
              PAS  KL+T      
Sbjct: 96  RLVPASNLKLLTTAAAME 113


>gi|51105097|gb|AAT97108.1| extended-spectrum beta-lactamase SHV-5 [Escherichia coli]
 gi|51105101|gb|AAT97110.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|51105103|gb|AAT97111.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|51105107|gb|AAT97113.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|51105111|gb|AAT97115.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|51105113|gb|AAT97116.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|51105115|gb|AAT97117.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
 gi|51105117|gb|AAT97118.1| extended-spectrum beta-lactamase SHV-5 [Klebsiella pneumoniae]
          Length = 286

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           M    + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MLYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----ASKRGARGIVALLGPNNKAER 253


>gi|46309188|emb|CAG25817.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|46309210|emb|CAG25828.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 56/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ + +    L    T 
Sbjct: 93  SEKHLVDGMTIGELCAAAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   +           Q+    +  +       AV    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG   +  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPDGKPER 241


>gi|221149272|gb|ACM04459.1| SHV-109 beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 68/260 (26%), Gaps = 21/260 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPA 54
           R  + ++A   L+       + +  +             +D  +G  +     D  +   
Sbjct: 6   RCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMM 65

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K++    V + +      L   I   +         S       MT+       I  
Sbjct: 66  STFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITM 125

Query: 115 SANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           S N  A  +            F++ + +    L    T    A         T A   A 
Sbjct: 126 SDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAAT 185

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L   + +         Q+    +  +       +V         KTG            A
Sbjct: 186 LRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------A 233

Query: 233 IQGDQSLIAVILGALDRNTR 252
            +     I  +LG  ++  R
Sbjct: 234 GERGARGIVALLGPNNKAER 253


>gi|160858186|emb|CAI30650.2| beta-lactamase SHV-61 [Klebsiella pneumoniae]
          Length = 286

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 68/260 (26%), Gaps = 21/260 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPA 54
           R  + ++A   L+       + +  +             +D  +G  +     D  +   
Sbjct: 6   RCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMM 65

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K++    V + +      L   I   +         S       MT+       I  
Sbjct: 66  STFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITM 125

Query: 115 SANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           S N  A  +            F++ + +    L    T    A         T A   A 
Sbjct: 126 SDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAAT 185

Query: 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
           L   + +         Q+    +  +       +V         KTG            A
Sbjct: 186 LRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------A 233

Query: 233 IQGDQSLIAVILGALDRNTR 252
            +     I  +LG  ++  R
Sbjct: 234 GERGARGIVALLGPNNKAER 253


>gi|239909269|gb|ACS32293.1| extended spectrum beta-lactamase CTX-M-74 [Enterobacter cloacae]
          Length = 291

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  + T   
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTETTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|157676816|emb|CAJ32371.1| beta-lactamase [Escherichia coli]
          Length = 277

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         +TG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADRTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|57157567|dbj|BAD83773.1| beta-lactamase CTX-M-35 [Klebsiella pneumoniae]
 gi|57157569|dbj|BAD83774.1| beta-lactamase CTX-M-35 [Escherichia coli]
 gi|57157571|dbj|BAD83775.1| beta-lactamase CTX-M-35 [Klebsiella oxytoca]
          Length = 291

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  + +   
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTESTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|254839212|pdb|2ZQ7|A Chain A, Apo Structure Of Class A Beta-Lactamase Toho-1
           E166aR274NR276N TRIPLE MUTANT
 gi|254839214|pdb|2ZQ9|A Chain A, Cephalothin Acyl-Intermediate Structure Of Class A Beta-
           Lactamase Toho-1 E166aR274NR276N TRIPLE MUTANT
 gi|254839215|pdb|2ZQA|A Chain A, Cefotaxime Acyl-Intermediate Structure Of Class A
           Beta-Lacta Toho-1 E166aR274NR276N TRIPLE MUTANT
 gi|254839216|pdb|2ZQC|A Chain A, Aztreonam Acyl-Intermediate Structure Of Class A
           Beta-Lactam Toho-1 E166aR274NR276N TRIPLE MUTANT
 gi|254839217|pdb|2ZQD|A Chain A, Ceftazidime Acyl-Intermediate Structure Of Class A
           Beta-Lact Toho-1 E166aR274NR276N TRIPLE MUTANT
          Length = 262

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 69/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +A    
Sbjct: 85  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTAPTLN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 145 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 204

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +RN     +A +++ GF
Sbjct: 205 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAENRNDILAAAAKIVTHGF 262


>gi|254514620|ref|ZP_05126681.1| beta-lactamase [gamma proteobacterium NOR5-3]
 gi|219676863|gb|EED33228.1| beta-lactamase [gamma proteobacterium NOR5-3]
          Length = 334

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 3/102 (2%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G ++     D P+  AS  K+  A  +   + + +  L   + +   A  +    ++   
Sbjct: 65  GRILV--NADEPFPMASTYKIPIAITLLRRIDQGELRLDQLVPVPDEAVVFSQIIASAFP 122

Query: 99  GSTMTLDNALKLLIVKSA-NDIAVAIAESLCKTEKKFVQHMN 139
            S +T+  A  + ++ +  ++ A  I   L    +   + M 
Sbjct: 123 HSGVTISVANLIEVMITYSDNTATDICLELAGGPEAVTKTMR 164


>gi|18129361|emb|CAD20591.1| beta-lactamase class A [Kluyvera ascorbata]
          Length = 291

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESNKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIQAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|75465013|sp|Q9EZQ7|BLAC_NOCAS RecName: Full=Beta-lactamase AST-1; Flags: Precursor
 gi|12006348|gb|AAG44836.1|AF279904_1 class A beta-lactamase AST-1 [Nocardia asteroides]
          Length = 310

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 65/248 (26%), Gaps = 6/248 (2%)

Query: 9   AMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++   +   P  +  ET          +DT +G     +  D  +  AS  K +    + 
Sbjct: 44  SVTTSAVADPRFAELETTSGARLGVFAVDTGSGRT-VAHRADERFPMASTFKGLACGALL 102

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE- 125
                        I  S          +  +  + MT+       I  S N     + + 
Sbjct: 103 REHPLSTGYFDQVIHYSAAELVEYSPVTETRVETGMTVRELCDAAITVSDNTAGNQLLKL 162

Query: 126 -SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQY 184
               +     ++ + + +  L    T    A    +    T A   A     +  D    
Sbjct: 163 LGGPEGFTASLRSLGDATSRLDRWETDLNTAIPGDERDTTTPAALAADYRALVVGDVLGA 222

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
               Q+K   +          A        G KTG         VA A    +  ++  +
Sbjct: 223 PERDQLKAWLVANTTGATRIRAGLPADWTVGDKTGSPAYGSALDVAVAWPPGRAPIVIAV 282

Query: 244 LGALDRNT 251
           L       
Sbjct: 283 LSTKSEQD 290


>gi|18129359|emb|CAD20590.1| beta-lactamase class A [Kluyvera ascorbata]
 gi|82569006|emb|CAJ31231.1| beta-lactamase KLUA-9 [Kluyvera ascorbata]
          Length = 291

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIQAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAIIWPENHAPLVLVTYFTQPDQKAESRRDVLAAAAKIVTHGF 291


>gi|30409762|gb|AAO61597.1| beta-lactamase CTX-M-27 [Escherichia coli]
 gi|164665312|gb|ABY66118.1| CTX-m-14-like beta-lactamase [Escherichia coli]
 gi|196127864|gb|ACG70200.1| CTX-M-27 beta-lactamase [Escherichia coli]
 gi|213133726|gb|ACJ43262.1| CTX-M-27 extended-spectrum beta-lactamase [Escherichia coli]
 gi|213133728|gb|ACJ43263.1| CTX-M-27 extended-spectrum beta-lactamase [Escherichia coli]
 gi|213133732|gb|ACJ43265.1| CTX-M-27 extended-spectrum beta-lactamase [Escherichia coli]
 gi|221149289|gb|ACM04467.1| CTX-M-27 extended-spectrum beta-lactamase [Escherichia coli]
 gi|260779990|gb|ACX50624.1| CTX-M-27 extended-spectrum beta-lactamase [Escherichia coli]
 gi|260779994|gb|ACX50626.1| CTX-M-27 extended-spectrum beta-lactamase [Escherichia coli]
 gi|282192948|gb|ADA81877.1| extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|323710402|gb|ADY02602.1| beta-lactamase blaTEM [Shigella dysenteriae 2a]
          Length = 263

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 2/123 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 30  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 89

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 90  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 149

Query: 148 SAT 150
              
Sbjct: 150 WEP 152


>gi|134133921|gb|ABO61018.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 298

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 58/203 (28%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G     +  D  +   S  K M A  V S  +   A+L T + +          
Sbjct: 57  LLDTASGRR-FGHRQDERFPMCSTFKSMLAATVLSQAERTPALLDTRVPVRDADLLSHAP 115

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +          
Sbjct: 116 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDAVSRSDRLEP 175

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A     L   +  +  Q     Q+    I  +       A    
Sbjct: 176 ELNSFAEGDPRDTTTPAAMAMTLQRVMMGEVLQPASRQQLADWLIDNETGDACLRAGLGK 235

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 236 RWRVGDKTGSNGEDARNDIAVLW 258


>gi|208503047|gb|ACI29346.1| extended spectrum CTX-M-84 beta-lactamase [Salmonella enterica
           subsp. enterica serovar Derby]
          Length = 291

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVAWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|198042727|gb|ABV83044.3| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 58/203 (28%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G     +  D  +   S  K M A  V S  +   A+L T + +          
Sbjct: 62  LLDTASGRR-FGHRQDERFPMCSTFKSMLAATVLSQAERTPALLDTRVPVRDADLLSHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +          
Sbjct: 121 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDAVSRSDRLEP 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A     L   +  +  Q     Q+    I  +       A    
Sbjct: 181 ELNSFAEGDPRDTTTPAAMAMTLQRVMMGEVLQPASRQQLADWLIDNETGDACLRAGLGK 240

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 241 RWRVGDKTGSNGEDARNDIAVLW 263


>gi|68165961|gb|AAY87934.1| TEM-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 156

 Score = 49.6 bits (116), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 2/123 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 27  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 86

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 87  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 146

Query: 148 SAT 150
              
Sbjct: 147 WEP 149


>gi|15858854|gb|AAK32961.1| beta-lactamase CTX-M-16 [Escherichia coli]
          Length = 291

 Score = 49.6 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGGYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|60359800|dbj|BAD90119.1| beta-lactamase CTX-M-63 [Klebsiella pneumoniae]
 gi|189304727|gb|ACD86346.1| blaCTX-M-63 [Morganella morganii]
          Length = 290

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 69/256 (26%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
            +    +++L    P  + A   +     L            +D  +    +     D  
Sbjct: 10  LMTTACISLLLGSAPLYAQANDVQQKLAALEKSSGGRLGVALIDTADNAQTLY--RADER 67

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L+  + I  +        +      TMTL      
Sbjct: 68  FAMCSTSKVMAAAAVLKQSETQKNVLSQKVEIKSSDLINYNPIAEKHVNGTMTLAELSAA 127

Query: 111 LIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +   L   +K   F + + + +  L  +      A         T   
Sbjct: 128 ALQYSDNTAMNKLIAHLGGPDKVTAFARAIGDDTFRLDRTEPTLNTAIPGDPRDTTTPLA 187

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 188 MAQTLRHLTLGSALGETQRAQLVTWLKGNTTGAASIQAGLPTSWVVGDKTGSGDYGTTND 247

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  LI V 
Sbjct: 248 IAVIWPEGRAPLILVT 263


>gi|323691461|ref|ZP_08105733.1| hypothetical protein HMPREF9475_00595 [Clostridium symbiosum
           WAL-14673]
 gi|323504507|gb|EGB20297.1| hypothetical protein HMPREF9475_00595 [Clostridium symbiosum
           WAL-14673]
          Length = 252

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 73/243 (30%), Gaps = 15/243 (6%)

Query: 26  NKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
            +     ++ D  TG    E   D  +  ASL K+     +F   KE +  L   I + K
Sbjct: 10  IEGKKAIVIEDLKTGEA-VEINRDEVFPAASLIKVPVLSALFRMAKENQIALDERIELEK 68

Query: 85  NASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           ++             G    + +   L+I  S N  A  + + +       +  +N+  +
Sbjct: 69  DSRIGGFGILKDLGDGLNPAVRDLAVLMITLSDNIAANLLIDRI------GMSQINSELQ 122

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +G      +    +          +        K         F+   L+I  ++  N 
Sbjct: 123 AMG-MKHTVLQRKMMDSQAKERGLDNYTSAGDMQKLMKAILESSFRGDILDILFRQQCNN 181

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR-----NKVSAS 258
                   G              +        D+ +IA++L     + R     N+    
Sbjct: 182 KLPALMEGGVRFAHKTGDLPGVEHDAGIICTDDREIIAIVLTDELADNREGIWLNQEIGK 241

Query: 259 LLS 261
           L++
Sbjct: 242 LIN 244


>gi|226432217|gb|ACO55654.1| TER-2 beta-lactamase [Raoultella terrigena]
          Length = 284

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 67/232 (28%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A   PD  +   S  K+     V + +   +  L   +   +         
Sbjct: 45  LDLASGRLLASYRPDERFPMMSTFKVPLCAAVLARVDAGEEKLDRRVRYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +       MT+       I  S N  A  +  +    +    F++   + +  L    T 
Sbjct: 105 TEKHLADGMTVAELCAAAITLSDNTAANLLLASVGGPQGLTAFLRRSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   +  K       +     
Sbjct: 165 LNEALPGDARDTTTPQAMAKTLRNLLTGSVLSAASRQQLRSWMVDDKVAGPLLRSALPHG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
                KTG        I+A+     Q   ++ + L G     + RN+  A +
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGQPARIVIIYLTGTEASMDERNRQIAEI 276


>gi|315940011|gb|ADU56216.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  + +   +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQSSAVRQKLAALEKSSGGRQGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|4218927|gb|AAD12233.1| oxacillinase [Ralstonia pickettii]
          Length = 274

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 55/211 (26%), Gaps = 2/211 (0%)

Query: 32  TLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  TG  V+ E   D    PAS  KL  A + F     K            +     
Sbjct: 28  IVADAATGKAVLHEGKCDERVTPASTFKLALAVMGFDHGFLKDEHTPVEHFRHGDPDWGG 87

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +       +     + +      +    A      + K     +    +  KN G+  +
Sbjct: 88  EAWHQPIDPALWLKYSVVWYSQRITHAMGAQTFQAYVRKLGYGNMDVSGDPGKNNGMDRS 147

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              ++  +         R +      +     + +           G          G  
Sbjct: 148 WITSSLKISPEEQVGLMRRIVNRQLPVSAHTYEMLDRTVQTWQVPGGWAVQGKTGTAGPA 207

Query: 211 LGADGMKTGFTCASGFN-IVASAIQGDQSLI 240
            G       +  A  +   V  A +GD++ +
Sbjct: 208 PGNTSPDGTWDQAHAYGWFVGWARKGDKTYV 238


>gi|327440901|dbj|BAK17266.1| D-alanyl-D-alanine carboxypeptidase [Solibacillus silvestris
          StLB046]
          Length = 472

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 9/68 (13%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL--------PYYTLL-DTNTGHVIAENYPDHPW 51
          M++   ++ +  L    P  S A  N               + D  +G ++     D   
Sbjct: 1  MKKIFQLVILLALFFSLPIQSFASINGAVTTHLGKSNAAVTIRDAESGKIVYSQNGDKLM 60

Query: 52 NPASLTKL 59
           PAS  KL
Sbjct: 61 RPASNMKL 68


>gi|82655076|emb|CAJ19606.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAAFASPPPLEQVTRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|317507764|ref|ZP_07965468.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253963|gb|EFV13329.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Segniliparus rugosus ATCC BAA-974]
          Length = 442

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           ++     L            +LD  +G V+ +   D    PAS  KL+TA
Sbjct: 53  VAAALDPLGENPVLARFSGVVLDGASGQVLWQRDADAAMTPASTMKLVTA 102


>gi|224370116|ref|YP_002604280.1| DacB [Desulfobacterium autotrophicum HRM2]
 gi|223692833|gb|ACN16116.1| DacB [Desulfobacterium autotrophicum HRM2]
          Length = 393

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 3  QFLVIIAMAMLSNIFP-FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
          ++++++ +AM     P  ++         Y + D++ G V+    PD  + PAS  KL+T
Sbjct: 6  KWILLLFLAMALVQSPGAIAGTPKI---GYLVADSH-GKVMDALNPDQAFVPASTFKLLT 61

Query: 62 AYVVFSF 68
          A   F+ 
Sbjct: 62 ALGAFNE 68


>gi|146260202|gb|ABQ14429.1| beta-lactamase [uncultured soil bacterium]
          Length = 268

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 75/268 (27%), Gaps = 17/268 (6%)

Query: 7   IIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWNPAS 55
            +     +   P  +  ET                Y  LD N+G ++    P+  +   S
Sbjct: 1   ALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
             K++    V S +   +  L   I  S+N        +       MT+       I  S
Sbjct: 61  TFKVLLRGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMS 120

Query: 116 ANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N  A  +  ++   ++   F+ +M +    L         A    +            L
Sbjct: 121 DNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
              +  +        Q+       K       +          K+G        I+A+  
Sbjct: 181 RKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALG 240

Query: 234 QGDQS---LIAVILGAL-DRNTRNKVSA 257
              +    +I    G+    + RN+  A
Sbjct: 241 PDGKPSRIVIIYTTGSQATMDERNRQIA 268


>gi|14189986|gb|AAK55534.1|AF325134_1 ceftazidime-hydrolyzing beta-lactamase CTX-M-19 [Klebsiella
           pneumoniae]
 gi|27462658|gb|AAO15538.1|AF458080_8 extended-spectrum beta-lactamase CTX-M-19 [Klebsiella pneumoniae]
          Length = 291

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  + +    A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTESTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|76057847|emb|CAG25815.2| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 71/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
              +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LFSLIAALPLAVFASPQPLEQVTRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|21465760|pdb|1JWZ|A Chain A, Crystal Structure Of Tem-64 Beta-Lactamase In Complex With
           A Boronic Acid Inhibitor (105)
          Length = 263

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 3/237 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 20  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVK 79

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 80  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDS 139

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  A    +    T A     L   +  +        Q+       K       + 
Sbjct: 140 WEPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA 199

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALDRNTRNKVSASLLSMG 263
                    K+G        I+A+     +   I VI     + T ++ +  +  +G
Sbjct: 200 LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIG 256


>gi|218091990|emb|CAP58291.1| beta-lactamase [Klebsiella pneumoniae]
 gi|223635899|emb|CAQ03507.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         K G        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKAG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|90418307|ref|ZP_01226219.1| putative D-alanyl-D-alanine carboxypeptidase [Aurantimonas
          manganoxydans SI85-9A1]
 gi|90337979|gb|EAS51630.1| putative D-alanyl-D-alanine carboxypeptidase [Aurantimonas
          manganoxydans SI85-9A1]
          Length = 409

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNK--LPY--YTLLDTNTGHVIAENYPDHPWNPASLTK 58
          + L  +   +L     F  + +      P     +LD + G+ +     D P+ PAS+ K
Sbjct: 17 RLLATVFAVLLLQAPAFADVKDRIASLAPSGLVFVLDED-GNELLAQNADQPFVPASVAK 75

Query: 59 LMTAYVVFSF 68
          L+TA++    
Sbjct: 76 LVTAWLAMEE 85


>gi|90421252|ref|ZP_01229148.1| conserved hypothetical protein [Aurantimonas manganoxydans
          SI85-9A1]
 gi|90334493|gb|EAS48283.1| conserved hypothetical protein [Aurantimonas manganoxydans
          SI85-9A1]
          Length = 227

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNK--LPY--YTLLDTNTGHVIAENYPDHPWNPASLTK 58
          + L  +   +L     F  + +      P     +LD + G+ +     D P+ PAS+ K
Sbjct: 17 RLLATVFAVLLLQAPAFADVKDRIASLAPSGLVFVLDED-GNELLAQNADQPFVPASVAK 75

Query: 59 LMTAYVVFSF 68
          L+TA++    
Sbjct: 76 LVTAWLAMEE 85


>gi|6137226|gb|AAF04388.1|AF189721_1 beta-lactamase CTX-M-8 precursor [Citrobacter amalonaticus]
          Length = 291

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 78/283 (27%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
            +    +++L    P  + A   +     L            +D  +    +     D  
Sbjct: 11  LMTTACISLLLGSAPLYAQANDVQQKLAALEKSSGGRLGVALIDTADNAQTLY--RADER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L+  + I  +        +      TMTL      
Sbjct: 69  FAMCSTSKVMAAAAVLKQSETQKKVLSQKVEIKSSDLINYNPITEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +   L   +K   F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAHLGGPDKVTAFARAIGDNTFRLDRTEPTLNTAIPGDPRDTTTPLA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRNLTLGSALGETQRAQLVTWLKGNTTGAASIQAGLPTSWVVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  LI V         A  R      +A +++ G+
Sbjct: 249 IAVIWPEGRAPLILVTYFTQPEQKAESRRDVLAAAAKIVTDGY 291


>gi|257359515|gb|ACV53157.1| beta-lactamase SHV-121 [Klebsiella pneumoniae]
 gi|283135094|dbj|BAI65841.1| SHV 121 betalactamase [Klebsiella pneumoniae subsp. pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLAALPLVVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITVSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|56554771|gb|AAV97956.1| CTX-M type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 291

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTNAVQQKLAALEKSSGGRLGVPLIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|56554765|gb|AAV97953.1| CTX-M type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 291

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTNAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|18129363|emb|CAD20592.1| beta-lactamase class A [Kluyvera ascorbata]
          Length = 291

 Score = 49.2 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 65/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIQAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG         +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSVDYGPTTHIAIIWPENHAPLVLVTYFTQPDQKAESRRDVLAAAAKIVTHGF 291


>gi|302544950|ref|ZP_07297292.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Streptomyces hygroscopicus ATCC 53653]
 gi|302462568|gb|EFL25661.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Streptomyces himastatinicus ATCC 53653]
          Length = 521

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 28 LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
               + D ++G V+  +  D    PAS TKL T+    
Sbjct: 57 AAGVVVADADSGDVLYRHRADDRLMPASNTKLFTSAAAM 95


>gi|315940009|gb|ADU56215.1| CTX-M-14 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVRQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|82655062|emb|CAJ19599.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
 gi|82655064|emb|CAJ19600.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSDRSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIAKI 276


>gi|190576921|ref|YP_001966253.1| beta-lactamase [Klebsiella pneumoniae]
 gi|110264505|gb|ABG56868.1| beta-lactamase [Klebsiella pneumoniae]
 gi|156601491|gb|ABU86827.1| beta-lactamase [Klebsiella pneumoniae]
 gi|157849628|gb|ABV89601.1| beta-lactamase LAP-2 [Enterobacter cloacae]
 gi|170284256|gb|ACB12416.1| beta-lactamase LAP-2 [Klebsiella pneumoniae]
 gi|170284258|gb|ACB12417.1| beta-lactamase LAP-2 [Klebsiella pneumoniae]
 gi|170284260|gb|ACB12418.1| beta-lactamase LAP-2 [Klebsiella pneumoniae]
 gi|170284262|gb|ACB12419.1| beta-lactamase LAP-2 [Escherichia coli]
          Length = 285

 Score = 49.2 bits (115), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 71/266 (26%), Gaps = 26/266 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLDTNTGHVIAENYPD 48
           M++  +II   +     P LS                     +T +D  +G V++ +  +
Sbjct: 1   MKKIRLIIISLLAGMCTPALSTPVNVTDTIQSTEDHIKGRVGFTEIDFLSGKVLSSHRRE 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K++    +   + +    L   IT +K+  +     ++      MT+    
Sbjct: 61  ERFPMMSTFKVLLCGAILVRVDKGLEQLERRITYNKHDLDDYSPLTSQHIADGMTVSELC 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
              I  S N  A  +  ++   E       +       L                 TT  
Sbjct: 121 NAAITTSDNTAANLLLSTIGGPEGLTHFLRSTGDSYTRLDRHEPSLNEAKPGDERDTTTP 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCASGF 226
                + +   +        + K +    +                    KTG       
Sbjct: 181 AAMAQTLQKLLNESVLTEKSRKKLISWMQEDKVGGPLFRSVLPAGWMIADKTG------- 233

Query: 227 NIVASAIQGDQSLIAVILGALDRNTR 252
                A       I  +LG   + +R
Sbjct: 234 -----AGDHGSRGIVALLGPGGKPSR 254


>gi|312888743|ref|ZP_07748307.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Mucilaginibacter paludis DSM 18603]
 gi|311298743|gb|EFQ75848.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Mucilaginibacter paludis DSM 18603]
          Length = 469

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 16/81 (19%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAEN 45
          M++ L I +  +         + +  +                   T+LD  TG  I   
Sbjct: 1  MKRLL-IFSFCLAGGFSFAQVLPQKLQAAFNRLQQDSQSRYASVSLTVLDAKTGEQIFAV 59

Query: 46 YPDHPWNPASLTKLMTAYVVF 66
           P+    PAS  K +T+   F
Sbjct: 60 NPNMGLAPASTLKTVTSITAF 80


>gi|193227727|emb|CAQ42480.1| beta-lactamase [Kluyvera ascorbata]
          Length = 291

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIQAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAIIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTRGF 291


>gi|148524825|dbj|BAF63422.1| cefotaximase [Shigella sonnei]
 gi|256576422|gb|ACU87985.1| extended-spectrum beta-lactamase CTX-M-64 [Enterobacter cloacae]
 gi|256576426|gb|ACU87987.1| extended-spectrum beta-lactamase CTX-M-64 [Escherichia coli]
          Length = 291

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 70/261 (26%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +K +L  P+ I           +      TMTL 
Sbjct: 64  RADERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLA 123

Query: 106 NALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +            F + + + +  L  +      A        
Sbjct: 124 ELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            T       L               Q+            +  A        G KTG    
Sbjct: 184 TTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|116643125|gb|ABK06382.1| beta-lactamase bla-CTX-M-14 [Escherichia coli]
          Length = 288

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 70/279 (25%), Gaps = 24/279 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLL 260
           +A      +  L+ V         A  R      +A ++
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARII 287


>gi|197724703|emb|CAP12353.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAAFASPPPLEQVTRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|322366620|gb|ADW95390.1| beta-lactamase SHV-12 [Salmonella enterica subsp. enterica serovar
           Rissen]
          Length = 265

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 21/257 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASLT 57
           + ++A   L+       + +  +             +D  +G  +     D  +   S  
Sbjct: 1   ISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMSTF 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K++    V + +      L   I   +         S       MT+       I  S N
Sbjct: 61  KVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDN 120

Query: 118 DIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             A  +            F++ + +    L    T    A         T A   A L  
Sbjct: 121 SAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRK 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            + +         Q+    +  +       +V         KTG            A + 
Sbjct: 181 LLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------ASKR 228

Query: 236 DQSLIAVILGALDRNTR 252
               I  +LG  ++  R
Sbjct: 229 GARGIVALLGPNNKAER 245


>gi|209413818|emb|CAQ42481.2| CTX-M-78 beta-lactamase [Kluyvera georgiana]
          Length = 291

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 30/292 (10%)

Query: 1   MRQ------FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHV 41
           MR+       +    +++L    P  + A   +     L            ++  +    
Sbjct: 2   MRKSVRRAILMTTACVSLLLASVPLYAQANDIQQKLAALEKSSGGRLGVALINTADNTQT 61

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M A  V    + +K +L+  + I  +        +      T
Sbjct: 62  LY--RADERFAMCSTSKVMAAAAVLKQSETQKDLLSQRVEIKSSDLINYNPIAEKHVNGT 119

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       +  S N     +   L    K   F + + + +  L  +      A    
Sbjct: 120 MTLGELSAAALQYSDNTAMNKLIAHLGGPGKVTAFARVIGDDTFRLDRTEPTLNTAIPGD 179

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T       L      +        Q+            +  A        G KTG
Sbjct: 180 PRDTTTPLAMAQTLRNLTLGNALGDTQRAQLVTWLKGNTTGAASIQAGLPTSWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A      +  L+ V         A  R      +A +++ G+
Sbjct: 240 SGDYGTTNDIAVIWPEGRAPLVLVTYFTQPEPKAESRRDVLAAAARIVTDGY 291


>gi|254499370|ref|ZP_05112038.1| putative D-alanyl-meso-diaminopimelate endopeptidase [Legionella
          drancourtii LLAP12]
 gi|254351399|gb|EET10266.1| putative D-alanyl-meso-diaminopimelate endopeptidase [Legionella
          drancourtii LLAP12]
          Length = 470

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
             + D  TG VI     +    PAS TKL TA     ++K 
Sbjct: 30 GVLIKDAQTGEVIYSRNANKLLTPASSTKLFTAAAALYYIKP 71


>gi|197724705|emb|CAP12354.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 49.2 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAAFASPQPLEQVTRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|319948648|ref|ZP_08022771.1| D-alanyl-D-alanine carboxypeptidase [Dietzia cinnamea P4]
 gi|319437676|gb|EFV92673.1| D-alanyl-D-alanine carboxypeptidase [Dietzia cinnamea P4]
          Length = 452

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 24/56 (42%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           A L  I   L+          +++D  TG V+ E  P     PAS TKL+TA    
Sbjct: 62  AALERILTPLARDPAVGDLTASVVDDATGQVLWEVRPREAKVPASTTKLLTAVAAM 117


>gi|117938018|gb|ABK58097.1| beta-lactamase LAP-1 [Enterobacter cloacae]
          Length = 285

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 71/266 (26%), Gaps = 26/266 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLDTNTGHVIAENYPD 48
           M++  +II   +     P LS                     +T +D  +G V++ +  +
Sbjct: 1   MKKIRLIIISLLAGMCTPALSTPVNVTDTIQSTEDHIKGRVGFTEIDFLSGKVLSSHRRE 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K++    +   + +    L   IT +K+  +     ++      MT+    
Sbjct: 61  ERFPMMSTFKVLLCGAILVRVDKGLEQLERRITYNKHDLDDYSPLTSQHIADGMTVSELC 120

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
              I  S N  A  +  ++   E       +       L                 TT  
Sbjct: 121 NAAITTSDNTAANLLLSTIGGPEGLTHFLRSTGDSYTRLDRHEPSLNEAKPGDERDTTTP 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCASGF 226
                + +   +        + K +    +                    KTG       
Sbjct: 181 AAMAQTLQKLLNGSVLTEKSRKKLISWMQEDKVGGPLFRSVLPAGWMIADKTG------- 233

Query: 227 NIVASAIQGDQSLIAVILGALDRNTR 252
                A       I  +LG   + +R
Sbjct: 234 -----AGDHGSRGIVALLGPGGKPSR 254


>gi|288190918|gb|ADC43821.1| extended spectrum beta-lactamase TEM-1 [Klebsiella pneumoniae]
          Length = 212

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 2/140 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 25  GYIELDLNSGKILESFRPEERFPXMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 84

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 85  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR 144

Query: 148 SATHFMNAHGVVQHGHYTTA 167
                  A    +      A
Sbjct: 145 WEPELNEAIPNDERDTTMPA 164


>gi|302865639|ref|YP_003834276.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micromonospora aurantiaca ATCC 27029]
 gi|302568498|gb|ADL44700.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micromonospora aurantiaca ATCC 27029]
          Length = 527

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 12  MLSNIFPFLSIAETNKLPY-YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           + + I   L+ +  N       ++DT TG  + +        PAS TKL+T+      L 
Sbjct: 39  LNATIDAVLADSRLNGAQAGVVVVDTATGRTLYDRNGTRRLIPASNTKLLTSAAAMELLG 98

Query: 71  EKK 73
              
Sbjct: 99  PGH 101


>gi|224814396|gb|ACN65418.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 71/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L        + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLVAFASPQPLEQVTRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|25071200|ref|NP_608309.2| beta-lactamase Oxa9 [Klebsiella pneumoniae]
 gi|143955309|sp|P0A3M3|BLO9_KLEPN RecName: Full=Beta-lactamase OXA-9; AltName: Full=Oxacillinase;
           AltName: Full=Penicillinase; Flags: Precursor
 gi|166214909|sp|P0A3M4|BLO9_ENTAE RecName: Full=Beta-lactamase OXA-9; AltName: Full=Oxacillinase;
           AltName: Full=Penicillinase; Flags: Precursor
 gi|25056131|gb|AAL93143.2|AF479774_7 beta-lactamase Oxa9 [Klebsiella pneumoniae]
 gi|25056128|gb|AAA98406.2| Oxa9 [Klebsiella pneumoniae]
 gi|27902587|gb|AAO24600.1| Oxa-9 [Enterobacter cloacae]
          Length = 274

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 69/246 (28%), Gaps = 12/246 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYP-DHPWNPASLT 57
           M++ L++  +  +S   P  S+A      L    + D  TG+ + E        +P S  
Sbjct: 1   MKKILLLHMLVFVSATLPISSVASDEVETLKCTIIADAITGNTLYETGECARRVSPCSSF 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A + F     +     T     +               +    D+ +      ++ 
Sbjct: 61  KLPLAIMGFDSGILQSPKSPTWELKPEYNPSPRDRTYKQVYPALWQSDSVVWFSQQLTSR 120

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                  E + K E        ++ K+ GL          ++     +    +  L   +
Sbjct: 121 LGVDRFTEYVKKFEYGNQDVSGDSGKHNGL------TQSWLMSSLTISPKEQIQFLLRFV 174

Query: 178 KTDFPQYMHYFQIKGLEIKGKK-YPNTNWAVGTFLGADGMKTGFTCASGFN--IVASAIQ 234
               P     + +    I   +          +  G      G    S      V  A +
Sbjct: 175 AHKLPVSEAAYDMAYATIPQYQAAEGWAVHGKSGSGWLRDNNGKINESRPQGWFVGWAEK 234

Query: 235 GDQSLI 240
             + ++
Sbjct: 235 NGRQVV 240


>gi|25140613|gb|AAN73274.1| extended-spectrum beta-lactamase KLUG-1 [Kluyvera georgiana]
          Length = 291

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 69/256 (26%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
            +    +++L    P  + A   +     L            +D  +    +     D  
Sbjct: 11  LMTTTCISLLLGSAPLYAQANDVQQKLAALEKSSGGRLGVALIDTADNAQTLY--RADER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L+  + I  +        +      TMTL      
Sbjct: 69  FAMCSTSKVMAAAAVLKQSETQKKVLSQKVEIKSSDLINYNPITEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +   L   +K   F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAHLGGPDKVTAFARAIGDNTFRLDRTEPTLNTAIPGDPRDTTTPLA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRNLTLGSALGETQRAQLVTWLKGNTTGAASIQAGLPTSWVVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  LI V 
Sbjct: 249 IAVIWPEGRAPLILVT 264


>gi|15805212|ref|NP_293900.1| D-alanyl-D-alanine carboxypeptidase [Deinococcus radiodurans R1]
 gi|6457845|gb|AAF09764.1|AE001880_1 D-alanyl-D-alanine carboxypeptidase, putative [Deinococcus
           radiodurans R1]
          Length = 474

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            + D NTG V+    PD P  PAS  KL+TA  V           +T +T+
Sbjct: 66  LVRDLNTGKVLVALDPDRPLVPASTMKLVTAAAVLYDRGGAGGWWSTELTV 116


>gi|8134349|sp|O69395|BLT2_ECOLX RecName: Full=Beta-lactamase Toho-2; Flags: Precursor
 gi|3142149|dbj|BAA28282.1| beta-lactamase [Escherichia coli]
          Length = 289

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 64/240 (26%), Gaps = 10/240 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 52  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 109

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             +      TMTL       +  S N     +   L               +   L  T 
Sbjct: 110 PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 169

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                 +      TT          ++           +  +  +         A     
Sbjct: 170 PTLNTAIPGDPRDTTTARAGADVASLRWVMRWAKPSGAVGDVAQRQYDRAAGIRAGLPTS 229

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
              G KTG       N +A      +  L+ V         A  R      +A +++ G 
Sbjct: 230 WTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 289


>gi|6979156|gb|AAF34337.1| beta-lactamase SHV-5 variant [Klebsiella pneumoniae]
          Length = 260

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 57/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGEFCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A     L   + +         Q+    +  +       +V    
Sbjct: 155 LNEALPGDARDTTTPASMAGTLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 215 WFIADKTG------------ASKRGARGIVALLGPNNKAER 243


>gi|312132166|ref|YP_003999506.1| beta-lactamase [Leadbetterella byssophila DSM 17132]
 gi|311908712|gb|ADQ19153.1| beta-lactamase [Leadbetterella byssophila DSM 17132]
          Length = 287

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 69/232 (29%), Gaps = 14/232 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L+D  TG +  +   D P+   S+ K   A      + + K  L   I+I          
Sbjct: 41  LIDLKTGEI-KQVNGDDPFPLQSVFKFHIAAKALEQVDKGKWQLRDQISIEPGEIYTDLY 99

Query: 93  NSTFKKG----STMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLG 146
           +    +     S+M LD+ +  ++  S N     +        T  ++++ +   +  + 
Sbjct: 100 SPIRDEIGTNLSSMRLDSLIYYMVSLSDNSACDILLRHLGGPSTVNEYIKEIGIKNTKIE 159

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
           ++     +          T       L      ++     +  +  L        N    
Sbjct: 160 VNELTMQSRWEEQYRNISTPLSVAETLKKFYLREYLSGDMHDFLWALMENSPTGANRIRK 219

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQ-------GDQSLIAVILGALDRNT 251
                     KTG +  +   I  +            ++ + V+  +  + +
Sbjct: 220 GLPEGAVLAHKTGTSGRNVDGISGATNDAGIIILPDGRAYVLVVFVSDSKES 271


>gi|399121|sp|P30897|BLAC_PROMI RecName: Full=Beta-lactamase; AltName: Full=Carbenicillinase;
           Flags: Precursor
 gi|216841|dbj|BAA02496.1| beta-lactamase precursor [Proteus mirabilis]
          Length = 298

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 80/292 (27%), Gaps = 19/292 (6%)

Query: 5   LVIIAMAMLSNIF-----PFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTK 58
            + + +++ +N          +              D  TG    E+  +  +  +S  K
Sbjct: 17  FLCLTLSLNANATDSVLEAVTNAETELGARIGLAAHDLETGKR-WEHKSNERFPLSSTFK 75

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST-MTLDNALKLLIVKSAN 117
            +    V   +   K  +   +  S++        +    G   M+L    +  +  S N
Sbjct: 76  TLACANVLQRVDLGKERIDRVVRFSESNLVTYSPVTEKHVGKKGMSLAELCQATLSTSDN 135

Query: 118 DIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             A  I +++   +   KF++ + + +  L         A    +    T    +  L  
Sbjct: 136 SAANFILQAIGGPKALTKFLRSIGDDTTRLDRWEPELNEAVPGDKRDTTTPIAMVTTLEK 195

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +  +        Q++      +                  +TG        I A     
Sbjct: 196 LLIDETLSIKSRQQLESWLKGNEVGDALFRKGVPSDWIVADRTGAGGYGSRAITAVMWPP 255

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           ++  I   L   + +   +           N    K    I K    +N  N
Sbjct: 256 NRKPIVAALYITETDASFEE---------RNAVIAKIGEQIAKTVLMENSRN 298


>gi|254521343|ref|ZP_05133398.1| beta-lactamase [Stenotrophomonas sp. SKA14]
 gi|219718934|gb|EED37459.1| beta-lactamase [Stenotrophomonas sp. SKA14]
          Length = 304

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 58/203 (28%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LDT +G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 62  VLDTGSGRSIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEQDLLSYAP 121

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  + +          F++   ++      +  
Sbjct: 122 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLDVVGGPSALTAFLRGQGDSVTRNDRNEP 181

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 182 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGK 241

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 242 RWRVGDKTGSNGDDTRNDIAVLW 264


>gi|159028242|emb|CAO88052.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 393

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 77/278 (27%), Gaps = 14/278 (5%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++   +          +      +D + G   A    D  +  AS  K+      F  + 
Sbjct: 110 SLNQKLQALTVKYPKLQA-GALFIDLDNGA-YANFRGDTIFAAASTIKIPILVAFFEDVD 167

Query: 71  EKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             K  L   +  +K+                T T       + V S N     +      
Sbjct: 168 AGKIRLDETLVATKDVLASGSGDMQYLGLNKTYTALETATKMNVISDNTATNMLI----- 222

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
                 + +N   +  GL++T   N    ++  + T+ RD+  +  ++       +    
Sbjct: 223 KRMGGKKALNQRFQAWGLTSTVINNPLPDLEGTNTTSPRDLVTILGKVNQGELLSLRSRD 282

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                ++  +                 KTG   +   +     +   +  +  ++  + R
Sbjct: 283 RLLNIMQETRTRTLLPQGIEKSADIAHKTGDIGSMLADAGIIDMPNGKRYLGAVM--VKR 340

Query: 250 NTRNKVSASLLSM----GFYNKTDRKKINYIIKDFYQQ 283
              +  + +L+       + +    +    +      Q
Sbjct: 341 PHNDSNARTLIQQISRTAYQHFKWYQTQPAVKPQPVAQ 378


>gi|326378235|gb|ADZ57219.1| extended-spectrum beta-lactamase TEM-63 [Vibrio cholerae O1 biovar
           El Tor]
          Length = 256

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 2/123 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 27  GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVK 86

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
               +       MT+       I  S N  A  +  ++   ++   F+ +M +    L  
Sbjct: 87  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDS 146

Query: 148 SAT 150
              
Sbjct: 147 WEP 149


>gi|238898184|ref|YP_002923865.1| beta-lactamase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465943|gb|ACQ67717.1| beta-lactamase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 286

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 68/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLP-YYTLLDTNTGHVIAENYPDH 49
           M  F + +     +   P L+   T                Y  LD   G ++    P+ 
Sbjct: 1   MESFRLTLISIFAAFSLPALAHQATIDKVKESERQLNARVGYVELDLANGQILNTYRPEE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V S +      L   I   ++        +       MT+     
Sbjct: 61  RFPMMSTFKVLLCGAVLSRVDAGLEQLDRRIKYRQSDLVKYSPMTKQHLADGMTVAELCS 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +       K    F+Q   +    L    T    A    +    T  
Sbjct: 121 AAITVSDNTAANLLLSTIGGPKGLTSFLQKTGDQVTRLDRWETELNQALPGDERDTTTPK 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   +           Q++   +  K       +V         KTG        
Sbjct: 181 IMAQTLHNLLTGKILSVKSRQQLQTWMVMNKVGGPLLRSVLPANWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A       I   LGA  + +R
Sbjct: 233 ----AGNHGSRGIIAALGADGKPSR 253


>gi|125634074|gb|ABN48311.1| beta-lactamase CTX-M-56 [Escherichia coli]
          Length = 291

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAENRRDILAAAAKIVTHGF 291


>gi|322368439|ref|ZP_08043008.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Haladaptatus paucihalophilus DX253]
 gi|320552455|gb|EFW94100.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Haladaptatus paucihalophilus DX253]
          Length = 426

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 11/67 (16%)

Query: 13 LSNIFPFLSIAETNKLPYYTLLDTNT-----------GHVIAENYPDHPWNPASLTKLMT 61
          + +     +       P+  +LD+++           G V+A   PD P  PAS TKL+T
Sbjct: 1  MVSGMDADASTPDADAPHTDILDSDSFVTSVLARERGGSVLASRNPDVPLPPASNTKLLT 60

Query: 62 AYVVFSF 68
          A +    
Sbjct: 61 AALSLHH 67


>gi|309779211|ref|ZP_07673974.1| class D beta-lactamase Oxa [Ralstonia sp. 5_7_47FAA]
 gi|308922015|gb|EFP67649.1| class D beta-lactamase Oxa [Ralstonia sp. 5_7_47FAA]
          Length = 275

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 55/211 (26%), Gaps = 2/211 (0%)

Query: 32  TLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  TG  V+ E   D    PAS  KL  A + F     K            +     
Sbjct: 29  IVADAATGKAVLHEGKCDERVTPASTFKLALAVMGFDHGFLKDEHTPVEHFKRGDPDWGG 88

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +       +     + +      +    A      + K     +    +  KN G+  +
Sbjct: 89  DAWHQPIDPALWLKYSVVWYSQRVTHAMGAQTFQAYVRKLGYGNMDVSGDPGKNNGMDRS 148

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              ++  +         R +      +     + +           G          G  
Sbjct: 149 WITSSLKISPEEQVGLMRRIVNRQLSVSARTYEMVDRTVQTWQVPGGWAVQGKTGTAGPA 208

Query: 211 LGADGMKTGFTCASGFN-IVASAIQGDQSLI 240
            G       +  A  +   V  A +GD++ +
Sbjct: 209 PGNTSPDGTWDQAHAYGWFVGWARKGDKTYV 239


>gi|119509166|ref|ZP_01628317.1| Penicillin-binding protein, transpeptidase [Nodularia spumigena
           CCY9414]
 gi|119466332|gb|EAW47218.1| Penicillin-binding protein, transpeptidase [Nodularia spumigena
           CCY9414]
          Length = 501

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 78/226 (34%), Gaps = 7/226 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           L+IA  N  P   L+D  TG    +      ++ AS  K+      F  +   K  L   
Sbjct: 217 LAIASPNLRPGVFLVDLETGG-YVDVNSSATFSAASTIKVPILIAFFQDVDAGKVRLDEM 275

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + + K        N  +++  T      L   +  S+++ A  +  +     +     +N
Sbjct: 276 LRMEKEMVAGGSGNLQYQQVGTQYSALELATQMSASSDNTATNMLIARLGGMEA----LN 331

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
                 GLSAT   N    +   + ++ RD+  L   +       M    +  L+I  + 
Sbjct: 332 QRFLRWGLSATAIRNPLPDLPGTNTSSPRDLGNLLAMVNQGNLVSMRSRDL-ILDIMRRT 390

Query: 200 YPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
             N     G   GA    KTG       ++    I   +  IA ++
Sbjct: 391 ERNHLLPSGLGAGARVYHKTGDIATMLGDVGLIDIPTGKRYIAAVM 436


>gi|325106533|ref|YP_004276187.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Pedobacter saltans DSM 12145]
 gi|324975381|gb|ADY54365.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Pedobacter saltans DSM 12145]
          Length = 458

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 15/81 (18%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY---------------TLLDTNTGHVIAEN 45
          M++   I+ ++ + N     SI +  K  Y                 + D NT  VI   
Sbjct: 1  MKKIFAILLISAIGNSSFSQSITDKLKTAYAAFSKDAQLKYATSSLIVTDRNTNKVIFAQ 60

Query: 46 YPDHPWNPASLTKLMTAYVVF 66
            +    PAS  K +T+    
Sbjct: 61 NENVGLAPASTLKTVTSATAL 81


>gi|5305924|gb|AAD41880.1|AF153050_1 putative carboxypeptidase [Enterococcus faecium]
          Length = 111

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-----WAVGTFLGAD 214
               Y  A                  +    K    +   Y N+N      +        
Sbjct: 1   DTTAYDLAIIAKACLENPIISEIVASNTSYEKWPNGREVTYNNSNELLDPNSPYYRPEVI 60

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
           G+KTG +   G  +V++A+   ++ I V +G+  + +R + S  +L 
Sbjct: 61  GLKTGTSSLGGACVVSAAVIDGETYICVAMGS-TKESRFQDSVDILD 106


>gi|75763779|ref|ZP_00743442.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488736|gb|EAO52289.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 115

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 30/61 (49%)

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGF 264
                F G DG++T F+    ++ V++A   D  LI+VIL A + N     +  LL  GF
Sbjct: 1   MKTLNFKGVDGLQTSFSTNGNYSFVSTAKLEDTRLISVILDADEENISFIETKKLLQYGF 60

Query: 265 Y 265
            
Sbjct: 61  D 61


>gi|160948437|emb|CAJ47128.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 285

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 69/264 (26%), Gaps = 24/264 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHP 50
           MR  L II++     +    S     ++               +D  +G  +     D  
Sbjct: 1   MRIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADER 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K++    V + +      L   I   +         S       MT+      
Sbjct: 61  FPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAA 120

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            I  S N  A  +            F++ + +    L    T    A         T A 
Sbjct: 121 AITMSDNSAANLLLATVGGPVGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPAS 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             A L   + +         Q+    +  +       +V         +TG         
Sbjct: 181 MAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADRTG--------- 231

Query: 229 VASAIQGDQSLIAVILGALDRNTR 252
              A +     I  +LG  ++  R
Sbjct: 232 ---AGERGARGIVALLGPNNKAER 252


>gi|85062589|gb|ABC69156.1| CTX-M type extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 72/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAMQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|291586289|gb|ADE18897.1| TEM-1 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Heidelberg]
          Length = 138

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 11/131 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K++    V S +   +  L   I  S+N        +       MT+       I
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAI 125

Query: 113 VKSANDIAVAI 123
             S N  A  +
Sbjct: 126 TMSDNTAANLL 136


>gi|269795424|ref|YP_003314879.1| penicillin-binding protein [Sanguibacter keddieii DSM 10542]
 gi|269097609|gb|ACZ22045.1| penicillin-binding protein, beta-lactamase class C [Sanguibacter
          keddieii DSM 10542]
          Length = 271

 Score = 48.8 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 24 ETNKLPYYTLLDTNTGHVIAEN-YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              +    +   ++G V+A +   D  +  AS++KL+TAY     ++E    L  P
Sbjct: 11 PVENVGTAVV--ASSGEVLASHGDLDRVFPLASVSKLLTAYAALVAVEEGAVGLDDP 65


>gi|114705368|ref|ZP_01438276.1| Beta-lactamase class A [Fulvimarina pelagi HTCC2506]
 gi|114540153|gb|EAU43273.1| Beta-lactamase class A [Fulvimarina pelagi HTCC2506]
          Length = 290

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 12/145 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPWNPA 54
           + ++A++         + A                   +LDT TG    E+  D  +  A
Sbjct: 12  IALVALSTGIACVQVGARAPDEVAAKLEDRLETRVGVFVLDTGTGET-WEHRADERFPMA 70

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K      +     +    L   + +  +        +  + GS ++L  A +  +  
Sbjct: 71  STFKSFACSALLDKAAKGSLALDDTVAVEVSDLVTYSPVTEKRVGSRLSLREACEATLRT 130

Query: 115 SANDIAVAIAESLCKTEKKFVQHMN 139
           S N  A  + E+L    +     M 
Sbjct: 131 SDNTAANIVLEAL-GGPQAVTDFMR 154


>gi|160948459|emb|CAJ47137.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYVRLCIISLLATLPLAVHTSPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|254385669|ref|ZP_05000992.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. Mg1]
 gi|194344537|gb|EDX25503.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces sp. Mg1]
          Length = 476

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           A+   + P  +      L   +++DT TG V+ E  P  P  PAS  K+
Sbjct: 90  ALAGALRPLFADPALGSLRSASVIDTATGRVLYEAKPREPMTPASTVKI 138


>gi|73665394|gb|AAZ79404.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSDRSQQQLLQWMLDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIAKI 276


>gi|282192946|gb|ADA81876.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|323709077|gb|ADY02555.1| beta-lactamase CTX-M-104 [Escherichia coli]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A +R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAENRRDVLASAARIIAEGL 291


>gi|270156653|ref|ZP_06185310.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Legionella longbeachae D-4968]
 gi|289164898|ref|YP_003455036.1| D-Ala-D-Ala carboxypeptidase [Legionella longbeachae NSW150]
 gi|269988678|gb|EEZ94932.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Legionella longbeachae D-4968]
 gi|288858071|emb|CBJ11931.1| putative D-Ala-D-Ala carboxypeptidase [Legionella longbeachae
          NSW150]
          Length = 469

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 5  LVIIAMAMLSNIFPFLSIAETN----------KLPYYTLLDTNTGHVIAENYPDHPWNPA 54
          L  +A  + +      ++AE                  + D  TG VI     D   +PA
Sbjct: 7  LCFLAAILFNQAANSQTLAEKIDEIIKQQLPHATIGVFVKDAQTGKVIYRRNADKLLSPA 66

Query: 55 SLTKLMTAYVVFSFLKE 71
          S  KL TA      LK 
Sbjct: 67 SSMKLFTAAAALYQLKP 83


>gi|226432219|gb|ACO55655.1| TER-1 beta-lactamase [Raoultella terrigena]
          Length = 284

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 67/232 (28%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A   PD  +   S  K+     V + +   +  L   +   +         
Sbjct: 45  LDLASGRLLASYRPDERFPMMSTFKVPLCAAVLARVDAGEEKLDRRVRYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +       MT+       I  S N  A  +  +    +    F++   + +  L    T 
Sbjct: 105 TEKHLADGMTVAELCAAAITLSDNTAANLLLASVGGTQGLTAFLRRSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   +  K       +     
Sbjct: 165 LNEALPGDARDTTTPQAMAKTLHNLLTGSVLSAASRQQLRSWMVDDKVAGPLLRSTLPHG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
                KTG        I+A+     Q   ++ + L G     + RN+  A +
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGQPARIVIIYLTGTEASMDERNRQIAEI 276


>gi|56463229|gb|AAV91756.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDQQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 200 WFIADKTG------------ASKRGARGIVALLGPNNKAER 228


>gi|56463227|gb|AAV91755.1| beta-lactamase SHV [Escherichia coli]
 gi|56463231|gb|AAV91757.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDQQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 200 WFIADKTG------------ASKRGARGIVALLGPNNKAER 228


>gi|82655080|emb|CAJ19608.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 71/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LIPLIAALPLAVFASPPPLEQITLSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSDRSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVMIYLRDTPATMAERNQQIAKI 276


>gi|213421722|ref|ZP_03354788.1| D-alanyl-D-alanine endopeptidase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 151

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 1/90 (1%)

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASA 232
            + +                      + NTN  V          KTGFT A+G  +V   
Sbjct: 23  QYPLIGQLSTTREDMATFSHPAYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRT 82

Query: 233 IQGDQSLIAVILGALDRNTRNKVSASLLSM 262
           +  ++ +  V++ A  + T    ++ L + 
Sbjct: 83  VINNKPVALVVMDAFGKYTHFADASRLRTW 112


>gi|298369493|ref|ZP_06980810.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282050|gb|EFI23538.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria sp. oral taxon 014 str. F0314]
          Length = 470

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             + D  +G +I E+  D   NPAS  KL+TA+  F  
Sbjct: 32 SVYVKDLQSGRIIEEHRADESMNPASTMKLVTAFAAFRA 70


>gi|157838542|gb|ABV82950.1| extended spectrum beta-lactamase SHV-7 [Escherichia coli]
          Length = 265

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 26  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 85

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 86  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 145

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 146 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 205

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 206 WFIADKTG------------ASKRGARGIVALLGPNNKAER 234


>gi|157838540|gb|ABV82949.1| extended spectrum beta-lactamase SHV-12 [Enterobacter cloacae]
          Length = 269

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 28  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 87

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 88  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 147

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 148 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 207

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 208 WFIADKTG------------ASKRGARGIVALLGPNNKAER 236


>gi|94502880|gb|ABF29671.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 258

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 93  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 213 WFIADKTG------------ASKRGARGIVALLGPNNKAER 241


>gi|90403951|gb|ABD93869.1| SHV-12 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 277

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 215 WFIADKTG------------ASKRGARGIVALLGPNNKAER 243


>gi|90403945|gb|ABD93866.1| SHV-12 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 276

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 36  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 96  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 155

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 156 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 215

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 216 WFIADKTG------------ASKRGARGIVALLGPNNKAER 244


>gi|56463225|gb|AAV91754.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 200 WFIADKTG------------ASKRGARGIVALLGPNNKAER 228


>gi|56463221|gb|AAV91752.1| beta-lactamase SHV [Escherichia coli]
 gi|56463241|gb|AAV91762.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 200 WFIADKTG------------ASKRGARGIVALLGPNNKAER 228


>gi|56463223|gb|AAV91753.1| beta-lactamase SHV [Escherichia coli]
 gi|56463233|gb|AAV91758.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 200 WFIADKTG------------ASKRGARGIVALLGPNNKAER 228


>gi|31096351|gb|AAP43508.1| CTX-M-30 beta-lactamase [Citrobacter freundii]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 73/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++   A+ +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATAAVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|127512890|ref|YP_001094087.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella loihica PV-4]
 gi|126638185|gb|ABO23828.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella loihica PV-4]
          Length = 543

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 18/49 (36%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              IA  +        D +   ++ ++  D    PAS  KL+TA     
Sbjct: 79  LSVIAPPHSQLSIFAQDLSNNEILYQHNADTLVLPASTQKLLTAVAAMR 127


>gi|317471251|ref|ZP_07930615.1| penicillin-binding protein [Anaerostipes sp. 3_2_56FAA]
 gi|316901259|gb|EFV23209.1| penicillin-binding protein [Anaerostipes sp. 3_2_56FAA]
          Length = 147

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 44/116 (37%), Gaps = 8/116 (6%)

Query: 229 VASAIQGDQSLIAVILGA---LDRNTRNKVSASLLSMGFYNKTDRKKI---NYIIKDFYQ 282
           + +  +   ++IAV+L       +  +     +L+  G  N +  K I   + +   +  
Sbjct: 1   MGAVKKNGMTMIAVVLACGWPPHKTYKWSDVRTLVDYGAKNYSYHKIIPDYSKLTDLYVN 60

Query: 283 QNLSNEVPNISE--EVCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNKITKK 336
             + ++V   ++   +    K+    + + +  K   +     E++  ++  +  +
Sbjct: 61  GGMEHKVSIGAKGGGMTLLLKKGEKVDIKCQIPKSLNAPVKKKEQVGKIEYVLNGR 116


>gi|134096833|ref|YP_001102494.1| putative alanine rich lipoprotein LppW [Saccharopolyspora
          erythraea NRRL 2338]
 gi|291005122|ref|ZP_06563095.1| putative alanine rich lipoprotein LppW [Saccharopolyspora
          erythraea NRRL 2338]
 gi|133909456|emb|CAL99568.1| putative conserved alanine rich lipoprotein LppW
          [Saccharopolyspora erythraea NRRL 2338]
          Length = 236

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)

Query: 28 LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTTP 79
             Y ++D  +G V++E  P   +  AS+ K++ A   +              
Sbjct: 5  SAGYLVVDAASGRVLSERDPRRRFRSASIVKILIALDHLLELGPGGDIPDDDR 57


>gi|11321258|gb|AAG34108.1| cefotaxime-hydrolyzing beta-lactamase [Klebsiella pneumoniae]
 gi|31096326|gb|AAP43783.1| beta-lactamase CTX-M-12 [Klebsiella pneumoniae]
 gi|47087856|gb|AAT10373.1| extended spectrum beta-lactamase CTX-M12 [Pantoea agglomerans]
 gi|110084283|gb|ABG49386.1| extended-spectrum beta-lactamase CTX-M-12 [Escherichia coli]
 gi|110084286|gb|ABG49388.1| extended-spectrum beta-lactamase CTX-M-12 [Escherichia coli]
 gi|110084289|gb|ABG49390.1| extended-spectrum beta-lactamase CTX-M-12 [Escherichia coli]
 gi|110811595|gb|ABG91579.1| extended-spectrum beta-lactamase CTX-M-12 [Klebsiella pneumoniae]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 74/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++   A+ +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATAAVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + + ++L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPSLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|94502905|gb|ABF29685.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 282

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 7   IISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 67  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 126

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 127 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 186

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 187 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------AGE 234

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 235 RGARGIVALLGPNNKAER 252


>gi|94502828|gb|ABF29643.1| beta-lactamase [Escherichia coli]
 gi|94502873|gb|ABF29667.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 272

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 67/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 6   IISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 65

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 66  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 125

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 126 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 185

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 186 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------AGE 233

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 234 RGARGIVALLGPNNKAER 251


>gi|8101044|gb|AAF72531.1|AF252623_1 beta-lactamase CTX-M-13 [Klebsiella pneumoniae]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LDT-NTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +DT +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTKDNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|189009194|ref|YP_001928076.1| OXA-9 [Klebsiella pneumoniae]
 gi|189009197|ref|YP_001928079.1| OXA-9 [Klebsiella pneumoniae]
 gi|209901186|ref|YP_002286967.1| beta-lactamase [Klebsiella pneumoniae]
 gi|332668530|ref|YP_004455306.1| oxacillinase-carbenicillinase [Enterobacter sp. W001]
 gi|4539651|gb|AAD22145.1|AF034958_4 oxacillinase [Enterobacter aerogenes]
 gi|76786451|gb|ABA54978.1| OXA-9 [Pseudomonas putida]
 gi|171850735|gb|ACB55474.1| OXA-9 [Klebsiella pneumoniae]
 gi|171850738|gb|ACB55477.1| OXA-9 [Klebsiella pneumoniae]
 gi|209574137|gb|ACI63025.1| beta-lactamase [Klebsiella pneumoniae]
 gi|324009187|gb|EGB78406.1| putative class D beta-lactamase Oxa [Escherichia coli MS 57-2]
 gi|332015346|gb|AED99558.1| oxacillinase-carbenicillinase [Enterobacter sp. W001]
          Length = 279

 Score = 48.4 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 69/246 (28%), Gaps = 12/246 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYP-DHPWNPASLT 57
           M++ L++  +  +S   P  S+A      L    + D  TG+ + E        +P S  
Sbjct: 6   MKKILLLHMLVFVSATLPISSVASDEVETLKCTIIADAITGNTLYETGECARRVSPCSSF 65

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A + F     +     T     +               +    D+ +      ++ 
Sbjct: 66  KLPLAIMGFDSGILQSPKSPTWELKPEYNPSPRDRTYKQVYPALWQSDSVVWFSQQLTSR 125

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                  E + K E        ++ K+ GL          ++     +    +  L   +
Sbjct: 126 LGVDRFTEYVKKFEYGNQDVSGDSGKHNGL------TQSWLMSSLTISPKEQIQFLLRFV 179

Query: 178 KTDFPQYMHYFQIKGLEIKGKK-YPNTNWAVGTFLGADGMKTGFTCASGFN--IVASAIQ 234
               P     + +    I   +          +  G      G    S      V  A +
Sbjct: 180 AHKLPVSEAAYDMAYATIPQYQAAEGWAVHGKSGSGWLRDNNGKINESRPQGWFVGWAEK 239

Query: 235 GDQSLI 240
             + ++
Sbjct: 240 NGRQVV 245


>gi|329897122|ref|ZP_08271866.1| Beta-lactamase [gamma proteobacterium IMCC3088]
 gi|328921414|gb|EGG28804.1| Beta-lactamase [gamma proteobacterium IMCC3088]
          Length = 332

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 23/161 (14%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN-----KLPYYTLL----------------DTNTGH 40
           R +L+ +A+ ++       S  +              L                D  TG 
Sbjct: 6   RFWLISLALVVMLASAKGNSQPQQVGSAVAPAKVALALHTVTSGLVGVAGVAAQDMTTGA 65

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
            I     D P+  AS  K+  A  + + +   +  LT  + I  +   Y    +      
Sbjct: 66  QIF-LNGDEPFPMASTYKIAIAMTLLAKVDHGELNLTDMVDIDDSEWVYSQVIAANFIHQ 124

Query: 101 TMTLDNAL-KLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            ++L  A    +++  +++ A  I   L        Q++  
Sbjct: 125 GVSLSIANLLEVMITQSDNTATDICLRLAGGPSAVNQYLGQ 165


>gi|295135625|ref|YP_003586301.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine
          endopeptidase [Zunongwangia profunda SM-A87]
 gi|294983640|gb|ADF54105.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine
          endopeptidase [Zunongwangia profunda SM-A87]
          Length = 436

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 28/79 (35%), Gaps = 12/79 (15%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK-----LPYY-------TLLDTNTGHVIAENYPD 48
          ++  L+ + +++       L   +         P +        + D  +  ++ +   +
Sbjct: 3  IKIKLIFLLLSISCLSCASLKNTKNINQIFDHSPAFKQGFTGLVIYDPGSNKILFDKNGN 62

Query: 49 HPWNPASLTKLMTAYVVFS 67
            + PAS TKL T Y    
Sbjct: 63 KYFTPASNTKLFTFYTALK 81


>gi|1174372|emb|CAA54738.1| beta-lactamase [Citrobacter koseri]
          Length = 294

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 63/238 (26%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K M A  V    + +  +L   + I K         + 
Sbjct: 59  ADRSQILY--RGDERFAMCSTSKTMVAAAVLKQSETQHDILQQKMVIKKADLTNWNPVTE 116

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFM 153
                 MTL       +  S N     + E          F + + +T+  L        
Sbjct: 117 KYVDKEMTLAELSAATLQYSDNTAMNKLLEHLGGTSNVTAFARSIGDTTFRLDRKEPELN 176

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    +       L      D        Q+            +  A       
Sbjct: 177 TAIPGDERDTTSPLAMAKSLHKLTLGDALAGAQRAQLVEWLKGNTTGGQSIRAGLPEGWV 236

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D+  LI V         A  R      +A +++ G 
Sbjct: 237 VGDKTGAGDYGTTNDIAVIWPEDRAPLILVTYFTQPQQDAKGRKDILAAAAKIVTEGL 294


>gi|308233850|ref|ZP_07664587.1| beta-lactamase [Atopobium vaginae DSM 15829]
 gi|328943558|ref|ZP_08241023.1| hypothetical protein HMPREF0091_10248 [Atopobium vaginae DSM 15829]
 gi|327491527|gb|EGF23301.1| hypothetical protein HMPREF0091_10248 [Atopobium vaginae DSM 15829]
          Length = 382

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 15/248 (6%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    ++D + G+       D  +  AS+ KL         +   +      +T+ 
Sbjct: 143 PYGSSVSVCIIDASNGN-YCHVNSDKAFVSASMIKLAVLCEYMHAVDNGQLDPADRVTLK 201

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                        ++ ++ + D   + +I+ S N     +   L          +N   +
Sbjct: 202 NMKVVGGTGLIQTERHASYSYDELCRYMIMYSDNTATNVLINKL------GQDAINERVQ 255

Query: 144 NLGLSATHFMNAHGV--VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            LG   T              ++ +ARD A + ++   +          K LE   K+  
Sbjct: 256 ALGCKNTSLNRQLMALNTNTENWISARDAATILYKF-KNGTAASSTICAKALEYLSKQTD 314

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL---GALDRNTRNKVSAS 258
           N   A G   GA   KTG   +   +       G    + V L   GA + N   K  A 
Sbjct: 315 NEGMAEGISSGAFAHKTGSLRSMRHDGGIVL--GKHPYVIVALCDIGAGNANRLMKEIAQ 372

Query: 259 LLSMGFYN 266
                F  
Sbjct: 373 KTDAYFSQ 380


>gi|62738242|pdb|1WE4|A Chain A, Crystal Structure Of Class A Beta-Lactamase Toho-1 G238c
           Mutant
          Length = 262

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 85  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 145 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 204

Query: 214 DGMKTG-FTCASGFNIVASAIQGDQSLIAVILGA--LDRNTRNKV----SASLLSMGF 264
            G KTG     +  +I     +    L+ V        +  R +     +A +++ GF
Sbjct: 205 VGDKTGSCDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAERRRDILAAAAKIVTHGF 262


>gi|76799308|ref|ZP_00781473.1| DD-carboxypeptidase [Streptococcus agalactiae 18RS21]
 gi|76585335|gb|EAO61928.1| DD-carboxypeptidase [Streptococcus agalactiae 18RS21]
          Length = 199

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 15/136 (11%)

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF--------- 210
              + TTARD++IL++     +P  ++Y +   ++          +    +         
Sbjct: 1   NATNVTTARDLSILTYHFLKKYPDILNYTKYPEVKAMVGTPYEETFTTYNYSTPGAKFGL 60

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------RNKVSASLLSMGF 264
            G DG+KTG + ++ FN + +A + +  LI V+LG  D +       R+    +L+  GF
Sbjct: 61  EGVDGLKTGSSPSAAFNALVTAKRQNTRLITVVLGVGDWSDQDGEYYRHPFVNALVEKGF 120

Query: 265 YNKTDRKKINYIIKDF 280
            +  +      ++K  
Sbjct: 121 KDAKNISSKTPVLKAV 136


>gi|288872164|dbj|BAI70508.1| beta-lactamase [Escherichia coli]
          Length = 288

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 69/256 (26%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
            +    +++L    P  + A   +     L            +D  +    +     D  
Sbjct: 11  LMTTACISLLLGSAPLYAQANDVQQKLAALEKSSGGRLGVALIDTADNAQTLY--RADER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L+  + I  +        +      TMTL      
Sbjct: 69  FAMCSTSKVMAAAAVLKQSETQKKVLSQKVEIKSSDLINYNPITEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +   L   +K   F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAHLGGPDKVTAFARAIGDNTFRLDRTEPTLNTAIPGDPRDTTTPLA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRNLTLGSALGETQRAQLVTWLKGNTTGAASIQAGLPTSWVVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  LI V 
Sbjct: 249 IAVIWPEGRAPLILVT 264


>gi|9739248|gb|AAF93177.1| cefotaxime-hydrolyzing beta-lactamase [Klebsiella pneumoniae]
          Length = 282

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAGLERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+  
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSPA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|82655068|emb|CAJ19602.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 71/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQITLSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDERLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSDRSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIARI 276


>gi|288558435|dbj|BAI68282.1| CTX-M 14 extended spectrum beta lactamase [Klebsiella pneumoniae
           subsp. pneumoniae]
          Length = 277

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 4   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 61

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 62  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 121

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 122 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 182 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 241

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 242 IAVIWPQGRAPLVLVT 257


>gi|238864042|gb|ACR66297.1| beta-lactamase CTX-M14 [Escherichia coli]
 gi|238864044|gb|ACR66298.1| beta-lactamase CTX-M14 [Escherichia coli]
 gi|238864046|gb|ACR66299.1| beta-lactamase CTX-M14 [Escherichia coli]
 gi|238864048|gb|ACR66300.1| beta-lactamase CTX-M14b [Escherichia coli]
 gi|238864050|gb|ACR66301.1| beta-lactamase CTX-M14b [Escherichia coli]
          Length = 276

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 4   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 61

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 62  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 121

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 122 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 182 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 241

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 242 IAVIWPQGRAPLVLVT 257


>gi|66932801|gb|AAY58238.1| extended-spectrum beta-lactamase CTX-M-14 [Escherichia coli]
          Length = 283

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|66932803|gb|AAY58239.1| extended-spectrum beta-lactamase CTX-M-24 [Escherichia coli]
          Length = 283

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|58119477|gb|AAW65395.1| extended-spectrum beta-lactamase CTX-M-14 [Proteus mirabilis]
          Length = 279

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|18656798|gb|AAL77984.1| extended-spectrum beta-lactamase CTX-M-14 [Serratia liquefaciens]
          Length = 264

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 6   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 63

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 64  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 123

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 124 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 183

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 184 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 243

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 244 IAVIWPQGRAPLVLVT 259


>gi|215528084|ref|YP_002332867.1| beta-lactamase CTX-M-24 [Klebsiella pneumoniae]
 gi|283826843|ref|YP_003377714.1| extended-spectrum beta-lactamase CTX-M-24 [Shigella sonnei]
 gi|23953863|gb|AAN38836.1| beta-lactamase CTX-M-24 [Klebsiella pneumoniae]
 gi|68673193|emb|CAJ00132.1| CTX-M-24 beta-lactamase [Escherichia coli]
 gi|85062591|gb|ABC69157.1| CTX-M type extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|125634072|gb|ABN48310.1| beta-lactamase CTX-M-24 [Escherichia coli]
 gi|147712678|gb|ABQ45876.1| extended-spectrum beta-lactamase CTX-M-24 [Proteus mirabilis]
 gi|165928604|gb|ABY74372.1| beta-lactamase CTX-M-24 [Klebsiella pneumoniae]
 gi|197215895|gb|ACH53184.1| CTX-M-24 beta-lactamase [Escherichia coli]
 gi|214011885|gb|ACJ61681.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
 gi|221149284|gb|ACM04465.1| CTX-M-24 extended-spectrum beta-lactamase [Escherichia coli]
 gi|221149287|gb|ACM04466.1| CTX-M-24 extended-spectrum beta-lactamase [Escherichia coli]
 gi|259017812|gb|ACV89492.1| CTX-M-24 extended-spectrum beta-lactamase [Escherichia coli]
 gi|259017814|gb|ACV89493.1| CTX-M-24 extended-spectrum beta-lactamase [Escherichia coli]
 gi|282192950|gb|ADA81878.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|282192952|gb|ADA81879.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|283466735|emb|CBI12393.1| extended-spectrum beta-lactamase CTX-M-24 [Shigella sonnei]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|197724695|emb|CAP12349.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 65/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----------KLPYYTL-LDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +                  + +D  +G  +A    D 
Sbjct: 1   MRYVRLCVISLLATLPLAVDAGPQPLEQIKQSESQLSGRVGMVEMDLASGRTLAAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMVSTFKVLLCGAVLARVDAGVEQLVRRIHYRQQDLVDYSPVSEKHLVDGMTIGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITLSDNSAGNLLLATVGGPAGLTAFLRQIGDNVTRLDRWETALNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   +           Q+    +  +       AV         KTG        
Sbjct: 181 SMAATLRKLLTAQHLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG   +  R
Sbjct: 233 ----AGERGARGIVALLGPDGKPER 253


>gi|47109376|emb|CAG28417.1| CTX-M-12a enzyme [Klebsiella pneumoniae]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 74/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++   A+ +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATAAVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + + ++L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPSLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|284929762|ref|YP_003422284.1| beta-lactamase class A [cyanobacterium UCYN-A]
 gi|284810206|gb|ADB95903.1| beta-lactamase class A [cyanobacterium UCYN-A]
          Length = 340

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 8/244 (3%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           ++F     + +   +    +     +   + L D ++               AS  K+  
Sbjct: 76  KKFAARELINLKKQLESINTKYPNVEPKAWFL-DLDSNT-YVNFNGTKSIAAASTIKIPI 133

Query: 62  AYVVFSFLKEKKAMLTTPITISKNASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
               F  +      L   IT+ K        +    + G   T     + +I+ S N   
Sbjct: 134 LVAFFEKVDAGDISLDQMITMDKEIIVGGSGNMQYMETGKQFTALEIARKMIIISDNTAT 193

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
             +   +          +N   K  G+  T   N+   +   + T+  D+A L  +I+  
Sbjct: 194 ELLIRQIGGKL-----FLNERFKKWGMRQTVINNSLPDLDGTNRTSPEDLAKLLLKIEKG 248

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
               +         ++  K             +   KTG       +     +   +  I
Sbjct: 249 NLISLRSRDRFLNIMRETKTKTLLPKGLERNASIAHKTGDIGTIIADAGIIDMPTGRRYI 308

Query: 241 AVIL 244
             I 
Sbjct: 309 GAIF 312


>gi|268634791|gb|ACZ16614.1| beta lactamase blaCTX-M-9 [Escherichia coli]
          Length = 272

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|238864052|gb|ACR66302.1| beta-lactamase CTX-M9 [Escherichia coli]
 gi|238864054|gb|ACR66303.1| beta-lactamase CTX-M9 [Escherichia coli]
 gi|238864056|gb|ACR66304.1| beta-lactamase CTX-M9 [Proteus vulgaris]
          Length = 276

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 4   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 61

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 62  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 121

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 122 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 182 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGDYGTTND 241

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 242 IAVIWPQGRAPLVLVT 257


>gi|129772167|gb|ABO31382.1| CTX-M-type extended spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|129772206|gb|ABO31383.1| extended-spectrum beta-lactamase CTX-M-type [Klebsiella pneumoniae]
 gi|129772238|gb|ABO31384.1| extended-spectrum beta-lactamase CTX-M-type [Klebsiella pneumoniae]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|19550880|gb|AAL91566.1|AF484965_1 extended-spectrum beta-lactamase CTX-M-9 [Escherichia coli]
          Length = 264

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 6   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 63

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 64  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 123

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 124 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 183

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 184 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGDYGTTND 243

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 244 IAVIWPQGRAPLVLVT 259


>gi|152964496|ref|YP_001360280.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Kineococcus radiotolerans SRS30216]
 gi|151359013|gb|ABS02016.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Kineococcus radiotolerans SRS30216]
          Length = 478

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            A+   + P L+          +++D  TG  +     D P  PAS+ KL+TA    
Sbjct: 76  AALGGVVAPLLADPALGASVSTSVVDALTGETLLATAADVPRTPASVAKLLTAVAAL 132


>gi|220906580|ref|YP_002481891.1| beta-lactamase [Cyanothece sp. PCC 7425]
 gi|219863191|gb|ACL43530.1| putative beta-lactamase [Cyanothece sp. PCC 7425]
          Length = 423

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 77/256 (30%), Gaps = 19/256 (7%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++         + L + +TG   A+      +  AS  K       F  +   K  L   
Sbjct: 143 IAARPGLTAGAFFL-NLDTGA-YADVNGAATFPAASTIKTPILVAFFQDVDAGKIKLDER 200

Query: 80  ITISKN-ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           + +  +  +         K G+  +      L+I  S N     + + L          +
Sbjct: 201 LVMRPDLIASEAGIMQYQKPGTKFSALETADLMITISDNTATNMLIDRL-----GGAAAL 255

Query: 139 NNTSKNLGLSATHFMNAHGVVQHG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
           N    + GL     +  + +      + T+A+D+A L   +           + + L+I 
Sbjct: 256 NQRFLSWGL--QQTVIRNWLPDLKGTNTTSAKDLAYLM-MLVGRGDLVSVRSRDRLLDIM 312

Query: 197 GKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRN 250
            +   NT    G   GA    KTG       +     +   Q  +A  +       +   
Sbjct: 313 HRTVTNTLLPQGLGEGAKIAHKTGDIGIVIGDGGMVDMPSGQRYVAAAMVRRPYNDVRGR 372

Query: 251 TRNKVSASLLSMGFYN 266
              +  + L    F  
Sbjct: 373 ELIQQMSRLTYQAFSK 388


>gi|228958789|ref|ZP_04120500.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228800886|gb|EEM47792.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 143

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%)

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             +           K   +        G DG++T F+    ++ V++A   D  LI+VIL
Sbjct: 9   YQFTFKDSQVFNTNKMIYSLNENIKLQGVDGLQTSFSTNGNYSFVSTAKLRDTRLISVIL 68

Query: 245 GALDRNTRNKVSASLLSMGFY 265
            A + N     +  LL  GF 
Sbjct: 69  DADEENISFIETKKLLQYGFD 89


>gi|308049640|ref|YP_003913206.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Ferrimonas balearica DSM 9799]
 gi|307631830|gb|ADN76132.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Ferrimonas balearica DSM 9799]
          Length = 474

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 1  MRQ---FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
          MR    FL+++   + +    F S+  T       +++   G  +A +  D    PAS  
Sbjct: 1  MRLISSFLLLLTPWVFATPADFESLLPTGSQAGLVVINQQ-GETLAAHNADTLMVPASTV 59

Query: 58 KLMTA 62
          KL TA
Sbjct: 60 KLFTA 64


>gi|309951208|emb|CBL80615.1| beta-lactamase [Kluyvera ascorbata]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  +    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAALLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIQAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|30351067|gb|AAP22736.1| beta-lactamase CTX-M-29 [Escherichia coli]
          Length = 291

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 73/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++   A+ +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATAAVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|18390033|gb|AAL68825.1|AF462635_1 extended-spectrum beta-lactamase CTX-M-5 [Acinetobacter baumannii]
          Length = 276

 Score = 48.4 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 41  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 98

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 99  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 158

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 159 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWG 218

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 219 VGDKTGSGDYGTTNDIAVIWPANHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 276


>gi|156720183|dbj|BAF76730.1| D-amino-acid amidase [Brevibacterium iodinum]
          Length = 266

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 40/130 (30%), Gaps = 6/130 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                D ++G  +  +  +   + AS+ K+   +      K+    L   +    +    
Sbjct: 15  SALAFDVDSGERVFAHNENDELDTASMGKVFLLHTALQMFKDGTLDLEERLHRRPSERVD 74

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                   +   +++ +   L+   S N     +   +       ++++ N  + LG   
Sbjct: 75  ESGIWYLMEQDDLSIFDVALLIGAFSDNFATNVLIRRV------GLENVGNQVEKLGYRN 128

Query: 150 THFMNAHGVV 159
           +   +     
Sbjct: 129 SGLHDFLRWP 138


>gi|55822068|ref|YP_140509.1| D-alanyl-D-alanine carboxypeptidase, truncated [Streptococcus
           thermophilus CNRZ1066]
 gi|55738053|gb|AAV61694.1| D-alanyl-D-alanine carboxypeptidase, truncated [Streptococcus
           thermophilus CNRZ1066]
          Length = 189

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 12/131 (9%)

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL----DRNTRNKVSASLLSMGFYN 266
            G DG++TG T  +G + VA + +   S+I VI+ A     D       +  LL+   Y+
Sbjct: 10  KGVDGLQTGTTDLAGSSFVAHSNESGMSIITVIINAEHTDTDDYAWFTATNELLNYVVYH 69

Query: 267 KTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYNTQMKEAKDK------ESHF 320
              +            ++  + +   S++V    K   N   ++    +K          
Sbjct: 70  WESKTIAKKGQA--ISKSQVDVLDGKSKQVSAVAKSDFNIIQKIDANNNKHIKVTTNQIQ 127

Query: 321 IDFEKITLLKN 331
              +    +  
Sbjct: 128 SPAKSGDKVGT 138


>gi|38492412|pdb|1IYS|A Chain A, Crystal Structure Of Class A Beta-Lactamase Toho-1
          Length = 262

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 85  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 145 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 204

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGA--LDRNTRNKV----SASLLSMGF 264
            G KTG       N +A     +   L+ V        +  R +     +A +++ GF
Sbjct: 205 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAERRRDILAAAAKIVTHGF 262


>gi|115033|sp|P22390|BLAC_CITDI RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|40431|emb|CAA44485.1| class A Beta-lactamase [Citrobacter koseri]
 gi|228510|prf||1805231A beta lactamase
          Length = 294

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 62/238 (26%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K M A  V    + +  +L   + I K         + 
Sbjct: 59  ADRSQILY--RGDERFAMCSTSKTMVAAAVLKQSETQHDILQQKMVIKKADLTNWNPVTE 116

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFM 153
                 MTL       +  S N     + E          F + + +T+  L        
Sbjct: 117 KYVDKEMTLAELSAATLQYSDNTAMNKLLEHLGGTSNVTAFARSIGDTTFRLDRKEPELN 176

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +            L      D        Q+            +  A       
Sbjct: 177 TAIPGDERDTTCPLAMAKSLHKLTLGDALAGAQRAQLVEWLKGNTTGGQSIRAGLPEGWV 236

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D+  LI V         A  R      +A +++ G 
Sbjct: 237 VGDKTGAGDYGTTNDIAVIWPEDRAPLILVTYFTQPQQDAKGRKDILAAAAKIVTEGL 294


>gi|160948461|emb|CAJ47138.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 72/265 (27%), Gaps = 26/265 (9%)

Query: 2   RQFLVIIAMAMLSNI-FPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           ++++ +  +++L+ +     +  +  +                 +D  +G  +     D 
Sbjct: 1   KRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|301349385|gb|ADK74336.1| beta-lactamase CTX-M-27 [Shigella sonnei]
          Length = 288

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 7   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 64

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 65  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 124

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 125 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 184

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 185 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 244

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 245 IAVIWPQGRAPLVLVT 260


>gi|288558437|dbj|BAI68283.1| CTX-M 27 extended spectrum beta lactamase [Escherichia coli]
          Length = 277

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 4   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 61

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 62  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 121

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 122 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 181

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 182 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 241

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 242 IAVIWPQGRAPLVLVT 257


>gi|256367787|ref|YP_003108344.1| CTX-M-15 [Escherichia coli]
 gi|302595421|ref|YP_003829283.1| beta-lactamase [Escherichia coli]
 gi|302595555|ref|YP_003829173.1| beta-lactamase [Escherichia coli]
 gi|228480724|gb|ACQ42051.1| CTX-M-15 [Escherichia coli]
 gi|302310196|gb|ADL14067.1| CTX-M-15 [Escherichia coli]
 gi|302310309|gb|ADL14177.1| CTX-M-15 [Escherichia coli]
          Length = 311

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 26  LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 83

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 84  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 143

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 144 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 203

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 204 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 259

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 260 SGGYGTTNDIAVIWPKDRAPLILVT 284


>gi|319900616|ref|YP_004160344.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Bacteroides helcogenes P 36-108]
 gi|319415647|gb|ADV42758.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Bacteroides helcogenes P 36-108]
          Length = 476

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 24/88 (27%), Gaps = 18/88 (20%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPY-----------------YT-LLDTNTGHVI 42
          M++FL  +  ++         IA                           + D   G  +
Sbjct: 1  MKRFLTYLFWSICLLPLSAQDIAMQPDSLSSRIDTLIKYKLPQGSNVAISVFDLTDGKPL 60

Query: 43 AENYPDHPWNPASLTKLMTAYVVFSFLK 70
               D    PAS  KL+T     S  +
Sbjct: 61 YGYQSDKLSRPASTMKLLTTITALSQPQ 88


>gi|259416425|ref|ZP_05740345.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Silicibacter sp. TrichCH4B]
 gi|259347864|gb|EEW59641.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Silicibacter sp. TrichCH4B]
          Length = 497

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 1/56 (1%)

Query: 19  FLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            +            ++ D  TG  +     D    PAS+ K++TA      L    
Sbjct: 51  AILKGARLSGESACVVADARTGQTLESARGDAALPPASVAKVLTALYALDSLGAGY 106


>gi|238864038|gb|ACR66295.1| beta-lactamase CTX-M3 [Escherichia coli]
 gi|238864040|gb|ACR66296.1| beta-lactamase CTX-M3 [Escherichia coli]
          Length = 274

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 67/260 (25%), Gaps = 26/260 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPDHP 50
            +    + +L    P  +     +                 L++  +   ++     D  
Sbjct: 3   LMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY--RADER 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +  +L   + I K+        +      TM+L      
Sbjct: 61  FAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAA 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARD 169
            +  S N     +   +               +   L  T       +       T+ R 
Sbjct: 121 ALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRA 180

Query: 170 MAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           MA             D  +      +KG             A        G KTG     
Sbjct: 181 MAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTGSGDYG 236

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     D+  LI V 
Sbjct: 237 TTNDIAVIWPKDRAPLILVT 256


>gi|170676134|gb|ACB30322.1| CTX-M-28 beta lactamase [Escherichia coli]
 gi|170676136|gb|ACB30323.1| CTX-M-28 beta lactamase [Klebsiella pneumoniae]
 gi|170676138|gb|ACB30324.1| CTX-M-28 beta lactamase [Klebsiella pneumoniae]
 gi|170676140|gb|ACB30325.1| CTX-M-28 beta lactamase [Enterobacter sp. O050109]
          Length = 290

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 80/292 (27%), Gaps = 34/292 (11%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 5   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 62

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 63  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 122

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 123 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 182

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 183 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 238

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A     D+  LI V         A  R      +A +++ G 
Sbjct: 239 SGGYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTNGL 290


>gi|114331058|ref|YP_747280.1| Beta-lactamase [Nitrosomonas eutropha C91]
 gi|114308072|gb|ABI59315.1| Beta-lactamase [Nitrosomonas eutropha C91]
          Length = 319

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 83/268 (30%), Gaps = 19/268 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLDTNTGHVIAENYPDH 49
           R+FL+ +  A+ +      +  E                     +DT +G V+  + PD 
Sbjct: 35  REFLIAVVSALAAMPVLSAASTEGEPASIADIEAKVGGRVGVFAVDTGSGKVL-AHRPDE 93

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS-TMTLDNAL 108
            +   S  K + A  + + +++    L++ +   +         ++       MT+    
Sbjct: 94  RFAMCSTFKWVLAATILAQVEQNLLSLSSHVLYGQADLLAYAPVTSMHAKEGFMTVSELT 153

Query: 109 KLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
           +  IV S N  A  +           +FV+   +    L  +     +          + 
Sbjct: 154 RAAIVVSDNTAANLLLSKLGGPSVVTEFVRSCGDAVTRLDRNEPTLNDNDAGDLRDTTSP 213

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                ++   +  +         +       +   +   A        G KTG       
Sbjct: 214 RAMATLMGNVLCGNRLSSTSRDLLLQWLRDCETGYDRLRAKLPKDWLVGDKTGTGEHGAV 273

Query: 227 NIVASAIQGDQS--LIAVILGALDRNTR 252
           N VA AI   +S  LIA  L +  R  R
Sbjct: 274 NDVAIAIPPGRSPILIAAFL-SEGRADR 300


>gi|27573660|pdb|1IYO|A Chain A, Toho-1 Beta-Lactamase In Complex With Cefotaxime
 gi|27573661|pdb|1IYP|A Chain A, Toho-1 Beta-Lactamase In Complex With Cephalothin
 gi|27573662|pdb|1IYQ|A Chain A, Toho-1 Beta-Lactamase In Complex With Benzylpenicillin
 gi|157830504|pdb|1BZA|A Chain A, Beta-Lactamase Toho-1 From Escherichia Coli Tuh12191
          Length = 262

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 68/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +A    
Sbjct: 85  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTAPTLN 144

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 145 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 204

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGA--LDRNTRNKV----SASLLSMGF 264
            G KTG       N +A     +   L+ V        +  R +     +A +++ GF
Sbjct: 205 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAERRRDILAAAAKIVTHGF 262


>gi|21243888|ref|NP_643470.1| beta lactamase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109491|gb|AAM38006.1| beta lactamase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 297

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 65/228 (28%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +      +   S  K + A  V   + + K  L   + I  +       
Sbjct: 55  LLDSATGKRLGQR-EHERFPMCSTFKFVLAAAVLQQVDQGKLTLAQQVEIHASDMLEHAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHVGGSLSVGELCRATMIYSDNPAANLLFPLVGDPAGVTAFLRGIGDAQTRTDRYEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D  Q     Q+    I  +   +   A  T 
Sbjct: 174 QMNRFVAGDPRDTTTPAAMAATLRTLLLGDALQPASRKQLTDWMIDNRTGDDCLRAGLTA 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L     +   + 
Sbjct: 234 GWKIGDKTGSNGTDTRNDIAILWPPKGRAPMLLTTYLNGAKVDDAARD 281


>gi|284989209|ref|YP_003407763.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Geodermatophilus obscurus DSM 43160]
 gi|284062454|gb|ADB73392.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Geodermatophilus obscurus DSM 43160]
          Length = 487

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           L+ +    ++    +     ++D   G V+ +   D P  PAS  KL+TA    
Sbjct: 104 LAPLLASPALGPGVEAR---VVDVAAGEVLLDQDSDVPSTPASTAKLLTAVAAL 154


>gi|584844|sp|P37323|BLA4_KLEPN RecName: Full=Beta-lactamase SHV-4; AltName: Full=Ceftazidimase 5;
           Short=CAZ-5
          Length = 265

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQLQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------ASKRGARGIVALLGPNNKAER 232


>gi|29692031|gb|AAO88912.1| CTX-M-33 beta-lactamase [Escherichia coli]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYSPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|281335982|gb|ADA62548.1| CTX-M-36-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|281335930|gb|ADA62522.1| CTX-M-3-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|302340959|gb|ADL27532.1| class A beta-lactamase CTX-M-99 [Klebsiella pneumoniae]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 65/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  + +    A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTESTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|29653373|ref|NP_819065.1| D-alanyl-meso-diaminopimelate endopeptidase [Coxiella burnetii
          RSA 493]
 gi|29540635|gb|AAO89579.1| D-alanyl-meso-diaminopimelate endopeptidase [Coxiella burnetii
          RSA 493]
          Length = 477

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 14/82 (17%)

Query: 1  MRQ--FLVIIAMAMLSNIFPFLSIAE---------TNKLPY---YTLLDTNTGHVIAENY 46
          M++  +L I+     S +F                + K      + + D  TG VI    
Sbjct: 1  MKKPFYLAILLSLFCSPLFAVEKQNPQTNINTILRSIKSKANLGFIVSDVKTGRVIFSER 60

Query: 47 PDHPWNPASLTKLMTAYVVFSF 68
              ++PAS  KL TA     +
Sbjct: 61 SQFLFSPASTQKLFTAVAALYY 82


>gi|237511599|gb|ACQ99521.1| CTX-M-90 extended-spectrum beta-lactamase [Salmonella sp. YLD3]
 gi|260779996|gb|ACX50627.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|193227724|emb|CAQ42486.1| beta-lactamase [Kluyvera ascorbata]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWG 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|323709075|gb|ADY02554.1| beta-lactamase CTX-M-105 [Escherichia coli]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQREQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|273161388|gb|ACZ97622.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 253

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 36  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 96  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 155

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 156 LNEALXGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 215

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 216 WFIADKTG------------AGERGARGIVALLGPNNKAER 244


>gi|119964179|ref|YP_945959.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Arthrobacter aurescens TC1]
 gi|119951038|gb|ABM09949.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Arthrobacter aurescens TC1]
          Length = 481

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++ +       +        ++D +TG V+ +        PAS  KL+TA     
Sbjct: 85  VAKLLDATLKPDGAGSISGVVMDASTGQVLFDREATANRIPASNMKLLTAVSALK 139


>gi|77158013|gb|ABA62022.1| CTX-M-51 beta-lactamase [Escherichia coli]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTAGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|281335956|gb|ADA62535.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|281335910|gb|ADA62512.1| CTX-M-22-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|161830665|ref|YP_001597802.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Coxiella burnetii RSA 331]
 gi|161762532|gb|ABX78174.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Coxiella burnetii RSA 331]
          Length = 477

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 14/82 (17%)

Query: 1  MRQ--FLVIIAMAMLSNIFPFLSIAE---------TNKLPY---YTLLDTNTGHVIAENY 46
          M++  +L I+     S +F                + K      + + D  TG VI    
Sbjct: 1  MKKPFYLAILLSLFCSPLFAVEKQNPQTNINTILRSIKSKANLGFIVSDVKTGRVIFSER 60

Query: 47 PDHPWNPASLTKLMTAYVVFSF 68
              ++PAS  KL TA     +
Sbjct: 61 SQFLFSPASTQKLFTAVAALYY 82


>gi|66932795|gb|AAY58235.1| extended-spectrum beta-lactamase CTX-M-3 [Escherichia coli]
 gi|75914697|gb|ABA29760.1| extended-spectrum beta-lactamase CTX-M-3-like [Escherichia coli]
 gi|84621436|gb|ABC59555.1| beta lactamase CTX-M-3 [Klebsiella pneumoniae]
          Length = 282

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|281335904|gb|ADA62509.1| CTX-M-15-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|224223444|gb|ACN39712.1| CTX-M-type extended spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +    N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYGDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|46401610|dbj|BAD16611.1| beta-lactamase CTX-M-36 [Escherichia coli]
 gi|281335902|gb|ADA62508.1| CTX-M-36 beta-lactamase [synthetic construct]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|16444918|emb|CAD08929.1| CTX-M-21 beta-lactamase [Escherichia coli]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 52  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 109

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 110 PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 169

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 170 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 229

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 230 TSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 289

Query: 263 GF 264
           G 
Sbjct: 290 GL 291


>gi|66361079|pdb|1YLT|A Chain A, Atomic Resolution Structure Of Ctx-M-14 Beta-Lactamase
 gi|66361085|pdb|1YLZ|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-14
           Beta-Lactamase Complexed With Ceftazidime-Like Boronic
           Acid
 gi|66361086|pdb|1YLZ|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-14
           Beta-Lactamase Complexed With Ceftazidime-Like Boronic
           Acid
          Length = 263

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 24  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 82  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 142 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 202 TSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|238801224|gb|ACR56331.1| extended-spectrum beta-lactamase CTX-M-89 [Enterobacter cloacae]
          Length = 291

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 73/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWRIK-----TDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA     +       D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLALGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|133919281|emb|CAM12803.1| class A beta-lactamase [Leminorella grimontii]
          Length = 294

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 81/287 (28%), Gaps = 28/287 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL----------PYY------TLLD-TNTGHVIAENY 46
            +      +L    P  + A ++                      L+D  +   V+    
Sbjct: 10  LMAAAVAPLLLGCAPLWASAASDAAGIQQKLANLEKSAGGRLGVALIDTEDNSRVLY--R 67

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            D  +   S +K+M    V    +  K +L+  I I K         +     S+MTL+ 
Sbjct: 68  GDERFAMCSTSKVMAVAAVLKQSETDKGVLSKKIKIKKADLVNWNPITEKHVNSSMTLEE 127

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I   L    K   F + +++T+  L  +      A    +    
Sbjct: 128 LSAATLQYSDNVAMNKIIAHLGGPNKVTAFARSIDDTTFRLDRTEPSLNTAIPGDERDTT 187

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T       L      +        Q+            +  A        G KTG     
Sbjct: 188 TPLAMAESLRNLTLGNALGETQRAQLVEWLKGNTTGGESIRAGLPKAWIVGDKTGSGDYG 247

Query: 225 GFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
             N +A     ++  LI V         A  R      +A +++ G 
Sbjct: 248 TTNDIAVIWPENRAPLILVTYFTQPKQDAKSRRDVLAAAAKIVAEGL 294


>gi|238863970|gb|ACR66261.1| beta-lactamase CTX-M15 [Kluyvera intermedia]
 gi|238863972|gb|ACR66262.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238863974|gb|ACR66263.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238863976|gb|ACR66264.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238863978|gb|ACR66265.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238863980|gb|ACR66266.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238863982|gb|ACR66267.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238863984|gb|ACR66268.1| beta-lactamase CTX-M15 [Raoultella terrigena]
 gi|238863986|gb|ACR66269.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238863988|gb|ACR66270.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238863990|gb|ACR66271.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238863992|gb|ACR66272.1| beta-lactamase CTX-M15 [Raoultella terrigena]
 gi|238863994|gb|ACR66273.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238863996|gb|ACR66274.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238863998|gb|ACR66275.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864000|gb|ACR66276.1| beta-lactamase CTX-M15 [Raoultella terrigena]
 gi|238864002|gb|ACR66277.1| beta-lactamase CTX-M15 [Klebsiella oxytoca]
 gi|238864004|gb|ACR66278.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864006|gb|ACR66279.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864008|gb|ACR66280.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864010|gb|ACR66281.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864012|gb|ACR66282.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238864014|gb|ACR66283.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238864016|gb|ACR66284.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864018|gb|ACR66285.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864020|gb|ACR66286.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238864022|gb|ACR66287.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864024|gb|ACR66288.1| beta-lactamase CTX-M15 [Klebsiella sp. 49]
 gi|238864026|gb|ACR66289.1| beta-lactamase CTX-M15 [Klebsiella pneumoniae]
 gi|238864028|gb|ACR66290.1| beta-lactamase CTX-M15 [Klebsiella sp. 51]
 gi|238864030|gb|ACR66291.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864032|gb|ACR66292.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864034|gb|ACR66293.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|238864036|gb|ACR66294.1| beta-lactamase CTX-M15 [Escherichia coli]
          Length = 274

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 67/260 (25%), Gaps = 26/260 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPDHP 50
            +    + +L    P  +     +                 L++  +   ++     D  
Sbjct: 3   LMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY--RADER 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +  +L   + I K+        +      TM+L      
Sbjct: 61  FAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAA 120

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARD 169
            +  S N     +   +               +   L  T       +       T+ R 
Sbjct: 121 ALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRA 180

Query: 170 MAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           MA             D  +      +KG             A        G KTG     
Sbjct: 181 MAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTGSGGYG 236

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     D+  LI V 
Sbjct: 237 TTNDIAVIWPKDRAPLILVT 256


>gi|157956218|gb|ABW06478.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 268

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 67/260 (25%), Gaps = 26/260 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPDHP 50
            +    + +L    P  +     +                 L++  +   ++     D  
Sbjct: 1   LMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY--RADER 58

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +  +L   + I K+        +      TM+L      
Sbjct: 59  FAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAA 118

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARD 169
            +  S N     +   +               +   L  T       +       T+ R 
Sbjct: 119 ALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRA 178

Query: 170 MAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           MA             D  +      +KG             A        G KTG     
Sbjct: 179 MAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTGSGGYG 234

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     D+  LI V 
Sbjct: 235 TTNDIAVIWPKDRAPLILVT 254


>gi|82655072|emb|CAJ19604.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
 gi|82655074|emb|CAJ19605.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 66/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQITLSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDERLDRRIRYPQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTSHALSDRSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPNGKAER 253


>gi|209524499|ref|ZP_03273047.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Arthrospira maxima CS-328]
 gi|209494957|gb|EDZ95264.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Arthrospira maxima CS-328]
          Length = 474

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 21/82 (25%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLD--------------TNTG 39
          M+   + +   ++S   P ++    +  P           LD               ++G
Sbjct: 1  MKSIAIALFSTLISFSVPVMANEPRSICPAVLETEINAIALDPKFSRSRWGIMVESLDSG 60

Query: 40 HVIAENYPDHPWNPASLTKLMT 61
           V+     +  + PAS  KL+T
Sbjct: 61 QVLYSLDSERFFLPASTIKLLT 82


>gi|146387089|pdb|2P74|A Chain A, Ctx-M-9 Class A Beta-Lactamase Apo Crystal Structure At
           0.88 Angstrom Resolution
 gi|146387090|pdb|2P74|B Chain B, Ctx-M-9 Class A Beta-Lactamase Apo Crystal Structure At
           0.88 Angstrom Resolution
 gi|225734188|pdb|3G2Y|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 1
           (Gf4)
 gi|225734189|pdb|3G2Y|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 1
           (Gf4)
          Length = 263

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 24  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 82  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 142 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 202 TSWTAGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|66361077|pdb|1YLJ|A Chain A, Atomic Resolution Structure Of Ctx-M-9 Beta-Lactamase
 gi|66361081|pdb|1YLY|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Complexed With Ceftazidime-Like Boronic Acid
 gi|66361082|pdb|1YLY|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Complexed With Ceftazidime-Like Boronic Acid
 gi|66361089|pdb|1YM1|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Complexed With A Boronic Acid Inhibitor (Sm2)
 gi|66361090|pdb|1YM1|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Complexed With A Boronic Acid Inhibitor (Sm2)
 gi|66361102|pdb|1YMS|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Complexed With Nafcinin-Like Boronic Acid Inhibitor
 gi|66361103|pdb|1YMS|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Complexed With Nafcinin-Like Boronic Acid Inhibitor
 gi|66361104|pdb|1YMX|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Covalently Linked To Cefoxitin
 gi|66361105|pdb|1YMX|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 Beta-Lactamase
           Covalently Linked To Cefoxitin
 gi|225734190|pdb|3G2Z|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 2
           (Gz2)
 gi|225734191|pdb|3G2Z|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 2
           (Gz2)
 gi|225734192|pdb|3G30|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 3
           (G30)
 gi|225734193|pdb|3G31|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 4
           (Gf1)
 gi|225734194|pdb|3G31|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 4
           (Gf1)
 gi|225734195|pdb|3G32|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 6
           (3g3)
 gi|225734196|pdb|3G32|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 6
           (3g3)
 gi|225734197|pdb|3G34|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 11
           (1ce)
 gi|225734198|pdb|3G34|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 11
           (1ce)
 gi|225734199|pdb|3G35|A Chain A, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 12
           (F13)
 gi|225734200|pdb|3G35|B Chain B, Ctx-M-9 Class A Beta-Lactamase Complexed With Compound 12
           (F13)
          Length = 263

 Score = 48.0 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 24  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 82  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 142 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 202 TSWTAGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|281335928|gb|ADA62521.1| CTX-M-30-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|124021056|gb|ABM88808.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
          Length = 290

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|82655098|emb|CAJ19618.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 65/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYIEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A     L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 RLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|27383434|ref|NP_774964.1| ES-beta-lactamase [Citrobacter freundii]
 gi|190410425|ref|YP_001965928.1| CTX-M-3 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|216967815|ref|YP_002333323.1| beta-lactamase CTX-M3 [Klebsiella pneumoniae]
 gi|256367540|ref|YP_003108099.1| beta-lactamase CTX-M-3 precursor [Escherichia coli]
 gi|2765065|emb|CAA71321.1| ES-beta-lactamase [Citrobacter freundii]
 gi|13560279|dbj|BAB40925.1| CTX-M-3 type beta-lactamase [Citrobacter koseri]
 gi|27261287|gb|AAN87628.1| ES-beta-lactamase [Citrobacter freundii]
 gi|31096322|gb|AAP43781.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|39984736|gb|AAR36116.1| extended-spectrum beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|45535499|emb|CAG14930.1| beta-lactamase CTX-M-3 [Kluyvera ascorbata]
 gi|47496744|dbj|BAD20193.1| CTX-M-3 type beta-lactamase [Salmonella enterica subsp. enterica
           serovar Senftenberg]
 gi|50789185|dbj|BAD34467.1| beta-lactamase [Citrobacter freundii]
 gi|50789187|dbj|BAD34468.1| beta-lactamase [Citrobacter koseri]
 gi|50789190|dbj|BAD34469.1| beta-lactamase [Enterobacter aerogenes]
 gi|50789192|dbj|BAD34470.1| beta-lactamase [Enterobacter cloacae]
 gi|50789195|dbj|BAD34471.1| beta-lactamase [Klebsiella pneumoniae]
 gi|50789197|dbj|BAD34472.1| beta-lactamase [Serratia marcescens]
 gi|50789200|dbj|BAD34473.1| beta-lactamase [Klebsiella oxytoca]
 gi|50789202|dbj|BAD34474.1| beta-lactamase [Escherichia coli]
 gi|50789204|dbj|BAD34475.1| beta-lactamase [Escherichia coli]
 gi|54292585|gb|AAV32431.1| beta-lactamase [Escherichia coli]
 gi|70671424|emb|CAJ01336.1| CTX-M-3 beta-lactamase [Serratia marcescens]
 gi|70671427|emb|CAJ01338.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|70671437|emb|CAJ01346.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|70671443|emb|CAJ01351.1| beta-lactamase CTX-M-3 [Proteus mirabilis]
 gi|71979779|dbj|BAE17045.1| beta-lactamase CTX-M-3 [Escherichia coli]
 gi|71979781|dbj|BAE17046.1| beta-lactamase CTX-M-3 [Escherichia coli]
 gi|83265610|gb|ABB97553.1| beta-lactamase CTX-M-3 [Escherichia coli]
 gi|83416719|gb|ABC18324.1| beta-lactamase CTX-M-3 [Enterobacter cloacae]
 gi|83416721|gb|ABC18325.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|84657407|gb|ABC60031.1| extended-spectrum beta-lactamase CTX-M-3 [Enterobacter aerogenes]
 gi|84657409|gb|ABC60032.1| extended spectrum beta-lactamase CTX-M-3 [Citrobacter freundii]
 gi|112385954|gb|ABI17941.1| beta-lactamase [Salmonella sp. 577]
 gi|130918089|gb|ABO32642.1| extended-spectrum beta-lactamase CTX-M-3 [Enterobacter aerogenes]
 gi|146151219|gb|ABQ02985.1| CTX-M-3 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|147712723|gb|ABQ45880.1| extended-spectrum beta-lactamase CTX-M-3 [Proteus mirabilis]
 gi|208609561|dbj|BAG72215.1| beta-lactamase CTX-M-3 [Enterobacter aerogenes]
 gi|209483436|gb|ACI47257.1| extended-spectrum class A beta-lactamase CTX-M-3 [Escherichia coli]
 gi|215397987|gb|ACJ65264.1| beta-lactamase CTX-M3 [Klebsiella pneumoniae]
 gi|221149274|gb|ACM04460.1| CTX-M-3 extended-spectrum beta-lactamase [Escherichia coli]
 gi|224696956|emb|CAR82577.1| beta-lactamase [Escherichia coli]
 gi|228480795|gb|ACQ42121.1| beta-lactamase CTX-M-3 precursor [Escherichia coli]
 gi|254871262|gb|ACT83744.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|254871266|gb|ACT83747.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|254871271|gb|ACT83750.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|254927429|gb|ACT85946.1| beta-lactamase CTX-M-3 [Klebsiella pneumoniae]
 gi|256858909|gb|ACV31764.1| beta-lactamase CTX-M-3 [Escherichia coli]
 gi|297498980|gb|ACU44514.2| beta-lactamase CTX-M-3 [Escherichia coli]
 gi|324036033|gb|ADY17613.1| beta-lactamase CTX-M-3 [Enterobacter cloacae]
 gi|324036037|gb|ADY17616.1| beta-lactamase CTX-M-3 [Enterobacter aerogenes]
 gi|324036041|gb|ADY17619.1| beta-lactamase CTX-M-3 [Enterobacter cloacae]
 gi|324036045|gb|ADY17622.1| beta-lactamase CTX-M-3 [Enterobacter aerogenes]
 gi|324036048|gb|ADY17624.1| beta-lactamase CTX-M-3 [Enterobacter cloacae]
 gi|324036051|gb|ADY17626.1| beta-lactamase CTX-M-3 [Enterobacter cloacae]
 gi|324036054|gb|ADY17628.1| beta-lactamase CTX-M-3 [Enterobacter cloacae]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|281336002|gb|ADA62558.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|195954350|gb|ACG58882.1| SHV-40 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 249

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 21/257 (8%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASLT 57
           + ++A   L+       + +  +             +D  +G  +     D  +   S  
Sbjct: 1   ISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMSTF 60

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K++    V + +      L   I   +         S       MT+       I  S N
Sbjct: 61  KVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDN 120

Query: 118 DIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             A  +            F++ + +    L    T    A         T A   A L  
Sbjct: 121 SAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRK 180

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            + +         Q+    +  +       +V         KTG            A + 
Sbjct: 181 LLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------AGER 228

Query: 236 DQSLIAVILGALDRNTR 252
               I  +LG  ++  R
Sbjct: 229 GGRGIVALLGPNNKAER 245


>gi|19526204|gb|AAL86924.1| beta-lactamase CTX-M-22 [Klebsiella pneumoniae]
 gi|61992246|gb|AAX58181.1| beta-lactamase CTX-M-22 [Enterobacter cloacae]
 gi|83415873|gb|ABC18115.1| extended spectrum beta-lactamase CTX-M-22 [Serratia marcescens]
 gi|166092026|gb|ABY82050.1| beta-lactamase CTX-M-22 [Escherichia coli]
 gi|166092030|gb|ABY82052.1| beta-lactamase CTX-M-22 [Escherichia coli]
 gi|281335918|gb|ADA62516.1| CTX-M-22 beta-lactamase [synthetic construct]
 gi|300392844|gb|ADK11443.1| beta-lactamase CTX-M-22 [Serratia liquefaciens]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|254521673|ref|ZP_05133728.1| beta-lactamase [Stenotrophomonas sp. SKA14]
 gi|219719264|gb|EED37789.1| beta-lactamase [Stenotrophomonas sp. SKA14]
          Length = 342

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +  AS+TK++TA + F  ++E +  L   
Sbjct: 62 DADTRYPIASVTKMVTAILAFKLIEEGRLSLDDH 95


>gi|56554773|gb|AAV97957.1| CTX-M type extended spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDGTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|151861|gb|AAA26087.1| beta-lactamase [Plasmid R974]
          Length = 287

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 66/266 (24%), Gaps = 26/266 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADAMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKT-DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
              A L     T          Q+    +  +       +V         KTG       
Sbjct: 181 SMAATLRNVGLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------- 233

Query: 227 NIVASAIQGDQSLIAVILGALDRNTR 252
                A +     I  +LG  ++  R
Sbjct: 234 -----AGERGARGIVALLGPNNKAER 254


>gi|77464153|ref|YP_353657.1| penicillin binding protein [Rhodobacter sphaeroides 2.4.1]
 gi|77388571|gb|ABA79756.1| possible penicillin binding protein [Rhodobacter sphaeroides
          2.4.1]
          Length = 485

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 14/37 (37%)

Query: 31 YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          Y + D  +G V+          PAS  K +TA     
Sbjct: 58 YVVADARSGTVLEAANAALRLPPASTAKTVTALYGLE 94


>gi|295345508|gb|ADG01902.1| CTX-M-15 [Pantoea agglomerans]
          Length = 293

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 8   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 65

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 66  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 125

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 126 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 185

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 186 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 241

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 242 SGGYGTTNDIAVIWPKDRAPLILVT 266


>gi|281335960|gb|ADA62537.1| CTX-M-28-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|238801268|gb|ACR56347.1| beta-lactamase CTX-M-28 [Klebsiella pneumoniae]
          Length = 284

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|197215901|gb|ACH53188.1| CTX-M-65 beta-lactamase [Escherichia coli]
          Length = 278

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 71/278 (25%), Gaps = 24/278 (8%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHPWNPAS 55
            + +L    P  +     +     L            +D  +   V+     D  +   S
Sbjct: 3   CIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDERFPMCS 60

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
            +K+M A  V    + +K +L  P+ I           +      TMTL       +  S
Sbjct: 61  TSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAAALQYS 120

Query: 116 ANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
            N     +            F + + + +  L  +      A         T       L
Sbjct: 121 DNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRAMAQTL 180

Query: 174 SWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAI 233
                          Q+            +  A        G KTG       N +A   
Sbjct: 181 RQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTNDIAVIW 240

Query: 234 QGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
              +  L+ V         A  R      +A +++ G 
Sbjct: 241 PQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 278


>gi|8134350|sp|Q47066|BLT1_ECOLX RecName: Full=Beta-lactamase Toho-1; Flags: Precursor
 gi|1037162|dbj|BAA07082.1| beta-lactamase (Toho-1) [Escherichia coli]
 gi|50400168|gb|AAT76431.1| beta-lactamase TOHO-1 [Shigella flexneri]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGA--LDRNTRNKV----SASLLSMGF 264
            G KTG       N +A     +   L+ V        +  R +     +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAERRRDILAAAAKIVTHGF 291


>gi|323709061|gb|ADY02545.1| beta-lactamase CTX-M-101 [Escherichia coli]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 73/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
             +   +  S N     +   +               +   L  T       +       
Sbjct: 124 ELIAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|308198799|gb|ADO17948.1| beta-lactamase CTX-M-98 [Escherichia coli]
 gi|313510882|gb|ADR66516.1| beta-lactamase CTX-M-98 [Escherichia coli]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|300986936|ref|ZP_07177912.1| conserved domain protein [Escherichia coli MS 45-1]
 gi|300407822|gb|EFJ91360.1| conserved domain protein [Escherichia coli MS 45-1]
 gi|307626442|gb|ADN70746.1| D-alanyl-D-alanine carboxypeptidase [Escherichia coli UM146]
 gi|315295234|gb|EFU54569.1| conserved domain protein [Escherichia coli MS 153-1]
          Length = 63

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 13/65 (20%)

Query: 1  MRQFLVIIAMAMLSNIF--------PFLSIAETNKLPYYTLLDTNTGHVI---AENYPDH 49
          M++ L+I A   + N+         PF           + L+D  TG ++          
Sbjct: 1  MKRRLIIAASLFVFNLSSGFAAENIPFSPQPPEIHAGSWVLMDYTTGQILTGVMSINS-- 58

Query: 50 PWNPA 54
             PA
Sbjct: 59 AIPPA 63


>gi|154707193|ref|YP_001423565.1| D-alanyl-meso-diaminopimelate endopeptidase [Coxiella burnetii
          Dugway 5J108-111]
 gi|154356479|gb|ABS77941.1| D-alanyl-meso-diaminopimelate endopeptidase [Coxiella burnetii
          Dugway 5J108-111]
          Length = 477

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 14/82 (17%)

Query: 1  MRQ--FLVIIAMAMLSNIFPFLSIAE---------TNKLPY---YTLLDTNTGHVIAENY 46
          M++  +L I+     S +F                + K      + + D  TG VI    
Sbjct: 1  MKKPFYLAILLSLFCSPLFAVEKQNPQTNINTILRSIKSKANLGFIVSDVKTGRVIFSER 60

Query: 47 PDHPWNPASLTKLMTAYVVFSF 68
              ++PAS  KL TA     +
Sbjct: 61 SQFLFSPASTQKLFTAVAALYY 82


>gi|45934805|gb|AAS79469.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           bikiniensis]
          Length = 231

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 10/194 (5%)

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV----KS 115
           MTAYV+      +       I + + A+                  ++ + L+      S
Sbjct: 1   MTAYVILEEHPLRPDEDGPLIEVDRTAAHEAGVGGESTVPVRSGERHSQRRLLELLLIPS 60

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            N++A  +A     ++  FV  M   +  LG+  T +  A G+ +    +TA D   L+ 
Sbjct: 61  GNNVARLLARWDSGSQAAFVTKMRRAAVRLGMKDTVYTGASGI-EPTTTSTAADQVRLTR 119

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS--AI 233
               D          +          NTN  + T  G  G+KTG +  +G N++ +    
Sbjct: 120 AAMEDPVFRAVVATRETTVPGLGTITNTNPLLDT-PGVLGVKTGSSTPAGGNLLWAYEVR 178

Query: 234 QGD--QSLIAVILG 245
            G   + L+  +L 
Sbjct: 179 VGGAPRLLVGAVLH 192


>gi|281335938|gb|ADA62526.1| CTX-M-36-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|325533930|pdb|3N4I|A Chain A, Crystal Structure Of The Shv-1 D104e
           Beta-LactamaseBETA-Lactamase Inhibitor Protein (Blip)
           Complex
          Length = 265

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVEYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|317123754|ref|YP_004097866.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Intrasporangium
           calvum DSM 43043]
 gi|315587842|gb|ADU47139.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Intrasporangium
           calvum DSM 43043]
          Length = 506

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
               +            + D  +G ++ +        PAS TKL+TA  V
Sbjct: 84  ALAGVVTLPALADASLVVRDGQSGGILYDRGGSQRRIPASTTKLLTAAAV 133


>gi|281335942|gb|ADA62528.1| CTX-M-15-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|56463239|gb|AAV91761.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 62/224 (27%), Gaps = 3/224 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    + + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAMLARVDAGDQQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNK 254
                KTG +      IVA  +  ++   I VI       +R +
Sbjct: 200 WFIADKTGASKRGARGIVALLVPNNKAERIVVIYLRDTPASRAE 243


>gi|41056931|ref|NP_957562.1| hypothetical protein pC15-1a_016 [Escherichia coli]
 gi|256367639|ref|YP_003108206.1| blaCTX-M-15 [Escherichia coli]
 gi|291289023|ref|YP_003517526.1| beta-lactamase [Klebsiella pneumoniae]
 gi|324120107|ref|YP_004249868.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
 gi|12232328|gb|AAG48377.1| beta-lactamase UOE-1 [Escherichia coli]
 gi|15636730|gb|AAL02127.1| beta-lactamase [Escherichia coli]
 gi|20145492|emb|CAC84572.1| cefotaxime-hydrolyzing beta-lactamase, CTX-M-11 [Escherichia coli]
 gi|38606068|gb|AAR25032.1| CTX-M-15 [Escherichia coli]
 gi|38640800|gb|AAR26004.1| CTX-M-15 [Escherichia coli]
 gi|39545938|gb|AAR28032.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|48994622|gb|AAT48020.1| CTX-M-15 beta-lactamase [Escherichia coli]
 gi|48994628|gb|AAT48025.1| CTX-M-15 beta-lactamase [Escherichia coli]
 gi|63029820|gb|AAY27811.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|66474797|gb|AAY46940.1| extended-spectrum beta-lactamase CTX-M-15 [Klebsiella pneumoniae]
 gi|71273532|emb|CAJ13638.1| beta-lactamase [Escherichia coli]
 gi|82393680|gb|AAY46939.1| extended-spectrum beta-lactamase CTX-M-15 [Klebsiella pneumoniae]
 gi|83356019|gb|ABC16604.1| extended-spectrum beta-lactamase CTX-M-15 [Enterobacter cloacae]
 gi|83356021|gb|ABC16605.1| extended-spectrum beta-lactamase CTX-M-15 [Klebsiella pneumoniae]
 gi|85681941|gb|ABC73077.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
 gi|92428672|gb|ABE76829.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
 gi|92428674|gb|ABE76830.1| CTX-M-15 beta-lactamase [Escherichia coli]
 gi|116643123|gb|ABK06381.1| beta-lactamase bla-CTX-M-15 [Escherichia coli]
 gi|164665320|gb|ABY66122.1| CTX-m-3-like beta-lactamase [Escherichia coli]
 gi|189172076|gb|ACD80393.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
 gi|224381576|gb|ACN41909.1| CTX-M15 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Bonn]
 gi|224381578|gb|ACN41910.1| CTX-M15 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Enteritidis]
 gi|224579164|gb|ACN58169.1| CTX-M-15 extended-spectrum beta-lactamase [Escherichia coli]
 gi|224799002|gb|ACN62990.1| CTX-M-15 beta-lactamase [Salmonella enterica subsp. enterica
           serovar Enteritidis]
 gi|225579692|gb|ACN94015.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579700|gb|ACN94019.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579706|gb|ACN94022.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579708|gb|ACN94023.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579714|gb|ACN94026.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579716|gb|ACN94027.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579720|gb|ACN94029.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579722|gb|ACN94030.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579726|gb|ACN94032.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579728|gb|ACN94033.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579732|gb|ACN94035.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|225579738|gb|ACN94038.1| beta-lactamase blaCTX-M-15 [Klebsiella pneumoniae]
 gi|228480576|gb|ACQ41904.1| blaCTX-M-15 [Escherichia coli]
 gi|254927438|gb|ACT85952.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|254966772|gb|ACT97388.1| CTX-M-15 beta-lactamase [mixed culture bacterium AX_gF1DD01_02]
 gi|254966897|gb|ACT97470.1| CTX-M-15 beta-lactamase [mixed culture bacterium CA_gF1DD01_03]
 gi|254966905|gb|ACT97475.1| CTX-M-15 beta-lactamase [mixed culture bacterium CA_gF1DD01_14]
 gi|254966907|gb|ACT97476.1| CTX-M-15 beta-lactamase [mixed culture bacterium CA_gF1DD01_15]
 gi|254966954|gb|ACT97506.1| CTX-M-15 beta-lactamase [mixed culture bacterium CF_gF2-3DD01_01]
 gi|254967173|gb|ACT97636.1| CTX-M-15 beta-lactamase [mixed culture bacterium PE_gF1DD01_14]
 gi|254967204|gb|ACT97656.1| CTX-M-15 beta-lactamase [uncultured organism]
 gi|256956391|gb|ACV32734.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|256956413|gb|ACV32752.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|256956416|gb|ACV32754.1| beta-lactamase CTX-M15 [Escherichia coli]
 gi|256956428|gb|ACV32764.1| beta-lactamase [Escherichia coli]
 gi|260914766|gb|ACX54236.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|290792154|gb|ADD63480.1| beta-lactamase [Klebsiella pneumoniae]
 gi|297598717|gb|ADI48249.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|300250868|gb|ADJ95777.1| beta-lactamase CTX-M-15 [Enterobacter cloacae]
 gi|308194910|gb|ADO16967.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|308194914|gb|ADO16970.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|308194918|gb|ADO16973.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|308194922|gb|ADO16976.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|308194926|gb|ADO16979.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|323388235|gb|ADX60384.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
 gi|324036013|gb|ADY17598.1| beta-lactamase CTX-M-15 [Enterobacter cloacae]
 gi|324036017|gb|ADY17601.1| beta-lactamase CTX-M-15 [Enterobacter cloacae]
 gi|324036021|gb|ADY17604.1| beta-lactamase CTX-M-15 [Citrobacter freundii]
 gi|324036025|gb|ADY17607.1| beta-lactamase CTX-M-15 [Enterobacter cloacae]
 gi|324036029|gb|ADY17610.1| beta-lactamase CTX-M-15 [Enterobacter aerogenes]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|8469129|sp|O65975|BLC5_SALTY RecName: Full=Beta-lactamase CTX-M-5; AltName: Full=Cefotaximase 5;
           Flags: Precursor
 gi|3021577|emb|CAA06311.1| beta-lactamase [Salmonella typhimurium]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 80/288 (27%), Gaps = 26/288 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +R+ ++ +   +          A+ N +                  L++  +   ++   
Sbjct: 6   IRRSMLTVMATLPLLFSSATLHAQANSVQQQLEALEKSSGGRLGVALINTADNSQILYL- 64

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    +  K +L   + I  +        +      TMTL 
Sbjct: 65  -ADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKASDLVNYNPIAEKHVNGTMTLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   L   +K   F + + + +  L  +     +A        
Sbjct: 124 ELGAGALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNSAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            T       L               Q+            +  A        G KTG    
Sbjct: 184 TTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKCWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
              N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 244 GTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|257136310|gb|ACV44455.1| beta-lactamase OXY-2 [Klebsiella oxytoca]
          Length = 289

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDLEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      D        Q+            +  A        G KTG       
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVGDKTGTGDYGTT 244

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 245 NDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 289


>gi|208503029|gb|ACI29345.1| extended spectrum CTX-M-83 beta-lactamase [Salmonella enterica
           subsp. enterica serovar Derby]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 73/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +  HV+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTHVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|153206148|ref|ZP_01945411.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Coxiella burnetii 'MSU Goat Q177']
 gi|165919239|ref|ZP_02219325.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Coxiella burnetii RSA 334]
 gi|212217871|ref|YP_002304658.1| D-alanyl-meso-diaminopimelate endopeptidase [Coxiella burnetii
          CbuK_Q154]
 gi|120577278|gb|EAX33902.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Coxiella burnetii 'MSU Goat Q177']
 gi|165917033|gb|EDR35637.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Coxiella burnetii RSA 334]
 gi|212012133|gb|ACJ19513.1| D-alanyl-meso-diaminopimelate endopeptidase [Coxiella burnetii
          CbuK_Q154]
          Length = 477

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 14/82 (17%)

Query: 1  MRQ--FLVIIAMAMLSNIFPFLSIAE---------TNKLPY---YTLLDTNTGHVIAENY 46
          M++  +L I+     S +F                + K      + + D  TG VI    
Sbjct: 1  MKKPFYLAILLSLFCSPLFAVEKQNPQTNINTILRSIKSKANLGFIVSDVKTGRVIFSER 60

Query: 47 PDHPWNPASLTKLMTAYVVFSF 68
              ++PAS  KL TA     +
Sbjct: 61 SQFLFSPASTQKLFTAVAALYY 82


>gi|32130559|gb|AAL78281.2| K1 beta-lactamase [Klebsiella oxytoca]
          Length = 289

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDLEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      D        Q+            +  A        G KTG       
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVGDKTGGGDYGTT 244

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 245 NDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 289


>gi|71906063|ref|YP_283650.1| D-alanyl-D-alanine carboxypeptidase PBP3 [Dechloromonas aromatica
          RCB]
 gi|71845684|gb|AAZ45180.1| D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS
          family S13 [Dechloromonas aromatica RCB]
          Length = 479

 Score = 47.7 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 10/93 (10%)

Query: 1  MRQFLVIIAMAMLSNIFP--------FLSIAETNKLPY-YTLLDT-NTGHVIAENYPDHP 50
          +++   +I   +                  A          ++   ++G  +  +     
Sbjct: 3  IKRLAPLILAGISLAALADGLPPSVLGALKAAQIPAKNVAVVIQAVDSGSPLVAHNASQA 62

Query: 51 WNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           NPAS+ KL+T Y     L       TT  T S
Sbjct: 63 MNPASVMKLVTTYAALDLLGPAYTWKTTVWTES 95


>gi|317496478|ref|ZP_07954828.1| hypothetical protein HMPREF0432_01432 [Gemella moribillum M424]
 gi|316913409|gb|EFV34905.1| hypothetical protein HMPREF0432_01432 [Gemella moribillum M424]
          Length = 350

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 112/298 (37%), Gaps = 24/298 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE----TNKLPY--------YTLLDTNTGHVIAENYPD 48
           MR   + I   +L  + P L+ AE     N              + + NTG +I++   +
Sbjct: 1   MRLKKISILSILLVFLLPNLAKAEMLFLDNNAISNFSDVNTHLVVSEFNTGKIISKRGEN 60

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
              + ++L   +  +++ + LK  K  L T + I+ + +     N        ++   ++
Sbjct: 61  KQVSVSNLPNHLALFLLTNDLKNDKISLDTKLKITNSDAILNKYN--------LSSSVSV 112

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           +  +    N+ + A+ E++ K     ++   +   ++ L+ T   +    +   + +TA+
Sbjct: 113 QDALFLLENEESNALLEAIFKKYDLTIKKAKDILSSMSLNDTTLASL--TIDEKNMSTAK 170

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           +M+ L+  I  ++P+     +   + +        N +         +  G   A+  +I
Sbjct: 171 NMSYLTNMILRNYPKLTEITKNPEVTLSSGSKATNNISFTESDKFRVL--GLNHANKNSI 228

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLS 286
             +     + LI ++    ++ T            F N + +  +         +N++
Sbjct: 229 TFAYSGDTKLLITILNQNDNKATYFDKLQKTYDYLFSNYSYKLALKAGSYKINNENIT 286


>gi|157956226|gb|ABW06482.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 263

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 67/260 (25%), Gaps = 26/260 (10%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPDHP 50
            +    + +L    P  +     +                 L++  +   ++     D  
Sbjct: 1   LMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY--RADER 58

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +  +L   + I K+        +      TM+L      
Sbjct: 59  FAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELSAA 118

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARD 169
            +  S N     +   +               +   L  T       +       T+ R 
Sbjct: 119 ALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRA 178

Query: 170 MAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           MA             D  +      +KG             A        G KTG     
Sbjct: 179 MAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTGSGGYG 234

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     D+  LI V 
Sbjct: 235 TTNDIAVIWPKDRAPLILVT 254


>gi|70906550|gb|AAZ14955.1| beta-lactamase CTX-M-43 [Acinetobacter baumannii]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGA--LDRNTRNKV----SASLLSMGF 264
            G KTG       N +A     +   L+ V        +  R +     +A +++ GF
Sbjct: 234 VGDKTGSGGYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAERRRDILAAAAKIVTHGF 291


>gi|1513032|dbj|BAA12695.1| beta-lactamase [Klebsiella oxytoca]
 gi|4775463|emb|CAB42614.1| beta-lactamase OXY-2a [Klebsiella oxytoca]
 gi|32130557|gb|AAL78280.2| K1 beta-lactamase [Klebsiella oxytoca]
          Length = 289

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDLEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      D        Q+            +  A        G KTG       
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVGDKTGAGDYGTT 244

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 245 NDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 289


>gi|187926013|ref|YP_001892358.1| Beta-lactamase [Ralstonia pickettii 12J]
 gi|241665500|ref|YP_002983859.1| beta-lactamase [Ralstonia pickettii 12D]
 gi|187727767|gb|ACD28931.1| Beta-lactamase [Ralstonia pickettii 12J]
 gi|240867527|gb|ACS65187.1| Beta-lactamase [Ralstonia pickettii 12D]
          Length = 275

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 55/211 (26%), Gaps = 2/211 (0%)

Query: 32  TLLDTNTGHV-IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  TG V + E   D    PAS  KL  A + F     K            +     
Sbjct: 29  IVADAATGTVVLHEGKCDERVTPASTFKLALAVMGFDHGFLKDEHTPVEHFRRGDPDWGG 88

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +       +     + +      +    A      + K     +    +  K+ G+  +
Sbjct: 89  EAWHQPIDPALWLQYSVVWYSQRITHAMGAQTFQAYVRKLGYGNMDVSGDPGKHNGMDRS 148

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              ++  +         R +      +     + +           G          G  
Sbjct: 149 WITSSLKISPQEQVDFMRRIVNRQLPVSAHTYEMVDRTVQTWQVPGGWAVQGKTGTAGPA 208

Query: 211 LGADGMKTGFTCASGFN-IVASAIQGDQSLI 240
            G       +  A  +   V  A +GD++ +
Sbjct: 209 PGNTSPDGTWDQAHAYGWFVGWAKKGDKTYV 239


>gi|329768498|ref|ZP_08259987.1| hypothetical protein HMPREF0428_01684 [Gemella haemolysans M341]
 gi|328836726|gb|EGF86381.1| hypothetical protein HMPREF0428_01684 [Gemella haemolysans M341]
          Length = 392

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 79/256 (30%), Gaps = 13/256 (5%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + + NTG +I++   +   +   L   +  Y++   LK  K  L + I I K + +   
Sbjct: 36  VVSELNTGKIISKRGENEKVSVGKLPNYLALYLLADNLKNNKITLDSKIDI-KTSDDILT 94

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
                   +       L+       N    +         K  +  M+     L     +
Sbjct: 95  KYKFESSITVKDAIFLLENEASNGLNQAIFSHFNIDITKAKDTLAAMSLNDTKLETFDNN 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      + +TA++++ L+  I   +P+     +     +   +          F 
Sbjct: 155 --------SSTNISTAKNISYLTSLILKTYPEITEITKNPEHTLATGE---KIKNSVEFK 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILG-ALDRNTRNKVSASLLSMGFYNKTDR 270
            ++  +      S  N V  A  G+  LI  +L  + D+    +         F N   +
Sbjct: 204 ESEKFRVLGLDYSEKNSVTYAYSGNTKLIITVLNQSDDKAAYFEKLQKSYDYLFTNYHYK 263

Query: 271 KKINYIIKDFYQQNLS 286
             +         + ++
Sbjct: 264 LALKAGTYTINNEKIT 279


>gi|298717495|ref|YP_003730137.1| beta-lactamase [Pantoea vagans C9-1]
 gi|298361684|gb|ADI78465.1| beta-lactamase [Pantoea vagans C9-1]
          Length = 292

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 4/211 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           ++DT  G        +  +   S +K+M    +    +    +L   I ISK+       
Sbjct: 51  VIDTADGSK-YAWRGNERFPLCSTSKVMAVAAILKKNERDPHLLDKKIHISKSDMVNYNP 109

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV--QHMNNTSKNLGLSAT 150
            +    GS M++       +  S N     +   L   ++     + + +    L     
Sbjct: 110 VTRKHIGSYMSVAELSAAALQYSDNAAMNKLLSYLGGPQQATHFARTIGDKDFRLDRHEP 169

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
               A    +    T +     L   +     +     ++           ++  A    
Sbjct: 170 GLNTAIPGDERDTTTPSAMAESLKKVVLGTALKEEQRAKLSDWMKGNTTGSDSIKAGLPD 229

Query: 211 LGADGMKTGF-TCASGFNIVASAIQGDQSLI 240
                 KTG     S  +I     +    +I
Sbjct: 230 DWIVADKTGSGDYGSTNDIAVIWPKNHAPVI 260


>gi|50096615|gb|AAT70415.1| CTX-M-37 extended-spectrum beta-lactamase [Enterobacter cloacae]
 gi|62005106|gb|AAX33264.2| CTX beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|309951213|emb|CBL80619.1| CTX-M-37 beta-lactamase [Kluyvera cryocrescens]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLHAQTADVQQKLAELEQQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|124021062|gb|ABM88811.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 290

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|66361080|pdb|1YLW|A Chain A, X-Ray Structure Of Ctx-M-16 Beta-Lactamase
          Length = 263

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 24  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 82  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 142 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 202 TSWTAGDKTGSGGYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|28881688|emb|CAD70280.1| class A beta-lactamase CTX-M-28 [Escherichia coli]
 gi|71273535|emb|CAJ13561.1| beta-lactamase [Escherichia coli]
 gi|151428368|gb|ABS12043.1| CTX-M beta-lactamase [Escherichia coli]
 gi|156145812|gb|ABU53682.1| CTX-M-15 beta-lactamase [Escherichia coli]
 gi|281335916|gb|ADA62515.1| CTX-M-28 beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|281336000|gb|ADA62557.1| CTX-M-29-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|227018498|gb|ACP18863.1| CTX-M beta-lactamase [Salmonella enterica subsp. enterica serovar
           Infantis]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|18390031|gb|AAL68824.1|AF462634_1 extended-spectrum beta-lactamase CTX-M-3 [Enterobacter cloacae]
          Length = 253

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 39  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 96

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 97  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 156

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 157 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 212

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 213 ASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVT 247


>gi|119946899|ref|YP_944579.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Psychromonas ingrahamii 37]
 gi|119865503|gb|ABM04980.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Psychromonas ingrahamii 37]
          Length = 480

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
          ++ L      +  N+      A            Y +LD     ++AE+  +    PASL
Sbjct: 3  KRILCFALFLLPVNLLADQWSALHALLPKGTQLSYLVLDPANNQLLAESNAEILRTPASL 62

Query: 57 TKLMTA 62
           KL+TA
Sbjct: 63 QKLLTA 68


>gi|78333|pir||S00464 beta-lactamase (EC 3.5.2.6) class A - Escherichia coli plasmid p453
          Length = 265

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 60/221 (27%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +  ++        F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLTAVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|315605199|ref|ZP_07880245.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313016|gb|EFU61087.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 446

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++D  TG V+ +     P  PAS TK +TA+   + L  
Sbjct: 81  VVDAQTGQVLLDAEASTPHTPASTTKTLTAFTALAHLDP 119


>gi|225028388|ref|ZP_03717580.1| hypothetical protein EUBHAL_02661 [Eubacterium hallii DSM 3353]
 gi|224954287|gb|EEG35496.1| hypothetical protein EUBHAL_02661 [Eubacterium hallii DSM 3353]
          Length = 135

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 3/97 (3%)

Query: 239 LIAVILGALDRNTRNKVSASLLSMGF---YNKTDRKKINYIIKDFYQQNLSNEVPNISEE 295
           LIAV++       R K  ASLL  GF      TD++         +            + 
Sbjct: 3   LIAVVMACQSSKERVKDCASLLDYGFSLCKIYTDKQPPALSTVPVHNGTKEFISCKYKKN 62

Query: 296 VCTTQKEIINYNTQMKEAKDKESHFIDFEKITLLKNK 332
                   IN N   K+   +++     +K  ++   
Sbjct: 63  FSYVFTSEINQNNIQKKVVFQKNLSAPIKKNQVIGRL 99


>gi|171188398|gb|ACB41777.1| extended spectrum beta-lactamase CTX-M-82 [Escherichia coli]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTELTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|157812672|gb|ABV81082.1| extended-spectrum beta-lactamase CTX-M-68 [Klebsiella sp.
           ARS06-441]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +RQF ++    +   +      A+T  +                  L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLHAQTVDVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +                   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDDTFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|30908726|gb|AAP35005.1| extended-spectrum beta-lactamase SHV-12 [Serratia liquefaciens]
          Length = 286

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/265 (11%), Positives = 64/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   ++    + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLLFISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A        +   
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTHYPG 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
           +     +        +         ++   +       +V         KTG        
Sbjct: 181 QHGRDPAQAADQPASERPFATAAAAVDGGRRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|254966778|gb|ACT97392.1| CTX-M-15 beta-lactamase [mixed culture bacterium AX_gF1DD01_14]
 gi|322227641|gb|ADW95285.1| extended spectrum beta lactamase CTX-M-15 [Enterobacter sp. 247
           BMC]
          Length = 288

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|157956222|gb|ABW06480.1| extended-spectrum beta-lactamase CTX-M-15 [Klebsiella pneumoniae]
          Length = 240

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 26  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 83

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 84  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 143

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 144 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 199

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 200 ASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVT 234


>gi|6225089|sp|P81781|BLC6_VIBCH RecName: Full=Beta-lactamase CARB-6; AltName: Full=Carbenicillinase
           6; Flags: Precursor
 gi|4377728|gb|AAD19217.1| class A beta-lactamase [Vibrio cholerae]
          Length = 288

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 78/254 (30%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +           +++   +  +   N   +V     +   ++G       +I
Sbjct: 181 IASTLNQLLFGSTLSEASQKKLESWMVNNQVTGNLLRSVLPVKWSIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A     ++  I V
Sbjct: 241 TAIVWSEEKKTIIV 254


>gi|166364611|ref|YP_001656884.1| putative beta-lactamase protein [Microcystis aeruginosa NIES-843]
 gi|166086984|dbj|BAG01692.1| putative beta-lactamase protein [Microcystis aeruginosa NIES-843]
          Length = 393

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 78/278 (28%), Gaps = 14/278 (5%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           ++   +          +      +D + G   A    D  +  AS  K+      F  + 
Sbjct: 110 SLNQKLQALAVKYPKLQA-GALFIDLDNGA-YANFRGDTIFAAASTIKIPILVAFFEDVD 167

Query: 71  EKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
             K  L  P+  +K+                T T       + V S N     +      
Sbjct: 168 AGKIRLDEPLVATKDVLASGSGDMQYLGVNKTYTALETATKMNVISDNTATNMLI----- 222

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
                 + +N   +  GL++T   NA   ++  + T+ RD+  +  ++       +    
Sbjct: 223 KRMGGKEALNQRFQAWGLTSTVINNALPDLEGTNTTSPRDLVTILGKVNQGELLSLRSRD 282

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
                ++  +                 KTG   +   +     +   +  +  ++  + R
Sbjct: 283 RLLNIMQETRTRTLLPQGIEKSADIAHKTGDIGSMLADAGIIDMPNGKRYLGAVM--VKR 340

Query: 250 NTRNKVSASLLSM----GFYNKTDRKKINYIIKDFYQQ 283
              +  + +L+       + +    +           Q
Sbjct: 341 PHNDSNARTLIQQISRTAYQHFKWYQTQPAAKPQPVAQ 378


>gi|46309198|emb|CAG25822.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 93  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGLNNKAER 241


>gi|325560584|gb|ADZ31262.1| beta-lactamase CTX-M-106 [Escherichia coli]
          Length = 290

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 73/282 (25%), Gaps = 24/282 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G +TG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDRTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
           +A      +  L+ V         A  R+     +A +++ G
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRHDVLASAARIIAEG 290


>gi|195975933|gb|ABW86620.2| beta-lactamase blaCTX-M [Klebsiella pneumoniae]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +RQF ++    +   +      A+T  +                  L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTVDVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|7649306|gb|AAF65843.1| cefotaxime-hydrolyzing beta-lactamase [Escherichia coli]
 gi|49823169|gb|AAT68658.1| CTX-M-10 [Klebsiella pneumoniae]
          Length = 291

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +RQF ++    +   +      A+T  +                  L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTVDVQQKLAELEQQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|99082099|ref|YP_614253.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Ruegeria sp. TM1040]
 gi|99038379|gb|ABF64991.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Ruegeria sp. TM1040]
          Length = 494

 Score = 47.7 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            + +  TG V+     D    PAS+ K++TA      L    
Sbjct: 62  VVANARTGQVLESVEGDALLPPASVAKVLTALYALDSLGAGY 103


>gi|273161397|gb|ACZ97625.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 262

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 66/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +                +D  +G  +     D  +   S 
Sbjct: 1   IISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 61  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 120

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 121 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 181 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------AGE 228

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 229 RGARGIVALLGPNNKAER 246


>gi|273161391|gb|ACZ97623.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 258

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 66/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +                +D  +G  +     D  +   S 
Sbjct: 2   IISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 62  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 121

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 122 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 182 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------AGE 229

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 230 RGARGIVALLGPNNKAER 247


>gi|255045865|gb|ACU00091.1| SHV-28 beta-lactamase [Klebsiella pneumoniae]
          Length = 260

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 66/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +                +D  +G  +     D  +   S 
Sbjct: 2   IISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 62  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 121

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 122 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG            A +
Sbjct: 182 KLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG------------AGE 229

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG  ++  R
Sbjct: 230 RGARGIVALLGPNNKAER 247


>gi|123217689|gb|ABM73648.1| KLUC-2 [Enterobacter cloacae]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 71/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP---YYT-----------LLDTNTG-HVIAEN 45
           +RQF ++ A             A+T  +                  L+DT  G  ++   
Sbjct: 6   LRQFALLAATVFPLLAGSVSLQAQTLSVEQKLAALEQRSGGRLGVALIDTADGSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   I I K         +    G +M+L 
Sbjct: 64  RGDERFAMCSTSKVMAAAAVLKQSESQHDLLNQRIEIKKGDLTNYNPIAEKHVGRSMSLS 123

Query: 106 NALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +       +    F + + + +  L  +      A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAQLGGPQGVTAFARKIGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDAQRAQLVTWMKGNTTGTASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  L+ V 
Sbjct: 244 GTTNDIAVIWPKDRAPLVLVT 264


>gi|56159738|gb|AAV80715.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 70/274 (25%), Gaps = 17/274 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +  +              Y  +D  +G  +A      
Sbjct: 1   MRYIRLCLISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPLMSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNTAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   + T         Q+    +  +       AV         KTG        
Sbjct: 181 SMATTLRKLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRG 240

Query: 228 IVASAIQGDQ--SLIAVILG--ALDRNTRNKVSA 257
           IVA      +   ++ + L   A     RN+  A
Sbjct: 241 IVALLGPDGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|318062781|ref|ZP_07981502.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. SA3_actG]
          Length = 440

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 4/164 (2%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A+   + P L++ E  K P  +++D  +G  +  N+      PAS+TK+ TA      L 
Sbjct: 33  ALAGRLDPLLAVDELGKGPSASVVDLTSGEQVYGNHAARAATPASVTKIATAVAALDALG 92

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
               + T               + T    +      +L+ L  ++A  +           
Sbjct: 93  PDHRIRTRVEKDGHRLVLVGGGDPTLTARAHPGEYASLRTLARRTAEALGTEHGTYTLVY 152

Query: 131 EKKFVQHMNNT----SKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +              ++NL        +   +    H   AR  
Sbjct: 153 DTSRYAGTTRHPIGPNENLAPVTPLIADEGRLDSSDHGPAARGT 196


>gi|261212257|ref|ZP_05926543.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC341]
 gi|260838865|gb|EEX65516.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC341]
          Length = 481

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTA 62
          FL+ +  A     F   +        Y  L+ D  +   I +      + PAS  K++TA
Sbjct: 15 FLLFLPSAHAETQFSSATNKLPVGSRYALLIEDIGSKQTILDLNTHLYYPPASTQKILTA 74

Query: 63 YVV 65
             
Sbjct: 75 LAA 77


>gi|166850618|gb|ABY91281.1| extended-spectrum beta-lactamase CTX-M-69 [Escherichia coli]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 79/292 (27%), Gaps = 34/292 (11%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                  N +A     D+  LI V         A  R      +A +++ G 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVTYFTQPQPNAESRRDVLASAAKIVTNGL 291


>gi|282866366|ref|ZP_06275411.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. ACTE]
 gi|282558762|gb|EFB64319.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. ACTE]
          Length = 494

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+ + + P L       +    ++DT TG  +  +    P  PAS  K+ T+    S 
Sbjct: 116 ALDTVLTPLLKAPGLGTVSAAAVVDTATGEQVYAHGATTPMTPASTVKIATSVAALSA 173


>gi|259014680|gb|ACV88640.1| beta-lactamase CTX-M15 [Escherichia coli]
          Length = 249

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 40  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 97

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 98  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 157

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 158 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 213

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 214 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 248


>gi|259014678|gb|ACV88639.1| beta-lactamase CTX-M15 [Escherichia coli]
          Length = 248

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 40  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 97

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 98  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 157

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 158 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 213

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 214 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 248


>gi|157956230|gb|ABW06484.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 248

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 37  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 94

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 95  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 154

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 155 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 210

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 211 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 245


>gi|157956224|gb|ABW06481.1| extended-spectrum beta-lactamase CTX-M-15 [Klebsiella pneumoniae]
          Length = 248

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 34  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 91

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 92  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 151

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 152 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 207

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 208 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 242


>gi|157956214|gb|ABW06476.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 267

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 45  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 102

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 103 KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 162

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 163 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 218

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 219 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 253


>gi|157956208|gb|ABW06473.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 251

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 37  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 94

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 95  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 154

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 155 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 210

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 211 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 245


>gi|19571743|emb|CAD20588.3| beta-lactamase class A [Kluyvera ascorbata]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWG 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPANHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|307544033|ref|YP_003896512.1| beta-lactamase [Halomonas elongata DSM 2581]
 gi|307216057|emb|CBV41327.1| beta-lactamase [Halomonas elongata DSM 2581]
          Length = 350

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 63/213 (29%), Gaps = 5/213 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + DT +G     +  D  +  AS  K++    +   +   +  L   +   ++       
Sbjct: 107 VTDTGSGR-HWGHREDERFPMASTFKVLACAALLDRVDAGQEELQRRVIYEQDDLVTYSP 165

Query: 93  NSTFKKGST-MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSA 149
            +    G   MTL +  +  +  S N  A  + +++        F + + +    L    
Sbjct: 166 VTKEHVGEPGMTLGSLCEAAMGYSDNSAANMVLKAIGGPSAVTDFTRSLGDDMTRLDRWE 225

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T    A         T A   A L      D        ++    +  +       A   
Sbjct: 226 TKLNEAIPGDPRDTTTPAAMAADLQALFLGDRLSEESRERLTDWFLGNRTGDARLRAGLP 285

Query: 210 FLGADGMKTGFTCASGFNIVASAI-QGDQSLIA 241
                G +TG       N VA A     + +I 
Sbjct: 286 DDWRIGDRTGSGAHGSTNNVAVAWPSDGEPVII 318


>gi|308235340|ref|ZP_07666077.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Gardnerella vaginalis ATCC 14018]
 gi|311114322|ref|YP_003985543.1| D-Ala-D-Ala carboxypeptidase 3 (S13) domain-containing protein
           [Gardnerella vaginalis ATCC 14019]
 gi|310945816|gb|ADP38520.1| D-Ala-D-Ala carboxypeptidase 3 (S13) domain protein [Gardnerella
           vaginalis ATCC 14019]
          Length = 594

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
              + D N G +IA    +    PAS  K +TA      L   
Sbjct: 174 SAVIADAN-GKIIAAKNENLALQPASTMKTLTALAASHVLDMG 215


>gi|68012688|gb|AAY84742.1| extended-spectrum beta-lactamase CTX-M-42 [Escherichia coli]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTETTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|160948451|emb|CAJ47133.2| beta-lactamase [Klebsiella pneumoniae]
 gi|225697595|gb|ACO07070.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 66/265 (24%), Gaps = 25/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +   +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASSRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +            F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 181 SMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 232

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 233 ----AGERGARGIVALLGPNNKAER 253


>gi|157956216|gb|ABW06477.1| extended-spectrum beta-lactamase CTX-M-15 [Enterobacter gergoviae]
          Length = 242

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 57/214 (26%), Gaps = 13/214 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 35  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 92

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 93  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 152

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 153 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 208

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAV 242
                G KTG       N +A     D+  LI V
Sbjct: 209 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILV 242


>gi|157956210|gb|ABW06474.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 244

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 57/214 (26%), Gaps = 13/214 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 37  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 94

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 95  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 154

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 155 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 210

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAV 242
                G KTG       N +A     D+  LI V
Sbjct: 211 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILV 244


>gi|332664615|ref|YP_004447403.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332333429|gb|AEE50530.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 448

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 42/161 (26%), Gaps = 16/161 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKL---------------PYYTLLDTNTGHVIAENYPD 48
           F ++ A+ +  NIF         +                  + L D N    + +   D
Sbjct: 11  FFLLFALCLPLNIFGQALTKIQQQALDKLVLQSPIFARHFYGFALYDPNGKLTLFQKDAD 70

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             + PAS TK+ T Y     LK+   +L      +    +   +                
Sbjct: 71  KFFTPASNTKIFTLYTALKVLKDSLPVLRYTKEGAFTIFQGMGNPMFLHPLFAQDSVAWN 130

Query: 109 KLLIVKSA-NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
            L   K      A    +        +    ++     G  
Sbjct: 131 FLNQEKGYLAFSASNFKDERFGNGWAWNDFRDDYQAEKGSF 171


>gi|82655100|emb|CAJ19619.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 69/267 (25%), Gaps = 13/267 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NTAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPANMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILG--ALDRNTRNKVSA 257
             +   ++ + L   A     RN+  A
Sbjct: 248 DGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|10946252|gb|AAG24824.1|AF286192_2 beta-lactamase CTX-M-5 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|2443465|gb|AAC32890.1| beta-lactamase CTX-M-5 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|6580517|emb|CAB63259.1| class A beta-lactamase KLUA-2 [Kluyvera ascorbata]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWG 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPANHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|157956228|gb|ABW06483.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 240

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 85  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 144

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 145 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 200

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 201 ASWVVGDKTGSGGYGTTNDIAVIWPKDRAPLILVT 235


>gi|329769995|ref|ZP_08261391.1| hypothetical protein HMPREF0433_01155 [Gemella sanguinis M325]
 gi|328837513|gb|EGF87141.1| hypothetical protein HMPREF0433_01155 [Gemella sanguinis M325]
          Length = 399

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 99/303 (32%), Gaps = 34/303 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN-----------KLPYYTLL-DTNTGHVIAENYPD 48
           MR   + I +  ++ +FP L+ A+                   ++ + NTG +I++   +
Sbjct: 1   MRFKKISILVMAVAFLFPNLAKADDVFLDNNAISEFSDANSSIVISEYNTGKIISKRGEN 60

Query: 49  HPWNPASLTKL---MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                 S+ KL   +  Y++   LK KK  L   ITI+K          T +      + 
Sbjct: 61  EKV---SVNKLPNYLALYLLTDDLKNKKTSLDDKITINKGDDVLSKYQITKELTVKDAIF 117

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HY 164
                        I             K+   +   +  LG  + +      +     + 
Sbjct: 118 LLENENSSSLLEAI-----------FTKYNVDVEKANSILGAMSLNNTKLENLENSDSNT 166

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           ++A+D+  L+  I  ++P+     +     +   +    +            +      S
Sbjct: 167 SSAKDITFLNSVILKNYPELTEITKNPEYTLSSDEKVTNSVTFKESE---KFRVLGLDYS 223

Query: 225 GFNIVASAIQGDQSLIAVILG-ALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQ 283
           G N V  A  G+  L+  +L  + D++   +         F N   +  +         +
Sbjct: 224 GKNSVTYAYSGNTKLLVTVLNQSDDKDKFFEKLQKTYEYLFSNYQYKLALKAGTYTINNE 283

Query: 284 NLS 286
           N+S
Sbjct: 284 NIS 286


>gi|297192942|ref|ZP_06910340.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297151569|gb|EDY66561.2| D-alanyl-D-alanine carboxypeptidase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 459

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           +   + P L+ +     P   ++D  TG  +     + P  PAS  K+
Sbjct: 78  LARTLGPLLADSGLGPAPAVCVIDLTTGERLYGKRAEAPMVPASTVKI 125


>gi|294793404|ref|ZP_06758549.1| putative beta-lactamase [Veillonella sp. 6_1_27]
 gi|294795223|ref|ZP_06760357.1| putative beta-lactamase [Veillonella sp. 3_1_44]
 gi|294454015|gb|EFG22390.1| putative beta-lactamase [Veillonella sp. 3_1_44]
 gi|294455835|gb|EFG24200.1| putative beta-lactamase [Veillonella sp. 6_1_27]
          Length = 272

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 73/239 (30%), Gaps = 12/239 (5%)

Query: 23  AETNKLPYYTLL--DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           A    + Y  L   D     +IA    +   + ASL K++    VF   + ++  +   +
Sbjct: 22  APAGNISYAVLQFDDEEEPTLIAARGENTVHSSASLIKVLIMEYVFHLARTEQLDINDTV 81

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +S+              G        L  L++  +++IA  +  ++       ++++N 
Sbjct: 82  PLSRTPRVEGGGALQELVGKHSFTYLELCRLMMVLSDNIATNLLITVL-----GMENINA 136

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS----WRIKTDFPQYMHYFQIKGLEIK 196
            ++ LG+                      +  +S    ++   +      Y +     + 
Sbjct: 137 RAEKLGMDEMELNRMMMDFNALAEGRDNHITAMSLARLYKHIFECRDRDAYGREMWNILG 196

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
            +++ +              KTG       +              ++L +   N R K 
Sbjct: 197 RQQFRDILPFYWGEGIRFHHKTGSLDRVEHDGGVIETFRGH-FCFILLMSDIDNDRGKE 254


>gi|94502802|gb|ABF29628.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 245

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 59/215 (27%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 19  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 78

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 79  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 138

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 139 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 198

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG +      IVA     ++   ++ + L
Sbjct: 199 WFIADKTGASERGARGIVALLGPNNKAERIVVIYL 233


>gi|94502809|gb|ABF29632.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 244

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 59/215 (27%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 18  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 77

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 78  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 137

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 138 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 197

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG +      IVA     ++   ++ + L
Sbjct: 198 WFIADKTGASERGARGIVALLGPNNKAERIVVIYL 232


>gi|30749600|pdb|1N9B|A Chain A, Ultrahigh Resolution Structure Of A Class A
           Beta-Lactamase: On The Mechanism And Specificity Of The
           Extended-Spectrum Shv-2 Enzyme
          Length = 265

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 59/215 (27%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG +      IVA     ++   ++ + L
Sbjct: 204 WFIADKTGASERGARGIVALLGPNNKAERIVVIYL 238


>gi|219920903|emb|CAQ76629.1| beta-lactamase [Klebsiella oxytoca]
          Length = 269

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 71/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDLEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      D        Q+            +  A        G KTG       
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVGDKTGAGDYGTT 244

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     D   L+ V 
Sbjct: 245 NDIAVIWPEDHAPLVLVT 262


>gi|90019041|gb|ABC18328.3| extended-spectrum beta-lactamase CTX-M-54 [Klebsiella pneumoniae]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  +      A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEQTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|300312887|ref|YP_003776979.1| oxacillin hydrolase (class-D beta-lactamase) signal peptide protein
           [Herbaspirillum seropedicae SmR1]
 gi|300075672|gb|ADJ65071.1| oxacillin hydrolase (class-D beta-lactamase) signal peptide protein
           [Herbaspirillum seropedicae SmR1]
          Length = 272

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 61/241 (25%), Gaps = 9/241 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDT-NTGHVIAENYPDHPWNPASLTKL 59
           MR+   + A  +   I    + A T       + D    G ++        + PAS  K+
Sbjct: 1   MRK-TRMFAALIAGGIISTAASARTICT---IVADASENGSIVQSGDCTSRFTPASTFKI 56

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
             + + F     +           +       +       S     + +      +    
Sbjct: 57  AISLMGFDAGVLQDEHTPAWPYQPEYPDWGGAAWRQPTDASRWIQYSVVWFSQRVAQQLG 116

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
           A                      K  G       ++  +        A    +++ ++  
Sbjct: 117 ATRFQRYTRDFRYGNQDVSGEPGKRNGTKGAWINSSLRISPLEQI--AFLRRLVNRQLPV 174

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +   Y    +I  +      +           G+DG             V  AI+ D+ L
Sbjct: 175 NARAYEMTGRITRITAAPDGWEIHGKTGTGSPGSDGRYDPAHAYGW--FVGWAIKDDRKL 232

Query: 240 I 240
           +
Sbjct: 233 V 233


>gi|110590178|pdb|2G2W|A Chain A, Crystal Structure Of The Shv D104k Beta-LactamaseBETA-
           Lactamase Inhibitor Protein (Blip) Complex
          Length = 265

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVKYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|219920963|emb|CAQ76659.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920981|emb|CAQ76668.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920995|emb|CAQ76675.1| beta-lactamase [Klebsiella oxytoca]
          Length = 273

 Score = 47.3 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 71/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDLEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      D        Q+            +  A        G KTG       
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVGDKTGAGDYGTT 244

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     D   L+ V 
Sbjct: 245 NDIAVIWPEDHAPLVLVT 262


>gi|213026275|ref|ZP_03340722.1| D-alanyl-D-alanine carboxypeptidase fraction C [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 76

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA-VGTFLGADGMKTGFTCAS 224
           TARDMA+L   +  D P      + K       + PN N     T L  DGMKTG T  +
Sbjct: 1   TARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQPNRNRLLWSTNLHVDGMKTGTTAGA 60

Query: 225 GFNIVASAIQGDQSL 239
           G+N+VASA QGD  L
Sbjct: 61  GYNLVASATQGDMRL 75


>gi|6979152|gb|AAF34335.1| beta-lactamase SHV-2 variant [Klebsiella pneumoniae]
          Length = 260

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 59/215 (27%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGEFCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEAFPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG +      IVA     ++   ++ + L
Sbjct: 215 WFIADKTGASERGARGIVALLGPNNKAERIVVIYL 249


>gi|82655078|emb|CAJ19607.1| OKP-A beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 71/269 (26%), Gaps = 13/269 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +  +          Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K +    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKALLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A   A L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAATLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTSHALSDRSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILGAL--DRNTRNKVSASL 259
             +   ++ + L         RN+  A +
Sbjct: 248 NGKAERIVVIYLRDTPATMAERNQQIAKI 276


>gi|66361078|pdb|1YLP|A Chain A, Atomic Resolution Structure Of Ctx-M-27 Beta-Lactamase
          Length = 263

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 65/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 24  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKHADLVNYN 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 82  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 142 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 202 TSWTVGDKTGSGGYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|85708858|ref|ZP_01039924.1| Putative beta-lactamase [Erythrobacter sp. NAP1]
 gi|85690392|gb|EAQ30395.1| Putative beta-lactamase [Erythrobacter sp. NAP1]
          Length = 374

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
           + D  TG  + E   D      S+TKL  A    S + +    LT  + I ++
Sbjct: 75  VQDVETGE-LYEFNGDELLPQQSVTKLWVAMAALSQVDQGDLNLTERVRIGRD 126


>gi|302535222|ref|ZP_07287564.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. C]
 gi|302444117|gb|EFL15933.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sp. C]
          Length = 484

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
                    +++D  TG V+ E+    P  PAS  K+
Sbjct: 110 PALGTARGASVIDVATGQVLYESGAGDPMTPASTIKI 146


>gi|281335906|gb|ADA62510.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|27372230|dbj|BAC53608.1| b-lactamase FEC-1 [Escherichia coli]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 114 KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 173

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 174 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 229

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 230 ASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|329963720|ref|ZP_08301166.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides fluxus YIT 12057]
 gi|328527730|gb|EGF54722.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides fluxus YIT 12057]
          Length = 482

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 23/87 (26%), Gaps = 21/87 (24%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK--------------------LPYYT-LLDTNTG 39
          M++ L+ + +++        +    +                           + D   G
Sbjct: 1  MKRILLQLFLSVCLLSLSARNADNADNRTGTLSSRLDTLIKYQLPSGSNVAISVYDLTAG 60

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVF 66
            +     D    PAS  KL+T     
Sbjct: 61 KPLYSYQADKLSRPASTMKLLTTITAL 87


>gi|283784953|ref|YP_003364818.1| Beta-lactamase [Citrobacter rodentium ICC168]
 gi|282948407|emb|CBG87995.1| Beta-lactamase [Citrobacter rodentium ICC168]
          Length = 295

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 66/237 (27%), Gaps = 11/237 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + + A+L   I I K         + 
Sbjct: 60  ADNSQLLY--RGDERFAMCSTSKVMVAAAVLKQSETRPAILQQKIPIKKADLTNWNPVTE 117

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
              G  MTL       +  S N     +   L    K   F +   +T+  L        
Sbjct: 118 KYVGKEMTLAELSAATLQYSDNTAMNKLIAHLGGPGKVTAFARSTGDTTFRLDRQEPELN 177

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    +       L      D        Q+            +  A       
Sbjct: 178 TAIPGDERDTSSPRAMADSLRNLTLGDALADTQRAQLVAWLKGNTTGGQSIRAGVPAHWV 237

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
            G KTG       N +A     ++  LI V         A  R      +A +++ G
Sbjct: 238 VGDKTGAGEYGTTNDIAIIWPENRPPLILVTYFTQRQQDAKWRKDVLAAAAKIVTEG 294


>gi|281335926|gb|ADA62520.1| CTX-M-62-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|255524822|ref|ZP_05391772.1| beta-lactamase [Clostridium carboxidivorans P7]
 gi|296188641|ref|ZP_06857029.1| hypothetical protein CLCAR_4177 [Clostridium carboxidivorans P7]
 gi|255511489|gb|EET87779.1| beta-lactamase [Clostridium carboxidivorans P7]
 gi|296046905|gb|EFG86351.1| hypothetical protein CLCAR_4177 [Clostridium carboxidivorans P7]
          Length = 259

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 57/200 (28%), Gaps = 3/200 (1%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                   AS+ KL      F+  K  K  L   I I  +        S        ++ 
Sbjct: 33  NTHEVVPSASIIKLFIMSEAFNKNKMGKLNLHEIIKIDNDKKVPFSIVSLLNSVEQYSVK 92

Query: 106 NALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
           + + L+I++S N     + +         F++     +  LG     F  A       +Y
Sbjct: 93  DLITLMIIQSDNTATNVLIDFLGIDNINNFIKERGFKNTVLGRKMMDFEGAKAGKD--NY 150

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T+A D+     ++           ++    +  +   +              KTG     
Sbjct: 151 TSAYDVFSFLEKLYNHNLVGEEEDKLMIDILSHQLDFSMMRMDMLDDLKIAHKTGDLNCL 210

Query: 225 GFNIVASAIQGDQSLIAVIL 244
             +      +     I V+ 
Sbjct: 211 KHDAGIVYSEKVGDYIFVMF 230


>gi|146771515|gb|ABQ45409.1| extended-spectrum beta-lactamase CTX-M-66 [Proteus mirabilis]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 13/215 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 114 KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 173

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 174 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 229

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A     D+  LI V 
Sbjct: 230 ASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|66932799|gb|AAY58237.1| extended-spectrum beta-lactamase CTX-M-13 [Escherichia coli]
          Length = 283

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 65/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LDT-NTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +DT +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTKDNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|58119473|gb|AAW65394.1| extended-spectrum beta-lactamase CTX-M-13 [Proteus mirabilis]
          Length = 278

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 65/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LDT-NTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +DT +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTKDNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|18656800|gb|AAL77985.1| extended-spectrum beta-lactamase CTX-M-13 [Enterobacter cloacae]
          Length = 264

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 65/256 (25%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LDT-NTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +DT +   V+     D  
Sbjct: 6   FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTKDNTQVLY--RGDER 63

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 64  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 123

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 124 ALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 183

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 184 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 243

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 244 IAVIWPQGRAPLVLVT 259


>gi|17127727|gb|AAK08976.1| extended-spectrum beta-lactamase [Kluyvera cryocrescens]
          Length = 291

 Score = 47.3 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 71/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP---YYT-----------LLDTNTG-HVIAEN 45
           +RQF ++ A             A+T  +                  L+DT  G  ++   
Sbjct: 6   LRQFALLAATVFPLLAGSVSLQAQTLSVEQKLAALEQRSGGRLGVALIDTADGSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   I I K         +    G +M+L 
Sbjct: 64  RGDERFAMCSTSKVMAAAAVLKQSESQHDLLNQRIEIKKGDLTNYNPIAEKHVGGSMSLS 123

Query: 106 NALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +       +    F + + + +  L  +      A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAQLGGPQGVTAFARKIGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDAQRAQLVTWMKGNTTGTASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  L+ V 
Sbjct: 244 GTTNDIAVIWPKDRAPLVLVT 264


>gi|281335972|gb|ADA62543.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|259120754|gb|ACV92002.1| extended spectrum beta-lactamase CTX-M-71 [Klebsiella pneumoniae]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 -FTCASGFNIVASAIQGDQSLIAVI 243
                +  +I     +    LI V 
Sbjct: 240 SCGYGTTNDIAVIWPKDRAPLILVT 264


>gi|56463237|gb|AAV91760.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    + + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAMLARVDAGDEQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 200 WFIADKTG------------ASKRGARGIVALLGPNNKAER 228


>gi|333025317|ref|ZP_08453381.1| hypothetical protein STTU_2821 [Streptomyces sp. Tu6071]
 gi|332745169|gb|EGJ75610.1| hypothetical protein STTU_2821 [Streptomyces sp. Tu6071]
          Length = 541

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+   + P L++ E  K P  +++D  +G  +  N+      PAS+TK+ TA      
Sbjct: 122 ALAGRLDPLLAVDELGKGPSASVVDLTSGEQVYGNHAARAATPASVTKIATAVAALDA 179


>gi|281335950|gb|ADA62532.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281335946|gb|ADA62530.1| CTX-M-36-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|78184292|ref|YP_376727.1| beta-lactamase family protein [Synechococcus sp. CC9902]
 gi|78168586|gb|ABB25683.1| possible beta-lactamase family protein [Synechococcus sp. CC9902]
          Length = 388

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 27/259 (10%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     ++  Y L+  + G   A+ + + P   AS  K      V   + +       
Sbjct: 119 QAATQPDLQVSAYMLI-LDDGRF-AQMHANRPMPAASSIKTPILLAVLERIDQGTLQWNE 176

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+T++K            +   T      +   +++ +++ A  +  +    +       
Sbjct: 177 PLTLTKELVGGGAGWMASRPLGTRFPTYEVATEMIRVSDNSATNLMIARAGGQDAINARF 236

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK-GLEIKG 197
                         +  + +       T     +       D  + +         E+  
Sbjct: 237 QALDL------PATVVNNWLPDLDGTNTTSARDLSRAIALVDSGESLAPRSRDLFREVMA 290

Query: 198 KKYPNTNWAVGTFLGADG-----------------MKTGFTCASGFNIVASAIQGDQSLI 240
               NT    G   G  G                  KTG    +  +     +   +  +
Sbjct: 291 TSVTNTLLPTGLMRGLGGAQGAPDSALARKGYRVFNKTGDIGTAYADAGLIELPDGRRAV 350

Query: 241 AVIL-GALDRNTRNKVSAS 258
           A  L      + R+     
Sbjct: 351 AGFLVKGPFNDPRSTEMIR 369


>gi|169839591|ref|ZP_02872779.1| Serine-type D-Ala-D-Ala carboxypeptidase [candidate division TM7
           single-cell isolate TM7a]
          Length = 61

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             +TN  +G   G DG+KTG+  A+G NIV +A +GD  +IAVILG+     RN + A 
Sbjct: 1   MTSTNTLLGNVQGVDGLKTGYHDAAGSNIVLTANRGDDRMIAVILGSNHAKDRNAIGAR 59


>gi|281336004|gb|ADA62559.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|56966062|pdb|1TDG|A Chain A, Complex Of S130g Shv-1 Beta-Lactamase With Tazobactam
 gi|56966063|pdb|1TDL|A Chain A, Structure Of Ser130gly Shv-1 Beta-Lactamase
          Length = 265

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 57/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I    N  A  +            F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMGDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|153819584|ref|ZP_01972251.1| penicillin-binding protein 6 [Vibrio cholerae NCTC 8457]
 gi|126509866|gb|EAZ72460.1| penicillin-binding protein 6 [Vibrio cholerae NCTC 8457]
          Length = 127

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 22/86 (25%), Gaps = 3/86 (3%)

Query: 250 NTRNKVSASLLSMGFYNKTDRKKINY---IIKDFYQQNLSNEVPNISEEVCTTQKEIINY 306
            +R   S  LLS GF              I          NEV   S +         + 
Sbjct: 1   ESREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNEVALGSADTVYLTLPRSDV 60

Query: 307 NTQMKEAKDKESHFIDFEKITLLKNK 332
                  +  ++      K  ++ + 
Sbjct: 61  KKLNAVIQLDQNLEAPIAKGDVVGSI 86


>gi|46277640|gb|AAS87022.1| beta-lactamase PLA-3 [Raoultella planticola]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 71/232 (30%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A    D  +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLAGYRSDERFPMMSTFKVLLCGAVLSRVDAGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLTDGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTSFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +V    
Sbjct: 165 LNEARPGDVRDTTTPQAMARTLRNLLTGRVLSSASQQQLQRWMVEDKVAGPLLRSVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L       + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTGPPATMDERNKQIAAI 276


>gi|281335932|gb|ADA62523.1| CTX-M-62-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|144954337|gb|ABP04245.1| CTX-M-62 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|281335924|gb|ADA62519.1| CTX-M-62 beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281335940|gb|ADA62527.1| CTX-M-62-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281336010|gb|ADA62562.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281335900|gb|ADA62507.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|323710406|gb|ADY02604.1| beta-lactamase blaSHV [Shigella sonnei]
          Length = 239

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 31  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 90

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 91  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 150

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 151 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 210

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 211 WFIADKTG------------AGERGARGIVALLGPNNKAER 239


>gi|323710378|gb|ADY02590.1| beta-lactamase SHV [Shigella dysenteriae 2a]
          Length = 239

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 31  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 90

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 91  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 150

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 151 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 210

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 211 WFIADKTG------------AGERGARGIVALLGPNNKAER 239


>gi|273161409|gb|ACZ97629.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 257

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 215 WFIADKTG------------AGERGARGIVALLGPNNKAER 243


>gi|273161394|gb|ACZ97624.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 249

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 27  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 86

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 87  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 146

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 147 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 206

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 207 WFIADKTG------------AGERGARGIVALLGPNNKAER 235


>gi|218091985|emb|CAP58289.1| beta-lactamase [Klebsiella pneumoniae]
 gi|223635895|emb|CAQ03505.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 299

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 58  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 117

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 118 SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 177

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 178 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 237

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 238 WFIADKTG------------AGERGARGIVALLGPNNKAER 266


>gi|197335653|ref|YP_002155898.1| beta-lactamase [Vibrio fischeri MJ11]
 gi|197317143|gb|ACH66590.1| beta-lactamase [Vibrio fischeri MJ11]
          Length = 283

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 70/252 (27%), Gaps = 11/252 (4%)

Query: 1   MRQFLVIIAMAMLSN-----IFPFLSIAETNKLPYYT---LLDTNTGHVIAENYPDHPWN 52
           M+    +  + +L+N            A       Y    +L+T T    A    D  + 
Sbjct: 1   MKIKPFLFGLIVLANNAIAGSLTQNIEAIELSSGGYIGVSVLNTETNKTWAYK-GDQRFP 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K +    +               +I+K         +    G+ +T   A +  +
Sbjct: 60  MMSTFKTLACAKMLYDSSVGGIDKYKTTSITKEQIMPWSPVTEPLIGNMITTQKACEATM 119

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + S N  A  +   +       +F++ M +T   L         +    +    T     
Sbjct: 120 LMSDNTAANIVLNEIGGPSSLTQFLRAMGDTKTRLDRIEPELNESKNGDKRDTTTPVAMS 179

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L+  +  +         +K   +  K       ++     +   ++G        I A
Sbjct: 180 QTLNALLFGNTLNPQDEQTLKSWMMNNKVSDPLLRSILPNDWSIADRSGAGGFGSRGITA 239

Query: 231 SAIQGDQSLIAV 242
           +        I +
Sbjct: 240 AIWNDKHQPIII 251


>gi|46309190|emb|CAG25818.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309200|emb|CAG25823.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309202|emb|CAG25824.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 93  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPNNKAER 241


>gi|46309192|emb|CAG25819.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309204|emb|CAG25825.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309206|emb|CAG25826.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309208|emb|CAG25827.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 93  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPNNKAER 241


>gi|5107689|pdb|1SHV|A Chain A, Structure Of Shv-1 Beta-Lactamase
 gi|40889241|pdb|1ONG|A Chain A, Shv-1 Beta-Lactamase With A Penem Inhibitor
 gi|55669552|pdb|1Q2P|A Chain A, Shv-1 Class A Beta-Lactamase Complexed With Penem
           Way185229
 gi|55670455|pdb|1VM1|A Chain A, Structure Of Shv-1 Beta-Lactamase Inhibited By Tazobactam
 gi|110590176|pdb|2G2U|A Chain A, Crystal Structure Of The Shv-1 Beta-LactamaseBETA-
           Lactamase Inhibitor Protein (Blip) Complex
 gi|118137873|pdb|2H5S|A Chain A, Sa2-13 Penam Sulfone Complexed To Wt Shv-1 Beta-Lactamase
 gi|189096171|pdb|3C4O|A Chain A, Crystal Structure Of The Shv-1 Beta-LactamaseBETA-
           Lactamase Inhibitor Protein (Blip) E73mS130KS146M
           COMPLEX
 gi|189096173|pdb|3C4P|A Chain A, Crystal Structure Of The Shv-1 Beta-LactamaseBETA-
           Lactamase Inhibitor Protein (Blip) E73m Complex
 gi|208435576|pdb|2ZD8|A Chain A, Shv-1 Class A Beta-Lactamase Complexed With Meropenem
 gi|312597333|pdb|3MKE|A Chain A, Shv-1 Beta-Lactamase Complex With Lp06
 gi|312597334|pdb|3MKF|A Chain A, Shv-1 Beta-Lactamase Complex With Gb0301
 gi|312597359|pdb|3MXR|A Chain A, Shv-1 Beta-Lactamase Complex With Compound 1
 gi|312597360|pdb|3MXS|A Chain A, Shv-1 Beta-Lactamase Complex With Compound 2
          Length = 265

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|41079307|gb|AAR99493.1| extended-spectrum beta-lactamase CTX-M-34 [Escherichia coli]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +RQF ++    +   +      A+T  +                  L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTVDVQQKLAELEQQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 -FTCASGFNIVASAIQGDQSLIAVI 243
                +  +I     +    LI V 
Sbjct: 240 SCDYGTTNDIAVIWPKDRAPLILVT 264


>gi|281335952|gb|ADA62533.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281335964|gb|ADA62539.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|90408305|ref|ZP_01216470.1| penicillin-binding protein 4 precursor (PBP-4) [Psychromonas sp.
          CNPT3]
 gi|90310606|gb|EAS38726.1| penicillin-binding protein 4 precursor (PBP-4) [Psychromonas sp.
          CNPT3]
          Length = 471

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 3/68 (4%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIA---ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLT 57
          M + LV            +  +           Y ++D  T   +  ++ +    PAS+ 
Sbjct: 1  MYKILVSFFFCSTLWANEWQDLERFLPPGTQLSYLVVDAATQKTVVSHHANTLRTPASVQ 60

Query: 58 KLMTAYVV 65
          K++TA   
Sbjct: 61 KVLTALAA 68


>gi|281335944|gb|ADA62529.1| CTX-M-62-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|167763974|ref|ZP_02436101.1| hypothetical protein BACSTE_02357 [Bacteroides stercoris ATCC
          43183]
 gi|167698090|gb|EDS14669.1| hypothetical protein BACSTE_02357 [Bacteroides stercoris ATCC
          43183]
          Length = 482

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 21/87 (24%)

Query: 1  MRQFLVI---IAMAMLSNIFPFLSIAETNKLPYYTL------------------LDTNTG 39
          MR++ +    + + ++  + P   I+         L                   D    
Sbjct: 7  MRKYCLFPIVLILTLIPCVLPAQGISPETNSLSSQLDTLIKYQLPAGSNVSVSAYDLTAN 66

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVF 66
           V+ +   D    PAS  KL+T     
Sbjct: 67 KVLYDYQADKLSRPASTMKLLTTITAL 93


>gi|126030588|pdb|2H0T|A Chain A, Crystal Structure Of The M69v E166a Double Mutant Of Shv-1
           B-Lactamase Complexed To Clavulanic Acid
 gi|126030589|pdb|2H0Y|A Chain A, Crystal Structure Of The M69v E166a Double Mutant Of Shv-1
           B-Lactamase Complexed To Sulbactam
 gi|126030590|pdb|2H10|A Chain A, Crystal Structure Of The M69v E166a Double Mutant Of Shv-1
           B-Lactamase Complexed To Tazobactam
          Length = 265

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 59/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMVSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L   AT 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWATE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|216700341|ref|YP_002332251.1| extended-spectrum beta-lactamase CTX-M-53 [Salmonella enterica
           subsp. enterica serovar Westhampton]
 gi|82393853|gb|ABB72225.1| extended-spectrum beta-lactamase CTX-M-53 [Salmonella enterica
           subsp. enterica serovar Westhampton]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +RQF ++    +   +      A+T  +                  L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTVDVQQKLAELEQQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI VI
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVI 264


>gi|313510880|gb|ADR66515.1| beta-lactamase CTX-M-79 [Escherichia coli]
          Length = 288

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 80/293 (27%), Gaps = 34/293 (11%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 2   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 59

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 60  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 119

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 120 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 179

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 180 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 235

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGFY 265
                  N +A     D+  LI V         A  R      +A +++ G Y
Sbjct: 236 SGGYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTNGLY 288


>gi|121495529|emb|CAL80726.1| beta-lactamase CTX-M-60 [Klebsiella pneumoniae]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 73/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVII--AMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++   A+ +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATAAVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + + ++L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPSLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|46562014|gb|AAT01223.1| beta-lactamase SHV-53 [Klebsiella pneumoniae]
          Length = 242

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 62/242 (25%), Gaps = 9/242 (3%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 1   IISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 61  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 120

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  +            F++ + +    L    T    A         T A   A L 
Sbjct: 121 NSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLR 180

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + +         Q+    +  +       +V         KTG        IVA    
Sbjct: 181 KLLISQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGAGERGARGIVALLGP 240

Query: 235 GD 236
            +
Sbjct: 241 NN 242


>gi|84515936|ref|ZP_01003297.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Loktanella vestfoldensis SKA53]
 gi|84510378|gb|EAQ06834.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Loktanella vestfoldensis SKA53]
          Length = 490

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 18 PFLSIAETNKLPYYT-------LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             +  ++              L D  TG V+       P  PAS+TK +TA     
Sbjct: 38 SPRAALDSIVARAGISGQVGVALGDPATGEVLETYNAAAPLPPASVTKAVTALYALE 94


>gi|281335970|gb|ADA62542.1| CTX-M-28-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|119494566|ref|ZP_01624704.1| Penicillin-binding protein, transpeptidase [Lyngbya sp. PCC 8106]
 gi|119452098|gb|EAW33308.1| Penicillin-binding protein, transpeptidase [Lyngbya sp. PCC 8106]
          Length = 478

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 78/243 (32%), Gaps = 10/243 (4%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
           I          K P   L+D +TG    +   +  +  AS  K+      F  + E K  
Sbjct: 201 ILALTPENSDLK-PGILLVDLDTGG-YVDINSESAFAAASTIKVPILVAFFQAVDEGKIS 258

Query: 76  LTTPITIS-KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
           L   +T+  ++ +           G+  T       +IV S N     + E L       
Sbjct: 259 LNEVLTMEGQHIAGGSGDMQYQPSGTEYTALETATKMIVISDNTATNMLIERL-----GG 313

Query: 135 VQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLE 194
            + +N    + GL  T   +    ++  + TT +D+  L               + +   
Sbjct: 314 AEFINQKFLDWGLHNTVIRDVLPDLRGTNKTTPKDLVNL-LTQLNQGGLVSMKSRDRIFR 372

Query: 195 IKGKKYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN 253
           I  K   ++  A G   GA    KTG   +   ++    +   +  +  +L   +     
Sbjct: 373 IMEKTENDSLLASGLGRGATIAHKTGNLKSVSGDVGLIDLPNGKRYLLAVLVERNDEDSA 432

Query: 254 KVS 256
             S
Sbjct: 433 AES 435


>gi|82655094|emb|CAJ19616.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
 gi|82655096|emb|CAJ19617.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 69/267 (25%), Gaps = 13/267 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NTAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILG--ALDRNTRNKVSA 257
             +   ++ + L   A     RN+  A
Sbjct: 248 DGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|327404042|ref|YP_004344880.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Fluviicola taffensis DSM 16823]
 gi|327319550|gb|AEA44042.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Fluviicola taffensis DSM 16823]
          Length = 493

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 12/79 (15%)

Query: 1  MRQFLVIIAMA-----------MLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPD 48
          +R F + I              + + I  F S A        +T +D + G ++A   P 
Sbjct: 8  LRIFAIGILFFAGKNVGFSQNSIQTAIDAFSSNAYFANASISFTAMDCSNGQILASKNPT 67

Query: 49 HPWNPASLTKLMTAYVVFS 67
             +PAS TKL      F 
Sbjct: 68 LSLSPASTTKLFATATAFQ 86


>gi|281335998|gb|ADA62556.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|82655092|emb|CAJ19615.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 69/267 (25%), Gaps = 13/267 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NSAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILG--ALDRNTRNKVSA 257
             +   ++ + L   A     RN+  A
Sbjct: 248 DGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|282849999|ref|ZP_06259381.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
 gi|282580188|gb|EFB85589.1| conserved hypothetical protein [Veillonella parvula ATCC 17745]
          Length = 272

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 73/239 (30%), Gaps = 12/239 (5%)

Query: 23  AETNKLPYYTLL--DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           A    + Y  L   D     +IA    +   + ASL K++    VF   + ++  +   +
Sbjct: 22  APAGNISYAVLQFDDEEEPTLIAARGENTVHSSASLIKVLIMEYVFHLARTEQLDINDTV 81

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +S+              G        L  L++  +++IA  +  ++       ++++N 
Sbjct: 82  PLSRTPRVEGGGALQELVGKHSFTYLELCRLMMVLSDNIATNLLITVL-----GMENINA 136

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS----WRIKTDFPQYMHYFQIKGLEIK 196
            ++ LG+                      +  +S    ++   +      Y +     + 
Sbjct: 137 RAEKLGVDEMELNRMMMDFNALAEGRDNHITAMSLARLYKHIFECRDRDAYGREMWNILG 196

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
            +++ +              KTG       +              ++L +   N R K 
Sbjct: 197 RQQFRDILPFYWGEGIRFHHKTGSLDRVEHDGGVIETFRGH-FCFILLMSDIDNDRGKE 254


>gi|257067598|ref|YP_003153853.1| beta-lactamase class A [Brachybacterium faecium DSM 4810]
 gi|256558416|gb|ACU84263.1| beta-lactamase class A [Brachybacterium faecium DSM 4810]
          Length = 273

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 1/74 (1%)

Query: 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            + A       + LLD   GHV++      P+  AS  KL          ++    L+ 
Sbjct: 4  PTAAAPDEAAVSHCLLDVE-GHVLSAAGAARPYYAASTIKLHVLVAALRAAEQGMLDLSA 62

Query: 79 PITISKNASEYPPS 92
           +  ++        
Sbjct: 63 QVPATRTFRGADGR 76


>gi|5001722|gb|AAD37116.1|AF123246_1 chromosomic class A beta-lactamase [Stenotrophomonas maltophilia]
          Length = 304

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 60/213 (28%), Gaps = 2/213 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 62  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEKDLLSYAP 121

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 122 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSVTRNDRNEP 181

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A   + L+     +  Q     Q     I  +       A    
Sbjct: 182 DVNLFAKGDPRDTTSPAAMASSLARFAVGNGLQPASRQQFTDWLIDNQTGDACLRAGLGK 241

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               G KTG       N +A         + V+
Sbjct: 242 RWRVGDKTGSNGDDTRNDIAVLWPHAGGAVWVV 274


>gi|6979150|gb|AAF34334.1| beta-lactamase SHV-2 variant [Klebsiella pneumoniae]
          Length = 260

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 59/215 (27%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEAFPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG +      IVA     ++   ++ + L
Sbjct: 215 WFIADKTGASERGARGIVALLGPNNKAERIVVIYL 249


>gi|120598793|ref|YP_963367.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella sp. W3-18-1]
 gi|120558886|gb|ABM24813.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella sp. W3-18-1]
          Length = 504

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 14  SNIFPFLSIAETNKLPYYTL-LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           + +   ++           L LD     ++     D    PAS  K++TA    + L  +
Sbjct: 37  TTLSQSIADINPRHSQTALLALDLANNQILYSQQADTLLVPASTQKILTAVTAMAELGTE 96

Query: 73  KAMLTTPI 80
              +T   
Sbjct: 97  FRYVTELW 104


>gi|146293130|ref|YP_001183554.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella putrefaciens CN-32]
 gi|145564820|gb|ABP75755.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella putrefaciens CN-32]
          Length = 504

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)

Query: 14  SNIFPFLSIAETNKLPYYTL-LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           + +   ++           L LD     ++     D    PAS  K++TA    + L  +
Sbjct: 37  TTLSQSIADINPRHSQTALLALDLANNQILYSQQADTLLVPASTQKILTAVTAMAELGTE 96

Query: 73  KAMLTTPI 80
              +T   
Sbjct: 97  FRYVTELW 104


>gi|57339494|gb|AAW49734.1| penicillinase OKP-6 [Klebsiella pneumoniae]
 gi|197724707|emb|CAP12355.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 70/267 (26%), Gaps = 13/267 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A     L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG        IVA    
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 247

Query: 235 GDQ--SLIAVILG--ALDRNTRNKVSA 257
             +   ++ + L   A     RN+  A
Sbjct: 248 DGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|8469130|sp|O65976|BLC6_SALTY RecName: Full=Beta-lactamase CTX-M-6; AltName: Full=Cefotaximase 6;
           Flags: Precursor
 gi|3021579|emb|CAA06312.1| CTX-M-7 [Salmonella typhimurium]
          Length = 291

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 80/288 (27%), Gaps = 26/288 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +R+ ++ +   +          A+ N +                  L++  +   ++   
Sbjct: 6   IRRSMLTVMATLPLLFSSATLHAQANSVQQQLEALEKSSGGRLGVALINTADNSQILYV- 64

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    +  K +L   + I  +        +      TMTL 
Sbjct: 65  -ADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIRASDLVNYNPIAEKHVNGTMTLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   L   +K   F + + + +  L  +     +A        
Sbjct: 124 QLGAGALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNSAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            T       L               Q+            +  A        G KTG    
Sbjct: 184 TTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWGVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
              N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 244 GTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|85706437|ref|ZP_01037531.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseovarius sp. 217]
 gi|85669210|gb|EAQ24077.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseovarius sp. 217]
          Length = 508

 Score = 46.9 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            Y + D  TG V+  +       PAS+TK +TA      
Sbjct: 74  GYAVADARTGQVLEASEGTTGLPPASVTKAVTALYALDA 112


>gi|231639|sp|Q01166|BLAC_YEREN RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|48814|emb|CAA40357.1| beta-lactamase [Yersinia enterocolitica]
 gi|318605692|emb|CBY27190.1| beta-lactamase [Yersinia enterocolitica subsp. palearctica Y11]
 gi|330863648|emb|CBX73755.1| beta-lactamase [Yersinia enterocolitica W22703]
 gi|228208|prf||1718314A beta lactamase I
          Length = 294

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 72/263 (27%), Gaps = 22/263 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP----------------YYTLLDTNTG-HVIA 43
           +R+ L++  + +    F   + A                         +++T  G  ++ 
Sbjct: 6   LRRSLLLAGITLPLVSFALPAWANALPASVDKQLAELERNANGRLGVAMINTGNGTKILY 65

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
                  +   S  K M A  V    + +  +L   I   ++        +       MT
Sbjct: 66  --RAAQRFPFCSTFKFMLAAAVLDQSQSQPNLLNKHINYHESDLLSYAPITRKNLAHGMT 123

Query: 104 LDNALKLLIVKSANDIAVAIAESLC--KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       I  S N  A  + + L       +F + + +    L         A      
Sbjct: 124 VSELCAATIQYSDNTAANLLIKELGGLAAVNQFARSIGDQMFRLDRWEPDLNTARPNDPR 183

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF- 220
              T A   A ++  +  D  +     Q+            T  A        G KTG  
Sbjct: 184 DTTTPAAMAASMNKLVLGDALRPAQRSQLAVWLKGNTTGDATIRAGAPTDWIVGDKTGSG 243

Query: 221 TCASGFNIVASAIQGDQSLIAVI 243
              +  +I          ++ V+
Sbjct: 244 DYGTTNDIAVLWPTKGAPIVLVV 266


>gi|261872208|gb|ACY02886.1| CTX-M-90 extended-spectrum beta-lactamase [Proteus mirabilis]
          Length = 278

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 63/256 (24%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|260576409|ref|ZP_05844399.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
           4)-like protein [Rhodobacter sp. SW2]
 gi|259021292|gb|EEW24598.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
           4)-like protein [Rhodobacter sp. SW2]
          Length = 323

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           ++   ++ A       + + D  TG V+    PD    PAS+ K +T+      L    
Sbjct: 52  SVADLIAAARLGGAVGFVVADAATGRVLEAESPDLAQPPASVAKTITSLFALERLGVGH 110


>gi|214011137|gb|ACJ61335.1| RTG-4 [Acinetobacter baumannii]
          Length = 298

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 80/292 (27%), Gaps = 19/292 (6%)

Query: 5   LVIIAMAMLSNIF-----PFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTK 58
            + + +++ +N          +              D  TG    E+  +  +   S  K
Sbjct: 17  FLCLTLSLNANATDSVLEAVTNAETELGARIGLAAHDLETGKR-WEHKSNERFPLTSTFK 75

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST-MTLDNALKLLIVKSAN 117
            +    V   +   K  +   +  S++        +    G   M+L    +  +  S N
Sbjct: 76  TLACANVLQRVDLGKERIDRVVRFSESNLVTYSPVTEKHVGKKGMSLAELCQATLSTSDN 135

Query: 118 DIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
             A  I +++   +   KF++ + + +  L    T    A    +    T    +  L  
Sbjct: 136 SAANFILQAIGGPKALTKFLRSIGDDTTRLDRWETELNEAVPGDKRDTTTPIAMVTTLEK 195

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
            +  +        Q++      +                  +TG        I A     
Sbjct: 196 LLIDETLSIKSRQQLESWLKGNEVGDALFRKGVPSDWIVADRTGAGGYGSRAITAVMWPP 255

Query: 236 DQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSN 287
           ++  I   L   + +   +           N    K    I K    +N  N
Sbjct: 256 NRKPIVAALYITETDASFEE---------RNAVIAKIGEQIAKTVLMENSRN 298


>gi|213133716|gb|ACJ43257.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 277

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 63/256 (24%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|298206568|ref|YP_003717508.1| beta-lactamase CTX-M-65 [Escherichia coli]
 gi|125664055|gb|ABN51008.1| beta-lactamase CTX-M-65 [Citrobacter freundii]
 gi|126013668|gb|ABN69105.1| extended-spectrum beta-lactamase CTX-M-65 [Escherichia coli]
 gi|159032446|gb|ABW87621.1| extended-spectrum beta-lactamase CTX-M-65 [Escherichia coli]
 gi|171188400|gb|ACB41778.1| CTX-M-type extended spectrum beta-lactamase [Escherichia coli]
 gi|213133670|gb|ACJ43234.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|213133672|gb|ACJ43235.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|213133712|gb|ACJ43255.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|214011881|gb|ACJ61679.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
 gi|214011883|gb|ACJ61680.1| CTX extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906385|gb|ACO36037.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906387|gb|ACO36038.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906389|gb|ACO36039.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906391|gb|ACO36040.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906393|gb|ACO36041.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906395|gb|ACO36042.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|225906397|gb|ACO36043.1| CTX-M-65 extended-spectrum beta-lactamase [Escherichia coli]
 gi|237511597|gb|ACQ99520.1| CTX-M-65 extended-spectrum beta-lactamase [Salmonella sp. YLA4]
 gi|256576430|gb|ACU87989.1| extended-spectrum beta-lactamase CTX-M-65 [Escherichia coli]
 gi|256956403|gb|ACV32744.1| beta-lactamase [Escherichia coli]
 gi|282192944|gb|ADA81875.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|296537973|gb|ADH29993.1| beta-lactamase CTX-M-65 [Escherichia coli O25b:H4 str. EC958]
 gi|296538024|gb|ADH30043.1| beta-lactamase CTX-M-24 [Escherichia coli O25b:H4 str. EC958]
 gi|321496187|gb|ADW93965.1| CTX-M-65 [Escherichia coli]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 63/256 (24%), Gaps = 18/256 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M    V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAVAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGDYGTTND 248

Query: 229 VASAIQGDQ-SLIAVI 243
           +A      +  L+ V 
Sbjct: 249 IAVIWPQGRAPLVLVT 264


>gi|179251469|gb|ACB78192.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 267

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 32  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 91

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 92  SEKYLADGMTVGELCAAAITMSDNSAANLLLATVGGPVGLTAFLRQIGDNVTRLDRWETE 151

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 152 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 211

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 212 WFIADKTG------------AGERGARGIVALLGPNNKAER 240


>gi|259014676|gb|ACV88638.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 222

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 59/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 11  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 70

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 71  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 130

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V +  
Sbjct: 131 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLSAG 190

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 191 WFIADKTG------------AGERGARGIVALLGPNNKAER 219


>gi|46309194|emb|CAG25820.1| beta-lactamase [Klebsiella pneumoniae]
 gi|46309196|emb|CAG25821.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 59/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 33  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 92

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 93  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 152

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V +  
Sbjct: 153 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLSAG 212

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 213 WFIADKTG------------AGERGARGIVALLGPNNKAER 241


>gi|94970862|ref|YP_592910.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Candidatus Koribacter versatilis Ellin345]
 gi|94552912|gb|ABF42836.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Candidatus Koribacter versatilis Ellin345]
          Length = 1076

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 21/82 (25%), Gaps = 15/82 (18%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK------------LPYYT---LLDTNTGHVIAEN 45
          M++F +++    L+  +                                   +G V+ E 
Sbjct: 1  MKRFRILLPAFFLATTWVSAQAPSDLAQRVEEIMTRPEFAHATFGMQFYSLKSGKVVYEL 60

Query: 46 YPDHPWNPASLTKLMTAYVVFS 67
                 P S TKL T      
Sbjct: 61 NAQKLMVPGSTTKLFTEGTALE 82


>gi|257055563|ref|YP_003133395.1| penicillin-binding protein, beta-lactamase class C
           [Saccharomonospora viridis DSM 43017]
 gi|256585435|gb|ACU96568.1| penicillin-binding protein, beta-lactamase class C
           [Saccharomonospora viridis DSM 43017]
          Length = 270

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 10/139 (7%)

Query: 24  ETNKLPYYTL-LDTNTGHVIAENYPDHPWNP-ASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
             +      +  D   G V+  +       P AS+TKL+TAY     L+E    L TP  
Sbjct: 11  PVDNAAAAVVKAD---GTVLGTHGDTARVFPLASVTKLLTAYTALIALEEGAVELDTPAG 67

Query: 82  I---SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +        S   F +   +      +L        +A A+ E        + +  
Sbjct: 68  PEGSTIRHLLAHTSGLGFNEHKMLAEPGKRRLYSNAGFEQLADALTEHTGIAFDAYQEE- 126

Query: 139 NNTSKNLGLSATHFMNAHG 157
               + LG+  T    + G
Sbjct: 127 -ALLQPLGMHDTVLKGSPG 144


>gi|90580535|ref|ZP_01236340.1| hypothetical D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio angustum S14]
 gi|90438193|gb|EAS63379.1| hypothetical D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Photobacterium angustum S14]
          Length = 467

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNK-----LPYYTLL-DTNTGHVIAENYPDHPWNPAS 55
          ++ L    +    + F   S  +  +          L+ +  T  VI +   D    PAS
Sbjct: 3  KKLLCSALITTSFSSFAAFSPQQAIEHLPKGSDVALLIVNPATNKVIYDKRADELQAPAS 62

Query: 56 LTKLMTAYVV 65
            K +TA   
Sbjct: 63 TQKTITALAA 72


>gi|315364375|pdb|2XQZ|A Chain A, Neutron Structure Of The Perdeuterated Toho-1 R274n R276n
           Double Mutant Beta-Lactamase
          Length = 260

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 67/237 (28%), Gaps = 11/237 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 25  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 82

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 83  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 142

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 143 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 202

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMG 263
            G KTG       N +A     +   L+ V         A +RN     +A +++ G
Sbjct: 203 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAENRNDILAAAAKIVTHG 259


>gi|87124814|ref|ZP_01080662.1| putative beta-lactamase [Synechococcus sp. RS9917]
 gi|86167693|gb|EAQ68952.1| putative beta-lactamase [Synechococcus sp. RS9917]
          Length = 385

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 9/154 (5%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            L+ AE +      LL  + G   AE  PD     AS  K     V    L         
Sbjct: 103 ALAAAEKDLQASAFLLKLDDGR-YAELSPDTALPAASSIKTPILLVALELLDAGDLSWNE 161

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+T+SK            K   +    + +   +++ +++ A  +            + +
Sbjct: 162 PLTLSKTTVGGGAGWMASKPLGSRFPTHEVATEMIRVSDNTATNLL----IERVGGKELL 217

Query: 139 NNTSKNLGLSATHFMNAHGVVQHG--HYTTARDM 170
           N     LGL  +  +  + +      + T+ARD+
Sbjct: 218 NERFNALGL--SATVVNNWLPDLEGTNTTSARDL 249


>gi|331701606|ref|YP_004398565.1| beta-lactamase class A [Lactobacillus buchneri NRRL B-30929]
 gi|329128949|gb|AEB73502.1| beta-lactamase class A [Lactobacillus buchneri NRRL B-30929]
          Length = 248

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 11/220 (5%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
            Y  L+  + G  + ++     +  ASL KL     V          L   + +S +   
Sbjct: 18  KYGLLI-QSNGQTLVDHDSHEAFPSASLIKLAILNDVLDS----NVDLDQSVDVSTDELV 72

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                          L + L L+I  S N     +   +     +     ++     GL 
Sbjct: 73  GGAGILQLMSVRPWKLRDLLALMISVSDNSATNVVISLMGMNHIQHYLQTHD-FHETGLE 131

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                         +YT+A +   L  +   +  +   +F  +    K       N+   
Sbjct: 132 RYLMDGRALASGKNNYTSAAESLRLLQQALHNGSEVQSWFANQQFRYKLP----GNFDES 187

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
               A   KTG       ++       + S+   +L A  
Sbjct: 188 GENVAVYNKTGEGNLIDHDVAQIVY-NNHSVDIAMLTAGS 226


>gi|94502846|gb|ABF29653.1| beta-lactamase [Escherichia coli]
          Length = 252

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 6/215 (2%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 32  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 89

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 90  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 149

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 150 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 209

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A      +  L+ V 
Sbjct: 210 TSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVT 244


>gi|59711706|ref|YP_204482.1| beta-lactamase [Vibrio fischeri ES114]
 gi|59479807|gb|AAW85594.1| beta-lactamase [Vibrio fischeri ES114]
          Length = 283

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 70/252 (27%), Gaps = 11/252 (4%)

Query: 1   MRQFLVIIAMAMLSN-----IFPFLSIAETNKLPYYT---LLDTNTGHVIAENYPDHPWN 52
           M+    +  + +L+N            A       Y    +L+T T    A    D  + 
Sbjct: 1   MKIKPFLFGLIVLANNAIAGSLTQNIEAIELSSGGYIGVSVLNTETNKTWAYK-GDQRFP 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K +    +               +I+K         +    G+ +T   A +  +
Sbjct: 60  MMSTFKTLACAKMLYDSSVGGIDKYKTTSITKEQIMPWSPVTEPLIGNMITTQKACEATM 119

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + S N  A  +   +       +F++ M +T   L         +    +    T     
Sbjct: 120 LMSDNTAANIVLNEIGGPSSLTQFLRAMGDTKTRLDRIEPELNESKNGDKRDTTTPVAMS 179

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L+  +  +         +K   +  K       ++     +   ++G        I A
Sbjct: 180 QTLNALLFGNTLNSQDEQTLKSWMMNNKVSDPLLRSILPNDWSIADRSGAGGFGSRGITA 239

Query: 231 SAIQGDQSLIAV 242
           +        I +
Sbjct: 240 AIWNDKHQPIII 251


>gi|73536112|pdb|2A49|A Chain A, Crystal Structure Of Clavulanic Acid Bound To E166a
           Variant Of Shv-1 Beta-Lactamase
          Length = 269

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 59/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L   AT 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWATE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|73536076|pdb|2A3U|A Chain A, Crystal Structure Of Sulbactam Bound To E166a Variant Of
           Shv-1 Beta-Lactamase
          Length = 270

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 59/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L   AT 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWATE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|46015456|pdb|1RCJ|A Chain A, Crystal Structure Of E166a Mutant Of Shv-1 Beta-Lactamase
           With The Trans-Enamine Intermediate Of Tazobactam
          Length = 265

 Score = 46.5 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 59/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 24  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 83

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L   AT 
Sbjct: 84  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWATE 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 144 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 203

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 204 WFIADKTG------------AGERGARGIVALLGPNNKAER 232


>gi|41059115|gb|AAR99058.1| CTX-M beta-lactamase [Klebsiella pneumoniae]
          Length = 257

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 57/215 (26%), Gaps = 6/215 (2%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 27  LIDTADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 84

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 85  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 144

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 145 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 204

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A      +  L+ V 
Sbjct: 205 TSWTAGDKTGSGDYGTTNDIAVIWPQGRAPLVLVT 239


>gi|78485138|ref|YP_391063.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Thiomicrospira
          crunogena XCL-2]
 gi|78363424|gb|ABB41389.1| D-Ala-D-Ala carboxypeptidase 3 (S13) [Thiomicrospira crunogena
          XCL-2]
          Length = 415

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 12/79 (15%)

Query: 1  MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA---------ENYPDH 49
          MR+ L    +   +L   F   +   +  L         TG V+          E     
Sbjct: 1  MRRLLYQWSVGAGLLLGSFLLHAAPASVSLKEALSQLHETG-VLMLNAQQEPVIEKDASK 59

Query: 50 PWNPASLTKLMTAYVVFSF 68
             PAS TKL+TAY+    
Sbjct: 60 LRVPASTTKLVTAYLALKH 78


>gi|291566052|dbj|BAI88324.1| probable D-alanyl-D-alanine carboxypeptidase [Arthrospira
          platensis NIES-39]
          Length = 474

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 21/88 (23%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLD--------------TNTG 39
          M+   + +   +LS   P ++I   +  P           LD               ++G
Sbjct: 1  MKSIAIALISTLLSFSGPVMAIEPRSICPAVLEAEINAIALDPKFSRSRWGILIESLDSG 60

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVFS 67
           V+     +  + PAS  KL+T      
Sbjct: 61 QVLYSLDSERFFLPASTIKLLTTVASME 88


>gi|160903197|ref|YP_001568778.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Petrotoga mobilis SJ95]
 gi|160360841|gb|ABX32455.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Petrotoga mobilis SJ95]
          Length = 453

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           D  T  V+     D  + PAS TKL+TA V   
Sbjct: 106 DLGTNEVLFNYNSDKLFIPASNTKLITALVALE 138


>gi|149278990|ref|ZP_01885124.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
          4) [Pedobacter sp. BAL39]
 gi|149230269|gb|EDM35654.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
          4) [Pedobacter sp. BAL39]
          Length = 470

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%), Gaps = 18/84 (21%)

Query: 1  MRQ-FLVIIAMAMLSNIFPFLSIAE-------------TNKLPYYT----LLDTNTGHVI 42
          M+Q   +I++  +  +     + A                +  Y      +LD  +G  +
Sbjct: 1  MKQTKSLILSFLLALSFQAASAQAPLQKLEQAYNTLNKDPQARYAITTLLVLDARSGKTL 60

Query: 43 AENYPDHPWNPASLTKLMTAYVVF 66
               +   + AS  K +T+   F
Sbjct: 61 FGRNENIGISTASTLKTITSATAF 84


>gi|258651088|ref|YP_003200244.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Nakamurella multipartita DSM 44233]
 gi|258554313|gb|ACV77255.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Nakamurella multipartita DSM 44233]
          Length = 466

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           L +                 ++D  +G V+       P  PAS  KL+T
Sbjct: 75  LESQLAAQFANPALAQFSGVIIDPESGTVLWNQNSTAPQLPASTAKLLT 123


>gi|197215899|gb|ACH53187.1| CTX-M-32 beta-lactamase [Escherichia coli]
          Length = 282

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|260887395|ref|ZP_05898658.1| beta-lactamase [Selenomonas sputigena ATCC 35185]
 gi|330840053|ref|YP_004414633.1| hypothetical protein Selsp_2228 [Selenomonas sputigena ATCC 35185]
 gi|260862864|gb|EEX77364.1| beta-lactamase [Selenomonas sputigena ATCC 35185]
 gi|329747817|gb|AEC01174.1| hypothetical protein Selsp_2228 [Selenomonas sputigena ATCC 35185]
          Length = 321

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 71/236 (30%), Gaps = 15/236 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASE 88
              L D + G+       D     AS+ K+         +K  +  L   + + + +   
Sbjct: 85  TVYLADPDDGNAPLIRDADE-MRAASMIKVFILACAMEKVKAGELHLDDVLRLEEVDKVG 143

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                + ++ G+  +++  L+ +I +S N     + + L  T       +N   +  G  
Sbjct: 144 GAGVITGYRAGTVFSVEELLRQMIAESDNTATNMMIDRLGMT------EINGYMRAHGYD 197

Query: 149 ATHFMNAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           A+                 + T+A+D+     R+         Y       +  +     
Sbjct: 198 ASRLQRKMMDDAAVKEGRENITSAKDLGTFFLRLYRSECVGEPYDGKMRDMLFAQTDREC 257

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL-DRNTRNKVSAS 258
                        KTG       +      +  +++I VIL    +R  R      
Sbjct: 258 FPQALPGARIAH-KTGELDRLYADGGILYGEDGRAVILVILADDIERRGRAIEMMR 312


>gi|269797551|ref|YP_003311451.1| beta-lactamase class A-like protein [Veillonella parvula DSM 2008]
 gi|269094180|gb|ACZ24171.1| Beta-lactamase class A-like protein [Veillonella parvula DSM 2008]
          Length = 272

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 71/239 (29%), Gaps = 12/239 (5%)

Query: 23  AETNKLPYYTLL--DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           A    + Y  L   D     +IA    +   + ASL K++    VF   + ++  +   +
Sbjct: 22  APAGNISYAVLQFDDEEEPTLIAARGENTVHSSASLIKVLIMEYVFHLARTEQLDINDTV 81

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            +S+              G        L  L++  +++IA  +  ++       ++++N 
Sbjct: 82  PLSRTPRVEGGGALQELVGKHSFTYLELCRLMMVLSDNIATNLLITVL-----GMENINA 136

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP---QYMHYFQIKGLEIKG 197
            ++ LG+                      +  +S           +    +  +   I G
Sbjct: 137 RAEKLGVDEMELNRMMMDFNALAEGRDNHITAMSLARLYKHIFECRDRDVYGREMWNILG 196

Query: 198 KKYPNTNWAVGTFLGA-DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
           ++            G     KTG       +              ++L +   N R K 
Sbjct: 197 RQQFRDILPFYWGEGIRFHHKTGSLDRVEHDGGVIETFRGH-FCFILLMSDIDNDRGKE 254


>gi|281335914|gb|ADA62514.1| CTX-M-61-like beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKVISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|159138975|gb|ABW89474.1| beta-lactamase shv-102 [Klebsiella pneumoniae]
          Length = 257

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 58/215 (26%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 21  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 80

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 81  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 140

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 141 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 200

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG        IVA     ++   ++ + L
Sbjct: 201 WFIADKTGAGERGARGIVALLSPNNKAERIVVIYL 235


>gi|159138973|gb|ABW89473.1| beta-lactamase shv-102 [Klebsiella pneumoniae]
          Length = 258

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 58/215 (26%), Gaps = 4/215 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 22  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 81

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 82  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETA 141

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 142 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 201

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                KTG        IVA     ++   ++ + L
Sbjct: 202 WFIADKTGAGERGARGIVALLSPNNKAERIVVIYL 236


>gi|281335980|gb|ADA62547.1| CTX-M-61-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|32307185|gb|AAP79046.1| beta-lactamase [Raoultella planticola]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A    D  +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLAGYRSDERFPMMSTFKVLLCGAVLSRVDAGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLTDGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTSFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +V    
Sbjct: 165 LNEARPGDVRDTTTPQAMARTLRNLLTGRVLSSASQQQLQRWMVEDKVAGPLLRSVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L G     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTGTPATMDERNKQIAAI 276


>gi|32307191|gb|AAP79049.1| beta-lactamase [Raoultella planticola]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A    D  +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLAGYRSDERFPMMSTFKVLLCGAVLSRVDAGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLTDGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTSFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +V    
Sbjct: 165 LNEARPGDVRDTTTPQAMARTLRNLLTGRVLSSASQQQLQRWMVEDKVAGPLLRSVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L G     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTGTPATMDERNKQIAAI 276


>gi|82400492|gb|ABB72997.1| beta-lactamase PLA-5A [Raoultella planticola]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A    D  +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLAGYRSDERFPMMSTFKVLLCGAVLSRVDAGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLTDGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTSFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +V    
Sbjct: 165 LNEARPGDVRDTTTPQAMARTLRNLLTGRVLSSASQQQLQRWMVEDKVAGPLLRSVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L G     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTGTPATMDERNKQIAAI 276


>gi|73665392|gb|AAZ79403.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 71/274 (25%), Gaps = 17/274 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENYPDH 49
           MR   + +   + +      +  +  +              Y  +D  +G  +A      
Sbjct: 1   MRYVCLCLISLVAALPLAVFASPQPLEQIKISEGQLAGRVGYVEMDLASGRTLAAWRASE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPLMSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     + +          F++ + +    L    T    A         T A
Sbjct: 121 AAITMSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPA 180

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                L   + T         Q+    +  +       AV         KTG        
Sbjct: 181 SMATTLRKLLTTPSLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRG 240

Query: 228 IVASAIQGDQ--SLIAVILG--ALDRNTRNKVSA 257
           IVA      +   ++ + L   A     RN+  A
Sbjct: 241 IVALLGPDGKAERIVVIYLRDTAATMAERNEQIA 274


>gi|124365352|gb|ABN09669.1| beta-lactamase CTX-M-61 [Salmonella enterica subsp. enterica
           serovar Typhimurium]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|6979148|gb|AAF34333.1| beta-lactamase SHV-1 variant [Klebsiella pneumoniae]
          Length = 260

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEAFPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 215 WFIADKTG------------AGERGARGIVALLGPNNKAER 243


>gi|254439950|ref|ZP_05053444.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Octadecabacter antarcticus 307]
 gi|198255396|gb|EDY79710.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Octadecabacter antarcticus 307]
          Length = 509

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            L D +TG ++ +        PAS+TK +TA      
Sbjct: 66  VLADADTGEMLEQIDAGIALPPASVTKAVTALYALDA 102


>gi|221229334|gb|ABO61021.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 304

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 56/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 62  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEKDLLSYAP 121

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 122 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSVTRNDRNEP 181

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 182 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFTDWLIDNQTGDACLRAGLAK 241

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 242 RWRVGDKTGSNGDDTRNDIAVLW 264


>gi|281335996|gb|ADA62555.1| CTX-M-32-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|221229325|gb|ABO61016.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 304

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 56/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 62  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEKDLLSYAP 121

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 122 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSVTRNDRNEP 181

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 182 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFTDWLIDNQTGDACLRAGLGK 241

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 242 RWRVGDKTGSNGDDTRNDIAVLW 264


>gi|221229319|gb|ABO61013.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 304

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 56/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 62  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEKDLLSYAP 121

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 122 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSVTRNDRNEP 181

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 182 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFTDWLIDNQTGDACLRAGLGK 241

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 242 RWRVGDKTGSNGDDTRNDIAVLW 264


>gi|109809899|gb|ABG46354.1| extended-spectrum beta-lactamase [Escherichia coli]
          Length = 277

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|74474868|dbj|BAE44422.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
 gi|74474876|dbj|BAE44426.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
 gi|74474878|dbj|BAE44427.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 290

 Score = 46.5 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 56/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 51  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEKDLLSYAP 110

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 111 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSVTRNDRNEP 170

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 171 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFTDWLIDNQTGDACLRAGLGK 230

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 231 RWRVGDKTGSNGDDTRNDIAVLW 253


>gi|197724678|emb|CAP12360.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 64/258 (24%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NTAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|42398296|gb|AAS13468.1| penicillinase OKP-5 [Klebsiella pneumoniae]
 gi|73665396|gb|AAZ79405.1| beta-lactamase [Klebsiella pneumoniae]
 gi|197724709|emb|CAP12356.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 64/258 (24%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NTAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|298206545|ref|YP_003717483.1| beta-lactamase [Escherichia coli]
 gi|3915633|sp|P28585|BLC1_ECOLX RecName: Full=Beta-lactamase CTX-M-1; AltName: Full=Beta-lactamase
           MEN-1; AltName: Full=Cefotaximase 1; Flags: Precursor
 gi|1524021|emb|CAA63262.1| ES-beta-lactamase [Escherichia coli]
 gi|16304813|emb|CAC95168.1| CTX-M-1 beta-lactamase [Escherichia coli]
 gi|16304820|emb|CAC95173.1| CTX-M-1 beta-lactamase [Proteus mirabilis]
 gi|70671432|emb|CAJ01342.1| beta-lactamase CTX-M-1 [Escherichia coli]
 gi|116643127|gb|ABK06383.1| beta-lactamase bla-CTX-M-1 [Escherichia coli]
 gi|192758060|gb|ACF04955.1| beta-lactamase CTX-M-1 [Escherichia coli]
 gi|209483439|gb|ACI47259.1| extended-spectrum class A beta-lactamase CTX-M-1 [Escherichia coli]
 gi|209483443|gb|ACI47262.1| extended-spectrum class A beta-lactamase CTX-M-1 [Klebsiella
           pneumoniae]
 gi|256956384|gb|ACV32728.1| beta-lactamase CTX-M1 [Escherichia coli]
 gi|256956396|gb|ACV32738.1| beta-lactamase CTX-M1 [Escherichia coli]
 gi|256956408|gb|ACV32748.1| ES-beta-lactamase [Escherichia coli]
 gi|256956421|gb|ACV32758.1| beta-lactamase CTX-M1 [Escherichia coli]
 gi|296537950|gb|ADH29970.1| beta-lactamase [Escherichia coli O25b:H4 str. EC958]
 gi|313585894|gb|ADR71056.1| beta lactamase CTX-M-1 [Escherichia coli]
 gi|328802646|emb|CBL58176.1| extended spectrum beta-lactamase [Escherichia coli]
 gi|328880016|emb|CBL58188.1| extended spectrum beta-lactamase [Escherichia coli]
 gi|1588603|prf||2209219A cefotaximase CTX-M-1
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|82655084|emb|CAJ19611.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 64/258 (24%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NSAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|281335994|gb|ADA62554.1| CTX-M-1-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|238801254|gb|ACR56340.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|238801256|gb|ACR56341.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|238801258|gb|ACR56342.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|238801260|gb|ACR56343.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|238801262|gb|ACR56344.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|238801264|gb|ACR56345.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
 gi|238801266|gb|ACR56346.1| beta-lactamase CTX-M-2 [Klebsiella pneumoniae]
          Length = 281

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 71/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLD-TNTGHVIAEN 45
           +R+ ++ +   +          A+ N +                  L++  +   ++   
Sbjct: 2   IRRSMLTVMATLPLLFSSATLHAQANSVQQQLEALEKSSGGRLGVALINTADNSQILY-- 59

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    +  K +L   + I K+        +      TMTL 
Sbjct: 60  RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEKHVNGTMTLA 119

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   L   +K   F + + + +  L  +      A        
Sbjct: 120 ELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNTAIPGDPRDT 179

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            T       L               Q+            +  A        G KTG    
Sbjct: 180 TTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKTGSGDY 239

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     +   L+ V 
Sbjct: 240 GTTNDIAVIWPENHAPLVLVT 260


>gi|224552432|gb|ACN54552.1| extended-spectrum beta-lactamase CTX-M-2 [Escherichia coli]
          Length = 271

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 47  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 104

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 105 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 164

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 165 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 224

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 225 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVT 255


>gi|30387195|ref|NP_848173.1| BlaP1 [Pasteurella multocida]
 gi|30314018|gb|AAP15300.1| beta-lactamase [Pasteurella multocida]
          Length = 288

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 80/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL++ ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLVFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|284050224|ref|ZP_06380434.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Arthrospira platensis str. Paraca]
          Length = 474

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 26/88 (29%), Gaps = 21/88 (23%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLD--------------TNTG 39
          M+   +     +LS   P ++       P           LD               ++G
Sbjct: 1  MKSIAIAFISTLLSFSGPVMATEPRPICPAVLEAEINAIALDPKFSRSRWGILIESLDSG 60

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVFS 67
           V+     +  + PAS  KL+T      
Sbjct: 61 QVLYSLDSERFFLPASTIKLLTTVASME 88


>gi|194477214|ref|YP_002049393.1| possible beta-lactamase family protein [Paulinella chromatophora]
 gi|171192221|gb|ACB43183.1| possible beta-lactamase family protein [Paulinella chromatophora]
          Length = 364

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 9/177 (5%)

Query: 10  MAMLSNIFPFLSIA-ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           +  LS ++  L+      K   + L+  + G   AE  PD P   ASL +     +    
Sbjct: 91  LLALSKVWANLAEGWPDLKASAFLLI-LDDGR-YAELEPDIPLPAASLIRFPILLIAMDE 148

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           L  ++ +    I I+++         T K  +T      +   +++ ++  A+ +     
Sbjct: 149 LDHERMLWNERIKITQDVLVSEGDLITKKSLNTQLKIYEVASEMIRMSDSTAINMFIKRL 208

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
             ++     +N    +LGL++T   N   +       T     ++      +  Q +
Sbjct: 209 GDKE----ILNQRFISLGLNSTCIKN--WLPDLNSENTISARDLVVIHTLVNTGQIL 259


>gi|73665390|gb|AAZ79402.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 65/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A     L 
Sbjct: 128 NTAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|23100600|ref|NP_694067.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
 gi|22778833|dbj|BAC15101.1| D-alanyl-D-alanine carboxypeptidase [Oceanobacillus iheyensis
           HTE831]
          Length = 508

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++D   G  +     D   +PAS  K++TA     
Sbjct: 72  VMDAANGDQLFSRNIDIRLHPASNMKVLTAVSALE 106


>gi|281335968|gb|ADA62541.1| CTX-M-57-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|82655086|emb|CAJ19612.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
 gi|82655088|emb|CAJ19613.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
 gi|82655090|emb|CAJ19614.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 65/258 (25%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A     L 
Sbjct: 128 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|288959993|ref|YP_003450333.1| beta-lactamase [Azospirillum sp. B510]
 gi|288912301|dbj|BAI73789.1| beta-lactamase [Azospirillum sp. B510]
          Length = 301

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 4/213 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPP 91
           +LDT TG  +     D  +   S  K + A  V   + + K  L   I ++K +   Y P
Sbjct: 60  VLDTATGR-LRGWRGDERFPMCSTFKFLLAAAVLKSVDQGKDRLDRRIPVTKADLLPYAP 118

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
            + T   G+  TL    +  +  S N  A  +            F++ + + +  L  + 
Sbjct: 119 FSETRLTGTPPTLAELCEAAVTLSDNTAANLLLPGVGDPAGLTAFLRGIGDQTTRLDRNE 178

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
               +A         T A  +  +   +  D  +    +++    I  K       A   
Sbjct: 179 PTLNSAIPGDPRDTTTPAAMVRGMERLLIGDVLRLDSRWRLVDWLIANKTGDKRLRAGLP 238

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                G KTG       N +A      ++ + +
Sbjct: 239 AGWRVGDKTGTGANGTANDIAIVWPDGRAPVLI 271


>gi|281335954|gb|ADA62534.1| CTX-M-61-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|114777089|ref|ZP_01452109.1| hypothetical protein SPV1_06994 [Mariprofundus ferrooxydans PV-1]
 gi|114552610|gb|EAU55070.1| hypothetical protein SPV1_06994 [Mariprofundus ferrooxydans PV-1]
          Length = 350

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 54/217 (24%), Gaps = 12/217 (5%)

Query: 30  YYTLLDTN--TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              L+D    +   +A+   D     ASL K+      F  +K+ K  L      +    
Sbjct: 91  SIALVDMTDPSNPELAQVNGDEMMYAASLPKIAVLLTAFELIKQGKLPLNRETRDTMTRM 150

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               SN        M   + +  ++                  + K+   +    +  G 
Sbjct: 151 IRYSSNKDATAMIDMVGKDYINTVMESP----------KYRLYDPKYNGGLWVGKEYAGG 200

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
           +A H    H +              +    +   P+Y    +    +             
Sbjct: 201 TAYHRDPLHNLSHGATAMQVARFYYMMQTGQLVSPRYSAEMKGIMADSGINHKFVKGLDA 260

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                    +   T  +     A      +  IAV L
Sbjct: 261 MHNPDIRMYRKSGTWRTYHADSALIEHNGRRYIAVAL 297


>gi|281336012|gb|ADA62563.1| CTX-M-3-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|149202021|ref|ZP_01878995.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseovarius sp. TM1035]
 gi|149145069|gb|EDM33098.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseovarius sp. TM1035]
          Length = 499

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
                +S A  +    Y + D  TG ++          PAS+TK +TA      L  + 
Sbjct: 50  TAEALISQANLSGRVGYAVADARTGQLLESGDATTGLPPASVTKAVTALYALDALGPEH 108


>gi|260905823|ref|ZP_05914145.1| beta-lactamase related protein [Brevibacterium linens BL2]
          Length = 320

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/249 (9%), Positives = 68/249 (27%), Gaps = 26/249 (10%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                D ++G  +  +  +   + AS+ K+   +            L   ++   +    
Sbjct: 69  SALAFDIDSGERVFAHNENDELDTASMGKVFLLHTALQMHVGGTLNLQERLSRRPSERVD 128

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                   +   +++ +   L+   S N     +   +       ++++    ++LG   
Sbjct: 129 ESGIWYLMEQEELSVYDVAVLVGAFSDNFATNVLIRRV------GLENVARQVEDLGYRN 182

Query: 150 THFMNAHGVVQHGH------YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
           +   +     +           TA +++    R   D        +I    +      + 
Sbjct: 183 SGLHDFLRWPRPAKAPRTLSTGTAAELSDFMARHAKDQFWDESTNEIFRRWLGAGADTSM 242

Query: 204 -----------NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL-IAVILGALDRNT 251
                      ++     +     KTG T  +       A+   + +  AV         
Sbjct: 243 VASAFDLDPLAHYNYQRDVWVW-NKTG-TNGTIRADSGIAMTPTRRVAYAVFANWEKDTD 300

Query: 252 RNKVSASLL 260
           R      ++
Sbjct: 301 RVVDVMPIM 309


>gi|109809903|gb|ABG46356.1| extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 276

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|305667435|ref|YP_003863722.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Maribacter sp. HTCC2170]
 gi|88709483|gb|EAR01716.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Maribacter sp. HTCC2170]
          Length = 422

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 13/80 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT-------------LLDTNTGHVIAENYP 47
          M++ +VI+  + L         +   K+                 L+D  +   I     
Sbjct: 1  MKKIVVILLFSFLFIGCSSARKSLVKKIDSSINSDDYNNQFTGFLLVDIESRDTIYNVNS 60

Query: 48 DHPWNPASLTKLMTAYVVFS 67
             + PAS TK+ T Y    
Sbjct: 61 TKYFTPASNTKIFTLYTSLK 80


>gi|300773855|ref|ZP_07083724.1| possible peptidase S13, D-Ala-D-Ala carboxypeptidase C
          [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760026|gb|EFK56853.1| possible peptidase S13, D-Ala-D-Ala carboxypeptidase C
          [Sphingobacterium spiritivorum ATCC 33861]
          Length = 441

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 13/79 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFL-----------SIAETNKLPYY--TLLDTNTGHVIAENYP 47
          M+ +L    +++L  I P             S AE  K  +Y  +L D ++   +     
Sbjct: 5  MKLYLFSFFVSLLVYIMPVKGQISNDLQQKFSQAEGLKKHFYGFSLYDADSSRFLFGINE 64

Query: 48 DHPWNPASLTKLMTAYVVF 66
          +  + PAS TK+ T     
Sbjct: 65 EKHFMPASNTKIFTLLAAI 83


>gi|281335992|gb|ADA62553.1| CTX-M-79-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|74474870|dbj|BAE44423.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 290

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 57/203 (28%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I++        
Sbjct: 51  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAEKDLLSYAP 110

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 111 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSVTRNDRNEP 170

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A   A L+     +  Q     Q     I  +       A    
Sbjct: 171 DVNLFAKGDPRDTTSPAAMAASLARFAVGNGLQPASRQQFTDWLIDNQTGDACLRAGLGK 230

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 231 RWRVGDKTGSNGDDTRNDIAVLW 253


>gi|281335948|gb|ADA62531.1| CTX-M-22-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|269959868|ref|ZP_06174245.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835167|gb|EEZ89249.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 283

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 78/252 (30%), Gaps = 11/252 (4%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWN 52
           M++ L++  + + S+      + E               ++ DT T     +   D  + 
Sbjct: 1   MKKLLLLFGLVVCSSATYAAKLNEDLASIEEHISGRLGVSVWDTQTDEK-WDYRGDERFP 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K +    +   +  +K        + +              G T  +++A +  +
Sbjct: 60  MMSTFKTLACATMLKDMDSEKLDKNATAKVEERNMVVWSPVMDRMAGQTTRIEHACEAAM 119

Query: 113 VKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + S N  A  +  S+       +F++ + + +  L         A    +    T    +
Sbjct: 120 LMSDNTAANIVLRSIGGPHGVTRFLRSIGDKATRLDRFEPRLNEAKPGDKQDTTTPNTMV 179

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L   ++ D   Y    Q+K      K   +   +V     +   ++G        I A
Sbjct: 180 NTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGAGGFGSRGITA 239

Query: 231 SAIQGDQSLIAV 242
              + +   + +
Sbjct: 240 MIWKENHKPVYI 251


>gi|30140337|emb|CAD89606.1| beta-lactamase CTX-M-32 [Escherichia coli]
 gi|119926023|emb|CAM06581.1| extended-spectrum beta-lactamase CTX-M-32 [Proteus mirabilis]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|9910659|sp|P96348|BLA6_KLEPN RecName: Full=Beta-lactamase SHV-6; Flags: Precursor
 gi|1871549|emb|CAA71948.1| beta-lactamase class A [Klebsiella pneumoniae]
          Length = 260

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 35  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 94

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 95  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 154

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 155 LNEALPGDARATTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAG 214

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                KTG            A +     I  +LG  ++  R
Sbjct: 215 WFIADKTG------------AGERGARGIVALLGPNNKAER 243


>gi|281335974|gb|ADA62544.1| CTX-M-1-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|227539713|ref|ZP_03969762.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Sphingobacterium
          spiritivorum ATCC 33300]
 gi|227240355|gb|EEI90370.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Sphingobacterium
          spiritivorum ATCC 33300]
          Length = 450

 Score = 46.1 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 13/79 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFL-----------SIAETNKLPYY--TLLDTNTGHVIAENYP 47
          M+ +L    +++L  I P             S AE  K  +Y  +L D ++   +     
Sbjct: 14 MKLYLFSFFVSLLVYIMPVKGQISNDLQQKFSQAEGLKKHFYGFSLYDADSSRFLFGINE 73

Query: 48 DHPWNPASLTKLMTAYVVF 66
          +  + PAS TK+ T     
Sbjct: 74 EKHFMPASNTKIFTLLAAI 92


>gi|110630023|gb|ABG80523.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|113374282|gb|ABI34705.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|156447585|gb|ABU63585.1| beta-lactamase CTX-M-57 [Shigella sonnei]
 gi|164665318|gb|ABY66121.1| CTX-m-15-like beta-lactamase [Escherichia coli]
 gi|256576424|gb|ACU87986.1| extended-spectrum beta-lactamase CTX-M-55 [Escherichia coli]
 gi|256576428|gb|ACU87988.1| extended-spectrum beta-lactamase CTX-M-55 [Escherichia coli]
 gi|256576432|gb|ACU87990.1| extended-spectrum beta-lactamase CTX-M-55 [Escherichia coli]
 gi|282192942|gb|ADA81874.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|302347801|gb|ADL27910.1| beta-lactamase CTX-M-55 [Escherichia coli]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|281335966|gb|ADA62540.1| CTX-M-57-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|332669074|ref|YP_004452082.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Cellulomonas fimi ATCC 484]
 gi|332338112|gb|AEE44695.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Cellulomonas fimi ATCC 484]
          Length = 470

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + A+   +   ++           + D  TG V+A +  D    PAS  KL+TA     
Sbjct: 75  SAALQGLVDGLVADPRMGPSVGVVVADQLTGEVLASHLADQGRTPASTAKLVTAVAALQ 133


>gi|320333944|ref|YP_004170655.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Deinococcus maricopensis DSM 21211]
 gi|319755233|gb|ADV66990.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Deinococcus maricopensis DSM 21211]
          Length = 419

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 18  PFLSIAETNKLPY-YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
              +  +         +LD +TG  + E  PD  + PAS+ KL +   V   L       
Sbjct: 36  ALNAALDRANAHAGALVLDADTGETLYERAPDDAFTPASVRKLFSMSAVLYTLGAGYWFS 95

Query: 77  TTPITISKNASEYPPS 92
           T     + +A+ + P 
Sbjct: 96  TDVTGPTPDANGHVPR 111


>gi|308175884|ref|YP_003915290.1| serine-type D-Ala-D-Ala carboxypeptidase [Arthrobacter arilaitensis
           Re117]
 gi|307743347|emb|CBT74319.1| putative serine-type D-Ala-D-Ala carboxypeptidase [Arthrobacter
           arilaitensis Re117]
          Length = 454

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             + +++   L+           ++D  TG+V+ +   +    PAS  K++TA      
Sbjct: 68  AVLTASLDAILADKSDKTSFNAQVVDVATGNVLYDRNSEINGTPASSLKVVTAIAALDA 126


>gi|229823495|ref|ZP_04449564.1| hypothetical protein GCWU000282_00793 [Catonella morbi ATCC 51271]
 gi|229786939|gb|EEP23053.1| hypothetical protein GCWU000282_00793 [Catonella morbi ATCC 51271]
          Length = 579

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 10/227 (4%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPSNSTFKKGSTMTLDN 106
           +  + PAS  K+     ++   KE K   +  + +   N        +    G+  +LD 
Sbjct: 345 NQIFFPASTQKIYVLTELYRQYKEGKLQPSQTMAMEGSNIVPGAGHINESPAGTVYSLDE 404

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN-AHGVVQHGHYT 165
            +  + + S N  A  + E++          +   +  LG+  T+     +        T
Sbjct: 405 LVDYVAIYSDNTAANMLIEAV-----GGGGIVTQHAHELGMLDTYLEGKYYQTDNGRFQT 459

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
           T  + A L  ++         +  +   +++   +         +      K+G      
Sbjct: 460 TPDNAARLFAKLANHELNGEPWDSMLIDKLRLNSHS--FLRTYLYETDSWNKSGLGAPEQ 517

Query: 226 FNIVASAIQGDQSLIAVILGA-LDRNTRNKVSASLLSMGFYNKTDRK 271
            ++     Q     IAV   +  D + R      L    +      +
Sbjct: 518 NDVATFVTQYGSYSIAVYTNSWNDYDARFDQVGRLSQRVYEAFNQIR 564


>gi|8469128|sp|O33807|BLC4_SALTY RecName: Full=Beta-lactamase CTX-M-4; AltName: Full=Cefotaximase 4;
           Flags: Precursor
 gi|2462701|emb|CAA74573.1| beta lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I  +        + 
Sbjct: 56  ADNSQILYV--ADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIRASDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAGALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A         T       L               Q+            +  A       
Sbjct: 174 SAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGMPKSWG 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 234 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDILAAAAKIVTHGF 291


>gi|254967224|gb|ACT97668.1| TEM-1d beta-lactamase [mixed culture bacterium PI_gF3SD01_30]
          Length = 128

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 36/118 (30%), Gaps = 11/118 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             S  K++    V S +   +  L   I  S+N      ++              ++ 
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYFTSHRKASYGWHDSKRIMQC 123


>gi|808967|emb|CAA25532.1| unnamed protein product [Escherichia coli]
          Length = 113

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 185 MHYFQIKGLEIKGKKYPNTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                          + NTN  V          KTGFT A+G  +V   +  ++ +  V+
Sbjct: 1   REDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVV 60

Query: 244 LGALDRNTRNKVSASLLSM 262
           + A  + T    ++ L + 
Sbjct: 61  MDAFGKYTHFADASRLRTW 79


>gi|289667228|ref|ZP_06488303.1| beta lactamase [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 297

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 65/228 (28%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   D  +   S  K + A  V   + + K ML   + I  +       
Sbjct: 55  LLDSATGWHLGQRQ-DERFPMCSTFKFVLAAAVLQRVDQGKLMLAQRVKIRASDMLEYAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHIGGSLSVGELCRATMIYSDNPAANLLFPLVGDPAGVTAFLRSIGDAQTCSDRHEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A     L   +  D  +     Q+    I  +   +   A  T 
Sbjct: 174 DMNRFAAGDPRDTTTPAAMANTLRTLLLGDALRPASRKQLTDWMINNRTGDDCLRAGLTR 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L         + 
Sbjct: 234 DWKIGDKTGSNGIDTRNDIAILWPPKGRAPLLLTAYLNGAKVEDAARD 281


>gi|229196713|ref|ZP_04323456.1| Beta-lactamase [Bacillus cereus m1293]
 gi|228586788|gb|EEK44863.1| Beta-lactamase [Bacillus cereus m1293]
          Length = 332

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 95  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 151

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 152 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 211

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 212 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 271

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 272 WVVGDKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 316


>gi|197724606|emb|CAP12358.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 72/270 (26%), Gaps = 14/270 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWNP 53
           R  L+ +  A+   +F      E  K+          Y  +D  +G  +A       +  
Sbjct: 5   RLCLISLIAALPLAVFASPQPLEQIKISEGQLAGRVGYVEMDLASGRTLAAWRASERFPL 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++    V + +      L   I   +         S       MT+       I 
Sbjct: 65  MSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAIT 124

Query: 114 KSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            S N     +            F++ + +    L    T    A         T A    
Sbjct: 125 MSDNSAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAT 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L   + T         Q+    +  +       AV         KTG        IVA 
Sbjct: 185 TLRKLLTTPSLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRGIVAL 244

Query: 232 AIQGDQ--SLIAVILG--ALDRNTRNKVSA 257
                +   ++ + L   A     RN+  A
Sbjct: 245 LGPDGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|166713005|ref|ZP_02244212.1| beta lactamase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 313

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 66/228 (28%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L D+ TG  + +   D  +   S  K + A  V   + + K  LT  + I  +       
Sbjct: 55  LFDSATGWRLGQR-EDERFPMCSTFKFVLAAAVLQRVDQGKLTLTQRVKIRASDMLEHAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHVGGSLSVGELCRATMIYSDNPAANVLFPLVGDPAGLTGFLRGIGDAQTRSDRYEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D  Q     Q+    I  +   +   A  T 
Sbjct: 174 EMNRFAAGDPRDTTTPAAMAATLRTLLLGDALQPSSRTQLTDWMIDNRTGDDCLRAGLTR 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L     +   + 
Sbjct: 234 EWKIGDKTGSNGTDTRNDIAILWPPKGRAPLLLTTYLNGAKVDDAARD 281


>gi|281335962|gb|ADA62538.1| CTX-M-32-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|255017615|ref|ZP_05289741.1| hypothetical protein LmonF_07370 [Listeria monocytogenes FSL
           F2-515]
          Length = 77

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 189 QIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALD 248
           +      KG K  +TN ++G+  G DG+KTGFT  +G+  + +A +G + +I+++L A  
Sbjct: 13  KPTVTTDKGAKLESTNDSLGSIQGLDGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGT 72

Query: 249 RNT 251
              
Sbjct: 73  AEK 75


>gi|311895702|dbj|BAJ28110.1| putative D-alanyl-D-alanine carboxypeptidase precursor
          [Kitasatospora setae KM-6054]
          Length = 529

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 10 MAMLSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          +A+ +++   L+ +          +LD  TG V+    P     PAS  K +T      
Sbjct: 41 VALTADLDALLADSRLANAQTGVEVLDAATGQVLYARQPQALLTPASTLKTVTTAAALD 99


>gi|291445686|ref|ZP_06585076.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
 gi|291348633|gb|EFE75537.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
          Length = 458

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             A+   + P +           +++DT TG  +       P  PAS  K+ TA    
Sbjct: 78  TAALRDTLAPLIGDPGLGDKVAASVIDTATGEQLYGQGATTPMTPASTIKIATATAAL 135


>gi|239942231|ref|ZP_04694168.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
          Length = 491

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 21/58 (36%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             A+   + P +           +++DT TG  +       P  PAS  K+ TA    
Sbjct: 111 TAALRDTLAPLIGDPGLGDKVAASVIDTATGEQLYGQGATTPMTPASTIKIATATAAL 168


>gi|288576342|ref|ZP_05978622.2| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria mucosa ATCC 25996]
 gi|288565699|gb|EFC87259.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria mucosa ATCC 25996]
          Length = 480

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 9  AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             M  + +               + + ++G VI  +  D   NPAS  KL+TA+  F  
Sbjct: 23 LCLMPFSAYALNLGNIPPDEISVYVQELDSGKVIESHRADASVNPASTMKLVTAFSAFEA 82


>gi|166344061|gb|ABY86753.1| beta-lactamase CTX-M1 [Escherichia coli]
          Length = 271

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 64/242 (26%), Gaps = 19/242 (7%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M    V    + +  +L   + I K+        + 
Sbjct: 36  ADNSQILY--RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 93

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 94  KHVDGTMSLAELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLN 153

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 154 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 209

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A     D+  LI V         A  R      +A +++ 
Sbjct: 210 ASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTN 269

Query: 263 GF 264
           G 
Sbjct: 270 GL 271


>gi|251981|gb|AAB22638.1| beta-lactamase, penicillin amido-beta-lactam hydrolase {EC 3.5.2.6}
           [Escherichia coli, strain MEN-1, Peptide Plasmid, 263
           aa]
          Length = 263

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 64/242 (26%), Gaps = 19/242 (7%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M    V    + +  +L   + I K+        + 
Sbjct: 28  ADNSQILY--RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 85

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 86  KHVDGTMSLAELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLN 145

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 146 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A     D+  LI V         A  R      +A +++ 
Sbjct: 202 ASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTN 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|126256518|gb|ABO09821.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|205362238|gb|ACI03938.1| CTX-M-79 beta-lactamase [Escherichia coli]
 gi|281335920|gb|ADA62517.1| CTX-M-79 beta-lactamase [synthetic construct]
          Length = 291

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|307331150|ref|ZP_07610277.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Streptomyces violaceusniger Tu 4113]
 gi|306883230|gb|EFN14289.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Streptomyces violaceusniger Tu 4113]
          Length = 524

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 28 LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
               + D ++G  +  +  D    PAS TKL T+    
Sbjct: 56 AAGVVVADADSGAALYRHRADDRLMPASNTKLFTSAAAM 94


>gi|75764732|ref|ZP_00744138.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74487777|gb|EAO51587.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 47

 Score = 46.1 bits (107), Expect = 0.008,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 13/45 (28%)

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRK 271
            +     +     I+V++       R   +  L   GF N     
Sbjct: 1   MLYWYGERNAMRFISVVIKTSSHTARFDETKKLYDYGFANFGSET 45


>gi|313766534|gb|ADR80609.1| SHV-122 beta-lactamase [Klebsiella pneumoniae]
          Length = 287

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 68/271 (25%), Gaps = 36/271 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN----KLPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +      +             +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------VQH 161
             I  S N  A  +  ++          +    + +G + T      G            
Sbjct: 121 AAITMSDNSAANLLLATV-----GGPAGLTAFLRQIGDNVTRLDPPGGTELNEALPGDAR 175

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              T A   A L   + +         Q+    +  +       +V         KTG  
Sbjct: 176 DTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-- 233

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                     A +     I  +LG  ++  R
Sbjct: 234 ----------AGERGARGIVALLGPNNKAER 254


>gi|160871813|ref|ZP_02061945.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rickettsiella grylli]
 gi|159120612|gb|EDP45950.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rickettsiella grylli]
          Length = 497

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +TG +I +   +  + PAS  KL T      +
Sbjct: 69  LSTGKIIYQYNANRRFIPASTLKLFTGIAALEY 101


>gi|229011761|ref|ZP_04168943.1| Beta-lactamase [Bacillus mycoides DSM 2048]
 gi|228749558|gb|EEL99401.1| Beta-lactamase [Bacillus mycoides DSM 2048]
          Length = 348

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 62/230 (26%), Gaps = 7/230 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      +   L   IT +K+        
Sbjct: 111 IDTGTNRTIAYR-PNERFAFASTYKALAAGVLLQQNSTE--KLNEVITYTKDDLVEYSPV 167

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +           
Sbjct: 168 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMADRFEPE 227

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 228 LNEATPGDIRDTSTAKAIATNLKAFTVGNALPADKRKILTEWMKGNATGDKLIRAGVPTD 287

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSASLL 260
              G K+G       N +A     ++  +I  IL + D          L+
Sbjct: 288 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD-NKLI 336


>gi|308233897|ref|ZP_07664634.1| D-alanyl-D-alanine carboxypeptidase [Atopobium vaginae DSM 15829]
 gi|328943375|ref|ZP_08240840.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Atopobium vaginae DSM 15829]
 gi|327491344|gb|EGF23118.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Atopobium vaginae DSM 15829]
          Length = 315

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 74/255 (29%), Gaps = 26/255 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               +++ D N    +           ASL+KL       S        L      +   
Sbjct: 61  DALAFSVYDMNANTYLFYEGAGQEPTVASLSKLFAIDYALSK-----VKLDDVFEANDET 115

Query: 87  SE--YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKK 133
            +     S+       T T    ++ ++V S ND A  +A ++            +    
Sbjct: 116 LKLVPAGSSMANLTRGTYTAKQIMQAMLVPSGNDAAYVMAYNIGKMDLGAGHSAKEYINH 175

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           FV+ +       G   T   +  G              +    +  DF +         +
Sbjct: 176 FVKSLRTYLAREGYGKTDLYDPSGFSMQATTNLDDINRVTLKLLDYDFVKECMGESSFTI 235

Query: 194 EIKGKKYPNTNWAVGTFL-------GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
             K   +   N                 G+KTG T AS +NI+A      +  + + L A
Sbjct: 236 TTKQGNFTWKNTNEFLDKESLFYNRYIKGVKTG-TFASSYNIIALYENNGKRYLIICLAA 294

Query: 247 LDRNTRNKVSASLLS 261
                R +   + ++
Sbjct: 295 HSNKDRYQAVQAAIN 309


>gi|239988697|ref|ZP_04709361.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
          Length = 474

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            + P +           +++DT TG  +       P  PAS  K+ TA    
Sbjct: 100 TLAPLIGDPGLGDKVAASVIDTATGEQLYGQGATTPMTPASTIKIATATAAL 151


>gi|300778859|ref|ZP_07088717.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Chryseobacterium gleum ATCC 35910]
 gi|300504369|gb|EFK35509.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Chryseobacterium gleum ATCC 35910]
          Length = 489

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 21/50 (42%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            + D  T  VI+    + P  PAS TKL+T     + L E    +T    
Sbjct: 83  VVYDPKTKKVISSYNENTPLVPASTTKLLTTETALNMLGENYRWMTQLEY 132


>gi|133919284|emb|CAM12805.1| class A beta-lactamase [Leminorella richardii]
          Length = 295

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 62/211 (29%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +    +L+      K+ S+    N  
Sbjct: 60  ADNSQIVY--RGDERFAMCSTSKVMAAAAVLKQSETDSRVLSKKRCDYKSRSDQLEPNCQ 117

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
              G+ MTL       +  S N     I   L   EK   F + + +T+  L  +     
Sbjct: 118 EALGAGMTLAEMSAATLQYSDNTAMNKILTHLGGPEKVTAFARSIGDTTYRLDRTEPALN 177

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A         T       L      +        Q+            +  A       
Sbjct: 178 SALPGDPRDTTTPLAMAKSLRSLTLDNALGETQRAQLVEWMKGNTTGDASIRAGLPKNWI 237

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     ++  LI V 
Sbjct: 238 VGDKTGSGDYGTTNDIAVIWPENRAPLILVT 268


>gi|226225919|ref|YP_002760025.1| D-alanyl-D-alanine carboxypeptidase [Gemmatimonas aurantiaca T-27]
 gi|226089110|dbj|BAH37555.1| D-alanyl-D-alanine carboxypeptidase [Gemmatimonas aurantiaca T-27]
          Length = 545

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
              ++  + G  +     D P  PAS  KL T+ + F  L  + 
Sbjct: 110 GAIVVSISRGDTLFARGADAPMVPASTMKLFTSAIAFEKLGPEH 153


>gi|220683460|gb|ACL80551.1| TEM beta-lactamase [Salmonella enterica subsp. enterica serovar
           Enteritidis]
 gi|220683462|gb|ACL80552.1| TEM beta-lactamase [Salmonella enterica subsp. enterica serovar
           Bonn]
          Length = 103

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 33/94 (35%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  LD N+G ++    P+  +   S  K++    V S +   +  L   I  S+N    
Sbjct: 3   GYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE 62

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
               +       MT+       I  S N  A  +
Sbjct: 63  YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLL 96


>gi|327439633|dbj|BAK15998.1| beta-lactamase class A [Solibacillus silvestris StLB046]
          Length = 261

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 76/233 (32%), Gaps = 12/233 (5%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           +  + D  T  ++ +N  +  ++ AS+ K+     + + L++    L     I+   +  
Sbjct: 17  HVIVEDYKTNEIVWKNRAEEIFSSASIIKVPILIAILAHLQKTNGSLNQVFKIAPE-NMV 75

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             S  T +K    TL   L  + + S N       + L       +   N+    +GL  
Sbjct: 76  DFSVITEQKQIRATLHELLLWMTITSDNTATNVCIDLL------GMDAFNDYFNEIGLHN 129

Query: 150 THFMNAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           T         +       + TTA+DM  L  +I         +  +    +  ++   + 
Sbjct: 130 TRVQRKMMDFERQKLGFDNVTTAQDMQQLFRKIYRGTLLTSEWNAVALDILSRQRSHESL 189

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
                       KTG       +     ++     I V +  +  N + + + 
Sbjct: 190 KRYIADDVKMAHKTGGLDTVDHDTGIVFLEVRDYFIGVFITEVTDNDKARQTI 242


>gi|313835714|gb|EFS73428.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL037PA2]
 gi|314928386|gb|EFS92217.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL044PA1]
 gi|314970192|gb|EFT14290.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL037PA3]
 gi|328908033|gb|EGG27792.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium sp. P08]
          Length = 456

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A A+ + +    +           ++D  TG  + ++  D    PAS  K++TA  +  
Sbjct: 70  VAAAIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQDSFLTPASNLKVLTAIALLD 126

Query: 68  FLKEKK 73
                 
Sbjct: 127 CTDAGH 132


>gi|256419859|ref|YP_003120512.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Chitinophaga pinensis
           DSM 2588]
 gi|256034767|gb|ACU58311.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Chitinophaga pinensis
           DSM 2588]
          Length = 440

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 60/252 (23%), Gaps = 18/252 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI----------------AETNKLPYYT-LLDTNTGHVIA 43
           MR F ++++  +L +    ++                 A   +      + +  TG    
Sbjct: 1   MRSFRIVLSACLLLSFIKPVAAQYGPIRKWAEEELLTSAPLKQAHTGISIYEPATGKYWY 60

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               DH + PAS TK+ T Y     L +    L    T S    +     +       + 
Sbjct: 61  NYQEDHYFTPASNTKIFTLYTGLRLLGDSLPALRYFRTDSALYVKGMADPAFLHPDYNVQ 120

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG-LSATHFMNAHGVVQHG 162
               L     +    +  AI      +   +  + +     L        +         
Sbjct: 121 PAWQLLQQASQPIVLVPAAIENKRFGSGWAWSDYADYYQPELNEWPVYGNVARVRHHGDS 180

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
                R              +       +   I                G     TG + 
Sbjct: 181 TLIWPRMFNDTVHFSVHRNDKLEELLTERDERINRFSVTYNGNDKSVQEGEIPFITGGSD 240

Query: 223 ASGFNIVASAIQ 234
              + +  +  +
Sbjct: 241 DLVYRLQDTLHK 252


>gi|78063696|ref|YP_373604.1| Beta-lactamase [Burkholderia sp. 383]
 gi|77971581|gb|ABB12960.1| Beta-lactamase [Burkholderia sp. 383]
          Length = 269

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 63/265 (23%), Gaps = 20/265 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-YPDHPWNPASLTKL 59
           M+ +   +       +    S A         + D  TG V+ +         PAS  K+
Sbjct: 1   MKHWRRALFTFAAGLLAASTSHARPICT---VVADAATGQVLVQQGDCATRVTPASTFKV 57

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
             + + F     K     TP                 +                +     
Sbjct: 58  AISLMGFDAGVLK--DAHTPTLDFHAGYPDWGGAPWREPTDPARWMKLSVFWYSQQVTQA 115

Query: 120 A--VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                +   +  G+       +  +         R +A  +  +
Sbjct: 116 LGQARFQRYTNAFGYGNADVTSQQGELNGVMGAWVNASLRISPLEQVGFMRKIANRTLPV 175

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                       +   +  G           T  G+ G K   + A G+  V  A +G +
Sbjct: 176 SAHAFDMTERITLIDTQPDGWVVH-----GKTGTGSPGRKYDASHAYGW-FVGWAAKGPR 229

Query: 238 SLIAVILGALDRNT------RNKVS 256
            L+   L   D+        R + +
Sbjct: 230 KLVFAYLMQDDKRQTPNAGLRARDT 254


>gi|82655082|emb|CAJ19610.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 45.7 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 73/270 (27%), Gaps = 14/270 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWNP 53
           R  L+ +  A+   +F      E  K+          Y  +D  +G  +A       +  
Sbjct: 5   RLCLISLIAALPLAVFASPQPLEQIKISEGQLAGRVGYVEMDLASGRTLAAWRASERFPL 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++    V + +      L   I   +         S       MT+       I 
Sbjct: 65  MSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAIT 124

Query: 114 KSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            S N     + +          F++ + +    L    T    A         T A    
Sbjct: 125 MSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAT 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L   + T         Q+    +  +       AV         KTG        IVA 
Sbjct: 185 TLRKLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVAL 244

Query: 232 AIQGDQ--SLIAVILG--ALDRNTRNKVSA 257
                +   ++ + L   A     RN+  A
Sbjct: 245 LGPDGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|313894580|ref|ZP_07828143.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313440770|gb|EFR59199.1| conserved hypothetical protein [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 272

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 67/233 (28%), Gaps = 13/233 (5%)

Query: 30  YYTLL---DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
            Y +L   D     +IA        + ASL K++    VF   + ++  L   + +SK  
Sbjct: 28  SYVVLQFDDEEEPTLIASRGEHTVHSSASLIKVLIMEYVFHLARAEQLDLNDTVPLSKTP 87

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                       G        L  L++  +++IA  +  ++       ++++N  ++ LG
Sbjct: 88  RVEGGGALQELVGKHSFTYLELCRLMMVLSDNIATNLLITVL-----GMENINARAEKLG 142

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY---FQIKGLEIKGKKYPNT 203
           +                      M  ++                +  +   I G++    
Sbjct: 143 VDEIELNRMMMDFDALAEGRDNHMTAMALARLYKHIFEYRDRDAYGCEMWNILGRQQFRD 202

Query: 204 NWAVGTFLGA-DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                   G     KT        +              ++L +   N R K 
Sbjct: 203 ILPFYWGEGIRFHHKTASLDRVEHDGGVLETLRGH-FCFILLMSDIDNDRGKE 254


>gi|302331468|gb|ADL21662.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis 1002]
          Length = 394

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              + D  TG V+     +    PAS TKL+TA      
Sbjct: 71  GAMITDITTGEVVLSQNAEVALTPASSTKLLTAAAALYE 109


>gi|302206901|gb|ADL11243.1| D-Ala-D-Ala carboxypeptidase 3 (S13) [Corynebacterium
           pseudotuberculosis C231]
 gi|308277155|gb|ADO27054.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis I19]
          Length = 417

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              + D  TG V+     +    PAS TKL+TA      
Sbjct: 94  GAMITDITTGEVVLSQNAEVALTPASSTKLLTAAAALYE 132


>gi|300859212|ref|YP_003784195.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686666|gb|ADK29588.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           pseudotuberculosis FRC41]
          Length = 417

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              + D  TG V+     +    PAS TKL+TA      
Sbjct: 94  GAMITDITTGEVVLSQNAEVALTPASSTKLLTAAAALYE 132


>gi|134133899|gb|ABO61007.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 298

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  +  +  D  +   S  K M A  V S  +   A+L   + +          
Sbjct: 57  LLDTASGRRL-GHRQDERFPMCSTFKSMLAATVLSQAERAPALLDRRVPVRDADLLSHAP 115

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  ++ S N  A  +            F++   +T         
Sbjct: 116 VTRRHAGKDMTVRDLCRATVITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 175

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  D  Q     Q+    I  +       A    
Sbjct: 176 EMNSFAEGDPRDTTTPAAMAATLQRVVLGDVLQPASRQQLSDWLIDNETGDACLRAGLGK 235

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 236 RWRVGDKTGSNGEDARNDIAVLW 258


>gi|229133410|ref|ZP_04262238.1| Beta-lactamase [Bacillus cereus BDRD-ST196]
 gi|228650083|gb|EEL06090.1| Beta-lactamase [Bacillus cereus BDRD-ST196]
          Length = 348

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 64/230 (27%), Gaps = 7/230 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      +   L   IT +K+        
Sbjct: 111 IDTGTNRTIAYR-PNERFAFASTYKALAAGVLLQQNSTE--KLNEVITYTKDDLVEYSPV 167

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 168 TEKHVDTGMTLGQIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMADRFETE 227

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               +     
Sbjct: 228 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPADKRKILTEWMKGNATGDKLIRSGVPTD 287

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSASLL 260
              G K+G       N +A     ++  +I  IL + D          L+
Sbjct: 288 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD-NKLI 336


>gi|159903676|ref|YP_001551020.1| Beta-lactamase class A [Prochlorococcus marinus str. MIT 9211]
 gi|159888852|gb|ABX09066.1| Beta-lactamase class A [Prochlorococcus marinus str. MIT 9211]
          Length = 356

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 9/152 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             ++  Y L +   G   A+   +     AS  K+   ++    L + K      I ++K
Sbjct: 98  DLEVSAYILFE--DGR-YAQFNAEKSLPSASTIKIAILFLSLEMLDDGKLRWDEEIELTK 154

Query: 85  NASEYPPSNSTFK-KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +         ++  G    +      +I  S N  A  + E +       +  +N   K
Sbjct: 155 ESIAKGAGWMRYQSLGKKFPIHEITTEMIRVSDNTAANLLIERV-----GGLDILNKRFK 209

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
            LGL  T   +    +   + T+A+D++ +  
Sbjct: 210 ELGLMQTEINSLLPDLSGTNKTSAKDLSKIMK 241


>gi|124263632|gb|ABM97538.1| beta-lactamase [Escherichia coli]
          Length = 291

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTETTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|47569549|ref|ZP_00240228.1| beta-lactamase [Bacillus cereus G9241]
 gi|47553805|gb|EAL12177.1| beta-lactamase [Bacillus cereus G9241]
          Length = 301

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 57/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 64  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 120

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N             K  +K ++ M +         T 
Sbjct: 121 TEKHVDTGMKLGEIAEAAVRYSDNTAGNILFHKIGGPKGFEKALRKMGDRVTMSDRFETE 180

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 181 LNEAIPGDIRDTSTAKAIARNLKDFTIGNALPHQKRNILTDWMKGNATGDKLIRAGVPTD 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 241 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 285


>gi|254967195|gb|ACT97650.1| TEM-1d beta-lactamase [mixed culture bacterium PE_gF3SD01_22]
          Length = 128

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 11/118 (9%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
             S  K++    V S +   +  L   I  S+N        +       MT+   ++ 
Sbjct: 66  MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVREYMQC 123


>gi|163748948|ref|ZP_02156199.1| penicillin-binding protein 4 [Shewanella benthica KT99]
 gi|161331324|gb|EDQ02212.1| penicillin-binding protein 4 [Shewanella benthica KT99]
          Length = 486

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 24 ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            +        +  TG +I E  PD    PAS  KL+TA   
Sbjct: 33 PPHSHTAIFATNLVTGDIIFEQNPDTLLLPASTMKLLTAVAA 74


>gi|82408911|gb|ABB73249.1| beta-lactamase PLA-6 [Raoultella planticola]
          Length = 291

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A    D  +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLAGYRSDERFPMMSTFKVLLCGAVLSRVDAGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLTDGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTSFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +V    
Sbjct: 165 LNEARPGDVRDTTTPQAMARTLRNLLTGSVLSSASQQQLQRWMVEDKVAGPLLRSVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GAL-DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L G     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTGTPATMDERNKQIAAI 276


>gi|228952860|ref|ZP_04114929.1| Beta-lactamase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228806816|gb|EEM53366.1| Beta-lactamase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 312

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIAMNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I VIL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIVILSSKDEKEATYD 296


>gi|229060183|ref|ZP_04197552.1| Beta-lactamase [Bacillus cereus AH603]
 gi|228719065|gb|EEL70677.1| Beta-lactamase [Bacillus cereus AH603]
          Length = 348

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+          L   IT +K+        
Sbjct: 111 IDTGTNRTIAYR-PNERFAFASTYKALAAGVLLQQNSID--KLNEVITYTKDDLVEYSPI 167

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +           
Sbjct: 168 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRITMADRFEPE 227

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 228 LNEATPGDIRDTSTAKAIATNLKAFTVGNALPAHKRNILTEWMKGNATGDKLIRAGVPTD 287

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 288 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 332


>gi|226311564|ref|YP_002771458.1| hypothetical protein BBR47_19770 [Brevibacillus brevis NBRC 100599]
 gi|226094512|dbj|BAH42954.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 270

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 82/270 (30%), Gaps = 12/270 (4%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLL--DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           MLS++F  +S    +    + +   D  TG  +     D  +  AS+ K+     VF+  
Sbjct: 1   MLSSLFAQISSLIKDAGGEWGIFFEDLQTGETL-SINEDQRFYAASVIKIPIMTAVFAEA 59

Query: 70  KEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--S 126
              K      I + + +             G+  T+ + + L+I++S N     + +   
Sbjct: 60  YAGKFAFEDKIKLRTDDLVGGAGVLQHMTPGTEFTIRDLVTLMIIQSDNTATNMMIDLVG 119

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH 186
                    +     S+             G  +         +  L+      +   + 
Sbjct: 120 TESIRNAMQKTEMKNSQFHNKLMVVPAELEGYNEVTAKDMGSHLRYLATGKIISYDSCLK 179

Query: 187 YFQIKGLEIKGKKYPNTNWAVGTF------LGADGMKTGFTCASGFNIVASAIQGDQSLI 240
              I   +   ++ P                     KTG       ++    I      +
Sbjct: 180 MVAILKTQQHRERIPFLLPDPDGDVIGTIPKWEFANKTGSVTKITHDVGILYIGSHAVTL 239

Query: 241 AVILGALDRNTRNKVSASLLSMGFYNKTDR 270
           +++   L++     V A + ++ ++  + +
Sbjct: 240 SILNKGLEQKDAANVMAQIGNLVYHAYSQK 269


>gi|158312165|ref|YP_001504673.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. EAN1pec]
 gi|158107570|gb|ABW09767.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. EAN1pec]
          Length = 495

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
                P   ++D  TG V+  N P  P  PAS  K+
Sbjct: 73  PVLGGPATLVVDALTGQVLFANRPTEPTAPASTVKI 108


>gi|228921220|ref|ZP_04084549.1| Beta-lactamase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228838435|gb|EEM83747.1| Beta-lactamase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 312

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 60/229 (26%), Gaps = 6/229 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              ++DT T   I    P+  +  AS  K + A V+          L   IT +K     
Sbjct: 71  GVYVIDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVD 127

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGL 147
               +     + M L    +  +  S N     +       K  +K ++HM +       
Sbjct: 128 YSPVTEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDR 187

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
             T    A         T       L      +         +               A 
Sbjct: 188 FETELNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAG 247

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                  G K+G       N +A     ++  +I  IL + D       
Sbjct: 248 VPTDWVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|115027|sp|P16897|BLP4_PSEAE RecName: Full=Beta-lactamase PSE-4; AltName: Full=Beta-lactamase
           CARB-1; AltName: Full=Carbenicillinase 1; Flags:
           Precursor
 gi|15384484|gb|AAK96394.1|AF313471_2 PSE-4 beta-lactamase [Pseudomonas aeruginosa]
          Length = 288

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|126737404|ref|ZP_01753139.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Roseobacter sp. SK209-2-6]
 gi|126721989|gb|EBA18692.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Roseobacter sp. SK209-2-6]
          Length = 495

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 8  IAMAMLSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          IA+++ S     L      +      + D  +G ++  +  D    PAS+ K +TA    
Sbjct: 37 IALSVPSGGLKALLAEAGLRGQIACAVADAASGKLLEAHAGDMELPPASVAKALTALYAL 96

Query: 67 S 67
           
Sbjct: 97 D 97


>gi|18845080|gb|AAL79541.1|AF473577_1 beta-lactamase K1 [Klebsiella oxytoca]
 gi|60416701|emb|CAI43415.1| beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   LI V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLILVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|296128484|ref|YP_003635734.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Cellulomonas flavigena DSM 20109]
 gi|296020299|gb|ADG73535.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Cellulomonas flavigena DSM 20109]
          Length = 470

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           ++D  TG V+A + PD    PAS  K++T     + L  
Sbjct: 99  VVDQLTGEVLASHAPDEGLVPASTAKVLTGIAALTALDP 137


>gi|11095254|gb|AAG29813.1|AF275256_1 carbapenem-hydrolyzing class A beta-lactamase Sme-2 [Serratia
           marcescens]
          Length = 294

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 67/260 (25%), Gaps = 19/260 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYPD 48
           +    + ++ +  + F   +                         +DT +G+       D
Sbjct: 8   KTASFLFSVCLALSAFNAHANKSDAAAKQIKKLEEDFDGRIGVFAIDTGSGNT-FGYRSD 66

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K   A  V   +++KK  +   +       EY    +T  KGS MTL +  
Sbjct: 67  ERFPLCSSFKGFLAAAVLERVQQKKLDINQKVKYESRDLEYHSPITTKYKGSGMTLGDMA 126

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN---LGLSATHFMNAHGVVQHGHYT 165
              +  S N     I E      +   + M +   N   L         A    +    T
Sbjct: 127 SAALQYSDNGATNIIMERFLGGPEGMTKFMRSIGDNEFRLDRWELELNTAIPGDKRDTST 186

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCA 223
                  L+     +          +              A        G KTG      
Sbjct: 187 PKAVANSLNKLALGNVLNAKEKAIYQNWLKGNTTGDARIRASVPADWVVGDKTGSCGAYG 246

Query: 224 SGFNIVASAIQGDQSLIAVI 243
           +  +      +    LI  I
Sbjct: 247 TANDYAVIWPKNRAPLIVSI 266


>gi|126149281|dbj|BAF47413.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 256

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 62/202 (30%), Gaps = 3/202 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + + +        
Sbjct: 56  LLDTASGRRI-SHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAP 114

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 115 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 174

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 175 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 234

Query: 211 LGADGMKTGFTCASGFNIVASA 232
               G KTG       N +A A
Sbjct: 235 RWRVGDKTGSNGEDARNDIAVA 256


>gi|584849|sp|Q03170|BLP1_PSEAE RecName: Full=Beta-lactamase PSE-1; AltName: Full=Beta-lactamase
           CARB-2; AltName: Full=Carbenicillinase 2; Flags:
           Precursor
 gi|12719033|gb|AAK02055.1|AF261825_24 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|13940488|gb|AAK50386.1|AF313472_2 PSE-1/CARB-2 beta-lactamase [Pseudomonas aeruginosa]
 gi|47648|emb|CAA79480.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|151076|gb|AAA25741.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|4063857|gb|AAC98498.1| beta-lactamase Pse-1 precursor [Salmonella typhimurium DT104]
 gi|44894284|gb|AAS48663.1| PSE-1/CARB-2 beta-lactamase [Pseudomonas aeruginosa]
 gi|54303993|emb|CAH04650.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|76781023|gb|ABA54431.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|77562729|gb|ABB00019.1| PSE-1/CARB-2 beta-lactamase [Pseudomonas aeruginosa]
 gi|82400278|gb|ABB72857.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|82653449|emb|CAG23929.1| CARB-2/PSE-1 [Pseudomonas aeruginosa]
 gi|82880019|gb|ABB92631.1| CARB-8 beta-lactamase [Pseudomonas aeruginosa]
 gi|83627321|dbj|BAE54322.1| beta-lactamase [Escherichia coli]
 gi|87047967|gb|AAQ18906.2| beta-lactamase Pse-1 precursor [Salmonella typhimurium DT104]
 gi|88911230|gb|ABD58906.1| PSE-1 [Pseudomonas aeruginosa]
 gi|94960157|gb|ABF47920.1| beta-lactamase PSE-1 [Acinetobacter baumannii]
 gi|112216508|gb|ABI14023.1| beta-lactamase PSE-1 [Acinetobacter baumannii]
 gi|114147179|gb|ABI50466.1| BlaP1 [Klebsiella pneumoniae]
 gi|114147193|gb|ABI50479.1| BlaP1 [Klebsiella pneumoniae]
 gi|116119373|gb|ABJ80648.1| beta-lactamase PSE-1 [Pseudomonas aeruginosa]
 gi|117580234|dbj|BAF36545.1| PSE-1/CARB-2 beta-lactamase [Proteus mirabilis]
 gi|219664350|gb|ACL31204.1| PSE-1 [Pseudomonas aeruginosa]
 gi|226424708|gb|ACO53364.1| PSE-1/CARB-2 beta-lactamase [Pseudomonas aeruginosa]
 gi|242322377|emb|CAZ48630.1| beta-lactamase PSE-1 [Pseudomonas aeruginosa]
 gi|260400139|gb|ACX36848.1| CARB-8 beta-lactamase [Stenotrophomonas maltophilia]
 gi|293631834|gb|ADE59428.1| Bla-PSE1 [Salmonella enterica subsp. enterica serovar Havana]
 gi|320151865|gb|ADW23164.1| PSE-1/CARB-2 carbenicillinase [Pseudomonas aeruginosa]
 gi|325491829|gb|ADZ16826.1| beta-lactamase PSE-1 [Pseudomonas aeruginosa]
 gi|330885919|gb|AEC47401.1| beta-lactamase [Burkholderia cepacia]
 gi|330885936|gb|AEC47413.1| beta-lactamase [Pseudomonas putida]
          Length = 288

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|7243955|gb|AAB37395.2| SHV-5a [Klebsiella pneumoniae]
          Length = 285

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 68/265 (25%), Gaps = 26/265 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +   +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLAS-RTLTAWRADE 59

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 60  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 119

Query: 110 LLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N  A  +  ++        F++ + +    L    T    A         T A
Sbjct: 120 AAITMSDNSAANLLLRTVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPA 179

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       +V         KTG        
Sbjct: 180 SMAATLRNVLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-------- 231

Query: 228 IVASAIQGDQSLIAVILGALDRNTR 252
               A +     I  +LG  ++  R
Sbjct: 232 ----ASKRGARGIVALLGPNNKAER 252


>gi|19852070|gb|AAL99990.1|AF488377_1 CTX-M type beta-lactamase [Escherichia coli]
          Length = 291

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTETTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|56548638|gb|AAV93320.1| CTX-M-2-like beta-lactamase precursor [Kluyvera intermedia]
          Length = 276

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 50  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 107

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 108 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 167

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 168 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIQAGLPKSWV 227

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 228 VGDKTGSGDYGTTNDIAIIWPENHAPLVLVT 258


>gi|76057845|emb|CAG25813.2| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 45.7 bits (106), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 74/270 (27%), Gaps = 14/270 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWNP 53
           R  L+ +  A+   +F      E  K+          Y  +D  +G ++A       +  
Sbjct: 5   RLCLISLIAALPLAVFASPQPLEQIKISEGQLAGRVGYVEMDLASGRMLAAWRASERFPL 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++    V + +      L   I   +         S       MT+       I 
Sbjct: 65  MSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAIT 124

Query: 114 KSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            S N     + +          F++ + +    L    T    A         T A    
Sbjct: 125 MSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAT 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L   + T         Q+    +  +       AV         KTG        IVA 
Sbjct: 185 TLRKLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVAL 244

Query: 232 AIQGDQ--SLIAVILG--ALDRNTRNKVSA 257
                +   ++ + L   A     RN+  A
Sbjct: 245 LGPDGKAERIVVIYLRDTAATMAERNQQIA 274


>gi|219920907|emb|CAQ76631.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWRKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|22203991|gb|AAM92465.1| CARB-8 beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhi]
          Length = 288

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 80/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL++ ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLVFSLLIPSVVFASSSKFRQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + I I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTIEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGSKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNKKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|28493294|ref|NP_787455.1| serine-type D-Ala-D-Ala carboxypeptidase [Tropheryma whipplei str.
           Twist]
 gi|28476335|gb|AAO44424.1| serine-type D-Ala-D-Ala carboxypeptidase [Tropheryma whipplei str.
           Twist]
          Length = 313

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 15/222 (6%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN--- 106
               AS++K++ A ++    +   + L     I+ +  +     ++ K G +        
Sbjct: 81  KHPIASISKVILALMLIE--RYSLSELNDGPNITYDTEDVSFFRNSVKDGDSYAPVYAGL 138

Query: 107 --ALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
              LK  ++      A   A SL      K + +         GL  T    A G+    
Sbjct: 139 TLTLKQSLIPLMLPSANNYATSLVKHLYGKSYPKFAREWLDKNGLYNTDIYEASGLDD-R 197

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           + +TA ++ +L+ +  ++          +          NTN A+G   G DG+KTG + 
Sbjct: 198 NVSTADNLIVLAKKAYSNPVLRGIMRLKEASIPNIGLVRNTNKALGIN-GIDGIKTGSSP 256

Query: 223 ASGFNIVASA---IQGD-QSLIAVILGALDRNTRNKVSASLL 260
           A+  N++ +A    +     +  V        +      +LL
Sbjct: 257 AAKSNLLFTAAIKTKNGLIRIYGVFKTEKSYASLYGKLDTLL 298


>gi|261349303|gb|ACX71212.1| beta-lactamase IMI-3 [Enterobacter cloacae]
          Length = 292

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 68/265 (25%), Gaps = 16/265 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHPW 51
           R  ++ I+     + F   +    +++               LDT +G        +  +
Sbjct: 9   RIAILFISCLFSISFFSQANTKGIDEIKNLETDFNGRVGVYALDTGSGKS-FSYKANERF 67

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              S  K   A  V    ++ +  L   +  +  + E+    +T  K + M+L +     
Sbjct: 68  PLCSSFKGFLAAAVLKGSQDNQLNLNQIVNYNTRSLEFHSPITTKYKDNGMSLGDMAAAA 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMN---NTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           +  S N     I E      +   + M    +    L         A    +    T A 
Sbjct: 128 LQYSDNGATNIILERYIGGPEGMTKFMRSIGDEDFRLDRWELDLNTAIPGDERDTSTPAA 187

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCASGF 226
               L      +          +              A        G KTG      +  
Sbjct: 188 VAKSLKTLALGNILSEREKETYQTWLKGNTTGAARIRASVPSDWVVGDKTGSCGAYGTAN 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNT 251
           +      +    LI  +    +   
Sbjct: 248 DYAVVWPKNRAPLIISVYTTKNEKE 272


>gi|56463235|gb|AAV91759.1| beta-lactamase SHV [Escherichia coli]
          Length = 248

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 57/221 (25%), Gaps = 14/221 (6%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 20  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 79

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 80  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 139

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L   + +         Q+    +  +       +V    
Sbjct: 140 LNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVADRVAGPLIRSVLPAG 199

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                K G            A +     I  +LG  ++  R
Sbjct: 200 WFIADKPG------------ASKRGARGIVALLGPNNKADR 228


>gi|294666051|ref|ZP_06731312.1| beta-lactamase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292604191|gb|EFF47581.1| beta-lactamase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 297

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 66/228 (28%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   +  +   S  K + A  V   + + K  L   + I  +       
Sbjct: 55  LLDSATGKRLGQR-EEERFPMCSTFKFVLAAAVLQQVDQGKLTLAQQVKIHASDMLEHAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHVGGSLSIGELCRATMIYSDNPAANLLFPLVGDPAGVTAFLRGVGDAQTRTDRYEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D  Q     Q+    I  +   +   A  T 
Sbjct: 174 EMNRFAAGDPRDTTTPAAMAATLRTLLLGDALQPASRKQLTDWMIDNRTGDDCLRAGLTA 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L     +   + 
Sbjct: 234 GWKIGDKTGSNGTDTRNDIAILWPPKGRGPLLLTTYLNGAKVDDAARD 281


>gi|76781025|gb|ABA54432.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 288

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 75/256 (29%), Gaps = 19/256 (7%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKAELVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L            +      TT +
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGK-LGDLRDTTTPK 179

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCASGF 226
            +A    +            Q K      K     N              ++G       
Sbjct: 180 AIASTLNKFLFGSALS-EMNQKKLESWMVKNQVTGNLLRSVMPAGWNIADRSGAGGFGAR 238

Query: 227 NIVASAIQGDQSLIAV 242
           +I A      Q+ I V
Sbjct: 239 SITAVVWSEHQAPIIV 254


>gi|283806794|pdb|2WYX|A Chain A, Neutron Structure Of A Class A Beta-Lactamase  Toho-1
           E166a R274n R276n Triple Mutant
          Length = 256

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 24  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 81

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +A    
Sbjct: 82  KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTAPTLN 141

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 142 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 201

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 202 VGDKTGSGDYGTTNDIAVIWPENHAPLVLVT 232


>gi|23098817|ref|NP_692283.1| penicillin binding protein [Oceanobacillus iheyensis HTE831]
 gi|22777044|dbj|BAC13318.1| penicillin binding protein [Oceanobacillus iheyensis HTE831]
          Length = 459

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           +TG +   +  D   +PAS  K++TA      L    
Sbjct: 29 ADTGDIYFSHNGDIRLHPASNMKILTAVAALKILGPGY 66


>gi|261378256|ref|ZP_05982829.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria cinerea ATCC 14685]
 gi|269145338|gb|EEZ71756.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria cinerea ATCC 14685]
          Length = 469

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRADVPVNPASTMKLITAFTAFK 70


>gi|51891859|ref|YP_074550.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
 gi|51855548|dbj|BAD39706.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
          Length = 259

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 50/233 (21%), Gaps = 22/233 (9%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L D  TG     +  D  ++PAS  K+  A       +  K      I  +      
Sbjct: 9   SVALEDLLTGQR-WLHNADRLYHPASTVKVPVALYALEQYRAGKIGWGDLIEYT------ 61

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                   +                        +             +M       G   
Sbjct: 62  --------EADVEPPLTGAFEAAEFGDLYPVQDLVHWALAYSDNVAVNMLGRRLGWGNIE 113

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG---KKYPNTNWA 206
                  G + H           +    +      +   +   L ++      Y     A
Sbjct: 114 RWTETIGGRLTHEDRLPRASALSVLQWWRHLHVLSLEDPERASLIVRPLLAATYRGRITA 173

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL--GALDRNTRNKVSA 257
                     K G    S     ++ +   +  I V+L  GA        ++ 
Sbjct: 174 GLPDGVPHMHKHGSYEGSYH--DSAIVYATRPYILVVLTEGAPLEEADAAIAR 224


>gi|1245355|gb|AAA93461.1| IMI-1 [Enterobacter cloacae]
          Length = 292

 Score = 45.7 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 67/265 (25%), Gaps = 17/265 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENYPDHPW 51
           +  ++ +  ++S  F   +  +                    LDT +G        +  +
Sbjct: 9   RIAILFSSCLVSISFFSQANTKGIDEIKDLETDFNGRIGVYALDTGSGKS-FSYKANERF 67

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              S  K   A  V    ++ +  L   +  +  + E+    +T  K + M+L +     
Sbjct: 68  PLCSSFKGFLAAAVLKGSQDNQLNLNQIVNYNTRSLEFHSPITTKYKDNGMSLGDMAAAA 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMN---NTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           +  S N     I E      +   + M    +    L         A    +    T A 
Sbjct: 128 LQYSDNGATNIILERYIGGPEGMTKFMRSIGDKDFRLDRWELDLNTAIPGDERDTSTPAA 187

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCASGF 226
               L      +          +              A        G KTG      +  
Sbjct: 188 VAKSLKTLALGNILNEREKETYQTWLKGNTTGAARIRASVPSDWVVGDKTGSCGAYGTAN 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNT 251
           +      +    LI  +    +   
Sbjct: 248 DYAVVWPKNRAPLIISVYTTKNEKE 272


>gi|218903638|ref|YP_002451472.1| beta-lactamase Bla1 [Bacillus cereus AH820]
 gi|218535660|gb|ACK88058.1| beta-lactamase Bla1 [Bacillus cereus AH820]
          Length = 306

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 69  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 126 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 186 LNEAIPGDIRDTSTAXAIARNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 246 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 290


>gi|119434092|gb|ABL75154.1| OKP [Klebsiella pneumoniae]
          Length = 275

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 69/267 (25%), Gaps = 13/267 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +IA   L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 2   LISLIAALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLAAWRASERFPLMST 61

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 62  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 121

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     + +          F++ + +    L    T    A         T A     L 
Sbjct: 122 NSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 181

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T          +    +  +       AV         KTG        IVA    
Sbjct: 182 KLLTTPSLSARSQQLLLQWMVDDRVAGPLIRAVLPAGWFIADKTGAGERGSRGIVALLGP 241

Query: 235 GDQ--SLIAVILG--ALDRNTRNKVSA 257
             +   ++ + L   A     RN+  A
Sbjct: 242 DGKAERIVVIYLRDTAATMAERNQQIA 268


>gi|216843|dbj|BAA02497.1| beta-lactamase precursor [Proteus mirabilis]
 gi|2821951|dbj|BAA24531.1| carbenicillinase [Proteus mirabilis]
          Length = 288

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 80/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL++ ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLVFSLLIPSVVFASSSKFRQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGSKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNKKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|6225088|sp|Q51355|BLC4_PSEAE RecName: Full=Beta-lactamase CARB-4; AltName: Full=Carbenicillinase
           4; Flags: Precursor
 gi|840931|gb|AAC09012.1| CARB-4 precursor [Pseudomonas aeruginosa]
 gi|62719425|gb|AAX93311.1| carbenicillinase [Pseudomonas aeruginosa]
 gi|62719430|gb|AAX93315.1| carbenicillinase [Pseudomonas aeruginosa]
 gi|225393065|gb|ACN89662.1| beta-lactamase CARB-4 [Acinetobacter baumannii]
          Length = 288

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFP-----------FLSIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           + L++ ++ + S +F               I  +        +LDT TG    +   +  
Sbjct: 2   KLLLVFSLLIPSMVFANSSKFQQVEQDAKVIEASLSAHIGISVLDTQTGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ +    + I I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGEINPKSTIEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  +    ++   F++ + +    L                   T   
Sbjct: 121 TMTTSDNAAANIILNALGGPESVTDFLRQIGDKETRLDRIEPELNEGKLGDLRDTTTPNA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            +  L+  +           +++   +  +   N   +V         ++G       +I
Sbjct: 181 IVNTLNELLFGSTLSQDGQKKLEYWMVNNQVTGNLLRSVLPEGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      QS I V
Sbjct: 241 TAVVWSEAQSPIIV 254


>gi|82400282|gb|ABB72859.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Tallahassee]
          Length = 288

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + LS  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLSKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|281335990|gb|ADA62552.1| CTX-M-61-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|21685580|gb|AAM74565.1|AF409092_1 carbenicillin-hydrolyzing beta-lactamase [Vibrio cholerae
           non-O1/non-O139]
          Length = 288

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 16/256 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-----------AETNKLP-YYTLLDTNTGHVIAENYPD 48
           M+  L + A+ M S +F   S              +        +LDT  G    +   D
Sbjct: 1   MKSLL-VFALLMPSVVFASSSKFQSVEQEIKGIESSLSARIGVAILDTQNGES-WDYNGD 58

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K +    +    +  K  L + + I K            + G  +TL +A 
Sbjct: 59  QRFPLTSTFKTIACAKLLYDAEHGKVNLNSTVEIKKADLVTYSPVLEKQVGKPITLSDAC 118

Query: 109 KLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +  +    K+   F++ + +    L                   T 
Sbjct: 119 LATMTTSDNTAANIVINAVGDPKSITDFLRQIGDKETRLDRVEPELNEGKLGDLRDTTTP 178

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
               + L+  +           +++   +  +   N   +V     +   ++G       
Sbjct: 179 NAITSTLNQLLFGSTLSEASQKKLESWMVNNQVTGNLLRSVLPVKWSIADRSGAGGFGAR 238

Query: 227 NIVASAIQGDQSLIAV 242
           +I A     ++  I V
Sbjct: 239 SITAIVWSEEKKPIIV 254


>gi|281335936|gb|ADA62525.1| CTX-M-52-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281335912|gb|ADA62513.1| CTX-M-57-like beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 71/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGGVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|134133929|gb|ABO61022.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 298

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 59/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  +  +  D  +   S  K M A    S  +   A+L   + +          
Sbjct: 57  LLDTASGRRL-GHRQDERFPMCSTFKSMLAATALSQAERAPALLDRRVPVRDADLLSHAP 115

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  ++ S N  A  +            F++   +T         
Sbjct: 116 VTRRHAGKDMTVRDLCRATVITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 175

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  D  Q     Q+    I  +       A    
Sbjct: 176 EMNSFAEGDPRDTTTPAAMAATLQRVVLGDVLQPASRQQLSDWLIDNETGDACLRAGLGK 235

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 236 RWRVGDKTGSNGEDARNDIAVLW 258


>gi|229122048|ref|ZP_04251264.1| Beta-lactamase [Bacillus cereus 95/8201]
 gi|228661391|gb|EEL17015.1| Beta-lactamase [Bacillus cereus 95/8201]
          Length = 301

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 64  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 120

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 121 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 180

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 181 LNEAIPGDIRDTSTAKAIARNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 241 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 285


>gi|281336016|gb|ADA62565.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKVISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|312194204|ref|YP_004014265.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. EuI1c]
 gi|311225540|gb|ADP78395.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. EuI1c]
          Length = 494

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 18/62 (29%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           A LS              P   ++D  TG V+ +     P  PAS  K   A        
Sbjct: 59  AALSGRLAGPFANPLLGSPAGLVVDGLTGKVLFDQRASVPTAPASTLKTAVAAAALRTFS 118

Query: 71  EK 72
             
Sbjct: 119 AG 120


>gi|281335986|gb|ADA62550.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|225175816|ref|ZP_03729809.1| Beta-lactamase class A-like protein [Dethiobacter alkaliphilus AHT
           1]
 gi|225168740|gb|EEG77541.1| Beta-lactamase class A-like protein [Dethiobacter alkaliphilus AHT
           1]
          Length = 356

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            D  TG  +  +  D    PAS+ K +   V    +K ++  L    
Sbjct: 112 YDFATGETL-SHNGDRVIFPASMIKTLYLAVFLEEVKHERQSLDAEY 157


>gi|281336014|gb|ADA62564.1| CTX-M-58-like beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|164514477|emb|CAP45560.1| class A beta-lactamase CTX-M-16 [Escherichia coli]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 71/283 (25%), Gaps = 24/283 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+  A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVTAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNDTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
               L               Q+            +  A        G KTG       N 
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTGSGGYGTTND 248

Query: 229 VASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           +A      +  L+ V         A  R      +A +++ G 
Sbjct: 249 IAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAEGL 291


>gi|319426358|gb|ADV54432.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Shewanella putrefaciens 200]
          Length = 504

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 14/91 (15%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNK-------------LPYYTL-LDTNTGHVIAENYPDH 49
            L   +++  +      SI                       L LD     +I     D 
Sbjct: 14  ILSFFSISTKATQANIPSIEPRTTTLSQNIADINPRHSQTALLALDLANNQIIYSQQADT 73

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
              PAS  K++TA    + L  +   +T   
Sbjct: 74  LLVPASTQKILTAVTAMAELGTEFRYVTELW 104


>gi|94971521|ref|YP_593569.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Koribacter
          versatilis Ellin345]
 gi|94553571|gb|ABF43495.1| D-Ala-D-Ala carboxypeptidase [Candidatus Koribacter versatilis
          Ellin345]
          Length = 518

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 13/77 (16%)

Query: 3  QFLVIIAMAMLSNIFPFLS-----------IAETNKLPYYTL--LDTNTGHVIAENYPDH 49
          + +  +   +L  ++   +            A      ++ +  +  + G  +     D 
Sbjct: 5  RTIPALFFLVLIALYAPAADKLSSKIDRVLSAPDVSRAFWGIEIVSLDNGKTLYSRNSDK 64

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS TKL T    F
Sbjct: 65 LFTPASNTKLFTTSTAF 81


>gi|281336006|gb|ADA62560.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|229544070|ref|ZP_04433129.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacillus coagulans 36D1]
 gi|229325209|gb|EEN90885.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacillus coagulans 36D1]
          Length = 495

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 23/89 (25%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDT---------------NT 38
          ++++VI  MA L         A        +        +L+                ++
Sbjct: 3  KRWVVIWTMAFLFIQGTGPYAAGDREGCGKKETDAKIAGILEAAPLKGGIVAISVRSADS 62

Query: 39 GHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          G ++ E   +    PAS  KL+TA     
Sbjct: 63 GKLLYEQNGNTLLRPASNMKLLTAAAALE 91


>gi|145296695|ref|YP_001139516.1| hypothetical protein cgR_2600 [Corynebacterium glutamicum R]
 gi|140846615|dbj|BAF55614.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 427

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           D  +G V+ E        PAS TK++TA V    
Sbjct: 88  DVESGEVVWEQNQGTAVRPASATKILTAAVALYE 121


>gi|21325471|dbj|BAC00093.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Corynebacterium glutamicum ATCC 13032]
          Length = 411

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           D  +G V+ E        PAS TK++TA V    
Sbjct: 72  DVESGEVVWEQNQGTAVRPASATKILTAAVALYE 105


>gi|19553893|ref|NP_601895.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium glutamicum
           ATCC 13032]
 gi|62391536|ref|YP_226938.1| penicillin-binding protein, D-Ala-D-Ala carboxypeptidase
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326878|emb|CAF20722.1| PENICILLIN-BINDING PROTEIN, D-ALA-D-ALA CARBOXYPEPTIDASE
           [Corynebacterium glutamicum ATCC 13032]
          Length = 427

 Score = 45.4 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           D  +G V+ E        PAS TK++TA V    
Sbjct: 88  DVESGEVVWEQNQGTAVRPASATKILTAAVALYE 121


>gi|281335934|gb|ADA62524.1| CTX-M-52-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|229170639|ref|ZP_04298283.1| Beta-lactamase [Bacillus cereus AH621]
 gi|228612799|gb|EEK69980.1| Beta-lactamase [Bacillus cereus AH621]
          Length = 348

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 62/230 (26%), Gaps = 7/230 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      +   L   IT +K+        
Sbjct: 111 IDTGTNRTIAYR-PNERFAFASTYKALAAGVLLQQNSTE--KLNEVITYTKDDLVEYSPI 167

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +           
Sbjct: 168 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMADRFEPE 227

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 228 LNEATPGDIRDTSTAKAIATNLKAFTVGNALPADKRKILTEWMKGNATGDKLIRAGVPTD 287

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSASLL 260
              G K+G       N +A     ++  +I  IL + D          L+
Sbjct: 288 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKDATYD-NKLI 336


>gi|78057322|gb|ABB17185.1| CTX-M-52 beta-lactamase [Klebsiella pneumoniae]
 gi|281335922|gb|ADA62518.1| CTX-M-52 beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|330447388|ref|ZP_08311037.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Photobacterium leiognathi subsp. mandapamensis
          svers.1.1.]
 gi|328491579|dbj|GAA05534.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Photobacterium leiognathi subsp. mandapamensis
          svers.1.1.]
          Length = 467

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKL------PYYTLLDTNTGHVIAENYPDHPWNPAS 55
          ++ L    MA   + F   S  +              +++  T  VI +   D    PAS
Sbjct: 3  KKLLCSALMATSFSSFAAFSPQQAINQLPKGSDVTLLIVNPATNKVIYDKRADELQAPAS 62

Query: 56 LTKLMTAYVV 65
            K +TA   
Sbjct: 63 TQKTITALAA 72


>gi|94502850|gb|ABF29655.1| beta-lactamase [Enterobacter cloacae]
          Length = 256

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 6/215 (2%)

Query: 33  LLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+DT +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 36  LIDTKDNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 93

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 94  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTE 153

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 154 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 213

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A      +  L+ V 
Sbjct: 214 TSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVT 248


>gi|94502859|gb|ABF29660.1| beta-lactamase [Enterobacter cloacae]
          Length = 251

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 6/215 (2%)

Query: 33  LLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+DT +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 30  LIDTKDNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 87

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 88  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTE 147

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 148 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 207

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A      +  L+ V 
Sbjct: 208 TSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVT 242


>gi|94502839|gb|ABF29649.1| beta-lactamase [Enterobacter cloacae]
          Length = 256

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 6/215 (2%)

Query: 33  LLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+DT +   V+     D  +   S +K+M A  V    + +K +L  P+ I         
Sbjct: 35  LIDTKDNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 92

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 93  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFAREIGDETFRLDRTE 152

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 153 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 212

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
                G KTG       N +A      +  L+ V 
Sbjct: 213 TSWTVGDKTGSGDYGTTNDIAVIWPQGRAPLVLVT 247


>gi|320333000|ref|YP_004169711.1| beta-lactamase [Deinococcus maricopensis DSM 21211]
 gi|319754289|gb|ADV66046.1| beta-lactamase [Deinococcus maricopensis DSM 21211]
          Length = 335

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 3/48 (6%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           Y + D  TG           +   S+TK MTA +        +  L 
Sbjct: 35 SYGVADLETGR---AMDAATTFPIGSITKTMTATLALQLRDAGQLDLD 79


>gi|281336008|gb|ADA62561.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|228949530|ref|ZP_04111780.1| Beta-lactamase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228810135|gb|EEM56506.1| Beta-lactamase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 301

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 64  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 120

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 121 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 180

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 181 LNEAIPGDIRDTSTAKAIARNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 241 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 285


>gi|197724711|emb|CAP12357.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 68/261 (26%), Gaps = 22/261 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWNP 53
           R  L+ +  A+   +F      E  K+          Y  +D  +G  +A       +  
Sbjct: 5   RLCLISLIAALPLAVFASPQPLEQIKISEGQLAGRVGYVEMDLASGRTLAAWRASERFPL 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++    V + +      L   I   +         S       MT+       I 
Sbjct: 65  MSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAIT 124

Query: 114 KSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            S N     + +          F++ + +    L    T    A         T A    
Sbjct: 125 MSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAT 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L   + T         Q+    +  +       AV         KTG            
Sbjct: 185 TLRKLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------ 232

Query: 232 AIQGDQSLIAVILGALDRNTR 252
           A +     I  +LG   +  R
Sbjct: 233 AGERGSRGIVALLGPDGKAER 253


>gi|325929380|ref|ZP_08190510.1| beta-lactamase class A [Xanthomonas perforans 91-118]
 gi|325540292|gb|EGD11904.1| beta-lactamase class A [Xanthomonas perforans 91-118]
          Length = 266

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   D  +   S  K + A  V   + + K  L   + I  +       
Sbjct: 24  LLDSATGKRLGQR-EDERFPMCSTFKFVLAAAVLRRVDQGKLTLAQQVRIHASDMLEHAP 82

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 83  VTERHVGGSLSVGELCRATMIYSDNPAANLLFPLVGEPAGVTAFLRGIGDAQTRTDRYEP 142

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D        Q+    I  +   +   A  T 
Sbjct: 143 QMNRFADDDPRDTTTPAAMAATLRTLLLGDALHPASRKQLTDWMIDNRTGDDCLRAGLTA 202

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 203 GWKIGDKTGSNGTDTRNDIAILW 225


>gi|284040035|ref|YP_003389965.1| beta-lactamase [Spirosoma linguale DSM 74]
 gi|283819328|gb|ADB41166.1| beta-lactamase [Spirosoma linguale DSM 74]
          Length = 323

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 78/272 (28%), Gaps = 30/272 (11%)

Query: 2   RQFLVIIAMAMLSNI-FPFLSIAETNKLP----------------YYTLLDTNTGHVIAE 44
           R   + I +A +S +  P  + +                           D  TG  +  
Sbjct: 26  RIIFLTIGLAFVSALWLPVAAQSRPTLAKLRQQIEQELSRHPGTFAVAFKDLKTGKELLI 85

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                 ++ AS  K      V+    + K  L+  +TI+ +       +S        + 
Sbjct: 86  R-EHEVFHAASTMKTPVMIEVYKQAAQHKLALSDSMTITTDFKSIVDGSSYSLHAEQDSD 144

Query: 105 DNALK------------LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +  K              ++  ++++A  +       +       +  +K++ +     
Sbjct: 145 TSIYKAVGTKRTLAALVYDMIIVSSNLATNMVIERVGAQNVTQTMRDLGAKDIQVRRGVE 204

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            +        + TTA D+ ++  +I           +     +  +K+ +          
Sbjct: 205 DSKAFAQGLNNTTTAYDLMVIFEKIARGKAVSPDASKAMITTLLDQKFNDAIPGKLPKDV 264

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
               KTG       +     +   +  + V+L
Sbjct: 265 KVAHKTGSITGVRHDSGIVFLPDGRKYVLVLL 296


>gi|281335908|gb|ADA62511.1| CTX-M-52-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|281335842|gb|ADA62489.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|124244225|gb|ABM92284.1| betalactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 299

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 13  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 71

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 72  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 131

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 132 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 191

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 192 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 251

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 252 TAVVWSEHQAPIIV 265


>gi|281335984|gb|ADA62549.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|219920919|emb|CAQ76637.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 45.4 bits (105), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     D   LI V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLILVT 263


>gi|281335958|gb|ADA62536.1| CTX-M-52-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|113953603|ref|YP_730177.1| carboxylesterase, beta-lactamase family protein [Synechococcus sp.
           CC9311]
 gi|113880954|gb|ABI45912.1| carboxylesterase, beta-lactamase family protein [Synechococcus sp.
           CC9311]
          Length = 373

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 10/167 (5%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A+        +     ++  + L   + G   A+  PD     AS  K     V    
Sbjct: 93  LTALSKRWQALAAKDPDLQVSAFMLA-LDDGR-YAQLNPDTALPAASAIKTPILLVAIEE 150

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
           +   +     P+T+SK            K   T      +   +++ +++ A  +     
Sbjct: 151 IDAGRLSWNEPLTLSKTVVGGGAGWMASKPLGTRFPTYEVATEMIRVSDNTATNLL---- 206

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--HYTTARDMAIL 173
                    +N    +LGLSAT   N   +      + T+ARD+A  
Sbjct: 207 IERVGGQADLNARFNSLGLSATKVNN--WLPDLKGTNTTSARDLARA 251


>gi|281335978|gb|ADA62546.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|229091492|ref|ZP_04222702.1| Beta-lactamase [Bacillus cereus Rock3-42]
 gi|228691866|gb|EEL45613.1| Beta-lactamase [Bacillus cereus Rock3-42]
          Length = 312

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 75  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHQIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPRDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 296


>gi|197724676|emb|CAP12359.2| beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 68/261 (26%), Gaps = 22/261 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWNP 53
           R  L+ +  A+   +F      E  K+          Y  +D  +G ++A       +  
Sbjct: 5   RLCLISLIAALPLAVFASPQPLEQIKISEGQLAGRVGYVEMDLASGRMLAAWRASERFPL 64

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++    V + +      L   I   +         S       MT+       I 
Sbjct: 65  MSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAIT 124

Query: 114 KSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMA 171
            S N     +            F++ + +    L    T    A         T A    
Sbjct: 125 MSDNTAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMAT 184

Query: 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVAS 231
            L   + T         Q+    +  +       AV         KTG            
Sbjct: 185 TLRKLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------ 232

Query: 232 AIQGDQSLIAVILGALDRNTR 252
           A +     I  +LG   +  R
Sbjct: 233 AGERGSRGIVALLGPDGKAER 253


>gi|326778513|ref|ZP_08237778.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces cf. griseus XylebKG-1]
 gi|326658846|gb|EGE43692.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces cf. griseus XylebKG-1]
          Length = 483

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           A A+   + P ++  E       +++DT TG  +          PAS  K+ T     
Sbjct: 102 AAALRDTLAPLIAAPELGDKVAASVIDTATGKQLYGTGATTAMTPASTIKIATTTAAL 159


>gi|182437877|ref|YP_001825596.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178466393|dbj|BAG20913.1| putative D-alanyl-D-alanine carboxypeptidase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 483

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           A A+   + P ++  E       +++DT TG  +          PAS  K+ T     
Sbjct: 102 AAALRDTLAPLIAAPELGDKVAASVIDTATGKQLYGTGATTAMTPASTIKIATTTAAL 159


>gi|302559299|ref|ZP_07311641.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302476917|gb|EFL40010.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 440

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTKLMTAYVVFSFL 69
           L+ +   L            ++D  TG  +    P       PAS TK+ TA    S +
Sbjct: 54  LATVLDPLLKNPALGDRSAAVVDVATGTRLYGTGPGTGKALTPASTTKIATAVAALSAM 112


>gi|255065510|ref|ZP_05317365.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria sicca ATCC 29256]
 gi|255050335|gb|EET45799.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria sicca ATCC 29256]
          Length = 479

 Score = 45.4 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLT 57
          M+       + +     P  +I             + + ++G+V+ ++  + P NPAS  
Sbjct: 10 MKLRQTAALLWLSILSLPAFAIDFGRIPQDEISVYVQELDSGNVLVDHRSNVPVNPASTM 69

Query: 58 KLMTAYVVFSF 68
          KL+TA+  F  
Sbjct: 70 KLVTAFAAFKA 80


>gi|281335988|gb|ADA62551.1| CTX-M-1 group beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|6468749|emb|CAB61643.1| beta-lactamase FONA-5 [Serratia fonticola]
          Length = 295

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 72/275 (26%), Gaps = 24/275 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP----------------YYTLLD-TNTGHVIAENY 46
            +V   M +L    P  +     K                     L+D  +   ++    
Sbjct: 11  LMVATVMPLLFGSAPLWAQPANAKANIQQQLSELEKNSGGRLGVALIDTADNSQILY--R 68

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            D  +   S +K+M    +    +  K +L   + I ++        +     + MTL  
Sbjct: 69  GDERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYNPIAEKHLDTGMTLAE 128

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
                I  S N     I E L    K          K   L  T       +      TT
Sbjct: 129 FSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTEPTLNTAIPGDKRDTT 188

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFTCAS 224
           +     +S +  T         + + +E                      G KTG     
Sbjct: 189 SPQAMAISLQNLTLGKALAEPQRAQLVEWMKGNTTGGASIRAGLPTTWVVGDKTGSGDYG 248

Query: 225 GFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
             N +A     +   L+ V      +  +N  +  
Sbjct: 249 TTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|197335045|ref|YP_002155230.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio fischeri MJ11]
 gi|197316535|gb|ACH65982.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio fischeri MJ11]
          Length = 468

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLLD-TNTGHVIAENYPDHPWNPASLTKLMTAY 63
          L +I+ + +++I   LS   +        ++   +  +  +   D    PAS  K++TA 
Sbjct: 11 LSLISFSSIADIKETLSSLPS-GSRAAITVENLQSNKIEFQQKQDELLPPASTLKIVTAL 69

Query: 64 VV 65
          V 
Sbjct: 70 VA 71


>gi|281335976|gb|ADA62545.1| CTX-M-79-derivative beta-lactamase [synthetic construct]
          Length = 291

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 20/261 (7%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
                 +  S N     +   +    +   F + + + +  L  + +    A        
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTESTLNTAIPGDPRDT 183

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +       L               Q+            +  A        G KTG    
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGGY 243

Query: 224 SGFNIVASAIQGDQ-SLIAVI 243
              N +A     D+  LI V 
Sbjct: 244 GTTNDIAVIWPKDRAPLILVT 264


>gi|289770878|ref|ZP_06530256.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
 gi|289701077|gb|EFD68506.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces lividans TK24]
          Length = 459

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
               ++D  TG  +     D P  PAS TK+
Sbjct: 95  RAAAVVDLTTGKRLYGLGSDAPLTPASTTKI 125


>gi|256786985|ref|ZP_05525416.1| hypothetical protein SlivT_21059 [Streptomyces lividans TK24]
          Length = 507

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
               ++D  TG  +     D P  PAS TK+
Sbjct: 143 RAAAVVDLTTGKRLYGLGSDAPLTPASTTKI 173


>gi|21221835|ref|NP_627614.1| hypothetical protein SCO3408 [Streptomyces coelicolor A3(2)]
 gi|4808347|emb|CAB42761.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 459

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
               ++D  TG  +     D P  PAS TK+
Sbjct: 95  RAAAVVDLTTGKRLYGLGSDAPLTPASTTKI 125


>gi|297251585|gb|ADI25069.1| oxacillinase OXA-114e [Achromobacter xylosoxidans]
          Length = 275

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/243 (8%), Positives = 53/243 (21%), Gaps = 11/243 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + PAS  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQGTQQACAERYTPASTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAMA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    K+ G      +++  +         R    L  R 
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGKHNGTDGAWIISSLRISPLEQLAFLR---KLVNRQ 178

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                      +      +   +           G++G+ T          V  A +  +
Sbjct: 179 LPVKAAAYELAENLFEVGQADGWRLYGKTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLI 240
            L+
Sbjct: 237 QLV 239


>gi|6468746|emb|CAB61641.1| beta-lactamase FONA-4 [Serratia fonticola]
          Length = 295

 Score = 45.0 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 76/280 (27%), Gaps = 26/280 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------------LLD-TNTGHV 41
           +R+  +++A  M          A+T                         L+D  +   +
Sbjct: 6   LRKTTLMVATVMPLLFGSAPLWAQTANAKANIQQQLSELEKSSGGRLGVALIDTADNSQI 65

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    +    +  K +L   + I ++        +     + 
Sbjct: 66  LY--RGDERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYNPIAEKHLDTG 123

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       I  S N     I E L    K  +F + + + +  L  +      A    
Sbjct: 124 MTLAEFSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTEPTLNTAIPGD 183

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +       L               Q+            +  A        G KTG
Sbjct: 184 ERDTSSPLAMAKSLQNLTLGKALGEPQRAQLVEWMKGNTTGGASIRAGLPTTWIVGDKTG 243

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                  N +A     +   L+ V      +  +N  +  
Sbjct: 244 SGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|219920983|emb|CAQ76669.1| beta-lactamase [Klebsiella oxytoca]
          Length = 269

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 70/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDLEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      D        Q+            +  A          KTG       
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVXDKTGAGDYGTT 244

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     D   L+ V 
Sbjct: 245 NXIAVIWPEDHAPLVLVT 262


>gi|40950501|gb|AAR97884.1| AmpC [Aliivibrio fischeri]
          Length = 283

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 67/252 (26%), Gaps = 11/252 (4%)

Query: 1   MRQFLVIIAMAMLSN-----IFPFLSIAETNKLPYYT---LLDTNTGHVIAENYPDHPWN 52
           M+    +  + +L+N            A       Y    +L+T T     E   D  + 
Sbjct: 1   MKIKPFLFGLIVLANNAIAGSLTQNIEAIELSSGGYIGVSVLNTETNKT-WEYKGDQRFP 59

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
             S  K +    +               +I+K         +       +T   A +  +
Sbjct: 60  MMSTFKTLACAKMLYDSSVGGIDKYKTTSITKEQIIPWSPVTEPLVDHMITTKKACEATM 119

Query: 113 VKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           + S N  A  +   +       +F++ + +    L         A    +    T     
Sbjct: 120 LMSDNTAANIVLNEIGGPSSLTQFLRAIGDDKTRLDRIEPELNEAKNGDKRDTTTPVAMS 179

Query: 171 AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA 230
             L+  +  +         +K   +  K       ++     +   ++G        I A
Sbjct: 180 QTLNALLFGNTLNPQDEQTLKSWMMNNKVSDPLLRSILPNNWSIADRSGAGGFGSRGITA 239

Query: 231 SAIQGDQSLIAV 242
           +        I +
Sbjct: 240 AVWNDKHQPIII 251


>gi|55845897|gb|AAV66985.1| Imi3 [Enterobacter cloacae]
 gi|74229922|gb|ABA00479.1| clavulanic-acid inhibited carbapenemase IMI-2 [Enterobacter
           asburiae]
          Length = 292

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 67/265 (25%), Gaps = 17/265 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENYPDHPW 51
           +  ++ +  ++S  F   +  +                    LDT +G        +  +
Sbjct: 9   RIAILFSSCLVSISFFSQANTKGIDEIKNLETDFNGRIGVYALDTGSGKS-FSYKANERF 67

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              S  K   A  V    ++ +  L   +  +  + E+    +T  K + M+L +     
Sbjct: 68  PLCSSFKGFLAAAVLKGSQDNQLNLNQIVNYNTRSLEFYSPITTKYKDNGMSLGDMAAAA 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMN---NTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           +  S N     I E      +   + M    +    L         A    +    T A 
Sbjct: 128 LQYSDNGATNIILERYIGGPEGMTKFMRSIGDKDFRLDRWELDLNTAIPGDERDTSTPAA 187

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCASGF 226
               L      +          +              A        G KTG      +  
Sbjct: 188 VAKSLKTLALGNILNEREKETYQTWLKGNTTGAARIRASVPSDWVVGDKTGSCGAYGTAN 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNT 251
           +      +    LI  +    +   
Sbjct: 248 DYAVVWPKNRAPLIISVYTTKNEKE 272


>gi|313509545|gb|ADR66026.1| beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 262

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 70/258 (27%), Gaps = 27/258 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
             +   +  S N     +   +               +   L  T       +       
Sbjct: 124 ELIAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ 237
                  N +A     D+
Sbjct: 240 SGGYGTTNDIAVIWPKDR 257


>gi|154486834|ref|ZP_02028241.1| hypothetical protein BIFADO_00666 [Bifidobacterium adolescentis
           L2-32]
 gi|154084697|gb|EDN83742.1| hypothetical protein BIFADO_00666 [Bifidobacterium adolescentis
           L2-32]
          Length = 503

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 24/55 (43%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            F + A      +   +   +G+V+AEN  D P  PAS  K +TAY     L   
Sbjct: 110 AFRASAAGFGGEFSIAIADASGNVVAENNIDVPRTPASTMKTLTAYAAAVELDMG 164


>gi|119025425|ref|YP_909270.1| hypothetical protein BAD_0407 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765009|dbj|BAF39188.1| hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3
           (S13) domain [Bifidobacterium adolescentis ATCC 15703]
          Length = 503

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 24/55 (43%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
            F + A      +   +   +G+V+AEN  D P  PAS  K +TAY     L   
Sbjct: 110 AFRASAAGFGGEFSIAIADASGNVVAENNIDVPRTPASTMKTLTAYAAAVELDMG 164


>gi|6468752|emb|CAB61645.1| beta-lactamase FONA-6 [Serratia fonticola]
          Length = 295

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 76/280 (27%), Gaps = 26/280 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------------LLD-TNTGHV 41
           +RQ  +++A  M          A+T                         L+D  +   +
Sbjct: 6   LRQTTLMVATVMPLLFGSAPLWAQTANAKANIQQQLSELEKSSGGRLGVALIDTADNSQI 65

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    +    +  K +L   + I ++        +     + 
Sbjct: 66  LY--RADERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYNPIAEKHLDTG 123

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       I  S N     I E L    K  +F + + + +  L  +      A    
Sbjct: 124 MTLAEFSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTEPTLNTAIPGD 183

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +       L               Q+            +  A        G KTG
Sbjct: 184 KRDTTSPLAMAKSLQNLTLGKALGEPQRAQLVEWMKGNTTGGASIRAGLPTTWVVGDKTG 243

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                  N +A     +   L+ V      +  +N  +  
Sbjct: 244 SGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|584847|sp|P37322|BLC3_PSEAE RecName: Full=Beta-lactamase CARB-3; AltName: Full=Carbenicillinase
           3; Flags: Precursor
          Length = 288

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKLLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|455609|gb|AAB19684.1| beta-lactamase [Klebsiella oxytoca, strain D488, Peptide Partial,
           263 aa]
 gi|228284|prf||1802283A beta lactamase
          Length = 263

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 28  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 85

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 86  KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 145

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +          
Sbjct: 146 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRVGLPESWV 205

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +R      +A +++ G 
Sbjct: 206 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 263


>gi|6468737|emb|CAB61635.1| class A beta-lactamase FONA-1 [Serratia fonticola]
          Length = 295

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 76/280 (27%), Gaps = 26/280 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------------LLD-TNTGHV 41
           +R+  +++A  M          A+T                         L+D  +   +
Sbjct: 6   LRKTTLMVATVMPLLFGSAPLWAQTANAKANIQQQLSELEKSSGGRLGVALIDTADNSQI 65

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    +    +  K +L   + I ++        +     + 
Sbjct: 66  LY--RGDERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYNPIAEKHLDTG 123

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       I  S N     I E L    K  +F + + + +  L  +      A    
Sbjct: 124 MTLAEFSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTEPTLNTAIPGD 183

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +       L               Q+            +  A        G KTG
Sbjct: 184 ERDTSSPLAMAKSLQNLTLGKALGEPQRAQLVEWMKGNTTGGASIRAGLPTTWIVGDKTG 243

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                  N +A     +   L+ V      +  +N  +  
Sbjct: 244 SGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|151528|gb|AAA25979.1| carbenicillinase [Pseudomonas aeruginosa]
          Length = 304

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 18  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 76

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 77  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 136

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 137 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 197 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 256

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 257 TAVVWSEHQAPIIV 270


>gi|224760695|gb|ACN62388.1| beta-lactamase OXY-2-9 [Klebsiella oxytoca]
          Length = 290

 Score = 45.0 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDETFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|208612657|gb|ACI29757.1| beta-lactamase PSE-1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 310

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 23  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 81

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 82  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 141

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 142 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 201

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 202 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 261

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 262 TAVVWSEHQAPIIV 275


>gi|160369828|gb|ABX38721.1| oxacillinase OXA-114a [Achromobacter xylosoxidans]
          Length = 275

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/255 (10%), Positives = 60/255 (23%), Gaps = 11/255 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + PAS  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQGTQQACAERYTPASTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAKA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    K+ G      +++  +         R +      +
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGKHNGTDGAWIISSLRISPLEQLAFLRKLVNRQLPV 181

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           K    +        G     + Y           G++G+ T          V  A +  +
Sbjct: 182 KAAAYELAENLFEAGQADGWRLYG---KTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLIAVILGALDRNTR 252
            L+   L   +R TR
Sbjct: 237 QLVYARLLQDERATR 251


>gi|482594|pir||A49789 beta-lactamase (EC 3.5.2.6) PSE-1 - Pseudomonas aeruginosa plasmid
           RPL11 transposon Tn1403
 gi|9719057|gb|AAF97621.1|AF221899_2 beta lactamase [Vibrio cholerae]
 gi|151075|gb|AAA25740.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|38488680|dbj|BAD02330.1| B-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|47717641|gb|AAT37847.1| beta-lactamase [Vibrio cholerae]
 gi|47717661|gb|AAT37859.1| beta-lactamase [Vibrio cholerae]
 gi|74422686|gb|ABA06533.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|82400290|gb|ABB72864.1| beta-lactamase [Salmonella enterica subsp. enterica serovar Albany]
 gi|133902727|gb|ABO42030.1| PSE-1/CARB-2 beta-lactamase [Acinetobacter genomosp. 13TU]
 gi|157674383|gb|ABV60286.1| beta-lactamase PSE-1 [Proteus mirabilis]
 gi|169138736|gb|ACA48667.1| beta-lactamase PSE-1 [Morganella morganii]
 gi|295002675|gb|ADF59108.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|295311787|gb|ADF97244.1| PSE-1/CARB-2 beta-lactamase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|300391745|gb|ADK11242.1| beta-lactamase [Pseudomonas aeruginosa]
 gi|312183500|gb|ADQ42319.1| PSE-1/CARB-2 beta-lactamase [Salmonella enterica subsp. enterica
           serovar Paratyphi B]
          Length = 304

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 18  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 76

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 77  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 136

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 137 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 197 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 256

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 257 TAVVWSEHQAPIIV 270


>gi|227511610|ref|ZP_03941659.1| possible beta-lactamase class A [Lactobacillus buchneri ATCC 11577]
 gi|227085104|gb|EEI20416.1| possible beta-lactamase class A [Lactobacillus buchneri ATCC 11577]
          Length = 326

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 71/252 (28%), Gaps = 24/252 (9%)

Query: 26  NKLPYYTLLDTNTGHV------IAENYP----DHPWNPASLTKLMTAYVVFSFLKEKKAM 75
                  +   ++G        +         +     AS+ K+      F  +K  +  
Sbjct: 72  LTAESQCVA-ASSGKTSIYVSELDSKNSVVENNRVQRSASVIKIFIMIEAFRQIKAGQLT 130

Query: 76  LTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
           L   + I  +           +    +++   L+L+I  S N     + + L       +
Sbjct: 131 LNQQVIIPADDRVGGTGELANQNTHQLSVKQLLRLMIRNSDNTATNVLIDKL-----GGL 185

Query: 136 QHMNNTSKNLGLSATHFMNAHGVV------QHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
             +N     LG S T       +          + T+  D+      +         Y  
Sbjct: 186 AVINAEINRLGCSHTKL-RRKMLDYRALQNGKDNVTSVSDLGKTLMALSGHRLLGHPYDS 244

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQS-LIAVILGALD 248
                ++     +   A+ +       KTG     G    A+ ++  +   + V+L    
Sbjct: 245 EMLQLLRYNSNQSKLSALISRKAVIYNKTGEFPDYGVQNDAAIVKKGKRAFVVVVLSENG 304

Query: 249 RNTRNKVSASLL 260
              +   +  +L
Sbjct: 305 TQQKQINAMQML 316


>gi|226359711|ref|YP_002777489.1| class A beta-lactamase [Rhodococcus opacus B4]
 gi|226238196|dbj|BAH48544.1| class A beta-lactamase [Rhodococcus opacus B4]
          Length = 317

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 55/214 (25%), Gaps = 4/214 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  TG V   +  D  +   S  K   +  V   +++    L   + I           
Sbjct: 74  VDPQTGAV-YSHRGDERFAMCSTFKAYASAAVLRKIEDGSTSLDKTVMIEPADLVENSPV 132

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATH 151
           +    G+ MTL    +  + +S N     +   +   +      + + + S  L    T 
Sbjct: 133 TAAAVGTPMTLGQIAEAALTQSDNTAGNYLLREIGGPQAITALARDVGDASTRLDRWETE 192

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T           +  D        Q+       K       A     
Sbjct: 193 LNTAFRGDPRDTTTPTGLAHGFRALLLGDALDAASRGQLLDWMRASKTSDKRMRAGLPPG 252

Query: 212 GADGMKTGFTCASGFNIVASAIQ-GDQSLIAVIL 244
                KTG       N    A       ++  +L
Sbjct: 253 WTAADKTGGGGFGTANDAGVAWSPDGSPIVLAVL 286


>gi|328553242|gb|AEB23734.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
          TA208]
 gi|328911973|gb|AEB63569.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
          LL3]
          Length = 491

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 5/49 (10%)

Query: 18 PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
               A    +         TG V+  +  D    PASL KL+TA    
Sbjct: 49 ALKGAAAGVSVRSA-----KTGEVLFASGEDMRLRPASLMKLLTASAAL 92


>gi|219920959|emb|CAQ76657.1| beta-lactamase [Klebsiella oxytoca]
          Length = 270

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWXKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|219920969|emb|CAQ76662.1| beta-lactamase [Klebsiella oxytoca]
          Length = 244

 Score = 45.0 bits (104), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 64/233 (27%), Gaps = 17/233 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLD-TNTGHVIAENYPD 48
           R+  ++ A+ +L       +  +                    L++  +   ++     D
Sbjct: 7   RKIAMLAAVPLLLASGALWASTDAIHQKLTDXEKRSGGRLGVALINTADNSQILY--RGD 64

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    +  K ++   + I+          +     S MTL    
Sbjct: 65  ERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITEKHLQSGMTLAELS 124

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F + + + +  L  +      A    +    T 
Sbjct: 125 AATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLNTAIPGDERDTSTP 184

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                 L      D        Q+            +  A        G KTG
Sbjct: 185 LAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWVVGDKTG 237


>gi|1705480|sp|P52663|BLAN_ENTCL RecName: Full=Imipenem-hydrolyzing beta-lactamase; AltName:
           Full=Carbapenemase; AltName: Full=NMC-A; Flags:
           Precursor
 gi|396088|emb|CAA79967.1| beta-lactamase [Enterobacter cloacae]
 gi|27650896|emb|CAD60091.1| class A nonmetallocarbapenamase [Enterobacter cloacae]
          Length = 292

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 67/265 (25%), Gaps = 17/265 (6%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENYPDHPW 51
           +  ++ +  ++S  F   +  +                    LDT +G        +  +
Sbjct: 9   RIAILFSSCLISISFFSQANTKGIDEIKNLETDFNGRIGVYALDTGSGKS-FSYRANERF 67

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
              S  K   A  V    ++ +  L   +  +  + E+    +T  K + M+L +     
Sbjct: 68  PLCSSFKGFLAAAVLKGSQDNRLNLNQIVNYNTRSLEFHSPITTKYKDNGMSLGDMAAAA 127

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMN---NTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           +  S N     I E      +   + M    +    L         A    +    T A 
Sbjct: 128 LQYSDNGATNIILERYIGGPEGMTKFMRSIGDEDFRLDRWELDLNTAIPGDERDTSTPAA 187

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCASGF 226
               L      +          +              A        G KTG      +  
Sbjct: 188 VAKSLKTLALGNILSEHEKETYQTWLKGNTTGAARIRASVPSDWVVGDKTGSCGAYGTAN 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNT 251
           +      +    LI  +    +   
Sbjct: 248 DYAVVWPKNRAPLIISVYTTKNEKE 272


>gi|218778756|ref|YP_002430074.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Desulfatibacillum
          alkenivorans AK-01]
 gi|218760140|gb|ACL02606.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Desulfatibacillum
          alkenivorans AK-01]
          Length = 417

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%)

Query: 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            SIA         L + + G ++    P+    PAS  K+ T+ +   
Sbjct: 48 PQSIARLLGPKDSLLAENSKGEILYSYNPNALRTPASTFKVFTSLLALK 96


>gi|46277642|gb|AAS87023.1| beta-lactamase PLA-4 [Raoultella planticola]
          Length = 291

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G ++A    D  +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLAGYRSDERFPMMSTFKVLLCGAVLSRVDAGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLTDGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTSFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +V    
Sbjct: 165 LNEARPGDVRDTTTPQAMARTLRNLLTGRVLSSASQQQLQRWMVEDKVAGPLLRSVLPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL-GALDR-NTRNKVSASL 259
                KTG        I+A+     +   ++ + L G     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTGTPAAMDERNKQIAAI 276


>gi|332674665|gb|AEE71481.1| putative carboxypeptidase [Propionibacterium acnes 266]
          Length = 476

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 90  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 146

Query: 68  FLKEKK 73
                 
Sbjct: 147 CTDAGH 152


>gi|315106295|gb|EFT78271.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL030PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|315082138|gb|EFT54114.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL078PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|314985466|gb|EFT29558.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL005PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|314926570|gb|EFS90401.1| conserved domain protein [Propionibacterium acnes HL036PA3]
          Length = 233

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|313817470|gb|EFS55184.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL046PA2]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|313814561|gb|EFS52275.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL025PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|313793178|gb|EFS41245.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL110PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|289428837|ref|ZP_06430517.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes J165]
 gi|289157838|gb|EFD06061.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes J165]
 gi|313802734|gb|EFS43952.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL110PA2]
 gi|313806391|gb|EFS44898.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL087PA2]
 gi|313821994|gb|EFS59708.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL036PA1]
 gi|313824110|gb|EFS61824.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL036PA2]
 gi|313826477|gb|EFS64191.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL063PA1]
 gi|314961365|gb|EFT05466.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL002PA2]
 gi|314964590|gb|EFT08690.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL082PA1]
 gi|314980292|gb|EFT24386.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL072PA2]
 gi|314987376|gb|EFT31467.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL005PA2]
 gi|314989083|gb|EFT33174.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL005PA3]
 gi|315078393|gb|EFT50424.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL053PA2]
 gi|315082717|gb|EFT54693.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL027PA2]
 gi|315086076|gb|EFT58052.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL002PA3]
 gi|315087662|gb|EFT59638.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL072PA1]
 gi|327333315|gb|EGE75035.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL096PA3]
 gi|327445207|gb|EGE91861.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL013PA2]
 gi|327457125|gb|EGF03780.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL092PA1]
 gi|328758407|gb|EGF72023.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL020PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|289424629|ref|ZP_06426412.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes SK187]
 gi|289155326|gb|EFD04008.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes SK187]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|282853312|ref|ZP_06262649.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes J139]
 gi|282582765|gb|EFB88145.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes J139]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|295129826|ref|YP_003580489.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes SK137]
 gi|291376318|gb|ADE00173.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes SK137]
 gi|313772801|gb|EFS38767.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL074PA1]
 gi|313810941|gb|EFS48655.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL083PA1]
 gi|313831706|gb|EFS69420.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL007PA1]
 gi|313834412|gb|EFS72126.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL056PA1]
 gi|313840397|gb|EFS78111.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL086PA1]
 gi|314974754|gb|EFT18849.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL053PA1]
 gi|314977048|gb|EFT21143.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL045PA1]
 gi|315097301|gb|EFT69277.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL038PA1]
 gi|327331329|gb|EGE73068.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL096PA2]
 gi|327447290|gb|EGE93944.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL043PA1]
 gi|327450263|gb|EGE96917.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL043PA2]
 gi|328761142|gb|EGF74686.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL099PA1]
          Length = 457

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|134096832|ref|YP_001102493.1| lipoprotein [Saccharopolyspora erythraea NRRL 2338]
 gi|133909455|emb|CAL99567.1| possible lipoprotein [Saccharopolyspora erythraea NRRL 2338]
          Length = 302

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKLP--------YYTLLDTNTGHVIAENYPDHPWNP 53
          ++ +  +A A  S +          + P         YT++D  +G    ++     +  
Sbjct: 5  KRAVTGLAAATASLVIAATPALSAPQAPQVDPGITLGYTVVDARSGETTLQSNEHEQFRS 64

Query: 54 ASLTKLMTAYVVFSFLKEK 72
          AS+ KL+ A      L+  
Sbjct: 65 ASVVKLLIALDYLEGLEPG 83


>gi|50841747|ref|YP_054974.1| putative carboxypeptidase [Propionibacterium acnes KPA171202]
 gi|50839349|gb|AAT82016.1| putative carboxypeptidase [Propionibacterium acnes KPA171202]
          Length = 476

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 90  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAIALLD 146

Query: 68  FLKEKK 73
                 
Sbjct: 147 CTDAGH 152


>gi|94502867|gb|ABF29664.1| beta-lactamase [Enterobacter cloacae]
          Length = 231

 Score = 45.0 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 54/208 (25%), Gaps = 12/208 (5%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 28  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 85

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 86  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 145

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 146 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G KTG       N +A     D+
Sbjct: 202 ASWVVGDKTGSGDYGTTNDIAVIWPKDR 229


>gi|308173831|ref|YP_003920536.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
          DSM 7]
 gi|307606695|emb|CBI43066.1| D-alanyl-D-alanine carboxypeptidase [Bacillus amyloliquefaciens
          DSM 7]
          Length = 491

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 22/87 (25%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKLPYYT----------------------LLDTNTG 39
          ++   +I + +++ +      A+  +                           +    TG
Sbjct: 6  KRLSAVILLLIIAAVPYIDDSAKAAEQKNALQKELQQILNEEPALKGAAAGVSVQSAKTG 65

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVF 66
           V+  +  D    PASL KL+TA    
Sbjct: 66 EVLFASGEDMRLRPASLMKLLTASAAL 92


>gi|58580993|ref|YP_200009.1| beta lactamase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425587|gb|AAW74624.1| beta lactamase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 313

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 66/228 (28%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   D  +   S  K + A  V   + + K  L   + I  +       
Sbjct: 55  LLDSATGWRLGQR-EDERFPMCSTFKFVLAAAVLQRVDQGKLTLAQRVKIRASDMLEHAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHVGGSLSVGELCRATMIYSDNPAANVLFPLVGDSAGLTGFLRGIGDAQTRSDRYEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D  Q     Q+    I  +   +   A  T 
Sbjct: 174 EMNRFAAGDPRDTTTPAAMAATLRTLLLGDALQPSSRKQLTDWMIDNRTGDDCLRAGLTR 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L     +   + 
Sbjct: 234 EWKIGDKTGSNGTDTRNDIAILWPPKGRAPLLLTTYLNGAKVDDAARD 281


>gi|84622918|ref|YP_450290.1| beta lactamase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84366858|dbj|BAE68016.1| beta lactamase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 313

 Score = 45.0 bits (104), Expect = 0.019,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 67/228 (29%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   D  +   S  K + A  V   + + K  L   + I  +       
Sbjct: 55  LLDSATGWRLGQR-EDERFPMCSTFKFVLAAAVLQRVDQGKLTLAQRVKIRASDMLEHAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A A+            F++ + +          
Sbjct: 114 VTERHVGGSLSVGELCRATMIYSDNPAANALFLLVGDSAGLTGFLRGIGDAQTRSDRYEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D  Q     Q+    I  +   +   A  T 
Sbjct: 174 EMNRFAAGDPRDTTTPAAMAATLRTLLLGDALQPSSRKQLTDWMIDNRTGDDCLRAGLTR 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L     +   + 
Sbjct: 234 EWKIGDKTGSNGTDTRNDIAILWPPKGRAPLLLTTYLNGAKVDDAARD 281


>gi|300790560|ref|YP_003770851.1| D-alanyl-D-alanine carboxypeptidase [Amycolatopsis mediterranei
           U32]
 gi|299800074|gb|ADJ50449.1| D-alanyl-D-alanine carboxypeptidase [Amycolatopsis mediterranei
           U32]
          Length = 812

 Score = 44.6 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++D  TG V+ ++    P  PAS TK++T+    
Sbjct: 441 VIDPVTGTVLWDHGSSTPVTPASTTKVLTSAAAL 474


>gi|153006763|ref|YP_001381088.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Anaeromyxobacter sp. Fw109-5]
 gi|152030336|gb|ABS28104.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Anaeromyxobacter sp. Fw109-5]
          Length = 758

 Score = 44.6 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
              + D  +G V+     D   NPAS  KL+T+    
Sbjct: 78  GVVVADVASGEVLYARDADVLLNPASNVKLVTSAAAL 114


>gi|157956220|gb|ABW06479.1| extended-spectrum beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 235

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 54/208 (25%), Gaps = 12/208 (5%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 32  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 89

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 90  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 149

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 150 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 205

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G KTG       N +A     D+
Sbjct: 206 ASWVVGDKTGSGGYGTTNDIAVIWPKDR 233


>gi|313888977|ref|ZP_07822636.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312844963|gb|EFR32365.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 262

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 60/216 (27%), Gaps = 12/216 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
            D + G        D     AS+ KL+     F    + K  L   I++           
Sbjct: 27  YDLDLGEG-FSINGDQQVPSASMIKLLILLKAFDECDKGKLNLEDTISLDDYERVDGSGI 85

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                 +       L  L++  +++ A  I   L        + +N      GL  T   
Sbjct: 86  LKELYRNHKFSIRELLTLMIIVSDNTATNILIDLL-----GREEINKIGHEFGLEKTILQ 140

Query: 154 NAHG-----VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                         ++T++ ++  L   I         Y ++    +  ++  +      
Sbjct: 141 RKMMDSLAKEKGLDNFTSSNEILKLLKMIYEKNFVNEDYSELALDILLRQQERDRLQRYL 200

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                   K+G       +         ++ I V+L
Sbjct: 201 PEDLKIANKSGDLDNLENDGGIFFTTN-KNYILVVL 235


>gi|120608890|ref|YP_968568.1| beta-lactamase [Acidovorax citrulli AAC00-1]
 gi|120587354|gb|ABM30794.1| beta-lactamase [Acidovorax citrulli AAC00-1]
          Length = 327

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 42/112 (37%), Gaps = 2/112 (1%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNS 94
            + G        D  W  AS  KL  A  V   +++ +  L   + +  ++  +   +  
Sbjct: 19  LDNGET-FAWQADRRWYLASSAKLPLAIAVLQEVQQGRLRLDQELRVEERDKIDGSGALV 77

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
               G+  +++  L+ +++ S N  A  +  ++              ++N+G
Sbjct: 78  WQPVGTQHSVETLLRRMLMDSDNTAANLLIRTIGPDTFNTRARALMGARNVG 129


>gi|94502861|gb|ABF29661.1| beta-lactamase [Enterobacter cloacae]
          Length = 230

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 54/208 (25%), Gaps = 12/208 (5%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 28  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 85

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 86  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 145

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 146 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G KTG       N +A     D+
Sbjct: 202 ASWVVGDKTGSGDYGTTNDIAVIWPKDR 229


>gi|94502857|gb|ABF29659.1| beta-lactamase [Enterobacter cloacae]
 gi|94502871|gb|ABF29666.1| beta-lactamase [Enterobacter cloacae]
          Length = 228

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 54/208 (25%), Gaps = 12/208 (5%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 85  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 144

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 145 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 200

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G KTG       N +A     D+
Sbjct: 201 ASWVVGDKTGSGDYGTTNDIAVIWPKDR 228


>gi|126471119|dbj|BAF48064.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 294

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + + +        
Sbjct: 54  LLDTASGRRI-SHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAP 112

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 113 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 172

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 173 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 232

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 233 RWRVGDKTGSNGEDARNDIAVLW 255


>gi|325282281|ref|YP_004254822.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Deinococcus proteolyticus MRP]
 gi|324314090|gb|ADY25205.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Deinococcus proteolyticus MRP]
          Length = 459

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 22/56 (39%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
            + D  TG V        P  PAS TKL+TA  V   L       +T +T+     
Sbjct: 80  LVQDLVTGEVRESLNSRAPMIPASTTKLVTAAAVLGELNGMDGWWSTELTVPAAEW 135


>gi|148975586|ref|ZP_01812457.1| beta-lactamase [Vibrionales bacterium SWAT-3]
 gi|145965014|gb|EDK30265.1| beta-lactamase [Vibrionales bacterium SWAT-3]
          Length = 287

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 81/261 (31%), Gaps = 19/261 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPY-------------YTLLDTNTGHVIAENYP 47
           M+++   +A+ +LS  F   S++++ K                  + D+ T         
Sbjct: 1   MKKY-TSLALVLLSAFFSTSSLSQSLKPESIEQIESRVSARIGVAVYDSATKQT-WSYKG 58

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  +   S  K +    +    + K   L + ++I           +       ++L +A
Sbjct: 59  DERFPMMSTFKTLACANLLYDAENKGLDLDSKVSIKSRDLIVWSPVTKELVDKGISLRDA 118

Query: 108 LKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
               +  S N     +   +       +F++ + +++           +A         T
Sbjct: 119 CSATMTMSDNTAVNIVLGGIGGPNALTQFLRSIGDSNTRFDHLEPELNHARPGDARDTTT 178

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
               +  L+  + +D         +KG  +  K       ++         ++G      
Sbjct: 179 PNSIVMTLNELMYSDTLSQASKATLKGWMMGNKVSDGMFRSILPSGWNIADRSGAGAYGS 238

Query: 226 FNIVASAIQGDQS--LIAVIL 244
             I A      ++  +I+V L
Sbjct: 239 RAITAIVWSEHRAPLIISVAL 259


>gi|6468740|emb|CAB61637.1| class A beta-lactamase FONA-2 [Serratia fonticola]
          Length = 295

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 75/280 (26%), Gaps = 26/280 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------------LLD-TNTGHV 41
           +R+  +++A  M          A+T                         L+D  +   +
Sbjct: 6   LRKTTLMVATVMPLLFSSAPLWAQTANAKANIQQQLSELEKNSGGRLGVALIDTADNSQI 65

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    +    +  K +L   + I ++        +     + 
Sbjct: 66  LY--RGDERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYNPIAEKHLDTG 123

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       I  S N     I E L    K  +F + + + +  L  +      A    
Sbjct: 124 MTLAEFSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTEPTLNTAIPGD 183

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                +       L               Q+            +  A        G KTG
Sbjct: 184 PRDTSSPLAMAKSLQNLTLGKALGEPQRAQLVEWMKGNTTGGASIRAGLPTTWIVGDKTG 243

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                  N +A     +   L+ V      +  +N  +  
Sbjct: 244 SGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|326315035|ref|YP_004232707.1| beta-lactamase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371871|gb|ADX44140.1| beta-lactamase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 364

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 41/112 (36%), Gaps = 2/112 (1%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNS 94
            + G        D  W  AS  KL  A  V   +++    L   + +  ++  +   +  
Sbjct: 52  LDNGET-FAWEADRRWYLASSAKLPLAIAVLQEVQQGHLRLDQELRVEERDKIDGSGALV 110

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
               G+  +++  L+ +++ S N  A  +  ++              ++N+G
Sbjct: 111 WQPVGTQHSVETLLRRMLMDSDNTAANLLIRTIGLDTFNTRAQALMGARNVG 162


>gi|260459851|ref|ZP_05808105.1| Beta-lactamase [Mesorhizobium opportunistum WSM2075]
 gi|259034653|gb|EEW35910.1| Beta-lactamase [Mesorhizobium opportunistum WSM2075]
          Length = 231

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/237 (10%), Positives = 55/237 (23%), Gaps = 27/237 (11%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DHPWNPASLTKLMTAYV 64
           ++  +A L         A    +    + D  +G  + ++   D  ++PAS  K+  + +
Sbjct: 14  ILFLLAWLLGFPMRAQSAPLGDVQCTLIADAASGKTLYQDGICDQRFSPASTFKVPLSLI 73

Query: 65  VFSFLKEKKAMLTTP--ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            +                              T                 +         
Sbjct: 74  GYDA---GILSGEHTPAWDYKPEFKAVKRDQKTVDPVIWERDSIIWYSREI--------- 121

Query: 123 IAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
                  T +   +        LG   +      G      ++       ++   + DF 
Sbjct: 122 -------TRRLGNEKFAGYVSKLGYGNSDVSGNPGKDDSLTHSWVNSSLKITPVEQVDFL 174

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           + +   Q+                          KTG T      +   A +  +SL
Sbjct: 175 RKLLARQLPVSAKAYDMTSAIIPTFQAGGWTVQGKTGSTR-----LGGDADKDKRSL 226


>gi|84468550|dbj|BAE71359.1| beta-lactamase [Vibrio cholerae non-O1/non-O139]
 gi|84468554|dbj|BAE71361.1| beta-lactamase [Vibrio cholerae non-O1/non-O139]
 gi|240282411|gb|ACS54273.1| beta-lactamase PSE1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 329

 Score = 44.6 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 43  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 101

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 102 FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 161

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 162 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 221

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 222 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 281

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 282 TAVVWSEHQAPIIV 295


>gi|126149275|dbj|BAF47410.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 294

 Score = 44.6 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + + +        
Sbjct: 53  LLDTASGRRI-SHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAP 111

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 112 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 171

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 172 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 231

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 232 RWRVGDKTGSNGEDARNDIAVLW 254


>gi|328956441|ref|YP_004373827.1| putative beta-lactamase (class A) precursor [Carnobacterium sp.
           17-4]
 gi|328672765|gb|AEB28811.1| putative beta-lactamase (class A) precursor [Carnobacterium sp.
           17-4]
          Length = 263

 Score = 44.6 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 3/109 (2%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKK 98
            ++     +  +  AS+ KL      +    + K  L   + +SK               
Sbjct: 29  QLLFSKNKEELFPSASIIKLPIYLYYYEQAIQGKLNLMDRVNVSKKGRANGSGVMHVLTS 88

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               +++  L+L+I  S N+    +        +     M   + N G+
Sbjct: 89  IEDWSIEELLQLMIAVSDNEATNQLISYAGL--ENLQVWMKEKTWNEGV 135


>gi|229819194|ref|YP_002880720.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Beutenbergia cavernae DSM 12333]
 gi|229565107|gb|ACQ78958.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Beutenbergia cavernae DSM 12333]
          Length = 464

 Score = 44.6 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
             P   + D  TG V+     +    PAS  KL+TA
Sbjct: 90  SPPGVVVADVATGEVLVSADAETGRAPASTLKLLTA 125


>gi|229017842|ref|ZP_04174725.1| Beta-lactamase [Bacillus cereus AH1273]
 gi|229024043|ref|ZP_04180518.1| Beta-lactamase [Bacillus cereus AH1272]
 gi|228737256|gb|EEL87776.1| Beta-lactamase [Bacillus cereus AH1272]
 gi|228743433|gb|EEL93550.1| Beta-lactamase [Bacillus cereus AH1273]
          Length = 348

 Score = 44.6 bits (103), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+          L   IT +K         
Sbjct: 111 IDTGTNRTIAYR-PNERFAYASTYKALAAGVLLQQNSID--KLNEVITYTKEDLVEYSPI 167

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +           
Sbjct: 168 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMADRFEPE 227

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 228 LNEATPGDIRDTSTAKAIATNLKAFTVGNALPAHKRNILTEWMKGNATGDKLIRAGVPTD 287

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 288 WIVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 332


>gi|65318837|ref|ZP_00391796.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Bacillus anthracis
           str. A2012]
          Length = 129

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 20/81 (24%)

Query: 248 DRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
             ++      +L   GF      K +         +                  E    +
Sbjct: 2   SASSDWDDHMNLFDKGFDRFEQTKVLGQGALAEITEKKYANHVYTKNSFSVPLTEEEKKS 61

Query: 308 TQMKEAKDKESHFIDFEKITL 328
             +K   DK +  +D  K+  
Sbjct: 62  VVLKVELDKSAKLVDGVKVGK 82


>gi|308097803|gb|ADO14462.1| oxacillinase OXA-114f [Achromobacter xylosoxidans]
          Length = 275

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 58/255 (22%), Gaps = 11/255 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + PAS  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQGTQQACAERYTPASTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAKA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    K+ G      +++  +         R    L  R 
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGKHNGTDGAWIISSLRISPLEQLAFLR---KLVNRQ 178

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                      +      +   +           G++G+ T          V  A +  +
Sbjct: 179 LPVKAAAYELAENLFEVGQADGWRLYGKTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLIAVILGALDRNTR 252
            L+   L   +R TR
Sbjct: 237 QLVYARLLQDERATR 251


>gi|158522236|ref|YP_001530106.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Desulfococcus
          oleovorans Hxd3]
 gi|158511062|gb|ABW68029.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Desulfococcus
          oleovorans Hxd3]
          Length = 435

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 5/68 (7%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNK-----LPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
          ++  AM + +  F                    +   + G V+    PD    PAS+ K+
Sbjct: 30 VLATAMVLCTVAFAPAFAERPLSQLLEPGDSVLVQRMDDGRVVLAENPDTLLVPASILKI 89

Query: 60 MTAYVVFS 67
          +T+   F 
Sbjct: 90 VTSLAAFE 97


>gi|295837285|ref|ZP_06824218.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Streptomyces sp. SPB74]
 gi|295826451|gb|EFG64864.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Streptomyces sp. SPB74]
          Length = 457

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%)

Query: 11 AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
          A+   + P L +    K P  +++D  +G  +  +       PAS+TK+ TA      L 
Sbjct: 19 ALAGRLDPLLGVHALGKGPAASVVDLTSGEQVYGDRATASATPASVTKIATAVAALDALG 78

Query: 71 EKK 73
             
Sbjct: 79 PGH 81


>gi|260913959|ref|ZP_05920433.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Pasteurella dagmatis ATCC 43325]
 gi|260632046|gb|EEX50223.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Pasteurella dagmatis ATCC 43325]
          Length = 489

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 4  FLVIIAMAMLSNIFPFLSIA--------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
           +  +A+  L + F + S+                    +     +IAE+  +    PAS
Sbjct: 19 LVTKLALFCLFSPFAYTSVDVSSLNQVLPDGTSSSVIAKNLTRNEIIAEHQANTFMLPAS 78

Query: 56 LTKLMTAYVV 65
            K++TA   
Sbjct: 79 TQKVLTALTA 88


>gi|78048849|ref|YP_365024.1| beta-lactamase precursor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037279|emb|CAJ25024.1| beta-lactamase precursor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 297

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   D  +   S  K + A  V   + + K  L   + I  +       
Sbjct: 55  LLDSATGKRLGQR-EDERFPMCSTFKFVLAAAVLRRVDQGKLTLAQQVRIRASDMLEHAP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHVGGSLSVGELCRATMIYSDNPAANLLFPLVGEPAGVTAFLRGIGDAQTRTDRYEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A   A L   +  D        Q+    I  +   +   A  T 
Sbjct: 174 QMNRFADDDPRDTTTPAAMAATLRTLLLGDALHPASRKQLTDWMIDNRTGDDCLRAGLTA 233

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 234 GWKIGDKTGSNGTDTRNDIAILW 256


>gi|115017|sp|P10424|BLA1_BACCE RecName: Full=Beta-lactamase 1; AltName: Full=Beta-lactamase I;
           AltName: Full=Penicillinase; Flags: Precursor
 gi|551722|gb|AAA22668.1| beta-lactamase I precursor (ttg start codon) [Bacillus cereus]
          Length = 306

 Score = 44.6 bits (103), Expect = 0.022,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 61/225 (27%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 69  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 126 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 186 LNEAIPGDIRDTSTAKAIARNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
             D  K+G       N +A     ++  +I  IL + D       
Sbjct: 246 WVDADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 290


>gi|117920430|ref|YP_869622.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella sp. ANA-3]
 gi|117612762|gb|ABK48216.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella sp. ANA-3]
          Length = 513

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 15/81 (18%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAE---TNKLPY-----------YTLL-DTNTGHVIAEN 45
          ++  L+   ++ML +     +I     +                  L  D +T  ++   
Sbjct: 19 IKGLLLGSLVSMLLSTQAHAAIHPMDESILAKQIADIAPRHSQVALLARDLSTNTLLYSQ 78

Query: 46 YPDHPWNPASLTKLMTAYVVF 66
            D  + PAS  K++TA    
Sbjct: 79 QADTLFIPASTQKVLTAVTAL 99


>gi|149920699|ref|ZP_01909164.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Plesiocystis pacifica SIR-1]
 gi|149818486|gb|EDM77935.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Plesiocystis pacifica SIR-1]
          Length = 543

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++D  +G V+     D   NPAS  KL+T     
Sbjct: 115 VVDLASGEVLYAREADRALNPASNAKLVTTAAAL 148


>gi|37955063|gb|AAP22374.1| carbenicillin-hydrolyzing beta-lactamase [Vibrio cholerae
           non-O1/non-O139]
          Length = 288

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 76/256 (29%), Gaps = 16/256 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI-----------AETNKLP-YYTLLDTNTGHVIAENYPD 48
           M+  L + A+ M S +F   S              +        +LDT  G    +   D
Sbjct: 1   MKSLL-VFALLMPSVVFASSSKFQSVEQEIKGIESSLSARIGVAILDTQNGES-WDYNGD 58

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K +    +    +  K  L + + + K            + G  +TL +A 
Sbjct: 59  QRFPLTSTFKTIACAKLLYDAEHGKVNLNSTVEVKKADLVTYSPVLEKQVGKPITLSDAC 118

Query: 109 KLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +  +    K+   F++ + +    L                   T 
Sbjct: 119 FATMTTSDNTAANIVINAVGDPKSITDFLRQIGDKETRLDRVEPELNEGKLGDLRDTTTP 178

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
               + L+  +           +++   +  +   N   +V     +   ++G       
Sbjct: 179 NAITSTLNQLLFGSTLSEASQKKLESWMVNNQVTGNLLRSVLPVTWSIADRSGAGGFGAR 238

Query: 227 NIVASAIQGDQSLIAV 242
           +I A     ++  I V
Sbjct: 239 SITAIVWSEEKKPIIV 254


>gi|262163954|ref|ZP_06031693.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM223]
 gi|262027482|gb|EEY46148.1| D-alanyl-D-alanine carboxypeptidase [Vibrio mimicus VM223]
          Length = 481

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNK-----LPYYTLL-DTNTGHVIAENYPDHPWNPAS 55
          R FL+   +  +S+++    +            Y  ++ DT +     E      + PAS
Sbjct: 8  RWFLLFFGLLCVSSVYAESLVNSAINKLPAGSRYALMVEDTVSKQTTLELNTHLYYPPAS 67

Query: 56 LTKLMTAYVV 65
            K++TA   
Sbjct: 68 TQKILTALAA 77


>gi|222096077|ref|YP_002530134.1| beta-lactamase [Bacillus cereus Q1]
 gi|221240135|gb|ACM12845.1| beta-lactamase [Bacillus cereus Q1]
          Length = 265

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 28  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 84

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 85  TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 144

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 145 LNEAIPGDIRDTSTAKAIARNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 204

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 205 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 249


>gi|311745239|ref|ZP_07719024.1| putative beta-lactamase [Algoriphagus sp. PR1]
 gi|126577765|gb|EAZ81985.1| putative beta-lactamase [Algoriphagus sp. PR1]
          Length = 301

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 14/211 (6%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI-TISKNASEYPPSNSTFKKGSTMTLD 105
            D  ++ AS  K+     +F   +E K  L   I  +++  S    S+ +   G      
Sbjct: 63  ADEEFHAASTMKVPVMIELFKQEEEGKLNLDDSILLVNEFKSIVDGSSYSMDIGDDSDDI 122

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKF------VQHMNNTSKNLGLSATHFMNAHGVV 159
              K+    S ND+   +                  + +  T ++LG +    +      
Sbjct: 123 IYNKIGTKVSLNDLMYNMITVSSNLATNVLIELVDAKKVTATMRDLGAAKIEVLRGVEDQ 182

Query: 160 QHG-----HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
           +       + TTARD+  +   I  +        Q     +K +K+ N         G  
Sbjct: 183 KAYDLGLSNSTTARDLLEIMEAIALNEAGTQEDCQEMISILKDQKF-NEIIPFHLPEGVS 241

Query: 215 -GMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              KTG       +     +   +S + V+L
Sbjct: 242 VAHKTGSITGVHHDAGIVYLPDGRSYVLVLL 272


>gi|285019199|ref|YP_003376910.1| beta-lactamase class a protein [Xanthomonas albilineans GPE PC73]
 gi|283474417|emb|CBA16918.1| putative beta-lactamase class a protein [Xanthomonas albilineans]
          Length = 296

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 8/232 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            LLD+ TG  I        +   S  K +    V   +   +  L   + +         
Sbjct: 53  YLLDSGTGQRI-GRREQERFPLCSTFKFVLVVAVLQRVDRGEIGLDQQVRVRAADVVSYA 111

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL--SA 149
             +    G T+++D   +  ++ S    A  +   L        + +             
Sbjct: 112 PVTKPHVGGTLSVDALCRAAMIFSDGGAANLLLR-LVGDPPGLTRFLRAHGDTQTRSDRN 170

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWR-IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
              MNA  +      TT   MA      +  D  Q     ++    I  +   +   A  
Sbjct: 171 EPSMNAFALDDPRDTTTPAAMASTMRTLLLGDVLQPASRQRLIDWMIDNRTGDDCLRAGL 230

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKVSA 257
                 G KTG       N +A      +S   L+   L     ++  + +A
Sbjct: 231 PAGWRIGDKTGNNGTDSRNDIAIVWPPGRSAPLLLTAYLNMATVDSDARDAA 282


>gi|6225087|sp|Q45726|BLAC_BACTU RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|603515|emb|CAA58448.1| beta-lactamase [Bacillus thuringiensis]
          Length = 309

 Score = 44.6 bits (103), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 72  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 128

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 129 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRKMGDRVTMSDRFETE 188

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T  R    L      +         +               A     
Sbjct: 189 LNEAIPGDIRDTSTAKRIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 248

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D    +  
Sbjct: 249 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEASYD 293


>gi|34559244|gb|AAQ75378.1| beta-lactamase OXY-2 [Klebsiella oxytoca]
 gi|48473855|emb|CAG34106.1| class A beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGSGDYGTTNDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|28572595|ref|NP_789375.1| carboxypeptidase [Tropheryma whipplei TW08/27]
 gi|28410727|emb|CAD67113.1| putative carboxypeptidase [Tropheryma whipplei TW08/27]
          Length = 313

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 79/222 (35%), Gaps = 15/222 (6%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN--- 106
               AS++K++ A ++    +   + L     I+ +  +     ++ K G +        
Sbjct: 81  KHPIASISKVILALMLIE--RYSLSELNDGPNITYDTEDVSFFRNSVKDGDSYAPVYAGL 138

Query: 107 --ALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
              LK  ++      A   A SL      K + +         GL  T    A G+    
Sbjct: 139 TLTLKQSLIPLMLPSANNYATSLVKHLYGKSYPKFAREWLDKNGLYNTDIYEASGLDD-R 197

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           + +T  ++ +L+ +  ++          +          NTN A+G   G DG+KTG + 
Sbjct: 198 NVSTTDNLIVLAKKAYSNPVLRGIMRLKEASIPNIGLVRNTNKALGIN-GIDGIKTGSSP 256

Query: 223 ASGFNIVASA---IQGD-QSLIAVILGALDRNTRNKVSASLL 260
           A+  N++ +A    +     +  V        +      +LL
Sbjct: 257 AAKSNLLFTAAIKTKNGLIRIYGVFKTEKSYASLYGKLDTLL 298


>gi|217959991|ref|YP_002338547.1| beta-lactamase Bla1 [Bacillus cereus AH187]
 gi|217064014|gb|ACJ78264.1| beta-lactamase Bla1 [Bacillus cereus AH187]
          Length = 276

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 39  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 96  TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 155

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 156 LNEAIPGDIRDTSTAKAIARNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 215

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 216 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 260


>gi|282878441|ref|ZP_06287227.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella buccalis ATCC 35310]
 gi|281299427|gb|EFA91810.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella buccalis ATCC 35310]
          Length = 420

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 13/37 (35%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + D     VI  +       PAS  K++TA      
Sbjct: 79  MVYDLTADSVIYAHNERQLMRPASTMKVVTAITALDK 115


>gi|206973745|ref|ZP_03234663.1| beta-lactamase Bla1 [Bacillus cereus H3081.97]
 gi|206747901|gb|EDZ59290.1| beta-lactamase Bla1 [Bacillus cereus H3081.97]
          Length = 306

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 69  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 126 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 186 LNEAIPGDIRDTSTAKAIARNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 246 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 290


>gi|221229304|gb|ABO61006.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 72/260 (27%), Gaps = 29/260 (11%)

Query: 2   RQFL----VIIAMAMLSNIFPFLSIAETNKLP--YYT--------------------LLD 35
           R+FL      +A +    +    +   T   P                         LLD
Sbjct: 5   RRFLQFSGAAVASSFALPLLARAAGKATANAPTDAAITAASDFAALEKACAGRLGVTLLD 64

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
           T +G  I  +  D  +   S  K M A  V S  +   A+L   + + +         + 
Sbjct: 65  TASGRRI-GHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAPVTR 123

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              G  MT+ +  +  I+ S N  A  +            F++   +T            
Sbjct: 124 RHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEPELN 183

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +          T A   A L   +  +  Q     Q+    I  +       A       
Sbjct: 184 SFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGKRWR 243

Query: 214 DGMKTGFTCASGFNIVASAI 233
            G KTG       N +A   
Sbjct: 244 VGDKTGSNGEDARNDIAVLW 263


>gi|254468683|ref|ZP_05082089.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase [beta
          proteobacterium KB13]
 gi|207087493|gb|EDZ64776.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase [beta
          proteobacterium KB13]
          Length = 460

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP--YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
          M +F +II+  + +     L+I          Y++ + +TG        D  +N AS+ K
Sbjct: 1  MIRFFLIISFFVTTAYSQELAIKNKINPQDFAYSIKNISTGES-WSKDADKSFNFASVNK 59

Query: 59 LMTAYVVFSF 68
          L+TA +    
Sbjct: 60 LVTATIALDE 69


>gi|221067385|ref|ZP_03543490.1| Beta-lactamase [Comamonas testosteroni KF-1]
 gi|220712408|gb|EED67776.1| Beta-lactamase [Comamonas testosteroni KF-1]
          Length = 301

 Score = 44.6 bits (103), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 59/206 (28%), Gaps = 5/206 (2%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            ++DT +G   A    D  +   S  K + A  V    +  +  L   +  S        
Sbjct: 55  YVVDTVSGAE-AGWRGDERFPMCSTFKTLLAARVLYLAQRGEIRLWRKLYYSPAEVVAWS 113

Query: 92  SNSTFK--KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
             S  +      MT+    + ++V S N  A  + E+        ++++ M + +  L  
Sbjct: 114 PISEKRAGANGGMTVQELCEAMVVVSDNTAANVMLEASGGPAALTQWLREMGDGTTRLDR 173

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
           +      A    +    T    +  L   +  D  +      ++      +       + 
Sbjct: 174 NEPSLNTALPGDERDTTTPRAMVQSLQKLLLGDVLEGYARALLQQWLADSRTGDKRVRSG 233

Query: 208 GTFLGADGMKTGFTCASGFNIVASAI 233
                  G KTG              
Sbjct: 234 MPGDWKVGGKTGSGERGTACDTLIVW 259


>gi|32329439|emb|CAD58780.1| oxacillinase [Pseudomonas aeruginosa]
 gi|164511893|emb|CAO91943.1| oxacillinase Oxa45 [Pseudomonas aeruginosa]
          Length = 264

 Score = 44.2 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 65/259 (25%), Gaps = 28/259 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DHPWNPASLTKL 59
           MR    +I  A LS +F   + A+  +     + D  +G  +      D  + P S  K+
Sbjct: 1   MRGKHTVILGAALSALFAGAAGAQMLECT--LVADAASGQELYRKGACDKAFAPMSTFKV 58

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
             A + +                          N  +            +     +  + 
Sbjct: 59  PLAVMGYDAG-----------------ILVDAHNPRWDYKPEFNGYKFQQKTTDPTIWEK 101

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
              +  S   T K   +         G          G      ++       +S   + 
Sbjct: 102 DSIVWYSQQLTRKMGQKRFAAYVAGFGYGNGDISGEPGKSNGLTHSWLGSSLKISPEGQV 161

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN--------IVAS 231
            F + +   ++   +   +   +          A   KTG                 +  
Sbjct: 162 RFVRDLLSAKLPASKDAQQMTVSILPHFAAGDWAVQGKTGTGSFIDARGAKAPLGWFIGW 221

Query: 232 AIQGDQSLIAVILGALDRN 250
           A   ++ ++   + A  + 
Sbjct: 222 ATHEERRVVFARMTAGGKK 240


>gi|84497545|ref|ZP_00996367.1| putative carboxypeptidase [Janibacter sp. HTCC2649]
 gi|84382433|gb|EAP98315.1| putative carboxypeptidase [Janibacter sp. HTCC2649]
          Length = 465

 Score = 44.2 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +++  TG ++    P     PAS  KL+TA+V  
Sbjct: 114 VVEVATGRILWAKNPTVARVPASNEKLVTAFVAL 147


>gi|196033876|ref|ZP_03101287.1| beta-lactamase Bla1 [Bacillus cereus W]
 gi|195993556|gb|EDX57513.1| beta-lactamase Bla1 [Bacillus cereus W]
          Length = 306

 Score = 44.2 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 69  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 126 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 186 LNEAIPGDIRDTSTAKAIAKNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 246 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 290


>gi|311746322|ref|ZP_07720107.1| hypothetical protein ALPR1_07920 [Algoriphagus sp. PR1]
 gi|126576558|gb|EAZ80836.1| hypothetical protein ALPR1_07920 [Algoriphagus sp. PR1]
          Length = 435

 Score = 44.2 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK------LPYYTLLDTNTGHVIAENYPDHPWNPA 54
          M++ LV + + + S     ++ +  N          + LLD  +  V+ +   D  + PA
Sbjct: 1  MKKLLVGLLILVSSCTVQKINKSLKNSDVLSQGHMGFMLLDPESDKVLVDINSDKYFIPA 60

Query: 55 SLTKLMTAYV 64
          S TKL T Y 
Sbjct: 61 SNTKLFTFYT 70


>gi|119384064|ref|YP_915120.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Paracoccus
          denitrificans PD1222]
 gi|119384318|ref|YP_915374.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Paracoccus
          denitrificans PD1222]
 gi|119373831|gb|ABL69424.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Paracoccus
          denitrificans PD1222]
 gi|119374085|gb|ABL69678.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Paracoccus
          denitrificans PD1222]
          Length = 484

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          ++D  +G V+AE  P+    PAS  K +TA     
Sbjct: 55 VIDPASGQVLAERQPEPSMAPASTLKAVTALYALD 89


>gi|6977955|emb|CAB75347.1| L2 b-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 66/261 (25%), Gaps = 30/261 (11%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYT---------------------------LL 34
           R+FL     A+ S++F    +                                     +L
Sbjct: 5   RRFLQFSGAAVASSLFAPALVQP-VSASSGIPAANAAIAGAADFAALEKASGGRLGVTVL 63

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           +T  G  I  +  D  +   S  K M    V S     +  L T + I+          +
Sbjct: 64  NTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAPVA 123

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHF 152
               G  +T+ +  +  +  S N  A  +            F++   ++      +    
Sbjct: 124 RRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEPDV 183

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                       + A     L+     +  Q     Q     I  +       A      
Sbjct: 184 NLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRRQFADWLIDNQTGDACLRAGLGKRW 243

Query: 213 ADGMKTGFTCASGFNIVASAI 233
             G KTG       N +A   
Sbjct: 244 RVGDKTGSNGDDTRNDIAVLW 264


>gi|313575239|emb|CBI71182.1| beta-lactamase class A [uncultured bacterium]
          Length = 345

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 16/102 (15%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYY---------------TLLDTNTGHVIAENYPDH 49
           +  +A+ +L         A     P                  +LD  T           
Sbjct: 11  VAAVAVGLLFPACAAPVGATATTAPVAELDSVPQVSSGRLGVAILDFQTSKT-YHINGKD 69

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            +   S+ K M+A VV   + E K  L   I +  +      
Sbjct: 70  RFPMQSVFKAMSAVVVMREVDEGKLTLDQEIPVGPDDISVYW 111


>gi|7243960|gb|AAB19430.2| carbenicillinase-3 beta-lactamase [Pseudomonas aeruginosa]
          Length = 304

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 18  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 76

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 77  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 136

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 137 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 197 IASTLNKLLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 256

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 257 TAVVWSEHQAPIIV 270


>gi|1705474|sp|P23954|BLO2_KLEOX RecName: Full=Beta-lactamase OXY-2; AltName: Full=Penicillinase;
           Flags: Precursor
 gi|1226010|emb|CAA88908.1| beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 44.2 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|291007334|ref|ZP_06565307.1| beta-lactamase class A-like protein [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 272

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 10/219 (4%)

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           V+         +PAS  K++        ++     L T +                    
Sbjct: 49  VLFG--ARRVVHPASTIKVLVMLTALREVQRGGLALDTEVRFPDERVGGAGVLKDLPGLR 106

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG--V 158
            + L +A+ L+I  S N    A+ E++        + +   +  LG   T          
Sbjct: 107 CLELADAITLMISISDNTATNAVIEAV------GFEAVGELAAELGCEGTQVQRLLMRVQ 160

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
               + T A D A +   +           Q     +  ++  +   A+         KT
Sbjct: 161 DPGRNTTCALDQARILDSLARGTVLPPRLTQHALWVLSRQQVRDRLPALLPEGARCWNKT 220

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           G    S  ++           +  +L     + R   + 
Sbjct: 221 GEIDGSRHDVALIGDHERPRAVVAVLVDELADHRAGAAR 259


>gi|282880370|ref|ZP_06289081.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305726|gb|EFA97775.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella timonensis CRIS 5C-B1]
          Length = 420

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D     V+ +        PAS  KL+TA      
Sbjct: 80  VYDLTADSVLYKYNERQHLRPASTMKLITAITALDQ 115


>gi|134100412|ref|YP_001106073.1| beta-lactamase class A-like protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133913035|emb|CAM03148.1| beta-lactamase class A-like protein [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 252

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 10/219 (4%)

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           V+         +PAS  K++        ++     L T +                    
Sbjct: 29  VLFG--ARRVVHPASTIKVLVMLTALREVQRGGLALDTEVRFPDERVGGAGVLKDLPGLR 86

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG--V 158
            + L +A+ L+I  S N    A+ E++        + +   +  LG   T          
Sbjct: 87  CLELADAITLMISISDNTATNAVIEAV------GFEAVGELAAELGCEGTQVQRLLMRVQ 140

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
               + T A D A +   +           Q     +  ++  +   A+         KT
Sbjct: 141 DPGRNTTCALDQARILDSLARGTVLPPRLTQHALWVLSRQQVRDRLPALLPEGARCWNKT 200

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
           G    S  ++           +  +L     + R   + 
Sbjct: 201 GEIDGSRHDVALIGDHERPRAVVAVLVDELADHRAGAAR 239


>gi|5410529|gb|AAD43097.1|AF153200_1 beta-lactamase Pse-1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 332

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 78/254 (30%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 46  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 104

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 105 FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 164

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 165 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 224

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  + +   +  +   N   +V         ++G       +I
Sbjct: 225 IASTLNKFLFGSALSEMNQKKKESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 284

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 285 TAVVWSEHQAPIIV 298


>gi|289663341|ref|ZP_06484922.1| beta lactamase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 297

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 65/228 (28%), Gaps = 6/228 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLD+ TG  + +   D  +   S  K + A  V   + + K ML   + I  +       
Sbjct: 55  LLDSATGWHLGQRQ-DERFPMCSTFKFVLAAAVLQRVDQGKLMLAQRVKIRASDMLEYDP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G ++++    +  ++ S N  A  +            F++ + +          
Sbjct: 114 VTERHIGGSLSVGELCRATMIYSDNPAANLLFPLVGDPAGVTAFLRSIGDAQTCSDRHEP 173

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T A     L   +  D  +     Q+    I  +   +   A  T 
Sbjct: 174 DMNRFAAGDPRDTTTPAAMANTLRTLLLGDALRPASRKQLTDWMIDNRTGDDCLRAGLTR 233

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
               G KTG       N +A           L+   L         + 
Sbjct: 234 DWKIGDKTGSNGIDTRNDIAILWPPKGRAPLLLTAYLNGAKVADAARD 281


>gi|115378030|ref|ZP_01465210.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Stigmatella
          aurantiaca DW4/3-1]
 gi|310818895|ref|YP_003951253.1| d-alanyl-d-alanine carboxypeptidase/
          d-alanyl-d-alanine-endopeptidase [Stigmatella
          aurantiaca DW4/3-1]
 gi|115364969|gb|EAU64024.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Stigmatella
          aurantiaca DW4/3-1]
 gi|309391967|gb|ADO69426.1| D-alanyl-D-alanine carboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Stigmatella
          aurantiaca DW4/3-1]
          Length = 745

 Score = 44.2 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 22/87 (25%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKL-----PYYTL-----------------LDTNTG 39
          +  L   A+ +L+    + +     +          L                 +  + G
Sbjct: 7  KSILAAAAVFILALPSAYAASPADKRAEREALKAALLDVIQTTPLKTSRVGIHMVSVDDG 66

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVF 66
           V+     D   NPAS  KL+TA    
Sbjct: 67 SVVFSQNADELLNPASNVKLVTAAAAL 93


>gi|1401342|gb|AAB03414.1| carbapenem-hydrolyzing beta-lactamase [Serratia marcescens]
          Length = 294

 Score = 44.2 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 67/260 (25%), Gaps = 19/260 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYPD 48
           +    + ++ +  + F   +                         +DT +G+       D
Sbjct: 8   KTASFLFSVCLALSAFNAHANKSDAAAKQIKKLEEDFDGRIGVFAIDTGSGNT-FGYRSD 66

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K   A  V   +++KK  +   +       EY    +T  KGS MTL +  
Sbjct: 67  ERFPLCSSFKGFLAAAVLERVQQKKLDINQKVKYESRDLEYHSPITTKYKGSGMTLGDMA 126

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN---LGLSATHFMNAHGVVQHGHYT 165
              +  S N     I E      +   + M +   N   L         A    +    T
Sbjct: 127 SAALQYSDNGATNIIMERFLGGPEGMTKFMRSIGDNEFRLDRWELELNTAIPGDKRDTST 186

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCA 223
                  L+     +          +              A        G KTG      
Sbjct: 187 PKAVANSLNKLALGNVLNAKVKAIYQNWLKGNTTGDARIRASVPADWVVGDKTGSCGAYG 246

Query: 224 SGFNIVASAIQGDQSLIAVI 243
           +  +      +    LI  I
Sbjct: 247 TANDYAVIWPKNRAPLIVSI 266


>gi|256374311|ref|YP_003097971.1| beta-lactamase [Actinosynnema mirum DSM 43827]
 gi|255918614|gb|ACU34125.1| beta-lactamase [Actinosynnema mirum DSM 43827]
          Length = 271

 Score = 44.2 bits (102), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 4/58 (6%)

Query: 23 AETNKLPYYTLLDTNTGHVIAENYPDHPWNP-ASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +        D   G V+  +       P AS+TKL+T+Y V   ++E       P
Sbjct: 11 PVDSAAVAAVSSD---GRVLGSHGDLERRYPLASVTKLLTSYAVLVAVEEGAVEWDDP 65


>gi|228915093|ref|ZP_04078690.1| Beta-lactamase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228844522|gb|EEM89576.1| Beta-lactamase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 312

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 75  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 296


>gi|32130555|gb|AAL78278.2| K1 beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|6468743|emb|CAB61639.1| beta-lactamase FONA-3 [Serratia fonticola]
          Length = 295

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 26/280 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------------LLD-TNTGHV 41
           +R+  +++   M          A+T                         L+D  +   +
Sbjct: 6   LRKTTLMVTTVMPLLFGSAPLWAQTANAKANIQQQLSELEKNSGGRLGVALIDTADNSQI 65

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    +    +  K +L   + I ++        +     + 
Sbjct: 66  LY--RGDERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYNPIAEKHLDTG 123

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       I  S N     I E L    K  +F + + + +  L  +      A    
Sbjct: 124 MTLAEFSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTEPTLNTAIPGD 183

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +       L               Q+            +  A        G KTG
Sbjct: 184 KRDTTSPLAMAKSLQNLTLGKALGEPQRAQLVEWMKGNTTGGASIRAGLPTTWVVGDKTG 243

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                  N +A     +   L+ V      +  +N  +  
Sbjct: 244 SGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|65319793|ref|ZP_00392752.1| COG2367: Beta-lactamase class A [Bacillus anthracis str. A2012]
          Length = 296

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 59  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 115

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 116 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 175

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 176 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTN 235

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 236 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 280


>gi|299141567|ref|ZP_07034703.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella oris C735]
 gi|298576903|gb|EFI48773.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella oris C735]
          Length = 420

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/257 (10%), Positives = 58/257 (22%), Gaps = 24/257 (9%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + D +    I          PAS  KL+TA      L       T      K  +    
Sbjct: 78  MVYDLDADSTIFAFNEHQLMRPASTMKLVTAITAIDRLGGDYQFKTELCYTGKIENNKLV 137

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
            +     G     +       V++   + V   E         ++      +       +
Sbjct: 138 GDIYCVGGFDPRFNTDDLNAFVEAIRKMGVDTIEGH-LYADLSMKDTKQYGEGWCWDDKN 196

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI--------KGLEIKGKKYPNT 203
            +    +        AR +  L               +         +   I        
Sbjct: 197 PVLTPLLFSGKDIFMARFLDALVAHGIYVDANIDEKRKPADAFCIVNRFHTIDQILMRML 256

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA------ 257
             +   +  A   +   +  +      SA   ++ L+  I G      +    +      
Sbjct: 257 KESNNLYAEAMYYQIAASTGNHPASARSARAVERRLVDKI-GLDASRYKFADGSGLSLYN 315

Query: 258 --------SLLSMGFYN 266
                    +L   + N
Sbjct: 316 YVSAELEVKMLRYAYKN 332


>gi|84687931|ref|ZP_01015797.1| possible penicillin binding protein [Maritimibacter alkaliphilus
          HTCC2654]
 gi|84664068|gb|EAQ10566.1| possible penicillin binding protein [Rhodobacterales bacterium
          HTCC2654]
          Length = 490

 Score = 44.2 bits (102), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + D  TG ++ +        PAS+ K +TA   F 
Sbjct: 57 VVSDAKTGLILEQRNAAVAMPPASVAKSVTALYAFD 92


>gi|271970345|ref|YP_003344541.1| D-alanyl-D-alanine carboxypeptidase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270513520|gb|ACZ91798.1| D-alanyl-D-alanine carboxypeptidase (penicillin- binding protein
           4)-like protein [Streptosporangium roseum DSM 43021]
          Length = 459

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
              +LD  TG  +  +  D    PAS TKL+T
Sbjct: 89  GAVVLDAETGATLFGSGADGGVTPASTTKLVT 120


>gi|172041384|ref|YP_001801098.1| putative penicillin-binding protein 4 [Corynebacterium urealyticum
           DSM 7109]
 gi|171852688|emb|CAQ05664.1| putative penicillin-binding protein 4 [Corynebacterium urealyticum
           DSM 7109]
          Length = 458

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 14/37 (37%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
              + D  TG VI  N       PAS TK+ T     
Sbjct: 82  SAEITDLETGEVIYANNEGKHLVPASSTKVYTTAAAL 118


>gi|16506936|gb|AAL17873.1| K1 beta-lactamase OXY-2 [Klebsiella oxytoca]
          Length = 290

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|297179873|gb|ADI23933.1| oxacillinase OXA-114b [Achromobacter xylosoxidans]
 gi|317406567|gb|EFV86760.1| oxacillinase OXA-114a [Achromobacter xylosoxidans C54]
          Length = 275

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 22/243 (9%), Positives = 55/243 (22%), Gaps = 11/243 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + PAS  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQGTQQACAERYTPASTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAKA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    K+ G      +++  +         R +      +
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGKHNGTDGAWIISSLRISPLEQLAFLRKLVNRQLPV 181

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           K    +        G     + Y           G++G+ T          V  A +  +
Sbjct: 182 KAAAYELAENLFEAGQADGWRLYG---KTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLI 240
            L+
Sbjct: 237 QLV 239


>gi|229139183|ref|ZP_04267758.1| Beta-lactamase [Bacillus cereus BDRD-ST26]
 gi|228644242|gb|EEL00499.1| Beta-lactamase [Bacillus cereus BDRD-ST26]
          Length = 312

 Score = 44.2 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 75  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIARNLKDFTVGNALPHQKRNILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSSKDEKEATYD 296


>gi|282852869|ref|ZP_06262210.1| conserved domain protein [Lactobacillus gasseri 224-1]
 gi|282555977|gb|EFB61598.1| conserved domain protein [Lactobacillus gasseri 224-1]
          Length = 75

 Score = 44.2 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 19/66 (28%), Gaps = 17/66 (25%)

Query: 1  MRQ-------FLVIIAMAMLSNIFPFLSIAETNK----------LPYYTLLDTNTGHVIA 43
          MR+        + ++   ++  I P    A +                  +D  +G V+ 
Sbjct: 1  MRKYKVKWFSIISLLVCILIFWIKPITVKASSINNYHQEQVELQAKSAIAIDLKSGQVLY 60

Query: 44 ENYPDH 49
              D 
Sbjct: 61 AKNADK 66


>gi|254489962|ref|ZP_05103157.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Methylophaga thiooxidans DMS010]
 gi|224465047|gb|EEF81301.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Methylophaga thiooxydans DMS010]
          Length = 465

 Score = 44.2 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 18 PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            L +  T       ++++NT   +  +  D    PAS+ KL+TA   
Sbjct: 28 ASLPLLPTGSEASILVVESNTNKTLLNHRSDTLRPPASVQKLVTALAA 75


>gi|34559246|gb|AAQ75379.1| beta-lactamase OXY-2b [Klebsiella oxytoca]
 gi|48473857|emb|CAG34107.1| class A beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 44.2 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 68/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  + +   
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTESTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGSGDYGTTNDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|329956409|ref|ZP_08297006.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides clarus YIT 12056]
 gi|328524306|gb|EGF51376.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides clarus YIT 12056]
          Length = 482

 Score = 44.2 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 11/87 (12%), Positives = 26/87 (29%), Gaps = 21/87 (24%)

Query: 1  MRQFLVI---IAMAMLSNIFPFLSIAETNKL------------------PYYTLLDTNTG 39
          MR++++    + + ++ +I     ++                          ++ D    
Sbjct: 7  MRKYILFPIVLVLTLIPSILSAQGVSPETNSLSSRLDTLIKYRLPAGSNVSISVYDLTAD 66

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVF 66
            +     D    PAS  KL+T     
Sbjct: 67 KALYSYQADKLSRPASTMKLLTTITAL 93


>gi|302544859|ref|ZP_07297201.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302462477|gb|EFL25570.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces himastatinicus ATCC 53653]
          Length = 439

 Score = 44.2 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 21/54 (38%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            S+A         +LD+ +  VI  +       PAS TKL TA      L  + 
Sbjct: 70  PSLANDGSSLSGVVLDSASDEVIWGHNASTALMPASNTKLATATAALDQLGPEH 123


>gi|228901086|ref|ZP_04065292.1| Beta-lactamase [Bacillus thuringiensis IBL 4222]
 gi|228965469|ref|ZP_04126555.1| Beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228794199|gb|EEM41717.1| Beta-lactamase [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228858537|gb|EEN02991.1| Beta-lactamase [Bacillus thuringiensis IBL 4222]
          Length = 312

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|219920933|emb|CAQ76644.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920945|emb|CAQ76650.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|255046262|gb|ACU00153.1| extended-spectrum beta-lactamase CTX-M-114 [Providencia rettgeri]
          Length = 291

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 70/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K M    V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKAMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGGYGTTNDIAVIWPKDRAPLILVT 264


>gi|218897489|ref|YP_002445900.1| beta-lactamase Bla1 [Bacillus cereus G9842]
 gi|218545254|gb|ACK97648.1| beta-lactamase Bla1 [Bacillus cereus G9842]
          Length = 312

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRKMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKCKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D    +  
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEASYD 296


>gi|32130561|gb|AAL78282.3| K1 beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 44.2 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 67/238 (28%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|158319959|ref|YP_001512466.1| beta-lactamase [Alkaliphilus oremlandii OhILAs]
 gi|158140158|gb|ABW18470.1| beta-lactamase [Alkaliphilus oremlandii OhILAs]
          Length = 257

 Score = 43.8 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 72/230 (31%), Gaps = 6/230 (2%)

Query: 25  TNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                   ++ + N G +I +   D+ +  AS  KL+    +   +KE K  +   I I+
Sbjct: 12  DIDGNVAVVIKNFNNGEII-QINQDYIFPSASTIKLVIMSELLKQVKENKLSINETIVIT 70

Query: 84  KNASE-YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE-KKFVQHMNNT 141
                           G   TL   + L+I+ S N     + + +      +  Q +   
Sbjct: 71  DKMITGGDGILKELNVGHRFTLGEIMTLMIIISDNTATNLLIDIVGMDNVNRMAQELGLK 130

Query: 142 SKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
              L       +         +YT+A+DM  +            +Y ++    +K ++  
Sbjct: 131 RTKLQRKMMDSVAVK--YGRENYTSAQDMLNILELTYKGENIDGYYSKMMLDILKRQQVG 188

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
                          KTG       ++    +   + +I V+      N 
Sbjct: 189 GRLNLYLPENTVIAHKTGDLDRLEHDVGIVYLPNCEYIICVLTNETKSNK 238


>gi|260888547|ref|ZP_05899810.1| beta-lactamase [Selenomonas sputigena ATCC 35185]
 gi|330838152|ref|YP_004412732.1| hypothetical protein Selsp_0298 [Selenomonas sputigena ATCC 35185]
 gi|260861744|gb|EEX76244.1| beta-lactamase [Selenomonas sputigena ATCC 35185]
 gi|329745916|gb|AEB99272.1| hypothetical protein Selsp_0298 [Selenomonas sputigena ATCC 35185]
          Length = 394

 Score = 43.8 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 16/222 (7%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGS 100
           + +++      PAS+ KL          K+    L  P++I++ N        + + +G 
Sbjct: 175 LYQSHA---MQPASMIKLFILAYAMQQAKDGTLSLAEPLSITEANIVGGAGQLNWYDRGK 231

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +T++  L+ +I  S N     + + L       +++++   +  G + T   +   +  
Sbjct: 232 QLTIEQLLERMITDSDNTATNILIDRL------GIENIDGYIRQKGYADTRLQHKMMLSN 285

Query: 161 HG--HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
            G  + ++ +D+  L   I         + +     +  +K  +              KT
Sbjct: 286 QGRPNLSSVKDIGTLLSLIYRGECVDYEHDKKMLQILSRQKDKDC-LPSALPAFLVANKT 344

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           G       +    A      LI V++    R+   + + +L 
Sbjct: 345 GEITGVYAD-GGIAWSDAGDLILVVMDENCRDR--QETIALF 383


>gi|150545|gb|AAA98218.1| beta-lactamase [Plasmid pBWH77]
          Length = 332

 Score = 43.8 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 35/134 (26%), Gaps = 11/134 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAI 123
             I  S N  A  +
Sbjct: 121 AAITMSDNSAANLL 134


>gi|257136312|gb|ACV44456.1| beta-lactamase OXY-2 [Klebsiella oxytoca]
          Length = 290

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|327334835|gb|EGE76546.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL097PA1]
          Length = 457

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 15/77 (19%)

Query: 12  MLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPDHPWNPASL 56
           +++ + P    A+                       ++D  TG  + ++  +    PAS 
Sbjct: 57  VVAAVAPTTPSAKPVPATIANRVKSAGAAPGVLGADIMDAATGETLYQSGQNSLLTPASN 116

Query: 57  TKLMTAYVVFSFLKEKK 73
            K++TA  +        
Sbjct: 117 LKVLTAIALLDCTDAGH 133


>gi|126734892|ref|ZP_01750638.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. CCS2]
 gi|126715447|gb|EBA12312.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. CCS2]
          Length = 490

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 16/44 (36%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
              + D  TG V+ +        PAS+TK  TA      L    
Sbjct: 57  GVLVADLQTGEVLEDIQSAKAQPPASVTKAFTALYAIEALGAGH 100


>gi|325204734|gb|ADZ00188.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M01-240355]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|325197700|gb|ADY93156.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          G2136]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|325135583|gb|EGC58200.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M0579]
 gi|325201557|gb|ADY97011.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M01-240149]
 gi|325207538|gb|ADZ02990.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          NZ-05/33]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|325133609|gb|EGC56269.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M13399]
 gi|325143795|gb|EGC66111.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M01-240013]
 gi|325206705|gb|ADZ02158.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M04-240196]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|325129581|gb|EGC52404.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          OX99.30304]
          Length = 329

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|325127608|gb|EGC50528.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          N1568]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|319409878|emb|CBY90192.1| K07259 D-alanyl-D-alanine carboxypeptidase /
           D-alanyl-D-alanine-endopeptidase (penicillin-binding
           protein 4) [Neisseria meningitidis WUE 2594]
          Length = 508

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 72  AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 109


>gi|316984395|gb|EFV63368.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Neisseria meningitidis H44/76]
          Length = 501

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 65  AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 102


>gi|315104910|gb|EFT76886.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL050PA2]
          Length = 457

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAVALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|314965440|gb|EFT09539.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL082PA2]
 gi|315094256|gb|EFT66232.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL060PA1]
 gi|327329234|gb|EGE70994.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL103PA1]
          Length = 457

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAVALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|314922404|gb|EFS86235.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL001PA1]
          Length = 457

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D  TG  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAATGETLYQSGQNSLLTPASNLKVLTAVALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|308389897|gb|ADO32217.1| penicillin-binding protein 3; D-alanyl-D-alanine
           carboxypeptidase/endopeptidase [Neisseria meningitidis
           alpha710]
          Length = 508

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 72  AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 109


>gi|304388301|ref|ZP_07370417.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria meningitidis ATCC 13091]
 gi|304337732|gb|EFM03885.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria meningitidis ATCC 13091]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|261393129|emb|CAX50735.1| D-alanyl-D-alanine carboxypeptidase (DD-peptidase;
          DD-carboxypeptidase) [Neisseria meningitidis 8013]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|254674218|emb|CBA10002.1| D-alanyl-D-alanine carboxypeptidase [Neisseria meningitidis
           alpha275]
          Length = 508

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 72  AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 109


>gi|254804386|ref|YP_003082607.1| probable D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha14]
 gi|254667928|emb|CBA04118.1| probable D-alanyl-D-alanine carboxypeptidase [Neisseria
           meningitidis alpha14]
          Length = 508

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 72  AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 109


>gi|161869423|ref|YP_001598590.1| penicillin-binding protein 3 [Neisseria meningitidis 053442]
 gi|161594976|gb|ABX72636.1| Penicillin-binding protein 3 [Neisseria meningitidis 053442]
          Length = 515

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 79  AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 116


>gi|121634287|ref|YP_974532.1| putative peptidase [Neisseria meningitidis FAM18]
 gi|120865993|emb|CAM09730.1| putative peptidase [Neisseria meningitidis FAM18]
 gi|325131446|gb|EGC54153.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          M6190]
 gi|325137590|gb|EGC60170.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          ES14902]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|15677636|ref|NP_274795.1| penicillin-binding protein 3 [Neisseria meningitidis MC58]
 gi|7227051|gb|AAF42135.1| penicillin-binding protein 3 [Neisseria meningitidis MC58]
 gi|325139620|gb|EGC62159.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          CU385]
 gi|325200860|gb|ADY96315.1| serine-type D-Ala-D-Ala carboxypeptidase [Neisseria meningitidis
          H44/76]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|218767619|ref|YP_002342131.1| putative peptidase [Neisseria meningitidis Z2491]
 gi|121051627|emb|CAM07927.1| putative peptidase [Neisseria meningitidis Z2491]
          Length = 469

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFK 70


>gi|47570886|gb|AAT35601.1| CTX-M type extended-spectrum beta-lactamase [Escherichia coli]
          Length = 291

 Score = 43.8 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 70/265 (26%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +     +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCCTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGKTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N  A     D+  LI V 
Sbjct: 240 SGDYGTTNDTAVIWPKDRAPLILVT 264


>gi|270047566|pdb|2WKE|A Chain A, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
          Inhibited By 6-Beta-Iodopenicillanate.
 gi|270047567|pdb|2WKE|B Chain B, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
          Inhibited By 6-Beta-Iodopenicillanate.
 gi|270047568|pdb|2WKE|C Chain C, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
          Inhibited By 6-Beta-Iodopenicillanate.
 gi|270047569|pdb|2WKE|D Chain D, Crystal Structure Of The Actinomadura R39 Dd-Peptidase
          Inhibited By 6-Beta-Iodopenicillanate.
 gi|301015723|pdb|2XDM|A Chain A, Crystal Structure Of A Complex Between Actinomadura R39
          Dd Peptidase And A Peptidoglycan Mimetic Boronate
          Inhibitor
 gi|301015724|pdb|2XDM|B Chain B, Crystal Structure Of A Complex Between Actinomadura R39
          Dd Peptidase And A Peptidoglycan Mimetic Boronate
          Inhibitor
 gi|301015725|pdb|2XDM|C Chain C, Crystal Structure Of A Complex Between Actinomadura R39
          Dd Peptidase And A Peptidoglycan Mimetic Boronate
          Inhibitor
 gi|301015726|pdb|2XDM|D Chain D, Crystal Structure Of A Complex Between Actinomadura R39
          Dd Peptidase And A Peptidoglycan Mimetic Boronate
          Inhibitor
 gi|320089689|pdb|2XK1|A Chain A, Crystal Structure Of A Complex Between Actinomadura R39
          Dd- Peptidase And A Boronate Inhibitor
 gi|320089690|pdb|2XK1|B Chain B, Crystal Structure Of A Complex Between Actinomadura R39
          Dd- Peptidase And A Boronate Inhibitor
 gi|320089691|pdb|2XK1|C Chain C, Crystal Structure Of A Complex Between Actinomadura R39
          Dd- Peptidase And A Boronate Inhibitor
 gi|320089692|pdb|2XK1|D Chain D, Crystal Structure Of A Complex Between Actinomadura R39
          Dd- Peptidase And A Boronate Inhibitor
          Length = 466

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 16/46 (34%)

Query: 22 IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           A    +    ++DT TG  +          PAS  KL TA     
Sbjct: 16 PALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALE 61


>gi|255281771|ref|ZP_05346326.1| peptidoglycan glycosyltransferase [Bryantella formatexigens DSM
           14469]
 gi|255267838|gb|EET61043.1| peptidoglycan glycosyltransferase [Bryantella formatexigens DSM
           14469]
          Length = 524

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/279 (11%), Positives = 68/279 (24%), Gaps = 38/279 (13%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA--------------------ENYP 47
           + + + + +    S A         +++ +TG V+A                        
Sbjct: 178 LILTLDTRLQQAASTALGAYRGAVVVMEPDTGAVLAMVSHPDFDPNAMEEQWEYLIAEDA 237

Query: 48  DHPW---------NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
             P           P S  K++TA       +            +     Y   N    +
Sbjct: 238 HSPLLNRATQGLYPPGSTFKILTALEYIQEHEAG----NDYENYTFQCDGYITQNDVTIQ 293

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                +     L      +         L     KF         N  L      ++   
Sbjct: 294 CYDGEVHGYENLQQSFQHSCNTSFANIGLQLDLDKFGDLCEKFLFNGDLPTLMPYSSSQF 353

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
               +  ++    + +   + D      +  +    I         + V      +G++ 
Sbjct: 354 --VLNSNSSYGDIMTTSIGQGDTLVSPFHMALIVSTIANDGVMMYPYFVQRVENTEGVEV 411

Query: 219 GFTCASGFNIVASAIQGDQ---SLIAVILGALDRNTRNK 254
             T    +  + SA + D     + +V+ G       N 
Sbjct: 412 NETKPIEYKRIISAQEADILKSYMQSVVEGGTGSYLWND 450


>gi|219920937|emb|CAQ76646.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     D   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVT 263


>gi|71041802|pdb|1W79|A Chain A, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041803|pdb|1W79|B Chain B, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041804|pdb|1W79|C Chain C, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041805|pdb|1W79|D Chain D, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041806|pdb|1W8Q|A Chain A, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041807|pdb|1W8Q|B Chain B, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041808|pdb|1W8Q|C Chain C, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041809|pdb|1W8Q|D Chain D, Crystal Structure Of The
          Dd-Transpeptidase-Carboxypeptidase From Actinomadura
          R39
 gi|71041810|pdb|1W8Y|A Chain A, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase
          From Actinomadura R39.
 gi|71041811|pdb|1W8Y|B Chain B, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase
          From Actinomadura R39.
 gi|71041812|pdb|1W8Y|C Chain C, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase
          From Actinomadura R39.
 gi|71041813|pdb|1W8Y|D Chain D, Crystal Structure Of The Nitrocefin Acyl-Dd-Peptidase
          From Actinomadura R39.
 gi|215261075|pdb|2VGJ|A Chain A, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261076|pdb|2VGJ|B Chain B, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261077|pdb|2VGJ|C Chain C, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261078|pdb|2VGJ|D Chain D, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261079|pdb|2VGK|A Chain A, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261080|pdb|2VGK|B Chain B, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261081|pdb|2VGK|C Chain C, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|215261082|pdb|2VGK|D Chain D, Crystal Structure Of Actinomadura R39 Dd-Peptidase
          Complexed With A Peptidoglycan-Mimetic Cephalosporin
 gi|320089693|pdb|2XLN|A Chain A, Crystal Structure Of A Complex Between Actinomadura R39
          Dd-Peptidase And A Boronate Inhibitor
 gi|320089694|pdb|2XLN|B Chain B, Crystal Structure Of A Complex Between Actinomadura R39
          Dd-Peptidase And A Boronate Inhibitor
 gi|320089695|pdb|2XLN|C Chain C, Crystal Structure Of A Complex Between Actinomadura R39
          Dd-Peptidase And A Boronate Inhibitor
 gi|320089696|pdb|2XLN|D Chain D, Crystal Structure Of A Complex Between Actinomadura R39
          Dd-Peptidase And A Boronate Inhibitor
          Length = 489

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 16/46 (34%)

Query: 22 IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           A    +    ++DT TG  +          PAS  KL TA     
Sbjct: 16 PALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALE 61


>gi|729292|sp|P39045|DAC_ACTSP RecName: Full=D-alanyl-D-alanine carboxypeptidase;
           Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
           Full=Penicillin-binding protein; Short=PBP; Flags:
           Precursor
 gi|38767|emb|CAA46023.1| D-alanyl-D-alanine carboxypeptidase [Actinomadura sp.]
          Length = 538

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 16/46 (34%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            A    +    ++DT TG  +          PAS  KL TA     
Sbjct: 65  PALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALE 110


>gi|296863468|pdb|3HUO|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
           Complex Benzylpenicillin
 gi|296863469|pdb|3HUO|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
           Complex Benzylpenicillin
 gi|296863470|pdb|3HVF|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
           Complex Hydrolyzed Benzylpenicillin
 gi|296863471|pdb|3HVF|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 S70g In
           Complex Hydrolyzed Benzylpenicillin
 gi|297342912|pdb|3HLW|A Chain A, Ctx-M-9 S70g In Complex With Cefotaxime
 gi|297342913|pdb|3HLW|B Chain B, Ctx-M-9 S70g In Complex With Cefotaxime
 gi|298508309|pdb|3HRE|A Chain A, X-Ray Crystallographic Structure Of Ctx-M-9 S70g
 gi|298508310|pdb|3HRE|B Chain B, X-Ray Crystallographic Structure Of Ctx-M-9 S70g
          Length = 263

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 64/242 (26%), Gaps = 12/242 (4%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   V+     D  +     +K+M A  V    + +K +L  P+ I         
Sbjct: 24  LIDTADNTQVLY--RGDERFPMCGTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYN 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSA 149
             +      TMTL       +  S N     +            F + + + +  L  + 
Sbjct: 82  PIAEKHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTE 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A         T       L               Q+            +  A   
Sbjct: 142 PTLNTAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLP 201

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSM 262
                G KTG       N +A      +  L+ V         A  R      +A +++ 
Sbjct: 202 TSWTAGDKTGSGDYGTTNDIAVIWPQGRAPLVLVTYFTQPQQNAESRRDVLASAARIIAE 261

Query: 263 GF 264
           G 
Sbjct: 262 GL 263


>gi|160899976|ref|YP_001565558.1| beta-lactamase [Delftia acidovorans SPH-1]
 gi|160365560|gb|ABX37173.1| Beta-lactamase [Delftia acidovorans SPH-1]
          Length = 266

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/215 (7%), Positives = 47/215 (21%), Gaps = 6/215 (2%)

Query: 32  TLLDTNTGHVIAENYPD--HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            + D +TG  +  + P       PAS  K+  + + +     +           +     
Sbjct: 28  IVADADTGQSLVHSGPACAERVTPASTFKIAISLMGYDAGILQDESRPAWPYQPEYPDWG 87

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             +            D+        +           +   +            + G + 
Sbjct: 88  GDAWRREITPQAWMKDSVFWYSQQVARELGQQRFGAYVRAFQYGNEDVSAVAVAHPGHNG 147

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
              +++  +         R +      + +             + + G            
Sbjct: 148 AWVVSSLRISAAEQVAFMRKIVRRELSVSSQAIDMTARITRYPVPVDGWTVHGKTGTGSP 207

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                   +     +    V  A +  + L+   L
Sbjct: 208 GSDNRYDAS----RAYGWYVGWATKDQRRLVFATL 238


>gi|1705481|sp|P52682|BLAN_SERMA RecName: Full=Carbapenem-hydrolyzing beta-lactamase Sme-1; Flags:
           Precursor
 gi|472864|emb|CAA82281.1| Sme-1 carbapenem hydrolysing beta-lactamase [Serratia marcescens]
          Length = 294

 Score = 43.8 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 67/260 (25%), Gaps = 19/260 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYPD 48
           +    + ++ +  + F   +                         +DT +G+       D
Sbjct: 8   KTASFLFSVCLALSAFNAHANKSDAAAKQIKKLEEDFDGRIGVFAIDTGSGNT-FGYRSD 66

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K   A  V   +++KK  +   +       EY    +T  KGS MTL +  
Sbjct: 67  ERFPLCSSFKGFLAAAVLERVQQKKLDINQKVKYESRDLEYHSPITTKYKGSGMTLGDMA 126

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN---LGLSATHFMNAHGVVQHGHYT 165
              +  S N     I E      +   + M +   N   L         A    +    T
Sbjct: 127 SAALQYSDNGATNIIMERFLGGPEGMTKFMRSIGDNEFRLDRWELELNTAIPGDKRDTST 186

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCA 223
                  L+     +          +              A        G KTG      
Sbjct: 187 PKAVANSLNKLALGNVLNAKVKAIYQNWLKGNTTGDARIRASVPADWVVGDKTGSCGAIG 246

Query: 224 SGFNIVASAIQGDQSLIAVI 243
           +  +      +    LI  I
Sbjct: 247 TANDYAVIWPKNRAPLIVSI 266


>gi|149915753|ref|ZP_01904278.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. AzwK-3b]
 gi|149810335|gb|EDM70180.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. AzwK-3b]
          Length = 497

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            Y+++D  +G ++          PAS+TK +TA     
Sbjct: 63  TYSVMDVKSGLILEGRGGHEGQPPASVTKAITAIYALR 100


>gi|282897431|ref|ZP_06305433.1| Penicillin-binding protein, transpeptidase [Raphidiopsis brookii
           D9]
 gi|281198083|gb|EFA72977.1| Penicillin-binding protein, transpeptidase [Raphidiopsis brookii
           D9]
          Length = 523

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 78/227 (34%), Gaps = 9/227 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           LS A  N +P   ++D ++G    +   ++ +  AS  K+         +   K  L   
Sbjct: 207 LSAANPNLIPGVFIVDIDSGA-YVDVSGNNNFPAASTIKIPVLVAFLEDVDRGKIRLDEI 265

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +T+ +        N       + +        ++  S N     +   L        + +
Sbjct: 266 LTMEQEMVAGGSGNLRTMPVGTKLKSIEVATKMMTISDNTATNMLISKL-----GGKELL 320

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N+  ++ GL  T   +    ++  + T+ +++A L  ++       M    +  L+I  +
Sbjct: 321 NSRFRSWGLVNTAIQSPLPDLEGTNTTSPKELASLIAKVNQGELISMRSRDL-MLDIMRR 379

Query: 199 KYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
              +     G   GA    KTG       +     +   +  IA I+
Sbjct: 380 TQRDDLLPAGLGEGATAYHKTGDIGTMLADAGLIDVPTGKRYIASIM 426


>gi|46403069|gb|AAS92558.1| carbapenem-hydrolyzing beta-lactamase SME-3 [Serratia marcescens]
          Length = 294

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 67/260 (25%), Gaps = 19/260 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYPD 48
           +    + ++ +  + F   +                         +DT +G+       D
Sbjct: 8   KTASFLFSVCLALSAFNAHANKSDAAAKQIKKLEEDFDGRIGVFAIDTGSGNT-FGYRSD 66

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K   A  V   +++KK  +   +       EY    +T  KGS MTL +  
Sbjct: 67  ERFPLCSSFKGFLAAAVLERVQQKKLDINQKVKYESRDLEYYSPITTKYKGSGMTLGDMA 126

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN---LGLSATHFMNAHGVVQHGHYT 165
              +  S N     I E      +   + M +   N   L         A    +    T
Sbjct: 127 SAALQYSDNGATNIIMERFLGGPEGMTKFMRSIGDNEFRLDRWELELNTAIPGDKRDTST 186

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF--TCA 223
                  L+     +          +              A        G KTG      
Sbjct: 187 PKAVANSLNKLALGNVLNAKVKAIYQNWLKGNTTGDARIRASVPADWVVGDKTGSCGAYG 246

Query: 224 SGFNIVASAIQGDQSLIAVI 243
           +  +      +    LI  I
Sbjct: 247 TANDYAVIWPKNRAPLIVSI 266


>gi|49185337|ref|YP_028589.1| beta-lactamase [Bacillus anthracis str. Sterne]
 gi|49179264|gb|AAT54640.1| beta-lactamase [Bacillus anthracis str. Sterne]
          Length = 301

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 64  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 120

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 121 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 180

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 181 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTN 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 241 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 285


>gi|294777500|ref|ZP_06742951.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides vulgatus PC510]
 gi|294448568|gb|EFG17117.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides vulgatus PC510]
          Length = 466

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL-----------PYYTLLDTNTGHVIAENYPDH 49
          M++ L    + +  +      +++                   + D  TG  +     D 
Sbjct: 1  MKRVLFFFLLILSIHFINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTTGKSVYRYQDDK 60

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS+ K++T+    
Sbjct: 61 LYRPASVEKIITSVTAL 77


>gi|134133905|gb|ABO61010.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 299

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 55/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I+         
Sbjct: 57  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 116

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 117 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEP 176

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 177 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRRQFADWLIDNQTGDACLRAGLGK 236

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 237 RWRVGDKTGSNGDDTRNDIAVLW 259


>gi|229156083|ref|ZP_04284182.1| Beta-lactamase [Bacillus cereus ATCC 4342]
 gi|228627404|gb|EEK84132.1| Beta-lactamase [Bacillus cereus ATCC 4342]
          Length = 332

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+          L   I  +K         
Sbjct: 95  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSID--TLNEVIKFTKEDLVDYSPV 151

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 152 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 211

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 212 LNEAIPGDIRDTSTAKAIATNLKDLTVGNALPHQKRNILTDWMKGNATGDKLIRAGVPTD 271

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N VA     ++  +I  IL + D       
Sbjct: 272 WVVADKSGAGSYGTRNDVAIVWPPNRSPIIIAILSSKDEKEATYD 316


>gi|219920991|emb|CAQ76673.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|126149283|dbj|BAF47414.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 295

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 55/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K M    V S     +  L T + I+         
Sbjct: 53  VLNTGNGRRIGGHRQDERFPMCSTFKSMLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 112

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 113 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEP 172

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 173 DVNLFAKGDPRDTTSPAAMATSLARFAVGNGLQPASRRQFADWLIDNQTGDACLRAGLGK 232

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 233 RWRVGDKTGSNGDDTRNDIAVLW 255


>gi|33326707|gb|AAQ08771.1| putative penicillin binding protein Pbp [Bacillus subtilis]
          Length = 181

 Score = 43.8 bits (101), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            TG V+  +  D    PASL KL+TA    
Sbjct: 12 AKTGEVLFGSREDMRLRPASLMKLLTASAAL 42


>gi|260914802|gb|ACX54259.1| beta-lactamase CTX-M-14 [Escherichia coli]
          Length = 241

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 57/231 (24%), Gaps = 17/231 (7%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N     +            F + + + +  L  +      A         T   
Sbjct: 129 ALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLNTAIPGDPRDTTTPRA 188

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
               L               Q+            +  A        G KTG
Sbjct: 189 MAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWTVGDKTG 239


>gi|229070009|ref|ZP_04203285.1| Beta-lactamase [Bacillus cereus F65185]
 gi|228713110|gb|EEL65009.1| Beta-lactamase [Bacillus cereus F65185]
          Length = 312

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGIRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|229150730|ref|ZP_04278944.1| Beta-lactamase [Bacillus cereus m1550]
 gi|228632817|gb|EEK89432.1| Beta-lactamase [Bacillus cereus m1550]
          Length = 312

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPVEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|219920917|emb|CAQ76636.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|219920895|emb|CAQ76625.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920901|emb|CAQ76628.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920985|emb|CAQ76670.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920987|emb|CAQ76671.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     D   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVT 263


>gi|294813248|ref|ZP_06771891.1| Putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326441642|ref|ZP_08216376.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces clavuligerus ATCC 27064]
 gi|294325847|gb|EFG07490.1| Putative D-alanyl-D-alanine carboxypeptidase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 470

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              +++DT TG  +       P  PAS  K+ T       
Sbjct: 110 RSASVVDTATGRQLYGTDAARPMTPASTIKIATTVAALHA 149


>gi|254388636|ref|ZP_05003869.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197702356|gb|EDY48168.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 455

 Score = 43.8 bits (101), Expect = 0.037,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 15/40 (37%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              +++DT TG  +       P  PAS  K+ T       
Sbjct: 95  RSASVVDTATGRQLYGTDAARPMTPASTIKIATTVAALHA 134


>gi|268317767|ref|YP_003291486.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Rhodothermus marinus DSM 4252]
 gi|262335301|gb|ACY49098.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Rhodothermus marinus DSM 4252]
          Length = 477

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + D  +G V+     +    PAS  KL+T      
Sbjct: 47 YVADVESGRVLVAQNAEQGLLPASTHKLLTTAAALD 82


>gi|56807794|ref|ZP_00365645.1| COG1686: D-alanyl-D-alanine carboxypeptidase [Streptococcus
           pyogenes M49 591]
          Length = 267

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 83/216 (38%), Gaps = 32/216 (14%)

Query: 108 LKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH----- 161
           + +  V S+N   V IA          F+  +N T+K LG++ THF NA G         
Sbjct: 1   MTMTAVPSSNAATVMIANYLSNNDASAFIDRINATAKQLGMTNTHFSNASGAAAQAFQGY 60

Query: 162 ----------GHYTTARDMAILSWRIKTDFPQ-----YMHYFQIKGLEIKGKKYPNTNW- 205
                      + TTARD++ L +     +P+                   +++   N  
Sbjct: 61  YNPTKYDLSASNITTARDLSKLLYAFLKKYPEIISFTNKSVVHTMVGTPYEEEFHTYNHS 120

Query: 206 ---AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT------RNKVS 256
                    G DG+KTG + ++ FN + +A +G   LI +++G  D +       R+   
Sbjct: 121 LPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIVMGVGDWSDQNGEFYRHPFV 180

Query: 257 ASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
            +L   GF  +KT  KK    ++    Q      P 
Sbjct: 181 NALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 216


>gi|303233335|ref|ZP_07320005.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae
           PB189-T1-4]
 gi|302480580|gb|EFL43670.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae
           PB189-T1-4]
          Length = 315

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 70/252 (27%), Gaps = 26/252 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               +++ D +    +           ASL+KL       S        L      +   
Sbjct: 61  DALAFSVYDMDANAYLFYEGAGQEPTVASLSKLFAIDYALSK-----VKLDDVFEANDET 115

Query: 87  SE--YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            +     S+       T T     + ++V S ND A  +A ++ K +            +
Sbjct: 116 LKLVPAGSSMANLTRGTYTAKQIFQAMLVPSGNDAAYVMAYNIGKMDLGAGHSAKEYINH 175

Query: 145 L-------------GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIK 191
                         G +  +  + + +    +      + +                   
Sbjct: 176 FVKSLRTYLARESYGKTDLYDPSGYSMQATTNLDDINRVTLKLLNYDFVKECMGESSFTI 235

Query: 192 GLEIKGKKYPNTNWAVG-----TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
             +     + NTN  +            G+KTG T AS +NI+A      +  +   L A
Sbjct: 236 TTKQGNFTWKNTNEFLDKESLFYNSHIKGVKTG-TMASSYNIIALYENNGKRYLITCLAA 294

Query: 247 LDRNTRNKVSAS 258
                R +   +
Sbjct: 295 HSNKDRYQAVQA 306


>gi|224537216|ref|ZP_03677755.1| hypothetical protein BACCELL_02093 [Bacteroides cellulosilyticus
          DSM 14838]
 gi|224521172|gb|EEF90277.1| hypothetical protein BACCELL_02093 [Bacteroides cellulosilyticus
          DSM 14838]
          Length = 475

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 14/38 (36%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
          + D  TG  +     D    PAS  KL+T     +   
Sbjct: 53 VYDLTTGKSLYTYQSDKLSRPASTMKLLTTITALAHPD 90


>gi|198274423|ref|ZP_03206955.1| hypothetical protein BACPLE_00571 [Bacteroides plebeius DSM
          17135]
 gi|198272625|gb|EDY96894.1| hypothetical protein BACPLE_00571 [Bacteroides plebeius DSM
          17135]
          Length = 471

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 24/81 (29%), Gaps = 14/81 (17%)

Query: 1  MRQFLVIIAMAMLSNIFP-------------FLSIAETNKLPYYTLL-DTNTGHVIAENY 46
          M++   ++    L   F                +           ++ D   G  +    
Sbjct: 1  MKRISGVLFFLFLWAGFLHAQTLLTDELNKLISTDPLLKTSEVGIVVHDLTAGKELYSYQ 60

Query: 47 PDHPWNPASLTKLMTAYVVFS 67
           D  + PAS+ K++TA     
Sbjct: 61 ADKLYRPASIEKVITAVTALD 81


>gi|326333089|ref|ZP_08199338.1| LigA [Nocardioidaceae bacterium Broad-1]
 gi|325949072|gb|EGD41163.1| LigA [Nocardioidaceae bacterium Broad-1]
          Length = 256

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 64/234 (27%), Gaps = 17/234 (7%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-------------P 90
               +     ASL K+  A   +         L  PI +  +                  
Sbjct: 19  AQNVNQQHYAASLMKVPVAIAAYRLRDRGLVSLDEPIAVHPDFDSAVTGSRFEMSREEDQ 78

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
              +    GS + L + ++  +  S N     + E +   E   V      +    ++  
Sbjct: 79  DPVTWEAVGSQLPLGDLVRRSLTVSGNLAVNLVLERVGLEEVAAVLADAGVTPMTTIARG 138

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                       +  TA DM  L  ++ +               +  ++Y +        
Sbjct: 139 IEDAPAREAGLQNLVTANDMGKLLTKLASGRLLSPESTAEIEGILVAQEYRDAIPLGVPE 198

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL--GALDRNT--RNKVSASLL 260
               G KTG+      ++        +  + V+L  G  D  +  R    A  L
Sbjct: 199 DAVVGNKTGWVDGVRHDMAIIRPAQGEPQVMVVLTTGLDDDESEFRISEVARYL 252


>gi|297179875|gb|ADI23934.1| oxacillinase OXA-114c [Achromobacter xylosoxidans]
          Length = 275

 Score = 43.8 bits (101), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/255 (9%), Positives = 57/255 (22%), Gaps = 11/255 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + PAS  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQSTQQACAERYTPASTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAKA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    K+ G      +++  +         R    L  R 
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGKHNGTDGAWIISSLRISPLEQLAFLR---KLVNRQ 178

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                             +   +           G++G+ T          V  A +  +
Sbjct: 179 LPVKAAAYELADNLFEVGQADGWRLYGKTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLIAVILGALDRNTR 252
            L+   L   +R TR
Sbjct: 237 QLVYARLLQDERATR 251


>gi|6580703|emb|CAB63490.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
 gi|22549339|emb|CAD44949.1| beta-lactamase L2 precursor [Stenotrophomonas maltophilia]
 gi|160548115|gb|ABX44761.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + + +        
Sbjct: 62  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 121 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 181 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 240

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 241 RWRVGDKTGSNGEDARNDIAVLW 263


>gi|325918694|ref|ZP_08180792.1| beta-lactamase class A [Xanthomonas vesicatoria ATCC 35937]
 gi|325535086|gb|EGD06984.1| beta-lactamase class A [Xanthomonas vesicatoria ATCC 35937]
          Length = 297

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 77/278 (27%), Gaps = 25/278 (8%)

Query: 2   RQFLVIIAMAMLSNIF-PFLSIAETNKLP-----YYT-------------LLDTNTGHVI 42
           R+FL      ML     P  +++            +              LLD+ TG  +
Sbjct: 5   REFLYATGAGMLFAASRPARALSPAVNADDLLRAQWAEIERGTGGRLGISLLDSATGWRL 64

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
            +   +  +   S  K + A  V   +   K  L  P+ I  +        +    G  +
Sbjct: 65  GQR-ENERFPMCSTFKFVLAAAVLQQVDRGKLSLAQPVKIRASDMLEHAPVTKGHVGGAL 123

Query: 103 TLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
           ++ +  +  ++ S N  A  +            F++ + +                    
Sbjct: 124 SVGDLCRATMIYSDNPAANLLFPLVGGPPGVTAFLRSIGDAKTRSDRYEPEMNGFAPGEP 183

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T A   + L   +  D  Q     Q+    I  +   +   A  T     G KTG 
Sbjct: 184 RDTTTPAAMASTLHTLLLGDALQPASRTQLTDWMIDNRTGDDCLRAGFTRDWKIGDKTGS 243

Query: 221 TCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
                 N +A           L+   L     +   + 
Sbjct: 244 NGTDTRNDIAILWPPKGRPPLLLTTYLNGAKVDDAARD 281


>gi|219920955|emb|CAQ76655.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|219920951|emb|CAQ76653.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920975|emb|CAQ76665.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|166225923|sp|Q5YXD6|BLAC_NOCFA RecName: Full=Beta-lactamase FAR-1; Flags: Precursor
          Length = 313

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 59/213 (27%), Gaps = 3/213 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G V+A    D  +  AS  K +    +              +  S+         
Sbjct: 74  VDTTSGAVVAYR-ADERFGMASTFKGLACGALLREHPLSSGYFDQVVRYSREEVVSYSPV 132

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +  +  + MT+       I  S N     I +          F++ + +    L    T 
Sbjct: 133 TETRVDTGMTVAELCHATITVSDNTAGNQILKLLGGPAGFTAFLRSLGDEVSRLDRWETE 192

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                   +    T A   A     +  D        Q++   +          A     
Sbjct: 193 LNEVPPGEERDTTTPAAVAANYRALVLGDVLAEPERAQLRDWLVANTTGDQRIRAGVPAG 252

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              G KTG     G N VA A       I + L
Sbjct: 253 WTVGDKTGGGSHGGNNDVAVAWTETGDPIVIAL 285


>gi|190575578|ref|YP_001973423.1| putative beta-lactamase [Stenotrophomonas maltophilia K279a]
 gi|10242340|gb|AAG15385.1|AF299368_1 L2 beta-lactamase [Stenotrophomonas maltophilia]
 gi|190013500|emb|CAQ47135.1| putative beta-lactamase [Stenotrophomonas maltophilia K279a]
 gi|221229307|gb|ABO61008.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
 gi|221229310|gb|ABO61009.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + + +        
Sbjct: 62  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 121 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 181 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 240

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 241 RWRVGDKTGSNGEDARNDIAVLW 263


>gi|54024277|ref|YP_118519.1| putative class A beta-lactamase [Nocardia farcinica IFM 10152]
 gi|54015785|dbj|BAD57155.1| putative class A beta-lactamase [Nocardia farcinica IFM 10152]
          Length = 297

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 59/213 (27%), Gaps = 3/213 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G V+A    D  +  AS  K +    +              +  S+         
Sbjct: 58  VDTTSGAVVAYR-ADERFGMASTFKGLACGALLREHPLSSGYFDQVVRYSREEVVSYSPV 116

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +  +  + MT+       I  S N     I +          F++ + +    L    T 
Sbjct: 117 TETRVDTGMTVAELCHATITVSDNTAGNQILKLLGGPAGFTAFLRSLGDEVSRLDRWETE 176

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                   +    T A   A     +  D        Q++   +          A     
Sbjct: 177 LNEVPPGEERDTTTPAAVAANYRALVLGDVLAEPERAQLRDWLVANTTGDQRIRAGVPAG 236

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              G KTG     G N VA A       I + L
Sbjct: 237 WTVGDKTGGGSHGGNNDVAVAWTETGDPIVIAL 269


>gi|219920899|emb|CAQ76627.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920931|emb|CAQ76643.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920947|emb|CAQ76651.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920949|emb|CAQ76652.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|229079705|ref|ZP_04212238.1| Beta-lactamase [Bacillus cereus Rock4-2]
 gi|228703545|gb|EEL55998.1| Beta-lactamase [Bacillus cereus Rock4-2]
          Length = 312

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGIRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|126727932|ref|ZP_01743758.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodobacterales bacterium HTCC2150]
 gi|126702792|gb|EBA01899.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodobacterales bacterium HTCC2150]
          Length = 499

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 17/44 (38%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
              + D  TG V+    P     PAS+ K +TA   +  L    
Sbjct: 65  SCVVADARTGKVLEVLNPVLQLPPASVAKAITALYAWENLGPGH 108


>gi|38492524|pdb|1N4O|A Chain A, Crystal Structure Of The Class A Beta-Lactamase L2 From
           Stenotrophomonas Maltophilia
 gi|38492525|pdb|1N4O|B Chain B, Crystal Structure Of The Class A Beta-Lactamase L2 From
           Stenotrophomonas Maltophilia
 gi|46015008|pdb|1O7E|A Chain A, Crystal Structure Of The Class A Beta-Lactamse L2 From
           Stenotrophomonas Maltophilia At 1.51 Angstrom
 gi|46015009|pdb|1O7E|B Chain B, Crystal Structure Of The Class A Beta-Lactamse L2 From
           Stenotrophomonas Maltophilia At 1.51 Angstrom
          Length = 276

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + + +        
Sbjct: 35  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVGEADLLSHAP 93

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 94  VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 153

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 154 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 213

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 214 RWRVGDKTGSNGEDARNDIAVLW 236


>gi|18129353|emb|CAD20587.1| beta-lactamase class A [Kluyvera ascorbata]
          Length = 291

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 65/233 (27%), Gaps = 11/233 (4%)

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           ++     D  +   S +K+M A  V    +  K +L   + I K+        +      
Sbjct: 61  ILY--RADERFAKCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAEKHVNG 118

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGV 158
           TMTL       +  S N     +   L   +K   F + + + +  L  +      A   
Sbjct: 119 TMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNTAIPG 178

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
                 T       L               Q+            +  A        G KT
Sbjct: 179 DPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWVVGDKT 238

Query: 219 GFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           G       N +A     +   L+ V         A  R      +A +++ GF
Sbjct: 239 GSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF 291


>gi|228927566|ref|ZP_04090618.1| Beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228832046|gb|EEM77631.1| Beta-lactamase [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
          Length = 312

 Score = 43.8 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 75  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKRATYD 296


>gi|39976195|ref|XP_369488.1| hypothetical protein MGG_05976 [Magnaporthe oryzae 70-15]
 gi|145011750|gb|EDJ96406.1| hypothetical protein MGG_05976 [Magnaporthe oryzae 70-15]
          Length = 405

 Score = 43.8 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 44 ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
              D   + AS TKLMTA +    +++    L     +
Sbjct: 49 AFDMDTVVSIASCTKLMTAVLALQVVQDGLINLDDAEPV 87


>gi|54887464|emb|CAH10074.1| extended-spectrum beta-lactamase [Escherichia coli]
          Length = 264

 Score = 43.8 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 72/227 (31%), Gaps = 17/227 (7%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   +T+++ A      +   K        
Sbjct: 35  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQSVTVNRAAVLQNTWSPMMKDHQGDEFT 94

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----- 160
            A++ L+  S +       + L +      Q ++   ++LG+     +     +      
Sbjct: 95  VAVQQLLQYSVSHSDNVACDLLFELV-GGPQALHAYIQSLGVKEAAVVANEAQMHADDQV 153

Query: 161 -HGHYTTARDMAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
            + ++T+ +  A +  + +             +    +      + K        V    
Sbjct: 154 QYQNWTSMKAAAQVLQKFEQKKQLSETSQALLWKWMVETTTGPQRLKGLLPAGTIVAHKT 213

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-RNKVSA 257
           G  G++ G T A+        +   + L+  +       + R   + 
Sbjct: 214 GTSGVRAGKTAATNDA-GVIMLPDGRPLLVAVFVKDSAESERTNEAI 259


>gi|37951601|gb|AAR05437.1| extended-spectrum beta-lactamase CTX-M32 [Klebsiella pneumoniae]
          Length = 291

 Score = 43.8 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 72/265 (27%), Gaps = 28/265 (10%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K++ A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVIAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVI 243
                  N +A     D+  LI V 
Sbjct: 240 SGDYGTTNDIAVIWPKDRAPLILVT 264


>gi|10946527|gb|AAG23870.1| beta-lactamase PSE-5 [Pseudomonas aeruginosa]
          Length = 288

 Score = 43.8 bits (101), Expect = 0.041,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNSNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|219920957|emb|CAQ76656.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.8 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     D   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVT 263


>gi|172037246|ref|YP_001803747.1| putative D-alanyl-D-alanine carboxypeptidase [Cyanothece sp. ATCC
           51142]
 gi|171698700|gb|ACB51681.1| putative D-alanyl-D-alanine carboxypeptidase [Cyanothece sp. ATCC
           51142]
          Length = 296

 Score = 43.8 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 9/82 (10%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYY-TLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             A+++ +   +         ++  L++  + G V+  +  D  + PAS  K+ T     
Sbjct: 62  CAALITPVIDNIISPYE---KHWGILVEKLDDGTVLYSHNADRHFIPASNNKIFTTAAAL 118

Query: 67  S----FLKEKKAMLTTPITISK 84
                  K     L + + ++ 
Sbjct: 119 QLKTPQSKIGSKSLQSWVNVTN 140


>gi|229161441|ref|ZP_04289422.1| Beta-lactamase [Bacillus cereus R309803]
 gi|228621978|gb|EEK78823.1| Beta-lactamase [Bacillus cereus R309803]
          Length = 312

 Score = 43.8 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      +   L   IT +K         
Sbjct: 75  IDTGTHQTIAYR-PNERFAFASTYKALAAGVLLQQNSIE--KLNEVITYTKGDLVEYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 132 TERHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMEDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPVHKRNILTEWMKGNATGDKLIRAGVPNG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|78213467|ref|YP_382246.1| beta-lactamase family protein [Synechococcus sp. CC9605]
 gi|78197926|gb|ABB35691.1| possible beta-lactamase family protein [Synechococcus sp. CC9605]
          Length = 381

 Score = 43.8 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 6/155 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     +   Y L+  + G   A    + P   AS  K      V   L +       
Sbjct: 112 LAAQQSNLQASAYMLI-LDDGRF-AAMQAERPMAAASSIKTPILLAVLELLDQGTLQWNE 169

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+T+++            +   +    + +   +++ +++ A  +  +        ++ +
Sbjct: 170 PLTLTEELVGGGAGWMASRPLGSRFPTHEVATEMIRVSDNSATNLMIA----RAGGMEAI 225

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           N   + L L +T   N    +   + T+ARD++  
Sbjct: 226 NARFQELDLPSTMVNNWLPDLDGTNTTSARDLSRA 260


>gi|289706995|ref|ZP_06503330.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micrococcus luteus SK58]
 gi|289556320|gb|EFD49676.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micrococcus luteus SK58]
          Length = 477

 Score = 43.4 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTA 62
           D  TG V+     D P  PAS  K++ A
Sbjct: 95  DLATGEVLYARDADEPVAPASSLKVLAA 122


>gi|290958779|ref|YP_003489961.1| carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260648305|emb|CBG71416.1| putative carboxypeptidase [Streptomyces scabiei 87.22]
          Length = 444

 Score = 43.4 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            ++D  +  V+  +  D     AS TKL TA    
Sbjct: 88  VVIDAKSDKVVWGHNADTALMAASNTKLATATAAL 122


>gi|239916680|ref|YP_002956238.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Micrococcus luteus NCTC 2665]
 gi|281414862|ref|ZP_06246604.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           protein [Micrococcus luteus NCTC 2665]
 gi|239837887|gb|ACS29684.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Micrococcus luteus NCTC 2665]
          Length = 477

 Score = 43.4 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTA 62
           D  TG V+     D P  PAS  K++ A
Sbjct: 95  DLATGEVLYARDADEPVAPASSLKVLAA 122


>gi|13959309|sp|O07293|BLO18_PSEAE RecName: Full=Beta-lactamase OXA-18; AltName: Full=Penicillinase;
           Flags: Precursor
 gi|2149411|gb|AAB58555.1| class D beta-lactamase [Pseudomonas aeruginosa]
 gi|209981016|gb|ACJ05191.1| OXA-18 [Pseudomonas aeruginosa]
          Length = 275

 Score = 43.4 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 74/240 (30%), Gaps = 10/240 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP-DHPWNPASLTKLM 60
           R F+  ++  + +    F       KL    ++D  +G ++      D  + P S  KL 
Sbjct: 11  RHFIFAVSFVISTVCLTFSPANAAQKLSCTLVIDEASGDLLHREGSCDKAFAPMSTFKLP 70

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
            A + +          TTP    K       S       +    D+ +      +     
Sbjct: 71  LAIMGYDAD--ILLDATTPRWDYKPEFNGYKSQQKPTDPTIWLKDSIVWYSQELTRRLGE 128

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
              ++ + + +        +  K+ GL+         +      +    +  L   ++ +
Sbjct: 129 SRFSDYVQRFDYGNKDVSGDPGKHNGLTHA------WLASSLKISPEEQVRFLRRFLRGE 182

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
            P      ++    +   +  + +    T  G+     G     G+  +  A + D+ ++
Sbjct: 183 LPVSEDALEMTKAVVPHFEAGDWDVQGKTGTGSLSDAKGGKAPIGW-FIGWATRDDRRVV 241


>gi|296503066|ref|YP_003664766.1| beta-lactamase [Bacillus thuringiensis BMB171]
 gi|296324118|gb|ADH07046.1| Beta-lactamase [Bacillus thuringiensis BMB171]
          Length = 308

 Score = 43.4 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 71  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 127

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +   +   K  +K ++HM +         T 
Sbjct: 128 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNEIGGPKGYEKALRHMGDRITMSDRFETE 187

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 188 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 247

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 248 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 292


>gi|302552014|ref|ZP_07304356.1| penicillin-binding protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302469632|gb|EFL32725.1| penicillin-binding protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 557

 Score = 43.4 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 51/221 (23%), Gaps = 26/221 (11%)

Query: 18  PFLSIAETNKLP----YYTLLDTNTGHVIAENYP--------DHPWNPASLTKLMTAYVV 65
              + AE            L+  +TG ++A                 P S  K++T+ ++
Sbjct: 265 ALQAAAEKQVAKKAKSSVVLMRVSTGEILAAANASPGFNTAFQGSLAPGSTMKVITSSLL 324

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                   A         K                    D   K    +S N        
Sbjct: 325 LEK---GLASPDKKHPCPKY--FTYGHWKFQNDDKFEIKDGTFKASFARSCNTA---FIS 376

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM 185
              K +   +         LGL+        GV         +  A     +       M
Sbjct: 377 QAPKLKDDDLTKQAQQVFGLGLNNWAV----GVPSFDGAVPVQSAAQKGASLIGQGGVRM 432

Query: 186 HYFQIKGL--EIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +   +  +   IK   +           G    K   T +S
Sbjct: 433 NPLNMASVSATIKSGTFHQPYLVSPDVDGRGLAKASRTMSS 473


>gi|219920993|emb|CAQ76674.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.4 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     D   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVT 263


>gi|219920973|emb|CAQ76664.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.4 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGPAESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 263


>gi|219920989|emb|CAQ76672.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.4 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N  A     +   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDXAVIWPENHAPLVLVT 263


>gi|60416699|emb|CAI43414.1| beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 43.4 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F   + + +  L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFAHSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      D        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGDALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     D   L+ V         A +R      +A +++ G 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVTYFTQPQQDAKNRKEVLAAAAKIVTEGL 290


>gi|333029538|ref|ZP_08457599.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Bacteroides coprosuis DSM 18011]
 gi|332740135|gb|EGJ70617.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Bacteroides coprosuis DSM 18011]
          Length = 459

 Score = 43.4 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
          + + +   +I E+  +    PAS  KL+TA     + 
Sbjct: 41 VYNLSKDQLIYEHNANKLARPASTLKLLTAITALEYH 77


>gi|270311266|gb|ACZ72744.1| beta-lactamase [Burkholderia multivorans]
 gi|270311268|gb|ACZ72745.1| beta-lactamase [Achromobacter denitrificans]
          Length = 304

 Score = 43.4 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFLSI---------AETNKLPYYT---LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F   S          A    L       +LDT  G    +   +  
Sbjct: 18  KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSTRIGVSVLDTQNGE-YWDYNGNQR 76

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 77  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 136

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 137 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 196

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 197 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 256

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 257 TAVVWSEHQAPIIV 270


>gi|82655102|emb|CAJ19620.1| OKP-B beta-lactamase [Klebsiella pneumoniae]
          Length = 286

 Score = 43.4 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 63/258 (24%), Gaps = 21/258 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + +I    L+       + +             Y  +D  +G  +A       +   S 
Sbjct: 8   LISLITALPLAVFASPQPLEQIKISESQLAGRVGYVEMDLASGRTLATWRASERFPLMST 67

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 68  FKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 127

Query: 117 NDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N     +            F++ + +    L    T    A         T A     L 
Sbjct: 128 NSAGNLLLKIVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPASMATTLR 187

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
             + T         Q+    +  +       AV         KTG            A +
Sbjct: 188 KLLTTPSLSARSQQQLLQWMVDDRVAGPLIRAVLPAGWFIADKTG------------AGE 235

Query: 235 GDQSLIAVILGALDRNTR 252
                I  +LG   +  R
Sbjct: 236 RGSRGIVALLGPDGKAER 253


>gi|269103417|ref|ZP_06156114.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae
          subsp. damselae CIP 102761]
 gi|268163315|gb|EEZ41811.1| D-alanyl-D-alanine carboxypeptidase [Photobacterium damselae
          subsp. damselae CIP 102761]
          Length = 464

 Score = 43.4 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 7  IIAMAMLSNIFPFLSIAETNKLPY--------YTLL-DTNTGHVIAENYPDHPWNPASLT 57
          ++ +++L+   P L+                   L+ D  TG +I +   D+   PAS  
Sbjct: 5  LLCVSLLATSLPTLAAFNPQAAIAKLPQGHDLALLIKDPATGKIIYQQRTDNLQAPASTQ 64

Query: 58 KLMTAYVV 65
          K +TA   
Sbjct: 65 KTITALAA 72


>gi|126659412|ref|ZP_01730546.1| D-alanyl-D-alanine carboxypeptidase [Cyanothece sp. CCY0110]
 gi|126619248|gb|EAZ89983.1| D-alanyl-D-alanine carboxypeptidase [Cyanothece sp. CCY0110]
          Length = 295

 Score = 43.4 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 32  TLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS----FLKEKKAMLTTPITISK 84
            L++  + G V+  +  D  + PAS  K+ T            K     L + + ++ 
Sbjct: 83  ILVEKLDDGTVLYSHNADRHFIPASNNKIFTTAAALQLKTPQSKIGSKSLQSWVNVTN 140


>gi|219920935|emb|CAQ76645.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 43.4 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 59/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     I   L   EK   F + + + + +L  +     
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFSLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     D   L+ V 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPEDHAPLVLVT 263


>gi|110678570|ref|YP_681577.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter denitrificans OCh 114]
 gi|109454686|gb|ABG30891.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter denitrificans OCh 114]
          Length = 499

 Score = 43.4 bits (100), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            + + D  TG ++    P+    PAS+TK +TA     
Sbjct: 63  AFAVADAKTGEILEARAPELGIAPASVTKAITALYALD 100


>gi|154686280|ref|YP_001421441.1| hypothetical protein RBAM_018470 [Bacillus amyloliquefaciens
          FZB42]
 gi|42491141|emb|CAE11278.1| DacC protein [Bacillus amyloliquefaciens FZB42]
 gi|154352131|gb|ABS74210.1| DacC [Bacillus amyloliquefaciens FZB42]
          Length = 491

 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            TG V+  +  D    PASL KL+TA    
Sbjct: 62 AKTGEVLFGSREDMRLRPASLMKLLTASAAL 92


>gi|46358558|gb|AAS88588.1| ORN-5 beta-lactamase [Raoultella ornithinolytica]
          Length = 291

 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G +++       +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLSGYRAGERFPMMSTFKVLLCGAVLSRVDTGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  ++   +    F++H  + +  L    T 
Sbjct: 105 TEKHLADGLTVGELCAAAITLSDNTAANLLLTTIGGPQGLTTFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +     
Sbjct: 165 LNEARPGDVRDTTTPEAMARTLRNLLTGRVLSPASQQQLQRWMVEDKVAGPLLRSALPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L A     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTATPASMDERNKQIAAI 276


>gi|221229313|gb|ABO61011.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A    S  +   A+L   + + +        
Sbjct: 62  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATALSQAERMPALLDRRVPVGEADLLSHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 121 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 181 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 240

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 241 RWRVGDKTGSNGEDARNDIAVLW 263


>gi|46358556|gb|AAS88587.1| ORN-4 beta-lactamase [Raoultella ornithinolytica]
          Length = 291

 Score = 43.4 bits (100), Expect = 0.048,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G +++       +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLSGYRAGERFPMMSTFKVLLCGAVLSRVDTGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       + +       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLADGLNVGELCAAAITLSDNTAANLLLTTLGGPQGLTTFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +     
Sbjct: 165 LNEARPGDVRDTTTPEAMARTLRNLLTGRVLSPASQQQLQRWMVEDKVAGPLLRSALPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L A     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTATPASMDERNKQIAAI 276


>gi|228908258|ref|ZP_04072103.1| Beta-lactamase [Bacillus thuringiensis IBL 200]
 gi|228851299|gb|EEM96108.1| Beta-lactamase [Bacillus thuringiensis IBL 200]
          Length = 312

 Score = 43.4 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 57/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRITMSDRFETA 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|74474872|dbj|BAE44424.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
 gi|74474874|dbj|BAE44425.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 289

 Score = 43.4 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A  V S  +   A+L   + +          
Sbjct: 51  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVPVRDADLLSHAP 109

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 110 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 169

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 170 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 229

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 230 RWRVGDKTGSNGEDARNDIAVLW 252


>gi|260435239|ref|ZP_05789209.1| beta-lactamase family protein [Synechococcus sp. WH 8109]
 gi|260413113|gb|EEX06409.1| beta-lactamase family protein [Synechococcus sp. WH 8109]
          Length = 381

 Score = 43.4 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 6/155 (3%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     +   Y L+  + G   A    + P   AS  K      V   L +       
Sbjct: 112 LAAQQSDLQASAYMLI-LDDGRF-AAMQAERPMAAASSIKTPILLAVLELLDQGTLQWNE 169

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+T+++            +   +    + +   +++ +++ A  +  +        +  +
Sbjct: 170 PLTLTEELVGGGAGWMASRPLGSRFPTHEVATEMIRVSDNSATNLMIA----RAGGMDAI 225

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAIL 173
           N   + L L +T   N    +   + T+ARD++  
Sbjct: 226 NARFQELDLPSTVVNNWLPDLDGTNTTSARDLSRA 260


>gi|85709563|ref|ZP_01040628.1| Beta-lactamase class A [Erythrobacter sp. NAP1]
 gi|85688273|gb|EAQ28277.1| Beta-lactamase class A [Erythrobacter sp. NAP1]
          Length = 340

 Score = 43.4 bits (100), Expect = 0.050,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 85/253 (33%), Gaps = 27/253 (10%)

Query: 34  LDTNTGH---VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT--ISKNASE 88
           LD  TG    V+     D  +  AS +K+  A      +++ K  LT+     I   +++
Sbjct: 77  LDLATGESVAVL----GDQLFPMASTSKIAVAATYLEMVEQNKYSLTSEFPLLIPIRSAK 132

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDI--AVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    +  ++G+ M   + ++++I +S+N    A+  A    +    +++    T  ++ 
Sbjct: 133 FSSPAAPVRRGNYMPAIDLIEIMITRSSNPATDALLAAVGGPEKVNDWMRRQGITDFSID 192

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWR-------IKTDFPQYMHYFQIKGLEIKGKK 199
                 +   G     ++   RD A             + DF        + G   +   
Sbjct: 193 RDIATLVRDDGEYDPANWIDPRDAATPRAMVRLLQGLYRGDFLSDQSRQVLLGAMSRTVT 252

Query: 200 YPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV---ILGALDRNTR---- 252
                 A          KTG    +  +I           IAV   + G   R  R    
Sbjct: 253 GRRRIPANMPDEAVVSHKTGSLNNTSSDIGIIESPDG-RAIAVAIYVTGQGTRRNREARI 311

Query: 253 NKVSASLLSMGFY 265
             ++ +L   GF 
Sbjct: 312 ASIARALYD-GFA 323


>gi|165869180|ref|ZP_02213840.1| beta-lactamase [Bacillus anthracis str. A0488]
 gi|167632304|ref|ZP_02390631.1| beta-lactamase [Bacillus anthracis str. A0442]
 gi|167637931|ref|ZP_02396210.1| beta-lactamase [Bacillus anthracis str. A0193]
 gi|170685205|ref|ZP_02876429.1| beta-lactamase [Bacillus anthracis str. A0465]
 gi|170704467|ref|ZP_02894933.1| beta-lactamase [Bacillus anthracis str. A0389]
 gi|177649574|ref|ZP_02932576.1| beta-lactamase [Bacillus anthracis str. A0174]
 gi|190565220|ref|ZP_03018140.1| beta-lactamase Bla1 [Bacillus anthracis Tsiankovskii-I]
 gi|227814685|ref|YP_002814694.1| beta-lactamase Bla1 [Bacillus anthracis str. CDC 684]
 gi|229600021|ref|YP_002866828.1| beta-lactamase Bla1 [Bacillus anthracis str. A0248]
 gi|164715906|gb|EDR21423.1| beta-lactamase [Bacillus anthracis str. A0488]
 gi|167514480|gb|EDR89847.1| beta-lactamase [Bacillus anthracis str. A0193]
 gi|167532602|gb|EDR95238.1| beta-lactamase [Bacillus anthracis str. A0442]
 gi|170130268|gb|EDS99129.1| beta-lactamase [Bacillus anthracis str. A0389]
 gi|170670565|gb|EDT21304.1| beta-lactamase [Bacillus anthracis str. A0465]
 gi|172084648|gb|EDT69706.1| beta-lactamase [Bacillus anthracis str. A0174]
 gi|190563247|gb|EDV17212.1| beta-lactamase Bla1 [Bacillus anthracis Tsiankovskii-I]
 gi|227002673|gb|ACP12416.1| beta-lactamase Bla1 [Bacillus anthracis str. CDC 684]
 gi|229264429|gb|ACQ46066.1| beta-lactamase Bla1 [Bacillus anthracis str. A0248]
          Length = 276

 Score = 43.4 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 39  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 96  TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 155

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 156 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTN 215

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 216 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 260


>gi|76781027|gb|ABA54433.1| beta-lactamase [Salmonella enterica subsp. enterica serovar Albany]
          Length = 288

 Score = 43.4 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 78/254 (30%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A       + I V
Sbjct: 241 TAVVWSEHPAPIIV 254


>gi|111225918|ref|YP_716712.1| putative penicillin-binding protein 6 [Frankia alni ACN14a]
 gi|111153450|emb|CAJ65208.1| conserved hypothetical protein; putative signal peptide; putative
           Penicillin-binding protein 6 [Precursor]
           (D-alanyl-D-alanine carboxypeptidase fraction C (dacC)
           [Frankia alni ACN14a]
          Length = 493

 Score = 43.4 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK--LMTAYVV 65
                P   ++D +TGHV+ ++    P  PAS  K  + TA +V
Sbjct: 75  PVLAGPAAFVVDASTGHVLLDDRARTPAVPASTLKTAVATAALV 118


>gi|86160225|ref|YP_467010.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776736|gb|ABC83573.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 737

 Score = 43.4 bits (100), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15 NIFPFLSIAETNKLPYYTLLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +   +  +         L+   +TG VI    PD   NPAS  KL+T+    
Sbjct: 46 ALAAIVDGSPLAGARVGILVSAVDTGEVIYARDPDVLLNPASNVKLVTSAAAL 98


>gi|145596821|ref|YP_001161118.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Salinispora tropica CNB-440]
 gi|145306158|gb|ABP56740.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Salinispora tropica CNB-440]
          Length = 593

 Score = 43.4 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           + D  +G ++ +        PAS+TKL+TA  V +      
Sbjct: 207 VTDVASGAILYDQGAADGTVPASVTKLVTAATVLAARDPGH 247


>gi|30262502|ref|NP_844879.1| beta-lactamase [Bacillus anthracis str. Ames]
 gi|47778058|ref|YP_019143.2| beta-lactamase [Bacillus anthracis str. 'Ames Ancestor']
 gi|21433610|gb|AAK53749.2|AF367983_1 beta-lactamase I [Bacillus anthracis]
 gi|30257134|gb|AAP26365.1| beta-lactamase Bla1 [Bacillus anthracis str. Ames]
 gi|38427155|gb|AAR20595.1| beta-lactamase I [Bacillus anthracis]
 gi|47551763|gb|AAT31618.2| beta-lactamase [Bacillus anthracis str. 'Ames Ancestor']
          Length = 309

 Score = 43.4 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 72  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 128

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 129 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 188

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 189 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTN 248

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 249 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 293


>gi|49477729|ref|YP_036617.1| beta-lactamase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|49329285|gb|AAT59931.1| beta-lactamase [Bacillus thuringiensis serovar konkukian str.
           97-27]
          Length = 312

 Score = 43.4 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 75  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRKMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTN 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 296


>gi|6137620|pdb|1BUE|A Chain A, Nmc-A Carbapenemase From Enterobacter Cloacae
 gi|157830473|pdb|1BUL|A Chain A, 6alpha-(Hydroxypropyl)penicillanate Acylated On Nmc-A
           Beta- Lactamase From Enterobacter Cloacae
          Length = 265

 Score = 43.4 bits (100), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 57/223 (25%), Gaps = 6/223 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LDT +G        +  +   S  K   A  V    ++ +  L   +  +  + E+    
Sbjct: 24  LDTGSGKS-FSYRANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVNYNTRSLEFHSPI 82

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN---NTSKNLGLSAT 150
           +T  K + M+L +     +  S N     I E      +   + M    +    L     
Sbjct: 83  TTKYKDNGMSLGDMAAAALQYSDNGATNIILERYIGGPEGMTKFMRSIGDEDFRLDRWEL 142

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
               A    +    T A     L      +          +              A    
Sbjct: 143 DLNTAIPGDERDTSTPAAVAKSLKTLALGNILSEHEKETYQTWLKGNTTGAARIRASVPS 202

Query: 211 LGADGMKTGF--TCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               G KTG      +  +      +    LI  +    +   
Sbjct: 203 DWVVGDKTGSCGAYGTANDYAVVWPKNRAPLIISVYTTKNEKE 245


>gi|46277644|gb|AAS87024.1| beta-lactamase ORN-2 [Raoultella ornithinolytica]
          Length = 291

 Score = 43.4 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G +++       +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLSGYRAGERFPMMSTFKVLLCGAVLSRVDTGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLADGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTTFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +     
Sbjct: 165 LNEARPGDVRDTTTPEAMARTLRNLLTGRVLSPASQQQLQRWMVEDKVAGPLLRSALPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L A     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTATPASMDERNKQIAAI 276


>gi|32307193|gb|AAP79050.1| beta-lactamase [Raoultella ornithinolytica]
 gi|32307195|gb|AAP79051.1| beta-lactamase [Raoultella ornithinolytica]
 gi|46358562|gb|AAS88590.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358564|gb|AAS88591.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358566|gb|AAS88592.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358568|gb|AAS88593.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358570|gb|AAS88594.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358572|gb|AAS88595.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358574|gb|AAS88596.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358576|gb|AAS88597.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358578|gb|AAS88598.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358580|gb|AAS88599.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358582|gb|AAS88600.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|46358584|gb|AAS88601.1| ORN-1 beta-lactamase [Raoultella ornithinolytica]
 gi|82408913|gb|ABB73250.1| beta-lactamase ORN-1 [Raoultella ornithinolytica]
          Length = 291

 Score = 43.4 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G +++       +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLSGYRAGERFPMMSTFKVLLCGAVLSRVDTGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLADGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTTFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +     
Sbjct: 165 LNEARPGDVRDTTTPEAMARTLRNLLTGRVLSPASQQQLQRWMVEDKVAGPLLRSALPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L A     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTATPASMDERNKQIAAI 276


>gi|298252659|ref|ZP_06976453.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Gardnerella vaginalis 5-1]
 gi|297533023|gb|EFH71907.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Gardnerella vaginalis 5-1]
          Length = 596

 Score = 43.4 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
             ++D N G V+A + P+    PAS  K +TA V    L   
Sbjct: 162 AVIMDAN-GRVVASHEPNALREPASTLKTLTASVASRTLDMG 202


>gi|297243771|ref|ZP_06927701.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Gardnerella vaginalis AMD]
 gi|296888192|gb|EFH26934.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Gardnerella vaginalis AMD]
          Length = 534

 Score = 43.4 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
             ++D N G V+A + P+    PAS  K +TA V    L   
Sbjct: 100 AVIMDAN-GRVVASHEPNALREPASTLKTLTASVASRTLDMG 140


>gi|283783580|ref|YP_003374334.1| putative D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Gardnerella vaginalis 409-05]
 gi|283441821|gb|ADB14287.1| putative D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Gardnerella vaginalis 409-05]
          Length = 596

 Score = 43.4 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
             ++D N G V+A + P+    PAS  K +TA V    L   
Sbjct: 162 AVIMDAN-GRVVASHEPNALREPASTLKTLTASVASRTLDMG 202


>gi|315446259|ref|YP_004079138.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Mycobacterium sp. Spyr1]
 gi|315264562|gb|ADU01304.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Mycobacterium sp. Spyr1]
          Length = 459

 Score = 43.0 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + D  TG  +     D P  PAS  KL+TA    
Sbjct: 91  ITDALTGKQLWAQGADVPMQPASTNKLLTAAAAL 124


>gi|580754|emb|CAA29819.1| unnamed protein product [Bacillus cereus]
          Length = 306

 Score = 43.0 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 69  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 126 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSNRFETE 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 186 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGIPTD 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 246 WVVGDKSGAGSYGTRNDIAVVWPPNRAPIIIAILSSKDEKEAIYD 290


>gi|145222001|ref|YP_001132679.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mycobacterium gilvum PYR-GCK]
 gi|145214487|gb|ABP43891.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mycobacterium gilvum PYR-GCK]
          Length = 459

 Score = 43.0 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + D  TG  +     D P  PAS  KL+TA    
Sbjct: 91  ITDALTGKQLWAQGADVPMQPASTNKLLTAAAAL 124


>gi|281425418|ref|ZP_06256331.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella oris F0302]
 gi|281400411|gb|EFB31242.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella oris F0302]
          Length = 420

 Score = 43.0 bits (99), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/257 (10%), Positives = 58/257 (22%), Gaps = 24/257 (9%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + D +    I          PAS  KL+TA      L       T      K  +    
Sbjct: 78  MIYDLDADSTIFAFNEHQLMRPASTMKLVTAITAIDRLGGDYQFKTELCYTGKIENNKLV 137

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
            +     G     +       V++   + V   E         ++      +       +
Sbjct: 138 GDIYCVGGFDPRFNTDDLNAFVEAIRKMGVDTIEGH-LYADLSMKDTKQYGEGWCWDDKN 196

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI--------KGLEIKGKKYPNT 203
            +    +        AR +  L               +         +   I        
Sbjct: 197 PVLTPLLFSGKDIFMARFLDALVAHGIYVDANIDEKRKPADAFCIVNRFHTIDQILMRML 256

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA------ 257
             +   +  A   +   +  +      SA   ++ L+  I G      +    +      
Sbjct: 257 KESNNLYAEAMYYQIAASTGNHPASARSARAVERRLVDKI-GLDASRYKFADGSGLSLYN 315

Query: 258 --------SLLSMGFYN 266
                    +L   + N
Sbjct: 316 YVSAELEVKMLRYAYKN 332


>gi|46358560|gb|AAS88589.1| ORN-6 beta-lactamase [Raoultella ornithinolytica]
          Length = 291

 Score = 43.0 bits (99), Expect = 0.056,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G +++       +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLSGYRAGERFPMMSTFKVLLCGAVLSRVDTGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLADGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTTFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T      IL   +           Q++   ++ K       +     
Sbjct: 165 LNEARPGDVRDTTTPEAMARILRNLLTGRVLSPASQQQLQRWMVEDKVAGPLLRSALPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L A     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTATPASMDERNKQIAAI 276


>gi|254469344|ref|ZP_05082749.1| beta-lactamase [Pseudovibrio sp. JE062]
 gi|211961179|gb|EEA96374.1| beta-lactamase [Pseudovibrio sp. JE062]
          Length = 295

 Score = 43.0 bits (99), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 58/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
           E+  D  +  AS  K +    V + +   +  L   +  SK         +       M 
Sbjct: 63  ESRADERFPMASTFKALLCGAVLARVDRGEERLGEVVAYSKAELVSYSPVTKKHVAEGMR 122

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +    +  +  S N  A  + + +   +   +F++ + +    L         A      
Sbjct: 123 VGELCEATVTMSDNTAANLLLKRVDGPKGLTRFLRGLGDRVTRLDRREPEMNEAKPGDAR 182

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +    +  L   +  +  Q     Q++   +  K                  K+G  
Sbjct: 183 DTTSPRAVVQTLDRLLFEEVLQPSSRAQLQQWMVDDKVADALIRKHLPSDWRIADKSGAG 242

Query: 222 CASGFNIVASAIQG-DQSLIAVI 243
                 I+A+      +  +A +
Sbjct: 243 HNGSRGIIAAIWPETGEPYLAAV 265


>gi|84782649|gb|ABC61673.1| beta-lactamase CTX-M-14 [Klebsiella pneumoniae]
          Length = 212

 Score = 43.0 bits (99), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 39/134 (29%), Gaps = 15/134 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPYYTL------------LD-TNTGHVIAENYPDHP 50
           F     + +L    P  +     +     L            +D  +   V+     D  
Sbjct: 11  FAAAACIPLLLGSAPLYAQTSAVQQKLAALEKSSGGRLGVALIDTADNTQVLY--RGDER 68

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S +K+M A  V    + +K +L  P+ I           +      TMTL      
Sbjct: 69  FPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAEKHVNGTMTLAELSAA 128

Query: 111 LIVKSANDIAVAIA 124
            +  S N     + 
Sbjct: 129 ALQYSDNTAMNKLI 142


>gi|314982852|gb|EFT26944.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Propionibacterium acnes HL110PA3]
 gi|315091170|gb|EFT63146.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Propionibacterium acnes HL110PA4]
          Length = 364

 Score = 43.0 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 17/40 (42%)

Query: 34 LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
          +D  TG  + ++  +    PAS  K++TA  +        
Sbjct: 1  MDAATGETLYQSGQNSLLTPASNLKVLTAIALLDCTDAGH 40


>gi|298386969|ref|ZP_06996523.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 1_1_14]
 gi|298260119|gb|EFI02989.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 1_1_14]
          Length = 468

 Score = 43.0 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 13/79 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT-------------LLDTNTGHVIAENYP 47
          M+++L+ + +++          A  +++                 + D      +     
Sbjct: 1  MKKYLLFLVLSVALLPASVWGQANLSQIDSLIKRMLPEASEVGISVYDLTAKKSLYTYRD 60

Query: 48 DHPWNPASLTKLMTAYVVF 66
               PAS  KL+TA    
Sbjct: 61 TKLSRPASTMKLLTAITAL 79


>gi|210630517|ref|ZP_03296494.1| hypothetical protein COLSTE_00379 [Collinsella stercoris DSM 13279]
 gi|210160430|gb|EEA91401.1| hypothetical protein COLSTE_00379 [Collinsella stercoris DSM 13279]
          Length = 353

 Score = 43.0 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 23/245 (9%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK-LMTAYVVFSFLKEK 72
           +++   L+  E         +D  TG  +    PD     AS  K L + YV  S +++ 
Sbjct: 98  ASVESALAAIEEQGSVSMVFVDAQTGSGL-AYQPDLVVYGASSFKALYSMYVCESLVEKG 156

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
           +  L     +      +   +S    G +  +   ++  ++ S N+   A+ ++      
Sbjct: 157 EVSLDDYCAV-----NWVADSSGGYSGGSYPVYELIEAAVIYSNNNAYGALRDAFD---- 207

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
              +  ++    LG +   +        +   ++AR    L   +           Q   
Sbjct: 208 --FEGFDDWVTGLGANDAVYREDSWFPTYAARSSAR----LWSEMLAYVGGGSETAQWLW 261

Query: 193 LEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVA-----SAIQGDQSLIAVIL-GA 246
                         +         K G+   S  +  +           ++ I  I+ G 
Sbjct: 262 DLTGQTTVSFIRDGLEGLDAVVHNKAGWCSDSDPSYNSVSDAGVVDLDGRTYIMSIMTGM 321

Query: 247 LDRNT 251
            D  +
Sbjct: 322 PDTES 326


>gi|1345608|sp|P80545|BLAC_SERFO RecName: Full=Beta-lactamase; AltName: Full=Penicillinase;
           Contains: RecName: Full=Beta-lactamase form I; Contains:
           RecName: Full=Beta-lactamase form II
          Length = 267

 Score = 43.0 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 64/230 (27%), Gaps = 8/230 (3%)

Query: 33  LLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+D  +   ++     D  +   S +K+M    +    +  K +L   + I ++      
Sbjct: 28  LIDTADNSQILY--RGDERFPMCSTSKVMAVSALLKQSETDKNLLAKRMEIKQSDLVNYN 85

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             +     + MTL       I  S N     I E L    K          K   L  T 
Sbjct: 86  PIAEKHLDTGMTLAEFSAATIQYSDNTAMNKILEHLGGPAKVTEFARTIGDKTFRLDRTE 145

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                 +      TT+     +S +  T         + + +E                 
Sbjct: 146 PTLNTAIPGDKRDTTSPQAMAISLQNLTLGKALAEPQRAQLVEWMKGNTTGGASIRAGLP 205

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                G KTG       N +A     +   L+ V      +  +N  +  
Sbjct: 206 TTWVVGDKTGSGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 253


>gi|299536860|ref|ZP_07050167.1| beta-lactamase [Lysinibacillus fusiformis ZC1]
 gi|298727684|gb|EFI68252.1| beta-lactamase [Lysinibacillus fusiformis ZC1]
          Length = 270

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 12/190 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           +  T  ++  +  +  ++ ASL K+     + S++++ K  L + +TIS        S  
Sbjct: 22  NLTTNQLLISHQLEASFSSASLIKVPILLALLSYIEKNKLSLDSTLTISPT-DWVDFSVI 80

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
           + ++ +  T    L  +I+ S N     + + +          +N+  +++GL  T    
Sbjct: 81  SEQRLTQSTFYELLVWMIITSDNTATNVLIDVVGMAY------LNDYFQHIGLQDTLLQR 134

Query: 155 AHGVVQH-----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
               V        + T+ARDMA L   I         Y ++    +  ++  ++      
Sbjct: 135 KMMDVDRLAKGIDNRTSARDMAHLYTCIYQQELLSPPYNKLVIDILSRQRVHDSLKRYLI 194

Query: 210 FLGADGMKTG 219
                  KTG
Sbjct: 195 EDVRLAHKTG 204


>gi|229109941|ref|ZP_04239522.1| Beta-lactamase [Bacillus cereus Rock1-15]
 gi|228673508|gb|EEL28771.1| Beta-lactamase [Bacillus cereus Rock1-15]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEASVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|229145119|ref|ZP_04273511.1| Beta-lactamase [Bacillus cereus BDRD-ST24]
 gi|228638317|gb|EEK94755.1| Beta-lactamase [Bacillus cereus BDRD-ST24]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +   +   K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNEIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|224460107|gb|ACN43604.1| extended-spectrum beta-lactamase CTX-M-2 [Pseudomonas aeruginosa]
          Length = 242

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 50/186 (26%), Gaps = 4/186 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 47  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 104

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 105 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 164

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 165 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 224

Query: 214 DGMKTG 219
            G KTG
Sbjct: 225 VGDKTG 230


>gi|83645112|ref|YP_433547.1| beta-lactamase class A [Hahella chejuensis KCTC 2396]
 gi|83633155|gb|ABC29122.1| Beta-lactamase class A [Hahella chejuensis KCTC 2396]
          Length = 299

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 4/229 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASE 88
              +LDT TG           +   S  K++    + + +   +  L   + I  ++   
Sbjct: 54  GVMVLDTQTGRT-WGQRGQERFPLCSTFKVLACAALLAKVDAGEENLERRVPIHARDIVT 112

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLG 146
           Y P       G  MTL    +  + KS N  A  + +++       ++++ + + +  L 
Sbjct: 113 YSPVTKDRIGGEGMTLRELCQAAMTKSDNTAANLVLKAVGGPPRLTEYLRGLGDETTRLD 172

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
              T    A         + A   + L               Q+    +  +       A
Sbjct: 173 RWETELNEATPGDPRDTTSPAAMASTLQTLFLNSPLSRASRQQLTAWFLANETGDAKLRA 232

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                   G +TG       N VA      +  + V +   +       
Sbjct: 233 GLPQDWRIGDRTGGGAYGSTNDVAVIWPPGREPLIVTVYITETEAAFDD 281


>gi|37521956|ref|NP_925333.1| hypothetical protein glr2387 [Gloeobacter violaceus PCC 7421]
 gi|35212955|dbj|BAC90328.1| glr2387 [Gloeobacter violaceus PCC 7421]
          Length = 417

 Score = 43.0 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 75/226 (33%), Gaps = 9/226 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             +  ++  +G  +A       ++ AS+ K+         +   +  L   + + +    
Sbjct: 170 SGFMFVEPASGRYVAMADG-ESFSAASVIKVPVLVEFLRQVDSGRLKLDDTLILRQEHKG 228

Query: 89  YPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                  +      M+  N  +L+IV+S N     I + +         ++N      GL
Sbjct: 229 GGSGWMQYMPNGKRMSAYNVARLMIVRSDNTATNMIIDLV-----GGADYLNAQFGRWGL 283

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
             T        ++  + T+  DMA L               + KG E+ G+    +   V
Sbjct: 284 RTTRINAPLPDLEGTNTTSPADMA-LLLTELERGRLVTTQMRAKGYELMGRTRTGSLLPV 342

Query: 208 GTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
           G   GA  + KTG       +     +   +  +AV L     N R
Sbjct: 343 GLGPGAKILHKTGDIGKMVGDAAVVTMPDGRRYVAVALVERPHNDR 388


>gi|326798494|ref|YP_004316313.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Sphingobacterium sp. 21]
 gi|326549258|gb|ADZ77643.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Sphingobacterium sp. 21]
          Length = 477

 Score = 43.0 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 14/80 (17%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAENY 46
          +R +L++I  ++ +  +      + N                   T+LD  TG VI    
Sbjct: 9  IRFWLILIVFSLTTQSYAQSLEQKINIAYQQFESNPNLKYGTASLTVLDAKTGSVIFSKN 68

Query: 47 PDHPWNPASLTKLMTAYVVF 66
           +     AS  K +T+   F
Sbjct: 69 GNTGLATASTLKTITSAAAF 88


>gi|221229316|gb|ABO61012.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 301

 Score = 43.0 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 57/213 (26%), Gaps = 2/213 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K +    V S     +  L T + I+         
Sbjct: 59  VLNTGNGRRIGGHRQDERFPMCSTFKSLLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 118

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 119 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEP 178

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 179 DVNLFVKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGT 238

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               G KTG       N +A           V+
Sbjct: 239 RWRVGDKTGSNGDDTRNDIAVLWPHGGGTAWVV 271


>gi|303233197|ref|ZP_07319870.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
 gi|302480782|gb|EFL43869.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
          Length = 434

 Score = 43.0 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/226 (11%), Positives = 59/226 (26%), Gaps = 10/226 (4%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +A        +++   TG    +   +     AS+ KL         +          
Sbjct: 191 QVVAPYGNAVSVSVVAIRTGAT-CDINANKQVISASMIKLAVMAAYLQAVDAGTINPQQA 249

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           + +++            ++  T T D   + +I+ S N    A+       +   V  +N
Sbjct: 250 LPLARIKIVGGTGKIQSERARTYTYDALCRYMIMYSDNTATNALI------DDLGVDAVN 303

Query: 140 NTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKK 199
           + ++ LG + T        +  G         +                Q         +
Sbjct: 304 SRARELGCTHTTLNRKLMQLNTGVENYTSAADVSRLLCAFYTQTAASAGQCTKAMDFLLQ 363

Query: 200 YPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
             + +       G     KTG       +      +       V++
Sbjct: 364 QTDGDGIPQGLSGVQFAHKTGTLSGIRHDGGIVMERS--PYTIVVM 407


>gi|325287404|ref|YP_004263194.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cellulophaga lytica
          DSM 7489]
 gi|324322858|gb|ADY30323.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cellulophaga lytica
          DSM 7489]
          Length = 431

 Score = 43.0 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          + D  +   I E      + PAS TK+ T Y    
Sbjct: 55 VYDPVSNKTIFEKNSTKYFTPASNTKIFTLYTALK 89


>gi|297570851|ref|YP_003696625.1| D-alanyl-D-alaninecarboxypeptidase/
           D-alanyl-D-alanine-endopeptidase [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296931198|gb|ADH92006.1| D-alanyl-D-alaninecarboxypeptidase/
           D-alanyl-D-alanine-endopeptidase [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 453

 Score = 43.0 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             Y ++D  +G  +A +       PAS  K +TA    + L     + T+   + ++   
Sbjct: 87  SSYAVIDPLSGKTVASHNEAKSLRPASTLKYVTAVAALTTLGPNATLDTSVTRVGRDVYL 146

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
               +     G       A +  +   A  +A  + ++        V 
Sbjct: 147 VGGGDVMLAAGDGQPSAVAGRSGLADMARQVAQKLQKAKVSEITVHVD 194


>gi|108804547|ref|YP_644484.1| beta-lactamase [Rubrobacter xylanophilus DSM 9941]
 gi|108765790|gb|ABG04672.1| beta-lactamase [Rubrobacter xylanophilus DSM 9941]
          Length = 576

 Score = 43.0 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 68/215 (31%), Gaps = 11/215 (5%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G       PD  +  AS  K+     V+  + + +   +  I  ++          
Sbjct: 312 DLKSGAG-YGVRPDQVFFSASTIKVPVMIAVYRRIDQGRLHYSDRIVTTEEDWAAGAGWL 370

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM- 153
            ++     +       L++  ++++A      L         ++N  +++LG   T    
Sbjct: 371 RWQTPGARSTVEDALWLMIAQSDNVATNALVRLV----GGPGYVNEVARSLGAEDTALHW 426

Query: 154 ----NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                   V    + TT RDMA+L  +I++      +  +     ++           G 
Sbjct: 427 KLSSERAAVPSLDNRTTPRDMALLLAKIRSGEAASRYACREMLGLLEQNNLEWWI-EGGV 485

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             G      G    S +N        ++  +  + 
Sbjct: 486 PPGVKVANKGGWLDSTYNDAGIVEYEERPYVLAVF 520


>gi|256826251|ref|YP_003150211.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Kytococcus sedentarius DSM 20547]
 gi|256689644|gb|ACV07446.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Kytococcus sedentarius DSM 20547]
          Length = 536

 Score = 43.0 bits (99), Expect = 0.061,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLM-TAYVV 65
           D  TG V+ +   + P + AS+TKL+ TA VV
Sbjct: 152 DAATGEVLLQQNAERPNHLASMTKLVSTAAVV 183


>gi|118586937|ref|ZP_01544370.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni ATCC BAA-1163]
 gi|118432664|gb|EAV39397.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni ATCC BAA-1163]
          Length = 264

 Score = 43.0 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 78/214 (36%), Gaps = 7/214 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                  + N G +I++      +  + L++L+  Y V S ++ KK  L TP+ +S+  S
Sbjct: 8   AQSSLFAELN-GKIISKKNVRKTFPISDLSRLVLIYEVLSAIRSKKISLDTPLIVSEKIS 66

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +   +      F+ G   T+  A+++L++ S    A  + E +    +K+        K
Sbjct: 67  LFSKKDRSAAMHFQIGEFFTVKQAIEILLIMSEKSAAYLLIEKIFGNLEKWRSETARFLK 126

Query: 144 NLGLSA--THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
              +       +         +  +A  +  +  ++  DFP+ +   Q K    +  +  
Sbjct: 127 QEKIDGLIYEPVGLMSGEGRENLLSAISILKVINKLVNDFPKILAMTQKKQFIFQSDRQV 186

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                       + ++     A  +   ++ I  
Sbjct: 187 QFYRNPSFKQRINNLQISAFFAEKYQKSSNFISD 220


>gi|42781600|ref|NP_978847.1| beta-lactamase [Bacillus cereus ATCC 10987]
 gi|42737523|gb|AAS41455.1| beta-lactamase [Bacillus cereus ATCC 10987]
          Length = 301

 Score = 43.0 bits (99), Expect = 0.062,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+          L   I  +K         
Sbjct: 64  IDTGTNETIAYR-PNERFAFASTYKALAAGVLLQQNSID--TLNEVIKFTKEDLVDYSPI 120

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 121 TEKHIDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 180

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 181 LNEAIPGDIRDTSTAKAIATNLKDFTVGNALPDDKRKVLTDWMKGNATGDKLIRAGVPTD 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 241 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEAIYD 285


>gi|29832334|ref|NP_826968.1| beta-lactamase [Streptomyces avermitilis MA-4680]
 gi|29609453|dbj|BAC73503.1| putative beta-lactamase [Streptomyces avermitilis MA-4680]
          Length = 276

 Score = 43.0 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 12 MLSNIFPFLSIAETNKLPYYTL-LDTNTGHVIAENYP-DHPWNPASLTKLMTAYVVFSFL 69
          M       +     +      +  D   G V+A + P DH +  AS+TK + AY V    
Sbjct: 1  MSLQSLALIENWPVSTAAAAVVRAD---GTVLAAHGPVDHRFPLASVTKPLAAYAVLVAY 57

Query: 70 KEKKAMLTTP 79
          +E    L  P
Sbjct: 58 EEGAVELDEP 67


>gi|33865252|ref|NP_896811.1| beta-lactamase family protein [Synechococcus sp. WH 8102]
 gi|33632421|emb|CAE07233.1| possible beta-lactamase family protein [Synechococcus sp. WH 8102]
          Length = 380

 Score = 43.0 bits (99), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 6/155 (3%)

Query: 18  PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              +  +  +   Y L+  + G   A+ + D P   AS  K          +        
Sbjct: 100 TIAATQKDLQTSAYMLI-LDDGRF-AQMHADRPMPAASSIKTPILLAALQQVDAGDLHWN 157

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            P+ ++K            +   +          +++ +++ A  +            Q 
Sbjct: 158 EPLVLTKELVGGGAGWMASRPLGSRFPTRVAATEMIRVSDNSATNLL----IERVGGQQT 213

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
           +N    +LGL AT   N    +   + T+A D++ 
Sbjct: 214 INQRFDDLGLRATEVNNWLPDLDGTNTTSAHDLSR 248


>gi|269796488|ref|YP_003315943.1| D-alanyl-D-alanine carboxypeptidase [Sanguibacter keddieii DSM
           10542]
 gi|269098673|gb|ACZ23109.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Sanguibacter keddieii DSM 10542]
          Length = 469

 Score = 43.0 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + + +   L+           + D  TG V+    P  P  PAS+ K+ TA    
Sbjct: 78  LQAAVDALLADPAMGTSVGVVVSDALTGEVLVSATPGTPRVPASIQKIFTAAAAL 132


>gi|258626438|ref|ZP_05721283.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio mimicus VM603]
 gi|258581281|gb|EEW06185.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio mimicus VM603]
          Length = 481

 Score = 43.0 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNK-----LPYYTLL-DTNTGHVIAENYPDHPWNPAS 55
          R  L+   +  +S+++    +            Y  ++ DT +     E      + PAS
Sbjct: 8  RWLLLFFGLLCVSSVYAESLVNSAINKLPAGSRYALMVEDTVSKQTTLELNTHLYYPPAS 67

Query: 56 LTKLMTAYVV 65
            K++TA   
Sbjct: 68 TQKILTALAA 77


>gi|51892073|ref|YP_074764.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
 gi|51855762|dbj|BAD39920.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
          Length = 407

 Score = 43.0 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
               +D  TG    E     P+ PAS  KL  A  V   +   +    T +T ++   E 
Sbjct: 175 SVVAVDLTTGSR-YEFRARDPYLPASTFKLPVALCVLEAIDAGEMAWNTLVTYTEEDYEP 233

Query: 90  PP 91
             
Sbjct: 234 VG 235


>gi|152979121|ref|YP_001344750.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          succinogenes 130Z]
 gi|150840844|gb|ABR74815.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus succinogenes 130Z]
          Length = 475

 Score = 43.0 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 5/69 (7%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASL 56
          ++ L+     + +        A            +   + ++G +IA+        PAS 
Sbjct: 6  KKILISTFFFVGTASAQVDVQALSKELPQGASLGFVAKNLHSGEIIADYNASTFMLPAST 65

Query: 57 TKLMTAYVV 65
           K  TA   
Sbjct: 66 QKTFTALAA 74


>gi|229044232|ref|ZP_04191906.1| Beta-lactamase [Bacillus cereus AH676]
 gi|228725103|gb|EEL76386.1| Beta-lactamase [Bacillus cereus AH676]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.064,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|325528473|gb|EGD05596.1| Beta-lactamase [Burkholderia sp. TJI49]
          Length = 269

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 27/235 (11%), Positives = 57/235 (24%), Gaps = 20/235 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-YPDHPWNPASLTKL 59
           M+ +   + +     +    + A T       + D  TG V+ +         PAS  K+
Sbjct: 1   MKHWRHALFVVTAGLLTTAAAQARTLCT---VVADAATGRVLVQQGDCATRVTPASTFKV 57

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
             + + F        +L    T + +     P                +KL I   +  +
Sbjct: 58  AISLMGFDA-----GVLKDEHTPTLDFHAGYPDWGGAPWREPTDPARWMKLSIFWYSEQV 112

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
             A+ ++               +   G       +  G +             +S   + 
Sbjct: 113 TQALGQA----------RFQQYTNAFGYGNADVTSRQGELSGVMGAWVNSSLQISPLEQV 162

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAI 233
            F + +    +                           KTG          + A 
Sbjct: 163 GFMRRIANRTLPVSAHAYDMTERITLIDRQPDGWIVHGKTGTGSPGARYDASHAY 217


>gi|325105570|ref|YP_004275224.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Pedobacter saltans
          DSM 12145]
 gi|324974418|gb|ADY53402.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Pedobacter saltans
          DSM 12145]
          Length = 427

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 16/79 (20%)

Query: 1  MRQFLVIIAMAMLSNIFPFL-----SIAETNKLP-----------YYTLLDTNTGHVIAE 44
          M ++L +I +A+      F      +                    + L D  + + + E
Sbjct: 1  MNRYLSLIFLALFLTNPSFSQKKKKASEVNLLAQKIEETEGEFLSGFILKDLESNNTVYE 60

Query: 45 NYPDHPWNPASLTKLMTAY 63
             +  +   S TK++T  
Sbjct: 61 RNANKKFVLGSNTKVLTLL 79


>gi|134133925|gb|ABO61020.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 298

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A    S  +   A+L   + + +        
Sbjct: 57  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATALSQAERMPALLDRRVPVGEADLLSHAL 115

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 116 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 175

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 176 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 235

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 236 RWRVGDKTGSNGEDARNDIAVLW 258


>gi|229193919|ref|ZP_04320832.1| Beta-lactamase [Bacillus cereus ATCC 10876]
 gi|228589560|gb|EEK47466.1| Beta-lactamase [Bacillus cereus ATCC 10876]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSNRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGIPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAVVWPPNRAPIIIAILSSKDEKEAIYD 296


>gi|238502021|ref|XP_002382244.1| penicillin-binding protein, putative [Aspergillus flavus NRRL3357]
 gi|220691054|gb|EED47402.1| penicillin-binding protein, putative [Aspergillus flavus NRRL3357]
          Length = 394

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 50/166 (30%), Gaps = 18/166 (10%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTN-TGHVIAENYP---------------DHPWNP 53
           M+    +    +     ++P   ++  + +G +I                    D  +  
Sbjct: 1   MSFTEALKAATAPGPDQRIPGVVVMAADASGKIIFSEAEGQTSIDTDVAKPMTTDTTFWI 60

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
           AS TKL+T       +++    L  P+       + P   + F   S   L  A K + +
Sbjct: 61  ASCTKLITTVAALQCVEKGILQLDDPVYKVLPEWKTPEILTGFDDLSEPQLKLATKKITL 120

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           +    +  +                    ++LG S    +N   + 
Sbjct: 121 RQL--LTHSSGMGYDFLSPDLASWRRWKGQSLGASEEPIINRLALP 164


>gi|30020602|ref|NP_832233.1| Beta-lactamase [Bacillus cereus ATCC 14579]
 gi|229130884|ref|ZP_04259815.1| Beta-lactamase [Bacillus cereus BDRD-Cer4]
 gi|29896154|gb|AAP09434.1| Beta-lactamase [Bacillus cereus ATCC 14579]
 gi|228652566|gb|EEL08473.1| Beta-lactamase [Bacillus cereus BDRD-Cer4]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.065,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|254685078|ref|ZP_05148938.1| beta-lactamase [Bacillus anthracis str. CNEVA-9066]
 gi|254722484|ref|ZP_05184272.1| beta-lactamase [Bacillus anthracis str. A1055]
 gi|254737525|ref|ZP_05195228.1| beta-lactamase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254743287|ref|ZP_05200972.1| beta-lactamase [Bacillus anthracis str. Kruger B]
 gi|254751840|ref|ZP_05203877.1| beta-lactamase [Bacillus anthracis str. Vollum]
 gi|254760360|ref|ZP_05212384.1| beta-lactamase [Bacillus anthracis str. Australia 94]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 75  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTKWMKGNATGDKLIRAGVPTN 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 296


>gi|284159975|ref|YP_001063864.2| class D beta-lactamase [Burkholderia pseudomallei 668]
 gi|283775156|gb|ABN88168.2| class D beta-lactamase [Burkholderia pseudomallei 668]
          Length = 269

 Score = 43.0 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-NGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|227497058|ref|ZP_03927308.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces urogenitalis DSM 15434]
 gi|226833455|gb|EEH65838.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces urogenitalis DSM 15434]
          Length = 465

 Score = 43.0 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 16/37 (43%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
                  ++D  TG  + ++       PAS  KL+TA
Sbjct: 89  TASTAVAIIDVATGQTLVDHNASTALTPASSNKLLTA 125


>gi|116491873|ref|YP_803608.1| Beta-lactamase class A [Pediococcus pentosaceus ATCC 25745]
 gi|116102023|gb|ABJ67166.1| Beta-lactamase class A [Pediococcus pentosaceus ATCC 25745]
          Length = 391

 Score = 43.0 bits (99), Expect = 0.066,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 14/217 (6%)

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLI 112
           AS  KL      +  + E K  L    T+   +  +          GS +++ + L+ ++
Sbjct: 173 ASNIKLFILITAYQQVNEGKLNLNDKYTLKDSDKVDGTGEIRNMSSGSEISMQDLLEDMM 232

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-----HGHYTTA 167
             S N  A  +   L       +  +N   K +G   T                 +YT+ 
Sbjct: 233 EDSDNTAANIVIRQL-----GGMDKVNAQIKKIGAKDTKLERMLMDTDALKDGKDNYTSV 287

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
            D+ ++  +I         Y       +K                    KTG     G  
Sbjct: 288 ADLGMVLKKIYNHQMVSTKYDNAMLDILKKNNNHTKLPHDLPEEATVYNKTGEFDDYGVE 347

Query: 228 IVASAIQGDQ-SLIAVILGALDRNTRNKVSASLLSMG 263
             A+    ++ S + V++      +R++    + S G
Sbjct: 348 NDAAIFGNNKGSFVIVVM--SQDGSRDEQIKKMNSFG 382


>gi|296392831|ref|YP_003657715.1| D-alanyl-D-alaninecarboxypeptidase/
           D-alanyl-D-alanine-endopeptidase [Segniliparus rotundus
           DSM 44985]
 gi|296179978|gb|ADG96884.1| D-alanyl-D-alaninecarboxypeptidase/
           D-alanyl-D-alanine-endopeptidase [Segniliparus rotundus
           DSM 44985]
          Length = 494

 Score = 43.0 bits (99), Expect = 0.067,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
              +LD  +G  + +  PD    PAS  KL+TA
Sbjct: 122 SGVVLDGVSGAALWQRDPDAAMTPASTMKLLTA 154


>gi|288962172|ref|YP_003452467.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
 gi|288914438|dbj|BAI75923.1| D-alanyl-D-alanine carboxypeptidase [Azospirillum sp. B510]
          Length = 492

 Score = 43.0 bits (99), Expect = 0.068,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 24 ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +    + L D + G V+     D P  PAS+ KL T     
Sbjct: 50 PDSAAIGHILFDPDDGRVLDALAADTPVIPASVAKLPTVAAAL 92


>gi|317970457|ref|ZP_07971847.1| putative beta-lactamase [Synechococcus sp. CB0205]
          Length = 349

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 52/163 (31%), Gaps = 8/163 (4%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             A+        +  +   +  Y L+  + G   AE  P  P   AS  K     V    
Sbjct: 63  LTALSKRWAQLAAQYKDLTVSGYLLV-LDDGRF-AELAPQRPLPAASSIKTPILLVALED 120

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESL 127
           L   K      + ++K            K   +T     A   +I  S N     + + +
Sbjct: 121 LDAGKLRWDERLPMTKEVVGGGAGWMANKPVGTTFPFWEAANEMIRVSDNTATNLLIKRV 180

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
                     +N   + LGLS+T   N    +   + T+A D+
Sbjct: 181 -----GGKAVINARFQALGLSSTVVNNWLPDLDGTNTTSAYDL 218


>gi|283778706|ref|YP_003369461.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Pirellula staleyi DSM 6068]
 gi|283437159|gb|ADB15601.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Pirellula staleyi DSM 6068]
          Length = 524

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 11 AMLSNIFPFLSIAETNKLPYYTL-LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          ++   +          +  +  L +D  +G V+ E      + PAS+TKL +      +
Sbjct: 32 SLAMAVQALADQPLYAQAHWGILAVDLESGEVVLERDSGKLFAPASVTKLFSCASALDY 90


>gi|196232517|ref|ZP_03131369.1| serine-type D-Ala-D-Ala carboxypeptidase [Chthoniobacter flavus
           Ellin428]
 gi|196223279|gb|EDY17797.1| serine-type D-Ala-D-Ala carboxypeptidase [Chthoniobacter flavus
           Ellin428]
          Length = 167

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 55/166 (33%), Gaps = 29/166 (17%)

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTT-------ARDMAILSWRIKTDFPQYMHYFQI 190
           MN  ++  G+  T F+N HG+               A+  A         F       +I
Sbjct: 1   MNALARTKGMRNTKFLNPHGLDNLERSVPYSTADDLAKLTAYAMANSAFRFYVSQRERKI 60

Query: 191 KGLEIKG-----KKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD--------- 236
                           NTN  +G     DG+KTG T  +G  ++ SA +           
Sbjct: 61  TIFSFSTGGQSAYLLRNTNELLGINS-IDGVKTGTTARAGQCVIISAARTPESRQEGETH 119

Query: 237 ----QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIK 278
               + L  V+LGA +   R   + +LL+ G+             K
Sbjct: 120 VITPRRLNVVVLGATN---RFANAQALLARGWQLYDAWAAAGRPAK 162


>gi|163735223|ref|ZP_02142658.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter litoralis Och 149]
 gi|161391437|gb|EDQ15771.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter litoralis Och 149]
          Length = 499

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            + + D  TG ++    P+    PAS+TK +TA     
Sbjct: 63  AFAVADAKTGEILEARTPELGIAPASVTKAITALYALD 100


>gi|228939651|ref|ZP_04102233.1| Beta-lactamase [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228972512|ref|ZP_04133119.1| Beta-lactamase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228979122|ref|ZP_04139469.1| Beta-lactamase [Bacillus thuringiensis Bt407]
 gi|228780597|gb|EEM28817.1| Beta-lactamase [Bacillus thuringiensis Bt407]
 gi|228787195|gb|EEM35167.1| Beta-lactamase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228819989|gb|EEM66032.1| Beta-lactamase [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|326940243|gb|AEA16139.1| Beta-lactamase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 312

 Score = 43.0 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRKMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D    +  
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEASYD 296


>gi|113970270|ref|YP_734063.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella sp. MR-4]
 gi|113884954|gb|ABI39006.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella sp. MR-4]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 14 SNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          S     ++           L  D +T  ++     D  + PAS  K++TA    
Sbjct: 46 STFAKQIADIAPRHSQVALLARDLSTNTLLYSQQADTLFIPASTQKVLTAVTAM 99


>gi|114047539|ref|YP_738089.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella sp. MR-7]
 gi|113888981|gb|ABI43032.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella sp. MR-7]
          Length = 513

 Score = 43.0 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 14 SNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          S     ++           L  D +T  ++     D  + PAS  K++TA    
Sbjct: 46 STFAKQIADIAPRHSQVALLARDLSTNTLLYSQQADTLFIPASTQKVLTAVTAM 99


>gi|294678149|ref|YP_003578764.1| penicillin-binding protein 4 [Rhodobacter capsulatus SB 1003]
 gi|294476969|gb|ADE86357.1| penicillin-binding protein 4 [Rhodobacter capsulatus SB 1003]
          Length = 482

 Score = 43.0 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 14/38 (36%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           Y + D  +G V+       P  PAS  K +T      
Sbjct: 51 GYVVADARSGLVLEARDGGKPMAPASTAKAITTLYALE 88


>gi|126731191|ref|ZP_01746999.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Sagittula stellata E-37]
 gi|126708493|gb|EBA07551.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Sagittula stellata E-37]
          Length = 500

 Score = 42.7 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           + D  TG V+  + PD    PAS+ K +T+    
Sbjct: 67  VSDAATGEVLESHDPDQGLPPASVAKALTSGYAL 100


>gi|260905548|ref|ZP_05913870.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Brevibacterium linens BL2]
          Length = 485

 Score = 42.7 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMT 61
           D  +  ++     + P  PAS+TK++T
Sbjct: 108 DGLSDDILYAKNENKPRTPASVTKVLT 134


>gi|294013124|ref|YP_003546584.1| beta-lactamase class A [Sphingobium japonicum UT26S]
 gi|292676454|dbj|BAI97972.1| beta-lactamase class A [Sphingobium japonicum UT26S]
          Length = 323

 Score = 42.7 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
           D  TG  +     D  +  AS  KL  A  + S L      L  P+ 
Sbjct: 61  DLGTGETL-AYNGDTLFPMASTYKLAVAAKILSLLDAGSLSLDEPLM 106


>gi|297201396|ref|ZP_06918793.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sviceus ATCC 29083]
 gi|197713804|gb|EDY57838.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces sviceus ATCC 29083]
          Length = 458

 Score = 42.7 bits (98), Expect = 0.074,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 20/58 (34%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A+   + P L            ++D  +G  +          PAS TK+ TA    S 
Sbjct: 77  ALADVLGPLLGNTALGTRHTAAVVDVASGRRLYGAGAGTALIPASTTKIATAVAALSA 134


>gi|254421584|ref|ZP_05035302.1| beta-lactamase, putative [Synechococcus sp. PCC 7335]
 gi|196189073|gb|EDX84037.1| beta-lactamase, putative [Synechococcus sp. PCC 7335]
          Length = 511

 Score = 42.7 bits (98), Expect = 0.074,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 67/251 (26%), Gaps = 7/251 (2%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +A L      L    T  +P     D +TG        +     AS  KL      F  +
Sbjct: 226 IAPLKAALQALPDQYTGLVPKVFYADVDTGE-YVSVGGEEAIAAASTIKLPILLAFFEDV 284

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              +  L   +++          +       T      +   ++ ++++ A  +   L  
Sbjct: 285 DAGRIDLMKTMSMKPEQIASGSGDMQVADPKTQYTALEVASQMIVTSDNTATNMMIDLLG 344

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
             +       N             +  G     + T+ARD+A     I       +    
Sbjct: 345 GPEALNNRFINYGLETTQLNAPLPDLEGT----NLTSARDLAHTMLLISQGESLTVRSRD 400

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGA-DGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GAL 247
                +   +  +   A     GA    KTG   +   +I    +   +  +   L    
Sbjct: 401 HILNILNRTRSKDLLPATLEEKGALTYNKTGDIRSVLGDIALVDLPNGKRYVVAALVQRP 460

Query: 248 DRNTRNKVSAS 258
             + R      
Sbjct: 461 SNDIRAAELIR 471


>gi|308097805|gb|ADO14463.1| oxacillinase OXA-114g [Achromobacter xylosoxidans]
          Length = 275

 Score = 42.7 bits (98), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/243 (7%), Positives = 52/243 (21%), Gaps = 11/243 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + PAS  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQGTQQACAERYTPASTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAKA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    ++ G      +++  +         R    +  R 
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGRHNGTDGAWIISSLRISPLEQLAFLR---KVVNRQ 178

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
                             +   +           G++G+ T          V  A +  +
Sbjct: 179 LPVKAAAYELADNLFEVGQADGWRLYGKTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLI 240
            L+
Sbjct: 237 QLV 239


>gi|81345570|gb|ABB71442.1| beta-lactamase [Pseudomonas aeruginosa]
          Length = 288

 Score = 42.7 bits (98), Expect = 0.075,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 17/255 (6%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASL-TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           +   S  T +  A +++   ++ K    + + I K            + G  +TLD+A  
Sbjct: 61  FPLTSTFTTIACAKLLYDA-EQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACF 119

Query: 110 LLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             +  S N  A  I  ++   K    F++ + +    L                   T  
Sbjct: 120 ATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPK 179

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              + L+  +       M+  +++   +  +   N   +V         ++G       +
Sbjct: 180 AIASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARS 239

Query: 228 IVASAIQGDQSLIAV 242
           I A      Q+ I V
Sbjct: 240 ITAVVWSEHQAPIIV 254


>gi|84502891|ref|ZP_01001004.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Oceanicola batsensis HTCC2597]
 gi|84388874|gb|EAQ01744.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Oceanicola batsensis HTCC2597]
          Length = 497

 Score = 42.7 bits (98), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 1/56 (1%)

Query: 13  LSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           L+     +             + D   G  +    P  P  PAS+ K +TA     
Sbjct: 45  LALTAERIVEEANLSGEAAFTVFDLTRGRPLEARSPTRPMPPASVAKALTALYALD 100


>gi|94984424|ref|YP_603788.1| beta-lactamase [Deinococcus geothermalis DSM 11300]
 gi|94554705|gb|ABF44619.1| beta-lactamase [Deinococcus geothermalis DSM 11300]
          Length = 315

 Score = 42.7 bits (98), Expect = 0.075,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 14/38 (36%)

Query: 39 GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
          G  +    PD  +  AS  K+    +  S  +  +  L
Sbjct: 62 GRELYALNPDRVFPAASTIKVPLLLLALSEAQAGRLDL 99


>gi|298501376|gb|ADI82848.1| beta-lactamase OXY-5 [Klebsiella pneumoniae]
          Length = 290

 Score = 42.7 bits (98), Expect = 0.076,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 78/285 (27%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKHSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K         +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKADLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F Q + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFAQSIGDVTFRLDRMEPALNSAIPGDERDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 246 NDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 290


>gi|51893570|ref|YP_076261.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
 gi|51857259|dbj|BAD41417.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
          Length = 301

 Score = 42.7 bits (98), Expect = 0.076,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 11/213 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-KNASEYPPS 92
            D +T         D  +  AS  K++ A  ++      +  L  P+ I   +  +    
Sbjct: 66  YDLSTHET-FGVRADEVYTAASTVKVLIANYLYHLAATGQVSLDEPLAIRAVDWKDGSGI 124

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +    G+ + L    +L++V S N  A A+   L          M    ++LG+     
Sbjct: 125 LNGVPDGTRLPLREVARLMLVHSDNTAANALMRRLGVQP------MVQYYRSLGIRYGTP 178

Query: 153 -MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
            M+  G +  G+     D+ I+   I     +    ++     ++  +      A     
Sbjct: 179 RMHTPGELWEGNRIAPEDLGIVLRNIWEAARRSPEPWEELLGFMRESRSKGRIPAGLPSH 238

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                KTG          A+ +   +  + V++
Sbjct: 239 VPMANKTG--SKGTSFHDAALVLDRRPYVLVVM 269


>gi|255533536|ref|YP_003093908.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Pedobacter heparinus DSM 2366]
 gi|255346520|gb|ACU05846.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Pedobacter heparinus DSM 2366]
          Length = 468

 Score = 42.7 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 19 FLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          FL+  +T       L+ D NTG  +     +     AS  K +TA   F
Sbjct: 33 FLANPQTRYASTSLLVLDANTGKTLFGRNENIGLATASTLKTITAATAF 81


>gi|29348596|ref|NP_812099.1| penicillin-binding protein D-alanyl-D-alanine carboxypeptidase
          [Bacteroides thetaiotaomicron VPI-5482]
 gi|29340501|gb|AAO78293.1| penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase
          [Bacteroides thetaiotaomicron VPI-5482]
          Length = 468

 Score = 42.7 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 13/79 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT-------------LLDTNTGHVIAENYP 47
          M+++L+ + +++          A  +++                 + D      +     
Sbjct: 1  MKKYLLFLVLSVALLPTSVWGQANLSQIDSLIKRMLPEASEVGISVYDLTAKKSLYTYRD 60

Query: 48 DHPWNPASLTKLMTAYVVF 66
               PAS  KL+TA    
Sbjct: 61 TKLSRPASTMKLLTAITAL 79


>gi|290890592|ref|ZP_06553663.1| hypothetical protein AWRIB429_1053 [Oenococcus oeni AWRIB429]
 gi|290479720|gb|EFD88373.1| hypothetical protein AWRIB429_1053 [Oenococcus oeni AWRIB429]
          Length = 264

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 7/206 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                  + N G +I++      +  + L++L+  Y V S ++ KK  L TP+ +S+  S
Sbjct: 8   AQSSLFAELN-GKIISKKNVRKTFPISDLSRLVLIYEVLSAIRSKKISLDTPLIVSEKIS 66

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +   +      F+ G   T+  A+++L++ S    A  + E +    +K+        K
Sbjct: 67  LFSKKDRSAAMHFQIGEFFTVKQAIEILLIMSEKSAAYLLIEKIFGNLEKWRSETARFLK 126

Query: 144 NLGLSA--THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
              +       +         +  +A  +  +  ++  DFP+ +   Q K    +  +  
Sbjct: 127 QEKIDGLIYEPVGLMSGEGRENLLSAISILKVINKLVNDFPKILAMTQKKQFIFQSDRQV 186

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFN 227
                       + ++     A  + 
Sbjct: 187 QFYRNPSFKQRINNLQISAFFAEKYQ 212


>gi|254927433|gb|ACT85949.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|255964402|gb|ACU44519.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|255964406|gb|ACU44521.1| beta-lactamase CTX-M-15 [Escherichia coli]
 gi|260914756|gb|ACX54229.1| beta-lactamase blaCTX-M-15 [Escherichia coli]
          Length = 241

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 64/240 (26%), Gaps = 27/240 (11%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239


>gi|83953437|ref|ZP_00962159.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Sulfitobacter sp. NAS-14.1]
 gi|83842405|gb|EAP81573.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Sulfitobacter sp. NAS-14.1]
          Length = 503

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           L D  TG V+ +N P     PAS+TK +TA     
Sbjct: 66  LADAETGAVLEQNGPLDGMPPASVTKAITALYALD 100


>gi|83944396|ref|ZP_00956850.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Sulfitobacter sp. EE-36]
 gi|83844719|gb|EAP82602.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Sulfitobacter sp. EE-36]
          Length = 503

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           L D  TG V+ +N P     PAS+TK +TA     
Sbjct: 66  LADAETGAVLEQNGPLDGMPPASVTKAITALYALD 100


>gi|282900879|ref|ZP_06308815.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194217|gb|EFA69178.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Cylindrospermopsis
           raciborskii CS-505]
          Length = 504

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 32  TLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            L+ + ++  ++        + PAS TK++TA   +  
Sbjct: 78  ILIKNLSSDQILYSRDAQKYFIPASTTKILTAAAAWQK 115


>gi|256824220|ref|YP_003148180.1| hypothetical protein Ksed_03380 [Kytococcus sedentarius DSM
          20547]
 gi|256687613|gb|ACV05415.1| hypothetical protein Ksed_03380 [Kytococcus sedentarius DSM
          20547]
          Length = 113

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 1/74 (1%)

Query: 18 PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
          P       +    +TL     G V+ +++    +  AS  K+         ++     L 
Sbjct: 12 PTRPAPPEDPAVGWTLA-AEDGTVLDDHHGTREFYAASTLKVGVLLTALRAVEAGTVDLA 70

Query: 78 TPITISKNASEYPP 91
           P+  ++  +    
Sbjct: 71 DPLVSTRTFTGADG 84


>gi|297563450|ref|YP_003682424.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296847898|gb|ADH69918.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 545

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 13/35 (37%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + D  TG V+          PAS  KL TA     
Sbjct: 81  VTDPATGAVLYSRDSGEQLVPASNMKLFTAAAALD 115


>gi|163940290|ref|YP_001645174.1| Beta-lactamase [Bacillus weihenstephanensis KBAB4]
 gi|163862487|gb|ABY43546.1| Beta-lactamase [Bacillus weihenstephanensis KBAB4]
          Length = 309

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+          L   IT +K+        
Sbjct: 72  IDTGTNRTIAYR-PNERFAFASTYKALAAGVLLQQNSID--KLNEVITYTKDDLVEYSPI 128

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++ M +           
Sbjct: 129 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRQMGDRVTIADRFEPE 188

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 189 LNEATPGDIRDTSTAKAIATNLKAFTVGNALPADKRKVLTEWMKGNATGDKLIRAGVPTD 248

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 249 WIVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEAAYD 293


>gi|114707811|ref|ZP_01440705.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Fulvimarina pelagi
          HTCC2506]
 gi|114536800|gb|EAU39930.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Fulvimarina pelagi
          HTCC2506]
          Length = 396

 Score = 42.7 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 5/71 (7%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPY----YTLLDTNTGHVIAENYPDHPWNPASL 56
          M Q +  +    L         A+            +LD + G  +     D  + PAS+
Sbjct: 1  MFQLIAFVFALALLAAPAKADTADGIAAMAPSGLVLVLDED-GEDLVAQNTDEAFVPASV 59

Query: 57 TKLMTAYVVFS 67
           KL+TA++   
Sbjct: 60 AKLVTAWLAME 70


>gi|325961730|ref|YP_004239636.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467817|gb|ADX71502.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 519

 Score = 42.7 bits (98), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + D  TG V+ +        PAS  KL+TA      
Sbjct: 115 LVQDALTGQVLFDRGGSENRVPASNLKLLTAIAALRA 151


>gi|255261596|ref|ZP_05340938.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Thalassiobium sp. R2A62]
 gi|255103931|gb|EET46605.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Thalassiobium sp. R2A62]
          Length = 504

 Score = 42.7 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + L D  TG V+  N       PAS+ K +TA      
Sbjct: 70  AFMLADAETGEVLEANAEQIAQPPASVAKAVTALYALDQ 108


>gi|73913582|gb|AAZ91704.1| PSE-1/CARB-2 beta-lactamase [Escherichia coli]
          Length = 288

 Score = 42.7 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 61  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKTDLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 121 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 180

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 181 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGRNIADRSGAGGFGARSI 240

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 241 TAVVWSEHQAPIIV 254


>gi|182414977|ref|YP_001820043.1| beta-lactamase [Opitutus terrae PB90-1]
 gi|177842191|gb|ACB76443.1| beta-lactamase [Opitutus terrae PB90-1]
          Length = 862

 Score = 42.7 bits (98), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 27/103 (26%), Gaps = 16/103 (15%)

Query: 28  LPYYTLLDTNTGHVIAENY-------------PDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                 +D   G +I                 PD      S++K++TA  V   +++ + 
Sbjct: 33  ATVAVAVD---GRIIFARGYGFADPEAGRPMQPDTRMRIGSISKMLTAAAVLKLVEDGRL 89

Query: 75  MLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
            L     +      Y  +    +                 S+ 
Sbjct: 90  SLQDRAFLGWPTPTYAGAARDPRLDRITVAHLLSHTAGWISSE 132


>gi|226227867|ref|YP_002761973.1| D-alanyl-D-alanine carboxypeptidase [Gemmatimonas aurantiaca T-27]
 gi|226091058|dbj|BAH39503.1| D-alanyl-D-alanine carboxypeptidase [Gemmatimonas aurantiaca T-27]
          Length = 545

 Score = 42.7 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            L+D      I  +  D  + PAS  KL+TA +    
Sbjct: 83  LLVDAERNDTILSHDADRLFMPASNQKLLTAAIALQH 119


>gi|912450|dbj|BAA02999.1| beta-lactamase [Streptomyces fradiae]
 gi|4514651|dbj|BAA75488.1| beta-lactamase [Streptomyces fradiae]
          Length = 306

 Score = 42.7 bits (98), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 54/218 (24%), Gaps = 7/218 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                DT TG  +A    D  +  AS+ K +    V   L     +L   +  + +  + 
Sbjct: 58  GAFAYDTGTGRTVAYR-ADERFPIASMFKTIAVAAVLRDLDRDGEVLARRVHYTADYVKR 116

Query: 90  PPSNSTFKKGST----MTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSK 143
              +            MT+    +  + +S N  A  +           +F + + +   
Sbjct: 117 SGYSPVTGLPENVANGMTVAELCEATLTRSDNTAANLLLHDLGGPTAVTRFCRSVGDHVT 176

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            L        +A         +           I  D        ++    +  +     
Sbjct: 177 RLDRWEPELNSAEPGRVTDTTSPRAIGRTYGRLILGDLLAAHDRERLTRWMLDNRTSDER 236

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                        KTG       N    A    +  + 
Sbjct: 237 FRKGLPADWLLADKTGGGDYGTNNDAGVAWPPGRPPVV 274


>gi|221210663|ref|ZP_03583643.1| beta-lactamase [Burkholderia multivorans CGD1]
 gi|221169619|gb|EEE02086.1| beta-lactamase [Burkholderia multivorans CGD1]
          Length = 269

 Score = 42.7 bits (98), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/235 (11%), Positives = 57/235 (24%), Gaps = 20/235 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-YPDHPWNPASLTKL 59
           M+ +   + +     +    + A +       + D  TG V+ +         PAS  K+
Sbjct: 1   MKHWRHALFVVTAGLLTTAAAQARSLCT---VVADAATGRVLVQQGDCATRVTPASTFKV 57

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
             + + F        +L    T + +     P                +KL I   +  +
Sbjct: 58  AISLMGFDA-----GVLKDEHTPTLDFHAGYPDWGGAPWREPTDPARWMKLSIFWYSEQV 112

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
             A+ ++               +   G       +  G +             +S   + 
Sbjct: 113 TQALGQA----------RFQQYTSAFGYGNADVTSRQGELSGVMGAWVNSSLQISPLEQV 162

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAI 233
            F + +    +                           KTG          + A 
Sbjct: 163 GFMRRIANRTLPVSAHAYDMTERITLIDRQPDGWIVHGKTGTGSPGARYDASHAY 217


>gi|221229328|gb|ABO61017.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 301

 Score = 42.7 bits (98), Expect = 0.086,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 57/213 (26%), Gaps = 2/213 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K +    V S     +  L T + I+         
Sbjct: 59  VLNTGNGRRIGGHRQDERFPMCSTFKSLLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 118

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 119 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSIPRNDRNEP 178

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 179 DVNLFVKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGT 238

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
               G KTG       N +A           V+
Sbjct: 239 RWRVGDKTGSNGDDTRNDIAVLWPHGGGTAWVV 271


>gi|254486946|ref|ZP_05100151.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. GAI101]
 gi|214043815|gb|EEB84453.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. GAI101]
          Length = 497

 Score = 42.7 bits (98), Expect = 0.087,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 7/57 (12%)

Query: 18  PFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             +  A              + + D  TG+++ E  P     PAS+TK +TA     
Sbjct: 44  SAVPKAADLIAQARLNGRVAFAVADAKTGNMLEEMSPSAGMPPASVTKAITALYALD 100


>gi|260914760|gb|ACX54232.1| beta-lactamase blaCTX-M-15 [Escherichia coli]
          Length = 239

 Score = 42.7 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 64/240 (26%), Gaps = 27/240 (11%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHY 164
                 +  S N     +   +               +   L  T       +       
Sbjct: 124 ELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDT 183

Query: 165 TTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           T+ R MA             D  +      +KG             A        G KTG
Sbjct: 184 TSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTG 239


>gi|120403343|ref|YP_953172.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1]
 gi|119956161|gb|ABM13166.1| Beta-lactamase [Mycobacterium vanbaalenii PYR-1]
          Length = 297

 Score = 42.7 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 58/202 (28%), Gaps = 5/202 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD +T   I E   D P+   S  K   A  V    +  +  L   I I           
Sbjct: 58  LDLDTQRGI-EFGADEPFAMCSTFKAYAAAAVLQRTQTGELTLNDAIPIEPGDIRPHSPV 116

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +  + G++M+L    +  + +S N  A  +       +    F + + +    L      
Sbjct: 117 TEPRVGTSMSLAELCQAALQQSDNAAANGLLRVLGGPQAITAFARSIGDHRTRLDRWEVE 176

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
             +   +      T+        +R            + + L+       ++  A     
Sbjct: 177 LNS--ALPGDPRDTSTPRALGDGYRNILTGDVLNPPTRRQLLDWMLANQTSSMRAGLPAG 234

Query: 212 GADGMKTGFTCASGFNIVASAI 233
                KTG       N V  A 
Sbjct: 235 YTSADKTGSGDYGTTNDVGVAY 256


>gi|228969873|ref|ZP_04130603.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family
          S11 [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228789826|gb|EEM37678.1| D-Ala-D-Ala carboxypeptidase A; Serine peptidase; MEROPS family
          S11 [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 66

 Score = 42.7 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 7/52 (13%), Positives = 19/52 (36%), Gaps = 8/52 (15%)

Query: 2  RQFLVIIAMAMLSN--------IFPFLSIAETNKLPYYTLLDTNTGHVIAEN 45
          ++F+ I+ +  L                 A   +     L++ N+G ++ + 
Sbjct: 12 KRFIAIVTVLTLFFSMFVTFGRAAAETVSAIDVEAGSAILIEANSGKILYQK 63


>gi|219920909|emb|CAQ76632.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 42.7 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 56/204 (27%), Gaps = 4/204 (1%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL +     +  S N     I   L   EK   F + + + +  L  +     
Sbjct: 113 KHLQSGMTLADLSAATLQYSDNTAMNLIIGYLGGPEKVTAFARSIGDATFRLDRTEPTLN 172

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A    +    T       L      +        Q+            +  A       
Sbjct: 173 TAIPGDERDTSTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPESWV 232

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ 237
            G KTG       N +A     + 
Sbjct: 233 VGDKTGAGDYGTTNDIAVIWPENH 256


>gi|218234838|ref|YP_002367214.1| beta-lactamase [Bacillus cereus B4264]
 gi|229178857|ref|ZP_04306217.1| Beta-lactamase [Bacillus cereus 172560W]
 gi|218162795|gb|ACK62787.1| beta-lactamase [Bacillus cereus B4264]
 gi|228604622|gb|EEK62083.1| Beta-lactamase [Bacillus cereus 172560W]
          Length = 312

 Score = 42.7 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTE 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|46277646|gb|AAS87025.1| beta-lactamase ORN-3 [Raoultella ornithinolytica]
          Length = 291

 Score = 42.7 bits (98), Expect = 0.092,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 6/232 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD  +G +++       +   S  K++    V S +   +  L   I   +         
Sbjct: 45  LDLASGQLLSGYCAGERFPMMSTFKVLLCGAVLSRVDTGEEQLDRRIHYRQQDLVEYSPV 104

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +       +T+       I  S N  A  +  +L   +    F++H  + +  L    T 
Sbjct: 105 TEKHLADGLTVGELCAAAITLSDNTAANLLLTTLGGPQGLTTFLRHSGDQTSRLDRWETE 164

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L   +           Q++   ++ K       +     
Sbjct: 165 LNEARPGDVRDTTTPEAMARTLRNLLTGRVLSPASQQQLQRWMVEDKVAGPLLRSALPAG 224

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
                KTG        I+A+     +   ++ + L A     + RNK  A++
Sbjct: 225 WFIADKTGAGNRGSRGIIAALGPDGKAARIVVIYLTATPASMDERNKQIAAI 276


>gi|296118976|ref|ZP_06837549.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968074|gb|EFG81326.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 434

 Score = 42.7 bits (98), Expect = 0.093,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            L+ + +       +++T+TG V+ E+    P  PAS TK+
Sbjct: 70  ALAESPSVPTLGAQVINTSTGEVLWEHDSTTPLIPASSTKV 110


>gi|289583353|ref|YP_003481763.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Natrialba magadii ATCC 43099]
 gi|289532851|gb|ADD07201.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Natrialba magadii ATCC 43099]
          Length = 457

 Score = 42.3 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 28 LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                 D  TG  I    P+ P  PAS TKL+TA   F  
Sbjct: 33 SASVYAADLRTGEPIVAANPNIPLLPASNTKLVTAARAFDE 73


>gi|309798463|ref|ZP_07692760.1| conserved domain protein [Escherichia coli MS 145-7]
 gi|308118027|gb|EFO55289.1| conserved domain protein [Escherichia coli MS 145-7]
          Length = 108

 Score = 42.3 bits (97), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 11/93 (11%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
          F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6  FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53 PASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            S  K++    V S +   +  L   I  S+N
Sbjct: 66 MMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQN 98


>gi|4589729|dbj|BAA76882.1| class A beta-lactamase SFO-1 precursor [Enterobacter cloacae]
 gi|226440723|gb|ACO57221.1| ampA [Enterobacter cloacae]
          Length = 295

 Score = 42.3 bits (97), Expect = 0.095,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 76/280 (27%), Gaps = 26/280 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT------------------LLD-TNTGHV 41
           +RQ  +++A  M          A++                         L+D  +   +
Sbjct: 6   LRQTTLMVATVMPLLFGSAPLWAQSANAKANIQQQLSELEKNSGGRLGVALIDTADNSQI 65

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +     D  +   S +K+M    +    +  K +L   + I ++        +     + 
Sbjct: 66  LY--RGDERFPMCSTSKVMAVSALLKQSEMDKNLLAKRMEIKQSDLVNYNPIAEKHLDTG 123

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MTL       I  S N     I E L    K  ++ + + + +  L  +      A    
Sbjct: 124 MTLAELSAAAIQYSDNTAMNKILEHLGGPAKVTEYARTIGDKTFRLDRTEPTLNTAIPSD 183

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +       L               Q+            +  A        G KTG
Sbjct: 184 KRDTTSPLAMAKSLQTLTLGKALGEPQRAQLVEWMKGNTTGGASIRAGLPATWVVGDKTG 243

Query: 220 FTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSAS 258
                  N +A     +   L+ V      +  +N  +  
Sbjct: 244 SGDYGTTNDIAVIWPANHAPLVLVT--YFTQPQQNAEARK 281


>gi|319939497|ref|ZP_08013857.1| peptidase family S11 [Streptococcus anginosus 1_2_62CV]
 gi|319811483|gb|EFW07778.1| peptidase family S11 [Streptococcus anginosus 1_2_62CV]
          Length = 351

 Score = 42.3 bits (97), Expect = 0.096,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 12/179 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G +        P    S  KL    +V   +++    +T    I+    EY   ++
Sbjct: 119 DLTSGQI-YAMNETQPMTAGSTYKLPLNMLVVDEVEKGNLSMTERFDITHTRYEYIGEHN 177

Query: 95  TFKKGST--MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +       M++    +  ++ S N  A A+AE L   +K +        K  G   T  
Sbjct: 178 NYVAAFNGTMSIPEMQEYSLLYSENTPAYALAERLGGLDKAYT-MYQRYGKGKGEVETI- 235

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                     + TT      +   +     +Y       G     + Y      +  + 
Sbjct: 236 -------NQQNQTTTDYYIQVLDYLWKHQEKYKDLLYYIGESFPNEYYKRYVRDIPIYQ 287


>gi|297587953|ref|ZP_06946597.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Finegoldia magna ATCC 53516]
 gi|297574642|gb|EFH93362.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
           [Finegoldia magna ATCC 53516]
          Length = 312

 Score = 42.3 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 28/256 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN- 85
               +++ D N G  +           ASL+KL       +        L   I +++  
Sbjct: 58  DALAFSVYDMNKGKYLFYEGGGQLPTVASLSKLFAIDYALTK-----VKLDDTIEVNREL 112

Query: 86  -ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-----------CKTEKK 133
                  S+    K    T +  ++ ++V S ND A A+A ++            K    
Sbjct: 113 LELVPEGSSLAHLKVGKYTAEQIMQAMLVPSGNDAAFALAYNIGKKDLGDGYSAKKYVDY 172

Query: 134 FVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG- 192
           FV++++    + G S TH  +  G       T  +D+  ++ ++           +    
Sbjct: 173 FVKNLSKYLADEGYSKTHLFDPSGF-SIQADTNLKDINRVTLKLIDYDFVKKCMGKSSFS 231

Query: 193 --LEIKGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                    + NTN      +        G+KTG T AS +NIV    +  +  +   L 
Sbjct: 232 IKTSQGEFTWENTNEFLDPKSAFYNKDIKGVKTG-TMASSYNIVVLYEKDGEKYLITCLA 290

Query: 246 ALDRNTRNKVSASLLS 261
           +     R K   S ++
Sbjct: 291 SHTNEDRYKAVQSAIN 306


>gi|206971699|ref|ZP_03232649.1| beta-lactamase [Bacillus cereus AH1134]
 gi|206733684|gb|EDZ50856.1| beta-lactamase [Bacillus cereus AH1134]
          Length = 312

 Score = 42.3 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--TLNEVITFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTE 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|223940399|ref|ZP_03632253.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [bacterium Ellin514]
 gi|223890948|gb|EEF57455.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [bacterium Ellin514]
          Length = 514

 Score = 42.3 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 26/93 (27%)

Query: 1  MRQFLV-IIAMAMLSNIFPFLSIAETNK-------------LP------------YYTLL 34
          M+++ V    ++++ ++F F S A+                                 ++
Sbjct: 1  MKKYFVPASCLSLVFSLFVFRSFAQETNRLPETLESLQKRIAKLVTKPQYDAGLFGVKIV 60

Query: 35 DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            +TG  I E+  +   +PAS +KL T  +   
Sbjct: 61 SLDTGKTIYEHDANKLCSPASNSKLYTMAMALD 93


>gi|52142992|ref|YP_083837.1| beta-lactamase [Bacillus cereus E33L]
 gi|51976461|gb|AAU18011.1| beta-lactamase [Bacillus cereus E33L]
          Length = 309

 Score = 42.3 bits (97), Expect = 0.099,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 72  IDTGSNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 128

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 129 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRKMGDRITMSDRLETE 188

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 189 LNEAIPGDIRDTSTAKAVAMNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 248

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 249 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 293


>gi|227538548|ref|ZP_03968597.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
          4) [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241467|gb|EEI91482.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
          4) [Sphingobacterium spiritivorum ATCC 33300]
          Length = 457

 Score = 42.3 bits (97), Expect = 0.100,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          +LD+ TG+VI           AS  K++T+     
Sbjct: 34 VLDSKTGNVIFSKNGQTGLPTASTLKVITSATALD 68


>gi|330470519|ref|YP_004408262.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Verrucosispora maris AB-18-032]
 gi|328813490|gb|AEB47662.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Verrucosispora maris AB-18-032]
          Length = 553

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           + D  TG  + E        PAS+TKL+TA  V +       + TT
Sbjct: 159 VTDALTGQQLFERGGGTGTVPASVTKLLTAVTVLTARGPGYRIPTT 204


>gi|228985589|ref|ZP_04145743.1| Beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|228774166|gb|EEM22578.1| Beta-lactamase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 332

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K + A V+      K   L   IT +K         
Sbjct: 95  IDTGTNQTIAYR-PNERFAFASTYKALAAGVLLQQNSTK--KLDEVITYTKEDLVDYSPV 151

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N             K  +  ++ M +         T 
Sbjct: 152 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFHKIGGPKGYENALRKMGDRVTMSDRFETE 211

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +   +     +               A     
Sbjct: 212 LNEAIPGDIRDTSTAKAIAKNLKDLTVGNALPHQKRNILTDWMKGNATGDKLIRAGVPTD 271

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL   D       
Sbjct: 272 WVVADKSGAGSYGTRNDIAIVWPPNRSPIIIAILSNKDEKGATYD 316


>gi|312184031|gb|ADQ42778.1| beta-lactamase PER-1 [Acinetobacter baumannii]
          Length = 289

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 55  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 114

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 115 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 171

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 172 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 231

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 232 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 279


>gi|300770094|ref|ZP_07079973.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762570|gb|EFK59387.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Sphingobacterium spiritivorum ATCC 33861]
          Length = 457

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          +LD+ TG+VI           AS  K++T+     
Sbjct: 34 VLDSKTGNVIFSKNGQTGLPTASTLKVITSATALD 68


>gi|300810993|gb|ADK35774.1| beta-lactamase Oxa-9 [Klebsiella pneumoniae]
          Length = 111

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 8/108 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--KLPYYTLLDTNTGHVIAENYP-DHPWNPASLT 57
           M++ L++  +  +S   P  S+A      L    + D  TG+ + E        +P S  
Sbjct: 1   MKKILLLHMLVFVSATLPISSVASDEVETLKCTIIADAITGNTLYETGECARRVSPCSSF 60

Query: 58  KLMTAYV-----VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           KL  A +     +    K     L      S     Y        +  
Sbjct: 61  KLPLAIMGFDSGILQSPKSPTWELKPEYNPSPRDRTYKQVYPALWQSD 108


>gi|229588564|ref|YP_002870683.1| putative penicillin-binding exported protein [Pseudomonas
           fluorescens SBW25]
 gi|229360430|emb|CAY47287.1| putative penicillin-binding exported protein [Pseudomonas
           fluorescens SBW25]
          Length = 514

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 2/48 (4%)

Query: 22  IAETNKLPYYTLL--DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
                     +L+  D  +G  + ++ P     PAS  KL+T      
Sbjct: 69  ADPALNGATVSLMVRDARSGSTLYQHNPRTRVIPASNLKLLTTAAAMD 116


>gi|291455914|ref|ZP_06595304.1| putative beta-lactamase [Bifidobacterium breve DSM 20213]
 gi|291382323|gb|EFE89841.1| putative beta-lactamase [Bifidobacterium breve DSM 20213]
          Length = 508

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 63/228 (27%), Gaps = 32/228 (14%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + D  TG    +   D     AS  KL  AY +   ++  +    +              
Sbjct: 309 VYDLKTGKSKIQIDADTAMTSASTYKLFIAYSMIHAVETGQVTWDSA------------- 355

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                            L  +  ++ +A  I  S     + ++     ++          
Sbjct: 356 -----------------LNGMTLSSCMATMIINSDNSCPEAWLARYGFSTVAQQAHDIGA 398

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            N + V  +G  TTA D+A +     ++              ++ + Y     A     G
Sbjct: 399 ANTNFVP-YGMTTTANDLATVLKGFYSNSIASPDSTDQLFSLMETQVYREGIPAGIGSDG 457

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
               K GF      +  A           VI+       +   ++ L+
Sbjct: 458 VVQDKVGFMDGLLHD-AAIVRSDKGDYAMVIMTDGSSWNKIAQASLLI 504


>gi|197296820|gb|ACH58980.1| beta-lactamase [uncultured bacterium BLR1]
          Length = 295

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 70/259 (27%), Gaps = 17/259 (6%)

Query: 2   RQFLVIIAMA-MLSNIFPFLSIAETNKLPYYTL-LDTNTGHVI------------AENYP 47
           R  L+  ++  + S    + +             L+  +G  +             ++  
Sbjct: 8   RTLLLAASVLPLASACTAWSAKGPQQDASAQLAALEAASGSRLGVVGFNTATGARVQHRA 67

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +  +   S  KLM A  V     ++  +L   +  SK         +     + MT+   
Sbjct: 68  EERFPFCSTFKLMLAAAVLERSAKEGDLLARRVNYSKGDLVSYSPITEKNVATGMTVAEL 127

Query: 108 LKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
               +  S N  A  + +          F +   +    L    T    A         T
Sbjct: 128 CAATVQYSDNGAANLLMKILGGPSAVTAFARASGDEVFRLDRWETELNTAIPGDLRDTTT 187

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF-TCAS 224
            A   A +   +  +        Q+K   +          A        G KTG  +  +
Sbjct: 188 PAAMAASVQRLVLGNALGAAQREQLKTWLLGNTTSTQRFLAGVPAGWKVGDKTGSGSYGT 247

Query: 225 GFNIVASAIQGDQSLIAVI 243
             ++          L+  +
Sbjct: 248 TNDVGVLWPPAGAPLVLAV 266


>gi|83591472|ref|YP_425224.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Rhodospirillum
           rubrum ATCC 11170]
 gi|83574386|gb|ABC20937.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Rhodospirillum
           rubrum ATCC 11170]
          Length = 528

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           D  TG  ++ +    P+ PAS++K+ T      
Sbjct: 69  DLQTGRWLSAHNAQEPFLPASVSKVPTTVAALE 101


>gi|294669443|ref|ZP_06734520.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria elongata subsp. glycolytica ATCC 29315]
 gi|291308647|gb|EFE49890.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria elongata subsp. glycolytica ATCC 29315]
          Length = 470

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             + +  TG + A +  D   NPAS  KL+TA+     
Sbjct: 34 AVYVQNLRTGQITAAHRADASVNPASTMKLVTAFAALHA 72


>gi|229030204|ref|ZP_04186262.1| Beta-lactamase [Bacillus cereus AH1271]
 gi|228731094|gb|EEL82018.1| Beta-lactamase [Bacillus cereus AH1271]
          Length = 312

 Score = 42.3 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+      +   L   +T +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQKNSTE--KLNEVVTYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +    G+ MTL    +  +  S N             K  +K ++ + +         T 
Sbjct: 132 TEKHVGTGMTLGAIAEAAVRYSDNTAGNILFHKIGGPKGYEKALRQIGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDNRDTSTAKAMATNLKDFTVGNALPDDKRSILTDWMRGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WIVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|69957073|gb|AAZ04368.1| Bel-1 [Pseudomonas aeruginosa]
 gi|283580173|gb|ADB27941.1| BEL-1 [Pseudomonas aeruginosa]
 gi|283580182|gb|ADB27948.1| BEL-1 [Pseudomonas aeruginosa]
          Length = 283

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 66/216 (30%), Gaps = 5/216 (2%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSNST 95
             G++I     +  +   S  KL  A +V S +   +          S    EY P+   
Sbjct: 44  ENGNLIQGYRANERFAMCSTFKLPLAALVLSRIDAGEENPERKLHYDSAFLEEYAPAAKR 103

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFM 153
           +     MT+  A++  +  S N  A  + + +       K+ + + +    L        
Sbjct: 104 YVATGYMTVTEAIQSALQLSDNAAANLLLKEVGGPPLLTKYFRSLGDKVSRLDRIEPTLN 163

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
                 +    T       +S  I  D   Y    Q++ L I  +    T  A       
Sbjct: 164 TNTPGDERDTTTPMSMAQTVSKLIFGDTLTYKSKGQLRRLLIGNQTGDKTIRAGLPDSWV 223

Query: 214 DGMKTG-FTCASGFNIVASAIQGDQSLI-AVILGAL 247
            G KTG        ++        +  + +V   A 
Sbjct: 224 TGDKTGSCANGGRNDVAFFITTAGKKYVLSVYTNAP 259


>gi|56964459|ref|YP_176190.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
 gi|56910702|dbj|BAD65229.1| D-alanyl-D-alanine carboxypeptidase [Bacillus clausii KSM-K16]
          Length = 489

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 35 DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          D  T  ++ E+  +   +PAS  K++TA    + 
Sbjct: 58 DGATNELLFEHNGNMLLHPASSMKVLTAVAALTE 91


>gi|282900734|ref|ZP_06308676.1| Penicillin-binding protein, transpeptidase [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194534|gb|EFA69489.1| Penicillin-binding protein, transpeptidase [Cylindrospermopsis
           raciborskii CS-505]
          Length = 515

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 77/227 (33%), Gaps = 9/227 (3%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           LS A  N +P   ++D ++G    +   +  ++ AS  K+         +   K  L   
Sbjct: 198 LSAANPNLIPGVFIVDIDSGG-YVDVSGNKNFSAASTIKIPVLVAFLEDVDRGKIRLDEI 256

Query: 80  ITISKNASEYPPSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           +T+ +        N       + +        ++  S N     +   L        + +
Sbjct: 257 LTMEQEMVAGGSGNLRTMPVGTKLKSIEVATKMMTISDNTATNMLISKL-----GGKELL 311

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGK 198
           N   ++ GL  T   +    ++  + T+ +++A L  ++       M    +  L+I  +
Sbjct: 312 NARFRSWGLVNTAIQSPLPDLEGTNTTSPKELASLIAKVNQGELISMRSRDL-MLDIMRR 370

Query: 199 KYPNTNWAVGTFLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
              +     G   GA    KTG       +     +   +  IA I+
Sbjct: 371 TQRDDLLPAGLGEGATAYHKTGDIGTMLADAGLIDVPTGKRYIASIM 417


>gi|170726672|ref|YP_001760698.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella woodyi ATCC 51908]
 gi|169812019|gb|ACA86603.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella woodyi ATCC 51908]
          Length = 481

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 13 LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           SN+   +    ++   Y    +  T  V+ E   D    PAS  KL+TA   
Sbjct: 27 FSNLLSLIKPPHSHTALYA--KNLVTDQVVFEENADTLLLPASTQKLLTAVAA 77


>gi|94502821|gb|ABF29639.1| beta-lactamase [Escherichia coli]
          Length = 220

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 49/190 (25%), Gaps = 12/190 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 24  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 81

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
                TM+L       +  S N     +   +               +   L  T     
Sbjct: 82  KHVNGTMSLAELSAAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLN 141

Query: 156 HGVV-QHGHYTTARDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
             +       T+ R MA             D  +      +KG             A   
Sbjct: 142 TAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLP 197

Query: 210 FLGADGMKTG 219
                G KTG
Sbjct: 198 ASWVVGDKTG 207


>gi|284046612|ref|YP_003396952.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Conexibacter woesei DSM 14684]
 gi|283950833|gb|ADB53577.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Conexibacter woesei DSM 14684]
          Length = 458

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 12 MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          + S +   ++           ++D + G V+ ++  D     AS+TKL T     
Sbjct: 41 LRSTLAAQIAKGP--SAAGAYVVDLSDGRVVFDDRSDRLRLSASVTKLYTTSTAL 93


>gi|94269574|ref|ZP_01291501.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [delta
          proteobacterium MLMS-1]
 gi|93451165|gb|EAT02086.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [delta
          proteobacterium MLMS-1]
          Length = 428

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 39 GHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          G ++A +  D P  PAS  K+ TA +   
Sbjct: 40 GRLLAAHNLDRPLTPASTWKIATALLALE 68


>gi|51245728|ref|YP_065612.1| hypothetical protein DP1876 [Desulfotalea psychrophila LSv54]
 gi|50876765|emb|CAG36605.1| hypothetical protein DP1876 [Desulfotalea psychrophila LSv54]
          Length = 567

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           +   + + D  TG  I +   +  +  AS+ K   A   F  ++  +   
Sbjct: 333 EATGWMVFDLATGESIVDINANRKFQTASMIKPFVALAFFHKVQAGQLTY 382


>gi|254459462|ref|ZP_05072878.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodobacterales bacterium HTCC2083]
 gi|206676051|gb|EDZ40538.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 503

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            S+    +  A+      + + D +TG ++          PAS  K +TA      
Sbjct: 53  ASSSKALIDAAQLGGAVGFAVADLSTGKLLETKNKAIGLPPASTAKAITALYALDA 108


>gi|94313361|ref|YP_586570.1| beta-lactamase class A-like protein [Cupriavidus metallidurans
          CH34]
 gi|93357213|gb|ABF11301.1| Beta-lactamase class A-like protein [Cupriavidus metallidurans
          CH34]
          Length = 293

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 18/64 (28%)

Query: 17 FPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
               +    +      L    G V+ E   +     AS+ KL   + +   + +    L
Sbjct: 24 TALAPLLAGTQARVAISLRLADGKVVLEREAERVQPSASIIKLPILFTLLEQVAQGHLQL 83

Query: 77 TTPI 80
              
Sbjct: 84 EQRF 87


>gi|304408832|ref|ZP_07390453.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS183]
 gi|307302835|ref|ZP_07582590.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica BA175]
 gi|304352653|gb|EFM17050.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS183]
 gi|306913195|gb|EFN43617.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica BA175]
          Length = 502

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 14 SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          S       I+  +       +D ++  VI     +  + PAS  KL+TA    
Sbjct: 38 SLSQAVSKISPRHSQIALLAMDMSSNQVIFSQQAETLFIPASTQKLLTAVSAM 90


>gi|217973250|ref|YP_002358001.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS223]
 gi|217498385|gb|ACK46578.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS223]
          Length = 502

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 14 SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          S       I+  +       +D ++  VI     +  + PAS  KL+TA    
Sbjct: 38 SLSQAVSKISPRHSQIALLAMDMSSNQVIFSQQAETLFIPASTQKLLTAVSAM 90


>gi|18844708|gb|AAL78276.1| K1 beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 79/285 (27%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K+        +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     +   L   EK   F Q + + +  L  +     +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A        G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWVVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 246 NDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 290


>gi|126180036|ref|YP_001048001.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Methanoculleus marisnigri JR1]
 gi|125862830|gb|ABN58019.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Methanoculleus marisnigri JR1]
          Length = 531

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 15/33 (45%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           DT+TG V+     D  + P S TK+ T      
Sbjct: 78  DTSTGEVLLSMNGDRLFTPGSTTKVFTVSTALD 110


>gi|94264598|ref|ZP_01288382.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [delta
          proteobacterium MLMS-1]
 gi|93454952|gb|EAT05189.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [delta
          proteobacterium MLMS-1]
          Length = 428

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 39 GHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          G ++A +  D P  PAS  K+ TA +   
Sbjct: 40 GRLLAAHNLDQPLTPASTWKIATALLALD 68


>gi|163801236|ref|ZP_02195135.1| beta-lactamase [Vibrio sp. AND4]
 gi|159174725|gb|EDP59525.1| beta-lactamase [Vibrio sp. AND4]
          Length = 283

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 3/212 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + DT T     +   D  +   S  K +    + S +  +         + K+       
Sbjct: 41  VWDTQTDER-WDYRGDERFPMMSTFKTLACATMLSNMDNETLDKNATAKVEKHNMVVWSP 99

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSAT 150
                 G T+ +++A +  ++ S N  A  +  S+   +   KF++ + +    L     
Sbjct: 100 VMDRMAGQTIRIEHACEAAMLMSDNTAANIVLRSIDGPQGVTKFLRSIGDKITRLDRFEP 159

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
               A+   +    T    +  L+  +++D   Y    Q+K      K   +   +V   
Sbjct: 160 TLNEANPGDKQDTTTPNAMVNTLNTLLESDALSYESRIQLKIWMQDNKVSDSLIRSVLPK 219

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             +   ++G        I A   + +   I +
Sbjct: 220 GWSIADRSGAGGFGSRGITAMVWKENHRPIYI 251


>gi|160875500|ref|YP_001554816.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS195]
 gi|160861022|gb|ABX49556.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS195]
 gi|315267687|gb|ADT94540.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS678]
          Length = 502

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 14 SNIFPFLSIAETNKLPYYTL-LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          +++   +S           L +D ++  VI     +  + PAS  KL+TA    
Sbjct: 37 TSLSQAVSKISPRHSQIALLTMDMSSNQVIFSQQAETLFIPASTQKLLTAVSAM 90


>gi|83716841|ref|YP_438573.1| beta-lactamase [Burkholderia thailandensis E264]
 gi|167615056|ref|ZP_02383691.1| beta-lactamase precursor [Burkholderia thailandensis Bt4]
 gi|257141632|ref|ZP_05589894.1| beta-lactamase precursor [Burkholderia thailandensis E264]
 gi|83650666|gb|ABC34730.1| beta-lactamase precursor [Burkholderia thailandensis E264]
          Length = 269

 Score = 42.3 bits (97), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 72/272 (26%), Gaps = 18/272 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCSRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   ++        +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDTYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +  A   A      +        +  KN GL  +   ++  +           M      
Sbjct: 115 HLGAQRFARYAKAFDYGNADVSGDPGKNNGLDRSWIGSSLQISPLEQLRFLSKMLNRKLP 174

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYP------NTNWAVGTFLGADGMK--TGFTCASGFNI 228
           +  +                G              A GT   A G     G+       +
Sbjct: 175 VSPNAVDMTERIVEATTLADGTVVHGKTGAAYPLLADGTRDWAHGFGWFVGWITRGNQTL 234

Query: 229 VASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
           V + +  D+    V  G   R    +    LL
Sbjct: 235 VFARLMQDERKQPVSTGIRTREAFLRDLPRLL 266


>gi|302870334|ref|YP_003838971.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micromonospora aurantiaca ATCC 27029]
 gi|302573193|gb|ADL49395.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micromonospora aurantiaca ATCC 27029]
          Length = 588

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + D +TG  +  +  D P  PAS+TKL T   V +  
Sbjct: 202 VADVSTGQALYGSGQDTPTVPASVTKLATGVAVLAAR 238


>gi|159040241|ref|YP_001539494.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Salinispora arenicola CNS-205]
 gi|157919076|gb|ABW00504.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Salinispora arenicola CNS-205]
          Length = 485

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           + D  TG  +     D    PAS+TKL+T   V +      
Sbjct: 99  VTDVVTGATLYGRGADDGTVPASVTKLVTGATVLAARGPGH 139


>gi|15718691|gb|AAC98092.2| extended spectrum beta lactamase [Klebsiella pneumoniae]
          Length = 291

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 65/271 (23%), Gaps = 32/271 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + I   + +      +  +  +                 +D  +G  +     D 
Sbjct: 1   MRYIRLCIISLLATLPLAVHASPQPLEQIKLSESQLSGRVGMIEMDLASGRTLTAWRADE 60

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   IT  +         S       MT+     
Sbjct: 61  RFPMMSTFKVVLCGAVLARVDAGDEQLERKITHRQQDLVDYSPVSEKHLADGMTVGELCA 120

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV--------VQH 161
             I  S N  A  +  +           +     N+        +               
Sbjct: 121 AAITMSDNSAANLLL-ATVGGPAGLTAFLRQIGDNVTRLDRWETDRWETELNEALPGDAR 179

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              T A   A L   + +         Q+    +  +       +V         KTG  
Sbjct: 180 DTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTG-- 237

Query: 222 CASGFNIVASAIQGDQSLIAVILGALDRNTR 252
                     A +     I  +LG  ++  R
Sbjct: 238 ----------AGERGARGIVALLGPNNKAER 258


>gi|60416717|emb|CAI43423.1| beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KSALMAAAVPLLLASGSLWASADAIQQKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K+        +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     +   L   EK   F Q + + +  L  +     +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 246 NDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 290


>gi|95931405|ref|ZP_01314114.1| Peptidoglycan glycosyltransferase [Desulfuromonas acetoxidans DSM
           684]
 gi|95132542|gb|EAT14232.1| Peptidoglycan glycosyltransferase [Desulfuromonas acetoxidans DSM
           684]
          Length = 620

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 37/161 (22%), Gaps = 44/161 (27%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAE------------------------NYPDHPW--- 51
               A   +     +LD N+G ++A                           PDHP    
Sbjct: 253 ATEEAFDEQAGAAVVLDVNSGDILAMVSRPAFDPALFARGISQEEWQALVKNPDHPLQAK 312

Query: 52  ------NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                  P S  K++TA                   ++ +         T          
Sbjct: 313 AISGQYPPGSTYKMVTALAALRAG-----------VVTPDELIDCKGRITLGSRDFRCWK 361

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                    +              + +  ++ M+  ++ LG
Sbjct: 362 KTGHGPTNLNKALRESCDVWFYEISLRLGIERMSTMARELG 402


>gi|194366908|ref|YP_002029518.1| beta-lactamase [Stenotrophomonas maltophilia R551-3]
 gi|194349712|gb|ACF52835.1| Beta-lactamase [Stenotrophomonas maltophilia R551-3]
          Length = 303

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 69/260 (26%), Gaps = 29/260 (11%)

Query: 2   RQFL------VIIAMAMLSNIFPFLSIAETNKLPYYT--------------------LLD 35
           R+FL      V  ++A+                                        LLD
Sbjct: 5   RRFLQFSGAAVASSLALPLLARATGKATANVPAEAAITAATDFAALEKACAGRLGVTLLD 64

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
           T +G  I  +  D  +   S  K + A  V S  + + A+L T + +           + 
Sbjct: 65  TASGRRI-GHRQDERFPMCSTFKSVLAATVLSQAERRPALLDTRVPVRDADLLSHAPVTR 123

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              G  MT+ +  +  I+ S N  A  +            F++   +             
Sbjct: 124 RHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDALSRSDRLEPELN 183

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +          T A   A L   +  +  Q     Q+    I  +       A       
Sbjct: 184 SFAKDDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGKRWR 243

Query: 214 DGMKTGFTCASGFNIVASAI 233
            G KTG       N +    
Sbjct: 244 VGDKTGSNGEDARNDIGVLW 263


>gi|23264040|gb|AAL78161.1| class A beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 80/285 (28%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+T +                 L++  +    +     D
Sbjct: 8   KSALMAAAVPLLLASGSLWASADTLQQKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K+        +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F Q + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFAQSIGDVTFRLDRMEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGGGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 246 NDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 290


>gi|74474880|dbj|BAE44428.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 290

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 66/250 (26%), Gaps = 23/250 (9%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYT--------------------LLDTNTGHVIAEN 45
           V  ++A+                                        LLDT +G  I  +
Sbjct: 4   VASSLALPLLAHATGKATANVPAEAAITAATDFAALEKACAGRLGVTLLDTASGRRI-GH 62

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S  K + A  V S  + + A+L T + +           +    G  MT+ 
Sbjct: 63  RQDERFPMCSTFKSVLAATVLSQAERRPALLDTRVPVRDADLLSHAPVTRRHAGKDMTVR 122

Query: 106 NALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +  +  I+ S N  A  +            F++   +             +         
Sbjct: 123 DLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDALSRSDRLEPELNSFAKGDPRDT 182

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            T A   A L   +  +  Q     Q+    I  +       A        G KTG    
Sbjct: 183 TTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGKRWRVGDKTGSNGE 242

Query: 224 SGFNIVASAI 233
              N +A   
Sbjct: 243 DARNDIAVLW 252


>gi|257142784|ref|ZP_05591046.1| class A beta-lactamase precursor [Burkholderia thailandensis E264]
          Length = 289

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 83/276 (30%), Gaps = 22/276 (7%)

Query: 1   MRQFLVIIAMA--MLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAE 44
           MR+ L+I A++  ++    P    A                     +  LDT TG  I  
Sbjct: 1   MRRSLLIAAVSAPLVGACAPLRDNARNVAAEQQLRELESTFDGRLGFVALDTATGARI-A 59

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           +  D  +   S  K M +  V +      A+L   I  +K         +    G+ MT+
Sbjct: 60  HRADERFPFCSTFKTMLSAAVLARSAGDAALLQRRIPYAKRDLVRYSPITEKHVGAGMTV 119

Query: 105 DNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
                  +  S N  A  +       +    + + + + +  L    T    A    +  
Sbjct: 120 AELCAATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRRETELNTAIPGDERD 179

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             T A   A +   +  D        Q+    +  K       A          KTG   
Sbjct: 180 TTTPAAMAASVRRLLVGDALGTAQRAQLNAWMLGNKTGDARIRAGVPAGWRVADKTGTGD 239

Query: 223 ASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSA 257
               N +  A   D+  ++ V+       +RN  + 
Sbjct: 240 YGTGNDIGVAYPPDRAPIVFVV--YTTMRSRNAQAR 273


>gi|269925719|ref|YP_003322342.1| beta-lactamase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789379|gb|ACZ41520.1| beta-lactamase [Thermobaculum terrenum ATCC BAA-798]
          Length = 274

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 61/222 (27%), Gaps = 13/222 (5%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-YPPSN 93
           D   G  +     D  +N AS+ K+     +F  + E    L   + +            
Sbjct: 23  DLTQGRELF-INADETFNTASVIKVPIMIELFRRVYEDNVSLDDRLILEDRFRTGGSGIL 81

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHF 152
             F+ G  +TL +    +I  S N     + +        + +  +   +  L       
Sbjct: 82  KEFRSGLQLTLWDLCVAMIALSDNVATNMLIDYLGIDAINRCMDSLGAHNTRLHRMVGFK 141

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA--VGTF 210
                  +    TT RDM ++  ++           +     +  +   N         +
Sbjct: 142 SIKPDQPKGLGRTTPRDMMMIFQKLAEGNVISESASEEMIAILAKQHDRNMIPRLLPIDY 201

Query: 211 LGADG--------MKTGFTCASGFNIVASAIQGDQSLIAVIL 244
               G         KTG       ++        +  +  IL
Sbjct: 202 DSVSGDYDSAIVANKTGAVDGVRNDVALIRFADGRQWVICIL 243


>gi|60416703|emb|CAI43416.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416705|emb|CAI43417.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416707|emb|CAI43418.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416711|emb|CAI43420.1| beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 78/285 (27%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKHSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K         +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKADLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F Q + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFAQSIGDVTFRLDRMEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 246 NDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 290


>gi|116491089|ref|YP_810633.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
 gi|116091814|gb|ABJ56968.1| D-alanyl-D-alanine carboxypeptidase [Oenococcus oeni PSU-1]
          Length = 249

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 75/206 (36%), Gaps = 7/206 (3%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
                  + N G +I++      +  + L++L+  Y V S ++ KK  L TP+ +S+  S
Sbjct: 8   AQSSLFAELN-GKIISKKNVRKTFPISDLSRLVLIYEVLSAIRSKKISLDTPLIVSEKIS 66

Query: 88  EYPPSN----STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            +   +      F+ G   T+  A+++L++ S    A  + E +    +K+        K
Sbjct: 67  LFSKKDRSAAMHFQIGEFFTVKQAIEILLIMSEKSAAYLLIEKIFGNLEKWRSETARFLK 126

Query: 144 NLGLSA--THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
              +       +         +  +A  +  +  ++  DFP+ +   Q K    +  +  
Sbjct: 127 QEKIDGLIYEPVGLMSGEGRENLLSAISILKVINKLVNDFPKILAMTQKKQFIFQSDRQV 186

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFN 227
                       + ++     A  + 
Sbjct: 187 QFYRNPSFKQRINNLQISAFFAEKYQ 212


>gi|1524368|emb|CAA63714.1| extended-spectrum beta-lactamase [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|124248221|emb|CAL64954.1| PER-2 beta-lactamase [Citrobacter freundii]
          Length = 308

 Score = 42.3 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 71/225 (31%), Gaps = 17/225 (7%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   +T+++ A      +   K        
Sbjct: 62  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQSVTVNRAAVLQNTWSPMMKDHQGDEFT 121

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----- 160
            A++ L+  S +       + L +      Q ++   ++LG+     +     +      
Sbjct: 122 VAVQQLLQYSVSHSDNVACDLLFELV-GGPQALHAYIQSLGVKEAAVVANEAQMHADDQV 180

Query: 161 -HGHYTTARDMAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
            + ++T+ +  A +  + +             +    +      + K        V    
Sbjct: 181 QYQNWTSMKAAAQVLQKFEQKKQLSETSQALLWKWMVETTTGPQRLKGLLPAGTIVAHKT 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT-RNKV 255
           G  G++ G T A+        +   + L+  +       + R   
Sbjct: 241 GTSGVRAGKTAATNDA-GVIMLPDGRPLLVAVFVKDSAESERTNE 284


>gi|254474823|ref|ZP_05088209.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Ruegeria sp. R11]
 gi|214029066|gb|EEB69901.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Ruegeria sp. R11]
          Length = 494

 Score = 41.9 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          + D  TG  +       P  PAS+ K +TA     
Sbjct: 63 VADAKTGLRLEAEGAQTPLPPASVAKALTALYALD 97


>gi|291008570|ref|ZP_06566543.1| beta-lactamase precursor [Saccharopolyspora erythraea NRRL 2338]
          Length = 270

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 63/225 (28%), Gaps = 4/225 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++  TG  + ++  D  +   S  K   A  + +            I  ++         
Sbjct: 31  VNVRTGREL-KHRADERFAMCSTFKTYAAGALLAAHPLAGGYFDKVIRYTRADLRPNSPV 89

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +  +  + MT+    +  I +S N     +            F + + + +  L      
Sbjct: 90  TETRVDTGMTVAELCEAAITRSDNAAGNLLLAELGGPAAIAPFARSIGDPTTRLDRWEVE 149

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A    +    T A   A     +  D        Q+K   I          A     
Sbjct: 150 LNTAIPGDERDTTTPAGIAAGYRAMVVGDALGAPEREQLKKWLIANTTGGERIRAGLPPN 209

Query: 212 GADGMKTGF-TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              G KTG     +  ++  +  +   +++  IL +     R   
Sbjct: 210 WVTGDKTGSGDYGTANDVAVTWTESGDAIVIAILTSKSAPDRKYD 254


>gi|134097960|ref|YP_001103621.1| beta-lactamase precursor [Saccharopolyspora erythraea NRRL 2338]
 gi|133910583|emb|CAM00696.1| beta-lactamase precursor [Saccharopolyspora erythraea NRRL 2338]
          Length = 307

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 63/225 (28%), Gaps = 4/225 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++  TG  + ++  D  +   S  K   A  + +            I  ++         
Sbjct: 68  VNVRTGREL-KHRADERFAMCSTFKTYAAGALLAAHPLAGGYFDKVIRYTRADLRPNSPV 126

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +  +  + MT+    +  I +S N     +            F + + + +  L      
Sbjct: 127 TETRVDTGMTVAELCEAAITRSDNAAGNLLLAELGGPAAIAPFARSIGDPTTRLDRWEVE 186

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A    +    T A   A     +  D        Q+K   I          A     
Sbjct: 187 LNTAIPGDERDTTTPAGIAAGYRAMVVGDALGAPEREQLKKWLIANTTGGERIRAGLPPN 246

Query: 212 GADGMKTGF-TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
              G KTG     +  ++  +  +   +++  IL +     R   
Sbjct: 247 WVTGDKTGSGDYGTANDVAVTWTESGDAIVIAILTSKSAPDRKYD 291


>gi|46309216|emb|CAG25831.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 263

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 63/234 (26%), Gaps = 6/234 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            Y  +D  +G ++A       +   S  K++    V + +      L   I   +     
Sbjct: 29  GYVEMDLASGRMLAAWRASERFPLMSTFKVLLCGAVLARVDAGDEQLDRRIHYRQQDLVD 88

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGL 147
               S       MT+       I  S N     + +          F++ + +    L  
Sbjct: 89  YSPVSEKHLADGMTVGELCAAAITMSDNSAGNLLLKSVGGPAGLTTFLRQIGDNVTRLDR 148

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
             T    A         T A     L   + T         Q+    +  +       AV
Sbjct: 149 WETELNEALPGDVRDTTTPASMATTLRKLLTTPSLSARSQQQLLQWMVDDQVAGPLIRAV 208

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQ--SLIAVILG--ALDRNTRNKVSA 257
                    KTG        IVA      +   ++ + L   A     RN+  A
Sbjct: 209 LPAGWFIADKTGAGERGSRGIVALLGPDGKAERIVVIYLRDTAATMAERNQQIA 262


>gi|78214775|gb|ABB36576.1| carbenicillinase [Morganella morganii]
          Length = 288

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 13/140 (9%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL+  ++ + S +F              +I  +        +LDT  G    +   +  
Sbjct: 2   KFLLAFSLLIPSVVFASTSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGE-YWDYNGNQR 60

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    T + I K            + G  +TLD+A   
Sbjct: 61  FPKTSTFKTIACAKLLYDAEQGKVNPNTTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 120

Query: 111 LIVKSANDIAVAIAESLCKT 130
            +  S N  A  I  ++C  
Sbjct: 121 TMTTSDNTAANIILSAVCGP 140


>gi|543895|sp|P35392|BLAC_STRFR RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|153187|gb|AAA26709.1| beta-lactamase precursor (gtg start codon) (EC 3.5.2.6)
           [Streptomyces fradiae]
          Length = 306

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 54/218 (24%), Gaps = 7/218 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                DT TG  +A    D  +  AS+ K +    V   L     +L   +  + +  + 
Sbjct: 58  GAFAYDTGTGRTVAYR-ADERFPIASMFKTIAVAAVLRDLDRDGEVLARRVHYTADYVKR 116

Query: 90  PPSNSTFKKGST----MTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSK 143
              +            MT+    +  + +S N  A  +           +F + + +   
Sbjct: 117 SGYSPVTGLPENVANGMTVAELCEATLTRSDNTAANLLLRDLGGPTAVTRFCRSVGDHVT 176

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            L        +A         +           I  D        ++    +  +     
Sbjct: 177 RLDRWEPELNSAEPGRVTDTTSPRAIGRTYGRLILGDLLAAHDRERLTRWMLDNRTSDER 236

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                        KTG       N    A    +  + 
Sbjct: 237 FRKGLPADWLLADKTGGGDYGTNNDAGVAWPPGRPPVV 274


>gi|228958767|ref|ZP_04120479.1| Beta-lactamase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228800906|gb|EEM47811.1| Beta-lactamase [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 312

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 58/221 (26%), Gaps = 6/221 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I     +  +  AS  K + A V+          L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRSNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNT 251
              G K+G       N +A     ++  +I  IL + D   
Sbjct: 252 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKE 292


>gi|229173190|ref|ZP_04300739.1| Beta-lactamase [Bacillus cereus MM3]
 gi|228610274|gb|EEK67547.1| Beta-lactamase [Bacillus cereus MM3]
          Length = 312

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+      +   L   IT +K         
Sbjct: 75  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSTE--KLNEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         + G             A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAHKRNILTGWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WIVADKSGAGSYGTRNDIAIVCPPNRAPIIIAILSSKDEKEATYD 296


>gi|315301013|ref|ZP_07872340.1| beta-lactamase,putative [Listeria ivanovii FSL F6-596]
 gi|313630617|gb|EFR98423.1| beta-lactamase,putative [Listeria ivanovii FSL F6-596]
          Length = 259

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/235 (11%), Positives = 59/235 (25%), Gaps = 14/235 (5%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
           E        + D     ++     +  +  AS+ KL      F  + + +  L T I +S
Sbjct: 12  EMIDSKALYISDEK--QMLFAENENQLYTAASVIKLPIYLYFFEKISKGELDLQTEIQLS 69

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
            ++                      +L  +            +    E   +Q +     
Sbjct: 70  SDSVVAGAGIIQILPQK-----RTWRLEELLHLMIAISDNTATNQLIELASLQELQAWLG 124

Query: 144 NLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
             G   +  +    +     G       +A+  ++   +  +               +  
Sbjct: 125 KKGWEKSVRIERKMMDFKSAGENKITAKLAVTIFQEMMELTKKYPNLTETIRRPFLNQQH 184

Query: 202 NTNWAVGTFL-GADG----MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
            +N        G  G     KTG       ++     QG+   +A +        
Sbjct: 185 RSNLTGTLEEAGIAGLQMLNKTGELKDIQHDVAIFEYQGEIRFVAALTNNTGLEA 239


>gi|254787003|ref|YP_003074432.1| peptidoglycan synthetase FtsI [Teredinibacter turnerae T7901]
 gi|237686982|gb|ACR14246.1| peptidoglycan synthetase FtsI [Teredinibacter turnerae T7901]
          Length = 554

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 22/89 (24%), Gaps = 24/89 (26%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPAS 55
                  +  K     ++D  TG V+A        P+                  + P S
Sbjct: 221 LASAVKKQGAKSGSVVVMDVKTGEVLAMANQPAYNPNDRSSIKPAQLRNRALTDVFEPGS 280

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K +T        K     L   I  S 
Sbjct: 281 TVKPLTMMAALESGKYH---LNDTINTSP 306


>gi|312862915|ref|ZP_07723155.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
 gi|311101775|gb|EFQ59978.1| conserved hypothetical protein [Streptococcus vestibularis F0396]
          Length = 80

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 22 IAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
            ET +     L+D NTG ++ ++  D   +PAS
Sbjct: 38 ATETYRPKSSLLIDANTGDILWQDNIDEVRDPAS 71


>gi|220910129|ref|YP_002485440.1| beta-lactamase [Cyanothece sp. PCC 7425]
 gi|219866740|gb|ACL47079.1| beta-lactamase [Cyanothece sp. PCC 7425]
          Length = 442

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 11/213 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPS 92
           LD + G+   +   D  +  AS+ KL      F  +   K  L   +T+           
Sbjct: 203 LDMDNGN-YVDLNGDKIFPAASIIKLPILVAFFQAVDAGKVRLDEKLTLRPELFASGSGE 261

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
               +  +  +       +I+ S N     I + L          +N   ++ GL     
Sbjct: 262 MQFQRPWTQFSAQYTAAQMIIISDNTATNLILKRL-----GGPGVLNQQFRSWGLKQ--T 314

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN-WAVGTFL 211
           +  + +       T     +++     D  + +     +      ++  N    A G   
Sbjct: 315 VIRNWLPDLSGTNTTTARELVNLLTLLDQGKLLTPSSREKALAILRQTKNRKLLAAGLGP 374

Query: 212 G-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           G     KTG       +     +   +  +A +
Sbjct: 375 GAVFAHKTGDIGFMLGDAGMIQMPTGKRYMAAV 407


>gi|304383450|ref|ZP_07365913.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella marshii DSM 16973]
 gi|304335414|gb|EFM01681.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella marshii DSM 16973]
          Length = 440

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 12/36 (33%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            + D     V+          PAS  K++TA     
Sbjct: 98  MVYDLTADSVLYRRNERQLLRPASTMKIVTAVAALD 133


>gi|311745219|ref|ZP_07719004.1| beta-lactamase [Algoriphagus sp. PR1]
 gi|126577743|gb|EAZ81963.1| beta-lactamase [Algoriphagus sp. PR1]
          Length = 360

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 23/101 (22%)

Query: 1   MRQFLV-IIAMAMLS--------NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYP---- 47
           M++    I+ + ++          +   L+ AE        L+    G V+ E       
Sbjct: 1   MKKLFTPILFLCLVIHPILGQERILKDALANAEKEDFSGVILV-AQNGKVLFEKAIGMRS 59

Query: 48  ---------DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                       +  AS++K  TA ++    ++        
Sbjct: 60  FEDQIPLKKHDVFEMASVSKQFTAMMIMLCQEKGLLDYDDR 100


>gi|91776627|ref|YP_546383.1| peptidoglycan synthetase FtsI [Methylobacillus flagellatus KT]
 gi|91710614|gb|ABE50542.1| peptidoglycan synthetase FtsI [Methylobacillus flagellatus KT]
          Length = 583

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 22/84 (26%), Gaps = 21/84 (25%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPAS 55
                     K     +LD  TG V+A        P++P                + P S
Sbjct: 243 LAAAVTEHKAKAGSAVVLDAKTGEVLAMVNVPSYNPNNPVNLAGGRSRNRAIVDTFEPGS 302

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTP 79
             K  TA       + K   L   
Sbjct: 303 TLKPFTAAAALDSGQYKPNTLIDT 326


>gi|20090817|ref|NP_616892.1| serine-type D-Ala-D-Ala carboxypeptidase [Methanosarcina
           acetivorans C2A]
 gi|19915883|gb|AAM05372.1| serine-type D-Ala-D-Ala carboxypeptidase [Methanosarcina
           acetivorans C2A]
          Length = 568

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 32  TLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            L+ D  TG V+ +  P+  + P S TKL T      
Sbjct: 96  ILVEDLETGEVVYQLNPEKMFIPGSTTKLYTGAAALD 132


>gi|247720643|gb|ACT09140.1| BEL-3 [Pseudomonas aeruginosa]
          Length = 283

 Score = 41.9 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 5/216 (2%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSNST 95
             G++I     +  +   S  KL  A +V S +   +          S    EY P+   
Sbjct: 44  ENGNLIQGYRANERFAMCSTFKLPLAALVLSRIDAGEENPERKLHYDSAFLEEYAPAAKR 103

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFM 153
           +     MT+  A++  +  S N  A  + + +       K+ + + +    L    +   
Sbjct: 104 YVATGYMTVTEAIQSALQLSDNAAANLLLKEVGGPPLLTKYFRSLGDKVSRLDRIESTLN 163

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
                 +    T       +S  I  D   Y    Q++ L I  +    T  A       
Sbjct: 164 TNTPGDERDTTTPMSMAQTVSKLIFGDTLTYKSKGQLRRLLIGNQTGDKTIRAGLPDSWV 223

Query: 214 DGMKTG-FTCASGFNIVASAIQGDQSLI-AVILGAL 247
            G KTG        ++        +  + +V   A 
Sbjct: 224 TGDKTGSCANGGRNDVAFFITTAGKKYVLSVYTNAP 259


>gi|160888097|ref|ZP_02069100.1| hypothetical protein BACUNI_00505 [Bacteroides uniformis ATCC
          8492]
 gi|156862408|gb|EDO55839.1| hypothetical protein BACUNI_00505 [Bacteroides uniformis ATCC
          8492]
          Length = 479

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          + D   G  +     D    PAS  KL+T     
Sbjct: 51 VYDLTAGKPLYGYQADKLSRPASTMKLLTTITAL 84


>gi|317478124|ref|ZP_07937299.1| D-Ala-D-Ala carboxypeptidase 3 family protein [Bacteroides sp.
          4_1_36]
 gi|316905722|gb|EFV27501.1| D-Ala-D-Ala carboxypeptidase 3 family protein [Bacteroides sp.
          4_1_36]
          Length = 479

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          + D   G  +     D    PAS  KL+T     
Sbjct: 51 VYDLTAGKPLYGYQADKLSRPASTMKLLTTITAL 84


>gi|221229301|gb|ABO61005.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 301

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K +    V S     +  L T + I+         
Sbjct: 59  VLNTGNGRRIGGHRQDERFPMCSTFKSLLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 118

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 119 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRYDRNEP 178

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 179 DVNLFVKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGT 238

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 239 RWRVGDKTGSNGDDTRNDIAVLW 261


>gi|107123297|gb|ABF83597.1| extended-spectrum beta-lactamase PER-1 [Acinetobacter baumannii]
          Length = 287

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 56  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 115

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 116 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 172

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 173 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 232

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 233 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 280


>gi|134133931|gb|ABO61023.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 298

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 50/188 (26%), Gaps = 2/188 (1%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  +   S  K M A  V S  +   A+L   + + +         +    G  MT+ + 
Sbjct: 71  DERFPMCSTFKSMLAATVLSQAERAPALLDRRVPVREADLLSHAPVTRRHAGKDMTVRDL 130

Query: 108 LKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
            +  I+ S N  A  +            F++   +             +          T
Sbjct: 131 CRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDAVSRSDRLEPETNSFAEGDPRDTTT 190

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
            A     L   +     Q     Q+    I  +       A        G KTG      
Sbjct: 191 PAAMAGSLQRVVLGKALQPASRQQLADWLIDNETGDACLRAGLGKRWRVGDKTGSNGEDA 250

Query: 226 FNIVASAI 233
            N +A   
Sbjct: 251 RNDIAVLW 258


>gi|270159229|ref|ZP_06187885.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Legionella longbeachae D-4968]
 gi|289165945|ref|YP_003456083.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Legionella longbeachae NSW150]
 gi|269987568|gb|EEZ93823.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Legionella longbeachae D-4968]
 gi|288859118|emb|CBJ13047.1| putative D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Legionella longbeachae NSW150]
          Length = 596

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 10/69 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHP 50
          M++ L+      LS++     I                    ++D  +G  +        
Sbjct: 1  MKKTLISAFFVTLSSVSQSARIQNEVDKLINQINPNVNLGAVVVDLTSGETLYRRNAGRL 60

Query: 51 WNPASLTKL 59
          + PAS  KL
Sbjct: 61 YIPASNMKL 69


>gi|238493221|ref|XP_002377847.1| esterase, putative [Aspergillus flavus NRRL3357]
 gi|220696341|gb|EED52683.1| esterase, putative [Aspergillus flavus NRRL3357]
          Length = 417

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 17/146 (11%)

Query: 32  TLLDTNTGHVIAEN----------YP-----DHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             +D ++G +I                    D  +  AS+TKL+TA  V   ++     L
Sbjct: 25  IAID-SSGKIIYHRAAGKASLDDENAPALQTDSLYWIASMTKLVTAIAVMQLVERGIVSL 83

Query: 77  T-TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                TI     +            + +  N L L  V+    +   +  +         
Sbjct: 84  DEDVRTIVPEVRDIQILEDIRNDKDSSSESNQLHLKPVQGKITLRNLMCHTAGFVYDSSS 143

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQH 161
             +   SK+ G +A  F  +     H
Sbjct: 144 PLLQKWSKSHGRTAYTFCGSMAGYHH 169


>gi|309810906|ref|ZP_07704707.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Dermacoccus sp. Ellin185]
 gi|308435212|gb|EFP59043.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Dermacoccus sp. Ellin185]
          Length = 465

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 28  LPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            P    + D +TG V+ E+       PAS+TKL +A+ +
Sbjct: 90  SPTAVTVRDASTGTVLYEHDSSKATTPASVTKLASAFAI 128


>gi|227510567|ref|ZP_03940616.1| beta-lactamase class A [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190219|gb|EEI70286.1| beta-lactamase class A [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 250

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 55/217 (25%), Gaps = 14/217 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             +  +  ASL KL     V          L   I + ++               T  L 
Sbjct: 35  NANKAFRSASLIKLAILNDVLDS----HFDLDKEIHVRRDKLVGGAGVLQLLSERTFQLK 90

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L L+I  S N     +   +       ++H+N     +G   T               
Sbjct: 91  DLLALMISVSDNSATNLVIAHI------GMEHVNQYLSKMGFYKTRLNRYLMDTSALESG 144

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCAS 224
                     +   +     H         +  +Y        T  G     KTG     
Sbjct: 145 KDNYTTPAESQRLLEMAITNHPMTKTWFLNQQFRYKLPGDFDETGNGIQVYNKTGEGYQI 204

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             ++          LI++ L      +R   +  L +
Sbjct: 205 DHDVAEFVY--GNKLISIALLTFGSRSRMN-TIRLFN 238


>gi|229103106|ref|ZP_04233793.1| Beta-lactamase [Bacillus cereus Rock3-28]
 gi|228680295|gb|EEL34485.1| Beta-lactamase [Bacillus cereus Rock3-28]
          Length = 312

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I+  + +  +  AS  K + A V+          L   I  +K         
Sbjct: 75  IDTGTNQTISYRH-NERFAFASTYKALAAGVLLQQNSID--TLNEVIKFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N             K  +K ++ + +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFHKIGGPKGYEKALRQIGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T     + L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIASNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I VIL + D       
Sbjct: 252 WIVGDKSGAGSYGTRNDIAIVWPPNRAPIIIVILSSKDEKEATYD 296


>gi|254521974|ref|ZP_05134029.1| beta-lactamase [Stenotrophomonas sp. SKA14]
 gi|219719565|gb|EED38090.1| beta-lactamase [Stenotrophomonas sp. SKA14]
          Length = 530

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 32/100 (32%), Gaps = 22/100 (22%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTN-----------TGHVIAEN----- 45
           R+ L + A+A+        +   +       ++               G V+  +     
Sbjct: 11  RRGLCMAALAVFPAATAQPADTASLDADVAAVVRAEHLPGLAMAVVENGQVVYRHAEGKR 70

Query: 46  ------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                   D  +  AS +K MTA ++   +++ +     P
Sbjct: 71  GDGGRLDEDTLFKIASNSKAMTAALLARLVQQGRLRWDDP 110


>gi|170738611|ref|YP_001767266.1| peptidoglycan glycosyltransferase [Methylobacterium sp. 4-46]
 gi|168192885|gb|ACA14832.1| Peptidoglycan glycosyltransferase [Methylobacterium sp. 4-46]
          Length = 600

 Score = 41.9 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 33/135 (24%), Gaps = 25/135 (18%)

Query: 26  NKLPYYTLLDTNTGHVIA--------------ENYPDH-------PWNPASLTKLMTAYV 64
            K     +LD NTG V+A                 PD         +   S  K MT  +
Sbjct: 257 AKAAAAMILDVNTGEVLALASLPDFDPNEPADALNPDRINRMNVGVYEMGSTFKAMTLAM 316

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                K            ++            +   T  +    ++    S    A    
Sbjct: 317 ALESGKFTVNSTFD----TRGGVLSWGRQKIHEYHGTNRVITMPEVFTHSSNIGSAKMAL 372

Query: 125 ESLCKTEKKFVQHMN 139
                  K F++ M 
Sbjct: 373 GVGVPGHKAFLKKMG 387


>gi|270295124|ref|ZP_06201325.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. D20]
 gi|270274371|gb|EFA20232.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. D20]
          Length = 479

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          + D   G  +     D    PAS  KL+T     
Sbjct: 51 VYDLTAGKPLYGYQADKLSRPASTMKLLTTITAL 84


>gi|332186616|ref|ZP_08388359.1| beta-lactamase family protein [Sphingomonas sp. S17]
 gi|332013268|gb|EGI55330.1| beta-lactamase family protein [Sphingomonas sp. S17]
          Length = 297

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 55/222 (24%), Gaps = 9/222 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              +LDT +G        D  +   S  KL  A +        +  L   +  S+     
Sbjct: 45  GAFVLDTGSGRS-FGWRADERFCHCSTFKLSLAAMALREADAGRLDLMETLAFSRADIVA 103

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                            AL   +  ++++ A  +            +        +    
Sbjct: 104 YSPIVEENLDKGKLPILALAQAVQITSDNAAANVLMHRLGGPAALTRFWREIGDAVSRLD 163

Query: 150 THFMNAHGVV--QHGHYTTARDM-AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
            +    + +      + TT R M   +   +  D  +     +++      +       A
Sbjct: 164 GYEPAINVIPPGTQENSTTPRAMAETVRRIVLGDVLRPASRDRLRSWMAATQSGSKRIRA 223

Query: 207 VGTFLGADGMKTGF-----TCASGFNIVASAIQGDQSLIAVI 243
                     KTG            ++        +S + V 
Sbjct: 224 GLPADWHGFDKTGTGMRPGIGNKTNDLAVLMPPKGRSPLVVT 265


>gi|197124253|ref|YP_002136204.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Anaeromyxobacter sp. K]
 gi|196174102|gb|ACG75075.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Anaeromyxobacter sp. K]
          Length = 755

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  NIFPFLSIAETNKLPYYTLLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +   +  +         L+   +TG V+    PD   NPAS  KL+T+    
Sbjct: 64  ALAAIVDGSPLAGARVGILVSAIDTGEVVYARDPDVLLNPASNVKLVTSAAAL 116


>gi|221229331|gb|ABO61019.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K M A    S  +   A+L   + + +        
Sbjct: 62  LLDTASGRRI-GHRQDERFPMCSTFKSMLAATTLSQAERMPALLDRRVPVGEADLLSHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +T         
Sbjct: 121 VTRRHAGVDMTVRDLCRATIITSGNTAANLLFGVVGGPPAVTAFLRASGDTVSRSDRLEP 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 181 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 240

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 241 RWRVGDKTGSNGEDARNDIAVLW 263


>gi|260911268|ref|ZP_05917869.1| D-alanyl-D-alanine carboxypeptidase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634641|gb|EEX52730.1| D-alanyl-D-alanine carboxypeptidase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 428

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/255 (10%), Positives = 57/255 (22%), Gaps = 20/255 (7%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYP 90
            + D +    I          PAS  K++TA      L       T      S       
Sbjct: 87  MVYDLDADSAIYRFNEYQTMRPASTMKVITAIAALDKLGGSHQFKTELCYTGSIENRTLT 146

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +             + +   +          I  +L   +      +            
Sbjct: 147 GNVYCVGGFDPRFNADDMHAFVESLQKMGVDTIRGTLYADKSMKTTDILGKGWCWDDDNP 206

Query: 151 ------HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                 +      + +         + + ++      PQ       +   +         
Sbjct: 207 VLSALVYTRKDVFMDRFMQELRKAGIVLDAFTATGQRPQDATCICTRFHTMDQILMRMMK 266

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA---------VILGALDRNTRNKV 255
            +   +  A   +      +      +A Q  + LI+          +      +  N V
Sbjct: 267 ESDNLYAEAMFYQIAAATGNKPATAKNAAQVVKRLISKLGLNAAAYNVADGSGLSLYNYV 326

Query: 256 SASL----LSMGFYN 266
           SA L    L   F N
Sbjct: 327 SAELEVAMLRYAFRN 341


>gi|167565646|ref|ZP_02358562.1| class A beta-lactamase [Burkholderia oklahomensis EO147]
          Length = 295

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 67/229 (29%), Gaps = 7/229 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
             LDT TG  I  +  D  +   S  K M +  + +       +L   I  +K       
Sbjct: 54  VALDTATGARI-AHRADERFPFCSTFKTMLSAAILARSAGDATLLQRRIPYAKRDLVSYS 112

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSA 149
             +    G  MT+       +  S N  A  +       +    + + + +T+  L    
Sbjct: 113 PVTEKHVGDGMTVAELCAAALQYSDNTAANLLIALLGGPQAVTAYARSIGDTTFRLDRRE 172

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T    A    +    T A   A L   +  D        Q+    +          A   
Sbjct: 173 TELNTAIPGDERDTTTPAAMAASLRRLLVGDALGAAQRAQLDTWMLGNTTGAARIRAGVP 232

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI----LGALDRNTRNK 254
                  KTG       N +  A   +++ I ++    +   +   RN 
Sbjct: 233 ADWRVADKTGTGDYGTGNDIGVAYPPNRAPIVIVIYTTMRDKNAQARND 281


>gi|115031|sp|P00809|BLAC_BACCE RecName: Full=Beta-lactamase 1; AltName: Full=Beta-lactamase I;
           AltName: Full=Penicillinase; Flags: Precursor
 gi|39434|emb|CAA25753.1| type 1 penicillinase [Bacillus cereus]
          Length = 306

 Score = 41.9 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 59/220 (26%), Gaps = 5/220 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I    P+  +  AS  K + A V+          L   IT +K         
Sbjct: 71  IDTGTNQTI-SYRPNERFAFASTYKALAAGVLLQQNSID--SLNEVITYTKEDLVDYSPV 127

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N     +       K  +K ++HM +         T 
Sbjct: 128 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFNKIGGPKGYEKALRHMGDRITMSNRFETE 187

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 188 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGIPTD 247

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
              G K+G       N +A     + + I V++ + D   
Sbjct: 248 WVVGDKSGAGSYGTRNDIAVVWPPNSAPIIVLISSKDEKE 287


>gi|108757859|ref|YP_631333.1| putative D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Myxococcus xanthus DK 1622]
 gi|108461739|gb|ABF86924.1| putative D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Myxococcus xanthus DK 1622]
          Length = 494

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 21/86 (24%)

Query: 1  MRQFLVIIAMAMLSNIFP----------------FLSIAETNKLP----YYTLLDTNTGH 40
          MR+ L    + +   +                    ++ ET +         ++D  TG 
Sbjct: 1  MRRILSASLLLVAPLVLSGCFRETRPEGDTLPSLARALFETLEAEGALASAYVVDAQTGE 60

Query: 41 VIAENYPDHPWNPASLTKLM-TAYVV 65
           +  +       PAS  K++ TA V+
Sbjct: 61 PLFTHREHVRLLPASTLKVVSTASVL 86


>gi|325292312|ref|YP_004278176.1| Beta-lactamase class D [Agrobacterium sp. H13-3]
 gi|325060165|gb|ADY63856.1| Beta-lactamase class D [Agrobacterium sp. H13-3]
          Length = 273

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 6/103 (5%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKL-PYYTLLDTNTGHVIAENYP-DHPWNPASLTKLMTAY 63
           ++++   L  I P  + A+ ++      +    TG VI +    D    PAS  K+  A 
Sbjct: 8   IVLSCIALQGILPLSASAQQSQAFECTLVTSIETGAVINQQGACDQRVAPASTFKVPLAL 67

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           + +        +L                    K       + 
Sbjct: 68  IGYDAG----ILLDDKTPAWDWKPGTEARAQDRKTVDPTIWEQ 106


>gi|107123342|gb|ABF83599.1| extended-spectrum beta-lactamase PER-1 [Acinetobacter baumannii]
          Length = 269

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 39  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 98

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 99  VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 155

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 156 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 215

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 216 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 263


>gi|319783888|ref|YP_004143364.1| beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169776|gb|ADV13314.1| Beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 275

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 13/78 (16%)

Query: 1  MRQF--LVIIAMAMLSNIFPFLSIAETNKLPYY--------TLLDTNTGHVIAENYP-DH 49
          MR F  L  I   +L  +   L      +             + D  +G  + ++   D 
Sbjct: 1  MRNFDRLPFIFAGILFLLAWLLGFP--LRAQSAPLGDLQCTVIADAASGKTLYQDGVCDQ 58

Query: 50 PWNPASLTKLMTAYVVFS 67
           ++PAS  K+  + + + 
Sbjct: 59 RFSPASTFKVPLSLIGYD 76


>gi|297251583|gb|ADI25068.1| oxacillinase OXA-114d [Achromobacter xylosoxidans]
          Length = 275

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/243 (8%), Positives = 54/243 (22%), Gaps = 11/243 (4%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD----HPWNPASLT 57
           R+    +  A+  +      +          + D   G ++ +          + P S  
Sbjct: 4   RRLSCALGAALSLSALGGGPVQAAVLCT--VVADAADGRILFQQGTQQACAERYTPGSTF 61

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           KL  A +       +                   +       +     + +    + +  
Sbjct: 62  KLAIALMGADAGILQGPHEPVWNYQPAYPDWGGDAWRQPTDPARWIKYSVVWYSQLTAKA 121

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRI 177
                                    K+ G      +++  +         R +      +
Sbjct: 122 LGQDRFQRYTSAFGYGNADVSGEPGKHNGTDGAWIISSLRISPLEQLAFLRKLVNRQLPV 181

Query: 178 KTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           K    +        G     + Y           G++G+ T          V  A +  +
Sbjct: 182 KAAAYELAENLFEAGQADGWRLYG---KTGTGSPGSNGVYTAANAYGW--FVGWARKDGR 236

Query: 238 SLI 240
            L+
Sbjct: 237 QLV 239


>gi|168705626|ref|ZP_02737903.1| beta-lactamase [Gemmata obscuriglobus UQM 2246]
          Length = 296

 Score = 41.9 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 84/300 (28%), Gaps = 42/300 (14%)

Query: 3   QFLVIIAMAMLSNIFPFLSIAETNKLP------------YYTLLDTNTGHVIAENYPDHP 50
           ++L ++ + +L    P  + A   +                 +    TG        D P
Sbjct: 8   RYLALVCLGLL----PPHASAADLESRITPLVKEHKGKVAVAVKHLKTGEEFY-LNADEP 62

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITI--SKNASEYPPSNSTFKKGSTMTLDNAL 108
              ASL KL      +   KE K     P+T+               F +G+   L +A+
Sbjct: 63  MPTASLIKLPIMVEAYWQAKEDKIKFDKPVTLAKGDKVPGSGILTPHFSEGAAFPLKDAI 122

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH----- 163
           +L+IV S N     + + +                 LGL  T         +        
Sbjct: 123 RLMIVYSDNTATNMVIDQIGLP------ATGERMAQLGLKNTKVNAKVFKPETRLSQEFG 176

Query: 164 ------YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
                  TTA++   L   I           +     +K                    K
Sbjct: 177 KKYGLGSTTAKEAVRLLELIDAGKVVSPEACKEMLGHLKACDDKEKLVRFLPAGTVVAHK 236

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA------SLLSMGFYNKTDRK 271
           +G   AS  +      +G    + V+  A +       +A       +    F +  ++K
Sbjct: 237 SGSVDASKTDAGIIYTKGGPIAVCVLTDANEDKRWAADNAGQVLIGKVAKEVFDHFAEKK 296


>gi|269929220|ref|YP_003321541.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
 gi|269788577|gb|ACZ40719.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
          Length = 434

 Score = 41.5 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 1/118 (0%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +          ++    G  + E  PD  +  ASL KL     ++   +         I
Sbjct: 101 PLVAEVPAEIGIVVALPDGTRLYEYQPDRLFEAASLYKLGIMVELYRQREAGWISFDETI 160

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           T+     E  P    F+   T    + L   ++ +++++A + A       +     M
Sbjct: 161 TLLPGYYEEGPDVYGFEAIGTAVPIDDLLWAMIAASSNVA-SHALLDRIGNEAVNATM 217


>gi|284030979|ref|YP_003380910.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Kribbella flavida DSM 17836]
 gi|283810272|gb|ADB32111.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Kribbella flavida DSM 17836]
          Length = 528

 Score = 41.5 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            + D  TG  + +        PAS TKL ++     
Sbjct: 66  LVRDATTGETLYDRNGGTRLLPASNTKLFSSAAAME 101


>gi|146276537|ref|YP_001166696.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacter sphaeroides ATCC 17025]
 gi|145554778|gb|ABP69391.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacter sphaeroides ATCC 17025]
          Length = 485

 Score = 41.5 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 11/30 (36%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          TG ++          PAS  K +TA     
Sbjct: 65 TGELLEARNAALRLPPASTAKAITALYALE 94


>gi|186475929|ref|YP_001857399.1| beta-lactamase [Burkholderia phymatum STM815]
 gi|184192388|gb|ACC70353.1| Beta-lactamase [Burkholderia phymatum STM815]
          Length = 300

 Score = 41.5 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 72/233 (30%), Gaps = 8/233 (3%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
             L DT  G  +        +   S  K + A  V     + K  L   I  +K+A    
Sbjct: 59  AIL-DTANGQ-LQGWRARERFPMCSTFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVAN 116

Query: 91  PSNSTFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGL 147
              S  + G   MT+    +  + +S N  A  + ES+        F + + +    L  
Sbjct: 117 SPVSGPRAGGDGMTVSELCEAALTRSDNTAANLLLESIGGPPALTVFARGIGDGVTRLDR 176

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
           +      A         T A  +A +   +  +         +    +  K       A 
Sbjct: 177 NEPTLNEAIEGDPRDTTTPAAMIADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAG 236

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQS--LIAVIL-GALDRNTRNKVSA 257
                  G KTG       N +A      +   L+AV L GA   +   + +A
Sbjct: 237 LPPDWRVGDKTGTGERGTSNDIAIVWPAGRPPVLVAVYLTGATQTSAAQRDAA 289


>gi|15077505|gb|AAK83220.1|AF338038_3 class A beta-lactamase [Rahnella aquatilis]
 gi|308390287|gb|ADO32587.1| class A beta-lactamase RAHN-1 [Rahnella sp. 9-Pear]
          Length = 295

 Score = 41.5 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 69/245 (28%), Gaps = 12/245 (4%)

Query: 30  YYTLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
              L+D  +   +      D  +   S +K M A  +    + KK +LT  + + ++   
Sbjct: 53  GVMLIDTADNSQI--AYRADERFAMCSTSKFMAASAILKESEVKKNLLTQHVALKQSDLV 110

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLG 146
                +       MT+       +  S N     + E L    K   + + + + +  L 
Sbjct: 111 NYNPITEKHLNDGMTIGELAAAALQYSDNAAMNKLIEHLGGPHKVTDYARTLGDKTFRLD 170

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
            +      A         +       L               Q+            +  A
Sbjct: 171 RTEPTLNTAIPGDDRDTTSPRAMALSLQHATLGSALAEPQRAQLVEWMKGNTTGAMSIRA 230

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASL 259
                   G KTG       N +A     ++  L+ V         A  R      +A +
Sbjct: 231 GLPATWVVGDKTGSGDYGTTNDIAVIWPENKAPLVLVTYFTQPEKDAKSRRDVLASAAKI 290

Query: 260 LSMGF 264
           ++ G+
Sbjct: 291 VTQGY 295


>gi|330469075|ref|YP_004406818.1| beta-lactamase [Verrucosispora maris AB-18-032]
 gi|328812046|gb|AEB46218.1| beta-lactamase [Verrucosispora maris AB-18-032]
          Length = 439

 Score = 41.5 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK MTA ++       +  L  P
Sbjct: 50 DADLQFRIGSITKTMTAVLIMQERDAGRLALDDP 83


>gi|317157030|ref|XP_001826179.2| esterase [Aspergillus oryzae RIB40]
          Length = 417

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 17/146 (11%)

Query: 32  TLLDTNTGHVIAEN----------YP-----DHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             +D ++G +I                    D  +  AS+TKL+TA  V   ++     L
Sbjct: 25  IAID-SSGKIIYHRAAGKASLDDENAPALQTDSLYWIASMTKLVTAIAVMQLVERGIVSL 83

Query: 77  T-TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFV 135
                TI     +            + +  N L L  V+    +   +  +         
Sbjct: 84  DEDVRTIVPELRDIQILEDIRNDKDSSSESNQLHLKPVQGKITLRNLMCHTAGFVYDSSS 143

Query: 136 QHMNNTSKNLGLSATHFMNAHGVVQH 161
             +   SK+ G +A  F  +     H
Sbjct: 144 PLLQKWSKSHGRTAYTFCGSMAGYHH 169


>gi|315221834|ref|ZP_07863746.1| conserved domain protein [Streptococcus anginosus F0211]
 gi|315189067|gb|EFU22770.1| conserved domain protein [Streptococcus anginosus F0211]
          Length = 337

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 12/179 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G +        P    S  KL    +V   +++    +T    I+    EY   ++
Sbjct: 105 DLTSGQI-YAMNETQPMTAGSTYKLPLNMLVVDEVEKGNLSMTERFDITHTRYEYIGEHN 163

Query: 95  TFKKGST--MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +       M++    +  ++ S N  A A+AE L   +K +          +       
Sbjct: 164 NYVAAFNGTMSIPEMQEYSLLYSENTPAYALAERLGGLDKAYT---------MYQHYGKG 214

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                 +   + TT      +   +     +Y       G     + Y      +  + 
Sbjct: 215 KGDVETINQQNQTTTDYYIQVLDYLWKHQEKYKDLLYYIGESFPNEYYKRYVRDIPIYQ 273


>gi|303232588|ref|ZP_07319274.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae
           PB189-T1-4]
 gi|302481375|gb|EFL44449.1| serine-type D-Ala-D-Ala carboxypeptidase [Atopobium vaginae
           PB189-T1-4]
          Length = 276

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 75/255 (29%), Gaps = 26/255 (10%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
               +++ D +    +           ASL+KL             +  L      ++  
Sbjct: 22  DALAFSVYDMDANSYVYYEGAGQLPTVASLSKLFAIDYAL-----SRVKLDDVFEANEET 76

Query: 87  SE--YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
            +     S+       T T    ++ ++V S ND A  +A ++ K +            +
Sbjct: 77  LKLVPAGSSLANLTRGTYTAKQIMQAMLVPSGNDAAYVMAYNIGKMDLGAGHSAKEYINH 136

Query: 145 L-----------GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
                       G S T   +  G              +    +  DF +         +
Sbjct: 137 FVKSLSTYLAREGYSKTDLFDPSGFSTQASTNLDDTNRVTLKLLDYDFVKECMGESSFTI 196

Query: 194 EIKGKKYPNTN------WAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
             K   +   N           + G   G+KTG T AS +NI+A      +  +   L A
Sbjct: 197 TTKQGNFTWKNTSEFLDKESLFYNGHIKGVKTG-TMASSYNIIALYENDGRRYLITCLAA 255

Query: 247 LDRNTRNKVSASLLS 261
                R +   + ++
Sbjct: 256 HSNKDRYQAVQAAIN 270


>gi|13399766|pdb|1G6A|A Chain A, Pse-4 Carbenicillinase, R234k Mutant
          Length = 271

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 3/212 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LDT  G    +   +  +   S  K +    +    ++ K    + + I K        
Sbjct: 27  VLDTQNGE-YWDYNGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSP 85

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSAT 150
               + G  +TLD+A    +  S N  A  I  ++   K    F++ + +    L     
Sbjct: 86  VIEKQVGQAITLDDACFATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEP 145

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T     + L+  +       M+  +++   +  +   N   +V   
Sbjct: 146 DLNEGKLGDLRDTTTPKAIASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPA 205

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                 K+G       +I A      Q+ I V
Sbjct: 206 GWNIADKSGAGGFGARSITAVVWSEHQAPIIV 237


>gi|291163433|gb|ADD80743.1| extended-spectrum beta-lactamase PER-6 [Aeromonas
           allosaccharophila]
 gi|301030423|gb|ADK47973.1| extended-spectrum beta-lactamase PER-6 [Aeromonas media]
 gi|316994934|gb|ADU79018.1| extended-spectrum beta-lactamase PER-6 [Aeromonas veronii]
 gi|316994937|gb|ADU79020.1| extended-spectrum beta-lactamase PER-6 [Aeromonas
           allosaccharophila]
          Length = 308

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 70/225 (31%), Gaps = 17/225 (7%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ K+  A +V   + + K  L   + +++ A      +   K        
Sbjct: 62  NPFEKFPMQSVFKMHLAMLVLHQVDQGKLDLNKTVAVNRAAVLQNTWSPMMKDHQGDEFT 121

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ----- 160
             ++ L+  S +       + L +        ++   ++LG+  T  +     +      
Sbjct: 122 VTVQQLLQYSVSHSDNVACDLLFELV-GGPAALHAYIQSLGIKETEVVANEAQMHADDQV 180

Query: 161 -HGHYTTARDMAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
            + ++T+ +  A L  + +             +    +      + K        V    
Sbjct: 181 QYKNWTSMKAAAQLLRKFEQKKQLSETSQALLWKWMVETTTGPQRLKGLLPAGTVVAHKT 240

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKV 255
           G  G++ G T A+  +I    +   + L+  +         R   
Sbjct: 241 GTSGVRAGKTAATN-DIGVIMLPDGRPLLVAVFVKDSAESARTNE 284


>gi|118587704|ref|ZP_01545114.1| Beta-lactamase class A [Stappia aggregata IAM 12614]
 gi|118439326|gb|EAV45957.1| Beta-lactamase class A [Stappia aggregata IAM 12614]
          Length = 298

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 77/276 (27%), Gaps = 23/276 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETN------------KLPY-------YTLLDTNTGHVI 42
           R+  + +++A+ + +      A                            +LD+ TG   
Sbjct: 6   RRNALTLSLALFATVPSISGSALAAGFDPAPLEKTVQDAESRLSARIGVAVLDSETGKT- 64

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS-T 101
             +  D  +   S  K      +    ++ +      + I K         +  K GS  
Sbjct: 65  FTHRADERFPLNSTFKAFLCAALLEKGEQGEVQPDRRVKIRKEDLVSYSPVTEKKVGSGG 124

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           MT        I  S N  A  + E++   +    +++ + +T   L  +           
Sbjct: 125 MTYLELCDAAITISDNAAANLVLEAVGGPQGLTDYLRGIGDTITRLDRTEPALNEGQAGD 184

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
                T A  +A L   +  D        Q+ G  +  +    T  A          KTG
Sbjct: 185 SRDTTTPAAAVATLQKLVLGDALSPSARDQLTGWLLDNQVGKATLRAGLPEEWPVADKTG 244

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                  N +      D+  + + +     +     
Sbjct: 245 AGGNGSRNNIGVIWPDDRQPVVIAVYITQTDASFDD 280


>gi|149913664|ref|ZP_01902197.1| penicillin-binding protein 2 [Roseobacter sp. AzwK-3b]
 gi|149812784|gb|EDM72613.1| penicillin-binding protein 2 [Roseobacter sp. AzwK-3b]
          Length = 647

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 32/146 (21%), Gaps = 37/146 (25%)

Query: 27  KLPYYTLLDTNTGHVIAE------------------------NYPDHPW---------NP 53
           +     ++D  TG V+A                         +    P           P
Sbjct: 266 ESAAAVVMDCETGDVLASASAPSFDPNLFVRGISVADYQALLDNKYRPLPNKAVQGMYPP 325

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++TA        + +  L   +       E         K S     +    L+ 
Sbjct: 326 GSTFKMVTALAALE---DGQVDLNETVYC-PGHLEVSGRRFHCWKRSGHGNMDMHGSLVE 381

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMN 139
                       +  +      + + 
Sbjct: 382 SCDVYYYDVALRTGIEKISAMARRLG 407


>gi|116871557|ref|YP_848338.1| beta-lactamase,putative [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740435|emb|CAK19555.1| beta-lactamase,putative [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 262

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 70/227 (30%), Gaps = 16/227 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-S 83
           T       + D N   V+     +  +  AS+ KL      F  + + +  L T + I +
Sbjct: 15  TIDTKALYITDEN--KVLFAENENQLFTAASVIKLPIYLYFFEKIAKNELDLQTKMQIPT 72

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           +             + ST TL+  L L+I  S N     +       E   +Q + +   
Sbjct: 73  EKIVAGAGIIKILPQKSTWTLEELLHLMIAISDNTATNQLI------ELATMQKLQSWIS 126

Query: 144 NLGLSATHFMNAHGVV---QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
               +    +    +       +  +A+    +  +I      Y    +     +  +++
Sbjct: 127 ENHWNDGIQLERKMMDFTTTKQNKISAKAAVNILRKIIELGELYPDLKETIRRPLYNQQF 186

Query: 201 PNTNWAVGTFLGADG----MKTGFTCASGFNIVASAIQGDQSLIAVI 243
            +         G  G     KTG       ++     +G+    A +
Sbjct: 187 RSNIAGTLEEAGIPGLQMLNKTGELKDIQHDVAFFEYKGNTRFAATL 233


>gi|255657148|ref|ZP_05402557.1| putative penicillin-binding protein [Clostridium difficile
           QCD-23m63]
 gi|296452014|ref|ZP_06893729.1| beta-lactamase [Clostridium difficile NAP08]
 gi|296879591|ref|ZP_06903570.1| beta-lactamase [Clostridium difficile NAP07]
 gi|296259205|gb|EFH06085.1| beta-lactamase [Clostridium difficile NAP08]
 gi|296429394|gb|EFH15262.1| beta-lactamase [Clostridium difficile NAP07]
          Length = 340

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/219 (10%), Positives = 55/219 (25%), Gaps = 14/219 (6%)

Query: 36  TNTGHVIAEN-----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
              G V+ E        D  ++ AS+TK + + ++   + +          +        
Sbjct: 46  ARKGKVVFEKYYNGYNADDTFHVASVTKSIISALIGIAIDKGYIKDVDQKVVDFFPEYTC 105

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
             +   KK  T+     +           ++          K  +  +    + +G    
Sbjct: 106 SPSEICKKAVTIRHLLTMTAPYPFKNMTESLERLCKQKDWIKYTLNQLGQKGE-IGTFKY 164

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                H +      TT +     +                   +   + +   N      
Sbjct: 165 SSAGTHLLSAIITKTTGKSAREFANEYLFKPIGMKIIPDYDMKDFGFEDFFGKNLKGWAK 224

Query: 211 L--GADGMKTGFTCASGFNIVASA------IQGDQSLIA 241
              G      G T ++   +          I  ++ +I+
Sbjct: 225 DRQGYSTGGWGLTLSARDMLRFGFLYLNDGIWNNKRIIS 263


>gi|302510158|ref|XP_003017039.1| hypothetical protein ARB_05333 [Arthroderma benhamiae CBS 112371]
 gi|291180609|gb|EFE36394.1| hypothetical protein ARB_05333 [Arthroderma benhamiae CBS 112371]
          Length = 2838

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 16/82 (19%)

Query: 12   MLSNIFPFLSIAETNKLPYYT--LLDTNTGHVIAENYP-------------DHPWNPASL 56
            M S                Y   +++ + G  +  +               D  +  AS+
Sbjct: 2602 MFSTYLKQAVSGPKPVAHSYVCSVINKD-GDQLYSHAEGSISQHSSERAGFDSVYWMASM 2660

Query: 57   TKLMTAYVVFSFLKEKKAMLTT 78
            TKLMTA  V   ++  +  L  
Sbjct: 2661 TKLMTAIAVMLCVERGQISLDE 2682


>gi|157375428|ref|YP_001474028.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella sediminis
          HAW-EB3]
 gi|157317802|gb|ABV36900.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella sediminis
          HAW-EB3]
          Length = 485

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 18/67 (26%), Gaps = 9/67 (13%)

Query: 1  MRQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPW 51
          M++    + +  LS                I   +        D     VI E   D   
Sbjct: 1  MKKLTSALLLYWLSTSTACADEYFSNILSLIKPPHSHTSVIATDLVNDSVIYEENADILL 60

Query: 52 NPASLTK 58
           PAS  K
Sbjct: 61 LPASTQK 67


>gi|305680597|ref|ZP_07403405.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium matruchotii ATCC 14266]
 gi|305660128|gb|EFM49627.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium matruchotii ATCC 14266]
          Length = 420

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           D  TG+V+    P  P  PAS TK++T     
Sbjct: 81  DVTTGNVVLAKNPQLPLLPASSTKVLTVSAAL 112


>gi|225022108|ref|ZP_03711300.1| hypothetical protein CORMATOL_02141 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945041|gb|EEG26250.1| hypothetical protein CORMATOL_02141 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 420

 Score = 41.5 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           D  TG+V+    P  P  PAS TK++T     
Sbjct: 81  DVTTGNVVLAKNPQLPLLPASSTKVLTVSAAL 112


>gi|315022278|gb|EFT35306.1| D-alanyl-D-alanine carboxypeptidase [Riemerella anatipestifer
          RA-YM]
          Length = 473

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           + D  +  +I+      P  PAS TKL+T
Sbjct: 67 VVYDPKSKQIISSYNEATPLVPASTTKLLT 96


>gi|307153887|ref|YP_003889271.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           7822]
 gi|306984115|gb|ADN15996.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           7822]
          Length = 305

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              G V+  +  D  + PAS TK+ T+     
Sbjct: 99  LTDGTVLYSHNADKFFIPASNTKIFTSAAALQ 130


>gi|188990552|ref|YP_001902562.1| Beta-lactamase [Xanthomonas campestris pv. campestris str. B100]
 gi|167732312|emb|CAP50504.1| Beta-lactamase [Xanthomonas campestris pv. campestris]
          Length = 296

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 8/231 (3%)

Query: 33  LLDTNTG-HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           LLD+ +G  +      +  +   S  K + A  V   + + +  LT  I I  +      
Sbjct: 55  LLDSGSGWRI--GQRENERFPMCSTFKFVLAAAVLQRVDKGELRLTQQIKIRASDMLEHA 112

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSA 149
             +    G ++++    +  ++ S N  A  +           +F++ + +T        
Sbjct: 113 PVTERHVGGSLSVAELCQATMIHSDNPAANLLFPLIGNPPGLTRFLRGIGDTKTRSDRLE 172

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                          T A   A L   +  D  Q     Q+    I  +   +   A   
Sbjct: 173 PEMNGFAPGEPCDTTTPAAMAATLRTLLLGDALQPASRKQLTAWMIDNRTGDDCLRAGLP 232

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKVSA 257
                G KTG       N +A      ++   L+   L     +   + +A
Sbjct: 233 RDWKIGDKTGSNGTDTRNDIAIIWPPGRTAPLLLTAYLNGATVDAAGRDAA 283


>gi|322506442|gb|ADX01896.1| Extended-spectrum beta-lactamase PER-1 precursor [Acinetobacter
           baumannii 1656-2]
          Length = 293

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 47  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 106

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 107 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 163

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 164 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 223

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 224 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 271


>gi|24373941|ref|NP_717984.1| penicillin-binding protein 4 [Shewanella oneidensis MR-1]
 gi|24348376|gb|AAN55428.1|AE015680_3 penicillin-binding protein 4 [Shewanella oneidensis MR-1]
          Length = 507

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 16/92 (17%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNK-----------LPY----YTLL-DTNTGHVIAENYPD 48
           L++  +A         + A   K            P       L  D +    +     D
Sbjct: 16  LLLTVVATALFPSNVWAAAADIKHTTLDQQMSDIAPSHSQIALLAHDMSNDKQLYSQQAD 75

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             + PAS  K++TA    + L  + + +T   
Sbjct: 76  TLFIPASTQKVLTAVTALAALGPEFSYVTDLW 107


>gi|325336594|gb|ADZ12868.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Riemerella
           anatipestifer RA-GD]
          Length = 484

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
            + D  +  +I+      P  PAS TKL+T
Sbjct: 78  VVYDPKSKQIISSYNEATPLVPASTTKLLT 107


>gi|107123318|gb|ABF83598.1| extended-spectrum beta-lactamase PER-1 [Acinetobacter baumannii]
          Length = 266

 Score = 41.5 bits (95), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 39  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 98

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 99  VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 155

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 156 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 215

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 216 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 263


>gi|288927385|ref|ZP_06421232.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330219|gb|EFC68803.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella sp. oral taxon 317 str. F0108]
          Length = 427

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/278 (8%), Positives = 59/278 (21%), Gaps = 22/278 (7%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYP 90
            + D +    I          PAS  K++TA      L       T      +       
Sbjct: 86  MVYDLDADSAIYCFNERQTMRPASTMKVITAITALDKLGGSHQFKTELCYTGTIENRTLT 145

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +             + +   +          I  +L   +      +            
Sbjct: 146 GNVYCVGGMDPRFNTDDMHAFVESLQKMGVDTIRGTLYADKSMKTTDLLGKGWCWDDDNP 205

Query: 151 ------HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                 +      + +         + + ++      PQ       +   +         
Sbjct: 206 VLSALVYARKDVFMDRFMQELRKAGIVLDAFTATGQRPQDATCICTRFHTMDQVLMRMMK 265

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA------- 257
            +   +  A   +      +      +A Q  + LIA  LG      +    +       
Sbjct: 266 ESDNLYAEAMFYQIAAATGNKPATAKNAAQVVKRLIA-KLGLNAAAYKVADGSGLSLYNY 324

Query: 258 -------SLLSMGFYNKTDRKKINYIIKDFYQQNLSNE 288
                  ++L   F N      ++  +           
Sbjct: 325 VSAELEVAMLRYAFRNANIYLHLSPSLPIAGIDGTLKS 362


>gi|167578082|ref|ZP_02370956.1| class A beta-lactamase precursor [Burkholderia thailandensis TXDOH]
          Length = 289

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 83/276 (30%), Gaps = 22/276 (7%)

Query: 1   MRQFLVIIAMA--MLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAE 44
           MR+ L+I A++  ++    P    +                     +  LDT TG  I  
Sbjct: 1   MRRSLLIAAVSAPLVGACAPLRDNSRNVAAEQQLRELESTFDGRLGFVALDTATGARI-A 59

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           +  D  +   S  K M +  V +      A+L   I  +K         +    G+ MT+
Sbjct: 60  HRADERFPFCSTFKTMLSAAVLARSAGDAALLQRRIPYAKRDLVRYSPITEKHVGAGMTV 119

Query: 105 DNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
                  +  S N  A  +       +    + + + + +  L    T    A    +  
Sbjct: 120 AELCAATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRRETELNTAIPGDERD 179

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             T A   A +   +  D        Q+    +  K       A          KTG   
Sbjct: 180 TTTPAAMAASVRRLLVGDALDTAQRAQLNAWMLGNKTGDARIRAGVPAGWRVADKTGTGD 239

Query: 223 ASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSA 257
               N +  A   D+  ++ V+       +RN  + 
Sbjct: 240 YGTGNDIGVAYPPDRAPIVFVV--YTTMRSRNAQAR 273


>gi|126650730|ref|ZP_01722946.1| Beta-lactamase [Bacillus sp. B14905]
 gi|126592395|gb|EAZ86413.1| Beta-lactamase [Bacillus sp. B14905]
          Length = 261

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 2/196 (1%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + D  T   +  +  +  ++ AS+ K+     V ++  +    L + +TI+        
Sbjct: 19  FVKDPKTDQFLFSHQLEESFSSASIIKVPILLAVLAYTGKHNISLHSALTITPTDWVDFS 78

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S  +   +   +  + ++I        V I          + + +     +L      
Sbjct: 79  VISEQRLTQSTVYELLVWMIITSDNTATNVLIDVVGMGFLNDYFRQIGLQETSLQRKMMD 138

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                      ++T+A+DMA L  RI         Y ++    +  ++            
Sbjct: 139 VERLAM--GIDNFTSAQDMAHLFTRIYQKDLLASPYNELVIDILSRQRVYEGLKRYLVDD 196

Query: 212 GADGMKTGFTCASGFN 227
                KTG       +
Sbjct: 197 VKLAHKTGGFDTVDHD 212


>gi|239630640|ref|ZP_04673671.1| beta-lactamase class A [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526923|gb|EEQ65924.1| beta-lactamase class A [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 255

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 7/216 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
            +  L+  +T HV+     D P+  ASL KL  A  V     +  + L     ++   S 
Sbjct: 14  KHALLV-ADTRHVLFGAQVDQPFPAASLIKLGIAAFVKEKAADDPSQL--ERQVTLPESV 70

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                  F       + + L L++  S N    A+  +           +      + L 
Sbjct: 71  GGAGILRFMSPQAWRVRDLLTLMLTVSDNLATNALLTTYGL--PTIAAWLTRHYPGVQLR 128

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                +          + A  +         + P      Q    +    K       + 
Sbjct: 129 RPLMQSTFDGDNMITASAAWQLLRALLMSDGNEPAADICAQALRHQQNRTKLL-LAPTME 187

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            F+G    KTG       +    A    + L AV+L
Sbjct: 188 NFIGWLAGKTGELPHCEHDAACFAA-EGERLYAVVL 222


>gi|301067794|ref|YP_003789817.1| beta-lactamase class A [Lactobacillus casei str. Zhang]
 gi|300440201|gb|ADK19967.1| Beta-lactamase class A [Lactobacillus casei str. Zhang]
          Length = 261

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 7/216 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
            +  L+  +T HV+     D P+  ASL KL  A  V     +  + L     ++   S 
Sbjct: 20  KHALLV-ADTRHVLFGAQVDQPFPAASLIKLGIAAFVKEKAADDPSQL--ERQVTLPESV 76

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                  F       + + L L++  S N    A+  +           +      + L 
Sbjct: 77  GGAGILRFMSPQAWRVRDLLTLMLTVSDNLATNALLTTYGL--PTIAAWLTRHYPGVQLR 134

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                +          + A  +         + P      Q    +    K       + 
Sbjct: 135 RPLMQSTFDGDNMITASAAWQLLRALLMSDGNEPAADICAQALRHQQNRTKLL-LAPTME 193

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            F+G    KTG       +    A    + L AV+L
Sbjct: 194 NFIGWLAGKTGELPHCEHDAACFAA-EGERLYAVVL 228


>gi|289581651|ref|YP_003480117.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Natrialba magadii ATCC 43099]
 gi|289531204|gb|ADD05555.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Natrialba magadii ATCC 43099]
          Length = 508

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
                   D  TG VIA++  + P  PAS  KL+T    F  
Sbjct: 74  AAISVFARDIETGDVIADSGSERPVQPASTAKLLTTAAAFDE 115


>gi|62511921|gb|AAX54687.2| PER-1 beta-lactamase [Pseudomonas aeruginosa]
          Length = 256

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 18  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 77

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 78  VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 134

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 135 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 194

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 195 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 242


>gi|297159325|gb|ADI09037.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces bingchenggensis BCW-1]
          Length = 498

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           K    +++D+ TG  +     D    PAS+ KL T     S 
Sbjct: 111 KPRSVSVVDSATGRQLYGAQADTQAVPASIIKLATGIAALSA 152


>gi|254520163|ref|ZP_05132219.1| predicted protein [Clostridium sp. 7_2_43FAA]
 gi|226913912|gb|EEH99113.1| predicted protein [Clostridium sp. 7_2_43FAA]
          Length = 298

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/317 (10%), Positives = 85/317 (26%), Gaps = 53/317 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE-----TNKLPYYTLLDTNTGHV---------IAEN- 45
           M++  +++ + ++ +        E      +     +++D     +         I    
Sbjct: 1   MKKVYILLIVVLILSFQGCAQKEEVKEIEKSNAKTNSIIDKKVDEIAGDYKDNMSIYYKS 60

Query: 46  ---------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF 96
                     PD  +  AS TK+    ++   + E    L     I     +    +   
Sbjct: 61  LNTDDEYILNPDKYYIAASTTKIPLCMMILDQVFEGAISLEDT--IYYEKLDSEGGSGVL 118

Query: 97  KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT--HFMN 154
                +      + + +                      ++M +    + L+        
Sbjct: 119 YYLQEIPNITVEEAIYLSIVES-------------DNITKNMLHRISKISLTDYLRDITE 165

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
              +  + +Y TAR +  +  R+  +     + +  K +E   +   +            
Sbjct: 166 DDSIP-YENYITARQLYKVLERLYENPDN--NPYYEKLIEYMKETVFHDRLDKYLPYDIV 222

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVIL----GALDRNTR---NKVSASLLSMGFYNK 267
             K G       +      +     I V+L    G L        ++    LL  G    
Sbjct: 223 AHKIGDYYRYAHDCGIIYAKD--PYIIVVLTKDIGDLSDEPYENGSEDERYLLDWGNEAY 280

Query: 268 TDRKKINYIIKDFYQQN 284
                I+  I    +++
Sbjct: 281 EMIANISKEIYVMVEED 297


>gi|155674975|gb|ABU24823.1| beta-lactamase PER-1 [Acinetobacter baumannii]
          Length = 307

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 61  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 120

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 121 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 177

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 178 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 237

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 238 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 285


>gi|254881094|ref|ZP_05253804.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640101|ref|ZP_07994828.1| exported D-alanyl-D-alanine carboxypeptidase penicillin-binding
          protein [Bacteroides sp. 3_1_40A]
 gi|254833887|gb|EET14196.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388379|gb|EFV69231.1| exported D-alanyl-D-alanine carboxypeptidase penicillin-binding
          protein [Bacteroides sp. 3_1_40A]
          Length = 466

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL-----------PYYTLLDTNTGHVIAENYPDH 49
          M++ L    + +  +      +++                   + D  TG  +     + 
Sbjct: 1  MKRVLFFFLLILSIHFINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTTGKSVYRYQDEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS+ K++T+    
Sbjct: 61 LYRPASVEKIITSVTAL 77


>gi|255102339|ref|ZP_05331316.1| putative penicillin-binding protein [Clostridium difficile
           QCD-63q42]
          Length = 340

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 55/219 (25%), Gaps = 14/219 (6%)

Query: 36  TNTGHVIAEN-----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
              G ++ E        D  ++ AS+TK + + ++   + +          +        
Sbjct: 46  ARKGKIVFEKYYNGYNADDTFHVASVTKSIISALIGIAIDKGYIKDVDQKVVDFFPEYTC 105

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
             +   KK  T+     +           ++          K  +  +    + +G    
Sbjct: 106 SPSEICKKAVTIRHLLTMTAPYPFKNMTESLERLCKQKDWIKYTLNQLGQKGE-IGTFKY 164

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                H +      TT +     +                   +   + +   N      
Sbjct: 165 SSAGTHLLSAIITKTTGKSAREFANEYLFKPIGMKVIPDYDMKDFGFEDFFGKNLKGWAK 224

Query: 211 L--GADGMKTGFTCASGFNIVASA------IQGDQSLIA 241
              G      G T ++   +          I  ++ +I+
Sbjct: 225 DRQGYSIGGWGLTLSARDMLRFGFLYLNDGIWNNKRIIS 263


>gi|167576881|ref|ZP_02369755.1| beta-lactamase precursor [Burkholderia thailandensis TXDOH]
          Length = 269

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCSRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   ++        +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDTYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A      +        +  KN GL  +  
Sbjct: 115 HLGAQRFARYAKAFDYGNADVSGDPGKNNGLDRSWI 150


>gi|254976789|ref|ZP_05273261.1| putative penicillin-binding protein [Clostridium difficile
           QCD-66c26]
 gi|255094175|ref|ZP_05323653.1| putative penicillin-binding protein [Clostridium difficile CIP
           107932]
 gi|255315927|ref|ZP_05357510.1| putative penicillin-binding protein [Clostridium difficile
           QCD-76w55]
 gi|255518586|ref|ZP_05386262.1| putative penicillin-binding protein [Clostridium difficile
           QCD-97b34]
 gi|255651706|ref|ZP_05398608.1| putative penicillin-binding protein [Clostridium difficile
           QCD-37x79]
 gi|260684739|ref|YP_003216024.1| putative penicillin-binding protein [Clostridium difficile CD196]
 gi|260688397|ref|YP_003219531.1| putative penicillin-binding protein [Clostridium difficile R20291]
 gi|306521505|ref|ZP_07407852.1| putative penicillin-binding protein [Clostridium difficile
           QCD-32g58]
 gi|260210902|emb|CBA66103.1| putative penicillin-binding protein [Clostridium difficile CD196]
 gi|260214414|emb|CBE06838.1| putative penicillin-binding protein [Clostridium difficile R20291]
          Length = 340

 Score = 41.5 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/219 (10%), Positives = 55/219 (25%), Gaps = 14/219 (6%)

Query: 36  TNTGHVIAEN-----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
              G V+ E        D  ++ AS+TK + + ++   + +          +        
Sbjct: 46  ARKGKVVFEKYYNGYNADDTFHVASVTKSIISALIGIAIDKGYIKDVDQKVVDFFPEYTC 105

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
             +   KK  T+     +           ++          K  +  +    + +G    
Sbjct: 106 SPSEICKKAVTIRHLLTMTAPYPFKNMTESLERLCKQKDWIKYTLNQLGQKGE-IGTFKY 164

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                H +      TT +     +                   +   + +   N      
Sbjct: 165 SSAGTHLLSAIITKTTGKSAREFANEYLFKPIGMKVIPDYDMKDFGFEDFFGKNLKGWAK 224

Query: 211 L--GADGMKTGFTCASGFNIVASA------IQGDQSLIA 241
              G      G T ++   +          I  ++ +I+
Sbjct: 225 DRQGYSIGGWGLTLSARDMLRFGFLYLNDGIWNNKRIIS 263


>gi|331699848|ref|YP_004336087.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Pseudonocardia dioxanivorans CB1190]
 gi|326954537|gb|AEA28234.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Pseudonocardia dioxanivorans CB1190]
          Length = 471

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 6/60 (10%)

Query: 13  LSNIFPFLSIAETNKLPYYT------LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           L       +  +              ++D +TG  + +   D P  P S  KL+T+    
Sbjct: 72  LPTAAGLTAALQPVTGTSALGTFGGAVVDPSTGSQLWQRAVDQPLAPGSTAKLLTSAAAL 131


>gi|291005123|ref|ZP_06563096.1| lipoprotein [Saccharopolyspora erythraea NRRL 2338]
          Length = 284

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 12 MLSNIFPFLSIAETNKLP---YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          + +        A          YT++D  +G    ++     +  AS+ KL+ A      
Sbjct: 2  IAATPALSAPQAPQVDPGITLGYTVVDARSGETTLQSNEHEQFRSASVVKLLIALDYLEG 61

Query: 69 LKEK 72
          L+  
Sbjct: 62 LEPG 65


>gi|220919035|ref|YP_002494339.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956889|gb|ACL67273.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 743

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 15  NIFPFLSIAETNKLPYYTLLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +   +  +         L+   +TG V+    PD   NPAS  KL+T+    
Sbjct: 52  ALTAIVDGSPLAGARVGILVSAIDTGEVVYARDPDVLLNPASNVKLVTSAAAL 104


>gi|150003677|ref|YP_001298421.1| putative exported D-alanyl-D-alanine carboxypeptidase
          penicillin-binding protein [Bacteroides vulgatus ATCC
          8482]
 gi|149932101|gb|ABR38799.1| putative exported D-alanyl-D-alanine carboxypeptidase
          penicillin-binding protein [Bacteroides vulgatus ATCC
          8482]
          Length = 466

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL-----------PYYTLLDTNTGHVIAENYPDH 49
          M++ L    + +  +      +++                   + D  TG  +     + 
Sbjct: 1  MKRVLFFFLLILSIHFINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTTGKSVYRYQDEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS+ K++T+    
Sbjct: 61 LYRPASVEKIITSVTAL 77


>gi|46244168|gb|AAP93848.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 157

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 26/90 (28%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 38  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 97

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           S       MT+       I  S N     +
Sbjct: 98  SEKHLVDGMTIGELCAAAITLSDNSAGNLL 127


>gi|262274894|ref|ZP_06052705.1| D-alanyl-D-alanine carboxypeptidase [Grimontia hollisae CIP
          101886]
 gi|262221457|gb|EEY72771.1| D-alanyl-D-alanine carboxypeptidase [Grimontia hollisae CIP
          101886]
          Length = 471

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYT---LLDTNTGHVIAENYPDHPWNPASLTKL 59
           F +++ ++  ++  P   I             + D +    I     D    PAS  K+
Sbjct: 6  IFFLLLPLSFATSAVPLNKIEAMLPAGSQLALSVYDASARAKIVSVDDDILLPPASTQKV 65

Query: 60 MTAYVV 65
          +TA   
Sbjct: 66 VTALAA 71


>gi|157692576|ref|YP_001487038.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
 gi|157681334|gb|ABV62478.1| serine-type D-Ala-D-Ala carboxypeptidase [Bacillus pumilus
           SAFR-032]
          Length = 494

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 28/109 (25%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLP----YYT--------------------- 32
           M++F   L +    +     PF +  +          +                      
Sbjct: 1   MKRFSQLLFLQICILSILFLPFSAKDDQLTARNGSLSWMTTLDEFIRKAPDLEGAISGIS 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
           + DT+   ++ E+  D    PAS  KL+T+ +    L E     T    
Sbjct: 61  VRDTSDSSLLYEHQADIRLTPASNMKLLTSAIALDILGETHTFPTDIWM 109


>gi|168494147|ref|ZP_02718290.1| penicillin-binding protein 1B [Streptococcus pneumoniae CDC3059-06]
 gi|38141957|dbj|BAD00781.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141987|dbj|BAD00796.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|183575936|gb|EDT96464.1| penicillin-binding protein 1B [Streptococcus pneumoniae CDC3059-06]
          Length = 821

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|89074262|ref|ZP_01160752.1| beta-lactamase [Photobacterium sp. SKA34]
 gi|89049966|gb|EAR55500.1| beta-lactamase [Photobacterium sp. SKA34]
          Length = 295

 Score = 41.5 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 22/278 (7%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYT--------------LLDTNTGHVIAENYP 47
           +  +  +  A L   F  +S+AE   +                  +LD   G  +   + 
Sbjct: 10  KHIIGSVLTAFLLG-FSSVSLAENITVNSAIEHAEKQLGARIGVSVLDGK-GKQLYGYHS 67

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  +   S  K +    +    +    M+  P  I+ +A          K G+ ++L  A
Sbjct: 68  DQRFPLMSTFKTLACAKLLHDNQINNGMMDKPYQITADAILDYAPVFKDKVGTEVSLKEA 127

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTT 166
               +  S N  A  +   +          +N+      L     +            TT
Sbjct: 128 CFATMTTSDNSAANLVLSHIGGPVGVTTFLINSGDSVTRLDRIEPLLNEATPGDKRDTTT 187

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCASG 225
              M      +           Q     ++  K  N         G +   ++G      
Sbjct: 188 PYAMNKTITNLVLGNALNKSSKQQLKDWMEANKVSNGLLRSVLPKGWEIADRSGAGGHGS 247

Query: 226 FNIVASAIQGDQS--LIAVIL-GAL-DRNTRNKVSASL 259
             I A      +   +I++ L G       R+K  A +
Sbjct: 248 RGITAVVWNEQKQPLVISIYLTGTKASIPERDKEIAQI 285


>gi|268317428|ref|YP_003291147.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Rhodothermus marinus DSM 4252]
 gi|262334962|gb|ACY48759.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Rhodothermus marinus DSM 4252]
          Length = 497

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 16/84 (19%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAE-TNKLP---------------YYTLLDTNTGHVIAE 44
          MR  +  I + + +   P  + +  T +                    +LD     V+  
Sbjct: 1  MRLRIWPILLLLWTVPAPVHAQSPRTLQATLDRVLDDPAYESAFWGALVLDLRDSTVLYA 60

Query: 45 NYPDHPWNPASLTKLMTAYVVFSF 68
           +    + PAS+TKL         
Sbjct: 61 RHARQNFTPASVTKLFITAAALEQ 84


>gi|322368704|ref|ZP_08043271.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Haladaptatus paucihalophilus DX253]
 gi|320551435|gb|EFW93082.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Haladaptatus paucihalophilus DX253]
          Length = 483

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 39 GHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          G V+A +  D    PAS TKL+T  + F  
Sbjct: 64 GDVLASHQADTVVKPASNTKLLTTALAFEH 93


>gi|254463746|ref|ZP_05077157.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacterales bacterium Y4I]
 gi|206684654|gb|EDZ45136.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacterales bacterium Y4I]
          Length = 494

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          + D  TG ++  +       PAS+ K +TA     
Sbjct: 63 VADVKTGKLLEASGSGEALPPASVAKALTALYALD 97


>gi|52858439|gb|AAU89132.1| extended spectrum beta lactamase PER-3 [Aeromonas caviae]
          Length = 308

 Score = 41.5 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 70/226 (30%), Gaps = 15/226 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNSTFKKGSTM 102
            P   +   S+ KL  A +V   + + K  L   + +++     + + P    ++     
Sbjct: 62  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 121

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--Q 160
                L    V  ++++A  +   L         ++ +          +    H     Q
Sbjct: 122 VPVQQLLQYSVSLSDNVACDLLFELVGGPAALHDYIQSMGIKETAVVANEAQMHADDQVQ 181

Query: 161 HGHYTTARDMAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
           + ++T+ +  A +  + +             +    +      + K        V    G
Sbjct: 182 YQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAHKTG 241

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 242 TSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 286


>gi|317505053|ref|ZP_07963000.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella salivae DSM 15606]
 gi|315663831|gb|EFV03551.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella salivae DSM 15606]
          Length = 420

 Score = 41.1 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/217 (11%), Positives = 52/217 (23%), Gaps = 9/217 (4%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + D +    I          PAS  KL+TA      L       T      K  +    
Sbjct: 78  MVYDLDADSTIFAYNERQLMRPASTMKLITAITAIDQLGGDYQFRTELCYTGKIENNKLI 137

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
            +     G     +       V++   + V   +         ++      +       +
Sbjct: 138 GDIYCVGGFDPRFNTDDLNAFVEAIRKMGVDTIQGH-LYADLSMKDTKQYGEGWCWDDKN 196

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI--------KGLEIKGKKYPNT 203
            +    +V       AR +  L+              +         +   I        
Sbjct: 197 PVLTPLLVGGKDIFMARFLDALTSHGVYVDATIDEKRKPIDAFCIVNRFHTIDQILMRML 256

Query: 204 NWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLI 240
             +   +  A   +   +  +      SA   ++ L+
Sbjct: 257 KESNNLYAEAMYYQIAASTGNHPASAKSARNVERRLV 293


>gi|221229322|gb|ABO61014.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 301

 Score = 41.1 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K +    V S     +  L T + I+         
Sbjct: 59  VLNTGNGRRIGGHRQDERFPMCSTFKSLLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 118

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 119 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEP 178

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 179 DVNLFVKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGT 238

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 239 RWRVGDKTGSNGDDTRNDIAVLW 261


>gi|202071180|gb|ABO61015.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 301

 Score = 41.1 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 55/203 (27%), Gaps = 2/203 (0%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +L+T  G  I  +  D  +   S  K +    V S     +  L T + I+         
Sbjct: 59  VLNTGNGRRIGGHRQDERFPMCSTFKSLLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAP 118

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  +T+ +  +  +  S N  A  +            F++   ++      +  
Sbjct: 119 VARRHVGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEP 178

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         + A     L+     +  Q     Q     I  +       A    
Sbjct: 179 DVNLFVKGDPRDTTSPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGT 238

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 239 RWRVGDKTGSNGDDTRNDIAVLW 261


>gi|148989917|ref|ZP_01821200.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP6-BS73]
 gi|147924702|gb|EDK75787.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP6-BS73]
          Length = 821

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|124244221|gb|ABM92282.1| beta-lactamase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
          Length = 299

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 76/254 (29%), Gaps = 15/254 (5%)

Query: 3   QFLVIIAMAMLSNIFPFL-----------SIAETNKLPYYT-LLDTNTGHVIAENYPDHP 50
           +FL   +  + S +F              +I  +        + DT  G    +   +  
Sbjct: 13  KFLWAFSHLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVYDTQNGE-YWDYNGNQR 71

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    +    ++ K    + + I K            + G  +TLD+A   
Sbjct: 72  FPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFA 131

Query: 111 LIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +  S N  A  I  ++   K    F++ + +    L                   T   
Sbjct: 132 TMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKA 191

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
             + L+  +       M+  +++   +  +   N   +V         ++G       +I
Sbjct: 192 IASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSI 251

Query: 229 VASAIQGDQSLIAV 242
            A      Q+ I V
Sbjct: 252 TAVVWSEHQAPIIV 265


>gi|23345326|gb|AAN28732.1| class A beta-lactamase [Klebsiella oxytoca]
          Length = 288

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 70/242 (28%), Gaps = 12/242 (4%)

Query: 33  LLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           L+DT +   ++     D  +   S  K+M A  V    +  K ++   + I  +      
Sbjct: 49  LIDTTDNSQILY--RGDERFAMCSTGKVMAAAAVLKQSESNKDVVNKRLEIKASDLVVWS 106

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSA 149
             +     S MTL       +  S N     +   L   EK   F + + + +  L  + 
Sbjct: 107 PVTEKHLQSGMTLAELSAAALQYSDNTAMNKMIGYLGGPEKVTAFARSIGDVTFRLDRTE 166

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A    +    T       L      +        Q+            +  A   
Sbjct: 167 PALNTAIPGDERDTTTPLAMAESLHKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLP 226

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAV------ILGALDRNTRNKVSASLLSM 262
                G KTG       N +A     +   L+ V      +  A  R      +A +++ 
Sbjct: 227 ASWVVGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPLQDAKSRKDVLAAAAKIVTE 286

Query: 263 GF 264
           G 
Sbjct: 287 GL 288


>gi|87198305|ref|YP_495562.1| Beta-lactamase [Novosphingobium aromaticivorans DSM 12444]
 gi|87133986|gb|ABD24728.1| Beta-lactamase [Novosphingobium aromaticivorans DSM 12444]
          Length = 353

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 61/200 (30%), Gaps = 33/200 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT---------------------------- 32
           M+     I  A++      ++     +                                 
Sbjct: 33  MKFRTARIIAALMVAAPALVATVPAVQSRATVSLQDQRDQAIQQQVAAIAAEGRGRIGVA 92

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
            +D + G  I     D P+  AS  K+  A      +++    L     +    +E    
Sbjct: 93  AMDLDGGGQIF-VNGDMPFPMASTAKVAVAATFLEQVEKGNFRLDQQFPMMVRVAETGRV 151

Query: 93  N--STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLS 148
           +  +  + G+ MT  + ++L+I +S N+    +  ++   +   +++     T + L  +
Sbjct: 152 SAEAPLRAGTVMTAQSLMELMITRSHNEATDGLIHAVGGYENVNRWLTRNGITGQRLDHT 211

Query: 149 ATHFMNAHGVVQHGHYTTAR 168
               +   G +        R
Sbjct: 212 MATLVRDDGRIDPAKVIDTR 231


>gi|15903950|ref|NP_359500.1| penicillin-binding protein 1B [Streptococcus pneumoniae R6]
 gi|116516492|ref|YP_817313.1| penicillin-binding protein 1B [Streptococcus pneumoniae D39]
 gi|307128358|ref|YP_003880389.1| penicillin-binding protein 1B [Streptococcus pneumoniae 670-6B]
 gi|6165962|gb|AAF04736.1|AF101781_1 penicillin-binding protein 1b [Streptococcus pneumoniae]
 gi|2982642|emb|CAA05302.1| penicillin-binding protein 1b [Streptococcus pneumoniae]
 gi|15459604|gb|AAL00711.1| Penicillin-binding protein 1b [Streptococcus pneumoniae R6]
 gi|38142005|dbj|BAD00805.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142009|dbj|BAD00807.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|116077068|gb|ABJ54788.1| penicillin-binding protein 1B [Streptococcus pneumoniae D39]
 gi|306485420|gb|ADM92289.1| penicillin-binding protein 1B [Streptococcus pneumoniae 670-6B]
          Length = 821

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|169833945|ref|YP_001695460.1| penicillin-binding protein 1B [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168996447|gb|ACA37059.1| penicillin-binding protein 1B [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 821

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|168486914|ref|ZP_02711422.1| penicillin-binding protein 1b [Streptococcus pneumoniae CDC1087-00]
 gi|183570144|gb|EDT90672.1| penicillin-binding protein 1b [Streptococcus pneumoniae CDC1087-00]
          Length = 821

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|38141967|dbj|BAD00786.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 821

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|148984395|ref|ZP_01817683.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP3-BS71]
 gi|38141965|dbj|BAD00785.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141971|dbj|BAD00788.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141977|dbj|BAD00791.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141993|dbj|BAD00799.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141997|dbj|BAD00801.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|147923172|gb|EDK74286.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP3-BS71]
 gi|301800845|emb|CBW33502.1| penicillin-binding protein 1B [Streptococcus pneumoniae OXC141]
          Length = 821

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|461629|sp|P80298|BLAC_PROVU RecName: Full=Beta-lactamase; AltName: Full=Penicillinase
          Length = 271

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 71/234 (30%), Gaps = 9/234 (3%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    +    +++  +L   I I+K+        +     + M+L  
Sbjct: 38  GEERFAMASTSKVMAVAAILKESEKQAGLLDKNIIITKSDLVAYSPITEKHLATGMSLAQ 97

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I + L    K  +F + +N+ +  L         A         
Sbjct: 98  LSAATLQYSDNTAMNKILDYLGGPSKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 157

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF-TCA 223
           +       L      D        Q+           ++  A        G KTG     
Sbjct: 158 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDHSIKAGLPKHWIVGDKTGSGDYG 217

Query: 224 SGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSMGFYNKTDRK 271
           +  +I     +    LI V+        A  R      +  +++  F N + +K
Sbjct: 218 TTNDIAVIWPKNHAPLILVVYFTQQEQDAKYRKDIIVKATEIVTKEFSNTSQKK 271


>gi|255325833|ref|ZP_05366925.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Corynebacterium tuberculostearicum SK141]
 gi|255297045|gb|EET76370.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Corynebacterium tuberculostearicum SK141]
          Length = 415

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKL 59
          ++DT TG V+ +   D    PAS TK+
Sbjct: 71 VIDTETGDVVWQRDADKRLTPASSTKV 97


>gi|311740138|ref|ZP_07713971.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304834|gb|EFQ80904.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 428

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++DT TG V+ +   D    PAS TK+
Sbjct: 84  VIDTETGDVVWQRDADKRLTPASSTKV 110


>gi|66817024|gb|AAY56816.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 752

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 394 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 453

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 454 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 511

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 512 GYEIPEYGIESLPMGGGIEVTVAQH 536


>gi|46244164|gb|AAP93846.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 157

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 35/127 (27%), Gaps = 7/127 (5%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY-------YTLLDTNTGHVIAENYPDHPWNPASL 56
            + ++A   L+       + +  +             +D  +G  +     D  +   S 
Sbjct: 1   IISLLAALPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMIST 60

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++    V + +      L   I   +         S       MT+       I  S 
Sbjct: 61  FKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSD 120

Query: 117 NDIAVAI 123
           N  A  +
Sbjct: 121 NSAANLL 127


>gi|254431801|ref|ZP_05045504.1| beta-lactamase [Cyanobium sp. PCC 7001]
 gi|197626254|gb|EDY38813.1| beta-lactamase [Cyanobium sp. PCC 7001]
          Length = 333

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 9/163 (5%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +  LS  +  L+ A+        LL  + G   AE   D     AS  K          +
Sbjct: 59  LTALSESWARLAAAQQGLQASGFLLVLDDGR-YAELQADQALPAASSIKTPILLAGLEDV 117

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCK 129
              K     P+ ++K            +   T          +++ +++ A  +      
Sbjct: 118 DAGKIRWNEPLPLTKEVVGGGAGWMASRPVGTRFPFFESATEMIRVSDNSATNLL----I 173

Query: 130 TEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG--HYTTARDM 170
                 + +N   + LGL     +  + +      + T+ARD+
Sbjct: 174 KRLGGKEKLNARFQALGL--PATVINNWLPDLEGTNTTSARDL 214


>gi|33597187|ref|NP_884830.1| putative beta-lactamase [Bordetella parapertussis 12822]
 gi|33601032|ref|NP_888592.1| putative beta-lactamase [Bordetella bronchiseptica RB50]
 gi|33573614|emb|CAE37898.1| Putative beta-lactamase [Bordetella parapertussis]
 gi|33575467|emb|CAE32545.1| Putative beta-lactamase [Bordetella bronchiseptica RB50]
          Length = 305

 Score = 41.1 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 58/220 (26%), Gaps = 3/220 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
             +  D  +   S  KL+ A  V +        L   I             +  ++   M
Sbjct: 68  FSHRADERFPMCSTFKLLAAGAVLARADRGDDSLRRLIRYGAADIVAYSPVTGPRQAEGM 127

Query: 103 TLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
           TL+   +  + +S N     +            + + + +    L    T    A     
Sbjct: 128 TLEQLCEAAVTRSDNTAGNLLLSTLGGPPGLTAYARGLGDRMTRLDRIETALNEARPGDP 187

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T A     L   +  D  Q     ++    +  +       A        G KTG 
Sbjct: 188 RDTTTPAAMAGNLQRLLLGDALQSASRQRLADWLLASQTGDTRLRAGLPAGWRIGDKTGA 247

Query: 221 -TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASL 259
               +  +I     +    ++          +R   +A L
Sbjct: 248 GGHGTNNDIGVIWPRDGAPVLISAYLTQSSASREAQNAVL 287


>gi|229184731|ref|ZP_04311930.1| Beta-lactamase [Bacillus cereus BGSC 6E1]
 gi|228598745|gb|EEK56366.1| Beta-lactamase [Bacillus cereus BGSC 6E1]
          Length = 312

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++T T   IA   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 75  INTGTKQTIAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WIVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|157835256|pdb|2JE5|A Chain A, Structural And Mechanistic Basis Of Penicillin Binding
           Protein Inhibition By Lactivicins
 gi|157835257|pdb|2JE5|B Chain B, Structural And Mechanistic Basis Of Penicillin Binding
           Protein Inhibition By Lactivicins
 gi|164519445|pdb|2JCI|B Chain B, Structural Insights Into The Catalytic Mechanism And The
           Role Of Streptococcus Pneumoniae Pbp1b
          Length = 720

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 354 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 413

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 414 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 471

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 472 GYEIPEYGIESLPMGGGIEVTVAQH 496


>gi|257815405|gb|ACV69996.1| extended-spectrum beta-lactamase BEL-2 [Pseudomonas aeruginosa]
          Length = 283

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 65/216 (30%), Gaps = 5/216 (2%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSNST 95
             G++I     +  +   S  KL  A +V S +   +          S    EY P+   
Sbjct: 44  ENGNLIQGYRANERFAMCSTFKLPLAALVLSRIDAGEENPERKLHYDSAFLEEYAPAAKR 103

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFM 153
           +     MT+  A++  +  S N  A  + + +       K+ + + +             
Sbjct: 104 YVATGYMTVTEAIQSALQLSDNAAANLLLKEVGGPPLLTKYFRSLGDKVSRFDRIEPTLN 163

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
                 +    T       +S  I  D   Y    Q++ L I  +    T  A       
Sbjct: 164 TNTPGDERDTTTPMSMAQTVSKLIFGDTLTYKSKGQLRRLLIGNQTGDKTIRAGLPDSWV 223

Query: 214 DGMKTG-FTCASGFNIVASAIQGDQSLI-AVILGAL 247
            G KTG        ++        +  + +V   A 
Sbjct: 224 TGDKTGSCANGGRNDVAFFITTAGKKYVLSVYTNAP 259


>gi|228933797|ref|ZP_04096643.1| Beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228825869|gb|EEM71656.1| Beta-lactamase [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
          Length = 332

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   +A   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 95  IDTGTKQTVAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 151

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 152 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 211

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 212 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTN 271

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 272 WVVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKGATYD 316


>gi|20150074|pdb|1HZO|A Chain A, Structure Of Class A Cephalosporinase From Proteus
           Vulgaris K1
 gi|20150075|pdb|1HZO|B Chain B, Structure Of Class A Cephalosporinase From Proteus
           Vulgaris K1
          Length = 271

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    V    +++  +L   ITI K+        +     + MTL  
Sbjct: 38  GEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLVAYSPITEKHLTTGMTLAE 97

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I + L    K  +F + +N+ +  L         A         
Sbjct: 98  LSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 157

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +       L      D        Q+           N+  A        G KTG     
Sbjct: 158 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPKHWVVGDKTGSGDYG 217

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     +   LI V+
Sbjct: 218 TTNDIAVIWPENHAPLILVV 237


>gi|323344811|ref|ZP_08085035.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella oralis ATCC 33269]
 gi|323094081|gb|EFZ36658.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella oralis ATCC 33269]
          Length = 423

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 13/37 (35%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + D +    +  +       PAS  K++TA      
Sbjct: 81  MVYDLDADSTLYRHNERQLMRPASTMKIITAIAAIDK 117


>gi|209528054|ref|ZP_03276533.1| conserved hypothetical protein [Arthrospira maxima CS-328]
 gi|209491510|gb|EDZ91886.1| conserved hypothetical protein [Arthrospira maxima CS-328]
          Length = 451

 Score = 41.1 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 3/205 (1%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                P +PASL K+  A  +     E++      I +         S+   +   + +L
Sbjct: 227 RGSQTPASPASLIKVPVAIALLHKAAEEQVSFDQEIYVEGGNFTEDASS--IRARQSYSL 284

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK-NLGLSATHFMNAHGVVQHGH 163
              +  +I  S+N     + + L       +   +   K  +                G 
Sbjct: 285 QMLMAQMIDHSSNIATNQLIDYLSADYINKLLERHGYQKTRVQFKLMGDRIMPFRPGRGR 344

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            +   D          ++        I+ L  +  +        G      G KTG    
Sbjct: 345 NSMTSDELTEMMVEIYNYEHPHSELLIEALGHQYDREIGYQALQGLKAQWLGEKTGQNSR 404

Query: 224 SGFNIVASAIQGDQSLIAVILGALD 248
                +A++I G++ +I +   +  
Sbjct: 405 VIGTTLAASIDGERYIITITDNSAG 429


>gi|153807119|ref|ZP_01959787.1| hypothetical protein BACCAC_01396 [Bacteroides caccae ATCC 43185]
 gi|149130239|gb|EDM21449.1| hypothetical protein BACCAC_01396 [Bacteroides caccae ATCC 43185]
          Length = 468

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     D 
Sbjct: 1  MKKVLLLVALSVCLLPLWGQRDFSQIDSLIKKMLPEASEVGISVYDLTAKRPLYSYRADK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+ A    
Sbjct: 61 LSRPASTMKLLMAITAL 77


>gi|323483052|ref|ZP_08088445.1| beta-lactamase [Clostridium symbiosum WAL-14163]
 gi|323403592|gb|EGA95897.1| beta-lactamase [Clostridium symbiosum WAL-14163]
          Length = 288

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 54/207 (26%), Gaps = 11/207 (5%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-YPPSNSTFKKGST 101
                D     AS+ KL+    +   +   +  L   I I++             + G  
Sbjct: 35  FSIDGDRRVPSASMIKLVIMAELMRRVGAGELSLEEKIKITQEMRTGGDGVLKELEPGHE 94

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            +L   L L+I+ S N+    + + L       +  +N  +  LGL            + 
Sbjct: 95  FSLREILTLMIIVSDNEATNILIQML------GMDRINRMAAELGLKEAVLGRKMMDSEA 148

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIK----GLEIKGKKYPNTNWAVGTFLGADGMK 217
                   +      +             K     L+I  ++  +    +      +   
Sbjct: 149 KKQGRDNFICADDIMLILKKIYEGSCVDRKASALMLDILKRQQQSGRLQLYLPEDVEVAH 208

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVIL 244
                    N     +      I  +L
Sbjct: 209 KCGDLDFLENDGGIILLPGHPYILAVL 235


>gi|223868933|gb|ACN22483.1| extended spectrum beta-lactamase [Providencia rettgeri]
          Length = 308

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 62  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 121

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 122 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 178

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 179 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 238

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 239 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 286


>gi|311895544|dbj|BAJ27952.1| putative cell division protein FtsI [Kitasatospora setae KM-6054]
          Length = 718

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 46/165 (27%), Gaps = 26/165 (15%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIA-------------ENYPDH--------PWNPA 54
                      +  Y  + D  TG V+A                 D          + P 
Sbjct: 367 AITDQVANAGAEKGYVIVQDVRTGQVLAMATSPGFDPNDLASARADQLGNAALQDAYEPG 426

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  KLMT   V       KA   T + +    +               T    L  ++ K
Sbjct: 427 STAKLMTMAAVLD---TGKANWDTHVEVPN--TLQRADRVFHDDIDHETWYLTLAGVLAK 481

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           S+N   +  AE L  T+ +  + + +     G+     +   G  
Sbjct: 482 SSNIGTIEAAEHLGATQAESNKVLADYLDRFGIGKPSGLGFPGET 526


>gi|319792163|ref|YP_004153803.1| beta-lactamase [Variovorax paradoxus EPS]
 gi|315594626|gb|ADU35692.1| Beta-lactamase [Variovorax paradoxus EPS]
          Length = 290

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 48/210 (22%), Gaps = 32/210 (15%)

Query: 30  YYTLLDTNTGH--VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
            + +LD+ T    V+     D  ++PAS  K+  + +       K         I     
Sbjct: 66  TWVVLDSATAKLTVVDRRRADKRYSPASTFKIPNSLIALETGAVKDID-----EILPYGG 120

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                    +  +         L I +                 +  +  MN     L  
Sbjct: 121 GTYKRKEWERDMNLRDAIRVSHLPIYRGVAR-------------RIGLARMNEWIAKLHY 167

Query: 148 SATHF---MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                   ++   V      + A  +  L           +    +              
Sbjct: 168 GNETLDTEVDQFWVNDKLQISAAEQVRFLMR---------LAQRSLPMSTRTQDMVHEIT 218

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                   A   KTG+    GF++      
Sbjct: 219 LLEKMPTHALHGKTGWYETPGFSLGWWVGW 248


>gi|126700815|ref|YP_001089712.1| putative penicillin-binding protein [Clostridium difficile 630]
 gi|115252252|emb|CAJ70093.1| putative penicillin-binding protein [Clostridium difficile]
          Length = 320

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/219 (9%), Positives = 55/219 (25%), Gaps = 14/219 (6%)

Query: 36  TNTGHVIAEN-----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
              G ++ E        D  ++ AS+TK + + ++   + +          +        
Sbjct: 26  ARKGKIVFEKYYNGYNADDTFHVASVTKSIISALIGIAIDKGYIKDVDQKVVDFFPEYTC 85

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
             +   KK  T+     +           ++          K  +  +    + +G    
Sbjct: 86  SPSEICKKAVTIRHLLTMTAPYPFKNMTESLERLCKQKDWIKYTLNQLGQKGE-IGTFKY 144

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                H +      TT +     +                   +   + +   N      
Sbjct: 145 SSAGTHLLSAIITKTTGKSAREFANEYLFKPIGMKVIPDYDMKDFGFEDFFGKNLKGWAK 204

Query: 211 L--GADGMKTGFTCASGFNIVASA------IQGDQSLIA 241
              G      G T ++   +          I  ++ +I+
Sbjct: 205 DRQGYSIGGWGLTLSARDMLRFGFLYLNDGIWNNKRIIS 243


>gi|227532818|ref|ZP_03962867.1| beta-lactamase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227189559|gb|EEI69626.1| beta-lactamase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 261

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 61/218 (27%), Gaps = 11/218 (5%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
            +  L+  +T HV+     D P+  ASL KL  A  V     +  + L     ++   S 
Sbjct: 20  KHALLV-ADTRHVLFGAQVDQPFPAASLIKLGIAAFVKEKAADDPSQL--ERQVTLPESV 76

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL- 147
                  F       + + L L++  S N    A+  +            + +   L   
Sbjct: 77  GGAGVLRFMSPQAWRVRDLLTLMLTVSDNLATNALLTTYGLPTIAAWLTRHYSGVQLRRP 136

Query: 148 -SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
              + F   + +     +   R +                    +            N+ 
Sbjct: 137 LMQSTFDGDNMITASAAWQLLRALLTSDGNEPAADICAQALRHQQNRTKLLLAPTMENFV 196

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                G    KTG       +    A    + L AV+L
Sbjct: 197 -----GWLAGKTGELPHCEHDAACFAA-EGERLYAVVL 228


>gi|188988411|gb|ACD67727.1| beta-lactamase PER-5 [Acinetobacter baumannii]
 gi|297166888|gb|ADI16146.1| PER [Acinetobacter baumannii]
          Length = 273

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/226 (11%), Positives = 69/226 (30%), Gaps = 15/226 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNSTFKKGSTM 102
            P   +   S+ KL  A +V   + + K  L   + +++     + + P    ++     
Sbjct: 46  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 105

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--Q 160
                L    V  ++ +A  +   L         ++ +          +    H     Q
Sbjct: 106 VPVQQLLQYSVSHSDSVACDLLFELVGGPAALHDYIQSMGIKETAVVANEAQMHADDQVQ 165

Query: 161 HGHYTTARDMAILSWRIKTDFP--------QYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
           + ++T+ +  A +  + +             +    +      + K        V    G
Sbjct: 166 YQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAHKTG 225

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 226 TSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 270


>gi|126174299|ref|YP_001050448.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS155]
 gi|125997504|gb|ABN61579.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS155]
          Length = 502

 Score = 41.1 bits (94), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%)

Query: 14 SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          S       I+  +       +D +   VI     +  + PAS  KL+TA    
Sbjct: 38 SLSQAVSKISPRHSQIALLAMDMSNNQVIFSQQAETLFIPASTQKLLTAVSAM 90


>gi|326386583|ref|ZP_08208205.1| Beta-lactamase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208898|gb|EGD59693.1| Beta-lactamase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 325

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 81/280 (28%), Gaps = 39/280 (13%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPY---------------YTL-----------LD 35
           R+   ++A  +        + A  ++ P                  +           +D
Sbjct: 9   RKISTVLAALVAVPALLATTPAVQSRSPAPVQDQHDLAIQRTVEAIVARARGRVGVAAVD 68

Query: 36  TNTG-HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSN 93
            + G  V+     D P+  AS  K+  A    + +++ +  L      +   A     + 
Sbjct: 69  LDGGGQVLV--NGDMPFPMASTAKVAVAATFLAGVEQGRHRLDQQLPMMMPVAERSHSAV 126

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATH 151
           +  + G  MT    ++L+I +S N     +  ++        ++       ++L  +   
Sbjct: 127 AAVRPGPVMTAQQLMELMITRSNNHATDGLIAAVGGIGAVNSWLSKNGIVGQHLDSTMAT 186

Query: 152 FMNAHGVVQH----GHYTTARDMAILSWRIKTDFPQYMHYFQIK---GLEIKGKKYPNTN 204
            +   G +        +T++   A+ +     D    +             +     N  
Sbjct: 187 LVRDDGHINPAKTIDTHTSSTPRAMAALLAAIDRGGALSPQSRAVLLDTMTRTSTGKNRM 246

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            A          KTG       ++    +   + L   + 
Sbjct: 247 RAGLPEGTIFAHKTGTLSGVTDDVGIIRLPDGRHLALAVF 286


>gi|196043277|ref|ZP_03110515.1| beta-lactamase Bla1 [Bacillus cereus 03BB108]
 gi|225864486|ref|YP_002749864.1| beta-lactamase Bla1 [Bacillus cereus 03BB102]
 gi|196025586|gb|EDX64255.1| beta-lactamase Bla1 [Bacillus cereus 03BB108]
 gi|225790653|gb|ACO30870.1| beta-lactamase Bla1 [Bacillus cereus 03BB102]
          Length = 276

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++T T   IA   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 39  INTGTKQTIAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 96  TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 155

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 156 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 215

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 216 WIVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 260


>gi|145588349|ref|YP_001154946.1| peptidoglycan glycosyltransferase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046755|gb|ABP33382.1| peptidoglycan synthetase FtsI [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 590

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 33/133 (24%), Gaps = 24/133 (18%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHPW-------------- 51
            +  N           K     +LDT TG ++A        P+                 
Sbjct: 235 FLAYNAVKNAVEEHHAKAGGAVVLDTQTGEILALANYPSYNPNDRRFLSGEQLRNRVMTD 294

Query: 52  --NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              P S  K +T  +             T + I       P   +       +T+   ++
Sbjct: 295 TFEPGSTIKPLTISIALEK---GAVTPNTNMVIGAKYLVGPKPITDTHPYGNLTVAQIIQ 351

Query: 110 LLIVKSANDIAVA 122
                    IA+ 
Sbjct: 352 KSSNIGTAKIAMN 364


>gi|584848|sp|P37321|BLE1_PSEAE RecName: Full=Extended-spectrum beta-lactamase PER-1; Flags:
           Precursor
 gi|396145|emb|CAA79968.1| extended-spectrum beta-lactamase PER-1 [Pseudomonas aeruginosa]
 gi|48596235|emb|CAF18433.1| extended-spectrum beta-lactamase PER-1 [Pseudomonas aeruginosa]
 gi|58003741|gb|AAW62294.1| PER-1 [Pseudomonas aeruginosa]
 gi|60100164|gb|AAX13245.1| PER-1 [Pseudomonas aeruginosa]
 gi|71361069|emb|CAF29487.1| extended-spectrum beta-lactamase PER-1 [Alcaligenes faecalis]
 gi|146216708|gb|ABQ10556.1| extended-spectrum beta-lactamase PER-1 [Acinetobacter baumannii]
 gi|295002611|gb|ADF59064.1| extended-spectrum beta-lactamase PER-1 [Acinetobacter baumannii]
          Length = 308

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 62  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 121

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 122 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 178

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 179 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 238

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 239 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 286


>gi|167906254|ref|ZP_02493459.1| class A beta-lactamase [Burkholderia pseudomallei NCTC 13177]
          Length = 314

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 78/272 (28%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K              G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSASEPALLQRRIAYAKGDLIRYSPIIEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLMALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|118477909|ref|YP_895060.1| beta-lactamase [Bacillus thuringiensis str. Al Hakam]
 gi|118417134|gb|ABK85553.1| beta-lactamase [Bacillus thuringiensis str. Al Hakam]
          Length = 316

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++T T   IA   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 79  INTGTKQTIAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 135

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 136 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 195

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 196 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 255

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 256 WIVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 300


>gi|156740893|ref|YP_001431022.1| beta-lactamase [Roseiflexus castenholzii DSM 13941]
 gi|156232221|gb|ABU57004.1| beta-lactamase [Roseiflexus castenholzii DSM 13941]
          Length = 353

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          PD  +  AS+TKL TA  V   +      L  P
Sbjct: 53 PDDLFPVASITKLATALAVLRLVDRGLIELDDP 85


>gi|6580705|emb|CAB63491.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 60/203 (29%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K + A  V S  + + A+L T + +          
Sbjct: 62  LLDTASGRRI-GHRQDERFPMCSTFKSVLAATVLSQAERRPALLDTRVPVRDADLLSHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +          
Sbjct: 121 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRTSGDAVSRSDRLEP 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T     A L   +  +  Q     Q+    I  +       A    
Sbjct: 181 ELNSFAKGDPRDTTTPGAMAATLQRVVLGEVLQPASRQQLADWLIDNETGDACLRAGLGK 240

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 241 RWRVGDKTGSNGEDARNDIAVLW 263


>gi|16799276|ref|NP_469544.1| hypothetical protein lin0199 [Listeria innocua Clip11262]
 gi|16412618|emb|CAC95432.1| lin0199 [Listeria innocua Clip11262]
          Length = 257

 Score = 41.1 bits (94), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 60/234 (25%), Gaps = 16/234 (6%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SK 84
                  + D     V+     +  +  AS+ KL      F  + +K+  L T   I S+
Sbjct: 14  IDSKALFISDGE--KVLFAENENQLFTAASVIKLPIYLYFFEKIAKKELDLQTDFQIPSE 71

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                        +    TL+  L L+I  S N     +       E   +  + +  + 
Sbjct: 72  KVVAGAGIIQILPQKRIWTLEELLHLMIAVSDNTATNQLI------ELATITKLQSWLRE 125

Query: 145 LGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
                   +    +          +   A+  ++      +     +         +   
Sbjct: 126 NNWEDGIQLERQMMDFTTVKQNKISAKAAVTIFQKIMMLSEAYPDLKETIRRPLLNQQFR 185

Query: 203 TNWAVGTFL-GADG----MKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           +N        G  G     KTG       ++     +G     A +        
Sbjct: 186 SNLVGTLEEAGISGLQMLNKTGELKNIQHDVAVFEYKGKTRFAAALTNNTGLEA 239


>gi|313669015|ref|YP_004049299.1| peptidase [Neisseria lactamica ST-640]
 gi|313006477|emb|CBN87940.1| putative peptidase [Neisseria lactamica 020-06]
          Length = 469

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + +  +G V+ ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELGSGRVVIDHRADVPVNPASTMKLVTAFAAFK 70


>gi|313205965|ref|YP_004045142.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Riemerella
          anatipestifer DSM 15868]
 gi|312445281|gb|ADQ81636.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Riemerella
          anatipestifer DSM 15868]
          Length = 473

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           + D  +  +I+      P  PAS TKL+T
Sbjct: 67 VVYDPKSKQIISSCNEATPLVPASTTKLLT 96


>gi|309379652|emb|CBX21823.1| penicillin-binding protein 3 [Neisseria lactamica Y92-1009]
          Length = 469

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + +  +G V+ ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELGSGRVVIDHRADVPVNPASTMKLVTAFAAFK 70


>gi|298104552|gb|ADI55020.1| extended spectrum beta lactamase PER-1 [Aeromonas caviae]
          Length = 308

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 62  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 121

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 122 VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 178

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 179 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 238

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 239 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 286


>gi|296315108|ref|ZP_06865049.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria polysaccharea ATCC 43768]
 gi|296838021|gb|EFH21959.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Neisseria polysaccharea ATCC 43768]
          Length = 469

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + +  +G V+ ++  D P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELGSGRVVIDHRADVPVNPASTMKLVTAFAAFK 70


>gi|254461865|ref|ZP_05075281.1| penicillin-binding protein 2 [Rhodobacterales bacterium HTCC2083]
 gi|206678454|gb|EDZ42941.1| penicillin-binding protein 2 [Rhodobacteraceae bacterium HTCC2083]
          Length = 647

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 24/112 (21%), Gaps = 5/112 (4%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
             Y  L D +    +A       + P S  K++TA                 +       
Sbjct: 301 ADYAFLRDND-HRPLASKTVQDAYPPGSTFKMVTALAALEA---GLITAEDTVHC-PGHL 355

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           E         K +     N    L             +   +      + + 
Sbjct: 356 EVSGRKFHCWKPAGHGHMNLELSLRESCDVYYYDLALKVGIENISAMARKLG 407


>gi|226306155|ref|YP_002766115.1| D-alanyl-D-alanine carboxypeptidase [Rhodococcus erythropolis
          PR4]
 gi|226185272|dbj|BAH33376.1| putative D-alanyl-D-alanine carboxypeptidase [Rhodococcus
          erythropolis PR4]
          Length = 530

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 15/38 (39%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           Y L+D  T  V+  N  D     AS TK  T    + 
Sbjct: 59 SYLLVDPATDEVVYSNNADSSMFLASQTKHFTVGTAYD 96


>gi|189464722|ref|ZP_03013507.1| hypothetical protein BACINT_01066 [Bacteroides intestinalis DSM
          17393]
 gi|189436996|gb|EDV05981.1| hypothetical protein BACINT_01066 [Bacteroides intestinalis DSM
          17393]
          Length = 475

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 13/38 (34%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
          + D   G  +     D    PAS  KL+T     S   
Sbjct: 51 IYDLTDGKSLYTYQADKLSRPASTMKLLTTITALSHPD 88


>gi|258650636|ref|YP_003199792.1| beta-lactamase [Nakamurella multipartita DSM 44233]
 gi|258553861|gb|ACV76803.1| beta-lactamase [Nakamurella multipartita DSM 44233]
          Length = 381

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 28/87 (32%), Gaps = 2/87 (2%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             +  +  AS TK MTA VV    +E K  LT P  +SK  S  P  +S   +       
Sbjct: 44  DANTHFRIASNTKTMTAAVVLQLAQEGKLELTDP--VSKYVSGVPGGDSITVEQLLKMRT 101

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEK 132
                   +                ++
Sbjct: 102 GLYNYTNAQQMATSLDDDPTREWTPQE 128


>gi|255593455|ref|XP_002535872.1| Beta-lactamase OXA-18 precursor, putative [Ricinus communis]
 gi|223521673|gb|EEF26512.1| Beta-lactamase OXA-18 precursor, putative [Ricinus communis]
          Length = 411

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 70/272 (25%), Gaps = 34/272 (12%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYT------LLDTNTGHVI-AENYPDHPWNPASLTK 58
           +    A+ S +   L++  +             L+D  TG  +  E   D    PAS   
Sbjct: 140 LATLAALGSVLAASLALQPSLASQSAAQLSCVALVDAATGRQLRREGQCDARATPASTFN 199

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           ++ A + +                S    +       ++ G T       ++    S+  
Sbjct: 200 IVVALMGYD---------------SGILVDEHTPVFKYQPGYTTWNHEDWRIDTDPSSWI 244

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
               +  +   T +     +       G          G      ++  +    +S   +
Sbjct: 245 KYSNLWFAQQVTTRLGASGLQGYVNRFGYGNRDLSGTPGENNGLTWSWVQSSLQISADEQ 304

Query: 179 TDFPQYMHYFQIKGL-EIKGKKYPNTNWAVGTFLGADGMKTG-----------FTCASGF 226
             F + +   Q+    +         +            KTG                  
Sbjct: 305 IAFLRKIVNRQLPISAKAYDMTARILHPQTLANGWTIYGKTGTASPSLADGSEDNSRQYG 364

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVSAS 258
             V  A +G ++++   +    R      + +
Sbjct: 365 WYVGWATKGGRTIVFANMRLDQRQEEYAGART 396


>gi|94991763|ref|YP_599862.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS2096]
 gi|94545271|gb|ABF35318.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus pyogenes
           MGAS2096]
          Length = 166

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 188 FQIKGLEIKGKKYPNTNW----AVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
                     +++   N           G DG+KTG + ++ FN + +A +G   LI ++
Sbjct: 1   MHTMVGTPYEEEFHTYNHSLPDNQFGMKGVDGLKTGSSPSAAFNAMITAKRGKTRLITIV 60

Query: 244 LGALDRNT------RNKVSASLLSMGFY-NKTDRKKINYIIKDFYQQNLSNEVPN 291
           +G  D +       R+    +L   GF  +KT  KK    ++    Q      P 
Sbjct: 61  MGVGDWSDQNGEFYRHPFVNALTEKGFKDSKTLSKKARQKLEKLVPQTKKETSPK 115


>gi|33863404|ref|NP_894964.1| putative beta-lactamase [Prochlorococcus marinus str. MIT 9313]
 gi|33640853|emb|CAE21308.1| putative beta-lactamase [Prochlorococcus marinus str. MIT 9313]
          Length = 386

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 10/139 (7%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             +   + L+  + G   AE   +     AS  K     V    +   +     P+ ++K
Sbjct: 115 DLQASAFLLV-LDDGR-YAELSAETALPAASSIKTAILLVALELIDSGQLSWNEPLKLTK 172

Query: 85  NASEYPPSNSTFKK-GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
                       K  GS          +I  S N     + + +          +N    
Sbjct: 173 EIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRI-----GGKDVLNARFN 227

Query: 144 NLGLSATHFMNAHGVVQHG 162
            LGLS+   +  + +    
Sbjct: 228 ALGLSS--TVVNNWLPDLQ 244


>gi|260063286|ref|YP_003196366.1| hypothetical protein RB2501_00711 [Robiginitalea biformata
          HTCC2501]
 gi|88783380|gb|EAR14552.1| hypothetical protein RB2501_00711 [Robiginitalea biformata
          HTCC2501]
          Length = 432

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           L+D  +   +     +  + PAS  KL T Y    
Sbjct: 54 LLVDATSRDTLFSLNAEKYFTPASNVKLFTLYAALK 89


>gi|296101495|ref|YP_003611641.1| beta-lactam binding protein AmpH [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055954|gb|ADF60692.1| beta-lactam binding protein AmpH [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 388

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 35/112 (31%), Gaps = 34/112 (30%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-----------------------YYTLLDTN 37
           M++ L+  A A+ +  F     A+    P                          ++D N
Sbjct: 1   MKRCLLFFA-ALCAVSFSTAQAAQPLTAPVLASDIADRYANLIYYGSGATGMAMVVIDGN 59

Query: 38  T------GHVIAENYP----DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  G     N      D     ASLTKLMT+ ++   L +    L  P
Sbjct: 60  QRVFRSFGETRPGNNVHPQLDSVIRIASLTKLMTSEMLVKLLDQGVVKLDDP 111


>gi|255693329|ref|ZP_05417004.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides finegoldii DSM 17565]
 gi|260620905|gb|EEX43776.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides finegoldii DSM 17565]
          Length = 467

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M+  ++ +  +                  +             + D      + +   + 
Sbjct: 1  MKNIILSVLFSFCFLPLWGQKDFSQIDSLIKQLLPESSEVGISVYDLTAKKPLYDYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|148654410|ref|YP_001274615.1| beta-lactamase [Roseiflexus sp. RS-1]
 gi|148566520|gb|ABQ88665.1| beta-lactamase [Roseiflexus sp. RS-1]
          Length = 354

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          PD  +  AS+TKL TA  V   +      L  P
Sbjct: 53 PDDLFPVASITKLATALAVLRLVDRGLIALDDP 85


>gi|86742986|ref|YP_483386.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. CcI3]
 gi|86569848|gb|ABD13657.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia sp. CcI3]
          Length = 483

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 17/48 (35%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           A ++              P   ++D  +G V+ +     P  PAS  K
Sbjct: 63  AAVAARLAGPLGDPVLARPAAFVIDAQSGRVLLDVRSRIPVAPASTLK 110


>gi|49185391|ref|YP_028643.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
          anthracis str. Sterne]
 gi|49179318|gb|AAT54694.1| D-alanyl-D-alanine carboxypeptidase family protein [Bacillus
          anthracis str. Sterne]
          Length = 65

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN 45
           L  +  A++   F         +     L+D N+G V+ + 
Sbjct: 11 LLSFVITALIVLYFYLYVNGPIIQAKSAILIDANSGEVVYKK 52


>gi|86139261|ref|ZP_01057831.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. MED193]
 gi|85824105|gb|EAQ44310.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Roseobacter sp. MED193]
          Length = 502

 Score = 41.1 bits (94), Expect = 0.26,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           + +  TG  +  +  +    PAS+ K +TA     
Sbjct: 71  VAEVKTGQELESHGGEEALPPASVAKALTALYALD 105


>gi|217422704|ref|ZP_03454207.1| class D beta-lactamase [Burkholderia pseudomallei 576]
 gi|217394935|gb|EEC34954.1| class D beta-lactamase [Burkholderia pseudomallei 576]
          Length = 473

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 205 MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 260

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 261 IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 318

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 319 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 354


>gi|167743907|ref|ZP_02416681.1| class D beta-lactamase [Burkholderia pseudomallei 14]
          Length = 269

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|254300904|ref|ZP_04968348.1| class D beta-lactamase [Burkholderia pseudomallei 406e]
 gi|157811099|gb|EDO88269.1| class D beta-lactamase [Burkholderia pseudomallei 406e]
          Length = 473

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 205 MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 260

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 261 IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 318

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 319 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 354


>gi|134278795|ref|ZP_01765509.1| class D beta-lactamase [Burkholderia pseudomallei 305]
 gi|134250579|gb|EBA50659.1| class D beta-lactamase [Burkholderia pseudomallei 305]
          Length = 334

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 66  MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 121

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 122 IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 179

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 180 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 215


>gi|53723018|ref|YP_112003.1| beta-lactamase precursor [Burkholderia pseudomallei K96243]
 gi|167821090|ref|ZP_02452770.1| class D beta-lactamase [Burkholderia pseudomallei 91]
 gi|167850929|ref|ZP_02476437.1| class D beta-lactamase [Burkholderia pseudomallei B7210]
 gi|167924042|ref|ZP_02511133.1| class D beta-lactamase [Burkholderia pseudomallei BCC215]
 gi|226830803|ref|YP_001076749.2| class D beta-lactamase [Burkholderia pseudomallei 1106a]
 gi|242312563|ref|ZP_04811580.1| class D beta-lactamase [Burkholderia pseudomallei 1106b]
 gi|254184629|ref|ZP_04891218.1| class D beta-lactamase [Burkholderia pseudomallei 1655]
 gi|254193984|ref|ZP_04900416.1| class D beta-lactamase [Burkholderia pseudomallei S13]
 gi|45771832|emb|CAG15145.1| class D beta-lactamase precursor [Burkholderia pseudomallei]
 gi|52213432|emb|CAH39475.1| beta-lactamase precursor [Burkholderia pseudomallei K96243]
 gi|99644499|emb|CAK22313.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|169650735|gb|EDS83428.1| class D beta-lactamase [Burkholderia pseudomallei S13]
 gi|184215221|gb|EDU12202.1| class D beta-lactamase [Burkholderia pseudomallei 1655]
 gi|210148321|gb|ABN92836.2| class D beta-lactamase [Burkholderia pseudomallei 1106a]
 gi|223469164|gb|ACM89981.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|242135802|gb|EES22205.1| class D beta-lactamase [Burkholderia pseudomallei 1106b]
          Length = 269

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|167829450|ref|ZP_02460921.1| class D beta-lactamase [Burkholderia pseudomallei 9]
 gi|167916207|ref|ZP_02503298.1| class D beta-lactamase [Burkholderia pseudomallei 112]
 gi|226197001|ref|ZP_03792579.1| class D beta-lactamase [Burkholderia pseudomallei Pakistan 9]
 gi|45502119|emb|CAF74882.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|225930984|gb|EEH26993.1| class D beta-lactamase [Burkholderia pseudomallei Pakistan 9]
          Length = 269

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|34558799|gb|AAQ75144.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Alvinella pompejana epibiont 6C6]
          Length = 470

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 11/74 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPF-----------LSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
          MR+ + ++ + +  +   +            SI  +       +   ++G  IA      
Sbjct: 1  MRRIISVVTLILSLSYSLYGDIPYELEYRISSIPLSKDSYSIYIKGLDSGQEIASWNTYR 60

Query: 50 PWNPASLTKLMTAY 63
             PAS+ KL+T Y
Sbjct: 61 AMKPASVIKLLTTY 74


>gi|21262146|emb|CAD32564.1| beta-lactamase [Burkholderia pseudomallei]
          Length = 269

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|60416709|emb|CAI43419.1| beta-lactamase [Klebsiella oxytoca]
          Length = 290

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 77/285 (27%), Gaps = 24/285 (8%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K         +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKADLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F   + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFALSIGDVTFRLDRMEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 246 NDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 290


>gi|219920967|emb|CAQ76661.1| beta-lactamase [Klebsiella oxytoca]
          Length = 269

 Score = 41.1 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 70/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKHSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K         +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKADLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F Q + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFAQSIGDVTFRLDRMEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     +   L+ V 
Sbjct: 246 NDIAVIWPENHAPLVLVT 263


>gi|310822159|ref|YP_003954517.1| d-alanyl-d-alanine
          carboxypeptidase/d-alanyl-d-alanine-endopeptidase
          [Stigmatella aurantiaca DW4/3-1]
 gi|309395231|gb|ADO72690.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Stigmatella aurantiaca DW4/3-1]
          Length = 493

 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
            +I +   L    ++D  TG  +  +       PAS  KL
Sbjct: 38 LAAIEQEGALAGALVVDAQTGRALFAHRERVRLLPASTMKL 78


>gi|300813348|ref|ZP_07093699.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512491|gb|EFK39640.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 262

 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 62/217 (28%), Gaps = 4/217 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST- 101
                D     AS+ KL+    + +  K  K  L T I + K                  
Sbjct: 35  FSINEDKKVRSASMIKLLIMAEIMNQSKNGKISLDTKIKVGKKDKVGGSGILKEFDCEHE 94

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            ++   + L+I+ S N     + + +         + +N  S +L               
Sbjct: 95  FSIKELMTLMIIVSDNQATNILIDLVGMDNINLMGKRLNLKSASLQRKMMDIKALE--KG 152

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
             +Y +A D+ ++  +I           ++    +  +                  KTG 
Sbjct: 153 RDNYISAIDVKVILEKIYRKTLVDEKSSELMLDILLRQHERQRLGRFLDEEVKIASKTGD 212

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
                 +     ++    ++ V++     N   + + 
Sbjct: 213 LDKLENDGGIFFLENKNYILVVLIDDAVTNAMAQETI 249


>gi|254192965|ref|ZP_04899400.1| class A beta-lactamase [Burkholderia pseudomallei S13]
 gi|254263137|ref|ZP_04954002.1| class A beta-lactamase [Burkholderia pseudomallei 1710a]
 gi|169649719|gb|EDS82412.1| class A beta-lactamase [Burkholderia pseudomallei S13]
 gi|254214139|gb|EET03524.1| class A beta-lactamase [Burkholderia pseudomallei 1710a]
          Length = 314

 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLMALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|134279267|ref|ZP_01765980.1| class A beta-lactamase [Burkholderia pseudomallei 305]
 gi|254300312|ref|ZP_04967758.1| class A beta-lactamase [Burkholderia pseudomallei 406e]
 gi|134249686|gb|EBA49767.1| class A beta-lactamase [Burkholderia pseudomallei 305]
 gi|157810222|gb|EDO87392.1| class A beta-lactamase [Burkholderia pseudomallei 406e]
          Length = 314

 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLMALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|17066638|gb|AAL35334.1|AF441237_1 beta-lactamase precursor 1b [Burkholderia pseudomallei]
          Length = 295

 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLMALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|76819356|ref|YP_337703.1| beta-lactamase [Burkholderia pseudomallei 1710b]
 gi|76583829|gb|ABA53303.1| beta-lactamase [Burkholderia pseudomallei 1710b]
          Length = 309

 Score = 40.7 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 25  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 83

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 84  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 143

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 144 AATLQYSDNTAANLLMALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 203

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 204 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 263

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 264 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 295


>gi|296138289|ref|YP_003645532.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Tsukamurella paurometabola DSM
           20162]
 gi|296026423|gb|ADG77193.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Tsukamurella paurometabola DSM
           20162]
          Length = 456

 Score = 40.7 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 14/45 (31%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
                             + D  +G V+ E     P  PAS TK+
Sbjct: 76  AQIAAALQNPDLGDFTGVIADAASGGVLWERDAARPRTPASTTKV 120


>gi|89890798|ref|ZP_01202307.1| beta-lactamase [Flavobacteria bacterium BBFL7]
 gi|89516943|gb|EAS19601.1| beta-lactamase [Flavobacteria bacterium BBFL7]
          Length = 508

 Score = 40.7 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 24/103 (23%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-YYTLLD----------TNTGHVIAEN---- 45
           M++  +++ +  ++         +        T+ D             G ++ E     
Sbjct: 1   MKKLFILLFLFAVTTSIAQDVDLKELDTYISKTVKDWGIPGVSVGIVKDGEIVFEKGYGV 60

Query: 46  ---------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                         +  AS TK  TA ++   ++E K      
Sbjct: 61  MEVGKRKSPDEHTLYAIASNTKAFTAAIIAQLVEEGKLNWDDK 103


>gi|311068404|ref|YP_003973327.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
 gi|310868921|gb|ADP32396.1| D-alanyl-D-alanine carboxypeptidase [Bacillus atrophaeus 1942]
          Length = 494

 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +TG ++ ++  D    PAS  KL TA    
Sbjct: 65 ADTGDILYDHLGDTRLRPASNMKLFTAAAAL 95


>gi|237746307|ref|ZP_04576787.1| beta-lactamase [Oxalobacter formigenes HOxBLS]
 gi|229377658|gb|EEO27749.1| beta-lactamase [Oxalobacter formigenes HOxBLS]
          Length = 300

 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 11/74 (14%)

Query: 17 FPFLSIAETNKLPY-YTL--------LDTNTG--HVIAENYPDHPWNPASLTKLMTAYVV 65
                A   +      +        +   +G   V A +  D P+   S+ K   A  V
Sbjct: 1  MAQPPEAPALQAKVDAIVKQTQAEVGVAIESGGSAVKAAHNADKPFPMQSVVKFPVALAV 60

Query: 66 FSFLKEKKAMLTTP 79
             + + +  L  P
Sbjct: 61 LDSVDKGRLNLDDP 74


>gi|116496193|ref|YP_807927.1| Beta-lactamase class A [Lactobacillus casei ATCC 334]
 gi|116106343|gb|ABJ71485.1| Beta-lactamase class A [Lactobacillus casei ATCC 334]
          Length = 261

 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 7/216 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
            +  L+  +T HV+     D P+  ASL KL  A  V     +  + L     ++   S 
Sbjct: 20  KHALLV-ADTRHVLFGAQVDQPFPAASLIKLGIAAFVKEKAADDPSQL--ERQVTLPESV 76

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                  F       + + L L++  S N    A+  +           +      + L 
Sbjct: 77  GGAGILRFMSPQAWRVRDLLTLMLTVSDNLATNALLTTYGL--PTIAAWLTRHYPGVQLR 134

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                +          + A  +         + P      Q    +    K       + 
Sbjct: 135 RPLMQSTFDGDNMITASAAWQLLRALLMSDGNEPAADICAQALRHQQNRTKLL-LAPTME 193

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            F+G    KTG       +    A    + L AV+L
Sbjct: 194 NFVGWLAGKTGELPHCEHDAACFAA-EGERLYAVVL 228


>gi|223984874|ref|ZP_03634981.1| hypothetical protein HOLDEFILI_02280 [Holdemania filiformis DSM
           12042]
 gi|223963167|gb|EEF67572.1| hypothetical protein HOLDEFILI_02280 [Holdemania filiformis DSM
           12042]
          Length = 688

 Score = 40.7 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 37/119 (31%), Gaps = 42/119 (35%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPY---------------------------YTL 33
           M+++  ++A+ ++++          +  P                            Y L
Sbjct: 1   MKKWKCLLALLIMASGCTAQPQPTPSSEPAPDTAGLTQTADQLAEMLVSQLGAASVQYAL 60

Query: 34  LDTNTGHVI-------AENY------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +D +T  ++                  D  +   S++K+ TA  V    +E K  L  P
Sbjct: 61  MDGDT--ILVSGQRGVFAKGSDQALSADDQYAIGSVSKMFTAAAVMKLQEEGKLKLDQP 117


>gi|237509490|ref|ZP_04522205.1| class D beta-lactamase [Burkholderia pseudomallei MSHR346]
 gi|235001695|gb|EEP51119.1| class D beta-lactamase [Burkholderia pseudomallei MSHR346]
          Length = 473

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 205 MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCGRRASPASTFK 260

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 261 IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 318

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 319 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 354


>gi|254185849|ref|ZP_04892367.1| class D beta-lactamase [Burkholderia pseudomallei Pasteur 52237]
 gi|157933535|gb|EDO89205.1| class D beta-lactamase [Burkholderia pseudomallei Pasteur 52237]
          Length = 473

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 205 MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCGRRASPASTFK 260

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 261 IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 318

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 319 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 354


>gi|167724963|ref|ZP_02408199.1| class D beta-lactamase [Burkholderia pseudomallei DM98]
 gi|167907847|ref|ZP_02495052.1| class D beta-lactamase [Burkholderia pseudomallei NCTC 13177]
 gi|99644471|emb|CAK22307.1| class D beta-lactamase [Burkholderia pseudomallei]
          Length = 269

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|167899531|ref|ZP_02486932.1| class D beta-lactamase [Burkholderia pseudomallei 7894]
 gi|254264979|ref|ZP_04955844.1| class D beta-lactamase [Burkholderia pseudomallei 1710a]
 gi|99644476|emb|CAK22308.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|99644481|emb|CAK22309.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|99644486|emb|CAK22310.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|99644491|emb|CAK22311.1| class D beta-lactamase [Burkholderia pseudomallei]
 gi|254215981|gb|EET05366.1| class D beta-lactamase [Burkholderia pseudomallei 1710a]
          Length = 269

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|76819575|ref|YP_336264.1| class D beta-lactamase [Burkholderia pseudomallei 1710b]
 gi|76584048|gb|ABA53522.1| class D beta-lactamase [Burkholderia pseudomallei 1710b]
          Length = 473

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 205 MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLLQ-DGDCGRRASPASTFK 260

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   +++       +  +          + +      + 
Sbjct: 261 IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYSVVWYSQQVAH 318

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 319 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 354


>gi|256846550|ref|ZP_05552007.1| beta-lactamase [Fusobacterium sp. 3_1_36A2]
 gi|256718319|gb|EEU31875.1| beta-lactamase [Fusobacterium sp. 3_1_36A2]
          Length = 263

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 64/213 (30%), Gaps = 6/213 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-YPPS 92
            D N  +V      D     AS  KL+    +   + E K  L+  I I+ +        
Sbjct: 27  YDLNKNNV-FSINGDKKVLSASTIKLLILAELMKKISENKFSLSDTIMIADSMKTGGDGV 85

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATH 151
                 G   TL     L+I+ S N     + + L      +  + ++     LG     
Sbjct: 86  LKELNTGHHFTLKELATLMIIVSDNQATNILIDFLGMENINQLGKELDLKETFLGRK--M 143

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                    + +YT A D+++L   +               L+I  ++            
Sbjct: 144 MDAEARKKGYDNYTCADDISLLLK-LIYQEKLINKEASQLMLDILLRQQQGERLQRYLPS 202

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                       +  N       GD++ I V+L
Sbjct: 203 DIKIAHKCGDLDNLENDGGIIWLGDRAYILVVL 235


>gi|324326508|gb|ADY21768.1| beta-lactamase [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 312

 Score = 40.7 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 60/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++T T   IA   P+  +  AS  K + A V+    +     L   IT +K         
Sbjct: 75  INTGTKQTIAYR-PNERFAFASTYKALAAGVLLQ--QNSTMKLDEVITYTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + MTL    +  +  S N     +       K  +K ++ M +         T 
Sbjct: 132 TEKHVDTGMTLGEIAEAAVRYSDNTAGNILFNKIGGPKGYEKALRQMGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIATNLKAFTAGNALPNHKRNILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WIVADKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|255964404|gb|ACU44520.1| beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 229

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAES 126
                 +  S N     +   
Sbjct: 124 ELSAAALQYSDNVAMNKLIAH 144


>gi|124022606|ref|YP_001016913.1| beta-lactamase [Prochlorococcus marinus str. MIT 9303]
 gi|123962892|gb|ABM77648.1| putative beta-lactamase [Prochlorococcus marinus str. MIT 9303]
          Length = 386

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 9/154 (5%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           +  LSN +  L+  + +      LL  + G   AE  P+     AS  K     V    +
Sbjct: 99  LTTLSNRWKDLAKQQKDLQASAFLLVLDDGR-YAELSPETALPAASSIKTAILLVALELI 157

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKK-GSTMTLDNALKLLIVKSANDIAVAIAESLC 128
              +     P+ ++K            K  GS          +I  S N     + + + 
Sbjct: 158 DSGQLSWNEPLKLTKEIIGGGAGWMASKPLGSQFPAHEVATEMIRVSDNTATNLLIQRI- 216

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
                    +N     LGLS+   +  + +    
Sbjct: 217 ----GGKDVLNARFNALGLSS--TVVNNWLPDLQ 244


>gi|90412474|ref|ZP_01220477.1| hypothetical
          D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Photobacterium profundum 3TCK]
 gi|90326511|gb|EAS42917.1| hypothetical
          D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Photobacterium profundum 3TCK]
          Length = 467

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 18/53 (33%)

Query: 13 LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            N    ++           ++D  T  V+     +    PAS  K++TA   
Sbjct: 20 AFNPQAAINKLPNGHDLALMIVDPATNQVLFSQREEQLQAPASTQKVITALAA 72


>gi|89889590|ref|ZP_01201101.1| hypothetical protein BBFL7_01407 [Flavobacteria bacterium BBFL7]
 gi|89517863|gb|EAS20519.1| hypothetical protein BBFL7_01407 [Flavobacteria bacterium BBFL7]
          Length = 314

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 57/220 (25%), Gaps = 18/220 (8%)

Query: 30  YYTLLDT-NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             +L+D  + G   A    D+    AS+ K+   Y     +++     T    +  +   
Sbjct: 66  SVSLVDLSDNGVRYASINGDNMMYAASMPKIAVLYTAMDAIEKGDLEYTDE--VKTDMWL 123

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
               ++       +      +  I     D A    +          +      +     
Sbjct: 124 MISKSNNAASTRMIDRVGFQR--IEDVMCDPANPFYDQYSNGGLWVGKRYAAQGRR---- 177

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT--NWA 206
             H     G+    H  T   +A L +++ T               +K     +   N  
Sbjct: 178 --HPEPIKGL---SHAATTEAVAKLYYQLATGQLINSDRSSEMLHYLKDPSLHHKFVNTL 232

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAIQGDQ--SLIAVIL 244
                 AD  +   +  +           ++    I V +
Sbjct: 233 DQIAPEADIYRKSGSWKNWHCDSVIVWDDERKKHYILVAM 272


>gi|30248084|ref|NP_840154.1| D-alanyl-D-alanine carboxypeptidase [Nitrosomonas europaea ATCC
          19718]
 gi|30179969|emb|CAD83964.1| D-Ala-D-Ala carboxypeptidase 3 (S13) family [Nitrosomonas
          europaea ATCC 19718]
          Length = 475

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 13/81 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT-------------LLDTNTGHVIAENYP 47
          M+ FL +  +     IFP  ++   + +                 + +      +     
Sbjct: 1  MKSFLKVAWLLWGVLIFPAYAVDLPDTVRQALKKAGIPESAVGVYVREVGADRPLVSVNA 60

Query: 48 DHPWNPASLTKLMTAYVVFSF 68
          D P NPAS+ K++T Y     
Sbjct: 61 DVPMNPASVMKIVTTYAGLEM 81


>gi|125634304|gb|ABN48406.1| beta-lactamase [Escherichia coli]
          Length = 197

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAES 126
                 +  S N     +   
Sbjct: 124 ELSAAALQYSDNVAMNKLIAH 144


>gi|14578579|gb|AAK52327.1| class A beta-lactamase precursor [Burkholderia pseudomallei]
          Length = 295

 Score = 40.7 bits (93), Expect = 0.31,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 78/264 (29%), Gaps = 18/264 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQSLIAVILGALDRN 250
           N +  A   +++ I  I+    RN
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTTRN 273


>gi|227825073|ref|ZP_03989905.1| beta-lactamase [Acidaminococcus sp. D21]
 gi|226905572|gb|EEH91490.1| beta-lactamase [Acidaminococcus sp. D21]
          Length = 284

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 74/264 (28%), Gaps = 30/264 (11%)

Query: 1   MRQFLVIIAMAMLSN------IFPFLSIAETNKLPY----------YTLLDTNTGHVIAE 44
           M++   ++  A+L+       +   +++                      D  TG     
Sbjct: 5   MKKGAALMGAALLTVTLWSTPVMAAVNVPANLAAVSKTVKGAAPYGVYFSDLKTGKGYY- 63

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMT 103
                    AS+ K+      +  +++ K  LT   T++               KG+T+T
Sbjct: 64  RNS-VQTPAASMIKVFILAAAYEDIRDGKLSLTETFTLTDKNVVAGSGVLQGMPKGTTVT 122

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ--- 160
           +  AL  +I+ S N     + + L       +  +N   K  G   T             
Sbjct: 123 VKKALDEMIIHSDNTATNLMIDRL------GMDRVNRYLKEHGYKDTTLRRKMMDFDAAK 176

Query: 161 --HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
               + TT RD+ +L  R+                  K +   +              KT
Sbjct: 177 KGAENMTTVRDVGLLFKRLYQGKCVSKDLDAQMLAIYKAQVDTDMLPDKLPKGTVVAHKT 236

Query: 219 GFTCASGFNIVASAIQGDQSLIAV 242
           G       +           ++ V
Sbjct: 237 GEVRDLRHDGGIVYTAKGDYVLVV 260


>gi|219920893|emb|CAQ76624.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 72/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+T +                 L++  +    +     D
Sbjct: 8   KSALMAAAVPLLLASGSLWASADTLQKKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K+        +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F Q + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFAQSIGDVTFRLDRMEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGGGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     +   L+ V 
Sbjct: 246 NDIAVIWPENHAPLVLVT 263


>gi|599572|dbj|BAA06252.1| beta-lactamase precursor [Proteus vulgaris]
          Length = 300

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    V    +++  +L   ITI K+        +     + MTL  
Sbjct: 67  GEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLVAYSPITEKHLTTGMTLAE 126

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I + L    K  +F + +N+ +  L         A         
Sbjct: 127 LSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 186

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +       L      D        Q+           N+  A        G KTG     
Sbjct: 187 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPKHWVVGDKTGSGDYG 246

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     +   LI V+
Sbjct: 247 TTNDIAVIWPENHAPLILVV 266


>gi|315940023|gb|ADU56222.1| extended-spectrum beta-lactamase [Escherichia coli]
 gi|315940025|gb|ADU56223.1| SHV-7 extended-spectrum beta-lactamase [Escherichia coli]
          Length = 197

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 2/136 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 36  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 96  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 155

Query: 152 FMNAHGVVQHGHYTTA 167
              A         T A
Sbjct: 156 LNEALPGDARDTTTPA 171


>gi|293364671|ref|ZP_06611392.1| penicillin-binding protein 1B [Streptococcus oralis ATCC 35037]
 gi|307702927|ref|ZP_07639875.1| penicillin-binding protein [Streptococcus oralis ATCC 35037]
 gi|291316929|gb|EFE57361.1| penicillin-binding protein 1B [Streptococcus oralis ATCC 35037]
 gi|307623607|gb|EFO02596.1| penicillin-binding protein [Streptococcus oralis ATCC 35037]
          Length = 833

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 15/134 (11%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 434 VLMDNQTGAILGFVGGRNYQKNQNNHAIDTKRSPASTTKPILAYSIAIDQGLMGSASILS 493

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               + +        ++   G     +       + +                K +++ M
Sbjct: 494 NYPTNFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 551

Query: 139 NNTSKNLGLSATHF 152
                  G+ +   
Sbjct: 552 GYEIPEYGIESLPM 565


>gi|273161406|gb|ACZ97628.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 196

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 2/136 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 26  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 85

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 86  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 145

Query: 152 FMNAHGVVQHGHYTTA 167
              A         T A
Sbjct: 146 LNEALPGDARDTTTPA 161


>gi|273161403|gb|ACZ97627.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 163

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 2/136 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 26  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 85

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 86  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 145

Query: 152 FMNAHGVVQHGHYTTA 167
              A         T A
Sbjct: 146 LNEALPGDARDTTTPA 161


>gi|273161400|gb|ACZ97626.1| SHV-1 beta-lactamase [Klebsiella pneumoniae]
          Length = 211

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 36/136 (26%), Gaps = 2/136 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 25  MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 84

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N  A  +            F++ + +    L    T 
Sbjct: 85  SEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETE 144

Query: 152 FMNAHGVVQHGHYTTA 167
              A         T A
Sbjct: 145 LNEALPGDARDTTTPA 160


>gi|258573097|ref|XP_002540730.1| beta-lactamase [Uncinocarpus reesii 1704]
 gi|237900996|gb|EEP75397.1| beta-lactamase [Uncinocarpus reesii 1704]
          Length = 401

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           D     ASLTKLMT+      ++     L  
Sbjct: 52 EDDIMAVASLTKLMTSIAALQCVERGLIKLDD 83


>gi|33240595|ref|NP_875537.1| Beta-lactamase class A [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33238123|gb|AAQ00190.1| Beta-lactamase class A [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 345

 Score = 40.7 bits (93), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 3/115 (2%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
             K   Y LL+   G   AE   +     AS  K+    +    +   +      +T++K
Sbjct: 90  ALKASGYVLLE--DGR-YAELNSNQIAPAASTIKIPILLICLKMVGSGELKWNEKVTLTK 146

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +          ++        + +   +++ +++ A  +            Q  N
Sbjct: 147 DDVAEGSGWIRYQPLGKEFFIHEIATEMIRVSDNTATNLLIRKIGGINTINQRFN 201


>gi|225857672|ref|YP_002739183.1| penicillin-binding protein 1B [Streptococcus pneumoniae P1031]
 gi|225725409|gb|ACO21261.1| penicillin-binding protein 1B [Streptococcus pneumoniae P1031]
          Length = 821

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 40/145 (27%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +      ++        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYSLLRENGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|84385766|ref|ZP_00988796.1| beta-lactamase [Vibrio splendidus 12B01]
 gi|84379082|gb|EAP95935.1| beta-lactamase [Vibrio splendidus 12B01]
          Length = 319

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 74/258 (28%), Gaps = 16/258 (6%)

Query: 1   MRQF----LVIIAMAMLSNIFPFLSIAETN-------KLP-YYTLLDTNTGHVIAENYPD 48
           M+++    LV+++    ++        E+               + D+ T         D
Sbjct: 33  MKKYTSLALVLLSAFFSTSSLSHSLDPESIEQIEFRVSARIGVAVYDSATEQT-WSYKGD 91

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K +    +    + +   L + + +  +        +    G  ++L  A 
Sbjct: 92  ERFPMMSTFKTLACANLLYDHENEGLYLESKVGVKSDELIAWSPMTKAFVGKEISLTGAC 151

Query: 109 KLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +   +       +F++ + +    L        +A    +    T 
Sbjct: 152 AATMEMSDNTAANIVLAGIDGPNGLTEFLRSIGDRETRLDHIEPDLNHARPGDERDTTTP 211

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
              +  L+  +  +        Q+K   +  K       ++         ++G       
Sbjct: 212 NTMVKTLNELVYGNVLSEESKAQLKTWMMDNKVSDGMIRSILPDGWNIADRSGAGAYGSR 271

Query: 227 NIVASAIQGDQ-SLIAVI 243
            I A      +  LI  I
Sbjct: 272 AITAIVWSETRAPLIISI 289


>gi|295133225|ref|YP_003583901.1| Beta-lactamase class C family protein [Zunongwangia profunda
           SM-A87]
 gi|294981240|gb|ADF51705.1| Beta-lactamase class C family protein [Zunongwangia profunda
           SM-A87]
          Length = 364

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 24/103 (23%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT--LLDTN-TGHVIAENY----------- 46
           ++ F ++I + +        + + T+++  Y   L D+  +G ++  +            
Sbjct: 3   IKAFFLLIPVVLFLASTKTYAQSITSQIENYLDNLKDSEFSGTILVAHNDTIIAKRAYGL 62

Query: 47  ----------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                      +  +N AS+TK+ TA  V    +++K  L  P
Sbjct: 63  ASIEYDVKNQIETKFNIASITKMFTAVAVLQLFEQRKIALNKP 105


>gi|21262148|emb|CAD32565.1| beta-lactamase [Burkholderia pseudomallei]
          Length = 269

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 45/156 (28%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG ++ +   D     +PAS  K
Sbjct: 1   MKFRHALSSAFVLLGCIAASAHAKTICTAIA---DAGTGKLLVQ-DGDCGRRASPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA--LKLLIVKSA 116
           +  + + +     +      P+   +++       +  +            +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHDPVLPYRDSYIAWGGEAWKQPTDPTRWLKYPVVWYSQQVAH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A   A+              +  +N GL     
Sbjct: 115 HLGAQRFAQYAKAFGYGNADVSGDPGQNNGLDRAWI 150


>gi|302379859|ref|ZP_07268342.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312337|gb|EFK94335.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
           ACS-171-V-Col3]
          Length = 312

 Score = 40.7 bits (93), Expect = 0.33,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 82/251 (32%), Gaps = 18/251 (7%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL------MTAYVVFSFLKEKKAMLTTPI 80
               +++ D +    +           ASL+KL      +T   +   ++  + +L    
Sbjct: 58  DALAFSVYDIDKEKYLFYEGGGQLPTVASLSKLFAIDYALTKVKLEDSIEVNQGLLDLVP 117

Query: 81  TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHM 138
             S  A   P   +  +    M + +        + N     + +     K    FV+++
Sbjct: 118 QGSSMAHLKPGKYTAEQIMQAMLVPSGNDAAFALAYNIGKKDLGDGYSAKKYVNHFVKNL 177

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYM---HYFQIKGLEI 195
           +    + G + TH  +  G       T  +D+  ++ ++             +       
Sbjct: 178 SKYLADEGYNKTHLFDPSGF-STQADTNLKDINRVALKLIDYDFVKKCMGKSYFTIQTPQ 236

Query: 196 KGKKYPNTN-----WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
               + NTN      +        G+KTG T AS +NIV    +  +  +   L +    
Sbjct: 237 GEMNWKNTNEFLDPKSAFYNKDVKGIKTG-TMASSYNIVVLYEKNGKKYLITCLASHTNE 295

Query: 251 TRNKVSASLLS 261
            R K   + ++
Sbjct: 296 DRYKAVQAAIN 306


>gi|271970369|ref|YP_003344565.1| beta-lactamase [Streptosporangium roseum DSM 43021]
 gi|270513544|gb|ACZ91822.1| beta-lactamase [Streptosporangium roseum DSM 43021]
          Length = 635

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA 74
                +S         Y + D +TG  +        + PAS+ KL+TA  V   +++ + 
Sbjct: 61  AAIAVVSGGRQVFAQGYGVADVDTGRPVDA--EQTVFAPASVAKLITATAVMQLVEKGRI 118

Query: 75  MLT 77
            L 
Sbjct: 119 DLD 121


>gi|229020249|ref|ZP_04177019.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
 gi|228741042|gb|EEL91270.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
          Length = 85

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYN 266
                A G K+G +    + +V    +  + +I V+L +  R      +  +    F  
Sbjct: 26  YDDPYAIGSKSGLSALGKYTVVTVDEKDGKRVINVVL-SSTRTQLYPDTKKMAHYAFKQ 83


>gi|219920971|emb|CAQ76663.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 70/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKHSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K         +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKADLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     I   L   EK   F Q + + +  L        +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKIIGYLGGPEKVTAFAQSIGDVTFRLDRMEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     +   L+ V 
Sbjct: 246 NDIAVIWPENHAPLVLVT 263


>gi|48477087|ref|YP_022793.1| D-Ala-D-Ala carboxypeptidase 3 [Picrophilus torridus DSM 9790]
 gi|48429735|gb|AAT42600.1| D-Ala-D-Ala carboxypeptidase 3 [Picrophilus torridus DSM 9790]
          Length = 323

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 37 NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           +G V+     D P  PAS  K++TA +   ++K
Sbjct: 11 KSGRVLRSFNMDLPLMPASNMKIVTAILAMRYIK 44


>gi|89075780|ref|ZP_01162168.1| beta-lactamase [Photobacterium sp. SKA34]
 gi|89048512|gb|EAR54087.1| beta-lactamase [Photobacterium sp. SKA34]
          Length = 287

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 70/254 (27%), Gaps = 15/254 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP----------YYTLLDTNTGHVIAENYPDHP 50
           M++F +   +++ S     L+      L              + D+ T         +  
Sbjct: 1   MKKFFLFTLISLCSC--SVLASELNITLRQMEKQIDGNIGVAVFDSQTNTS-WNFNGNKR 57

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S  K +    V   +++ K  LT  I ++K         +    G  M+L++    
Sbjct: 58  FPMMSAFKTLACANVLYDVQQHKLSLTNKIKVTKAGLINWNPVTQNFVGGQMSLNSVCGA 117

Query: 111 LIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            ++ S N  A              KF++ + + +  L              ++   T   
Sbjct: 118 AMLMSDNYAANLALGQVGGPHGVTKFLRMIGDKTTRLDHFEPKLNYVEKGAENDTTTPIA 177

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
            M  +   +           Q+K              AV         ++G        +
Sbjct: 178 MMNTIKKLLTGKVLDSESKVQLKFWMTNNMVSDGLARAVLPTGWKIADRSGGGVNGSRTL 237

Query: 229 VASAIQGDQSLIAV 242
            A         + +
Sbjct: 238 TAMVWNKHHQPLFI 251


>gi|262195431|ref|YP_003266640.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Haliangium ochraceum DSM 14365]
 gi|262078778|gb|ACY14747.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
          anine-endopeptidase [Haliangium ochraceum DSM 14365]
          Length = 514

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 9  AMAMLSNIFPFLS-IAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
          A+++ + I   L+  A          + D  TG V+      + +N AS+TK++T 
Sbjct: 43 ALSLGARIDALLAGHAPLTDARVGIFVQDLGTGAVLYAREAGNSFNVASVTKVITM 98


>gi|219920921|emb|CAQ76638.1| beta-lactamase [Klebsiella oxytoca]
          Length = 274

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 72/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           R  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   RSALMAAAVPLLLASGSLWASADAIQQKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K+        +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     +   L   EK   F Q + + +  L  +     +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     +   L+ V 
Sbjct: 246 NDIAVIWPENHAPLVLVT 263


>gi|260914824|gb|ACX54273.1| beta-lactamase blaCTX-M-5 [Enterobacter cloacae]
          Length = 241

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 50/186 (26%), Gaps = 4/186 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +   L   +K   F + + + +  L  +     
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 174 TAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWG 233

Query: 214 DGMKTG 219
            G KTG
Sbjct: 234 VGDKTG 239


>gi|256833321|ref|YP_003162048.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-
           alanine-endopeptidase [Jonesia denitrificans DSM 20603]
 gi|256686852|gb|ACV09745.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-
           alanine-endopeptidase [Jonesia denitrificans DSM 20603]
          Length = 476

 Score = 40.7 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 13  LSNIFPFLSIAETNKLPYYTLL--DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++ +   L+  +    P   ++  DT TG  I     D P   AS+ K++T      
Sbjct: 78  IATLAAKLAKNKDTLGPSVAVVVSDTFTGDPITAVNADTPIVAASVQKILTGLAAMD 134


>gi|291044566|ref|ZP_06570275.1| penicillin-binding protein 3 [Neisseria gonorrhoeae DGI2]
 gi|291011460|gb|EFE03456.1| penicillin-binding protein 3 [Neisseria gonorrhoeae DGI2]
          Length = 501

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 65  AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 102


>gi|268596147|ref|ZP_06130314.1| penicillin binding protein 3 [Neisseria gonorrhoeae FA19]
 gi|268549935|gb|EEZ44954.1| penicillin binding protein 3 [Neisseria gonorrhoeae FA19]
          Length = 482

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 46 AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 83


>gi|268594095|ref|ZP_06128262.1| penicillin binding protein 3 [Neisseria gonorrhoeae 35/02]
 gi|268547484|gb|EEZ42902.1| penicillin binding protein 3 [Neisseria gonorrhoeae 35/02]
          Length = 482

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 46 AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 83


>gi|240013423|ref|ZP_04720336.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae DGI18]
 gi|240015864|ref|ZP_04722404.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae FA6140]
 gi|240080005|ref|ZP_04724548.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae FA19]
 gi|240112212|ref|ZP_04726702.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae MS11]
 gi|240114956|ref|ZP_04729018.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae PID18]
 gi|240117242|ref|ZP_04731304.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae PID1]
 gi|240120494|ref|ZP_04733456.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae PID24-1]
 gi|240122794|ref|ZP_04735750.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae PID332]
 gi|240127502|ref|ZP_04740163.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae SK-93-1035]
 gi|260441228|ref|ZP_05795044.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae DGI2]
 gi|268598272|ref|ZP_06132439.1| peptidase [Neisseria gonorrhoeae MS11]
 gi|268600624|ref|ZP_06134791.1| peptidase [Neisseria gonorrhoeae PID18]
 gi|268602934|ref|ZP_06137101.1| peptidase [Neisseria gonorrhoeae PID1]
 gi|268681407|ref|ZP_06148269.1| peptidase [Neisseria gonorrhoeae PID332]
 gi|268685876|ref|ZP_06152738.1| peptidase [Neisseria gonorrhoeae SK-93-1035]
 gi|268582403|gb|EEZ47079.1| peptidase [Neisseria gonorrhoeae MS11]
 gi|268584755|gb|EEZ49431.1| peptidase [Neisseria gonorrhoeae PID18]
 gi|268587065|gb|EEZ51741.1| peptidase [Neisseria gonorrhoeae PID1]
 gi|268621691|gb|EEZ54091.1| peptidase [Neisseria gonorrhoeae PID332]
 gi|268626160|gb|EEZ58560.1| peptidase [Neisseria gonorrhoeae SK-93-1035]
          Length = 469

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 70


>gi|239998239|ref|ZP_04718163.1| Penicillin-binding protein 3 [Neisseria gonorrhoeae 35/02]
 gi|240124988|ref|ZP_04737874.1| Penicillin-binding protein 3 [Neisseria gonorrhoeae SK-92-679]
          Length = 508

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 72  AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 109


>gi|254493018|ref|ZP_05106189.1| peptidase [Neisseria gonorrhoeae 1291]
 gi|226512058|gb|EEH61403.1| peptidase [Neisseria gonorrhoeae 1291]
          Length = 469

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 70


>gi|194097735|ref|YP_002000776.1| Penicillin-binding protein 3 [Neisseria gonorrhoeae NCCP11945]
 gi|293397692|ref|ZP_06641898.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           (penicillin binding protein 4) [Neisseria gonorrhoeae
           F62]
 gi|193933025|gb|ACF28849.1| Penicillin-binding protein 3 [Neisseria gonorrhoeae NCCP11945]
 gi|291611638|gb|EFF40707.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           (penicillin binding protein 4) [Neisseria gonorrhoeae
           F62]
          Length = 508

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 72  AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 109


>gi|167897913|ref|ZP_02485315.1| class A beta-lactamase [Burkholderia pseudomallei 7894]
          Length = 314

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|167922472|ref|ZP_02509563.1| class A beta-lactamase [Burkholderia pseudomallei BCC215]
 gi|254356954|ref|ZP_04973229.1| class A beta-lactamase [Burkholderia mallei 2002721280]
 gi|148025981|gb|EDK84104.1| class A beta-lactamase [Burkholderia mallei 2002721280]
          Length = 309

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 25  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 83

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 84  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 143

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 144 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 203

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 204 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 263

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 264 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 295


>gi|121597865|ref|YP_989868.1| class A beta-lactamase [Burkholderia mallei SAVP1]
 gi|124382274|ref|YP_001024343.1| class A beta-lactamase [Burkholderia mallei NCTC 10229]
 gi|126446647|ref|YP_001078232.1| class A beta-lactamase [Burkholderia mallei NCTC 10247]
 gi|167003542|ref|ZP_02269328.1| class A beta-lactamase [Burkholderia mallei PRL-20]
 gi|167819468|ref|ZP_02451148.1| class A beta-lactamase [Burkholderia pseudomallei 91]
 gi|167827839|ref|ZP_02459310.1| class A beta-lactamase [Burkholderia pseudomallei 9]
 gi|226197718|ref|ZP_03793293.1| class A beta-lactamase [Burkholderia pseudomallei Pakistan 9]
 gi|238563350|ref|ZP_00438999.2| beta-lactamase [Burkholderia mallei GB8 horse 4]
 gi|254174390|ref|ZP_04881052.1| class A beta-lactamase [Burkholderia mallei ATCC 10399]
 gi|254190047|ref|ZP_04896556.1| class A beta-lactamase [Burkholderia pseudomallei Pasteur 52237]
 gi|121225663|gb|ABM49194.1| class A beta-lactamase [Burkholderia mallei SAVP1]
 gi|124290294|gb|ABM99563.1| class A beta-lactamase [Burkholderia mallei NCTC 10229]
 gi|126239501|gb|ABO02613.1| class A beta-lactamase [Burkholderia mallei NCTC 10247]
 gi|157937724|gb|EDO93394.1| class A beta-lactamase [Burkholderia pseudomallei Pasteur 52237]
 gi|160695436|gb|EDP85406.1| class A beta-lactamase [Burkholderia mallei ATCC 10399]
 gi|225930327|gb|EEH26339.1| class A beta-lactamase [Burkholderia pseudomallei Pakistan 9]
 gi|238520861|gb|EEP84317.1| beta-lactamase [Burkholderia mallei GB8 horse 4]
 gi|243060943|gb|EES43129.1| class A beta-lactamase [Burkholderia mallei PRL-20]
          Length = 314

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|3249049|gb|AAC24040.1| penicillin binding protein 3 [Neisseria gonorrhoeae]
          Length = 469

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 70


>gi|59800568|ref|YP_207280.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae FA 1090]
 gi|268683574|ref|ZP_06150436.1| peptidase [Neisseria gonorrhoeae SK-92-679]
 gi|59717463|gb|AAW88868.1| putative carboxypeptidase, penicillin binding protein [Neisseria
          gonorrhoeae FA 1090]
 gi|268623858|gb|EEZ56258.1| peptidase [Neisseria gonorrhoeae SK-92-679]
 gi|317163525|gb|ADV07066.1| Penicillin-binding protein 3 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 469

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             + + ++G VI ++    P NPAS  KL+TA+  F 
Sbjct: 33 AVYVQELDSGKVIIDHRAGIPVNPASTMKLVTAFAAFK 70


>gi|53716878|ref|YP_105905.1| class A beta-lactamase [Burkholderia mallei ATCC 23344]
 gi|53721970|ref|YP_110955.1| beta-lactamase precursor [Burkholderia pseudomallei K96243]
 gi|17066642|gb|AAL35336.1|AF441239_1 beta-lactamase precursor 1d [Burkholderia pseudomallei]
 gi|14578569|gb|AAK52322.1| class A beta-lactamase precursor [Burkholderia mallei]
 gi|14578571|gb|AAK52323.1| class A beta-lactamase precursor [Burkholderia pseudomallei]
 gi|14578575|gb|AAK52325.1| class A beta-lactamase precursor [Burkholderia pseudomallei]
 gi|14578577|gb|AAK52326.1| class A beta-lactamase precursor [Burkholderia pseudomallei]
 gi|52212384|emb|CAH38409.1| beta-lactamase precursor [Burkholderia pseudomallei K96243]
 gi|52422848|gb|AAU46418.1| class A beta-lactamase [Burkholderia mallei ATCC 23344]
 gi|223469162|gb|ACM89980.1| class A beta-lactamase [Burkholderia pseudomallei]
          Length = 295

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|326384093|ref|ZP_08205776.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326197253|gb|EGD54444.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 448

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + D  TG V+       P  PAS  K++TA  V   L  
Sbjct: 84  VSDPLTGQVLWSQGAAEPRVPASNAKILTASAVLLALPH 122


>gi|213965145|ref|ZP_03393343.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium amycolatum SK46]
 gi|213952259|gb|EEB63643.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium amycolatum SK46]
          Length = 498

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 7/81 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +S I    +        +  + D  TG  +          PAS  K++TA          
Sbjct: 97  VSAIMDAAAADPAFGELHGIVSDATTGQKLWGINDTAVAMPASSMKILTASAAL------ 150

Query: 73  KAMLTTPITISKNASEYPPSN 93
              L     +S   S    +N
Sbjct: 151 -LDLGEDHRVSTRVSRVTGTN 170


>gi|84494846|ref|ZP_00993965.1| beta-lactamase related protein [Janibacter sp. HTCC2649]
 gi|84384339|gb|EAQ00219.1| beta-lactamase related protein [Janibacter sp. HTCC2649]
          Length = 278

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 22/46 (47%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          ++D  +G V+A + PD   + AS+ K+     +   L++ +     
Sbjct: 27 IVDLGSGEVLASHDPDRLLSTASVGKVFALIELAERLRDGRLAADQ 72


>gi|313675426|ref|YP_004053422.1| d-alanyl-d-alanine carboxypeptidase [Marivirga tractuosa DSM 4126]
 gi|312942124|gb|ADR21314.1| putative D-alanyl-D-alanine carboxypeptidase [Marivirga tractuosa
           DSM 4126]
          Length = 362

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 18/168 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTG-------------HVIAENYP 47
           +++ L+I +  +L     F       K     ++D   G              V+AE+  
Sbjct: 2   LKKTLIIGSAIILILSAGFGVAFFMVKPDKERIVDFIRGNPDRISISLSQNEKVLAEHNE 61

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
                 AS  K++ A        E K      +++S     + P+       + +     
Sbjct: 62  IKMLPLASTVKIIIAIEYAYQAAEGKLNPDQKLSVSDLKKYHYPATDGGAHRAWLNNLEL 121

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHM-----NNTSKNLGLSAT 150
            K   V         I  S     +  +  +     N+  K LG+   
Sbjct: 122 EKDSSVSLWEIAKGMINYSSNANTEYLIDLLGLENINSRIKLLGIEKH 169


>gi|254927435|gb|ACT85950.1| beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 223

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAES 126
                 +  S N     +   
Sbjct: 124 ELSAAALQYSDNVAMNKLIAH 144


>gi|300775566|ref|ZP_07085427.1| possible penicillin-binding protein [Chryseobacterium gleum ATCC
           35910]
 gi|300505593|gb|EFK36730.1| possible penicillin-binding protein [Chryseobacterium gleum ATCC
           35910]
          Length = 506

 Score = 40.7 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 23/111 (20%)

Query: 2   RQFLVIIAMAMLSNIFP---------FLSIAETNKLPYYTLLDTNTGHVIAENY------ 46
           + F +++ +    +            F + AE        L+      ++ +        
Sbjct: 19  KVFFILMCLIGPLSFLQSQTTKLDSYFSAKAEQGDFNGVILV-AEKNKILYQKAFGFADF 77

Query: 47  -------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
                      +   S+TKL+TA  V   + +K      P+    +   YP
Sbjct: 78  ENKVPNTIHTRFPIGSITKLLTATAVLQLVDKKLLEPDKPVKFYLHEFPYP 128


>gi|146387176|pdb|2UWY|A Chain A, Active Site Restructuring Regulates Ligand Recognition In
           Class A Penicillin-Binding Proteins
 gi|146387177|pdb|2UWY|B Chain B, Active Site Restructuring Regulates Ligand Recognition In
           Class A Penicillin-Binding Proteins
 gi|296863372|pdb|2XD1|A Chain A, Active Site Restructuring Regulates Ligand Recognition In
           Class A Penicillin-Binding Proteins
 gi|296863373|pdb|2XD1|B Chain B, Active Site Restructuring Regulates Ligand Recognition In
           Class A Penicillin-Binding Proteins
          Length = 494

 Score = 40.7 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 128 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 187

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 188 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 245

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 246 GYEIPEYGIESLPMGGGIEVTVAQH 270


>gi|123442290|ref|YP_001006271.1| beta-lactamase precursor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089251|emb|CAL12097.1| beta-lactamase precursor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 294

 Score = 40.7 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 55/207 (26%), Gaps = 5/207 (2%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
            ++        +   S  K M A  V    + +  +L   I   ++        +     
Sbjct: 62  KILY-RGA-QRFPFCSTFKFMLAAAVLDQSQSQPNLLNKHINYHESDLLSYAPITRKNLA 119

Query: 100 STMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
             MT+       I  S N  A  + +         +F + + +    L         A  
Sbjct: 120 CGMTVSELCAATIQYSDNTAANLLIKELGGLAAVNQFARSIGDQMFRLDRWEPDLNTALP 179

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
                  T A   A ++  +  D  +     Q+            T  A        G K
Sbjct: 180 NDPRDTTTPAAMAASMNKLVLGDALRPAQRSQLAAWLKGNTTGDATIRAGAPTDWIVGDK 239

Query: 218 TGF-TCASGFNIVASAIQGDQSLIAVI 243
           TG     +  +I          ++ V+
Sbjct: 240 TGSGDYGTTNDIAVLWPTKGAPIVLVV 266


>gi|46244166|gb|AAP93847.1| beta-lactamase [Enterobacter cloacae]
          Length = 152

 Score = 40.7 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 26/90 (28%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G  +A    D  +   S  K++    V + +      L   I   +         
Sbjct: 36  MDLASGRTLAAWRADERFPMVSTFKVLLCGAVLARVDAGLEQLDRRIHYRQQDLVDYSPV 95

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           S       MT+       I  S N     +
Sbjct: 96  SEKHLTDGMTIGELCAAAITLSDNCAGNLL 125


>gi|522105|dbj|BAA07084.1| Pre BlaB Protein [Proteus vulgaris]
          Length = 300

 Score = 40.7 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    V    +++  +L   ITI K+        +     + MTL  
Sbjct: 67  GEERFAMASTSKVMAVAAVLKASEKQAGLLDKNITIKKSDLVAYSPITEKHLTTGMTLAE 126

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I + L    K  +F + +N+ +  L         A         
Sbjct: 127 LSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 186

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +       L      D        Q+           N+  A        G KTG     
Sbjct: 187 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPKHWVVGDKTGSGDYG 246

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     +   LI V+
Sbjct: 247 TTNDIAVIWPENHAPLILVV 266


>gi|237722098|ref|ZP_04552579.1| penicillin-binding protein [Bacteroides sp. 2_2_4]
 gi|229448967|gb|EEO54758.1| penicillin-binding protein [Bacteroides sp. 2_2_4]
          Length = 468

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVALSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|160884902|ref|ZP_02065905.1| hypothetical protein BACOVA_02892 [Bacteroides ovatus ATCC 8483]
 gi|156109937|gb|EDO11682.1| hypothetical protein BACOVA_02892 [Bacteroides ovatus ATCC 8483]
          Length = 468

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVALSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|329297511|ref|ZP_08254847.1| beta-lactam binding protein AmpH [Plautia stali symbiont]
          Length = 389

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 36/113 (31%)

Query: 1   MRQ---FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLD----------TNTGHVIAENYP 47
           M++   FL+ + +A+L        + +        ++D            TG  +     
Sbjct: 1   MKKRTPFLLALMVAVLPFTSTAQVLPDPLLASQ--IVDRYAEHIFYGSGATGMALVAIDG 58

Query: 48  DHP---------------------WNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +                          ASL+KLMT+ V+    +  +  L  P
Sbjct: 59  NQRVFASFGETRPGNNVRPQQDSLIRIASLSKLMTSEVMVKMAERGQIRLDDP 111


>gi|153000791|ref|YP_001366472.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS185]
 gi|151365409|gb|ABS08409.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella baltica OS185]
          Length = 502

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +D +   VI     +  + PAS  KL+TA    
Sbjct: 56 LAMDMSNNQVIFSQQAETLFIPASTQKLLTAVSAM 90


>gi|322378014|ref|ZP_08052501.1| penicillin-binding protein 1B [Streptococcus sp. M334]
 gi|321280996|gb|EFX58009.1| penicillin-binding protein 1B [Streptococcus sp. M334]
          Length = 824

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG V+        +        D   +PAS TK + AY +         A + +
Sbjct: 426 VLMDNKTGAVLGFVGGRNYQINQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSASILS 485

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +        ++   G     +       + +       +        K +++ M
Sbjct: 486 NYPTKFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 543

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 544 GYEIPEYGIESLPMGGGIEVTVAQH 568


>gi|289178275|gb|ADC85521.1| D-alanyl-meso-diaminopimelate endopeptidase [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 495

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
              ++  + G V+A++  D    PAS  K +T+    S L     + T   
Sbjct: 114 SAIIMQAD-GTVVADHAADVAREPASTMKTLTSLAAASVLDMGDTLPTQTF 163


>gi|241190540|ref|YP_002967934.1| D-alanyl-D-alanine carboxypeptidase [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240248932|gb|ACS45872.1| D-alanyl-D-alanine carboxypeptidase [Bifidobacterium animalis
           subsp. lactis Bl-04]
          Length = 490

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
              ++  + G V+A++  D    PAS  K +T+    S L     + T   
Sbjct: 109 SAIIMQAD-GTVVADHAADVAREPASTMKTLTSLAAASVLDMGDTLPTQTF 158


>gi|219682963|ref|YP_002469346.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bifidobacterium animalis subsp. lactis AD011]
 gi|219620613|gb|ACL28770.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bifidobacterium animalis subsp. lactis AD011]
          Length = 481

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
              ++  + G V+A++  D    PAS  K +T+    S L     + T   
Sbjct: 100 SAIIMQAD-GTVVADHAADVAREPASTMKTLTSLAAASVLDMGDTLPTQTF 149


>gi|183602054|ref|ZP_02963423.1| hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3
           (S13) domain [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|183218939|gb|EDT89581.1| hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3
           (S13) domain [Bifidobacterium animalis subsp. lactis
           HN019]
          Length = 436

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
              ++  + G V+A++  D    PAS  K +T+    S L     + T   
Sbjct: 55  SAIIMQAD-GTVVADHAADVAREPASTMKTLTSLAAASVLDMGDTLPTQTF 104


>gi|66817020|gb|AAY56814.1| penicillin-binding protein 1B [Streptococcus pneumoniae ATCC
           700669]
          Length = 754

 Score = 40.3 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 397 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 456

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 457 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 514

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 515 GYEIPEYGIESLPMGGGIEVTVAQH 539


>gi|332071171|gb|EGI81666.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA17545]
 gi|332071532|gb|EGI82025.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA17570]
          Length = 750

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 355 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 414

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 415 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 472

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 473 GYEIPEYGIESLPMGGGIEVTVAQH 497


>gi|280983557|gb|ACZ98826.1| extended-spectrum beta-lactamase GES-15 [Pseudomonas aeruginosa]
          Length = 287

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 58/219 (26%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +   F     MT+  A +  +  S N     +   +          M    + +G S + 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN------- 204
                  +        RD        +T                  +++   N       
Sbjct: 157 LDRKESEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|111657585|ref|ZP_01408322.1| hypothetical protein SpneT_02001220 [Streptococcus pneumoniae
           TIGR4]
          Length = 810

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 414 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 473

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 474 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 531

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 532 GYEIPEYGIESLPMGGGIEVTVAQH 556


>gi|66817026|gb|AAY56817.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 757

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 397 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 456

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 457 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 514

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 515 GYEIPEYGIESLPMGGGIEVTVAQH 539


>gi|260172738|ref|ZP_05759150.1| penicillin-binding protein, D-alanyl-D-alanine carboxypeptidase
          [Bacteroides sp. D2]
 gi|315921027|ref|ZP_07917267.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694902|gb|EFS31737.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 468

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVALSVCLLPLWGQQNFSRIDSLIKKMLPEASEIGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|255964399|gb|ACU44517.1| beta-lactamase CTX-M-15 [Escherichia coli]
          Length = 226

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +   S +K+M A  V    + +  +L   + I K+        +      TM+L 
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLA 123

Query: 106 NALKLLIVKSANDIAVAIAES 126
                 +  S N     +   
Sbjct: 124 ELSAAALQYSDNVAMNKLIAH 144


>gi|229076810|ref|ZP_04209720.1| Beta-lactamase [Bacillus cereus Rock4-18]
 gi|228706299|gb|EEL58562.1| Beta-lactamase [Bacillus cereus Rock4-18]
          Length = 323

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 57/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I+  + +  +  AS  K + A V+          L   I  +K         
Sbjct: 86  IDTGTNQTISYRH-NERFAFASTYKALAAGVLLQQNSID--TLNEVIKFTKEDLVDYSPV 142

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N             K  +K ++ + +         T 
Sbjct: 143 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFHKIGGPKGYEKALRQIGDRVTMSDRFETE 202

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L      +         +               A     
Sbjct: 203 LNEAIPGDIRDTSTAKAIATNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 262

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 263 WVVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 307


>gi|225859854|ref|YP_002741364.1| penicillin-binding protein 1B [Streptococcus pneumoniae 70585]
 gi|225719984|gb|ACO15838.1| penicillin-binding protein 1B [Streptococcus pneumoniae 70585]
          Length = 820

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|190364829|gb|ACE77058.1| extended-spectrum beta-lactamase PER-4 [Proteus vulgaris]
          Length = 308

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 62/229 (27%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 62  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 121

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 122 VPVQQLLQYSVSHTDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 178

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 179 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 238

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G  G+K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 239 KTGTSGIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 286


>gi|149006934|ref|ZP_01830615.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP18-BS74]
 gi|147761535|gb|EDK68500.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP18-BS74]
          Length = 820

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|328883307|emb|CCA56546.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces venezuelae ATCC
           10712]
          Length = 467

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
           + + + P L+      L   +++DT TG  +       P  PAS  K+
Sbjct: 90  LAAVLVPLLADPGLGPLRTASVVDTATGKQLYGEGAGTPMTPASTVKI 137


>gi|299145158|ref|ZP_07038226.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 3_1_23]
 gi|298515649|gb|EFI39530.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 3_1_23]
          Length = 468

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVALSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|237716931|ref|ZP_04547412.1| penicillin-binding protein [Bacteroides sp. D1]
 gi|262405700|ref|ZP_06082250.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 2_1_22]
 gi|294643383|ref|ZP_06721202.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides ovatus SD CC 2a]
 gi|294810634|ref|ZP_06769284.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides xylanisolvens SD CC 1b]
 gi|229442914|gb|EEO48705.1| penicillin-binding protein [Bacteroides sp. D1]
 gi|262356575|gb|EEZ05665.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 2_1_22]
 gi|292641261|gb|EFF59460.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides ovatus SD CC 2a]
 gi|294442176|gb|EFG10993.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides xylanisolvens SD CC 1b]
          Length = 468

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVALSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|148992058|ref|ZP_01821832.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP9-BS68]
 gi|168489159|ref|ZP_02713358.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP195]
 gi|147929107|gb|EDK80118.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP9-BS68]
 gi|183572208|gb|EDT92736.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP195]
          Length = 820

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|134097005|ref|YP_001102666.1| hypothetical protein SACE_0392 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006249|ref|ZP_06564222.1| hypothetical protein SeryN2_17163 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133909628|emb|CAL99740.1| hypothetical protein SACE_0392 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 1264

 Score = 40.3 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 3/61 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMT---AYVVFSFL 69
           +S                 T++D  TG  + +  P     PAS  KL+T   A +     
Sbjct: 873 VSAALAGPLANPALGTFGGTVIDAQTGAPVWQQSPGQALTPASTGKLLTMSAALLALDHQ 932

Query: 70  K 70
           +
Sbjct: 933 Q 933


>gi|332198706|gb|EGJ12788.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA47368]
          Length = 751

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 355 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 414

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 415 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 472

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 473 GYEIPEYGIESLPMGGGIEVTVAQH 497


>gi|255535069|ref|YP_003095440.1| Beta-lactamase [Flavobacteriaceae bacterium 3519-10]
 gi|255341265|gb|ACU07378.1| Beta-lactamase [Flavobacteriaceae bacterium 3519-10]
          Length = 295

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 23/90 (25%), Gaps = 9/90 (10%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETN-------KLPYYTLL-DTNTGHVIAENYPDHPWN 52
          M++  +        N      + +                + D      I     +    
Sbjct: 3  MKKITLFFLFISALNFSQNSVLKKQIQQIIKDKNATVAVSVHDFENNKTIH-INGNKKLP 61

Query: 53 PASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            S+ K   A  V + + E K  L   I I
Sbjct: 62 MLSVFKFHIALAVLNEVDEGKLSLDQNIFI 91


>gi|196228854|ref|ZP_03127720.1| beta-lactamase [Chthoniobacter flavus Ellin428]
 gi|196227135|gb|EDY21639.1| beta-lactamase [Chthoniobacter flavus Ellin428]
          Length = 275

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 8/83 (9%), Positives = 22/83 (26%), Gaps = 1/83 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + D  T      +  D  ++ AS  K+     +F  +   +  L   + +          
Sbjct: 26  VFDYETDRT-FSHEGDRWFHAASTMKVAVLLALFHAVDTGRVRLEDRLHVRNRFRSIVDR 84

Query: 93  NSTFKKGSTMTLDNALKLLIVKS 115
           +    +          + +    
Sbjct: 85  SIFRVQRDRDADSAVHRRVGRSM 107


>gi|90419093|ref|ZP_01227004.1| putative beta-lactamase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337173|gb|EAS50878.1| putative beta-lactamase [Aurantimonas manganoxydans SI85-9A1]
          Length = 299

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 71/258 (27%), Gaps = 17/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLL-------DTNTGHVI--------AENY 46
           R+ ++  A+ M++        AE         +       D   G  I          + 
Sbjct: 10  RRSVLSAAVVMVALCAGPAVRAEDATARLADTVQGLEERLDARIGIFIRDSGSDWQWGHR 69

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            D  +  AS  K +    V    ++    L  P+ I           +  ++GSTMT+  
Sbjct: 70  EDERFLMASTFKSVLCGAVLEQAEQGALALDEPVKIRAEDILSYAPVTETRQGSTMTIGE 129

Query: 107 ALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                   S N  A  + +     +    F++ + +    L  +                
Sbjct: 130 LCLATADMSDNTAANLLLDRLGGPQAVTAFLRGIGDAVTRLDRTEPDLNIFAPGDPRDTT 189

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +           +  D  +     Q++     G        A          K+G     
Sbjct: 190 SPKAMATSWETMLVGDGLRPASRQQLREWMRHGGVTGKLIRASTPKDWEVVDKSGGGQTH 249

Query: 225 GFNIVASAIQGDQSLIAV 242
             N+VA      ++ I V
Sbjct: 250 TRNLVAMLTPPGRAPIFV 267


>gi|66817022|gb|AAY56815.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 751

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 394 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 453

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 454 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 511

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 512 GYEIPEYGIESLPMGGGIEVTVAQH 536


>gi|270289830|ref|ZP_06196056.1| beta-lactamase class A [Pediococcus acidilactici 7_4]
 gi|270281367|gb|EFA27199.1| beta-lactamase class A [Pediococcus acidilactici 7_4]
          Length = 400

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 8/220 (3%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDN 106
           D P   AS  KL      +  +K+ +  L+   T++  +  +          G+ +++ +
Sbjct: 176 DQPQRAASDIKLFVMIAAYQQVKDGELSLSDDYTLTDSDKVDGTGKLREMADGTKISIKD 235

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
            +  ++  S N  A  +   L         +  M  T   L                 +Y
Sbjct: 236 LIGYMMEDSDNTAANIMIRKLGGMAAVNHQIDKMGATDTKLERMLMDTDALE--DGKDNY 293

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T+A+D+     +I         Y +     +K                    KTG     
Sbjct: 294 TSAKDLGTALKKIYNHQMVSRKYDEEMLTILKQNGNHTKLPHDLPTEATVYNKTGEFDDY 353

Query: 225 GFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSASLLSMG 263
           G    A+     + + + V++       R++   ++ S G
Sbjct: 354 GVENDAAIFGNQKGAFVIVVM--SQDGQRDEQINAMNSFG 391


>gi|126457951|ref|YP_001075336.1| class A beta-lactamase [Burkholderia pseudomallei 1106a]
 gi|167849310|ref|ZP_02474818.1| class A beta-lactamase [Burkholderia pseudomallei B7210]
 gi|237510236|ref|ZP_04522951.1| beta-lactamase [Burkholderia pseudomallei MSHR346]
 gi|242313306|ref|ZP_04812323.1| class A beta-lactamase [Burkholderia pseudomallei 1106b]
 gi|126231719|gb|ABN95132.1| class A beta-lactamase [Burkholderia pseudomallei 1106a]
 gi|235002441|gb|EEP51865.1| beta-lactamase [Burkholderia pseudomallei MSHR346]
 gi|242136545|gb|EES22948.1| class A beta-lactamase [Burkholderia pseudomallei 1106b]
          Length = 314

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|13649898|gb|AAK37506.1|AF326770_1 beta-lactamase precursor [Burkholderia pseudomallei]
          Length = 295

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|220925314|ref|YP_002500616.1| penicillin-binding protein transpeptidase [Methylobacterium
           nodulans ORS 2060]
 gi|219949921|gb|ACL60313.1| penicillin-binding protein transpeptidase [Methylobacterium
           nodulans ORS 2060]
          Length = 595

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 34/135 (25%), Gaps = 25/135 (18%)

Query: 26  NKLPYYTLLDTNTGHVIA--------------ENYPDH-------PWNPASLTKLMTAYV 64
            K     +LD NTG VIA                 PD         +   S  K MT  +
Sbjct: 252 AKAAAAMILDVNTGEVIALASLPDFDPNEPADALNPDRINRMNVGVYEMGSTFKAMTLAM 311

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                K            ++    +       +   T  +    ++    S    A    
Sbjct: 312 ALESGKFTVNSTFD----TRGGVLHWGRQKIHEYHGTNRVITLPEVFTHSSNIGSAKMAL 367

Query: 125 ESLCKTEKKFVQHMN 139
                  K F++ M 
Sbjct: 368 GVGVPGHKAFLRKMG 382


>gi|108759041|ref|YP_629330.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Myxococcus xanthus DK 1622]
 gi|108462921|gb|ABF88106.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Myxococcus xanthus DK 1622]
          Length = 748

 Score = 40.3 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 11 AMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          A+ S +   L  A         L+   + G V+  +  D   NPAS  KL+T+    
Sbjct: 39 ALKSALLQVLQRAPLKASRMGVLMQSLDDGAVVFSHNADELLNPASNVKLVTSAAAL 95


>gi|332198912|gb|EGJ12993.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA47901]
          Length = 751

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 355 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 414

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 415 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 472

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 473 GYEIPEYGIESLPMGGGIEVTVAQH 497


>gi|303256062|ref|ZP_07342084.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS455]
 gi|302596978|gb|EFL64102.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS455]
          Length = 752

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 356 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 415

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 416 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 473

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 474 GYEIPEYGIESLPMGGGIEVTVAQH 498


>gi|168484389|ref|ZP_02709341.1| penicillin-binding protein 1B [Streptococcus pneumoniae CDC1873-00]
 gi|172042363|gb|EDT50409.1| penicillin-binding protein 1B [Streptococcus pneumoniae CDC1873-00]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|149002928|ref|ZP_01827839.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP14-BS69]
 gi|237821718|ref|ZP_04597563.1| penicillin-binding protein 1B [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147758931|gb|EDK65926.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP14-BS69]
          Length = 752

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 356 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 415

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 416 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 473

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 474 GYEIPEYGIESLPMGGGIEVTVAQH 498


>gi|38141991|dbj|BAD00798.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141995|dbj|BAD00800.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141999|dbj|BAD00802.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 820

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|304385926|ref|ZP_07368268.1| beta-lactamase class A [Pediococcus acidilactici DSM 20284]
 gi|304327986|gb|EFL95210.1| beta-lactamase class A [Pediococcus acidilactici DSM 20284]
          Length = 400

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 8/220 (3%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDN 106
           D P   AS  KL      +  +K+ +  L+   T++  +  +          G+ +++ +
Sbjct: 176 DQPQRAASDIKLFVMIAAYQQVKDGELSLSDDYTLTDSDKVDGTGKLREMADGTKISIKD 235

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
            +  ++  S N  A  +   L         +  M  T   L                 +Y
Sbjct: 236 LIGYMMEDSDNTAANIMIRKLGGMAAVNHQIDKMGATDTKLERMLMDTDALE--DGKDNY 293

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           T+A+D+     +I         Y +     +K                    KTG     
Sbjct: 294 TSAKDLGTALKKIYNHQMVSRKYDEEMLTILKQNGNHTKLPHDLPTEATVYNKTGEFDDY 353

Query: 225 GFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSASLLSMG 263
           G    A+     + + + V++       R++   ++ S G
Sbjct: 354 GVENDAAIFGNQKGAFVIVVM--SQDGQRDEQINAMNSFG 391


>gi|295085875|emb|CBK67398.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
          [Bacteroides xylanisolvens XB1A]
          Length = 468

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++A+++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVALSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|284034337|ref|YP_003384268.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Kribbella flavida DSM 17836]
 gi|283813630|gb|ADB35469.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Kribbella flavida DSM 17836]
          Length = 456

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 19/54 (35%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +   L+     +    ++ D + G  +       P+ PAS  KL+T       
Sbjct: 66  ALSAALADPSLGRHFGASVYDASRGKQVYSVGAAKPFVPASTLKLLTTVAALEA 119


>gi|227538333|ref|ZP_03968382.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241848|gb|EEI91863.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 416

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 10/123 (8%)

Query: 46  YPDHPWNPASLTKLMTAYVVFS---FLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGST 101
            P   + PAS  KL TA +       L  K     TP+ I S    +    + +  +   
Sbjct: 74  NPHWYFYPASTVKLPTAILALEKINELNIKGLTKDTPLRIDSAFEKQTRVDHDSSSETGL 133

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            ++   ++ +++ S ND    + E +        + +N   K  G   +  +N   +   
Sbjct: 134 PSVGQYVRKILLTSDNDAQNRLFEFI------GREELNKKLKKYGTQNSRIVNRLAIGDK 187

Query: 162 GHY 164
           G +
Sbjct: 188 GIW 190


>gi|332071367|gb|EGI81861.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA41301]
          Length = 751

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 355 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 414

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 415 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 472

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 473 GYEIPEYGIESLPMGGGIEVTVAQH 497


>gi|261880089|ref|ZP_06006516.1| D-alanyl-D-alanine carboxypeptidase [Prevotella bergensis DSM
           17361]
 gi|270333244|gb|EFA44030.1| D-alanyl-D-alanine carboxypeptidase [Prevotella bergensis DSM
           17361]
          Length = 425

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/256 (10%), Positives = 58/256 (22%), Gaps = 28/256 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPS 92
           LD ++   +          PAS  K +TA      L       T      + ++      
Sbjct: 87  LDADS--ALYRFNERQLMRPASTMKAITAITALDRLGGSYQFKTELCYTGQVDSCVLQGD 144

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                        + ++  +          I  +L     K ++  +   +       + 
Sbjct: 145 VYCVGGFDPRFNTDDMRAFVEGLHKMGIDTIRGNLYA--DKSMKDADLLGEGWCWDDDNP 202

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKT--------DFPQYMHYFQIKGLEIKGKKYPNTN 204
           + +  ++        R    L                P        +   I         
Sbjct: 203 VLSPLLISRKDQFMDRFYTELRKGGIYLAGAIGNKRKPHEASCIVRRFHTIDQILMRMMK 262

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA------- 257
            +   +  A   +   +  +      SA    + L+   LG      R    +       
Sbjct: 263 ESDNLYAEAMFYQLAASTGNHPASAKSAKAVIRQLVN-KLGLDGSRYRFADGSGLSLYNY 321

Query: 258 -------SLLSMGFYN 266
                   LL   + N
Sbjct: 322 VSVELEVRLLRYAYEN 337


>gi|149023796|ref|ZP_01836257.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP23-BS72]
 gi|147929592|gb|EDK80585.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP23-BS72]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|62738935|pdb|2BG1|A Chain A, Active Site Restructuring Regulates Ligand Recognition In
           Classa Penicillin-Binding Proteins (Pbps)
 gi|296863374|pdb|2XD5|A Chain A, Structural Insights Into The Catalytic Mechanism And The
           Role Of Streptococcus Pneumoniae Pbp1b
 gi|296863375|pdb|2XD5|B Chain B, Structural Insights Into The Catalytic Mechanism And The
           Role Of Streptococcus Pneumoniae Pbp1b
          Length = 494

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 128 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 187

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 188 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 245

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 246 GYEIPEYGIESLPMGGGIEVTVAQH 270


>gi|38142019|dbj|BAD00812.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 820

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|225861915|ref|YP_002743424.1| penicillin-binding protein 1B [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229998|ref|ZP_06963679.1| penicillin-binding protein 1B [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254072|ref|ZP_06977658.1| penicillin-binding protein 1B [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501597|ref|YP_003723537.1| penicillin-binding protein 1b [Streptococcus pneumoniae
           TCH8431/19A]
 gi|38141983|dbj|BAD00794.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142007|dbj|BAD00806.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142011|dbj|BAD00808.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142015|dbj|BAD00810.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142017|dbj|BAD00811.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142021|dbj|BAD00813.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142033|dbj|BAD00819.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|225727961|gb|ACO23812.1| penicillin-binding protein 1B [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237192|gb|ADI68323.1| penicillin-binding protein 1b [Streptococcus pneumoniae
           TCH8431/19A]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|291514759|emb|CBK63969.1| Cell division protein FtsI/penicillin-binding protein 2 [Alistipes
           shahii WAL 8301]
          Length = 753

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 19/66 (28%), Gaps = 16/66 (24%)

Query: 32  TLLDTNTGHVIA----ENYPD------------HPWNPASLTKLMTAYVVFSFLKEKKAM 75
            +++ +TG ++A        D                P S  KL T   +    +   + 
Sbjct: 312 IVMEVHTGEILAMVNLGRNADGSFAERENYALGRSMEPGSTFKLATMLTLLDDARMPVST 371

Query: 76  LTTPIT 81
           +     
Sbjct: 372 VYDTHN 377


>gi|237650578|ref|ZP_04524830.1| penicillin-binding protein 1B [Streptococcus pneumoniae CCRI 1974]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|38141969|dbj|BAD00787.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142025|dbj|BAD00815.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142029|dbj|BAD00817.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|332198520|gb|EGJ12603.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA41317]
          Length = 751

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 355 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 414

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 415 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 472

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 473 GYEIPEYGIESLPMGGGIEVTVAQH 497


>gi|325971408|ref|YP_004247599.1| beta-lactamase [Spirochaeta sp. Buddy]
 gi|324026646|gb|ADY13405.1| beta-lactamase [Spirochaeta sp. Buddy]
          Length = 420

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 36/102 (35%), Gaps = 20/102 (19%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP------YYTLLDTNTGHVIAEN--------- 45
           M+  L+I+ +++ +    +    E  +           ++  + G V+ +          
Sbjct: 1   MKVLLLIL-VSLAAGSGAWAQEYEVLEQIDRLVNLSGIVMVADRGEVVYQQSFGFADHQS 59

Query: 46  ----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                    +  ASLTK  TA  +    ++ +  +  P+ + 
Sbjct: 60  KQVIDEHTLFPLASLTKPFTAMAIGLLQEQGRLDIDDPVAMY 101


>gi|170737715|ref|YP_001778975.1| Beta-lactamase [Burkholderia cenocepacia MC0-3]
 gi|169819903|gb|ACA94485.1| Beta-lactamase [Burkholderia cenocepacia MC0-3]
          Length = 312

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 67/226 (29%), Gaps = 5/226 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G VI E+     +   S  K M +  V +   E+  +L   +T +K         
Sbjct: 73  IDTASGRVI-EHRAGERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVTYTKADLVNYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    GS MT+    +  I  S N  A  + +          + + + + +  L    T 
Sbjct: 132 SEKHVGSGMTVAALCEAAIQYSDNSAANLLMKLIGGPSAVTAYARSIGDDAFRLDRWETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L      D        Q+       K       A     
Sbjct: 192 LNTALPGDPRDTTTPAAMAASLRVLTLGDALPAAQRAQLVAWLRGNKVGDKRMRAGVPAG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR-NTRNKV 255
              G KTG       N         +  ++  +     R + R K 
Sbjct: 252 WVVGDKTGTGDYGTTNDAGVIWPTSRAPIVLAVYYTQTRADARAKD 297


>gi|149011955|ref|ZP_01833103.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP19-BS75]
 gi|221232807|ref|YP_002511961.1| penicillin-binding protein 1B [Streptococcus pneumoniae ATCC
           700669]
 gi|225855586|ref|YP_002737098.1| penicillin-binding protein 1B [Streptococcus pneumoniae JJA]
 gi|38141961|dbj|BAD00783.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141963|dbj|BAD00784.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141973|dbj|BAD00789.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141975|dbj|BAD00790.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141979|dbj|BAD00792.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38141989|dbj|BAD00797.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142001|dbj|BAD00803.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142003|dbj|BAD00804.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142023|dbj|BAD00814.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142027|dbj|BAD00816.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142031|dbj|BAD00818.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|38142035|dbj|BAD00820.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|147763910|gb|EDK70843.1| NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Streptococcus
           pneumoniae SP19-BS75]
 gi|220675269|emb|CAR69862.1| penicillin-binding protein 1B [Streptococcus pneumoniae ATCC
           700669]
 gi|225723160|gb|ACO19013.1| penicillin-binding protein 1B [Streptococcus pneumoniae JJA]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|88192667|pdb|2CC1|A Chain A, Crystal Structure Of The Class A Beta-Lactamase From
           Mycobacterium Fortuitum
          Length = 262

 Score = 40.3 bits (92), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 6/213 (2%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           +  +G  I    PD  +   S  K   A  V    +  +  L   + +  +A       +
Sbjct: 24  NLQSGRRITHR-PDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVFVDADALVPNSPVT 82

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHF 152
             + G+ MTL    +  + +S N  A  + +++        F + + +    L       
Sbjct: 83  EARAGAEMTLAELCQAALQRSDNTAANLLLKTIGGPAAVTAFARSVGDERTRLDRWEVEL 142

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            +   +      T+      + +R            +    +       ++  A      
Sbjct: 143 NS--AIPGDPRDTSTPAALAVGYRAILAGDALSPPQRGLLEDWMRANQTSSMRAGLPEGW 200

Query: 213 ADGMKTGFTCASGFNIVASAI-QGDQSLIAVIL 244
               KTG       N    A     Q L+ V++
Sbjct: 201 TTADKTGSGDYGSTNDAGIAFGPDGQRLLLVMM 233


>gi|83859454|ref|ZP_00952975.1| similar to penicillin-binding protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852901|gb|EAP90754.1| similar to penicillin-binding protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 370

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +  ASLTK MTA +V S  +E    L  P
Sbjct: 74  ADSVFELASLTKHMTALMVLSLAEEGHLSLDDP 106


>gi|301795026|emb|CBW37491.1| penicillin-binding protein 1B [Streptococcus pneumoniae INV104]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|209694179|ref|YP_002262107.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Aliivibrio
          salmonicida LFI1238]
 gi|208008130|emb|CAQ78272.1| penicillin-binding protein 4 precursor [Aliivibrio salmonicida
          LFI1238]
          Length = 469

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKL--PYYTLLD-TNTGHVIAENYPDHPWNPASLTK 58
          R F++ +++   S      S  +          +++  +   +  +   +    PAS  K
Sbjct: 5  RLFILSLSLYSFSTFASIPSSIQLLPSGSRAAIVVESLHDQSIEFQQKENELLPPASTLK 64

Query: 59 LMTAY 63
          + TA 
Sbjct: 65 VATAL 69


>gi|3644036|gb|AAC43036.1| beta-lactamase [Xanthomonas campestris pv. campestris]
          Length = 295

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 6/208 (2%)

Query: 33  LLDTNTG-HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           LLD+ +G  +      +  +   S  K + A  V   + + +  LT  I I  +      
Sbjct: 55  LLDSGSGWRI--GQRENERFPMCSTFKFVLAAAVLQRVDKGELRLTQQIKIRASDMLEHA 112

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSA 149
             +    G ++++    +  ++ S N  A  +           +F++ + +T        
Sbjct: 113 PVTERHVGGSLSVAELCQATMIHSDNPAANLLFPLIGDPPGLTRFLRGIGDTKTRSDRLE 172

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A G       T A   A L   +  D  Q     Q+    I  +   +   A   
Sbjct: 173 AMNGFAPGEP-RDTTTPAAMAATLRTLLLGDALQPASRKQLTAWMIDNRTGDDCLRAGLP 231

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G KTG       N +A      +
Sbjct: 232 RDWKIGDKTGSNGTDTRNDIAIIWPPGR 259


>gi|323710380|gb|ADY02591.1| extended spectrum beta-lactamase CTX-M3 [Shigella sonnei]
 gi|323710382|gb|ADY02592.1| extended spectrum beta-lactamase CTX-M3 [Shigella dysenteriae 3]
 gi|323710384|gb|ADY02593.1| extended spectrum beta-lactamase CTX-M3 [Shigella flexneri 2a]
 gi|323710386|gb|ADY02594.1| extended spectrum beta-lactamase CTX-M3 [Shigella dysenteriae 2a]
          Length = 212

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 42  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 99

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                TM+L       +  S N     +   
Sbjct: 100 KHVNGTMSLAELSAAALQYSDNVAMNKLIAH 130


>gi|219920915|emb|CAQ76635.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    +L   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTXKVMAAAAVLKQSESHPDVLNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|157956212|gb|ABW06475.1| extended-spectrum beta-lactamase CTX-M-15 [Klebsiella pneumoniae]
          Length = 236

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 27  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 84

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                TM+L       +  S N     +   
Sbjct: 85  KHVNGTMSLAELSAAALQYSDNVAMNKLIAH 115


>gi|118132717|gb|ABK60211.1| extended-spectrum beta-lactamase CTX-M-3 [Shigella boydii]
          Length = 208

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 33  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 90

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                TM+L       +  S N     +   
Sbjct: 91  KHVNGTMSLAELSAAALQYSDNVAMNKLIAH 121


>gi|68271949|gb|AAY89241.1| putative beta-lactamase [uncultured bacterium BAC-L1N9]
          Length = 523

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 27/103 (26%)

Query: 4   FLVIIAMAMLSNI---FPFLSIAETNKL-----------PYYTLLDTNTGHVIAEN---- 45
            L +IA+A+ +         +  +               P   +     G V+ +     
Sbjct: 9   ILTLIAVALSTFPTLPLLAQAAPKELDATIAGILKQFNQPGAAVAVIRNGKVVFQQGWGV 68

Query: 46  ---------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                         +  AS TK MTA  +   ++E K      
Sbjct: 69  QNVVTGTRVNEHTRFQVASNTKAMTAAALAILVEEGKLSWDDR 111


>gi|68165963|gb|AAY87935.1| CTX-M-3 beta-lactamase [Klebsiella pneumoniae]
          Length = 214

 Score = 40.3 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 2/91 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    + +  +L   + I K+        + 
Sbjct: 40  ADNSQILY--RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAE 97

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                TM+L       +  S N     +   
Sbjct: 98  KHVNGTMSLAELSAAALQYSDNVAMNKLIAH 128


>gi|328675763|gb|AEB28438.1| D-alanyl-D-alanine carboxypeptidase [Francisella cf. novicida
          3523]
          Length = 464

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 15/74 (20%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNK--------------LPYYT-LLDTNTGHVIAENYPDH 49
          L++  + +    +P    +                        ++D+    VI     D 
Sbjct: 9  LLLFFILVPFIAYPLAVNSIELNQVLDNSIKQNNLQSAQIAVKIIDSQKNTVILSRNADK 68

Query: 50 PWNPASLTKLMTAY 63
           + PAS TKL+T  
Sbjct: 69 NFVPASNTKLLTGI 82


>gi|295690758|ref|YP_003594451.1| beta-lactamase [Caulobacter segnis ATCC 21756]
 gi|295432661|gb|ADG11833.1| Beta-lactamase [Caulobacter segnis ATCC 21756]
          Length = 300

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 55/217 (25%), Gaps = 9/217 (4%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LDT+ G        D  +   S  K   +  +   + + +  L   +T           
Sbjct: 55  VLDTHDGRR-FAWRGDQRFRMCSTIKAPLSAAILRRVDQGRERLDRRVTFGPEVLMDNSP 113

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG-----L 147
                    MT+    +  I  S N  A  + E+L          +    + +G      
Sbjct: 114 IVEKHVQDGMTIGQLCEATITLSDNAAANLLFEALGGA-SGGPAALTRFLRAIGDQTTRS 172

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                    G       TT     + +W+            + +  +             
Sbjct: 173 DRLEPELNRGPPDDPRDTTTPAAMLATWKTLLLDDALSPASRQQFRDWLIANKTGDRRLR 232

Query: 208 GTFL--GADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                    G KTG       N VA A    +  I +
Sbjct: 233 AGLPPGWRVGDKTGNNGRDITNDVAIAWPPGRGPILI 269


>gi|168577130|ref|ZP_02722950.1| penicillin-binding protein 1B [Streptococcus pneumoniae MLV-016]
 gi|183577248|gb|EDT97776.1| penicillin-binding protein 1B [Streptococcus pneumoniae MLV-016]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|148998106|ref|ZP_01825619.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP11-BS70]
 gi|307068711|ref|YP_003877677.1| membrane carboxypeptidase [Streptococcus pneumoniae AP200]
 gi|147756116|gb|EDK63159.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP11-BS70]
 gi|306410248|gb|ADM85675.1| Membrane carboxypeptidase (penicillin-binding protein)
           [Streptococcus pneumoniae AP200]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|15901914|ref|NP_346518.1| penicillin-binding protein 1B [Streptococcus pneumoniae TIGR4]
 gi|14973609|gb|AAK76158.1| penicillin-binding protein 1B [Streptococcus pneumoniae TIGR4]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|38141981|dbj|BAD00793.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|38141985|dbj|BAD00795.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|301802769|emb|CBW35543.1| penicillin-binding protein 1B [Streptococcus pneumoniae INV200]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|38142013|dbj|BAD00809.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|319957738|ref|YP_004169001.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Nitratifractor
          salsuginis DSM 16511]
 gi|319420142|gb|ADV47252.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Nitratifractor
          salsuginis DSM 16511]
          Length = 466

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 10/87 (11%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAE-------TNKLPYYTLL---DTNTGHVIAENYPDHP 50
          M + L ++ + + +         E        +  P    +       G  +A++  D  
Sbjct: 1  MMRILGLLWLLISALPLAAYLPPEIHTLLDKDHIAPSQVSIYITPVKKGAALAKHNVDTR 60

Query: 51 WNPASLTKLMTAYVVFSFLKEKKAMLT 77
            PAS+ KL T Y        +    T
Sbjct: 61 RKPASVIKLTTTYSALREFGPRWRWPT 87


>gi|238060056|ref|ZP_04604765.1| beta-lactamase [Micromonospora sp. ATCC 39149]
 gi|237881867|gb|EEP70695.1| beta-lactamase [Micromonospora sp. ATCC 39149]
          Length = 442

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK MTA +V          L  P
Sbjct: 54 DADRQYRLGSITKTMTAVLVMQQRDAGALALDDP 87


>gi|114778162|ref|ZP_01453049.1| hypothetical protein SPV1_00852 [Mariprofundus ferrooxydans PV-1]
 gi|114551580|gb|EAU54134.1| hypothetical protein SPV1_00852 [Mariprofundus ferrooxydans PV-1]
          Length = 319

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 49/207 (23%), Gaps = 20/207 (9%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
           A+   D     ASL K+      F  +K+ K  L      +        SN        M
Sbjct: 80  AQVNGDQMMYAASLPKIAVLLTAFELIKQGKLPLNRETRDTMTRMIRYSSNKDATAMIDM 139

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG--VVQ 160
              +                I   +   + +     +N    +G         H   +  
Sbjct: 140 VGKDY---------------INTVMESPKYRLYDPKHNGGLWVGKEYAGTAPFHRDPLHN 184

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN---WAVGTFLGADGMK 217
             H  +A  +A   + ++T       Y       +      +                 +
Sbjct: 185 LSHGASAMQVARFYYMMQTGQLVSPRYSAEMKGIMADSGINHKFVKGLDAMHNPDIRMYR 244

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVIL 244
              T        A    G    IAV L
Sbjct: 245 KSGTWRDWHADSALIEHGGHRYIAVAL 271


>gi|313765284|gb|EFS36648.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL013PA1]
 gi|313815347|gb|EFS53061.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL059PA1]
 gi|313828786|gb|EFS66500.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL063PA2]
 gi|314916063|gb|EFS79894.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL005PA4]
 gi|314917214|gb|EFS81045.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL050PA1]
 gi|314921714|gb|EFS85545.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL050PA3]
 gi|314931079|gb|EFS94910.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL067PA1]
 gi|314955052|gb|EFS99458.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL027PA1]
 gi|314959091|gb|EFT03193.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL002PA1]
 gi|314969689|gb|EFT13787.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL037PA1]
 gi|315099489|gb|EFT71465.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL059PA2]
 gi|315102005|gb|EFT73981.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL046PA1]
 gi|315110073|gb|EFT82049.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL030PA2]
 gi|327454529|gb|EGF01184.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL087PA3]
 gi|327456599|gb|EGF03254.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL083PA2]
 gi|328755583|gb|EGF69199.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL087PA1]
 gi|328756909|gb|EGF70525.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Propionibacterium acnes HL025PA2]
          Length = 457

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +A  + + +    +           ++D   G  + ++  +    PAS  K++TA  +  
Sbjct: 71  VAATIANRVKSAGAAPGVLGAD---IMDAAIGETLYQSGQNSLLTPASNLKVLTAIALLD 127

Query: 68  FLKEKK 73
                 
Sbjct: 128 CTDAGH 133


>gi|306834901|ref|ZP_07467958.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
 gi|304569200|gb|EFM44708.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
          Length = 292

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 63/240 (26%), Gaps = 47/240 (19%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY-----TLLDTNTGHVIAENYPDHPWNPAS 55
           M++  +   +  LS +    + A +             +  ++G  ++           S
Sbjct: 11  MKKLAISSLVTALSFVTIPAAQAVSLDSQSVPARTQITVRHDSGATVSTANSHESRPALS 70

Query: 56  LTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           L+K+   Y+ +  LK                                       ++    
Sbjct: 71  LSKI---YLGYWVLKYGSVS---------------------------DKAQVEHMIRYSG 100

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
               +          ++++ Q + +  +  GLS TH+    G  Q      AR  A +  
Sbjct: 101 DAVAS--------DLDRRYPQAIPSIIQEFGLSETHYTGYWGTTQTSTEDIARFTAEIQH 152

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                                 ++    ++      G  G K G++     +   S   G
Sbjct: 153 DPIAAPIFAGMATAAPVAADGYRQ----DFGTDHIPGVWGTKFGWSDDRTIHASVSTGHG 208


>gi|303259600|ref|ZP_07345576.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP-BS293]
 gi|303262045|ref|ZP_07347990.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP14-BS292]
 gi|303264501|ref|ZP_07350420.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS397]
 gi|303266778|ref|ZP_07352659.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS457]
 gi|303269002|ref|ZP_07354785.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS458]
 gi|302636685|gb|EFL67175.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP14-BS292]
 gi|302639152|gb|EFL69611.1| penicillin-binding protein 1B [Streptococcus pneumoniae SP-BS293]
 gi|302641469|gb|EFL71833.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS458]
 gi|302643686|gb|EFL73952.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS457]
 gi|302645871|gb|EFL76099.1| penicillin-binding protein 1B [Streptococcus pneumoniae BS397]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|283455475|ref|YP_003360039.1| hypothetical protein BDP_0546 [Bifidobacterium dentium Bd1]
 gi|283102109|gb|ADB09215.1| Conserved hypothetical secreted protein with D-Ala-D-Ala
           carboxypeptidase 3 (S13) domain [Bifidobacterium dentium
           Bd1]
          Length = 481

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 21  SIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +  E     Y   + D   G V+AE+  D    PAS  K +TAY V + L   
Sbjct: 91  AATEGIGGDYSIAIADAK-GEVVAESGIDETRVPASTMKTLTAYAVATTLDMG 142


>gi|260431443|ref|ZP_05785414.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415271|gb|EEX08530.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Silicibacter lacuscaerulensis ITI-1157]
          Length = 492

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 14 SNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +    +  A   K      + D  TG  +     +    PAS+ K +TA     
Sbjct: 41 LSAPERIVAAAGLKGEVAFAVADVKTGAELEAYEGERGLPPASVAKALTALYALD 95


>gi|171741156|ref|ZP_02916963.1| hypothetical protein BIFDEN_00223 [Bifidobacterium dentium ATCC
           27678]
 gi|171276770|gb|EDT44431.1| hypothetical protein BIFDEN_00223 [Bifidobacterium dentium ATCC
           27678]
          Length = 459

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 21  SIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
           +  E     Y   + D   G V+AE+  D    PAS  K +TAY V + L   
Sbjct: 69  AATEGIGGDYSIAIADAK-GEVVAESGIDETRVPASTMKTLTAYAVATTLDMG 120


>gi|83774923|dbj|BAE65046.1| unnamed protein product [Aspergillus oryzae]
          Length = 411

 Score = 40.3 bits (92), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 19/147 (12%)

Query: 32  TLLDTNTGHVIAEN----------YP-----DHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             +D ++G +I                    D  +  AS+TKL+TA  V   ++     L
Sbjct: 25  IAID-SSGKIIYHRAAGKASLDDENAPALQTDSLYWIASMTKLVTAIAVMQLVERGIVSL 83

Query: 77  TT--PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                  + +        +   +           K+ +       A  + +S     +K+
Sbjct: 84  DEDVRTIVPELRDIQILEDIRNESNQLHLKPVQGKITLRNLMCHTAGFVYDSSSPLLQKW 143

Query: 135 VQHMNNTSKNL-GLSATHFMNAHGVVQ 160
            +    T+    G  A +         
Sbjct: 144 SKSHGRTAYTFCGSMAGYHHPLLFEPD 170


>gi|94502823|gb|ABF29640.1| beta-lactamase [Escherichia coli]
          Length = 189

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 47/186 (25%), Gaps = 4/186 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   V+     D  +   S +K+M A  V    + +K +L  P+ I           + 
Sbjct: 4   ADNTQVLY--RGDERFPMCSTSKVMAAAAVLKQSETQKQLLNQPVEIKPADLVNYNPIAE 61

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                TMTL       +  S N     +            F + + + +  L  +     
Sbjct: 62  KHVNGTMTLAELSAAALQYSDNTAMNKLIAQLGGPGGVTAFARAIGDETFRLDRTEPTLN 121

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
            A         T       L               Q+            +  A       
Sbjct: 122 TAIPGDPRDTTTPRAMAQTLRQLTLGHALGETQRAQLVTWLKGNTTGAASIRAGLPTSWT 181

Query: 214 DGMKTG 219
            G KTG
Sbjct: 182 VGDKTG 187


>gi|89899009|ref|YP_521480.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodoferax ferrireducens T118]
 gi|89343746|gb|ABD67949.1| D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS
          family S13 [Rhodoferax ferrireducens T118]
          Length = 499

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 14/78 (17%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHV--IAENYPDH 49
          + L I+  A+        ++                     ++D   G +     +    
Sbjct: 16 RLLAILIGALTLWPALAQNLPPEVDAALARARVPRDAVSLLVMDAE-GKLPPRLSHRATV 74

Query: 50 PWNPASLTKLMTAYVVFS 67
          P +PAS+ KL+T Y    
Sbjct: 75 PMSPASVMKLVTTYAALD 92


>gi|320095486|ref|ZP_08027157.1| hypothetical protein HMPREF9005_1769 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319977582|gb|EFW09254.1| hypothetical protein HMPREF9005_1769 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 449

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
            ++D  TG  + +        PAS+TK +TA    + L  
Sbjct: 84  LVVDGTTGEELLDAAAGTAHMPASVTKTLTALTALTHLDP 123


>gi|61744055|gb|AAX55643.1| beta-lactamase A [Yersinia enterocolitica]
          Length = 294

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 71/263 (26%), Gaps = 22/263 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-----YYT-----------LLDTNTG-HVIA 43
           +R+ L++  + +    F   + A                         +++T  G  ++ 
Sbjct: 6   LRRALLLAGITLPLVNFSLPTWAAAIPGSLDKQLAALEHSANGRLGIAMINTGNGTKILY 65

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
                  +   S  K M A  V    + +  +L   I   ++        +       MT
Sbjct: 66  -RGA-RRFPFCSTFKFMLAAAVLGQSQSQPNLLNKHINYHESDLLSYAPITRKNLAHGMT 123

Query: 104 LDNALKLLIVKSANDIAVAIAESLC--KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       I  S N  A  + + L       +F + + +    L         A      
Sbjct: 124 VSELCAATIQYSDNTAANLLLKELGGLAAVNQFARSIGDQMFRLDRWEPDLNTALPNDPR 183

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF- 220
              T A   A ++  +  D        Q+            T  A        G KTG  
Sbjct: 184 DTTTPAAMAASINKLVLGDALHPAQRSQLTAWLKGNTTGDATIRAGAPTDWIVGDKTGSG 243

Query: 221 TCASGFNIVASAIQGDQSLIAVI 243
              +  +I          ++ V+
Sbjct: 244 DYGTTNDIAVLWPTKGAPIVLVV 266


>gi|55167237|dbj|BAD67445.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|168491624|ref|ZP_02715767.1| penicillin-binding protein 1b [Streptococcus pneumoniae CDC0288-04]
 gi|38141959|dbj|BAD00782.1| penicillin-binding protein 1B [Streptococcus pneumoniae]
 gi|183573983|gb|EDT94511.1| penicillin-binding protein 1b [Streptococcus pneumoniae CDC0288-04]
          Length = 821

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|311895900|dbj|BAJ28308.1| putative hydrolase [Kitasatospora setae KM-6054]
          Length = 276

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNP-ASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  ++  + G ++  + P     P AS+TKL++AY V   ++E    L  P
Sbjct: 11 PVPHAAAAVVRGSDGALLGAHGPQDHLFPLASVTKLLSAYAVLVAVEEGVFELDDP 66


>gi|307705758|ref|ZP_07642603.1| penicillin-binding protein 1B [Streptococcus mitis SK597]
 gi|307620676|gb|EFN99767.1| penicillin-binding protein 1B [Streptococcus mitis SK597]
          Length = 815

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|82569258|emb|CAJ43422.1| class A Beta-lactamase [Yersinia enterocolitica]
          Length = 291

 Score = 40.3 bits (92), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 71/263 (26%), Gaps = 22/263 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP-----YYT-----------LLDTNTG-HVIA 43
           +R+ L++  + +    F   + A                         +++T  G  ++ 
Sbjct: 6   LRRALLLAGITLPLVNFSLPTWAAAIPGSLDKQLAALEHSANGRLGIAMINTGNGTKILY 65

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
                  +   S  K M A  V    + +  +L   I   ++        +       MT
Sbjct: 66  -RGA-RRFPFCSTFKFMLAAAVLGQSQSQPNLLNKHINYHESDLLSYAPITRKNLAHGMT 123

Query: 104 LDNALKLLIVKSANDIAVAIAESLC--KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       I  S N  A  + + L       +F + + +    L         A      
Sbjct: 124 VSELCAATIQYSDNTAANLLLKELGGLAAVNQFARSIGDQMFRLDRWEPDLNTALPNDPR 183

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF- 220
              T A   A ++  +  D        Q+            T  A        G KTG  
Sbjct: 184 DTTTPAAMAASINKLVLGDALHPAQRSQLTAWLKGNTTGDATIRAGAPTDWIVGDKTGSG 243

Query: 221 TCASGFNIVASAIQGDQSLIAVI 243
              +  +I          ++ V+
Sbjct: 244 DYGTTNDIAVLWPTKGAPIVLVV 266


>gi|139439565|ref|ZP_01772997.1| Hypothetical protein COLAER_02024 [Collinsella aerofaciens ATCC
           25986]
 gi|133775118|gb|EBA38938.1| Hypothetical protein COLAER_02024 [Collinsella aerofaciens ATCC
           25986]
          Length = 357

 Score = 40.3 bits (92), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 14/147 (9%)

Query: 30  YYTLLDTNT-----GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS- 83
           Y   LD  T     G V     PD     AS+ KL         +   +  L   IT++ 
Sbjct: 116 YAVALDPQTFASLDGEVAVA--PDARRVAASIIKLPILACALETVTAGELSLDEQITVTQ 173

Query: 84  KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSK 143
           ++      +  +   G +  +D  L  +I +S N  A  +   L       +  +N T  
Sbjct: 174 QDIVGGSGNIQSRGAGVSYGIDELLHAMIAQSDNVAANLVIGRL------GMDTVNETCA 227

Query: 144 NLGLSATHFMNAHGVVQHGHYTTARDM 170
            LGL+ T         +          
Sbjct: 228 ALGLTQTVLARLMMDTEAQAQGRENYT 254


>gi|182685034|ref|YP_001836781.1| penicillin-binding protein 1B [Streptococcus pneumoniae CGSP14]
 gi|182630368|gb|ACB91316.1| penicillin-binding protein 1B [Streptococcus pneumoniae CGSP14]
          Length = 825

 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 429 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 488

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 489 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 546

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 547 GYEIPEYGIESLPMGGGIEVTVAQH 571


>gi|14578573|gb|AAK52324.1| class A beta-lactamase precursor [Burkholderia pseudomallei]
          Length = 295

 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 81/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L    +    A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRRESELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|192288797|ref|YP_001989402.1| beta-lactamase [Rhodopseudomonas palustris TIE-1]
 gi|192282546|gb|ACE98926.1| Beta-lactamase [Rhodopseudomonas palustris TIE-1]
          Length = 291

 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 64/214 (29%), Gaps = 4/214 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LDT +G +I  +  D  +   S  K++ A +V + +  K+  L   ++ +K+       
Sbjct: 50  VLDTASGRMI-GHRLDERFPMCSTFKVLAAGLVLARVDRKQEKLDRRVSYAKSNLVTYSP 108

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +       MT+    +  I  S N  A  +  +         F + + + +  L    T
Sbjct: 109 ATEKHVEDGMTIAELCEAAITLSDNTAANLLLASFGGPAGLTAFARSLGDETTRLDRIET 168

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
               A         +       L      D        Q+               A    
Sbjct: 169 ELNEALPGDPRDTTSPRAMAQDLRALTLGDALSPASRAQLITWLKANTTGGTRLRAGVPP 228

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
               G KTG       N +A      +  LI  +
Sbjct: 229 GWTVGDKTGTGSRGTANDIAVLWPPQRAPLIVTV 262


>gi|229085614|ref|ZP_04217846.1| Beta-lactamase [Bacillus cereus Rock3-44]
 gi|228697694|gb|EEL50447.1| Beta-lactamase [Bacillus cereus Rock3-44]
          Length = 250

 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 54/204 (26%), Gaps = 10/204 (4%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFK 97
           G +  +         ASL KL         ++E        I++ S   +       +  
Sbjct: 27  GAITYQCNEQLIHPAASLIKLPILSCAIEKIREGTLHPFELISVLSLEKAGGSGVVDSLH 86

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
             +    D    ++ V         I +      +  +  M      L       +   G
Sbjct: 87  TPTVTMQDLITLMITVSDNTATNWLINKLEMNHIQTHIDSMQLYGTKLQRYMMQTLKEQG 146

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
                ++TTA D+  L      +  Q+ +  Q +    K           G    A   K
Sbjct: 147 RD---NFTTAEDIVFLLKH-YENEKQFYNLLQNQQFTYKLCG-----RLEGMKGVATANK 197

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
           TG       +     +      IA
Sbjct: 198 TGELQTVTHDAARLIVNNKTVYIA 221


>gi|118473563|ref|YP_886995.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
 gi|33188340|gb|AAP97895.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
 gi|118174850|gb|ABK75746.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
          Length = 293

 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 75/260 (28%), Gaps = 20/260 (7%)

Query: 2   RQFLVIIAMAMLSNI---FPFLSIAE-----------TNKLPYYTLLDTNTGHVIAENYP 47
           R+ ++I ++A+++      P  S A             N       +D ++      +  
Sbjct: 6   RRSVLIGSLAVMAAAGVRMPTASAAPVDDRIADLERRNNASIGIYAVDLDSNRT-VAHRA 64

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  +   S  K   A  +    +  +  L   + +   A       +    G  MTL   
Sbjct: 65  DDSFAMCSTFKAYLAARILRGAERGELSLDDRVFVDPAALLSNSPITETHAGGEMTLAEL 124

Query: 108 LKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
            +  + +S N  A  + + +    +   F + + +    L    T   +A         T
Sbjct: 125 CQAALQRSDNAAANLLLKQIGGPAEITAFARSIGDQRTRLDRWETELNSAVPGDPRDTST 184

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
            A         +  D         +   E       ++  A          KTG      
Sbjct: 185 PAALAGGFRAVLTGDVLAPPQRQLL--DEWMRANETSSLRAGLPDGWTSADKTGSGDYGS 242

Query: 226 FNIVASAI-QGDQSLIAVIL 244
            N V  A     Q ++  ++
Sbjct: 243 TNDVGIAYGPQGQRILLALM 262


>gi|2565295|gb|AAB81957.1| extended spectrum beta-lactamase [Nocardia farcinica]
          Length = 297

 Score = 40.3 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 58/213 (27%), Gaps = 3/213 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G  +A    D  +  AS  K +    +              +  S+         
Sbjct: 58  VDTTSGAEVAYR-ADERFGMASTFKGLACGALLREHPLSSGYFDQVVRYSREEVVSYSPV 116

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +  +  + MT+       I  S N     I +          F++ + +    L    T 
Sbjct: 117 TETRVDTGMTVAELCHATITVSDNTAGNQILKLLGGPAGFTAFLRSLGDEVSRLDRWETE 176

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                   +    T A   A     +  D        Q++   +          A     
Sbjct: 177 LNEVPPGEERDTTTPAAVAANYRALVLGDVLAEPERAQLRDWLVANTTGDQRIRAGVPAG 236

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
              G KTG     G N VA A       I + L
Sbjct: 237 WTVGDKTGGGSHGGNNDVAVAWTETGDPIVIAL 269


>gi|282881915|ref|ZP_06290560.1| beta-lactamase [Peptoniphilus lacrimalis 315-B]
 gi|281298190|gb|EFA90641.1| beta-lactamase [Peptoniphilus lacrimalis 315-B]
          Length = 262

 Score = 40.3 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 4/214 (1%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST-MTL 104
             D     AS+ KL+    + +  K  K  L T I + K                   ++
Sbjct: 38  NEDKKVRSASMIKLLIMAEIMNQSKNGKISLDTKIKVGKKDKVGGSGILKEFDCEHEFSI 97

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
              + L+I+ S N     + + +         + +N  S +L                 +
Sbjct: 98  KELMTLMIIVSDNQATNILIDLVGMDNINLMGKRLNLKSASLQRKMMDIKALE--KGRDN 155

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           Y +A+D+ ++  +I           ++    +  +                  KTG    
Sbjct: 156 YISAKDVKVILEKIYRKTLVDEKSSELMLDILLRQHERQRLGRFLDEEVKIASKTGDLDK 215

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKVSA 257
              +     ++    ++ V++     N   + + 
Sbjct: 216 LENDGGIFFLENKNYILVVLIDDAVTNAMAQETI 249


>gi|2497582|sp|P96465|BLA2_STEMA RecName: Full=Beta-lactamase L2; AltName: Full=Penicillinase;
           Flags: Precursor
 gi|1870143|emb|CAA69869.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 303

 Score = 40.3 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 2/115 (1%)

Query: 11  AMLSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           A L+    F ++ +  +  +   LLDT +G  I  +  D  +   S  K + A  V S  
Sbjct: 39  AALTAATDFAALEKAVRGRFGVTLLDTASGRRI-GHRQDERFPMCSTFKSVLAATVLSQA 97

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           + + A+L T + +           +    G  MT+ +  +  I+ S N  A  + 
Sbjct: 98  ERQPALLDTRVPVRDADLLSHAPVTRRHAGKDMTVRDLCRATIITSDNTAANLLF 152


>gi|194397279|ref|YP_002038687.1| penicillin-binding protein 1B [Streptococcus pneumoniae G54]
 gi|194356946|gb|ACF55394.1| penicillin-binding protein 1B [Streptococcus pneumoniae G54]
          Length = 821

 Score = 40.0 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYXIPEYGIESLPMGGGIEVTVAQH 567


>gi|219920977|emb|CAQ76666.1| beta-lactamase [Klebsiella oxytoca]
          Length = 273

 Score = 40.0 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 72/258 (27%), Gaps = 18/258 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAENYPD 48
           +  L+  A+ +L       + A+  +                 L++  +    +     D
Sbjct: 8   KTALMAAAVPLLLASGSLWASADAIQQKLADLEKRSGGRLGVALINTADDSQTLY--RGD 65

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M A  V    +    ++   + I K+        +     S MTL    
Sbjct: 66  ERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITEKHLQSGMTLAELS 125

Query: 109 KLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N     +   L   EK   F Q + + +  L  +     +A    +    T 
Sbjct: 126 AAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALNSAIPGDKRDTTTP 185

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
                 L      +        Q+            +  A      A G KTG       
Sbjct: 186 LAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDKTGAGDYGTT 245

Query: 227 NIVASAIQGDQ-SLIAVI 243
           N +A     +   L+ V 
Sbjct: 246 NDIAVIWPENHAPLVLVT 263


>gi|167742293|ref|ZP_02415067.1| class A beta-lactamase [Burkholderia pseudomallei 14]
          Length = 314

 Score = 40.0 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLACSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGLQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|159029388|emb|CAO90764.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 306

 Score = 40.0 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA----MLTTPITISKNASEY 89
           +D  T  VI  +  D  + PAS TKL T       +  +       L   + I+   S  
Sbjct: 97  IDRQT--VIYSHNADRYFIPASNTKLFTTAAALQAMNPETTIQKKSLRDWVNITNQRSNN 154

Query: 90  PP 91
             
Sbjct: 155 FY 156


>gi|54307804|ref|YP_128824.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Photobacterium
          profundum SS9]
 gi|46912227|emb|CAG19022.1| hypothetical D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Photobacterium profundum SS9]
          Length = 472

 Score = 40.0 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 18/53 (33%)

Query: 13 LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            N    ++           ++D  T  V+     +    PAS  K++TA   
Sbjct: 24 AFNPQAAINKLPNGHDLALMIVDPATNQVLYSQRTEQLQAPASTQKVITALAA 76


>gi|13399765|pdb|1G68|A Chain A, Pse-4 Carbenicillinase, Wild Type
          Length = 271

 Score = 40.0 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 66/212 (31%), Gaps = 3/212 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LDT  G    +   +  +   S  K +    +    ++ K    + + I K        
Sbjct: 27  VLDTQNGE-YWDYNGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSP 85

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSAT 150
               + G  +TLD+A    +  S N  A  I  ++   K    F++ + +    L     
Sbjct: 86  VIEKQVGQAITLDDACFATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEP 145

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T     + L+  +       M+  +++   +  +   N   +V   
Sbjct: 146 DLNEGKLGDLRDTTTPKAIASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPA 205

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                 ++G       +I A      Q+ I V
Sbjct: 206 GWNIADRSGAGGFGARSITAVVWSEHQAPIIV 237


>gi|322689832|ref|YP_004209566.1| hypothetical protein BLIF_1651 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461168|dbj|BAJ71788.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 496

 Score = 40.0 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDASVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|23466227|ref|NP_696830.1| hypothetical protein BL1679 [Bifidobacterium longum NCC2705]
 gi|23326972|gb|AAN25466.1| hypothetical secreted protein with D-Ala-D-Ala carboxypeptidase 3
           (S13) domain [Bifidobacterium longum NCC2705]
          Length = 496

 Score = 40.0 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDASVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|325305941|gb|ADZ11075.1| beta-lactamase SHV [Klebsiella pneumoniae]
          Length = 140

 Score = 40.0 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 35/136 (25%), Gaps = 2/136 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D ++G  +     D  +   S  K++    V + +      L   I   +         
Sbjct: 5   MDLDSGRTLTAWCSDERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPV 64

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATH 151
           S       MT+       I  S N     +            F++ +      L    T 
Sbjct: 65  SEKHLADGMTVGELCAAAITMSENSATNLLLATVGGPAGLTAFLRQIGENVTRLDRWETE 124

Query: 152 FMNAHGVVQHGHYTTA 167
              A         T A
Sbjct: 125 LNEALPGDSRDTTTPA 140


>gi|317033957|ref|XP_001395702.2| transesterase [Aspergillus niger CBS 513.88]
          Length = 407

 Score = 40.0 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 12/32 (37%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          P      AS+TKLMT       ++     L  
Sbjct: 64 PQSVMAFASMTKLMTCIAALQLVERGTISLDD 95


>gi|255534168|ref|YP_003094540.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Pedobacter heparinus
           DSM 2366]
 gi|255347152|gb|ACU06478.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Pedobacter heparinus
           DSM 2366]
          Length = 450

 Score = 40.0 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 21  SIAETNKLPYY--TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           + +   K  Y    L D  T  ++ E + D  + PAS TKL T Y     L +    L
Sbjct: 48  ADSPVLKKYYAGFALYDMATARMLFERHADQYFTPASNTKLFTFYAGLKMLPDSIPSL 105


>gi|134080426|emb|CAK41175.1| unnamed protein product [Aspergillus niger]
          Length = 380

 Score = 40.0 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 12/32 (37%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          P      AS+TKLMT       ++     L  
Sbjct: 64 PQSVMAFASMTKLMTCIAALQLVERGTISLDD 95


>gi|20148751|gb|AAM10778.1| beta-lactamase precursor 1m [Burkholderia pseudomallei]
          Length = 295

 Score = 40.0 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L    +    A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRRESELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|317129059|ref|YP_004095341.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacillus cellulosilyticus DSM 2522]
 gi|315474007|gb|ADU30610.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacillus cellulosilyticus DSM 2522]
          Length = 494

 Score = 40.0 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            TG ++ E   +    PAS  K++T+     
Sbjct: 63 FQTGELLYEQNVNQLLTPASNMKILTSIAALE 94


>gi|87311341|ref|ZP_01093462.1| Serine-type D-Ala-D-Ala carboxypeptidase [Blastopirellula marina
          DSM 3645]
 gi|87285921|gb|EAQ77834.1| Serine-type D-Ala-D-Ala carboxypeptidase [Blastopirellula marina
          DSM 3645]
          Length = 366

 Score = 40.0 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 3/47 (6%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          + D  TG        D  +   S TK MT  V+   ++  K  L   
Sbjct: 45 VADLKTGQ---SMQTDMAFRIGSNTKTMTGVVILQLVQAGKIKLDDK 88


>gi|289673757|ref|ZP_06494647.1| D-alanyl-D-alanine endopeptidase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 136

 Score = 40.0 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 5/79 (6%)

Query: 189 QIKGLEIKGKKYP----NTNWAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           + K +  +   Y     NT+  V          KTGFT  +G  +V      ++ +  VI
Sbjct: 25  EQKTVTFRKPTYTLGFSNTDHLVRKDNWDIKLTKTGFTNQAGHCLVLLTSMANRPVSVVI 84

Query: 244 LGALDRNTRNKVSASLLSM 262
           L A  + T    ++ +   
Sbjct: 85  LDAFGKYTHFADASRIRKW 103


>gi|330997248|ref|ZP_08321101.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Paraprevotella xylaniphila YIT 11841]
 gi|329571043|gb|EGG52750.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Paraprevotella xylaniphila YIT 11841]
          Length = 404

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D     ++          PAS  KL+TA    S 
Sbjct: 66  VYDLTDDTLLYAYQAKQRMRPASTEKLVTAVTALSE 101


>gi|317474687|ref|ZP_07933961.1| D-Ala-D-Ala carboxypeptidase 3 family protein [Bacteroides
          eggerthii 1_2_48FAA]
 gi|316909368|gb|EFV31048.1| D-Ala-D-Ala carboxypeptidase 3 family protein [Bacteroides
          eggerthii 1_2_48FAA]
          Length = 476

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 12/34 (35%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          + D      + +   D    PAS  KL+T     
Sbjct: 54 VYDLTANEALYDYQADKLSRPASTMKLLTTITAL 87


>gi|218131692|ref|ZP_03460496.1| hypothetical protein BACEGG_03313 [Bacteroides eggerthii DSM
          20697]
 gi|217985995|gb|EEC52334.1| hypothetical protein BACEGG_03313 [Bacteroides eggerthii DSM
          20697]
          Length = 476

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 12/34 (35%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          + D      + +   D    PAS  KL+T     
Sbjct: 54 VYDLTANEALYDYQADKLSRPASTMKLLTTITAL 87


>gi|191639712|ref|YP_001988878.1| Beta-lactamase [Lactobacillus casei BL23]
 gi|190714014|emb|CAQ68020.1| Beta-lactamase [Lactobacillus casei BL23]
 gi|327383826|gb|AEA55302.1| Possible beta-lactamase class A [Lactobacillus casei LC2W]
 gi|327387005|gb|AEA58479.1| Possible beta-lactamase class A [Lactobacillus casei BD-II]
          Length = 261

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 7/216 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
            +  L+  +T HV+     D P+  ASL KL  A  V     +  + L     ++   S 
Sbjct: 20  KHALLV-ADTRHVLFGAQVDQPFPAASLIKLGIAAFVKEKAADDPSQL--ERQVTLPESV 76

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                  F       + + L L++  S N    A+  +           +      + L 
Sbjct: 77  GGAGILRFMSPQAWRVRDLLTLMLTVSDNLATNALLTTYGL--PTIAAWLTRHYPGVQLR 134

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                +          + A  +         + P      Q    +    K       + 
Sbjct: 135 RPLMQSTFDGDNMITASAAWQLLRALLTSDGNEPAADICAQALRHQQNRTKLL-LAPTME 193

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            F+G    KTG       +    A    + L AV+L
Sbjct: 194 NFVGWLAGKTGELPHCEHDAACFAA-EGERLYAVVL 228


>gi|223937348|ref|ZP_03629253.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [bacterium Ellin514]
 gi|223893899|gb|EEF60355.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [bacterium Ellin514]
          Length = 802

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 21/77 (27%), Gaps = 18/77 (23%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAE------TNKLPYYTL----------LDTNTGHVIAE 44
          M++   +  +  L++     +                             D  T     +
Sbjct: 1  MKKVATLFVLLTLASFSARSTAQPIPDRIDAILARAAVATNIWSVFIQSADGTTTD--YQ 58

Query: 45 NYPDHPWNPASLTKLMT 61
            PD    PAS TKL T
Sbjct: 59 RNPDTGLAPASNTKLYT 75


>gi|157835243|pdb|2JCH|A Chain A, Structural And Mechanistic Basis Of Penicillin Binding
           Protein Inhibition By Lactivicins
          Length = 461

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 97  VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 156

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 157 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 214

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 215 GYEIPEYGIESLPMGGGIEVTVAQH 239


>gi|311745180|ref|ZP_07718965.1| beta-lactamase [Algoriphagus sp. PR1]
 gi|126577702|gb|EAZ81922.1| beta-lactamase [Algoriphagus sp. PR1]
          Length = 438

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 13/55 (23%)

Query: 38  TGHVIAEN-------------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            G V+                  D  +   S+TK+ T  +V   ++E K  L   
Sbjct: 49  NGEVLYARSLGFKDIEEGVKLEEDTQFRVGSITKMFTTVLVLQAVEEGKLKLDQK 103


>gi|307710187|ref|ZP_07646631.1| penicillin-binding protein 1B [Streptococcus mitis SK564]
 gi|307619167|gb|EFN98299.1| penicillin-binding protein 1B [Streptococcus mitis SK564]
          Length = 821

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 425 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 484

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 485 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 542

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 543 GYEIPEYGIESLPMGGGIEVTVAQH 567


>gi|227539858|ref|ZP_03969907.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240136|gb|EEI90151.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 366

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 55/210 (26%), Gaps = 19/210 (9%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +N ASLTK +TA V    +   K  L  P+ +     E                  
Sbjct: 87  ENTLFNVASLTKPVTAIVALKLVSLGKWNLDEPLYMYWTDPEI--------ANDPRHQQL 138

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
             +L++                   KK     +  +K       +      + +  + + 
Sbjct: 139 TTRLVLSHQTGFA----NWRWENENKKLGFQFDPGTKYQYSGEGYEYLRKALEKKFNKSL 194

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
            +    L +R          + +          Y N      ++             +  
Sbjct: 195 QQLADELVFRPIKMPDTQYIWNKDTDSTRLAVGYDN---KGNSYPVVK----NREPNAAD 247

Query: 227 NIVASAIQGDQSLIAVILGALDRNTRNKVS 256
           +++ S     + LI+V+ G           
Sbjct: 248 DLMTSIEDYGKFLISVMNGEGLSKKVFDEM 277


>gi|163841948|ref|YP_001626353.1| D-alanyl-meso-diaminopimelate endopeptidase [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955424|gb|ABY24939.1| D-alanyl-meso-diaminopimelate endopeptidase [Renibacterium
           salmoninarum ATCC 33209]
          Length = 475

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           +LD  +G V+ +   + P  PAS  KL+TA  V   
Sbjct: 94  VLDAASGAVLFDRKSEAPSIPASNLKLLTAAAVLKN 129


>gi|152975953|ref|YP_001375470.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024705|gb|ABS22475.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cytotoxicus NVH
           391-98]
          Length = 369

 Score = 40.0 bits (91), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 42/174 (24%), Gaps = 4/174 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    PD     AS  KL+ A      + E K    +   +S +    
Sbjct: 51  SALLI-KRNDKVVYSVNPDVVLPVASTMKLIVALEFTKQVTEGKIDPNS--YVSIHDVNR 107

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
               +T             +   +         +A  + K               L    
Sbjct: 108 YYVPNTDGGAQERWQKYLQRKGKIDENAVSLEEVARGMMKFSSNANAEYLMEKLGLDNVN 167

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +      +  H           +   +  +     +  + K  E+  ++Y   
Sbjct: 168 QNLK-KLALPSHEPLFPIVSSLYIPGYLHKELHVPKYQIEKKLKEMSQEQYRQY 220


>gi|148657765|ref|YP_001277970.1| beta-lactamase [Roseiflexus sp. RS-1]
 gi|148569875|gb|ABQ92020.1| beta-lactamase [Roseiflexus sp. RS-1]
          Length = 357

 Score = 40.0 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
             + D  +G ++    PD P+  AS+TK+ TA ++    ++++  L
Sbjct: 40 AAGVADPGSGAMM---QPDTPYFIASITKMYTAAIIMQLYEQQRLDL 83


>gi|327356868|gb|EGE85725.1| beta-lactamase [Ajellomyces dermatitidis ATCC 18188]
          Length = 404

 Score = 40.0 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 14/54 (25%)

Query: 39 GHVIAENY--------------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          G V+  +                D P+  AS+TK+ TA  V   ++     L  
Sbjct: 33 GKVLYSSSHGNTKVDGSGEAVTEDTPFYTASMTKVFTAVAVMVAVERGLITLDD 86


>gi|261191584|ref|XP_002622200.1| beta-lactamase [Ajellomyces dermatitidis SLH14081]
 gi|239589966|gb|EEQ72609.1| beta-lactamase [Ajellomyces dermatitidis SLH14081]
 gi|239612626|gb|EEQ89613.1| beta-lactamase [Ajellomyces dermatitidis ER-3]
          Length = 411

 Score = 40.0 bits (91), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 14/54 (25%)

Query: 39 GHVIAENY--------------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          G V+  +                D P+  AS+TK+ TA  V   ++     L  
Sbjct: 33 GKVLYSSSHGNTKVDGSGEAVTEDTPFYTASMTKVFTAVAVMVAVERGLITLDD 86


>gi|310779226|ref|YP_003967559.1| NLP/P60 protein [Ilyobacter polytropus DSM 2926]
 gi|309748549|gb|ADO83211.1| NLP/P60 protein [Ilyobacter polytropus DSM 2926]
          Length = 260

 Score = 40.0 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 56/208 (26%), Gaps = 2/208 (0%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           + +   V+  +  +  +   ++ K+M        ++E    L   I I +    Y     
Sbjct: 22  NLSDNKVLVSHRCNKVFRSPTVMKIMVMVEALKEVEEGHNTLDDRIEIKETGISYLSLIR 81

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
                S    D  + ++       I   +     +     +  M      +      F  
Sbjct: 82  DLSISSYTLKDLIILMMTANDYTAINTLLNLFGLEKINNRIDKMGLLDTKVQRKMLDFYA 141

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
                   + T+ RDM+ +  RI               +E+   +               
Sbjct: 142 IE--KGKDNVTSIRDMSNILERIYNRSVFKYREISDFSVEMLKYQRVGRGVRNYIPEWES 199

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAV 242
             ++G       +I    ++    ++ V
Sbjct: 200 TYRSGEVGDFYHDIGIVFLENAHYILGV 227


>gi|327388834|gb|EGE87182.1| penicillin-binding protein 1b [Streptococcus pneumoniae GA04375]
          Length = 751

 Score = 40.0 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 355 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 414

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 415 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYC--TYRMLREKGVDVKGYMEKM 472

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 473 GYEIPEYGIESLPMGGGIEVTVAQH 497


>gi|298483268|ref|ZP_07001447.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. D22]
 gi|298270585|gb|EFI12167.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. D22]
          Length = 468

 Score = 40.0 bits (91), Expect = 0.53,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++ +++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVTLSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|293371180|ref|ZP_06617716.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides ovatus SD CMC 3f]
 gi|292633741|gb|EFF52294.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides ovatus SD CMC 3f]
          Length = 468

 Score = 40.0 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 23/77 (29%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIF----------PFLSIAETNKLPYYT-LLDTNTGHVIAENYPDH 49
          M++ L+++ +++                 +             + D      +     + 
Sbjct: 1  MKKSLLLVTLSVCLLPLWGQQNFSRIDSLIKKMLPEASEVGISVYDLTAKKSLYNYRAEK 60

Query: 50 PWNPASLTKLMTAYVVF 66
             PAS  KL+TA    
Sbjct: 61 LSRPASTMKLLTAITAL 77


>gi|194016709|ref|ZP_03055322.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bacillus pumilus ATCC 7061]
 gi|194011315|gb|EDW20884.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bacillus pumilus ATCC 7061]
          Length = 494

 Score = 40.0 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 28/108 (25%)

Query: 1   MRQFLVIIAM---AMLSNIFPFLSIAETNKL---------------------PYYT---- 32
           M++F  I+ +    +     PF +  +                                 
Sbjct: 1   MKRFSQILFLHICILSILFLPFSAKDDQLTARDDSLPWVTALDEFIRTAPGLEGAISGIS 60

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           + DT+   ++ E+  D    PAS  KL+T+ +    L E     T   
Sbjct: 61  VRDTSDSSLLYEHQADIRLTPASNMKLLTSAIALDILGETHTFPTDIW 108


>gi|167914578|ref|ZP_02501669.1| class A beta-lactamase [Burkholderia pseudomallei 112]
 gi|217418871|ref|ZP_03450378.1| class A beta-lactamase [Burkholderia pseudomallei 576]
 gi|217398175|gb|EEC38190.1| class A beta-lactamase [Burkholderia pseudomallei 576]
          Length = 314

 Score = 40.0 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGLQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|17066640|gb|AAL35335.1|AF441238_1 beta-lactamase precursor 1c [Burkholderia pseudomallei]
          Length = 295

 Score = 40.0 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGLQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|227513578|ref|ZP_03943627.1| class A beta-lactamase [Lactobacillus buchneri ATCC 11577]
 gi|227083451|gb|EEI18763.1| class A beta-lactamase [Lactobacillus buchneri ATCC 11577]
          Length = 250

 Score = 40.0 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 54/217 (24%), Gaps = 14/217 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             +  +  ASL KL     V          L   I + ++                  L 
Sbjct: 35  NANKAFRSASLIKLAILNDVLDS----HFDLDKEIHVRRDKLVGGAGVLQLLSERIFQLK 90

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L L+I  S N     + + +       + H+N     +G   T               
Sbjct: 91  DLLALMISVSDNSATNLVIDLI------GMDHVNQYLSKMGFYKTRLNRYLMDTNALENG 144

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCAS 224
                     +   +     H         +  +Y        T  G     KTG     
Sbjct: 145 KDNYTTPAESQRLLEMAIANHPMTKTWFLNQQFRYKLPGDFDETGNGIQVYNKTGEGYQI 204

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             ++          +I++ L      +R   +  L +
Sbjct: 205 DHDVAEFVY--GNKVISIALLTFGSRSRMN-TIRLFN 238


>gi|118467441|ref|YP_890415.1| beta-lactamase related protein [Mycobacterium smegmatis str. MC2
           155]
 gi|118168728|gb|ABK69624.1| beta-lactamase related protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 272

 Score = 40.0 bits (91), Expect = 0.54,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 71/235 (30%), Gaps = 22/235 (9%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                   + D NTG ++ E+ P+     AS+ K+     V    + +       +T + 
Sbjct: 14  DMAAWSVRITDLNTGEILWEHDPERVLKTASVGKIFLLAEVARRFENRTLDPAEIVTAAP 73

Query: 85  NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN 144
                        +G  + +D+   L+   S N     +   L       +  +   +K+
Sbjct: 74  EDVVADSGILYLLQGQDLRIDDLCLLIGAVSDNMATNILLRRL------GLDEVQRATKD 127

Query: 145 LGLSATHFMNAHGVVQHGHY-------TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           LG +A+   +   + +             A     ++     D        Q++      
Sbjct: 128 LGFTASGLRDRVRLNRSQDDPLTLSTGNAAELCEFVARLHSGDIHGAEVSRQVRTWLGVN 187

Query: 198 KKYPNTNWAVGTFL--------GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                   A G            A   KTG T +     +  A  GD+S+   +L
Sbjct: 188 TDLSMVARAFGLDPLAHTEPDRFALWNKTG-TISDARIDIGCATHGDRSVGYAVL 241


>gi|323691502|ref|ZP_08105773.1| beta-lactamase [Clostridium symbiosum WAL-14673]
 gi|323504475|gb|EGB20266.1| beta-lactamase [Clostridium symbiosum WAL-14673]
          Length = 262

 Score = 40.0 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 54/207 (26%), Gaps = 11/207 (5%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-YPPSNSTFKKGST 101
                D     AS+ KL+    +   +   +  L   I I++             + G  
Sbjct: 35  FSIDGDRRVPSASMIKLVIMAELMRRVCAGELSLEEKIKITQEMRTGGDGVLKELEPGHE 94

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            +L   L L+I+ S N+    + + L       +  +N  +  LGL            + 
Sbjct: 95  FSLREILTLMIIVSDNEATNILIQML------GMDRINRMAAELGLKEAVLGRKMMDSEA 148

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIK----GLEIKGKKYPNTNWAVGTFLGADGMK 217
                   +      +             K     L+I  ++  +    +      +   
Sbjct: 149 KKQGRDNFICADDIMLILKKIYEGSCVDRKASALMLDILKRQQQSGRLQLYLPEDVEVAH 208

Query: 218 TGFTCASGFNIVASAIQGDQSLIAVIL 244
                    N     +      I  +L
Sbjct: 209 KCGDLDFLENDGGIILLPGHPYILAVL 235


>gi|307710958|ref|ZP_07647381.1| penicillin-binding protein [Streptococcus mitis SK321]
 gi|307617198|gb|EFN96375.1| penicillin-binding protein [Streptococcus mitis SK321]
          Length = 823

 Score = 40.0 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG V+        +        D   +PAS TK + AY +         A + +
Sbjct: 426 VLMDNKTGAVLGFVGGRNYQTNQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSASILS 485

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +        ++   G     +       + +       +        K +++ M
Sbjct: 486 NYPTKFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 543

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 544 GYEIPEYGIESLPMGGGIEVTVAQH 568


>gi|164519444|pdb|2JCI|A Chain A, Structural Insights Into The Catalytic Mechanism And The
           Role Of Streptococcus Pneumoniae Pbp1b
          Length = 469

 Score = 40.0 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 104 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 163

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 164 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 221

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 222 GYEIPEYGIESLPMGGGIEVTVAQH 246


>gi|110591396|pdb|2FFF|B Chain B, Open Form Of A Class A Transpeptidase Domain
          Length = 453

 Score = 40.0 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 89  VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 148

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 149 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 206

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 207 GYEIPEYGIESLPMGGGIEVTVAQH 231


>gi|269929322|ref|YP_003321643.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
 gi|269788679|gb|ACZ40821.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
          Length = 269

 Score = 40.0 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 70/216 (32%), Gaps = 14/216 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN-ASEYPPSN 93
           D  TG  + E  P+  +  AS+ K+          +E    L   + +  +         
Sbjct: 28  DLTTGERL-EWSPETQFLAASIIKIPILVEGLRQAEEGTVRLDQMVPVPDDAKVGGFGIL 86

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                 ++++L + L L+I+ S N       + L       V+ +N T  +LGL+ T   
Sbjct: 87  KELTSVTSISLLDLLTLMIIVSDNTATNLCIDVL------GVESINRTIASLGLTGTQLQ 140

Query: 154 NAHGVVQH-----GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                 +       ++TT  D+A L   I T          +    +  ++  +      
Sbjct: 141 RKMMDYEARDRGLENFTTPADVARLLRLIATRQILTPEACDLALDIMARQQVRDRLPLYL 200

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                   KTG       +      +    +I V L
Sbjct: 201 PDDMRVAHKTGELSGVRHDAGVIFFESG-PVIVVAL 235


>gi|115018|sp|P28018|BLA1_BACMY RecName: Full=Beta-lactamase 1; AltName: Full=Beta-lactamase I;
           AltName: Full=Penicillinase; Flags: Precursor
 gi|580787|emb|CAA44161.1| beta-lactamase [Bacillus mycoides]
          Length = 306

 Score = 40.0 bits (91), Expect = 0.55,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I+  + +  +  AS  K + A V+          L   I  +K         
Sbjct: 69  IDTGTNQTISYRH-NERFAFASTYKALAAGVLLQQNSID--TLNEVIKFTKEDLVDYSPV 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N             K  +K ++ + +         T 
Sbjct: 126 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFHKIGGPKGYEKALRQIGDRVTMSDRFETE 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T     + L      +         +               A     
Sbjct: 186 LNEAIPGDIRDTSTAKAIASNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 246 WIVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 290


>gi|329948197|ref|ZP_08295069.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328522930|gb|EGF50035.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 470

 Score = 40.0 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 10  MAMLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            A+ S +    S A         +++D  TG  + + +      PAS  KL+TA+   S 
Sbjct: 72  AALTSYVQAVASDAALAGGGVTASVVDVATGEELLDQHAATGVTPASTNKLLTAWAALSS 131

Query: 69  LKEKK 73
           +    
Sbjct: 132 MGPGH 136


>gi|254369683|ref|ZP_04985693.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
          subsp. holarctica FSC022]
 gi|157122642|gb|EDO66771.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
          subsp. holarctica FSC022]
          Length = 464

 Score = 40.0 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|134302386|ref|YP_001122355.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. tularensis WY96-3418]
 gi|134050163|gb|ABO47234.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. tularensis WY96-3418]
          Length = 464

 Score = 40.0 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|294813957|ref|ZP_06772600.1| alkaline D-peptidase [Streptomyces clavuligerus ATCC 27064]
 gi|326442367|ref|ZP_08217101.1| peptidase [Streptomyces clavuligerus ATCC 27064]
 gi|294326556|gb|EFG08199.1| alkaline D-peptidase [Streptomyces clavuligerus ATCC 27064]
          Length = 412

 Score = 40.0 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              + D  TG           +   S+TK +TA VV +   E +  L   
Sbjct: 91  AAGVADLRTGE---RRGHHDRFRIGSVTKSLTAAVVLTLAAEGRLDLDDT 137


>gi|254389951|ref|ZP_05005173.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
 gi|197703660|gb|EDY49472.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces clavuligerus ATCC
           27064]
          Length = 386

 Score = 40.0 bits (91), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 3/50 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              + D  TG           +   S+TK +TA VV +   E +  L   
Sbjct: 65  AAGVADLRTGE---RRGHHDRFRIGSVTKSLTAAVVLTLAAEGRLDLDDT 111


>gi|227524722|ref|ZP_03954771.1| beta-lactamase class A [Lactobacillus hilgardii ATCC 8290]
 gi|227088206|gb|EEI23518.1| beta-lactamase class A [Lactobacillus hilgardii ATCC 8290]
          Length = 250

 Score = 40.0 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 54/217 (24%), Gaps = 14/217 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             +  +  ASL KL     V          L   + + ++                  L 
Sbjct: 35  NANKAFRSASLIKLAILNDVLDS----HFDLDKEVHVRRDKLVGGAGVLQLLSERIFQLK 90

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
           + L L+I  S N     + + +       + H+N     +G   T               
Sbjct: 91  DLLALMISVSDNSATNLVIDLI------GMDHVNQYLSKMGFYKTRLNRYLMDTNALENG 144

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCAS 224
                     +   +     H         +  +Y        T  G     KTG     
Sbjct: 145 KDNYTTPAESQRLLEMAIANHPMTKTWFLNQQFRYKLPGDFDETGNGIQVYNKTGEGYQI 204

Query: 225 GFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
             ++          +I++ L      +R   +  L +
Sbjct: 205 DHDVAEFVY--GNKVISIALLTFGSRSRMN-TIRLFN 238


>gi|212692426|ref|ZP_03300554.1| hypothetical protein BACDOR_01922 [Bacteroides dorei DSM 17855]
 gi|237711380|ref|ZP_04541861.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|212665005|gb|EEB25577.1| hypothetical protein BACDOR_01922 [Bacteroides dorei DSM 17855]
 gi|229454075|gb|EEO59796.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 466

 Score = 40.0 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL-----------PYYTLLDTNTGHVIAENYPDH 49
          M++ L    + +  +      +++                   + D   G  +     D 
Sbjct: 1  MKRVLFFFLLILSIHFINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTAGESVYRYQDDK 60

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS+ K++T+    
Sbjct: 61 LYRPASVEKIITSVTAL 77


>gi|115315185|ref|YP_763908.1| peptidase [Francisella tularensis subsp. holarctica OSU18]
 gi|290954548|ref|ZP_06559169.1| peptidase [Francisella tularensis subsp. holarctica URFT1]
 gi|295312010|ref|ZP_06802827.1| peptidase [Francisella tularensis subsp. holarctica URFT1]
 gi|115130084|gb|ABI83271.1| possible S13 family peptidase [Francisella tularensis subsp.
          holarctica OSU18]
          Length = 464

 Score = 40.0 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|237726157|ref|ZP_04556638.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229435965|gb|EEO46042.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 466

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL-----------PYYTLLDTNTGHVIAENYPDH 49
          M++ L    + +  +      +++                   + D   G  +     D 
Sbjct: 1  MKRVLFFFLLILSIHFINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTAGESVYRYQDDK 60

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS+ K++T+    
Sbjct: 61 LYRPASVEKIITSVTAL 77


>gi|167840682|ref|ZP_02467366.1| beta-lactamase precursor [Burkholderia thailandensis MSMB43]
          Length = 269

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + A+T         D  TG  +     D      PAS  K
Sbjct: 1   MKIRHALSSALVLLGCVAAPAHAKTLCTAIA---DATTGKFLL-KDGDCSRRATPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   ++        +  +          + +      + 
Sbjct: 57  IAMSLMGYDAGFLR--NEHEPVLPYRDGYVDWGGAAWKQPTDPTRWLKYSVVWYSQQITH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
           +  A  +A+              +  KN GL     
Sbjct: 115 HLGAQRVAQYAKAFGYGNADLSGDPGKNNGLDRAWI 150


>gi|543893|sp|Q06316|BLAC_NOCLA RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|581412|emb|CAA78373.1| cmcBla [Amycolatopsis lactamdurans]
          Length = 302

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 6/214 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G  +A    D  +  AS  K + A  V      ++  L   +  SK+        
Sbjct: 65  VDTGSGESVAFR-ADERFAFASTFKALAAAAVLDSTTPQQ--LDQVVRYSKDELLENSPI 121

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATH 151
           +     + MTL       +  S N     + + +   +     +  + +   +       
Sbjct: 122 TKDHVATGMTLRELCDAAVRFSDNTAGNLLLKHVGGPQGLDAALTAVGDEVTSADRWEPE 181

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
             +A         T       L   +  D         +     +         A     
Sbjct: 182 LNSAVPGDVRDTSTPRALAHDLRQFVLGDALAEDDRALLTDWLRRNTTGGTVIRAGVPAD 241

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL 244
              G KTG     G N +A     ++  ++  ++
Sbjct: 242 WVVGDKTGSGYYGGRNDIAVLWPPNRAPIVMAVM 275


>gi|307596398|ref|YP_003902715.1| hypothetical protein Vdis_2296 [Vulcanisaeta distributa DSM 14429]
 gi|307551599|gb|ADN51664.1| conserved hypothetical protein [Vulcanisaeta distributa DSM 14429]
          Length = 1121

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/235 (8%), Positives = 59/235 (25%), Gaps = 8/235 (3%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           +R++++I  +A++       ++       ++ + D     +  +   D+    A    L 
Sbjct: 14  IRRYVIITLIALILASIGAKALTPAVNSTHFIIYDLANAGLSYDQALDNYLEQA--YSLY 71

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T+ +             T   +S                +  T       +   + +   
Sbjct: 72  TSTLGMKMAPPCNGSQYTVYVVSSLPGSEAGITEWEYTYNPSTNQILSTCIEYINISAG- 130

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
                S       + + ++ +        T   N    ++     TA      +      
Sbjct: 131 ---LSSQWLEHTAYHELVHVSQWAYVQYTTIPQNYPWYIEADAEGTASYY--TNQCPMDQ 185

Query: 181 FPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                  ++    +  GK   N  +             G          ++++  
Sbjct: 186 DYFQYSQYEYDPYDYAGKPIINMYYYSAFIYWLIANGIGPATIEQNVFTSNSVIN 240


>gi|288924649|ref|ZP_06418586.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella buccae D17]
 gi|288338436|gb|EFC76785.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella buccae D17]
          Length = 424

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 12/36 (33%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            + D N    I          PAS  KL+TA     
Sbjct: 81  MVWDLNADSCIYARNARQLLRPASTMKLVTAITAID 116


>gi|227538729|ref|ZP_03968778.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241238|gb|EEI91253.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 396

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 55/223 (24%), Gaps = 23/223 (10%)

Query: 36  TNTGHVIAEN-------------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
              G +I E                   +  AS+TK MT+  +   ++E K  L   +  
Sbjct: 73  AKKGKIIYEKSFGWANYLLKDSLNIQSQFELASVTKPMTSIAILKLVEEGKLKLDQTVND 132

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                 Y              L N +                 ++               
Sbjct: 133 FFPDFPYEGITVKMLLTHRSGLPNYVY--FADGVWKDKKKGMSNMDAIRLLTEHKPGRYG 190

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH--------YFQIKGLE 194
           K  G    +  N   +       + +D A+       D     H        Y +I    
Sbjct: 191 KPDGRFHYNNSNFMVLGAIIEKVSKQDYAVFLKENVFDPAGMKHTAAYSKAVYEKIPVKV 250

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           I   K    +       G  G K  ++      ++  A++  +
Sbjct: 251 IGHDKIWRRSVVQNFLDGPLGDKGIYSTVEDMFLLDIALREGR 293


>gi|208779024|ref|ZP_03246370.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella novicida FTG]
 gi|208744824|gb|EDZ91122.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella novicida FTG]
          Length = 464

 Score = 40.0 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|320148807|gb|ADW20349.1| blaPME-1 [Pseudomonas aeruginosa]
          Length = 309

 Score = 40.0 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 59/222 (26%), Gaps = 10/222 (4%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
               LD  +G  +     D  +   S  KL+ A  V    ++ +   T PI  S +    
Sbjct: 54  GVFALDAGSGRSL-GWREDERFGMCSTFKLLLAATVLDAARQGRLDGTAPIHFSDDDLVP 112

Query: 90  PPSNSTFKK---GSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKN 144
                        ST+T     +   + S N  A  +       +      +   +    
Sbjct: 113 HSPVLREHLALGSSTLTAPELARATQLTSDNAAANLLIRKLGGPEAVTALWRASGDEVSR 172

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           L                   +       ++    ++        +++   ++        
Sbjct: 173 LDRLEPDMNLLPPGDLRDSTSPRAMAQHVARLFTSEMLVPEDRERLREWMVETGTGLARL 232

Query: 205 WAVGTFLGADGMKTGFTCA----SGFNIVASAIQGDQSLIAV 242
            A        G KTG   A    +  + VA      ++ + V
Sbjct: 233 RAATPPHWQAGDKTGSAIAPLMPNKTHDVAVFWPPGRAPVIV 274


>gi|71900554|ref|ZP_00682682.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Xylella fastidiosa
           Ann-1]
 gi|71729674|gb|EAO31777.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Xylella fastidiosa
           Ann-1]
          Length = 498

 Score = 40.0 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           D  TG V+         +PAS  KL+T Y  F
Sbjct: 69  DGKTGDVLYARNTWSRASPASNLKLVTLYSAF 100


>gi|171462981|ref|YP_001797094.1| Peptidoglycan glycosyltransferase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192519|gb|ACB43480.1| Peptidoglycan glycosyltransferase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 590

 Score = 40.0 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 33/133 (24%), Gaps = 24/133 (18%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHPW-------------- 51
            +  N           K     +LDT TG ++A        P+                 
Sbjct: 235 FLAYNAVKDAVEKHHAKAGGAVVLDTQTGEILALANYPSYNPNDRRFLTGEQLRNRVLTD 294

Query: 52  --NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
              P S  K +T  +             T + I       P   +       +T+   ++
Sbjct: 295 TFEPGSTMKPLTIAIALEK---GSVKSDTNMVIGAKYLVGPKPITDTHPYGNLTVAQIIQ 351

Query: 110 LLIVKSANDIAVA 122
                    IA+ 
Sbjct: 352 KSSNIGTAKIAMN 364


>gi|118497232|ref|YP_898282.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella tularensis
          subsp. novicida U112]
 gi|194323533|ref|ZP_03057310.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. novicida FTE]
 gi|118423138|gb|ABK89528.1| serine-type D-Ala-D-Ala carboxypeptidase [Francisella novicida
          U112]
 gi|194322388|gb|EDX19869.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. novicida FTE]
          Length = 464

 Score = 40.0 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|89256796|ref|YP_514158.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. holarctica LVS]
 gi|167010750|ref|ZP_02275681.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. holarctica FSC200]
 gi|89144627|emb|CAJ79948.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Francisella tularensis subsp. holarctica LVS]
          Length = 176

 Score = 40.0 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|117927409|ref|YP_871960.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Acidothermus cellulolyticus 11B]
 gi|117647872|gb|ABK51974.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Acidothermus cellulolyticus 11B]
          Length = 496

 Score = 40.0 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 30  YYTLL-DTNTGHVIAENYPDHPWNPASLTKL 59
              ++ D  TG V+ ++  +    PAS  K+
Sbjct: 107 AALVVTDPATGRVLLDDGGNRRMPPASTLKI 137


>gi|306836932|ref|ZP_07469884.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium accolens ATCC 49726]
 gi|304567187|gb|EFM42800.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Corynebacterium accolens ATCC 49726]
          Length = 430

 Score = 40.0 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++D+ TG V+ E+  D    PAS TK+
Sbjct: 86  VIDSETGTVVWESDADKALTPASSTKV 112


>gi|290475312|ref|YP_003468200.1| beta-lactamase [Xenorhabdus bovienii SS-2004]
 gi|289174633|emb|CBJ81427.1| Beta-lactamase (Penicillinase) [Contains: Beta-lactamase form I;
           Beta-lactamase form II] [Xenorhabdus bovienii SS-2004]
          Length = 296

 Score = 40.0 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 52/219 (23%), Gaps = 7/219 (3%)

Query: 30  YYTLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
              L+D  +   +         +   S +K+M    +    +  + +L   I   ++   
Sbjct: 52  GVVLIDTADHSTITY--RAHERFPLCSTSKMMAVSALLKKSETNEGLLNQRIHYQQSDIV 109

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLS 148
                +       MTL       I  S N     + + L  T        +       L 
Sbjct: 110 EYSPITEKHLKDGMTLAKLSAATIQYSDNTAMNLLIDQLGGTHDVTRFARSIGDNEFRLD 169

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI--KGKKYPNTNWA 206
                           TT       S              + + +E          +  A
Sbjct: 170 RKEPELNMVTPDDERDTTTPQAMADSLYKLALGNTLAATQRAQLVEWLKGNTTGGASIRA 229

Query: 207 VGTFLGADGMKTGFTCASGFNIVASAI--QGDQSLIAVI 243
                   G KTG       N +A     +    LI V 
Sbjct: 230 GVPDNWIVGDKTGRCDYGSTNDIAVIWPDKNKAPLILVT 268


>gi|126443150|ref|YP_001062378.1| class A beta-lactamase [Burkholderia pseudomallei 668]
 gi|126222641|gb|ABN86146.1| class A beta-lactamase [Burkholderia pseudomallei 668]
          Length = 314

 Score = 40.0 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 76/272 (27%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGHAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTFKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +    + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ----SLIAVILGALDRNTRNK 254
           N +  A   ++     +I   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIIYTTMRNPNAQARDD 300


>gi|124026237|ref|YP_001015353.1| putative beta-lactamase [Prochlorococcus marinus str. NATL1A]
 gi|123961305|gb|ABM76088.1| putative beta-lactamase [Prochlorococcus marinus str. NATL1A]
          Length = 357

 Score = 40.0 bits (91), Expect = 0.60,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 57/145 (39%), Gaps = 5/145 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
               +  +   V AE   D   + AS  K+    ++   L++++ +    + +S++    
Sbjct: 97  SAFFISLD-DQVYAEIKSDIKLSAASSIKVPILIILLRMLEKEEIIWNEKLILSEDVIGG 155

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                 +++   +     +   +++ +++ A  +           ++ +N   K +GL+ 
Sbjct: 156 GSGWIAYQEIGEIFPVYEVASEMIRVSDNTATNLL----IKRLGGIKRVNQKFKEIGLNN 211

Query: 150 THFMNAHGVVQHGHYTTARDMAILS 174
           T   N    +   + T+ +D+++  
Sbjct: 212 TQINNYLPDLDGTNLTSTKDLSLAM 236


>gi|307707770|ref|ZP_07644249.1| penicillin-binding protein 1B [Streptococcus mitis NCTC 12261]
 gi|307616268|gb|EFN95462.1| penicillin-binding protein 1B [Streptococcus mitis NCTC 12261]
          Length = 820

 Score = 40.0 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 40/145 (27%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG V+        +        D   +PAS TK + AY +         A + +
Sbjct: 426 VLMDNKTGAVLGFVGGRNYQTNQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSASILS 485

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +        ++   G     +       + +       +        K +++ M
Sbjct: 486 NYPTKFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 543

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 544 GYEIPEYGIESLPMGGGIEVTVAQH 568


>gi|307293773|ref|ZP_07573617.1| Beta-lactamase [Sphingobium chlorophenolicum L-1]
 gi|306879924|gb|EFN11141.1| Beta-lactamase [Sphingobium chlorophenolicum L-1]
          Length = 323

 Score = 40.0 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 1/44 (2%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           D +TG  +     D  +  AS  K+     + S L      L  
Sbjct: 61  DLSTGETL-AYNGDTLFPMASTYKVAVTAKILSLLDAGSLSLDE 103


>gi|261414981|ref|YP_003248664.1| Peptidoglycan glycosyltransferase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371437|gb|ACX74182.1| Peptidoglycan glycosyltransferase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327850|gb|ADL27051.1| putative penicillin-binding protein [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 628

 Score = 40.0 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 35/163 (21%), Gaps = 31/163 (19%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIA----------ENYP-----------DHPWNPASLTKL 59
               + K     ++D  TG ++A                            + P S  K+
Sbjct: 169 VAEFSAKSASAVVVDPYTGEILAMASYPTFDPNSKNQGGDRAGKNEIVSMSYEPGSTFKV 228

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +TA                                 +   S    D  +   +  S   +
Sbjct: 229 ITAAAALENNAVSP----------NKIFVNEGRCWQWNPRSEKICDTHVYGDMDMSEAMV 278

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
             +         +     M   ++  G+    F N  G     
Sbjct: 279 QSSNIVFAKIASEVGAMGMYRMARAFGIGERAFDNYVGEENGR 321


>gi|116693023|ref|YP_838556.1| Beta-lactamase [Burkholderia cenocepacia HI2424]
 gi|116651023|gb|ABK11663.1| Beta-lactamase [Burkholderia cenocepacia HI2424]
          Length = 312

 Score = 39.6 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 67/226 (29%), Gaps = 5/226 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G +I E+     +   S  K M +  V +   E+  +L   +T +K         
Sbjct: 73  IDTASGRII-EHRAGERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVTYTKADLVNYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    GS MT+    +  I  S N  A  + +          + + + + +  L    T 
Sbjct: 132 SEKHVGSGMTVAALCEAAIQYSDNSAANLLMKLIGGPSAVTAYARSIGDDTFRLDRWETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L      D        Q+       K       A     
Sbjct: 192 LNTALPGDPRDTTTPAAMAASLRVLTLGDALPAAQRAQLVAWLRGNKVGDKRIRAGVPAG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR-NTRNKV 255
              G KTG       N         +  ++  +     R + R K 
Sbjct: 252 WVVGDKTGTGDYGTTNDAGVIWPTSRAPIVLAVYYTQTRADARAKD 297


>gi|255534944|ref|YP_003095315.1| D-alanyl-D-alanine carboxypeptidase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341140|gb|ACU07253.1| D-alanyl-D-alanine carboxypeptidase [Flavobacteriaceae bacterium
           3519-10]
          Length = 486

 Score = 39.6 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            + D  T  +++    + P   AS TKL+T     
Sbjct: 79  VVFDPKTKKIVSSYNENTPLIAASTTKLLTTDTAM 113


>gi|300770260|ref|ZP_07080139.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762736|gb|EFK59553.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 396

 Score = 39.6 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 55/223 (24%), Gaps = 23/223 (10%)

Query: 36  TNTGHVIAEN-------------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
              G +I E                   +  AS+TK MT+  +   ++E K  L   +  
Sbjct: 73  AKKGKIIYEKSFGWANYLLKDSLNIQSQFELASVTKPMTSIAILKLVEEGKLKLDQTVND 132

Query: 83  SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                 Y              L N +                 ++               
Sbjct: 133 FFPDFPYEGITVKMLLTHRSGLPNYVY--FADGVWKDKKKGMSNMDAIRLLTEHKPGRYG 190

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMH--------YFQIKGLE 194
           K  G    +  N   +       + +D A+       D     H        Y +I    
Sbjct: 191 KPDGRFHYNNSNFMVLGAIIEKVSKQDYAVFLKENVFDPAGMKHTAAYSKAVYEKIPVKV 250

Query: 195 IKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ 237
           I   K    +       G  G K  ++      ++  A++  +
Sbjct: 251 IGHDKVWRRSVVQNFLDGPLGDKGIYSTVEDMFLLDIALREGR 293


>gi|269928638|ref|YP_003320959.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
 gi|269787995|gb|ACZ40137.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
          Length = 576

 Score = 39.6 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 29/107 (27%), Gaps = 3/107 (2%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + D  TG        D      S+ K MTA ++   + E +  L   I    +   Y   
Sbjct: 265 VADPITGMPYY---LDTHHRIGSVNKTMTATLILQLVDEGQLSLDDTIDQWFDGVTYGDQ 321

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            +     +  +      L      +  A        +    +   M 
Sbjct: 322 ITVRMLLNMTSGIGNFTLNPRWQEDFFANPERVFDPQEIVAYGIEME 368


>gi|118470558|ref|YP_890308.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
 gi|118171845|gb|ABK72741.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
          Length = 439

 Score = 39.6 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 29/84 (34%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
            V+A    D     AS+ KL     V   +KE        +TI+K+      +       
Sbjct: 163 EVVAGTNTDLSLPLASIFKLYVLLAVSDAIKEGTLSWDDKLTITKDGKALGSAGLDKLPP 222

Query: 100 STMTLDNALKLLIVKSANDIAVAI 123
                       ++ +++++A  +
Sbjct: 223 GAQITVRTAAQQMISASDNMATDL 246


>gi|315607655|ref|ZP_07882650.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella buccae ATCC 33574]
 gi|315250838|gb|EFU30832.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella buccae ATCC 33574]
          Length = 425

 Score = 39.6 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 12/36 (33%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            + D N    I          PAS  KL+TA     
Sbjct: 82  MVWDLNADSCIYARNARQLLRPASTMKLVTAITAID 117


>gi|227872354|ref|ZP_03990706.1| hypothetical protein HMPREF6123_0645 [Oribacterium sinus F0268]
 gi|227841803|gb|EEJ52081.1| hypothetical protein HMPREF6123_0645 [Oribacterium sinus F0268]
          Length = 124

 Score = 39.6 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGH---VIAENYPDHPWNPASLTKLMTAYV 64
           L+      +  +     Y+ L++ +       I+ N+P     PAS+TKLMTA V
Sbjct: 67  LAIPSDTSAQIQDMDAEYFLLVEEDGKEGDRAISFNHPYDRTYPASITKLMTALV 121


>gi|149185476|ref|ZP_01863792.1| Beta-lactamase class A [Erythrobacter sp. SD-21]
 gi|148830696|gb|EDL49131.1| Beta-lactamase class A [Erythrobacter sp. SD-21]
          Length = 339

 Score = 39.6 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 34  LDTNTGH---VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           +D +TG    V+     D  +  AS +K+  A V  + +   K  L++  
Sbjct: 76  IDLSTGQEIGVL----ADQRFPMASTSKVAIAAVYLAGVDAGKWTLSSEW 121


>gi|118467985|ref|YP_888728.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
 gi|118169272|gb|ABK70168.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
          Length = 414

 Score = 39.6 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD  +  AS TK MTA V+    ++ K  L  P
Sbjct: 91  PDTHFRIASNTKTMTAAVIMLLAQDGKLSLDDP 123


>gi|289642578|ref|ZP_06474720.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia symbiont of Datisca glomerata]
 gi|289507573|gb|EFD28530.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Frankia symbiont of Datisca glomerata]
          Length = 504

 Score = 39.6 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 17/56 (30%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           A +S              P   ++D  +G  + +        PAS  K + A    
Sbjct: 54  AAVSARLARPLANPALGNPVGLVVDALSGATLFDRGSTTAVAPASTLKTVVAAAAL 109


>gi|303251384|ref|ZP_07337561.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          pleuropneumoniae serovar 6 str. Femo]
 gi|307252571|ref|ZP_07534466.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307256999|ref|ZP_07538775.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 10 str.
          D13039]
 gi|302649738|gb|EFL79917.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          pleuropneumoniae serovar 6 str. Femo]
 gi|306859976|gb|EFM91994.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306864483|gb|EFM96390.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 10 str.
          D13039]
          Length = 480

 Score = 39.6 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           F+  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 IFIPSISFAEINTSELLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|271962984|ref|YP_003337180.1| beta-lactamase [Streptosporangium roseum DSM 43021]
 gi|270506159|gb|ACZ84437.1| beta-lactamase [Streptosporangium roseum DSM 43021]
          Length = 283

 Score = 39.6 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 63/236 (26%), Gaps = 27/236 (11%)

Query: 34  LDTNTG-HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +D +TG  V   +  D P   AS+ KL      F      +  +T  +T+  +     P+
Sbjct: 20  VDVDTGAEV--AHGADEPVVMASVFKLALLVEFFRQADAGRLDVTERVTVMADRHTPGPT 77

Query: 93  NSTFKKGS-TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             +      TM+L +   L+I  S N  A A+   +  +    +                
Sbjct: 78  GVSAMADDVTMSLRDLAYLMIAVSDNTAADALIGRVGLSAVNTMLAAEGLDGTWVEHDCR 137

Query: 152 -----FMNAHGV-----------------VQHGHYTTARDMAILSWRIKTDFPQYMHYFQ 189
                 +   G                        +T RDM  L   +  D         
Sbjct: 138 SLFASIVEDAGQEEMPTDPAVIARLRALDPARTSRSTPRDMTRLLGMVWRDEAASAASCA 197

Query: 190 IKGLEIKGKKYPNTNWAVGTFLGA-DGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                +  + +P+   A   +       KTG        +              + 
Sbjct: 198 SMRRLLGLQVWPHRLAAGFPYDDVAVSGKTGTLPTLRNEVGVVEYPDGGRYAVAVF 253


>gi|91218246|ref|ZP_01255193.1| Beta-lactamase [Psychroflexus torquis ATCC 700755]
 gi|91183609|gb|EAS70005.1| Beta-lactamase [Psychroflexus torquis ATCC 700755]
          Length = 400

 Score = 39.6 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
               +     AS+TK+MT   +    ++ + +L  P
Sbjct: 72  SINTETLIPIASMTKIMTTIAILQLYEKGEFLLDDP 107


>gi|254372601|ref|ZP_04988090.1| hypothetical protein FTCG_00165 [Francisella tularensis subsp.
          novicida GA99-3549]
 gi|151570328|gb|EDN35982.1| hypothetical protein FTCG_00165 [Francisella novicida GA99-3549]
          Length = 464

 Score = 39.6 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|265752783|ref|ZP_06088352.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 3_1_33FAA]
 gi|263235969|gb|EEZ21464.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 3_1_33FAA]
          Length = 466

 Score = 39.6 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 11/77 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKL-----------PYYTLLDTNTGHVIAENYPDH 49
          M++ L    + +  +      +++                   + D   G  +     D 
Sbjct: 1  MKRVLFFFLLILSIHSINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTAGESVYRYQDDK 60

Query: 50 PWNPASLTKLMTAYVVF 66
           + PAS+ K++T+    
Sbjct: 61 LYRPASVEKIITSVTAL 77


>gi|229082970|ref|ZP_04215391.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
 gi|228700370|gb|EEL52935.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock4-2]
          Length = 346

 Score = 39.6 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 8/125 (6%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS-- 94
               ++     D     AS+ KL+ A                 I++S+    Y  +    
Sbjct: 34  KNDEILCSINEDKRLPLASMVKLIIAIEFAKQSANGIINENEYISLSELKKYYIKNTDGG 93

Query: 95  -TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF-----VQHMNNTSKNLGLS 148
              K    M  +N +K   V   N     +  S     +       ++++N   K LGL 
Sbjct: 94  AHPKWEQDMIQNNQIKNDCVTLHNIARGMLQYSSNANTEYLINILGIENINQNIKELGLK 153

Query: 149 ATHFM 153
               +
Sbjct: 154 HHEEV 158


>gi|165976364|ref|YP_001651957.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          pleuropneumoniae serovar 3 str. JL03]
 gi|165876465|gb|ABY69513.1| penicillin-binding protein 4, D-alanyl-D-alanine carboxypeptidase
          [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 480

 Score = 39.6 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           F+  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 IFIPSISFAEINTSELLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|39933439|ref|NP_945715.1| putative class A beta-lactamase [Rhodopseudomonas palustris CGA009]
 gi|39647285|emb|CAE25806.1| putative class A beta-lactamase precursor (penicillinase)
           [Rhodopseudomonas palustris CGA009]
          Length = 291

 Score = 39.6 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 64/214 (29%), Gaps = 4/214 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LDT +G +I  +  D  +   S  K++ A +V + +  K+  L   ++ +K+       
Sbjct: 50  VLDTASGRMI-GHRLDDRFPMCSTFKVLAAGLVLARVDRKQENLDRRVSYAKSDLVTYSP 108

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +       MT+    +  I  S N  A  +  +         F + + + +  L    T
Sbjct: 109 ATEKHVEDGMTIAELCEAAITLSDNTAANLLLASFGGPAGLTAFARSLGDETTRLDRIET 168

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
               A         +       L      D        Q+               A    
Sbjct: 169 ELNEALAGDPRDTTSPRAMAQDLRALTLGDALSPASRAQLITWLKANTTGGTRLRAGVPP 228

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
               G KTG       N +A      +  LI  +
Sbjct: 229 GWTVGDKTGTGGRGTANDIAVLWPLQRAPLIVTV 262


>gi|18844710|gb|AAL78277.1| K1 beta-lactamase [Klebsiella oxytoca]
 gi|18844714|gb|AAL78279.1| K1 beta-lactamase [Klebsiella oxytoca]
 gi|60416695|emb|CAI43412.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416697|emb|CAI43413.1| beta-lactamase [Klebsiella oxytoca]
          Length = 291

 Score = 39.6 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 65/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A       
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 234 VGDKTGGGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 291


>gi|307247933|ref|ZP_07529967.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306855583|gb|EFM87752.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
          Length = 480

 Score = 39.6 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           F+  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 IFIPSISFAEINTSELLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|289207652|ref|YP_003459718.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Thioalkalivibrio sp. K90mix]
 gi|288943283|gb|ADC70982.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Thioalkalivibrio sp. K90mix]
          Length = 488

 Score = 39.6 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           G V+A    D P+NPAS  KL T+      L       T   
Sbjct: 68  GAVLARLNADTPYNPASTVKLATSLAALHELGPNYTWTTEIW 109


>gi|254374056|ref|ZP_04989538.1| hypothetical protein FTDG_00217 [Francisella novicida GA99-3548]
 gi|151571776|gb|EDN37430.1| hypothetical protein FTDG_00217 [Francisella novicida GA99-3548]
          Length = 464

 Score = 39.6 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++D+    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIIDSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|53729015|ref|ZP_00134267.2| COG2027: D-alanyl-D-alanine carboxypeptidase (penicillin-binding
          protein 4) [Actinobacillus pleuropneumoniae serovar 1
          str. 4074]
 gi|126208421|ref|YP_001053646.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          pleuropneumoniae L20]
 gi|307250189|ref|ZP_07532147.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|126097213|gb|ABN74041.1| penicillin-binding protein 4 precursor [Actinobacillus
          pleuropneumoniae serovar 5b str. L20]
 gi|306857788|gb|EFM89886.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 4 str. M62]
          Length = 480

 Score = 39.6 bits (90), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           F+  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 IFIPSISFAEINTSELLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|282896380|ref|ZP_06304401.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Raphidiopsis
          brookii D9]
 gi|281198668|gb|EFA73548.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Raphidiopsis
          brookii D9]
          Length = 431

 Score = 39.6 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 32 TLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           L+ + ++  +I        + PAS TK++T    +  
Sbjct: 5  ILIKNLSSDQIIYSRDAQKYFIPASTTKILTTAAAWQK 42


>gi|229818434|ref|ZP_04448715.1| hypothetical protein BIFANG_03741 [Bifidobacterium angulatum DSM
           20098]
 gi|229784304|gb|EEP20418.1| hypothetical protein BIFANG_03741 [Bifidobacterium angulatum DSM
           20098]
          Length = 461

 Score = 39.6 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
              G + AE   D    PAS TK +TA+     L+     L T + ++ 
Sbjct: 88  AADGTIAAERNLDTEREPASTTKTLTAFTAVHTLEM-SGTLDTEVYLTH 135


>gi|323714483|pdb|3NI9|A Chain A, Ges-2 Carbapenemase Apo Form
 gi|323714484|pdb|3NI9|B Chain B, Ges-2 Carbapenemase Apo Form
 gi|325053913|pdb|3NIA|A Chain A, Ges-2 Carbapenemase Tazobactam Complex
          Length = 269

 Score = 39.6 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 58/219 (26%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 25  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 83

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +   F     MT+  A +  +  S N     +   +          M    + +G S + 
Sbjct: 84  ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 138

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN------- 204
                  +        RD        +T                  +++   N       
Sbjct: 139 LDRKEPEMNDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 198

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 199 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 237


>gi|14276853|gb|AAK58421.1|AF326355_1 beta-lactamase GES-2 [Pseudomonas aeruginosa]
 gi|19919177|gb|AAM08182.1|AF347074_2 expanded-spectrum beta-lactamase GES-2 [Pseudomonas aeruginosa]
          Length = 287

 Score = 39.6 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 58/219 (26%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +   F     MT+  A +  +  S N     +   +          M    + +G S + 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN------- 204
                  +        RD        +T                  +++   N       
Sbjct: 157 LDRKEPEMNDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|323704892|ref|ZP_08116469.1| beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535818|gb|EGB25592.1| beta-lactamase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 259

 Score = 39.6 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 72/218 (33%), Gaps = 11/218 (5%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + +  TG +I     +  +  AS  K++    ++   KE    LT  I +S         
Sbjct: 22  VKNLKTGEMI-GVNEEMMFPSASTIKILIMAQIYKMAKEGYIRLTDNIVLSDFMKTAGSG 80

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                          L  L++  +++ A  +   +       ++++N  +++LGL  T  
Sbjct: 81  VLYQLNSKHKFTIEELITLMIIISDNTAANVLIDIAD-----MKNINKMAEDLGLFHTKI 135

Query: 153 MNAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                  +       +YT  +DM  L  ++ +       Y       +K ++        
Sbjct: 136 QRKMMDFEAIKSGKDNYTCPKDMTRLLEQMYSGKVVDEEYSIKMIEILKKQQDLGRLDMY 195

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILG 245
                    K G   +   ++    ++    +I+V+  
Sbjct: 196 LPDDVLIAHKPGELKSLEHDVGIVFLKDCDYIISVMTN 233


>gi|56696278|ref|YP_166635.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
 gi|56678015|gb|AAV94681.1| beta-lactamase, putative [Ruegeria pomeroyi DSS-3]
          Length = 707

 Score = 39.6 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D  +   S +K+MTA +V   ++E K  L   
Sbjct: 59 ADDRFEVGSQSKMMTAVLVLQLVQEGKVALDDK 91


>gi|21232469|ref|NP_638386.1| beta lactamase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66767447|ref|YP_242209.1| beta lactamase [Xanthomonas campestris pv. campestris str. 8004]
 gi|21114253|gb|AAM42310.1| beta lactamase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572779|gb|AAY48189.1| beta lactamase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 296

 Score = 39.6 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 5/208 (2%)

Query: 33  LLDTNTG-HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           LLD+ +G  +      +  +   S  K + A  V   + + +  LT  I I  +      
Sbjct: 55  LLDSGSGWRI--GQRENERFPMCSTFKFVLAAAVLQRVDKGELRLTQQIKIRASDMLEHA 112

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSA 149
             +    G ++++    +  ++ S N  A  +           +F++ + +T        
Sbjct: 113 PVTERHVGGSLSVAELCQATMIHSDNPAANLLFPLIGDPPGLTRFLRGIGDTKTRSDRLE 172

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                          T A   A L   +  D  Q     Q+    I  +   +   A   
Sbjct: 173 PAMNGFAPGEPRDTTTPAAMAATLRTLLLGDALQPASRKQLTAWMIDNRTGDDCLRAGLP 232

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G KTG       N +A      +
Sbjct: 233 RDWKIGDKTGSNGTDTRNDIAIIWPPGR 260


>gi|89099759|ref|ZP_01172632.1| beta-lactamase [Bacillus sp. NRRL B-14911]
 gi|89085506|gb|EAR64634.1| beta-lactamase [Bacillus sp. NRRL B-14911]
          Length = 271

 Score = 39.6 bits (90), Expect = 0.69,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 72/221 (32%), Gaps = 12/221 (5%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGSTMTL 104
                +  ASL K+      F   +E    L+  + I     +       +    +++++
Sbjct: 41  NSGRKYPAASLIKIPIMMEAFFQAEEGVLDLSEQVCIGGIEKAGGAGIIQSLSVTASLSI 100

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ---- 160
            + + L+I+ S N  A  + + L        +++N+    LGL  T         +    
Sbjct: 101 LDCITLMIIVSDNTAANLLIKLL------GKKNINDRMHGLGLQTTVLGRKMMDFEAAAK 154

Query: 161 -HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
              ++TTA DM      IK                ++ +++     A+         KTG
Sbjct: 155 GIDNFTTAADMVKCLRAIKDGELFSEKNRSKMLDIMEAQQFREKLPALACKELKIANKTG 214

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLL 260
                  +    A   D    AV++  L        +  L+
Sbjct: 215 ELPGIEHDCAIFASGRDVLYAAVLIEGLSSPEEGNHAIRLI 255


>gi|228992253|ref|ZP_04152186.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
 gi|228998307|ref|ZP_04157902.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|229005790|ref|ZP_04163488.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228755466|gb|EEM04813.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock1-4]
 gi|228761459|gb|EEM10410.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides Rock3-17]
 gi|228767506|gb|EEM16136.1| D-alanyl-D-alanine carboxypeptidase [Bacillus pseudomycoides DSM
           12442]
          Length = 369

 Score = 39.6 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 44/172 (25%), Gaps = 4/172 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    PD     AS  KL+ A      + + +    +   +S +    
Sbjct: 51  SALLI-KRNDKVVYSVNPDVVLPVASTMKLIVALEFTKQVVDGRIDPNS--YVSIDDVNR 107

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
               +T            +K   +         +A+ + K               L    
Sbjct: 108 YYIPNTDGGAQDRWQKYLMKTGKMDGNAISLEEVAKGMMKFSSNANTEYLMDRLGLDYIN 167

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            +  N   +  H           +   +  +        + K  E+  ++Y 
Sbjct: 168 QNLQNL-SLPSHQPLFPIVSSLYIPGYLHKELHIPKSKLEKKLKEMSSEEYR 218


>gi|90018740|gb|ABD84038.1| beta-lactamase A [Yersinia intermedia]
          Length = 284

 Score = 39.6 bits (90), Expect = 0.70,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 8/213 (3%)

Query: 37  NTG---HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           NTG    ++        +   S  K M A  V    + +  +L   I   ++        
Sbjct: 46  NTGNGTKILY-RGA-RRFPFCSTFKFMLAAAVLGQSQSQPNLLNKHINYHESDLLSYAPI 103

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +       MT+       I  S N  A  + +         +F + + +    L      
Sbjct: 104 TRKNLAHGMTVSELCAATIQYSDNTAANLLLKELGGLAAVNQFARSIGDQMFRLDRWEPD 163

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A ++  +  D        Q+            T  A     
Sbjct: 164 LNTALPNDPRDTTTPAAMAASINKLVLGDALHPAQRSQLTAWLKGNTTGDATIRAGAPTD 223

Query: 212 GADGMKTGF-TCASGFNIVASAIQGDQSLIAVI 243
              G KTG     +  +I          ++ V+
Sbjct: 224 WIVGDKTGSGDYGTTNDIAVLWPTKGAPIVLVV 256


>gi|296395122|ref|YP_003660006.1| beta-lactamase [Segniliparus rotundus DSM 44985]
 gi|296182269|gb|ADG99175.1| beta-lactamase [Segniliparus rotundus DSM 44985]
          Length = 278

 Score = 39.6 bits (90), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 8/71 (11%)

Query: 9  AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              L + +P   +A T   P   +     G V      +  +  AS+TK+++ Y     
Sbjct: 3  TALSLLDAWPVDHVAATVIAPSGVV--AEHGEV------ERVFPLASVTKILSGYAALLA 54

Query: 69 LKEKKAMLTTP 79
          ++E    L  P
Sbjct: 55 VQEGALGLDDP 65


>gi|319653092|ref|ZP_08007194.1| penicillin-binding protein [Bacillus sp. 2_A_57_CT2]
 gi|317395013|gb|EFV75749.1| penicillin-binding protein [Bacillus sp. 2_A_57_CT2]
          Length = 494

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 29/96 (30%)

Query: 1  MRQ-------FLVIIAMAMLSNIFPFLSIAETNKLPYYTLL------------------- 34
          M++        L++  +A++    P     +  +     +                    
Sbjct: 1  MKKSVKINISLLLVFMLALVPFAQPESPQVQATEEGSELVQQLNQMLNNDPILQGGLAGV 60

Query: 35 ---DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
             +  TG ++ ++  D    PAS  KL+TA     
Sbjct: 61 SIRNAETGELVYDHIGDIRLRPASNMKLLTAAAALE 96


>gi|52850982|emb|CAH57527.1| penicillin-binding protein 1b [Streptococcus pneumoniae]
          Length = 443

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 40/145 (27%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 116 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 175

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +      ++        K +++ M
Sbjct: 176 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYSLLRENGVDVKGYMEKM 233

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 234 GYEIPEYGIESLPMGGGIEVTVAQH 258


>gi|78061533|ref|YP_371441.1| Beta-lactamase [Burkholderia sp. 383]
 gi|77969418|gb|ABB10797.1| Beta-lactamase [Burkholderia sp. 383]
          Length = 530

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           + + NTG   AE   D      S+TK+MT++++  +++  +  L  P
Sbjct: 90  IANLNTG---AEMTVDTRLQIGSVTKVMTSHLLMRYVEAGRIGLDDP 133


>gi|60416713|emb|CAI43421.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416715|emb|CAI43422.1| beta-lactamase [Klebsiella oxytoca]
          Length = 291

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 291


>gi|317401229|gb|EFV81873.1| beta-lactamase class A-like protein [Achromobacter xylosoxidans
          C54]
          Length = 287

 Score = 39.6 bits (90), Expect = 0.72,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 35 DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          D + G V+  ++ D     AS+ K+     +   +   +  L  P
Sbjct: 39 DLDGGTVL-AHHADRVQPSASIIKVPILLALLEAVANGRYALEQP 82


>gi|226312677|ref|YP_002772571.1| D-alanyl-D-alanine carboxypeptidase precursor [Brevibacillus brevis
           NBRC 100599]
 gi|226095625|dbj|BAH44067.1| putative D-alanyl-D-alanine carboxypeptidase precursor
           [Brevibacillus brevis NBRC 100599]
          Length = 964

 Score = 39.6 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLL---DTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFS 67
           + + I P L   E   +    L+   D  TG  V+ E   D    PAS  KL+T     +
Sbjct: 506 LSAMIDPILDTPEAAGVTAGILIKSLD-TTGDPVLYERDADTLLTPASNLKLLTTATALN 564

Query: 68  F 68
            
Sbjct: 565 Q 565


>gi|219920897|emb|CAQ76626.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 39.6 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    +L   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESHPDVLNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|60416721|emb|CAI43425.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416723|emb|CAI43426.1| beta-lactamase [Klebsiella oxytoca]
 gi|60416725|emb|CAI43427.1| beta-lactamase [Klebsiella oxytoca]
          Length = 291

 Score = 39.6 bits (90), Expect = 0.73,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 291


>gi|323191482|gb|EFZ76744.1| penicillin-binding protein ampH [Escherichia coli RN587/1]
          Length = 385

 Score = 39.6 bits (90), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 32/111 (28%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY----------------------TLLDTNT 38
           M++ L+  A+   +++    +     +  +                        ++D N 
Sbjct: 1   MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFYGSGATGMALVVIDGNQ 60

Query: 39  ------GHVIAENYP----DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                 G     N      D     ASLTKLMT+ ++   L +    L  P
Sbjct: 61  RVFRSYGETRPGNNVRPQLDSVIRIASLTKLMTSEILVKLLDQGTVKLNDP 111


>gi|15805460|ref|NP_294156.1| beta-lactamase [Deinococcus radiodurans R1]
 gi|6458117|gb|AAF10013.1|AE001903_1 beta-lactamase, putative [Deinococcus radiodurans R1]
          Length = 277

 Score = 39.6 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 11/45 (24%), Gaps = 1/45 (2%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           + D   G  +     D  +  AS  K+                L
Sbjct: 21 LVTDFA-GRELYAQAADAVFPAASTIKVPLLLFALEQAGRGDLDL 64


>gi|307307760|ref|ZP_07587489.1| putative beta-lactamase precursor protein [Sinorhizobium meliloti
           BL225C]
 gi|307317420|ref|ZP_07596860.1| putative beta-lactamase precursor protein [Sinorhizobium meliloti
           AK83]
 gi|306897009|gb|EFN27755.1| putative beta-lactamase precursor protein [Sinorhizobium meliloti
           AK83]
 gi|306901626|gb|EFN32228.1| putative beta-lactamase precursor protein [Sinorhizobium meliloti
           BL225C]
          Length = 287

 Score = 39.6 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 5/120 (4%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + +  TG  I E   D     AS  K          + E +  L  P  I+  A     
Sbjct: 28  VVRNLKTGETI-ERGADEETPSASTRKTSIMMAALKAVHEGRLDLDEP--ITYEARFAEE 84

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S   +  T  +  +L+  I            + + +     ++ +++  K++G+  TH
Sbjct: 85  VASGMFRYLTPGIVISLRDAITGMMVLSDNVCTKMVFERL--TLEEVDSYCKSIGMHGTH 142


>gi|146277642|ref|YP_001167801.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555883|gb|ABP70496.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 648

 Score = 39.6 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 27/146 (18%), Gaps = 37/146 (25%)

Query: 27  KLPYYTLLDTNTGHVIA------------------------ENYPDHPW---------NP 53
           +      +D  TG ++A                              P           P
Sbjct: 266 ESAAAVAIDVTTGDILAICSSPSFDPNLFVRGISYKDYSALTENDHRPLANKAVQGAYPP 325

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S  K++TA               T +       E         K     + +  + L  
Sbjct: 326 GSTFKMVTALAALEA---GVINADTSVYC-PGHYETGGRRFHCWKRGGHGMVSLSRSLSE 381

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMN 139
                              +  + + 
Sbjct: 382 SCDVYYYDIAQRVGIDKIAEMGRRLG 407


>gi|221046604|pdb|3BYD|A Chain A, Crystal Structure Of Beta-Lactamase Oxy-1-1 From
           Klebsiella Oxytoca
          Length = 267

 Score = 39.6 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 32  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 89

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 90  KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 149

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 150 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 209

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 210 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 267


>gi|83949981|ref|ZP_00958714.1| penicillin-binding protein 2 [Roseovarius nubinhibens ISM]
 gi|83837880|gb|EAP77176.1| penicillin-binding protein 2 [Roseovarius nubinhibens ISM]
          Length = 646

 Score = 39.6 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 33/154 (21%), Gaps = 37/154 (24%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAE------------------------NYPDH 49
           SN+  ++     N+     ++D  TG ++A                              
Sbjct: 252 SNLQAYIKDRLHNESAAAVVIDVQTGDILASGSTPAFDPNLFVRGISVADYKALLENKYR 311

Query: 50  PW---------NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS 100
           P           P S  K++TA          +      +       E         K  
Sbjct: 312 PLPNKAVQGVYPPGSTFKMVTALAALES---GQMTPNDTVYC-PGHLEVSSRRFHCWKRV 367

Query: 101 TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                +  + L              +  +   + 
Sbjct: 368 GHGNVDLNRSLRESCDVYYYEMALRTGIEKISEM 401


>gi|67921481|ref|ZP_00514999.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Crocosphaera
           watsonii WH 8501]
 gi|67856593|gb|EAM51834.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Crocosphaera
           watsonii WH 8501]
          Length = 309

 Score = 39.6 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 32  TLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
            L++    G ++  +  D  + PAS TK+ T      
Sbjct: 97  VLVEKLEDGTLLYTHNADRHFIPASNTKIFTTAAALQ 133


>gi|72382536|ref|YP_291891.1| putative beta-lactamase [Prochlorococcus marinus str. NATL2A]
 gi|72002386|gb|AAZ58188.1| putative beta-lactamase [Prochlorococcus marinus str. NATL2A]
          Length = 357

 Score = 39.6 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 57/145 (39%), Gaps = 5/145 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
               +  +   V AE   D   + AS  K+    ++   L++K+ +    + +S++    
Sbjct: 97  SAFFISLD-DQVYAEIKSDIKLSAASSIKVPILIILLRMLEKKEIIWNEKLILSEDVIGG 155

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                 +++   +     +   +++ +++ A  +           ++ +N   K +GL+ 
Sbjct: 156 GSGWMAYQEIGEIFPVYEVASEMIRVSDNTATNLL----IKRLGGIKIVNQKFKEIGLNN 211

Query: 150 THFMNAHGVVQHGHYTTARDMAILS 174
           T   N    +   + T+ +D+++  
Sbjct: 212 TQINNYLPDLDGTNLTSTKDLSLAM 236


>gi|308177249|ref|YP_003916655.1| hypothetical protein AARI_14650 [Arthrobacter arilaitensis Re117]
 gi|307744712|emb|CBT75684.1| conserved hypothetical protein [Arthrobacter arilaitensis Re117]
          Length = 270

 Score = 39.6 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 32 TLLDTNTGHVIAENYPDHP--WNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++D  +G +I + + D    +  AS+TKL++AY     L+E+   L  P
Sbjct: 18 VVVDV-SGQII-DQHGDTQHAFPLASVTKLLSAYAFLVALEEEAISLDEP 65


>gi|241992520|gb|ACS73598.1| beta-lactamase GES10 [uncultured bacterium]
          Length = 287

 Score = 39.6 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRTAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +    N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLCDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|162455769|ref|YP_001618136.1| pencillin-binding transpeptidase [Sorangium cellulosum 'So ce 56']
 gi|161166351|emb|CAN97656.1| pencillin-binding transpeptidase with putative regulatory
           N-terminal domain [Sorangium cellulosum 'So ce 56']
          Length = 726

 Score = 39.6 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 6/60 (10%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNP---ASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
                +LD  TG V+A + P     P    S  K +T              +T      K
Sbjct: 432 AATAIVLDPRTGEVLAIHDPSTAAAPRVSGSTIKSLTIAAALDE---GAIAVTDRFFCDK 488


>gi|74474884|dbj|BAE44430.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 289

 Score = 39.6 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 61/203 (30%), Gaps = 3/203 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  I  +  D  +   S  K + A  V S  + + A+L T + +          
Sbjct: 51  LLDTASGRRI-GHRQDERFPMCSTFKSVLAATVLSQAERRPALLDTRVPVRDADLLSHAP 109

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIA--ESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +    G  MT+ +  +  I+ S N  A  +            F++   +          
Sbjct: 110 VTRRHAGKDMTVRDLCRATIITSDNTAANLLFGVVGGPPAVTAFLRASGDAVSRSDRLEP 169

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +          T A   A L   +  +  Q     Q+    I  +       A    
Sbjct: 170 ELNSFAKGDPRDTTTPAAMAATLQRVVLGEVLQLASRQQLADWLIDNETGDACLRAGLGK 229

Query: 211 LGADGMKTGFTCASGFNIVASAI 233
               G KTG       N +A   
Sbjct: 230 RWRVGDKTGSNGEDARNDIAVLW 252


>gi|306828568|ref|ZP_07461763.1| penicillin-binding protein 1B [Streptococcus mitis ATCC 6249]
 gi|304429367|gb|EFM32452.1| penicillin-binding protein 1B [Streptococcus mitis ATCC 6249]
          Length = 831

 Score = 39.2 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 427 VLMDNQTGAILGFVGGRNYQENQNNHAIDTKRSPASTTKPILAYGIAIDQGLMGSASILS 486

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               + +        ++         +       + +                K +++ M
Sbjct: 487 NYPTNFSNGNPIMYVNSPGTAMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 544

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 545 GYEIPEYGIESLPMGGGIEVTVAQH 569


>gi|322514697|ref|ZP_08067724.1| D-alanyl-D-alanine carboxypeptidase DacB [Actinobacillus ureae
          ATCC 25976]
 gi|322119346|gb|EFX91459.1| D-alanyl-D-alanine carboxypeptidase DacB [Actinobacillus ureae
          ATCC 25976]
          Length = 196

 Score = 39.2 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 24 ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
                 +   + +T  +IA+   D    PAS  K+ TA   
Sbjct: 38 PAGSSATFIAKNLDTNQIIAQYQSDTFMLPASTQKVFTALAA 79


>gi|317506500|ref|ZP_07964300.1| tat pathway signal sequence [Segniliparus rugosus ATCC BAA-974]
 gi|316255210|gb|EFV14480.1| tat pathway signal sequence [Segniliparus rugosus ATCC BAA-974]
          Length = 297

 Score = 39.2 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 4/123 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT----TPITISKN 85
            Y L D  TG      +       AS  KL+ A  +    +  +  LT      +    N
Sbjct: 74  SYVLRDRKTGATYHSQHASELIYTASTIKLLIATDLLVRQRAGQLTLTGPDKDLMHQMLN 133

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
            S+   +NS + K +       L++       D     + S         +   +    L
Sbjct: 134 FSDNDAANSLWDKYNGPGGTTLLRVFQSYGFIDEINQHSPSASSMYWGNHKATADDLGRL 193

Query: 146 GLS 148
            L 
Sbjct: 194 MLY 196


>gi|307945692|ref|ZP_07661028.1| beta-lactamase [Roseibium sp. TrichSKD4]
 gi|307771565|gb|EFO30790.1| beta-lactamase [Roseibium sp. TrichSKD4]
          Length = 299

 Score = 39.2 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 54/208 (25%), Gaps = 9/208 (4%)

Query: 35  DTNTGHVIAEN---YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           D  TG           D  +   S  K M        ++         I I +       
Sbjct: 58  DLETG----SKTGWRADERFAMNSTFKFMLVAATLKRIENGDEQFDRSIDIDEADLVPWT 113

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN-TSKNLGLSAT 150
             +    G TMT+      ++ KS N     + +++    K      +     ++     
Sbjct: 114 PVTEKHIGQTMTIHELCSAVMTKSDNLATNYLLKAMGGPAKLTALLRDAGDDVSISSRYE 173

Query: 151 HFMNAHGVVQHGHYTTARDM-AILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
              NA G       +T   M + L   +           Q+    ++             
Sbjct: 174 PEANAVGQNDDRDTSTPNAMVSNLERFVLGSTLSKASRAQLFDWMVENTTGLKRIRGGLP 233

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ 237
                G +TG       + +A A    +
Sbjct: 234 DDWNAGDRTGTGSGGRASNIAIAYPPGR 261


>gi|220911087|ref|YP_002486396.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Arthrobacter chlorophenolicus A6]
 gi|219857965|gb|ACL38307.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Arthrobacter chlorophenolicus A6]
          Length = 509

 Score = 39.2 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            + D  TG V+ +        PAS  KL+T+      L  + 
Sbjct: 119 IVQDALTGQVLFDRGGADGRVPASNMKLLTSVAALRALGPEH 160


>gi|254183414|ref|ZP_04890006.1| class A beta-lactamase [Burkholderia pseudomallei 1655]
 gi|184213947|gb|EDU10990.1| class A beta-lactamase [Burkholderia pseudomallei 1655]
          Length = 314

 Score = 39.2 bits (89), Expect = 0.82,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 30  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 88

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 89  ERFPFCSTFKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 148

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 149 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 208

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 209 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 268

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 269 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 300


>gi|14578581|gb|AAK52328.1| class A beta-lactamase precursor [Burkholderia pseudomallei]
          Length = 295

 Score = 39.2 bits (89), Expect = 0.82,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFCSTFKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|329895273|ref|ZP_08270915.1| Cell division protein FtsI (Peptidoglycan synthetase) [gamma
           proteobacterium IMCC3088]
 gi|328922395|gb|EGG29738.1| Cell division protein FtsI (Peptidoglycan synthetase) [gamma
           proteobacterium IMCC3088]
          Length = 581

 Score = 39.2 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 26/101 (25%), Gaps = 25/101 (24%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNP 53
            +   ++ +E         +D++TG ++A        P+                  + P
Sbjct: 236 ALQSVVAKSEAMGA-SAITIDSHTGEILAVSNYPSFNPNDRSTFSASAARNRVFVDQYEP 294

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
            S  K +TA          +    T    S           
Sbjct: 295 GSTLKALTAVAALE---TGRYSADTVFNTSPGWMVVQGKTF 332


>gi|302654566|ref|XP_003019087.1| hypothetical protein TRV_06912 [Trichophyton verrucosum HKI 0517]
 gi|291182784|gb|EFE38442.1| hypothetical protein TRV_06912 [Trichophyton verrucosum HKI 0517]
          Length = 2960

 Score = 39.2 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 48   DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            D  +  AS+TKLMTA  V   ++  +  L  
Sbjct: 2621 DSVYWMASMTKLMTAIAVMLCVERGQISLDE 2651


>gi|226357104|ref|YP_002786844.1| beta-lactamase [Deinococcus deserti VCD115]
 gi|226319094|gb|ACO47090.1| putative beta-lactamase (penicillinase) [Deinococcus deserti
          VCD115]
          Length = 280

 Score = 39.2 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 12/45 (26%), Gaps = 1/45 (2%)

Query: 35 DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          D + G  +        +  AS  K+          +  +  L   
Sbjct: 24 DLD-GTELYALNATRTFPAASTIKVPLLIQALQEAQTGRLNLRER 67


>gi|229097055|ref|ZP_04228022.1| Beta-lactamase [Bacillus cereus Rock3-29]
 gi|229116017|ref|ZP_04245411.1| Beta-lactamase [Bacillus cereus Rock1-3]
 gi|228667412|gb|EEL22860.1| Beta-lactamase [Bacillus cereus Rock1-3]
 gi|228686341|gb|EEL40252.1| Beta-lactamase [Bacillus cereus Rock3-29]
          Length = 312

 Score = 39.2 bits (89), Expect = 0.84,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 58/225 (25%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   I+  + +  +  AS  K + A V+          L   I  +K         
Sbjct: 75  IDTGTNQTISYRH-NERFAFASTYKALAAGVLLQQNSID--TLNEVIKFTKEDLVDYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAV--AIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M L    +  +  S N             K  +K ++ + +         T 
Sbjct: 132 TEKHVDTGMKLGEIAEAAVRSSDNTAGNILFHKIGGPKGYEKALRQIGDRVTMSDRFETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T     + L      +         +               A     
Sbjct: 192 LNEAIPGDIRDTSTAKAIASNLKAFTVGNALPAEKRKILTEWMKGNATGDKLIRAGVPTD 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G K+G       N +A     ++  +I  IL + D       
Sbjct: 252 WIVGDKSGAGSYGTRNDIAIVWPPNRAPIIIAILSSKDEKEATYD 296


>gi|94495536|ref|ZP_01302116.1| hypothetical beta-lactamase precursor (penicillin-binding protein)
           [Sphingomonas sp. SKA58]
 gi|94424924|gb|EAT09945.1| hypothetical beta-lactamase precursor (penicillin-binding protein)
           [Sphingomonas sp. SKA58]
          Length = 498

 Score = 39.2 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 42/130 (32%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLL------------DTNTGHVIAE---- 44
           M+ +LV++ +       P L+ A+ ++     ++            D+++  +I      
Sbjct: 1   MKFWLVLLLLCF-----PALAHAQADEKKIAAVVPDIDRLFHDFRQDSHSPGLIYGIVAN 55

Query: 45  -----------NYPDHPWN--------PASLTKLMTAYVVFSFLKEKKAMLTT--PITIS 83
                         D             AS+TK  TA  +    ++ K  L       + 
Sbjct: 56  GRLVHVKAFGVQDLDQKRPVTPDSLFRIASMTKAFTALSILKLREDGKLSLDDLAEQHVP 115

Query: 84  KNASEYPPSN 93
           +      P+ 
Sbjct: 116 ELRQWTYPTK 125


>gi|94984255|ref|YP_603619.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Deinococcus
           geothermalis DSM 11300]
 gi|94554536|gb|ABF44450.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Deinococcus
           geothermalis DSM 11300]
          Length = 473

 Score = 39.2 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            + D  TG ++     D P  PAS  KL+TA  V 
Sbjct: 66  LVRDLTTGELLEAREADLPLIPASNMKLVTAASVL 100


>gi|332881568|ref|ZP_08449217.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680566|gb|EGJ53514.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 404

 Score = 39.2 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D     ++          PAS  KL+TA    S 
Sbjct: 66  VYDLTDDTLLYAYQAKQRMRPASTEKLVTAVAALSE 101


>gi|297191072|ref|ZP_06908470.1| beta-lactamase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150751|gb|EFH30768.1| beta-lactamase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 331

 Score = 39.2 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 69/264 (26%), Gaps = 23/264 (8%)

Query: 14  SNIFPFLSIAETNKLPY-----------------YTLLDTNTGHVIAENYPDHPWNPASL 56
           ++  P  S A                           +DT +G  +    PD  +   S 
Sbjct: 35  ASTSPGASAAPKVSAAASGRAFARLQREFDARLGVYAVDTGSGRTVTHR-PDERFAYCST 93

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K +TA  V        A L   +  +++        +     S MTL       +  S 
Sbjct: 94  HKALTAAAVLEHNS--LAGLDKVVRYTRDDLVAHSPVTEKHVDSGMTLRAVCDAAVRYSD 151

Query: 117 NDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           N  A  + +     K  +  +  + +T+ +     T    A         T       L 
Sbjct: 152 NTAANLLFDELGGPKAFQAVLAALGDTTTHADRLETALNAATPGDIRDTSTPRALAHDLR 211

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
                D         +               A        G +TG       N +A A  
Sbjct: 212 AYALGDVLDAEKKALLTHWLKGNTTGDALIRAGVPDTWQVGDRTGAGAYGTRNAIAVAWP 271

Query: 235 GD-QSLIAVILGALDRNTRNKVSA 257
                ++  +L +   N+    +A
Sbjct: 272 PGAAPVVIAVLSSRAENSPIAKAA 295


>gi|254480182|ref|ZP_05093430.1| Penicillin-binding Protein dimerisation domain family [marine gamma
           proteobacterium HTCC2148]
 gi|214039744|gb|EEB80403.1| Penicillin-binding Protein dimerisation domain family [marine gamma
           proteobacterium HTCC2148]
          Length = 580

 Score = 39.2 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 19/81 (23%), Gaps = 21/81 (25%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAE-----NYPDHP----------------WNPASLTK 58
              A   +      LD  TG ++A        P+                  + P S  K
Sbjct: 244 AVTAANAESGSVVTLDAQTGEILAMVNYPVYNPNSRKNMKAANMRNRAITDTYEPGSTMK 303

Query: 59  LMTAYVVFSFLKEKKAMLTTP 79
            MT        +     +   
Sbjct: 304 TMTLVAALESGRYTTTTMIDT 324


>gi|119487906|ref|ZP_01621403.1| hypothetical protein L8106_28621 [Lyngbya sp. PCC 8106]
 gi|119455482|gb|EAW36620.1| hypothetical protein L8106_28621 [Lyngbya sp. PCC 8106]
          Length = 436

 Score = 39.2 bits (89), Expect = 0.88,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 69/211 (32%), Gaps = 12/211 (5%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
              D P +PASL K+  A  +   + ++   L   + +  +   +    S+ +  ++ +L
Sbjct: 211 RGEDPPASPASLIKVPIAVALLEKISKENISLEEQVYV--DGGNFTEDASSIRARTSYSL 268

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTE------KKFVQHMNNTSKNLGLSATHFMNAHGV 158
           +  +  +I  S+N     + + L +        K+  +      K +G          G 
Sbjct: 269 NQLMGEMIDHSSNIATNQLIDYLGQDYINQTLEKQGYKETKVKFKLMGDRIMPKRPGSG- 327

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT 218
               +  T+ ++  +  +                     ++               G KT
Sbjct: 328 ---KNRLTSSELTEMMIKTYNHEYPNADALIQALNRQYDREIGYQALEDLVDAQWLGEKT 384

Query: 219 GFTCASGFNIVASAIQGDQSLIAVILGALDR 249
           G         +A +I G+Q +I VI     +
Sbjct: 385 GQNSRMIGTTLAVSIDGEQYVITVIDNNTGK 415


>gi|145542863|ref|XP_001457118.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424933|emb|CAK89721.1| unnamed protein product [Paramecium tetraurelia]
          Length = 351

 Score = 39.2 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 61/223 (27%), Gaps = 15/223 (6%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                +       LTKLM  Y +    ++ K  L  P             NS        
Sbjct: 119 YGVNENIKCEVGCLTKLMAIYTILQLCQDYKIRLQVPYYAESVPEPKADLNSYNYFTLEQ 178

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEK------KFVQHMNNTSKNLGLSATHFMNAH 156
            L   +      +   I   ++E L    +      KF+   N  ++ L ++ T + N  
Sbjct: 179 LLYALILRGGNDALWSIVSGLSEKLYGITQRNLIKNKFLDLYNRNAQQLKMNNTRYTNLE 238

Query: 157 GVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK--------GKKYPNTNWAVG 208
           G+    + TTA +   L       F  +    + K    +           Y   N    
Sbjct: 239 GLADPNNVTTA-NDLCLLCDQLLKFDIFKRILKTKSYTCRATFENGDLSTVYTWKNRQFQ 297

Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
               +     G    SG   +         +  ++L    +  
Sbjct: 298 FMKKSFYGFQGINNNSGPCALLLPEADTNQMFVILLKCNPKQE 340


>gi|300774221|ref|ZP_07084088.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300758900|gb|EFK55729.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 416

 Score = 39.2 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 10/123 (8%)

Query: 46  YPDHPWNPASLTKLMTAYVVFS---FLKEKKAMLTTPITI-SKNASEYPPSNSTFKKGST 101
            P   + PAS  KL TA +       L  K     TP+ I S    +      +  +   
Sbjct: 74  NPHWYFYPASTVKLPTAILALEKINELNIKGLTKDTPLKIDSAFEKQTLVDRDSSSESGL 133

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
            ++   ++ +++ S ND    + E +        + +N   K  G   +  +N   +   
Sbjct: 134 PSVGQYVRKILLTSDNDAQNRLFEFI------GREELNKKLKKYGTRNSRIVNRLAIGDK 187

Query: 162 GHY 164
           G +
Sbjct: 188 GIW 190


>gi|311826245|emb|CBX55902.1| putative CTX-M-15 extended spectrum beta-lactamase [Escherichia
          coli]
          Length = 98

 Score = 39.2 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 17/94 (18%)

Query: 1  MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
          +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6  LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S +K+M A  V    + +  +L   
Sbjct: 64 RADERFAMCSTSKVMAAAAVLEKSESEPNLLNQR 97


>gi|90018742|gb|ABD84039.1| beta-lactamase A [Yersinia intermedia]
          Length = 273

 Score = 39.2 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 58/213 (27%), Gaps = 8/213 (3%)

Query: 37  NTG---HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           NTG    ++        +   S  K M A  V    + +  +L   I   ++        
Sbjct: 36  NTGNCTKILY-RGA-RRFPFCSTFKFMLAAAVLGQSQSQPNLLNKHINYHESDLLSYAPI 93

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC--KTEKKFVQHMNNTSKNLGLSATH 151
           +       MT+       I  S N  A  + + L       +F + + +    L      
Sbjct: 94  TRKNLAHGMTVSELCAATIQYSDNTAANLLLKELGGLAAVNQFARSIGDQMFRLDRWEPD 153

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A ++  +  D        Q+            T  A     
Sbjct: 154 LNTALPNDPRDTTTPAAMAASINKLVLGDALHPAQRSQLTAWLKGNTTGDATIRAGAPTD 213

Query: 212 GADGMKTGF-TCASGFNIVASAIQGDQSLIAVI 243
              G KTG     +  +I          ++ V+
Sbjct: 214 WIVGDKTGSGDYGTTNDIAVLWPTKGAPIVLVV 246


>gi|150389837|ref|YP_001319886.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
 gi|149949699|gb|ABR48227.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
          Length = 540

 Score = 39.2 bits (89), Expect = 0.90,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 72/247 (29%), Gaps = 3/247 (1%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
              H    AS+ KL+     F  ++EKK  L   +TI K         +  ++ +   +D
Sbjct: 34  NDTHKMPSASIIKLLIMIEAFCQVEEKKFQLNQSLTIPKQDQIPHSMTTDLEENTFQFVD 93

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
               ++ V       V I     +   +  + +      L      F  A       + T
Sbjct: 94  LVQLMITVSDNTATNVLIDLLGFENINQRAEKLGLKETVLSRKMLDFKAAKE--GRQNLT 151

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASG 225
              D   +   I T+        +     +  ++                 KTG      
Sbjct: 152 HGEDAIRMMELIVTEQAASPPMCRRMMDILFNQQDREMLRRFIPKKVKVAHKTGDLPNLN 211

Query: 226 FNIVASAIQGDQSLIAV-ILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQN 284
            ++    +     LI V + GA D      +   +  + +   +++     ++K      
Sbjct: 212 HDVGWVLLSDMSYLIGVFVNGAADNLEAKTIIGKISKLAYDYFSNQSPALALVKSTTAPI 271

Query: 285 LSNEVPN 291
                P+
Sbjct: 272 QLKPAPD 278


>gi|326778115|ref|ZP_08237380.1| beta-lactamase [Streptomyces cf. griseus XylebKG-1]
 gi|326658448|gb|EGE43294.1| beta-lactamase [Streptomyces cf. griseus XylebKG-1]
          Length = 458

 Score = 39.2 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK  TA +V     E    L  P
Sbjct: 57 DADTQYRIGSITKTFTAVLVLRLRDEGLIDLDDP 90


>gi|182437460|ref|YP_001825179.1| putative beta-lactamase [Streptomyces griseus subsp. griseus NBRC
          13350]
 gi|178465976|dbj|BAG20496.1| putative beta-lactamase [Streptomyces griseus subsp. griseus NBRC
          13350]
          Length = 458

 Score = 39.2 bits (89), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK  TA +V     E    L  P
Sbjct: 57 DADTQYRIGSITKTFTAVLVLRLRDEGLIDLDDP 90


>gi|303252988|ref|ZP_07339143.1| truncated D-alanyl-D-alanine carboxypeptidase/endopeptidase
          [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302648179|gb|EFL78380.1| truncated D-alanyl-D-alanine carboxypeptidase/endopeptidase
          [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 184

 Score = 39.2 bits (89), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
           F+  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 IFIPSISFAEINTSELLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|302386612|ref|YP_003822434.1| Peptidoglycan glycosyltransferase [Clostridium saccharolyticum WM1]
 gi|302197240|gb|ADL04811.1| Peptidoglycan glycosyltransferase [Clostridium saccharolyticum WM1]
          Length = 475

 Score = 39.2 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/186 (9%), Positives = 44/186 (23%), Gaps = 36/186 (19%)

Query: 30  YYTLLDTNTGHVIA-----ENYPDHP-------------------------WNPASLTKL 59
              +++ +TG ++A     +  P+                           + P S  KL
Sbjct: 161 AVVVMEPDTGKILAMVSKPDYNPNTLAADWSNLVAEDNNSGQLLNRATQGLYPPGSTFKL 220

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +TA     +++E  A     I       +           +     N  +          
Sbjct: 221 VTA---LEYMRENPANYRDYIFDCNGIYKNADYTIRCYHETAHGHQNLEQAFANSCNGAF 277

Query: 120 AVAIAESLCKTEKKFVQHMNNTSKN---LGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +    +      K     +   +     +  + + +   +G        TA         
Sbjct: 278 SNLGLQLNLNKWKNTADQLLFNTDLPLPIAGNKSSYSMEYGADTWEILQTAIGQGQTQIT 337

Query: 177 IKTDFP 182
              +  
Sbjct: 338 PIHNAM 343


>gi|300245054|gb|ADJ94120.1| carbapenem-hydrolyzing extended-spectrum beta lactamase GES-16
           [Serratia marcescens]
          Length = 287

 Score = 39.2 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|254498852|ref|ZP_05111560.1| D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin
          binding protein 4 [Legionella drancourtii LLAP12]
 gi|254351935|gb|EET10762.1| D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin
          binding protein 4 [Legionella drancourtii LLAP12]
          Length = 611

 Score = 39.2 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++D N+G  +        + PAS  KL
Sbjct: 57 VVVDLNSGETLYRRNAQKLFIPASNMKL 84


>gi|124257957|gb|ABM92960.1| blaGES-5-like extended-spectrum beta-lactamase [Pseudomonas
           aeruginosa]
          Length = 287

 Score = 39.2 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|109895419|gb|ABG47464.1| GES-5 extended-spectrum beta-lactamase [Pseudomonas aeruginosa]
 gi|109895421|gb|ABG47465.1| GES-5 extended-spectrum beta-lactamase [Pseudomonas aeruginosa]
          Length = 270

 Score = 39.2 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 28  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 86

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 87  ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 142 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 201

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 202 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 240


>gi|222159146|ref|YP_002563154.1| beta-lactamase GES-5 [Enterobacter cloacae]
 gi|40888716|gb|AAR97270.1| class A beta-lactamase [Escherichia coli]
 gi|89515723|gb|ABD75721.1| GES-5 extended-spectrum beta-lactamase [Pseudomonas aeruginosa]
 gi|114319154|gb|ABI63577.1| extended-spectrum beta-lactamase GES-5 [Klebsiella pneumoniae]
 gi|121722589|gb|ABM64784.1| extended spectrum beta-lactamase GES-5 [Pseudomonas aeruginosa]
 gi|167374775|gb|ABZ79219.1| beta-lactamase GES-5 [Enterobacter cloacae]
 gi|238865603|gb|ACR66835.1| beta-lactamase GES-5 [Klebsiella pneumoniae subsp. ozaenae]
 gi|255039697|gb|ACT99627.1| GES-5 [Pseudomonas aeruginosa]
 gi|294769320|gb|ADF36548.1| metallo-beta-lactamase blaGES-5 [Pseudomonas aeruginosa]
          Length = 287

 Score = 39.2 bits (89), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|260893385|ref|YP_003239482.1| penicillin-binding protein 2 [Ammonifex degensii KC4]
 gi|260865526|gb|ACX52632.1| penicillin-binding protein 2 [Ammonifex degensii KC4]
          Length = 646

 Score = 39.2 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 20/97 (20%), Gaps = 35/97 (36%)

Query: 22  IAETNKLPYYTLLDTNTGHVIA--------------------EN----YPDHPW------ 51
                      + D +TG ++A                           PD P       
Sbjct: 258 KGFPAPGGAAVVEDVHTGEILAMASYPSYDPSVFTRGLTPVEAKALFQNPDSPLLNRALS 317

Query: 52  --NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86
              P S  K++TA                 +  S   
Sbjct: 318 AYPPGSTFKMVTALAALEA---GIINPDFTVFCSGYY 351


>gi|289185668|gb|ADC91899.1| extended-spectrum beta-lactamase GES-14 [Acinetobacter baumannii]
 gi|316308410|gb|ADU56652.1| extended-spectrum beta-lactamase GES-14 [Acinetobacter baumannii]
          Length = 287

 Score = 39.2 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG       N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGARNDIGFFKAQERDYAVAV 255


>gi|120611221|ref|YP_970899.1| beta-lactamase [Acidovorax citrulli AAC00-1]
 gi|120589685|gb|ABM33125.1| Beta-lactamase [Acidovorax citrulli AAC00-1]
          Length = 300

 Score = 39.2 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 76/260 (29%), Gaps = 13/260 (5%)

Query: 11  AMLSNIFPFLSIAETNKLP-----YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +M S    F    +  +          LLD  TG     +  D  +   S  KL+ A  V
Sbjct: 23  SMGSGAGAFARAVQEVEASVGGRLGVALLDMATGRQ-DAHRGDERFPLCSTFKLLLAAHV 81

Query: 66  FSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
              + +    L   I+  K +  EY P+      G  MT++   +  +  S N  A  + 
Sbjct: 82  LRRVDQGHERLDRRISYRKSDLVEYSPATERHADGDGMTVEQLCEAAVTLSDNTAANLLL 141

Query: 125 ESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFP 182
            +     +   +++ + +T   L        +          T       +    + +  
Sbjct: 142 GTQGGPLELTAWLRSLGDTQTRLDRMEPALNDVPPGEVRDTTTPRAMARTVWAVTQGEAL 201

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
                 ++    +  +       A        G KTG       N        D+  + V
Sbjct: 202 SAAARARMLAWLVGNRTGDRRLRAGMPEGWRIGEKTGTGPRGTSNDAGLFWPPDRGAVMV 261

Query: 243 ---ILGALDR-NTRNKVSAS 258
              + G+      R+   A 
Sbjct: 262 SCYLTGSPAPAEQRDAAIAR 281


>gi|297561341|ref|YP_003680315.1| beta-lactamase [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296845789|gb|ADH67809.1| Beta-lactamase [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 305

 Score = 39.2 bits (89), Expect = 0.95,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 13/230 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G    E+ PD  +  AS  K +TA +V      ++  +   +T ++         
Sbjct: 68  VDTGSGEE-VEHRPDERFAYASTHKALTAALVLQQNTPEE--MEEVVTFTEEDLVDYSPV 124

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
           +     + MTL       +  S N  A  + E L      F   +     +  ++    +
Sbjct: 125 TEQHVDTGMTLMEVADAAVRYSDNTAANLLFEEL-GGPDAFEDELEAIGDD--VTDPERI 181

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT-----NWAVG 208
                      T+             +F       + +   +      NT       A  
Sbjct: 182 ETELNDWTPGDTSDTSTPRAMAGNLREFTLGDALPEDRREVLNDLLVNNTTGDALIRAGV 241

Query: 209 TFLGADGMKTGF-TCASGFNIVASAIQGDQSLIAVILGALDRNTR-NKVS 256
                 G KTG  +  +  +I          ++  ++ + +        +
Sbjct: 242 PEDWRVGDKTGAGSHGTRNDIAVIWPPEGDPIVLAVMSSREAEDAEYDDA 291


>gi|284031110|ref|YP_003381041.1| beta-lactamase [Kribbella flavida DSM 17836]
 gi|283810403|gb|ADB32242.1| beta-lactamase [Kribbella flavida DSM 17836]
          Length = 432

 Score = 39.2 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          PD  +   S+TK MTA +V     +    L  
Sbjct: 56 PDVQYRVGSITKTMTAVLVLQARDDGLLGLND 87


>gi|269932040|gb|ACZ54536.1| beta-lactamase GES-13 [Pseudomonas aeruginosa]
          Length = 287

 Score = 39.2 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 58/219 (26%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
           +   F     MT+  A +  +  S N     +   +          M    + +G S + 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN------- 204
                  +        RD        +T                  +++   N       
Sbjct: 157 LDRKEPEMNDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|153845293|ref|ZP_01993758.1| beta-lactamase TEM [Vibrio parahaemolyticus AQ3810]
 gi|149745125|gb|EDM56376.1| beta-lactamase TEM [Vibrio parahaemolyticus AQ3810]
          Length = 114

 Score = 39.2 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 11/95 (11%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
           F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6   FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
             S  K++    V S +   ++      TI +   
Sbjct: 66  MMSTFKVLLCGAVLSRIDAGQSNSVAAYTILRMTW 100


>gi|52850984|emb|CAH57529.1| penicillin-binding protein 1b [Streptococcus pneumoniae]
          Length = 443

 Score = 39.2 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 116 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 175

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 176 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 233

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 234 GYEIPEYGIESLPMGGGIEVTVAQH 258


>gi|52850986|emb|CAH57530.1| penicillin-binding protein 1b [Streptococcus pneumoniae]
          Length = 443

 Score = 39.2 bits (89), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +           + +
Sbjct: 116 VLMDNQTGAILCFVGGRNYQENQNNHAFDTKRSPASTTKPLLAYGIAIDQGLMGSETILS 175

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 176 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLREKGVDVKGYMEKM 233

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 234 GYEIPEYGIESLPMGGGIEVTVAQH 258


>gi|313205589|ref|YP_004044766.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Riemerella
          anatipestifer DSM 15868]
 gi|312444905|gb|ADQ81260.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Riemerella
          anatipestifer DSM 15868]
          Length = 466

 Score = 39.2 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 15/81 (18%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAENY 46
          M +FL+ I     S         + +K                 + + D   G+ I E  
Sbjct: 1  MTKFLMFILTFFYSLSLAQSVKDKLDKATKSFLNSPKMYAANMSFYVAD-ENGNFIYEYQ 59

Query: 47 PDHPWNPASLTKLMTAYVVFS 67
           +   + AS  K+ TA     
Sbjct: 60 GNKGLSTASTQKIFTAATALE 80


>gi|85375695|ref|YP_459757.1| Beta-lactamase class A [Erythrobacter litoralis HTCC2594]
 gi|84788778|gb|ABC64960.1| Beta-lactamase class A [Erythrobacter litoralis HTCC2594]
          Length = 338

 Score = 39.2 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 7/78 (8%)

Query: 34  LDTNTGH---VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           LD +TG    V+     D P+  AS +K+  A V  + +   K  L++   + +   +Y 
Sbjct: 77  LDLSTGREIGVL----ADQPFPMASTSKVAIAAVYLAGVDAGKWSLSSEWRLPRPGGKYV 132

Query: 91  PSNSTFKKGSTMTLDNAL 108
           P+ +      + + ++  
Sbjct: 133 PAKTLLDLMVSKSCNDCT 150


>gi|11513941|pdb|1E25|A Chain A, The High Resolution Structure Of Per-1 Class A Beta-
           Lactamase
          Length = 282

 Score = 39.2 bits (89), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/229 (9%), Positives = 61/229 (26%), Gaps = 21/229 (9%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
            P   +   S+ KL  A +V   + + K  L   + +++            K        
Sbjct: 36  NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFS 95

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
             ++ L+  S +       + L +        +++  +++G+  T  +            
Sbjct: 96  VPVQQLLQYSVSHSDNVACDLLFELV-GGPAALHDYIQSMGIKETAVVANEAQ--MHADD 152

Query: 166 TARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL-------------- 211
             +     S +   +  +            +   +                         
Sbjct: 153 QVQYQNWTSMKGAAEILKKFEQKTQLSETSQALLWKWMVETTTGPERLKGLLPAGTVVAH 212

Query: 212 --GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN-TRNKVSA 257
             G   +K G T A+  ++    +   + L+  +        +R   + 
Sbjct: 213 KTGTSQIKAGKTAATN-DLGIILLPDGRPLLVAVFVKDSAESSRTNEAI 260


>gi|299135491|ref|ZP_07028680.1| Beta-lactamase [Afipia sp. 1NLS2]
 gi|298589746|gb|EFI49952.1| Beta-lactamase [Afipia sp. 1NLS2]
          Length = 294

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D  +   S  KLM A  +   +++ +  L   +  S++        +     S MT+   
Sbjct: 65  DERFPMCSTFKLMAAAAILKRVEQGQETLERRVHFSQSDLVTYSPATEKHLESGMTVAEL 124

Query: 108 LKLLIVKSANDIAVAI 123
            +  I  S N     +
Sbjct: 125 CEAAITLSDNTAGNLM 140


>gi|295703598|ref|YP_003596673.1| hypothetical protein BMD_1464 [Bacillus megaterium DSM 319]
 gi|294801257|gb|ADF38323.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 259

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 11/204 (5%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
                   AS  KL+ A   F  +      LT     S        +         +   
Sbjct: 37  NSFIQQRAASTIKLLLAIEAFRQIDAGILDLT-----SVIQRMEKNTVGGAGVLKALPQL 91

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-----VVQ 160
             +K+  + +   I      +         + +N  +KNLGL  T               
Sbjct: 92  THIKVEELLTLMIIVSDNTATNELISLVGFEKINECAKNLGLKKTVLNRYMMDEIAVEKG 151

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
             +YT A D+      I           +     ++ +++ +   A          KTG 
Sbjct: 152 IDNYTCASDVVKCLREIYEGNLLQKSSREKIMRMLEMQQFQHKLPARIGSAFQAANKTGE 211

Query: 221 TCASGFNIVASAIQGDQSLIAVIL 244
              +  +  A  ++G+++  AV+L
Sbjct: 212 LQGAEHD-SAILMRGNETYYAVVL 234


>gi|606841|gb|AAA83417.1| beta-lactamase [Aeromonas sobria]
          Length = 264

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 25/247 (10%), Positives = 62/247 (25%), Gaps = 19/247 (7%)

Query: 1   MRQFLV--IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-YPDHPWNPASLT 57
           M + L+  ++A  +L  +         +      L     G  ++          PAS  
Sbjct: 1   MSRLLLSGLLATGLLCAV-------PASAASGCFLYADGNGQTLSSEGDCSSQLPPASTF 53

Query: 58  KLMTAYVVFSFLKEKKAMLTTPI--TISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKS 115
           K+    +          +           +   + P+             + +      +
Sbjct: 54  KIP---LALMGYDSGFLVNEEHPALPYKPSYDGWLPAWRETTTPRRWETYSVVWFSQQIT 110

Query: 116 ANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSW 175
                    + + + +        N  K+ GL+     ++  +        AR +  +  
Sbjct: 111 EWLGMERFQQYVDRFDYGNRDLSGNPGKHDGLTQAWLSSSLAISPEEQ---ARFLGKMVS 167

Query: 176 RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQG 235
                  Q + Y        + + +         +              G+  V  A + 
Sbjct: 168 GKLPVSAQTLQYTANILKVSEVEGWQIHGKTGMGYPKKLDGSLNRDQQIGW-FVGWASKP 226

Query: 236 DQSLIAV 242
            + LI V
Sbjct: 227 GKQLIFV 233


>gi|255012812|ref|ZP_05284938.1| D-alanyl-D-alanine carboxypeptidase [Bacteroides sp. 2_1_7]
          Length = 485

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 20/78 (25%), Gaps = 11/78 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
          M + +    +     +     + +  K                + D + G  +       
Sbjct: 1  MIRKISFFFLISCLYLSVGAQVPQPIKQFLRKPYMEGASFSLIVKDVHNGETVFAYDTLR 60

Query: 50 PWNPASLTKLMTAYVVFS 67
             PAS+ K +T      
Sbjct: 61 QLTPASVMKTVTTATALE 78


>gi|150009941|ref|YP_001304684.1| D-alanyl-D-alanine carboxypeptidase [Parabacteroides distasonis
          ATCC 8503]
 gi|149938365|gb|ABR45062.1| D-alanyl-D-alanine carboxypeptidase [Parabacteroides distasonis
          ATCC 8503]
          Length = 485

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 20/78 (25%), Gaps = 11/78 (14%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK-----------LPYYTLLDTNTGHVIAENYPDH 49
          M + +    +     +     + +  K                + D + G  +       
Sbjct: 1  MIRKISFFFLISCLYLSVGAQVPQPIKQFLRKPYMEGASFSLIVKDVHNGETVFAYDTLR 60

Query: 50 PWNPASLTKLMTAYVVFS 67
             PAS+ K +T      
Sbjct: 61 QLTPASVMKTVTTATALE 78


>gi|18844706|gb|AAL78275.1| K1 beta-lactamase [Klebsiella oxytoca]
          Length = 291

 Score = 39.2 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 234 VGDKTGGGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 291


>gi|322392582|ref|ZP_08066042.1| penicillin-binding protein 1B [Streptococcus peroris ATCC 700780]
 gi|321144574|gb|EFX39975.1| penicillin-binding protein 1B [Streptococcus peroris ATCC 700780]
          Length = 830

 Score = 39.2 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/145 (10%), Positives = 39/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTK-LMTAYVVFSFLKEKKAMLTT 78
            L+D  TG ++        ++       D   +PAS TK ++   +         A + +
Sbjct: 428 VLMDNKTGAILGFVGGRDYQSNQNNHAFDTKRSPASTTKPILVYGIAIDQGLMGSASILS 487

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
                 +        ++         +       + +       +        + +++ M
Sbjct: 488 NYPTKYSNGNPIMHVNSPGTAMMPLKEALSYSWNIPAYW--TYRMLREKGVDVRSYMEKM 545

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 546 GYYIPEYGIESLPMGGGIEVTVAQH 570


>gi|227502348|ref|ZP_03932397.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
 gi|227076902|gb|EEI14865.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
          Length = 292

 Score = 39.2 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/193 (8%), Positives = 44/193 (22%), Gaps = 26/193 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY-----TLLDTNTGHVIAENYPDHPWNPAS 55
           M++  +   +  LS +    + A +             +  ++G  ++           S
Sbjct: 11  MKKLAISSLVTALSFVTIPAAQAVSLDPHSVPERTQITVRHDSGATVSTANSHESRPALS 70

Query: 56  LTKLMTAY-------VVFSFLKEKKAMLTTPITISKNASEYPP--------------SNS 94
           L+K+   Y       V      E     +     S     YP                 +
Sbjct: 71  LSKIYLGYWVLKYGSVADKAQVEHMIRYSDDNVASDLDRRYPQAIPSIIQEFGLSETHYT 130

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
            +   +  + ++  +       + +A  I   +                   +       
Sbjct: 131 GYWGTTQTSSEDVARFTAEIQHDPVAAPIFAGMATAAPVAADGYRQDFGTDHIPGVWGTK 190

Query: 155 AHGVVQHGHYTTA 167
                    + + 
Sbjct: 191 FGWSDDRTIHASV 203


>gi|237809427|ref|YP_002893867.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Tolumonas auensis DSM 9187]
 gi|237501688|gb|ACQ94281.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Tolumonas auensis DSM 9187]
          Length = 484

 Score = 39.2 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 1  MRQFL---VIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASL 56
          M +F+     I +++L+      +I+            +  +  V A  + D    PAS 
Sbjct: 1  MLKFISSAFAIFLSVLTVCSAQAAISVPEGSRIALAFKEPGSDSV-AAYHGDTFMIPAST 59

Query: 57 TKLMTAYVV 65
           KL+TA   
Sbjct: 60 QKLLTALAA 68


>gi|13471048|ref|NP_102617.1| hypothetical protein mll0916 [Mesorhizobium loti MAFF303099]
 gi|14021792|dbj|BAB48403.1| mll0916 [Mesorhizobium loti MAFF303099]
          Length = 250

 Score = 39.2 bits (89), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 4/88 (4%)

Query: 22  IAETNKLPYYTLLDTNTGHVIAENYP-DHPWNPASLTKLMTAYVVFSF---LKEKKAMLT 77
            A    +    + D  +G V+ ++   D P++PAS  K+  + + +       E      
Sbjct: 5   SAPLGDVQCTLIADAASGKVLYQDGTCDQPFSPASTFKVPLSLIGYDAGILSDEHTPSWD 64

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLD 105
                +    +    +    +  ++   
Sbjct: 65  YKPEFNAAKRDQKIVDPVIWEKDSVLWY 92


>gi|316931589|ref|YP_004106571.1| beta-lactamase [Rhodopseudomonas palustris DX-1]
 gi|315599303|gb|ADU41838.1| Beta-lactamase [Rhodopseudomonas palustris DX-1]
          Length = 291

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 68/246 (27%), Gaps = 9/246 (3%)

Query: 18  PFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
              +     +          +LD++ G +I  +  D  +   S  K++ A +V + +  K
Sbjct: 33  AIAARFAELEARSGGRLGVCVLDSSNGRMI-GHRLDERFPMCSTFKVLAAGLVLARVDRK 91

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKT 130
           +  L   ++ +K+        +  +    MT+    +  I  S N     +  +      
Sbjct: 92  QESLDRRVSYTKSDLVTYSPATETRVEGGMTIAELCEAAITLSDNTAGNLLLGSFGGPAG 151

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
              F + + + +  L    T    A         +       L      D         +
Sbjct: 152 LTAFARSLGDQTTRLDRIETELNEALPGDARDTTSPRTIAQDLRALALGDALTPSSRALL 211

Query: 191 KGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR 249
                          A          KTG       N +A      +  LI  +      
Sbjct: 212 VAWMKANTTGGARIRAGVPSGWIVADKTGTGERGTANDIAVLWPPQRAPLIVTVYLTGAT 271

Query: 250 NTRNKV 255
            +R++ 
Sbjct: 272 VSRDQQ 277


>gi|229525284|ref|ZP_04414689.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae bv. albensis
          VL426]
 gi|229338865|gb|EEO03882.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae bv. albensis
          VL426]
          Length = 487

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 7  IIAMAMLSNIFPFLSIAETNK--LPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +  + ++   P  +          Y  L+ D  +     E      + PAS  K++TA 
Sbjct: 22 FLIASPINAQIPLTAATTKLPQGARYSLLIEDAASQQNTLELNTHLYYPPASTQKILTAL 81

Query: 64 VV 65
            
Sbjct: 82 AA 83


>gi|255308238|ref|ZP_05352409.1| putative penicillin-binding protein [Clostridium difficile ATCC
           43255]
          Length = 340

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/219 (10%), Positives = 55/219 (25%), Gaps = 14/219 (6%)

Query: 36  TNTGHVIAEN-----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
              G V+ E        D  ++ AS+TK + + ++   + +          +        
Sbjct: 46  ARKGKVVFEKYYNGYNTDDTFHVASVTKSIISALIGIAIDKGYIKDVDQKVVDFFPEYTC 105

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
             +   KK  T+     +           ++          K  +  +    + +G    
Sbjct: 106 SPSEVCKKAVTIRHLLTMTAPYPFKNMTESLERLCKQKDWIKYTLNQLGQKGE-IGTFKY 164

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                H +      TT +     +                   +   + +   N      
Sbjct: 165 SSAGTHLLSAIITKTTGKSAREFANEYLFKPIGMKIIPDYDMKDFGFEDFFGKNLKGWAK 224

Query: 211 L--GADGMKTGFTCASGFNIVASA------IQGDQSLIA 241
              G      G T ++   +          I  ++ +I+
Sbjct: 225 DRQGYSTGGWGLTLSARDMLRFGFLYLNDGIWNNKRIIS 263


>gi|163744646|ref|ZP_02152006.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Oceanibulbus indolifex HEL-45]
 gi|161381464|gb|EDQ05873.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Oceanibulbus indolifex HEL-45]
          Length = 510

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 15/39 (38%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + ++D  +G  +  +       PAS  K +TA      
Sbjct: 46 AFAVIDVESGIWLEASNATDGIPPASSIKAITALYALDQ 84


>gi|119716933|ref|YP_923898.1| beta-lactamase [Nocardioides sp. JS614]
 gi|119537594|gb|ABL82211.1| beta-lactamase [Nocardioides sp. JS614]
          Length = 417

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D  +   S+TK MTA +V   +++ +  L  P
Sbjct: 23 ADVQYRIGSITKTMTAVLVLQLVRDGRLGLDEP 55


>gi|4104150|gb|AAD01957.1| penicillin-binding protein homolog [Listeria monocytogenes]
          Length = 144

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 24/82 (29%), Gaps = 10/82 (12%)

Query: 259 LLSMGFYNKTDRKKINYIIK---------DFYQQNLSNEVPNISEEVCTTQKEIINYNTQ 309
           +L   F N   ++      K         D  +++    V   + ++    K        
Sbjct: 1   MLDYAFNNFKVKEVQKAGSKVKNPSTIAVDKGKEDTVGLVTKDAVKLVVP-KNGNEPKLN 59

Query: 310 MKEAKDKESHFIDFEKITLLKN 331
            K    +++     +K T +  
Sbjct: 60  TKVTMKEKTIEAPVKKGTEVGK 81


>gi|66269636|gb|AAY43207.1| GES-9 [Pseudomonas aeruginosa]
          Length = 287

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG       N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGSRNDIGFFKAQERDYAVAV 255


>gi|115034|sp|P22391|BLO1_KLEOX RecName: Full=Beta-lactamase OXY-1; AltName: Full=Penicillinase;
           Flags: Precursor
 gi|456261|emb|CAA82916.1| beta-lactamase OXY-1-1 [Klebsiella oxytoca]
 gi|456263|emb|CAA82917.1| beta-lactamase [Klebsiella oxytoca]
 gi|530143|gb|AAA25084.1| beta-lactamase [Klebsiella oxytoca]
          Length = 291

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 291


>gi|289644227|ref|ZP_06476316.1| penicillin-binding protein transpeptidase [Frankia symbiont of
           Datisca glomerata]
 gi|289505950|gb|EFD26960.1| penicillin-binding protein transpeptidase [Frankia symbiont of
           Datisca glomerata]
          Length = 593

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 10/73 (13%)

Query: 20  LSIAETNKLPYYTL-LDTNTGHVI---------AENYPDHPWNPASLTKLMTAYVVFSFL 69
            ++A  +K     + +D  TG V+              +  + P S  K++TA       
Sbjct: 311 AAMATASKPAGALVAVDVRTGGVLALVNHPLNGYGRAINGRYPPGSTFKIVTATAALLAG 370

Query: 70  KEKKAMLTTPITI 82
           K+    L    T+
Sbjct: 371 KDANTPLDCTQTV 383


>gi|16263521|ref|NP_436314.1| putative Beta lactamase [Sinorhizobium meliloti 1021]
 gi|14524221|gb|AAK65726.1| Beta-lactamase [Sinorhizobium meliloti 1021]
          Length = 281

 Score = 39.2 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 64/215 (29%), Gaps = 7/215 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           L+ +TG     +  D  +   S  K + + +V + + +    L   I  SK    Y    
Sbjct: 39  LNLSTGAR-VGHRADERFLMCSTFKALASAMVLARVDKGVEKLDRRIVFSKEVLVYFSPV 97

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK---FVQHMNNTSKNLGLSAT 150
           +  + G        L +  +  +++ A+ +             FV+   +    L     
Sbjct: 98  TETRVGGEGMSVAELCMATLTQSDNTAINLLLESFGGPPALTEFVRSFGDELTRLDRFEP 157

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKT-DFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                 G       TT   M     ++   +        Q+ G  +  K   +   A   
Sbjct: 158 ELNEHDGPDDLRDTTTPGAMMETLRKLIFGEVLSRSSRAQLAGWMVMNKTGDSRLRAGMP 217

Query: 210 FLGADGMKTGFTCASG--FNIVASAIQGDQSLIAV 242
                  KTG         N +A A   ++  I V
Sbjct: 218 ESWMIADKTGGNGNQHANNNDIAVAWSPNRGAIVV 252


>gi|296166691|ref|ZP_06849116.1| PBP4 family D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295897956|gb|EFG77537.1| PBP4 family D-alanyl-D-alanine carboxypeptidase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 450

 Score = 38.8 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMT---AYVVFSFL 69
           + D  TG  + +   D P  PAS  K++T   A +     
Sbjct: 82  VTDAMTGKELWQVAADLPLVPASTNKVLTSAAALLTLDHQ 121


>gi|307726917|ref|YP_003910130.1| Beta-lactamase [Burkholderia sp. CCGE1003]
 gi|307587442|gb|ADN60839.1| Beta-lactamase [Burkholderia sp. CCGE1003]
          Length = 315

 Score = 38.8 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 66/237 (27%), Gaps = 13/237 (5%)

Query: 33  LLDTNTGHVIAEN-YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS-----KNA 86
           ++DT +G  +      D  +   S  KL+ A  V + +   +  L   I  S      N+
Sbjct: 71  IVDTTSG--LHAGLRADERFPMCSTFKLLAAGAVLARVDRGEENLQRRIVYSQSELVPNS 128

Query: 87  SEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKN 144
                        + M++    K  I  S N  A  + +S         F + + +    
Sbjct: 129 PATSRHTRERTGSAGMSIAELCKAAITLSDNTAANLLLQSFGGPAALTAFARSLGDGMTR 188

Query: 145 LGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
           L  +      A         T    +  L   +  +        Q+       +      
Sbjct: 189 LDRNEPTLNEAAPGDPRDTTTPNAMLGNLRALVMGEQLSSTSRVQLLAWLAANETGGARI 248

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAV---ILGALDRNTRNKVSAS 258
            A        G KTG       N VA      +  I V   + G      R   + +
Sbjct: 249 RARLPKDWGVGDKTGTGGHGTANDVAILWPPGRGPILVAVYLTGTAGTAARCNAAIA 305


>gi|85714967|ref|ZP_01045952.1| Penicillin-binding protein, transpeptidase [Nitrobacter sp.
           Nb-311A]
 gi|85698164|gb|EAQ36036.1| Penicillin-binding protein, transpeptidase [Nitrobacter sp.
           Nb-311A]
          Length = 579

 Score = 38.8 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 32/139 (23%), Gaps = 26/139 (18%)

Query: 26  NKLPYYTLLDTNTGHVIA--------------ENYPDH-------PWNPASLTKLMTAYV 64
            K     + +  TG +IA               + PD         +   S  K  T  +
Sbjct: 245 AKAASGIVSNVRTGEIIAMVSLPDFDPNNPKEAHDPDRINRLTTGVYEMGSTFKAFTLAM 304

Query: 65  VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
                K     +         A       +           N  ++    S    A    
Sbjct: 305 ALDSGKYGLNSMWD-----ARAPLRYGRFTIHDDHRMGRFINMKEVFTYSSNIGAARIAL 359

Query: 125 ESLCKTEKKFVQHMNNTSK 143
               +  K F++ M    +
Sbjct: 360 AQGVEAHKAFLRKMGQMDR 378


>gi|300782261|ref|YP_003762552.1| lipoprotein [Amycolatopsis mediterranei U32]
 gi|299791775|gb|ADJ42150.1| lipoprotein [Amycolatopsis mediterranei U32]
          Length = 293

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 1/49 (2%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           Y ++D  TG V + +     +  ASL KL  A            +   
Sbjct: 24 SYIVVDQETGTV-SASDEHKQYRSASLVKLFIALDYLESHGPDYEIPAD 71


>gi|288940270|ref|YP_003442510.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Allochromatium
          vinosum DSM 180]
 gi|288895642|gb|ADC61478.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Allochromatium
          vinosum DSM 180]
          Length = 409

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +  + + +         +A+   LP  +LL    G        +    PAS  KL+TAY
Sbjct: 24 LIAALWLGLAHTALADDPVAQVRALPQASLLVKERGQDRIAYQAETARIPASTMKLLTAY 83

Query: 64 VVFS 67
              
Sbjct: 84 AALE 87


>gi|83717141|ref|YP_439646.1| class A beta-lactamase [Burkholderia thailandensis E264]
 gi|83650966|gb|ABC35030.1| class A beta-lactamase precursor [Burkholderia thailandensis E264]
          Length = 322

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 83/276 (30%), Gaps = 22/276 (7%)

Query: 1   MRQFLVIIAMA--MLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAE 44
           +R+ L+I A++  ++    P    A                     +  LDT TG  I  
Sbjct: 34  LRRSLLIAAVSAPLVGACAPLRDNARNVAAEQQLRELESTFDGRLGFVALDTATGARI-A 92

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           +  D  +   S  K M +  V +      A+L   I  +K         +    G+ MT+
Sbjct: 93  HRADERFPFCSTFKTMLSAAVLARSAGDAALLQRRIPYAKRDLVRYSPITEKHVGAGMTV 152

Query: 105 DNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
                  +  S N  A  +       +    + + + + +  L    T    A    +  
Sbjct: 153 AELCAATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRRETELNTAIPGDERD 212

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             T A   A +   +  D        Q+    +  K       A          KTG   
Sbjct: 213 TTTPAAMAASVRRLLVGDALGTAQRAQLNAWMLGNKTGDARIRAGVPAGWRVADKTGTGD 272

Query: 223 ASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSA 257
               N +  A   D+  ++ V+       +RN  + 
Sbjct: 273 YGTGNDIGVAYPPDRAPIVFVV--YTTMRSRNAQAR 306


>gi|1705476|sp|P52664|BLAB_PROVU RecName: Full=Beta-lactamase; AltName: Full=Cefuroximase; Flags:
           Precursor
 gi|511056|emb|CAA56427.1| beta-lactamase [Proteus vulgaris]
          Length = 300

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    V    +++  +L   ITI K+        +     + M+L  
Sbjct: 67  GEERFAMASTSKVMAVAAVLKESEKQAGLLDKNITIKKSDLVAYSPITEKHLVTGMSLAQ 126

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I + L    K  +F + +N+ +  L         A         
Sbjct: 127 LSAATLQYSDNTAMNKILDYLGGPAKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 186

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF-TCA 223
           +       L      D        Q+           ++  A        G KTG     
Sbjct: 187 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDHSIKAGLPKHWIVGDKTGSGDYG 246

Query: 224 SGFNIVASAIQGDQSLIAVI 243
           +  +I     +    LI V+
Sbjct: 247 TTNDIAVIWPKNHAPLILVV 266


>gi|322691771|ref|YP_004221341.1| hypothetical protein BLLJ_1582 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456627|dbj|BAJ67249.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|312133971|ref|YP_004001310.1| dacb [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773270|gb|ADQ02758.1| DacB [Bifidobacterium longum subsp. longum BBMN68]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|291516362|emb|CBK69978.1| D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
           [Bifidobacterium longum subsp. longum F8]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|260914819|gb|ACX54270.1| beta-lactamase blaCTX-M-5 [Salmonella enterica]
 gi|260914822|gb|ACX54272.1| beta-lactamase blaCTX-M-5 [Salmonella enterica]
          Length = 229

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                TMTL       +  S N     +   L          +   +++LG
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHL-----GGPDKVTAFARSLG 159


>gi|227546575|ref|ZP_03976624.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|227212892|gb|EEI80771.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|213691451|ref|YP_002322037.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213522912|gb|ACJ51659.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457523|dbj|BAJ68144.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|206564002|ref|YP_002234765.1| putative beta-lactamase [Burkholderia cenocepacia J2315]
 gi|198040042|emb|CAR56023.1| putative beta-lactamase, class A [Burkholderia cenocepacia J2315]
          Length = 312

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 67/226 (29%), Gaps = 5/226 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G VI E+     +   S  K M +  V +   E+  +L   +T +K         
Sbjct: 73  IDTASGRVI-EHRAGERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVTYTKADLVNYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    G+ MT+    +  I  S N  A  + +          + + + + +  L    T 
Sbjct: 132 SEKHVGAGMTVAALCEATIQYSDNSAANLLMKLIGGPSAVTAYARSIGDDAFRLDRWETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A +      D        Q+       K       A     
Sbjct: 192 LNTALPGDPRDTTTPAAMAASIRVLTLGDALPAAQRAQLVAWLRGNKVGDKRIRAGVPAG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR-NTRNKV 255
              G KTG       N         +  ++  +     R + R K 
Sbjct: 252 WVVGDKTGTGDYGTTNDAGVIWPTSRAPIVLAVYYTQTRADARAKD 297


>gi|46190492|ref|ZP_00121461.2| COG2027: D-alanyl-D-alanine carboxypeptidase (penicillin-binding
           protein 4) [Bifidobacterium longum DJO10A]
 gi|189440707|ref|YP_001955788.1| D-alanyl-D-alanine carboxypeptidase [Bifidobacterium longum DJO10A]
 gi|189429142|gb|ACD99290.1| D-alanyl-D-alanine carboxypeptidase [Bifidobacterium longum DJO10A]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|302868686|ref|YP_003837323.1| beta-lactamase [Micromonospora aurantiaca ATCC 27029]
 gi|302571545|gb|ADL47747.1| beta-lactamase [Micromonospora aurantiaca ATCC 27029]
          Length = 436

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK MTA +V       +  L  P
Sbjct: 50 DGDLQYRVGSITKTMTAVLVMQQRDAGRLALDDP 83


>gi|219986600|gb|ACL68649.1| beta-lactamase [Burkholderia stabilis]
          Length = 229

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 1/91 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G +  E+ P+  +   S  K M +  V +   E+  +L   +T SK         
Sbjct: 50  IDTASGRI-VEHRPNERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVTYSKADLVNYSPV 108

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIA 124
           +     + MT+    +  I  S N  A  + 
Sbjct: 109 TEKHVDTGMTVAAMCEAAIQYSDNSAANLLM 139


>gi|332002539|gb|AED99300.1| class A extended-spectrum beta-lactamase GES-1 [Pseudomonas
           aeruginosa]
          Length = 265

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 32  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 90

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 91  ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 145

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 146 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 205

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 206 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 244


>gi|206601279|gb|ACI16358.1| beta-lactamse [Enterobacter aerogenes]
          Length = 235

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 56/216 (25%), Gaps = 14/216 (6%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G V++ +  +  +   S  K++    +   + +    L   IT +K+  +     ++   
Sbjct: 1   GKVLSSHRREERFPMMSTFKVLLCGAILVRVDKGLEQLERRITYNKHDLDDYSPLTSQHI 60

Query: 99  GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
              MT+       I  S N  A  +  ++   E       +       L           
Sbjct: 61  ADGMTVSELCNAAITTSDNTAANLLLSTIGGPEGLTHFLRSTGDSYTRLDRHEPSLNEAK 120

Query: 159 VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGM 216
                 TT       + +   +        + K +    +                    
Sbjct: 121 PGDERDTTTPAAMAQTLQKLLNESVLTEKSRKKLISWMQEDKVGGPLFRSVLPAGWMIAD 180

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTR 252
           KTG            A       I  +LG   + +R
Sbjct: 181 KTG------------AGDHGSRGIVALLGPGGKPSR 204


>gi|84180547|gb|ABC54715.1| GES-1 extended-spectrum beta-lactamase [Pseudomonas aeruginosa]
          Length = 265

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 23  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 81

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 82  ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 136

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 137 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 196

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 197 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 235


>gi|302035315|ref|YP_003799986.1| extended-spectrum beta-lactamase GES-1 [Escherichia coli]
 gi|196049619|pdb|2QPN|A Chain A, Ges-1 Beta-Lactamase
 gi|196049620|pdb|2QPN|B Chain B, Ges-1 Beta-Lactamase
 gi|6752461|gb|AAF27723.1|AF156486_2 beta-lactamase GES-1 [Klebsiella pneumoniae]
 gi|18958402|gb|AAL82589.1|AF355189_3 beta-lactamase GES-1 [Pseudomonas aeruginosa]
 gi|28207198|gb|AAO32356.1| GES-1 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
 gi|89515720|gb|ABD75719.1| GES-1 extended-spectrum beta-lactamase [Pseudomonas aeruginosa]
 gi|185178493|gb|ACC77587.1| beta-lactamase GES-1 [Pseudomonas aeruginosa]
 gi|255039696|gb|ACT99626.1| GES-1 [Pseudomonas aeruginosa]
 gi|262234437|gb|ACY39222.1| GES-1 [Escherichia coli]
 gi|294769318|gb|ADF36547.1| metallo-beta-lactamase blaGES-1 [Pseudomonas aeruginosa]
 gi|297341434|gb|ADI33308.1| beta-lactamase GES-1 [Pseudomonas aeruginosa]
 gi|307949946|gb|ADN96169.1| beta-lactamase blaGES-1 [Acinetobacter baumannii]
 gi|323709085|gb|ADY02561.1| GES-1 extended-spectrum beta-lactamase [Aeromonas media]
          Length = 287

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|291612655|ref|YP_003522812.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Sideroxydans lithotrophicus ES-1]
 gi|291582767|gb|ADE10425.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Sideroxydans lithotrophicus ES-1]
          Length = 494

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 14/79 (17%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK-------LPYYTLLDTNTGHV-----IAENYPD 48
          M++    + + +  N+      A   +             ++     V     +      
Sbjct: 1  MKRPYAALLLCLAVNVHAASLPATVVQELKNAHIPRSGIAVEVR--EVGKHAPLISINAQ 58

Query: 49 HPWNPASLTKLMTAYVVFS 67
           P NPAS  KL+T Y    
Sbjct: 59 RPMNPASTMKLLTTYSSLD 77


>gi|239929773|ref|ZP_04686726.1| hypothetical protein SghaA1_16220 [Streptomyces ghanaensis ATCC
          14672]
 gi|291438099|ref|ZP_06577489.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
          14672]
 gi|291340994|gb|EFE67950.1| D-alanyl-D-alanine carboxypeptidase [Streptomyces ghanaensis ATCC
          14672]
          Length = 362

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
          ++D  +G  +          PAS TK+ TA    S L  + 
Sbjct: 1  MVDVASGKRLYGTGSGDALVPASTTKIATAVAALSALGPEH 41


>gi|238058429|gb|ACR39368.1| extended-spectrum beta-lactamase [Acinetobacter baumannii]
 gi|240114398|gb|ACS44714.1| GES-11 [Acinetobacter baumannii]
 gi|310769857|gb|ADP21503.1| GES-11 [Acinetobacter baumannii]
          Length = 287

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG       N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGARNDIGFFKAQERDYAVAV 255


>gi|329910020|ref|ZP_08275199.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium
          IMCC9480]
 gi|327546300|gb|EGF31325.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium
          IMCC9480]
          Length = 461

 Score = 38.8 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 14 SNIFPFLSIAETNK--LPYYT---LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          + +   ++ A       P      ++D  +G  +     + P NPAS  KL+T      
Sbjct: 13 AGLPAPVAAAFKRAGIAPSGIGIEVVDMASGRNVLSLNSELPLNPASTMKLLTTSAALD 71


>gi|294498248|ref|YP_003561948.1| hypothetical protein BMQ_1482 [Bacillus megaterium QM B1551]
 gi|294348185|gb|ADE68514.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 259

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 13/205 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSNSTFKKGSTMTL 104
                   AS  KL+ A   F  + E    LT+    + KN            + + + +
Sbjct: 37  NSFIQQRAASTIKLLLAIEAFRQIDEGILALTSVIQRMEKNTVGGAGILRALPRLTHIKV 96

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG-----VV 159
           +  L L+I+ S N     +   +        + +N  +KNLGL  T              
Sbjct: 97  EELLTLMIIVSDNTATNELISLV------GFEKINECAKNLGLKKTVLNRYMMDEIAVEK 150

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
              +YT A D+      I           +     ++ +++ +   A          KTG
Sbjct: 151 GIDNYTCASDVVKCLREIYEGNLLQKSSREKIMRMLEMQQFQHKLPARIGSAFQAANKTG 210

Query: 220 FTCASGFNIVASAIQGDQSLIAVIL 244
               +  +  A  ++G+++  AV+L
Sbjct: 211 ELQGAEHD-SAILMRGNETYYAVVL 234


>gi|13310177|gb|AAK18183.1| beta-lactamase IBC-2 [Pseudomonas aeruginosa]
          Length = 287

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 55/219 (25%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +L +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQLAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|126149279|dbj|BAF47412.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 214

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  +  +  D  +   S  K + A  V    +   A+L   + +          
Sbjct: 35  LLDTGSGRRL-GHRQDERFPLCSTFKSVLAATVLKQAERDPALLDQRLPVRAQDILEHAP 93

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +    G  +T+ +  +  ++ S N  A  +  ++     
Sbjct: 94  VTRRHVGKDLTVRDLCRATLITSDNTAANLLFAAIGGPPA 133


>gi|126149277|dbj|BAF47411.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 207

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  +  +  D  +   S  K + A  V    +   A+L   + +          
Sbjct: 30  LLDTGSGRRL-GHRQDERFPLCSTFKSVLAATVLKQAERDPALLDQRLPVRAQDILEHAP 88

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +    G  +T+ +  +  ++ S N  A  +  ++     
Sbjct: 89  VTRRHVGKDLTVRDLCRATLITSDNTAANLLFAAIGGPPA 128


>gi|74474882|dbj|BAE44429.1| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 219

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           LLDT +G  +  +  D  +   S  K + A  V    +   A+L   + +          
Sbjct: 51  LLDTGSGRRL-GHRQDERFPLCSTFKSVLAATVLKQAERDPALLDQRLPVRAQDILEHAP 109

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
            +    G  +T+ +  +  ++ S N  A  +  ++     
Sbjct: 110 VTRRHVGKDLTVRDLCRATLITSDNTAANLLFAAIGGPPA 149


>gi|56808857|ref|ZP_00366568.1| COG2367: Beta-lactamase class A [Streptococcus pyogenes M49 591]
          Length = 428

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++K+      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKELAENKTLTYTKDVNHFYGDYDPLGSGKISKIP 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|302552013|ref|ZP_07304355.1| penicillin-binding protein transpeptidase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469631|gb|EFL32724.1| penicillin-binding protein transpeptidase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 543

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 40/152 (26%), Gaps = 20/152 (13%)

Query: 13  LSNIFPFLSIAETNKL------PYYTLLDTNTGHVIA-------ENYP--DHPWNPASLT 57
           L+      + A   K            +   TG V+A                  P S  
Sbjct: 241 LTTTISPSAQAAAEKAVKRFDESSVVAVKPTTGEVLAVANNRTDGFNAAFQGQAAPGSTM 300

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K+MTA ++          +  P     +A           +G     +  L    ++S N
Sbjct: 301 KIMTAAMLIDN---GVTSMNGPAPCPSDAMWQ-GQTFKNLQGMKPDENATLAGSFMRSCN 356

Query: 118 DIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
              + + +    T+    +        LG   
Sbjct: 357 TAFIKLIDEKPLTDASLTEEAEERF-GLGRDN 387


>gi|284050950|ref|ZP_06381160.1| hypothetical protein AplaP_05683 [Arthrospira platensis str.
           Paraca]
          Length = 449

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           P +PASL K+  A  +     E++      I +         S+   +   + +L   + 
Sbjct: 230 PASPASLIKVPVAIALLHKAAEEQVSFDKEIYVEGGNFTEDASS--IRARKSYSLQMLMA 287

Query: 110 LLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +I  S+N     + +        K ++        +                G  +   
Sbjct: 288 QMIDHSSNIATNQLIDYLGSDYINKLLERHGYKQTRVQFKLMGDRIMPFRPGRGRNSMTS 347

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           D          ++        I+ L  +  +        G      G KTG         
Sbjct: 348 DELTEMMVEIYNYEHPHSELLIEALSHQYDREIGYQALQGLKAQWLGEKTGQNSRVIGTT 407

Query: 229 VASAIQGDQSLIAVILGALD 248
           +A++I G++ +I +   +  
Sbjct: 408 LAASIDGERYIITITDNSAG 427


>gi|225350937|ref|ZP_03741960.1| hypothetical protein BIFPSEUDO_02512 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158393|gb|EEG71635.1| hypothetical protein BIFPSEUDO_02512 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 481

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A A  + I  F + A      Y   +    G+V+AE+  D  + PAS  K +TAY V + 
Sbjct: 79  AAAAKALISQFETAASDFGDEYAIAIADAAGNVVAEHALDKSYTPASTMKTLTAYAVATT 138

Query: 69  LKEK 72
           L   
Sbjct: 139 LDMG 142


>gi|224814398|gb|ACN65419.1| beta-lactamase [Klebsiella pneumoniae]
          Length = 281

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 69/276 (25%), Gaps = 22/276 (7%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPY-------YTLLDTNTGHVIAENYPDH 49
           MR   + +   + +      +     +              Y  +D      +A      
Sbjct: 1   MRYVRLCLFSLIAALPLAVFASPPPLEQITRSESQLAGRVGYVEMDL-----LAAWRASE 55

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
            +   S  K++    V + +      L   I   +         S       MT+     
Sbjct: 56  RFPLMSTFKVLLCGAVLARVDAGDEQLDRRIRYRQQDLVDYSPVSEKHLADGMTVGELCA 115

Query: 110 LLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
             I  S N     + +          F++ + +    L    T    A         T A
Sbjct: 116 AAITMSDNSAGNLLLKSVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDVRDTTTPA 175

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
              A L   + +         Q+    +  +       AV         KTG        
Sbjct: 176 SMAATLRKLLTSHTLSARSQQQLLQWMVDDQVAGPLIRAVLPAGWFIADKTGAGERGSRG 235

Query: 228 IVASAIQGDQ--SLIAVILGAL--DRNTRNKVSASL 259
           IVA      +   ++ + L         RN+  A +
Sbjct: 236 IVALLGPNGKAERIVVIYLRDTPATMAERNQQIARI 271


>gi|212716398|ref|ZP_03324526.1| hypothetical protein BIFCAT_01321 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660651|gb|EEB21226.1| hypothetical protein BIFCAT_01321 [Bifidobacterium catenulatum DSM
           16992]
          Length = 481

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           A A  + I  F + A      Y   +    G+V+AE+  D  + PAS  K +TAY V + 
Sbjct: 79  AAAAKALISQFETAASDFGDEYAIAIADAAGNVVAEHALDKSYTPASTMKTLTAYAVATT 138

Query: 69  LKEK 72
           L   
Sbjct: 139 LDMG 142


>gi|319654718|ref|ZP_08008797.1| hypothetical protein HMPREF1013_05419 [Bacillus sp. 2_A_57_CT2]
 gi|317393634|gb|EFV74393.1| hypothetical protein HMPREF1013_05419 [Bacillus sp. 2_A_57_CT2]
          Length = 261

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 65/207 (31%), Gaps = 13/207 (6%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTM 102
           E   D   + ASL K+       S  +     L     +                KG  M
Sbjct: 33  ETNADDVISSASLIKVPILLAGLSQAENALLDLNEEAEVKDAARVGGAGVLQAMSKGLKM 92

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ-- 160
            + + + L+++ S N     I E L       ++ +N   K+LG + T         +  
Sbjct: 93  KVIDLMTLMVIVSDNTATNLIIERL------GIEKINQFIKSLGFNCTELNRKMMDFEAL 146

Query: 161 ---HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GM 216
                + TTARDM      +  +      + +     ++ ++Y N               
Sbjct: 147 KNGMDNTTTARDMVYGMKALAENSLLSGKFTEKALDILEKQQYKNKLANTMDTEKVKVAS 206

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVI 243
           KTG       +      +G+    AV+
Sbjct: 207 KTGELPGIEHDCAIFTHKGNTVYAAVL 233


>gi|86160920|gb|ABC86901.1| beta-lactamase [Photobacterium leiognathi]
          Length = 294

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 78/271 (28%), Gaps = 8/271 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              +++A  +         +         +L+ N G  +     +  +   S  K +   
Sbjct: 24  FSAMSVASTNIDSAIKHAEQQLGAKVGVSVLNAN-GDSLYGYNSEQRFPLMSTFKTLACA 82

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
            +    +  K M+     ++ +A          K G+ ++L +A    +  S N  A  +
Sbjct: 83  KLLHDNQITKGMMDKTYPVTADAILDYAPVFKDKIGTEVSLKDACFATMTTSDNSAANFV 142

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFP 182
              +   E      ++N+     L     +            TT   M     ++     
Sbjct: 143 LAHIGGAEGVTKFLIDNSDNVTRLDRIEPLLNEATPGDKRDTTTPYAMNETITKLVLGDA 202

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCASGFNIVASAIQGDQS--L 239
                       +K  K  N  +      G +   ++G        I A      +   +
Sbjct: 203 LNPASKAQLTEWMKANKVSNGLFRSVLPQGWEIADRSGAGGYGSRGITAVVWNEQKQPLV 262

Query: 240 IAVILGAL--DRNTRNKVSASLLSMGFYNKT 268
           I+V L         R+K  A + +  F   T
Sbjct: 263 ISVYLTGTEVSIPERDKEIAKIGNAIFERYT 293


>gi|319954232|ref|YP_004165499.1| peptidase s13 d-ala-d-ala carboxypeptidase c [Cellulophaga
          algicola DSM 14237]
 gi|319422892|gb|ADV50001.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cellulophaga
          algicola DSM 14237]
          Length = 423

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 25/82 (30%), Gaps = 16/82 (19%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY---------------TLLDTNTGHVIAEN 45
          MR+   I+++          +  +  +                    + D      I + 
Sbjct: 1  MRRIF-ILSLITSLLYSCATTKIKKIRKETAQMLTESLFDNQFLGVFIYDPLNNDTILKY 59

Query: 46 YPDHPWNPASLTKLMTAYVVFS 67
            +  + PAS TK+ T Y V  
Sbjct: 60 NSEKYFTPASTTKIATLYTVLK 81


>gi|116620153|ref|YP_822309.1| D-alanyl-D-alanine carboxypeptidase [Candidatus Solibacter
          usitatus Ellin6076]
 gi|116223315|gb|ABJ82024.1| D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13
          [Candidatus Solibacter usitatus Ellin6076]
          Length = 502

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          ++D  +G  + E  PDH + PAS  KL +  +  
Sbjct: 49 IVDLASGKTLYELNPDHYFVPASNAKLFSTALAL 82


>gi|260161322|emb|CBG22732.1| extended spectrum beta-lactamase [Acinetobacter baumannii]
 gi|310769861|gb|ADP21506.1| GES-12 [Acinetobacter baumannii]
          Length = 287

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG       N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGACANGARNDIGFFKAQERDYAVAV 255


>gi|227502054|ref|ZP_03932103.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium accolens ATCC
           49725]
 gi|227077209|gb|EEI15172.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium accolens ATCC
           49725]
          Length = 451

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++D+ TG V+ E   D    PAS TK+
Sbjct: 107 VIDSETGTVVWERAADKALTPASSTKV 133


>gi|218439342|ref|YP_002377671.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           7424]
 gi|218172070|gb|ACK70803.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           7424]
          Length = 296

 Score = 38.8 bits (88), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           G VI  +  D  + PAS TKL T       
Sbjct: 92  GTVIYSHNADKFFIPASNTKLFTTAAALHK 121


>gi|301307822|ref|ZP_07213778.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 20_3]
 gi|300834165|gb|EFK64779.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 20_3]
          Length = 485

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 7/71 (9%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
          F +I  + +         I +  + P          + + N+G  +          PAS+
Sbjct: 8  FFLISCLYLSVGAQTPQPIKQFLRKPYMEGASFSLIVKEVNSGETVFAYDTIRQLTPASV 67

Query: 57 TKLMTAYVVFS 67
           K +T      
Sbjct: 68 MKTVTTATALE 78


>gi|298374298|ref|ZP_06984256.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 3_1_19]
 gi|298268666|gb|EFI10321.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 3_1_19]
          Length = 485

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 7/71 (9%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
          F +I  + +         I +  + P          + + N+G  +          PAS+
Sbjct: 8  FFLISCLYLSVGAQTPQPIKQFLRKPYMEGASFSLIVKEVNSGETVFAYDTIRQLTPASV 67

Query: 57 TKLMTAYVVFS 67
           K +T      
Sbjct: 68 MKTVTTATALE 78


>gi|262382755|ref|ZP_06075892.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 2_1_33B]
 gi|262295633|gb|EEY83564.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 2_1_33B]
          Length = 483

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 7/71 (9%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
          F +I  + +         I +  + P          + + N+G  +          PAS+
Sbjct: 8  FFLISCLYLSVGAQTPQPIKQFLRKPYMEGASFSLIVKEVNSGETVFAYDTIRQLTPASV 67

Query: 57 TKLMTAYVVFS 67
           K +T      
Sbjct: 68 MKTVTTATALE 78


>gi|256838717|ref|ZP_05544227.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Parabacteroides sp. D13]
 gi|256739636|gb|EEU52960.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Parabacteroides sp. D13]
          Length = 485

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 7/71 (9%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETNKLP-------YYTLLDTNTGHVIAENYPDHPWNPASL 56
          F +I  + +         I +  + P          + + N+G  +          PAS+
Sbjct: 8  FFLISCLYLSVGAQTPQPIKQFLRKPYMEGASFSLIVKEVNSGETVFAYDTIRQLTPASV 67

Query: 57 TKLMTAYVVFS 67
           K +T      
Sbjct: 68 MKTVTTATALE 78


>gi|209558596|ref|YP_002285068.1| hypothetical protein Spy49_0010 [Streptococcus pyogenes NZ131]
 gi|209539797|gb|ACI60373.1| hypothetical protein Spy49_0010 [Streptococcus pyogenes NZ131]
          Length = 428

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYTKDVNHFYGDYDPLGSGKISKIP 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|260914816|gb|ACX54268.1| beta-lactamase blaCTX-M-5 [Salmonella enterica]
          Length = 226

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K +L   + I K+        + 
Sbjct: 56  ADNSQILY--RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKKSDLVNYNPIAE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
                TMTL       +  S N     +   L          +   +++LG
Sbjct: 114 KHVNGTMTLAELGAAALQYSDNTAMNKLIAHL-----GGPDKVTAFARSLG 159


>gi|13096333|pdb|1DY6|A Chain A, Structure Of The Imipenem-Hydrolyzing Beta-Lactamase Sme-1
 gi|13096334|pdb|1DY6|B Chain B, Structure Of The Imipenem-Hydrolyzing Beta-Lactamase Sme-1
          Length = 267

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 59/219 (26%), Gaps = 6/219 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
               +DT +G+       D  +   S  K   A  V   +++KK  +   +       EY
Sbjct: 22  GVFAIDTGSGNT-FGYRSDERFPLCSSFKGFLAAAVLERVQQKKLDINQKVKYESRDLEY 80

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKN---LG 146
               +T  KGS MTL +     +  S N     I E      +   + M +   N   L 
Sbjct: 81  HSPITTKYKGSGMTLGDMASAALQYSDNGATNIIMERFLGGPEGMTKFMRSIGDNEFRLD 140

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
                   A    +    T       L+     +          +              A
Sbjct: 141 RWELELNTAIPGDKRDTSTPKAVANSLNKLALGNVLNAKVKAIYQNWLKGNTTGDARIRA 200

Query: 207 VGTFLGADGMKTGF--TCASGFNIVASAIQGDQSLIAVI 243
                   G KTG      +  +      +    LI  I
Sbjct: 201 SVPADWVVGDKTGSCGAYGTANDYAVIWPKNRAPLIVSI 239


>gi|291439642|ref|ZP_06579032.1| D-stereospecific endopeptidase [Streptomyces ghanaensis ATCC 14672]
 gi|291342537|gb|EFE69493.1| D-stereospecific endopeptidase [Streptomyces ghanaensis ATCC 14672]
          Length = 387

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 3/56 (5%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                + D  TG    E  P   +   S+TK   A V+     E +  L   +   
Sbjct: 71  SATAGVGDLRTGQ---ERSPHDRYRIGSVTKTFVATVLLQLEAEGRLSLDDTVDTW 123


>gi|289766973|ref|ZP_06526351.1| beta-lactamase [Streptomyces lividans TK24]
 gi|289697172|gb|EFD64601.1| beta-lactamase [Streptomyces lividans TK24]
          Length = 405

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              + D +TG  +     D      S+TK  TA  V   +++ +  L 
Sbjct: 72  AAGVADVDTGRPVT---ADLRHRVGSITKTFTAAAVLQQVEQGRIGLD 116


>gi|317129303|ref|YP_004095585.1| stage V sporulation protein D [Bacillus cellulosilyticus DSM 2522]
 gi|315474251|gb|ADU30854.1| stage V sporulation protein D [Bacillus cellulosilyticus DSM 2522]
          Length = 645

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 25/108 (23%), Gaps = 25/108 (23%)

Query: 31  YTLLDTNTGHVI-------AE-----------NYPDHP----WNPASLTKLMTAYVVFSF 68
              +D NTG ++        +              + P    + P S  K++T       
Sbjct: 249 AIAMDPNTGEILGMSSRPDYDPERFREVPPEIYNQNKPVWSQYEPGSTFKIITLAAALEE 308

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
                  L           E    N    K         L+++     
Sbjct: 309 ---GIVDLDEDEFFDPGYVEVAGQNIRCWKKGGHGSQTYLEVVQNSCN 353


>gi|256783090|ref|ZP_05521521.1| hydrolase [Streptomyces lividans TK24]
          Length = 372

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
             + D +TG  +     D      S+TK  TA  V   +++ +  L 
Sbjct: 39 AAGVADVDTGRPVT---ADLRHRVGSITKTFTAAAVLQQVEQGRIGLD 83


>gi|239931270|ref|ZP_04688223.1| D-stereospecific peptide hydrolase precursor [Streptomyces
           ghanaensis ATCC 14672]
          Length = 383

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 3/56 (5%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
                + D  TG    E  P   +   S+TK   A V+     E +  L   +   
Sbjct: 67  SATAGVGDLRTGQ---ERSPHDRYRIGSVTKTFVATVLLQLEAEGRLSLDDTVDTW 119


>gi|323492031|ref|ZP_08097196.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrio
          brasiliensis LMG 20546]
 gi|323313760|gb|EGA66859.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrio
          brasiliensis LMG 20546]
          Length = 476

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 6/68 (8%)

Query: 4  FLVIIAMAMLSNIFPFLSIAE----TNKLPYYTLLDTNTGHVIAEN--YPDHPWNPASLT 57
          F+ ++  A  +      + A              +D+       +     +  + PAS  
Sbjct: 6  FISLLVFAATTLSSQVSAYAPLNELPLGSRAALRVDSLQEQQHYQQSANQNQLFPPASTL 65

Query: 58 KLMTAYVV 65
          K++TA   
Sbjct: 66 KIVTALAA 73


>gi|40888718|gb|AAR97271.1| class A beta-lactamase [Klebsiella pneumoniae]
          Length = 287

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|60416719|emb|CAI43424.1| beta-lactamase [Klebsiella oxytoca]
          Length = 291

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 65/234 (27%), Gaps = 11/234 (4%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
             +     D  +   S  K+M A  V    +    ++   + I K+        +     
Sbjct: 60  QTLY--RGDERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITEKHLQ 117

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHG 157
           S MTL       +  S N     +   L   EK   F Q + + +  L  +     +A  
Sbjct: 118 SGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALNSAIP 177

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
             +    T       L      +        Q+            +  A      A G K
Sbjct: 178 GDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWAVGDK 237

Query: 218 TGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
           TG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 238 TGAGDYGTTNDIAVIWPENHAPLVLVTYFTQPQQDAKSRKEVLAAAAKIVTEGL 291


>gi|15966291|ref|NP_386644.1| putative beta-lactamase precursor protein [Sinorhizobium meliloti
           1021]
 gi|15075562|emb|CAC47117.1| Putative beta-lactamase precursor protein [Sinorhizobium meliloti
           1021]
          Length = 278

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 5/120 (4%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
            + +  TG  I E   D     AS  K          + E +  L  P  I+  A     
Sbjct: 19  VVRNLKTGETI-ERGADEETPSASTRKTSIMMAALKAVHEGRLALDEP--ITYEARFAEE 75

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
             S   +  T  +  +L+  I            + + +     ++ +++  K++G+  TH
Sbjct: 76  VASGMFRYLTPGIVISLRDAITGMMVLSDNVCTKMVFERL--TLEEVDSYCKSIGMHGTH 133


>gi|299137108|ref|ZP_07030291.1| beta-lactamase [Acidobacterium sp. MP5ACTX8]
 gi|298601623|gb|EFI57778.1| beta-lactamase [Acidobacterium sp. MP5ACTX8]
          Length = 293

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 18/154 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-----------YPDH 49
           MR    ++   +     P ++ A  ++       D + G V                P  
Sbjct: 1   MRPLSFLVLFTLT---APLIAQAPLHQQLATIAKDAH-GQVFVACSLPGVALDCNLNPHG 56

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI--SKNASEYPPSNSTFKKGSTMTLDNA 107
                S  KL  A  +   ++  K  L  PI    S                + + +   
Sbjct: 57  HPPMQSTFKLPLAVALLQQVERGKLKLDQPIRFLPSDRYPGTYSPLQDAHPEANVDVPLH 116

Query: 108 -LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
            L  L V  +++ A  I   L    +   + MN 
Sbjct: 117 DLLQLSVGESDNTATDILLRLIGGPQAVQESMNK 150


>gi|226228615|ref|YP_002762721.1| putative beta-lactamase precursor [Gemmatimonas aurantiaca T-27]
 gi|226091806|dbj|BAH40251.1| putative beta-lactamase precursor [Gemmatimonas aurantiaca T-27]
          Length = 304

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 28/179 (15%)

Query: 1   MRQF---LVIIAMAMLSNIFPFLSIAETNKLPY-----------------YTLLDTNTGH 40
           MR       I+  A+L +  P  + A                        Y++ +  TG 
Sbjct: 1   MRLLPALAAILIGALLVSASPASAQAVRPGPTSLRRVIDSLADAHRGVVGYSITNLETGE 60

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKG 99
            + E   D  +  ASL K+     +F   ++K+  L  PI +++ +           +  
Sbjct: 61  HL-ERRGDETFTTASLIKVPVLVALFDLAEQKQLTLDDPIVLTEIDKVGGAGQLQFLRTP 119

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
            T+ L +   L+   S N     + + +       ++ +    + LGL  T   +    
Sbjct: 120 LTLRLWDVAWLMTTLSDNTATNLVLDRIK------IRRVWQKMEALGLPHTKVHSGSMT 172


>gi|229494573|ref|ZP_04388336.1| beta-lactamase family protein/peptidase S9 domain protein
           [Rhodococcus erythropolis SK121]
 gi|229318935|gb|EEN84793.1| beta-lactamase family protein/peptidase S9 domain protein
           [Rhodococcus erythropolis SK121]
          Length = 1122

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +++ +TG    E   D  +   S+TK+ TA +V   + E    L   
Sbjct: 708 VINADTG---VEVSTDSLFQIGSITKVWTAMLVMQLVDEGLLDLDAT 751


>gi|226304510|ref|YP_002764468.1| S9 family peptidase [Rhodococcus erythropolis PR4]
 gi|226183625|dbj|BAH31729.1| putative S9 family peptidase [Rhodococcus erythropolis PR4]
          Length = 1122

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 3/47 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +++ +TG    E   D  +   S+TK+ TA +V   + E    L   
Sbjct: 708 VINADTG---VEVSTDSLFQIGSITKVWTAMLVMQLVDEGLLDLDAT 751


>gi|54023728|ref|YP_117970.1| putative penicillin-binding protein [Nocardia farcinica IFM 10152]
 gi|54015236|dbj|BAD56606.1| putative penicillin-binding protein [Nocardia farcinica IFM 10152]
          Length = 629

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 25/79 (31%)

Query: 26  NKLPYYTLLDTNTGHVIAENYPDH----------------------PWNPASLTKLMTAY 63
            +     +LD  TG V+A    +                       P+ P S+ K++TA 
Sbjct: 283 AEGASAVVLDAKTGQVLAMANDNTFNPALGPQSWGSANTNNPSVSDPFEPGSVNKIVTAA 342

Query: 64  VVFSFLKEKKAMLTTPITI 82
               +             +
Sbjct: 343 AAIEY---GLTNPDEVHQV 358


>gi|317482118|ref|ZP_07941142.1| D-Ala-D-Ala carboxypeptidase 3 family protein [Bifidobacterium sp.
           12_1_47BFAA]
 gi|316916477|gb|EFV37875.1| D-Ala-D-Ala carboxypeptidase 3 family protein [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 496

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
              +++   G V AE+  + P  PAS  K +TA   
Sbjct: 109 ASVIIEDAQGTVAAEHESNTPREPASTLKTLTALAA 144


>gi|218245734|ref|YP_002371105.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           8801]
 gi|218166212|gb|ACK64949.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           8801]
          Length = 293

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           G  +  + PD  + PAS TKL T      
Sbjct: 89  GTTLYSHNPDKFFIPASNTKLFTTAAALQ 117


>gi|116620436|ref|YP_822592.1| beta-lactamase [Candidatus Solibacter usitatus Ellin6076]
 gi|116223598|gb|ABJ82307.1| beta-lactamase [Candidatus Solibacter usitatus Ellin6076]
          Length = 342

 Score = 38.8 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 26/89 (29%), Gaps = 13/89 (14%)

Query: 1  MRQFLVIIAMAMLSNI-----FPFLSIAETNKLPYYTLLDTNTGHVIAEN------YPDH 49
          +R   V I  A+L              A         +LD   G  +           + 
Sbjct: 3  LRALAVAILPALLCGADLDSTIAERMQALKVPAVSVAVLDG--GKPLWARGYGAGVNAET 60

Query: 50 PWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           +  ASL+K + A +      E K  L  
Sbjct: 61 VFQAASLSKHVAALIALRLADEGKLSLDE 89


>gi|257058780|ref|YP_003136668.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           8802]
 gi|256588946|gb|ACU99832.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Cyanothece sp. PCC
           8802]
          Length = 293

 Score = 38.8 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           G  +  + PD  + PAS TKL T      
Sbjct: 89  GTTLYSHNPDKFFIPASNTKLFTTAAALQ 117


>gi|166368064|ref|YP_001660337.1| D-alanyl-D-alanine carboxypeptidase [Microcystis aeruginosa
           NIES-843]
 gi|166090437|dbj|BAG05145.1| D-alanyl-D-alanine carboxypeptidase [Microcystis aeruginosa
           NIES-843]
          Length = 295

 Score = 38.8 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 6/56 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKA----MLTTPITISKN 85
           +D  T  VI  +  D  + PAS TKL T       +  +       L   + I+  
Sbjct: 86  IDRQT--VIYSHNADRYFIPASNTKLFTTAAALQVMNPETTIQKKSLRDWVNITNQ 139


>gi|162148955|ref|YP_001603416.1| peptidoglycan synthetase ftsI [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209545292|ref|YP_002277521.1| peptidoglycan glycosyltransferase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161787532|emb|CAP57128.1| putative peptidoglycan synthetase ftsI [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532969|gb|ACI52906.1| Peptidoglycan glycosyltransferase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 682

 Score = 38.8 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 27/134 (20%)

Query: 31  YTLLDTNTGHVI-------AENY------PDHPW--------NPASLTKLMTAYVVFSFL 69
             ++D NTG +I        +        PD  +         P S  KL TA +     
Sbjct: 265 AIVMDVNTGEIIAMVSLPDYDANDFGRADPDARFNRAVTGMYEPGSTFKLQTAAMAL--- 321

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND-IAVAIAESLC 128
           +   A +      S           +  K        +L  ++  S+N   A    +   
Sbjct: 322 QMGVAHIWDR--FSTIPIHIGRFTISDMKTDHFAPWLSLPGVMAFSSNPAAAHIALDVGA 379

Query: 129 KTEKKFVQHMNNTS 142
           + ++ +++ M   S
Sbjct: 380 QRQQDWLRKMGFFS 393


>gi|229815602|ref|ZP_04445929.1| hypothetical protein COLINT_02653 [Collinsella intestinalis DSM
          13280]
 gi|229808832|gb|EEP44607.1| hypothetical protein COLINT_02653 [Collinsella intestinalis DSM
          13280]
          Length = 266

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 1/29 (3%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTK 58
           Y +L+   G  I E+  D  +  AS  K
Sbjct: 60 SYIVLNLENGQTI-EHNADRAYYSASTIK 87


>gi|171778207|ref|ZP_02919436.1| hypothetical protein STRINF_00275 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283031|gb|EDT48455.1| hypothetical protein STRINF_00275 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 17/40 (42%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
            PD     AS+ KL T Y V   +++    +   +  + +
Sbjct: 222 NPDTTMYAASVAKLATLYYVEEKIQDGSVKMDDKLKYTAD 261


>gi|50913356|ref|YP_059328.1| Beta-lactamase [Streptococcus pyogenes MGAS10394]
 gi|50902430|gb|AAT86145.1| Beta-lactamase [Streptococcus pyogenes MGAS10394]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYTKDVNHFYGDYDPLGSGKISKIA 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSNYEDITAIA 420


>gi|254387583|ref|ZP_05002822.1| secreted penicillin binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294815031|ref|ZP_06773674.1| Secreted penicillin binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326443398|ref|ZP_08218132.1| cell division protein FtsI/penicillin-binding protein 2-like
           protein [Streptomyces clavuligerus ATCC 27064]
 gi|1666696|gb|AAC44561.1| PcbR [Streptomyces clavuligerus ATCC 27064]
 gi|197701309|gb|EDY47121.1| secreted penicillin binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327630|gb|EFG09273.1| Secreted penicillin binding protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 551

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 39/150 (26%), Gaps = 17/150 (11%)

Query: 17  FPFLSIAETNKLPYYTL-LDTNTGHVIAENYP--------DHPWNPASLTKLMTAYVVFS 67
               +  E +K     + +D  TG+++A            +  + P S  K++T   +  
Sbjct: 260 SAAAAALEGSKKNAAIVAVDPATGNILAAANVPSGMNRALEGRYPPGSTFKVVTTAALLQ 319

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                +             +     +   +   T+   +  +     S N        S 
Sbjct: 320 QGMNPEERAD-----CPKFAHVNGQSFENQDQFTLPAGSTFRDSFAHSCN---TFFVNSR 371

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
            K  +  ++         G          G
Sbjct: 372 SKLSESSLKQAAEAFGIGGTWDVGASTFDG 401


>gi|319645533|ref|ZP_07999765.1| DacC protein [Bacillus sp. BT1B_CT2]
 gi|317392419|gb|EFV73214.1| DacC protein [Bacillus sp. BT1B_CT2]
          Length = 567

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             +G +I  +  D    PAS  KL+TA   +
Sbjct: 310 AESGKMIYGHMGDTRMRPASNLKLLTAAAAY 340


>gi|291571479|dbj|BAI93751.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 449

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           P +PASL K+  A  +     E++      I +         S+   +   + +L   + 
Sbjct: 230 PASPASLIKVPVAIALLHKAAEEQVSFDKEIYVEGGNFTEDASS--IRARKSYSLQMLMA 287

Query: 110 LLIVKSANDIAVAIAES-LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
            +I  S+N     + +        K ++        +                G  +   
Sbjct: 288 QMIDHSSNIATNQLIDYLGSDYINKLLERHGYKQTRVQFKLMGDRIMPFRPGRGRNSMTS 347

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNI 228
           D          ++        I+ L  +  +        G      G KTG         
Sbjct: 348 DELTEMMVEIYNYEHPHSELLIEALSHQYDREIGYQALEGLKAQWLGEKTGQNSRVIGTT 407

Query: 229 VASAIQGDQSLIAVILGALD 248
           +A++I G++ +I +   +  
Sbjct: 408 LAASIDGERYIITITDNSAG 427


>gi|307263611|ref|ZP_07545225.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|306871074|gb|EFN02804.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 480

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            +  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 ILIPSISFAEINTSGLLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|298246520|ref|ZP_06970326.1| glycosyl transferase family 51 [Ktedonobacter racemifer DSM 44963]
 gi|297554001|gb|EFH87866.1| glycosyl transferase family 51 [Ktedonobacter racemifer DSM 44963]
          Length = 938

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 39/168 (23%), Gaps = 21/168 (12%)

Query: 25  TNKLPYYTLLDTNTGHVI-------AENY----------PDHPWNPASLTKLMTAYVVFS 67
                   ++D  TG ++        E               P  P S  K +     F 
Sbjct: 497 NVNNASVVVMDPKTGEILAMNGSASYEANYPQVRGQLNGATTPRQPGSSFKPIVYATAFE 556

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
                  +++   TI             +           ++  +  S N  A+      
Sbjct: 557 MGWYPAMIVSDHRTIYPVDPPDYYHPQNYDGNFHSDYPMTVRTALANSFNIPAIDAIMFT 616

Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG----HYTTARDMA 171
                + +      S+ + L  +    +  +        H T A    
Sbjct: 617 GVHNVQNMAARLGISEVVNLPDSQTGPSMALGSKEVSLLHMTDAYATF 664


>gi|190150272|ref|YP_001968797.1| penicillin-binding protein 4 precursor [Actinobacillus
          pleuropneumoniae serovar 7 str. AP76]
 gi|189915403|gb|ACE61655.1| penicillin-binding protein 4 precursor [Actinobacillus
          pleuropneumoniae serovar 7 str. AP76]
          Length = 480

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTA 62
            +  I+ A ++      ++        +   +  T  +I +   D    PAS  K+ TA
Sbjct: 18 ILIPSISFAEINTSGLLTNLPAGASA-SFIAKNLETNQIITQYQSDVFMLPASTQKVFTA 76

Query: 63 YVV 65
             
Sbjct: 77 LAA 79


>gi|116073106|ref|ZP_01470368.1| putative beta-lactamase [Synechococcus sp. RS9916]
 gi|116068411|gb|EAU74163.1| putative beta-lactamase [Synechococcus sp. RS9916]
          Length = 377

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 41/152 (26%), Gaps = 2/152 (1%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             +     K+  + L+  + G   AE   D     AS  K          L         
Sbjct: 107 LAAQQADLKVSAFMLV-LDDGR-YAELGADTALPAASSIKTPILLAALERLDAGDLHWNE 164

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
           P+T++K            K   T      +   +++ +++ A  +       ++      
Sbjct: 165 PLTMTKPLVGGGAGWMANKPVGTRFPTYEVATEMIRISDNTATNLMIERAGGKQAVNIRF 224

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           N    +         +  G         AR +
Sbjct: 225 NTLGLSATKINNWLPDLKGTNTTSARDLARAI 256


>gi|311030864|ref|ZP_07708954.1| hypothetical protein Bm3-1_10016 [Bacillus sp. m3-13]
          Length = 275

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 6/229 (2%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            ++ ++       +++   G  + +         ASL K+      F  ++     L+  
Sbjct: 16  QAVVDSTAGHVSYVIEDGGGQRL-DKDAYVTKKAASLIKIPIMMAAFKQVEAGILSLSDR 74

Query: 80  ITI-SKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL-CKTEKKFVQH 137
            +I ++N              ++ TL   L L+I+ S N     + + +       F + 
Sbjct: 75  YSIDTRNIVSGAGVIQFMDGDTSFTLGELLTLMIIVSDNTATNKVIDIIGWNGVNDFCRE 134

Query: 138 MNNTSKNLGLSATHF-MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
              T+  L      F   A G+          +          +   +    + K L I 
Sbjct: 135 QGLTNTKLERKMMDFKATAAGIENRTSALEMIECLKYLHIEDAERAVFSDESRQKMLRIL 194

Query: 197 GKKYPNTNWAVGTFLGADG--MKTGFTCASGFNIVASAIQGDQSLIAVI 243
           G +           L   G   KTG       +      +G++  +AV+
Sbjct: 195 GGQQLLDKLPFYMDLELVGIANKTGELPGVEHDCGIVTYKGEKLFVAVL 243


>gi|300727793|ref|ZP_07061175.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella bryantii B14]
 gi|299774946|gb|EFI71556.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella bryantii B14]
          Length = 426

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/258 (9%), Positives = 57/258 (22%), Gaps = 25/258 (9%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF-LKEKKAMLTTPITISKNASEYP 90
            + D      I ++       PAS  K++TA           +       T + +     
Sbjct: 83  MVWDLTADSCIYKHNERQLLRPASTMKVITAIAAIDRLGGSFQFKTQLKYTGTIDNHCLN 142

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                         ++ +K ++          I   +       ++  N   +       
Sbjct: 143 GDLYCVGGMDPRFNNDDMKAMVSSLREMGIDTIRGHIYADVS--LKDSNKFGEGWCWDDD 200

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY---------FQIKGLEIKGKKYP 201
           + +    ++        R M+ +                          +   I      
Sbjct: 201 NPVLTPLLLGRKDQFMDRFMSKIHEDSIVCSYYTYSNKTCPSEAYTISTRSHSIDQILMR 260

Query: 202 NTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS----- 256
               +   +      +   +  +      SA   ++ L+  +     R      S     
Sbjct: 261 MLKESDNLYAECLFYQMAASTGNRPASAKSARWVEKKLVQKVGLDPSRYKFADGSGLSLY 320

Query: 257 --------ASLLSMGFYN 266
                     LL   F N
Sbjct: 321 NYVSAELEIKLLRYAFNN 338


>gi|315504842|ref|YP_004083729.1| beta-lactamase [Micromonospora sp. L5]
 gi|315411461|gb|ADU09578.1| beta-lactamase [Micromonospora sp. L5]
          Length = 436

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK MTA +V       +  L  P
Sbjct: 50 DGDLQYRVGSITKTMTAVLVMQQRDAGRVALDDP 83


>gi|253582678|ref|ZP_04859899.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium varium ATCC
          27725]
 gi|251835548|gb|EES64088.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium varium ATCC
          27725]
          Length = 475

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          ++D  TG V+A++  +    PAS+ K++T+     
Sbjct: 54 VVDLKTGKVVADHRGEKALVPASVMKVVTSGAALE 88


>gi|154249975|ref|YP_001410800.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Fervidobacterium nodosum Rt17-B1]
 gi|154153911|gb|ABS61143.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Fervidobacterium nodosum Rt17-B1]
          Length = 395

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 20 LSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           S A  +        D   G+V+ +    + + PAS+TK+ +  V + 
Sbjct: 31 SSKAPLSSYVGVYFQDIENGNVLVQYNEHNLYVPASITKIFSTLVAWE 78


>gi|52785884|ref|YP_091713.1| hypothetical protein BLi02133 [Bacillus licheniformis ATCC 14580]
 gi|52348386|gb|AAU41020.1| DacC [Bacillus licheniformis ATCC 14580]
          Length = 742

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             +G +I  +  D    PAS  KL+TA   +
Sbjct: 313 AESGKMIYGHMGDTRMRPASNLKLLTAAAAY 343


>gi|120406856|ref|YP_956685.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1]
 gi|119959674|gb|ABM16679.1| beta-lactamase [Mycobacterium vanbaalenii PYR-1]
          Length = 310

 Score = 38.4 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 3/116 (2%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTA--YVVFSFLKEKKAMLTTPITISKNASEY 89
            +LD NTG +I  N  + P+  AS+ KL  A   ++     + +       ++       
Sbjct: 91  VVLDRNTGQII-SNGANKPFPIASVVKLFIADDLLLQESEGKTQLSAADRKSLDVMLRSS 149

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
             S +      +       +++                  T       +      L
Sbjct: 150 DDSAAQIFWDRSGQNAVIARVVARYGLTGTTAPHNGHWDVTTSTASDLVRYYDMLL 205


>gi|302533957|ref|ZP_07286299.1| stage V sporulation protein D [Streptomyces sp. C]
 gi|302442852|gb|EFL14668.1| stage V sporulation protein D [Streptomyces sp. C]
          Length = 606

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 47/167 (28%), Gaps = 31/167 (18%)

Query: 17  FPFLSIAETNKLPYY-----TLLDTNTGHVIAENYP---------------------DHP 50
               +IAE  +          + DT TG V+A                            
Sbjct: 232 AAQSAIAEQVEKSGADRGYVIVQDTRTGEVLAMANAPGFDPNDLTRARSTAMGNAALQDV 291

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           + P S  K+M+   V    K   A   T + +                    T    L  
Sbjct: 292 YEPGSTAKVMSMAAVLEEKK---ARPDTRVEVPNRLH--RGDRLFKDDVDHPTWYLTLNG 346

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           ++ KS+N   +     L  ++ +  + + +     G+     +N  G
Sbjct: 347 VLAKSSNIGTILATGQLGASQSEANKVLYSYLDKFGIGRPTGLNYPG 393


>gi|320160619|ref|YP_004173843.1| hypothetical protein ANT_12090 [Anaerolinea thermophila UNI-1]
 gi|319994472|dbj|BAJ63243.1| hypothetical protein ANT_12090 [Anaerolinea thermophila UNI-1]
          Length = 325

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+ E   D   +PAS+ K+    +V   L++       
Sbjct: 99  GRVLFEWRSDEIIHPASIVKVPLGMLVLETLEKGTEEPLD 138


>gi|281422788|ref|ZP_06253787.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella copri DSM 18205]
 gi|281403156|gb|EFB33836.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella copri DSM 18205]
          Length = 426

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 13/37 (35%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + D +    I +        PAS  KL+TA      
Sbjct: 84  MVWDLSADSCIYQRNERQLMRPASTMKLLTAITALDK 120


>gi|320531612|ref|ZP_08032555.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320136189|gb|EFW28194.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 465

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +++D  TG  + +        PAS  K++TA+   S +    
Sbjct: 93  TASVIDVATGEELLDRSAATGVTPASTNKVLTAWAALSSMGPGH 136


>gi|237749502|ref|ZP_04579982.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes
          OXCC13]
 gi|229380864|gb|EEO30955.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes
          OXCC13]
          Length = 473

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/84 (13%), Positives = 25/84 (29%), Gaps = 17/84 (20%)

Query: 1  MRQFLVI----IAMAMLSNIFPFLSIAETNKLPY------------YTLLD-TNTGHVIA 43
          MR+         +        P  +    + + Y              +++  ++     
Sbjct: 1  MRKLSTFCRKWFSGLFFILALPVFAQQLPSSVKYELELAGIPENSVGIVVEQVDSNVSRL 60

Query: 44 ENYPDHPWNPASLTKLMTAYVVFS 67
           +  D  + PAS  K++T Y    
Sbjct: 61 THNADIAFAPASTMKVLTTYAALE 84


>gi|254442477|ref|ZP_05055953.1| Penicillin binding protein transpeptidase domain, putative
          [Verrucomicrobiae bacterium DG1235]
 gi|198256785|gb|EDY81093.1| Penicillin binding protein transpeptidase domain, putative
          [Verrucomicrobiae bacterium DG1235]
          Length = 269

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 15/80 (18%)

Query: 3  QFLVIIAMAMLSNIFPFLSIAETNKLPYY-------------TLLDTNTGHVIAENYP-- 47
          + ++ +A ++   +   L+     + P                L D  T        P  
Sbjct: 6  RLILSLAASLYGLLTASLAQPNPVEFPPATEAILASGFDGTLCLYDLKTQTYRTNRNPSI 65

Query: 48 DHPWNPASLTKLMTAYVVFS 67
          D P  PAS  K+ ++ V   
Sbjct: 66 DTPRIPASTFKIFSSLVALE 85


>gi|307327057|ref|ZP_07606247.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces violaceusniger Tu 4113]
 gi|306887355|gb|EFN18351.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Streptomyces violaceusniger Tu 4113]
          Length = 532

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 19/59 (32%)

Query: 10  MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             +   + P L  +         ++D  TG  +  +       PAS  KL T     S 
Sbjct: 143 AGLADTLEPLLEDSALADERSVAVMDVTTGQQVFGSKAGTATVPASTIKLATGAAALSA 201


>gi|148359153|ref|YP_001250360.1| beta-lactamase AmpS [Legionella pneumophila str. Corby]
 gi|148280926|gb|ABQ55014.1| beta-lactamase AmpS [Legionella pneumophila str. Corby]
          Length = 266

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 49/203 (24%), Gaps = 11/203 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI--AENYPDHPWNPASLTK 58
           M++ ++ +   +L  +    +                   V+    N  D  ++PAS  K
Sbjct: 1   MKKIIIFLCTGLLFCV-STWAQGTCFLAK-------ENQTVLKREGNDCDQRYSPASTFK 52

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +  + + F     K   L       K    Y       +   T   D+ +      +   
Sbjct: 53  IALSLMGFDSGILKD-ELHPEWPYKKEYELYLNVWKYPQNPHTWIRDSCVWYSQALTRQL 111

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
                   +            +  +N GL+     ++  +         + +      + 
Sbjct: 112 GMKRFKGYVDAFHYGNQDVSGDKGQNNGLTHAWLSSSLSISPTEQIQFLQKIIYKKLPVS 171

Query: 179 TDFPQYMHYFQIKGLEIKGKKYP 201
                             G K  
Sbjct: 172 QKAYTMTKNIMYIQELPGGWKLY 194


>gi|294674657|ref|YP_003575273.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella ruminicola 23]
 gi|294473329|gb|ADE82718.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella ruminicola 23]
          Length = 409

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 11/37 (29%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + D      +          PAS  KL+TA      
Sbjct: 69  MVYDITADSTLYTYGAKQILRPASTMKLLTAITALDQ 105


>gi|254369285|ref|ZP_04985297.1| beta-lactamase class A [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122235|gb|EDO66375.1| beta-lactamase class A [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 294

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 52/212 (24%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +      TM
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQTM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFILSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N            G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILDKKHRLMFKQWLIASNTSNNHIAVEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|89256306|ref|YP_513668.1| Beta-lactamase class A [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314753|ref|YP_763476.1| beta-lactamase [Francisella tularensis subsp. holarctica OSU18]
 gi|156502375|ref|YP_001428440.1| beta-lactamase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010179|ref|ZP_02275110.1| beta-lactamase [Francisella tularensis subsp. holarctica FSC200]
 gi|254367639|ref|ZP_04983660.1| beta-lactamase class A [Francisella tularensis subsp. holarctica
           257]
 gi|290953140|ref|ZP_06557761.1| beta-lactamase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313668|ref|ZP_06804252.1| beta-lactamase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89144137|emb|CAJ79396.1| Beta-lactamase class A [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129652|gb|ABI82839.1| beta-lactamase [Francisella tularensis subsp. holarctica OSU18]
 gi|134253450|gb|EBA52544.1| beta-lactamase class A [Francisella tularensis subsp. holarctica
           257]
 gi|156252978|gb|ABU61484.1| beta-lactamase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 294

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 53/212 (25%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +      TM
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQTM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFILSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N   A        G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILDKKHRLMFKQWLIASNTSNNHIAAEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|307245857|ref|ZP_07527942.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|307254830|ref|ZP_07536656.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 9 str.
          CVJ13261]
 gi|307259272|ref|ZP_07541001.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306853217|gb|EFM85437.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306862201|gb|EFM94169.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 9 str.
          CVJ13261]
 gi|306866639|gb|EFM98498.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
          Length = 480

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 5  LVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
          L++ ++ + S  F  ++ +             +   +  T  +I +   D    PAS  K
Sbjct: 13 LLLTSILIPSISFAEINTSELLTNLPAGASASFIAKNLETNQIITQYQSDVFMLPASTQK 72

Query: 59 LMTAYVV 65
          + TA   
Sbjct: 73 VFTALAA 79


>gi|295110945|emb|CBL27695.1| Beta-lactamase class A [Synergistetes bacterium SGP1]
          Length = 280

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 70/236 (29%), Gaps = 28/236 (11%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI-SKNASEYPPSNST 95
            +G V  E  P+     AS+ KL    +    + E +        I S N          
Sbjct: 33  ESGEV-VEINPNRALCSASIIKLPILALALKDVGEGRLDWKKTYQIASANRVGGTGVLRE 91

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT----- 150
             +    +L+    L+I  S N  A  + + +       +  +    ++LG + T     
Sbjct: 92  LDEIREASLEKLAFLMIALSDNIAANQVIDLIS------MDRITPFCRSLGYTNTRCERK 145

Query: 151 ---HFMNAHGVVQHGHYTTA-RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWA 206
                    G   +     A R ++ ++     +         I   ++   K P    A
Sbjct: 146 QLDMQAIREGRNNYTSAGDAGRMLSAVARGELVNPVASRLIHSIMSRQMCRNKLPAKIPA 205

Query: 207 VGTFLGADGM-----------KTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251
           +  +   DGM           KTG       +     +   +  +  +L    ++ 
Sbjct: 206 IAYWAVQDGMTLPAGSVLAANKTGELLDVQHDAGIFTLPDGRRYVIAMLTGEVKDA 261


>gi|294676357|ref|YP_003576972.1| peptidoglycan glycosyltransferase [Rhodobacter capsulatus SB 1003]
 gi|294475177|gb|ADE84565.1| peptidoglycan glycosyltransferase [Rhodobacter capsulatus SB 1003]
          Length = 645

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 35/133 (26%), Gaps = 5/133 (3%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           I+A+A   +  P L +   +   Y  L++ +    +A+      + P S  KL+T     
Sbjct: 285 IMAIASAPSFDPNLFVRGISGADYTALMEND-HRPLADKTVQGVYPPGSTFKLVTLLAAL 343

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                        +                 K S     NA+  L               
Sbjct: 344 EA---GVISPEETVYC-PGYMTVGGRRFGCWKHSGHGRVNAVYSLEQSCDTYYYEVSQRV 399

Query: 127 LCKTEKKFVQHMN 139
             +      + + 
Sbjct: 400 GIEAIAAMARRLG 412


>gi|111018216|ref|YP_701188.1| beta lactamase [Rhodococcus jostii RHA1]
 gi|110817746|gb|ABG93030.1| possible beta lactamase [Rhodococcus jostii RHA1]
          Length = 272

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNP-ASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  +L  + G VI E        P AS+TKL+ AY V    +E    L  P
Sbjct: 11 PVDNAAAVVLSYDEG-VIGEYGDQQRVFPLASVTKLLCAYAVLVATEEGAVELDQP 65


>gi|19704905|ref|NP_602400.1| Beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19712798|gb|AAL93699.1| Beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 264

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 66/208 (31%), Gaps = 13/208 (6%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-YPPSNSTFKKGST 101
                +     AS+ KL+    +   + E K  L+  ITI+                G  
Sbjct: 35  FSINGNEKVLSASMIKLLILAELMKKVSENKFSLSDTITITNFMKTGGDGVLKELNAGHH 94

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ- 160
            TL     L+I+ S N     + + L       ++++N   K LGL  T         + 
Sbjct: 95  FTLKELATLMIIVSDNQATNILIDFL------GMENINFLGKELGLRETFLERRMMDAEA 148

Query: 161 ----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGM 216
               + +YT+A D+++L   +               L+I  ++                 
Sbjct: 149 SKNGYDNYTSADDISLLLK-LIYQEKLINKETSQLMLDILLRQQQGERLQRYLPPDIKIA 207

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVIL 244
                  +  N       G++  I V+L
Sbjct: 208 HKCGDLDNLENDGGIIWLGNKIYILVVL 235


>gi|332523375|ref|ZP_08399627.1| penicillin-binding protein 2X [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314639|gb|EGJ27624.1| penicillin-binding protein 2X [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 750

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/135 (8%), Positives = 31/135 (22%), Gaps = 26/135 (19%)

Query: 30  YYTLLDTNTGHVIA-----ENYPDHP------------------WNPASLTKLMTAYVVF 66
             TL++  TG ++A         D                    + P S  K+MT     
Sbjct: 291 SATLVNAKTGEILATSQRPSYNADTLEGLNNKKYNWKSALYQNNFEPGSTMKVMTLAAAI 350

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                         + +        +   +     ++    +      + +         
Sbjct: 351 DE---GVFKPNDVYSNANGLKIADATIQDWSINEGISTGQYMTYAQGFAYSSNVGMTKLE 407

Query: 127 LCKTEKKFVQHMNNT 141
                K ++ ++   
Sbjct: 408 QKMGNKTWLDYLTKF 422


>gi|154183792|gb|ABS70736.1| GES-7 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 271

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 36  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 94

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 95  ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 149

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 150 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 209

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 210 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 248


>gi|154183790|gb|ABS70735.1| GES-7 extended-spectrum beta-lactamase [Klebsiella pneumoniae]
          Length = 265

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 31  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 89

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 90  ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 144

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 145 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 204

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 205 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 243


>gi|30023947|gb|AAF28763.2|AF208529_1 class A beta-lactamase [Enterobacter cloacae]
 gi|30350252|gb|AAP22974.1| IBC-1 beta lactamase [Escherichia coli]
 gi|316994928|gb|ADU79013.1| extended-spectrum beta-lactamase GES-7/IBC-1 [Aeromonas veronii]
          Length = 287

 Score = 38.4 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|309388987|gb|ADO76867.1| Peptidoglycan glycosyltransferase [Halanaerobium praevalens DSM
           2228]
          Length = 689

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 22/84 (26%)

Query: 30  YYTLLDTNTGHVIA----------------ENY-----PDHPWNPASLTKLMTAYVVFSF 68
              ++D++TG V+A                E        +  + PAS  K++TA      
Sbjct: 244 SVIVMDSSTGDVLALANTPSYNPNKFGKYSEKNWRNRAVNDVFEPASTFKIITAASALEE 303

Query: 69  -LKEKKAMLTTPITISKNASEYPP 91
            +  +  +LT P  I     +   
Sbjct: 304 GVITENDILTDPGHIYVENQKINC 327


>gi|307610318|emb|CBW99885.1| hypothetical protein LPW_16431 [Legionella pneumophila 130b]
          Length = 266

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 49/203 (24%), Gaps = 11/203 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI--AENYPDHPWNPASLTK 58
           M++ ++ +   +L  +    +                   V+    N  D  ++PAS  K
Sbjct: 1   MKKIIIFLCTGLLFCV-STWAQGTCFLAK-------ENQTVLKREGNDCDQRYSPASTFK 52

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +  + + F     K   L       K    Y       +   T   D+ +      +   
Sbjct: 53  IALSLMGFDSGILKD-ELHPEWPYKKEYELYLNVWKYPQNPHTWIRDSCVWYSQALTRQL 111

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
                   +            +  +N GL+     ++  +         + +      + 
Sbjct: 112 GMKRFKGYVDAFHYGNQDVSGDRGQNNGLTNAWLSSSLSISPAEQIQFLQKIIYKKLPVS 171

Query: 179 TDFPQYMHYFQIKGLEIKGKKYP 201
                             G K  
Sbjct: 172 QKAYTMTKNIMYIQELPGGWKLY 194


>gi|284928707|ref|YP_003421229.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [cyanobacterium UCYN-A]
 gi|284809166|gb|ADB94871.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
           [cyanobacterium UCYN-A]
          Length = 294

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 5/58 (8%)

Query: 32  TLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS----FLKEKKAMLTTPITISK 84
            L++    G V+  + PD  + PAS  K+ T            K     L + + I+ 
Sbjct: 81  ILVEKLEDGTVLYSHNPDKYFIPASNNKIFTTAAALQLFNPKSKIGSKTLESWVNITN 138


>gi|325990179|gb|ADZ48685.1| extended-spectrum beta-lactamase GES-17 [Escherichia coli]
          Length = 287

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 53/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG       N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGARNDIGFFKAQERDYAVAV 255


>gi|317508073|ref|ZP_07965758.1| beta-lactamase [Segniliparus rugosus ATCC BAA-974]
 gi|316253641|gb|EFV13026.1| beta-lactamase [Segniliparus rugosus ATCC BAA-974]
          Length = 388

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 65/233 (27%), Gaps = 8/233 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT--TPITISKNAS 87
              +LDT +G  + E+  D  +   S  K + A  V    +++  +L    P+     A 
Sbjct: 142 GVFVLDTGSGKTL-EHRADQRFMMCSTFKALLAGAVLRKAQDEPGLLDRSIPVPAEAAAG 200

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNL 145
                    + G + TL    +  I  S N  A  + +          F + +++T   L
Sbjct: 201 AGYAPFGNSRLGKSATLAELCEASIQISDNIAANLLIDFLGGPPAVTSFFRSLDDTVTRL 260

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
                   +          T       L      +        Q+    +          
Sbjct: 261 DRHEEAMSDGEAKDLLDTTTPRAIAKTLHKLALGEALAKPQRQQLVDWMLGSVTGTECIR 320

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQS---LIAVILGALDRNTRNKV 255
           A          KTG       + +A            +A++    ++  RN  
Sbjct: 321 AGLPSEWKVADKTGTGARGERHDIAIVWPTGGKAPLAVAILTRVQNKAERNDQ 373


>gi|307261433|ref|ZP_07543106.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306868890|gb|EFN00694.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
          Length = 480

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 5  LVIIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
          L++ ++ + S  F  ++ +             +   +  T  +I +   D    PAS  K
Sbjct: 13 LLLTSILIPSISFAEINTSELLTNLPAGASASFIAKNLETNQIITQYQSDVFMLPASTQK 72

Query: 59 LMTAYVV 65
          + TA   
Sbjct: 73 VFTALAA 79


>gi|221309773|ref|ZP_03591620.1| beta-lactamase precursor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314095|ref|ZP_03595900.1| beta-lactamase precursor [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319017|ref|ZP_03600311.1| beta-lactamase precursor [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323291|ref|ZP_03604585.1| beta-lactamase precursor [Bacillus subtilis subsp. subtilis str.
           SMY]
          Length = 304

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 5/211 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +   IA   P+  +  AS  K++ A  V      +   L   I  SK+        
Sbjct: 67  IDIGSNKTIAYR-PNERFAYASTYKVLAAAAVLKKNSIE--KLNEVIHYSKDDLVTYSPI 123

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M+L    +  I  S N     + +     K  +K ++ + +         T 
Sbjct: 124 TEKHLDTGMSLKEISEAAIRYSDNTAGNILLQQLGGPKGFEKSLKQIGDHVTKAKRFETD 183

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
             +A         T       L      +         +               A     
Sbjct: 184 LNSAIPGDIRDTSTAKALATDLKAFTLDNTLTTDKRMILTDWMRGNATGDELIRAGAPIG 243

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              G K+G       N +A     +++ I V
Sbjct: 244 WEVGDKSGAGSYGTRNDIAIVWPPNRAPIVV 274


>gi|111017199|ref|YP_700171.1| beta-lactamase, penicillin binding protein [Rhodococcus jostii
           RHA1]
 gi|110816729|gb|ABG92013.1| beta-lactamase, penicillin binding protein [Rhodococcus jostii
           RHA1]
          Length = 317

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 53/214 (24%), Gaps = 4/214 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++  TG V   +  D  +   S  K   +  V    ++    L   + I           
Sbjct: 74  VNPATGEV-YSHRGDERFAMCSTFKAYASAAVLRKTEDGSTSLDKTVVIEPGDLVENSPV 132

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATH 151
           +    G+ MTL    +  + +S N     +   +   +      + + +    L    T 
Sbjct: 133 TAAAVGAPMTLGQIAEAALTQSDNTAGNYLLREIGGPQAITALARDVGDGGTRLDRWETE 192

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T           +  D        Q+       K       A     
Sbjct: 193 LNTAFRDDPRDTTTPNGLAQGFRALLLGDALDTASRDQLLEWMRASKTSDKRMRAGLPTG 252

Query: 212 GADGMKTGFTCASGFNIVASAIQ-GDQSLIAVIL 244
                KTG       N    A       L+  IL
Sbjct: 253 WTAADKTGGGGFGTANDAGVAWSPDGAPLVLAIL 286


>gi|94989519|ref|YP_597619.1| Beta-lactamase [Streptococcus pyogenes MGAS10270]
 gi|94543027|gb|ABF33075.1| Beta-lactamase [Streptococcus pyogenes MGAS10270]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYTKDVNHFYGDYDPLGSGKISKIA 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|303241281|ref|ZP_07327787.1| beta-lactamase [Acetivibrio cellulolyticus CD2]
 gi|302591198|gb|EFL60940.1| beta-lactamase [Acetivibrio cellulolyticus CD2]
          Length = 513

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 4/41 (9%)

Query: 43  AENY----PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            EN     P+  +  AS+TK  TA  +    +  K  L   
Sbjct: 113 YENNIPNMPNTRFAIASMTKQFTAMAILQLYENGKLNLDDK 153


>gi|255950998|ref|XP_002566266.1| Pc22g23750 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593283|emb|CAP99663.1| Pc22g23750 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 3061

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 48   DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            D  +  ASLTKLMT   +   ++  +  L  
Sbjct: 2724 DAVYGMASLTKLMTTIAIMICVERGQISLDD 2754


>gi|6685151|gb|AAF23816.1|AF217648_1 beta-lactamase [Vibrio harveyi]
          Length = 290

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 4/213 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + DT T     +   D  +   S  K +    + S +  +K        + +        
Sbjct: 41  VWDTQTDE-HWDYRGDERFPMMSTFKTLACATMLSDMDNEKLDKNATAKVEERNMVVWSP 99

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKK---FVQHMNNTSKNLGLSA 149
                 G T   ++A +  ++ S N  A  +  S+         F++ + + +  L    
Sbjct: 100 VMDRMAGQTTRFEHACEAAMLMSDNSAAHIVLRSIWGVHAGGTSFLRSIGDKATRLDRFE 159

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                A+   +    T    +  L   ++ D   Y    Q+K      K   +   +V  
Sbjct: 160 PRLNEANPGDKRDTTTPNAMVNTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLP 219

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              +   ++G        I A   + +   + +
Sbjct: 220 KGWSIADRSGAGGFGSRGITAMIWKENHKPVYI 252


>gi|320547723|ref|ZP_08042008.1| beta-lactamase [Streptococcus equinus ATCC 9812]
 gi|320447798|gb|EFW88556.1| beta-lactamase [Streptococcus equinus ATCC 9812]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 16/40 (40%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
             D     AS+ KL T Y V   +++    +   +  + +
Sbjct: 222 NSDTTMYAASIAKLATLYYVEEKIQDGSVKMDDKLRYTAD 261


>gi|19745209|ref|NP_606345.1| hypothetical protein spyM18_0011 [Streptococcus pyogenes MGAS8232]
 gi|71902677|ref|YP_279480.1| hypothetical protein M28_Spy0010 [Streptococcus pyogenes MGAS6180]
 gi|94987641|ref|YP_595742.1| beta-lactamase [Streptococcus pyogenes MGAS9429]
 gi|94991507|ref|YP_599606.1| Beta-lactamase [Streptococcus pyogenes MGAS2096]
 gi|139472898|ref|YP_001127613.1| hypothetical protein SpyM50010 [Streptococcus pyogenes str.
           Manfredo]
 gi|306826401|ref|ZP_07459715.1| beta-lactamase [Streptococcus pyogenes ATCC 10782]
 gi|19747298|gb|AAL96844.1| hypothetical protein spyM18_0011 [Streptococcus pyogenes MGAS8232]
 gi|71801772|gb|AAX71125.1| conserved hypothetical protein [Streptococcus pyogenes MGAS6180]
 gi|94541149|gb|ABF31198.1| beta-lactamase [Streptococcus pyogenes MGAS9429]
 gi|94545015|gb|ABF35062.1| Beta-lactamase [Streptococcus pyogenes MGAS2096]
 gi|134271144|emb|CAM29354.1| putative exported protein [Streptococcus pyogenes str. Manfredo]
 gi|304431396|gb|EFM34391.1| beta-lactamase [Streptococcus pyogenes ATCC 10782]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYTKDVNHFYGDYDPLGSGKISKIA 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|307610862|emb|CBX00477.1| hypothetical protein LPW_21951 [Legionella pneumophila 130b]
          Length = 718

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +  +  ASL+K++  Y+V  + KE K  L  P
Sbjct: 51 DANTRFPAASLSKIVFTYLVLQWTKENKIDLDEP 84


>gi|229100618|ref|ZP_04231468.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|228682798|gb|EEL36826.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 367

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 8/125 (6%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS-- 94
               ++     D     AS+ KL+ A                 I++S+    Y  +    
Sbjct: 55  KNDEILCSINEDKRLPLASMVKLIIAIEFAKQSANGIINENEYISLSELKKYYIKNTDGG 114

Query: 95  -TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF-----VQHMNNTSKNLGLS 148
              K    M  +N +K   V   N     +  S     +       ++++N   K LGL 
Sbjct: 115 AHPKWEQDMIQNNQIKNDCVTLQNIARGMLQYSSNANTEYLINILGIENINQNIKELGLK 174

Query: 149 ATHFM 153
               +
Sbjct: 175 HHEEV 179


>gi|50954004|ref|YP_061292.1| beta-lactamase related protein [Leifsonia xyli subsp. xyli str.
          CTCB07]
 gi|50950486|gb|AAT88187.1| beta-lactamase related protein [Leifsonia xyli subsp. xyli str.
          CTCB07]
          Length = 278

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 17/43 (39%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAM 75
          + D +TG V+           AS+ K++    V + L+     
Sbjct: 28 VTDLSTGEVLFSVDDHVVMPTASIGKVLLLVEVAARLQSGGLS 70


>gi|290766002|gb|ADD59981.1| CTX-M-15 beta-lactamase [Escherichia coli]
          Length = 107

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 17/97 (17%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             D  +   S +K+M A  V    + +  +L   + I
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEI 100


>gi|16078940|ref|NP_389761.1| beta-lactamase precursor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|7676151|sp|P39824|BLAC_BACSU RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|2619002|gb|AAB84426.1| penicillinase [Bacillus subtilis]
 gi|2634273|emb|CAB13772.1| beta-lactamase precursor [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 306

 Score = 38.4 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 5/211 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +   IA   P+  +  AS  K++ A  V      +   L   I  SK+        
Sbjct: 69  IDIGSNKTIAYR-PNERFAYASTYKVLAAAAVLKKNSIE--KLNEVIHYSKDDLVTYSPI 125

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M+L    +  I  S N     + +     K  +K ++ + +         T 
Sbjct: 126 TEKHLDTGMSLKEISEAAIRYSDNTAGNILLQQLGGPKGFEKSLKQIGDHVTKAKRFETD 185

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
             +A         T       L      +         +               A     
Sbjct: 186 LNSAIPGDIRDTSTAKALATDLKAFTLDNTLTTDKRMILTDWMRGNATGDELIRAGAPIG 245

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
              G K+G       N +A     +++ I V
Sbjct: 246 WEVGDKSGAGSYGTRNDIAIVWPPNRAPIVV 276


>gi|284042486|ref|YP_003392826.1| beta-lactamase [Conexibacter woesei DSM 14684]
 gi|283946707|gb|ADB49451.1| beta-lactamase [Conexibacter woesei DSM 14684]
          Length = 461

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                  LL+ +TG        D  +   S+TKL TA +V   + E +  L 
Sbjct: 39 QVATAAAGLLNLDTG---VAATADSLFQIGSITKLYTATLVMQLVDEGRIDLD 88


>gi|239981408|ref|ZP_04703932.1| beta-lactamase [Streptomyces albus J1074]
 gi|291453264|ref|ZP_06592654.1| beta-lactamase [Streptomyces albus J1074]
 gi|291356213|gb|EFE83115.1| beta-lactamase [Streptomyces albus J1074]
          Length = 312

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 61/229 (26%), Gaps = 8/229 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
            DT +G  +A    D  +   S+ K +++  V   L      L+  I  +++  E     
Sbjct: 69  YDTGSGRTVAYR-ADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRILYTQDDVEQADGA 127

Query: 94  STFKKGSTMTLDNALKLLIV---KSANDIAVAIAESLCKTEKK---FVQHMNNTSKNLGL 147
               K   +     ++ L      ++++ A  +             FV+ + +    L  
Sbjct: 128 PETGKPQNLANGMTVEELCEVSITASDNCAANLMLRELGGPAAVTRFVRSLGDRVTRLDR 187

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                 +A         +           +  D         +    +      +   A 
Sbjct: 188 WEPELNSAEPGRVTDTTSPRAITRTYGRLVLGDALNPRDRRLLTSWLLANTTSGDRFRAG 247

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                  G KTG       N         +  ++  +L A       + 
Sbjct: 248 LPDDWTLGDKTGAGRYGTNNDAGVTWPPGRAPIVLTVLTAKTEQDAARD 296


>gi|226329802|ref|ZP_03805320.1| hypothetical protein PROPEN_03714 [Proteus penneri ATCC 35198]
 gi|225200597|gb|EEG82951.1| hypothetical protein PROPEN_03714 [Proteus penneri ATCC 35198]
          Length = 259

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 58/200 (29%), Gaps = 3/200 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    V    +++  +L   I I K+        +     + M+L  
Sbjct: 28  GEERFAMASTSKVMAVAAVLKESEKQAGLLDKNIAIKKSDLVAYSPITEKHLVTGMSLAQ 87

Query: 107 ALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I +      +  +F + +N+ +  L         A         
Sbjct: 88  LSAATLQYSDNTAMNKILDYLGGPSSVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 147

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +       L      D        Q+           ++  A        G KTG     
Sbjct: 148 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDHSIKAGLPKHWIVGDKTGSGDYG 207

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     +   LI V+
Sbjct: 208 TTNDIAVIWPENHAPLILVV 227


>gi|239621576|ref|ZP_04664607.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515451|gb|EEQ55318.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 496

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
            S +   L  A+        +++   G V AE+  + P  PAS  K +TA   
Sbjct: 92  ASALVNELLSAQGVGNDTSVIIEDAQGAVAAEHESNTPREPASTLKTLTALAA 144


>gi|158425902|ref|YP_001527194.1| beta-lactamase precursor [Azorhizobium caulinodans ORS 571]
 gi|158332791|dbj|BAF90276.1| beta-lactamase precursor [Azorhizobium caulinodans ORS 571]
          Length = 296

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 67/231 (29%), Gaps = 7/231 (3%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           ++DT TG     +     +   S  K + A  V +        LT  + I++        
Sbjct: 53  VIDTGTGAR-FAHRGGERFPMCSTFKFLLAAAVLAEADRGHLKLTDMVPITRADLIAYAP 111

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
                 GS M+L +     ++ S N  A  +           +F++   +    L  +  
Sbjct: 112 EVEKHVGSGMSLSDLCAAAVIWSDNGAANLLLRQIGGPAAVTRFLRSAGDPVTRLDRAEP 171

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                         T       +   +  D         +K   I  +       A    
Sbjct: 172 ELNVVPEGSDMDTTTPDAVADDMVRLVLGDVLVPASRGALKDWLIGCRTGDKRLRAGLPK 231

Query: 211 LGADGMKTGFTCA--SGFNIVASAIQGDQS--LIAVILGALDRNTRNKVSA 257
               G KTG   A     N VA A    ++  +IA  L A   + R   + 
Sbjct: 232 GWTVGDKTGTGPARTGTSNDVAIAWPPGRAPLVIASYLTASRLDGRGSDAI 282


>gi|94993406|ref|YP_601504.1| beta-lactamase [Streptococcus pyogenes MGAS10750]
 gi|94546914|gb|ABF36960.1| Beta-lactamase [Streptococcus pyogenes MGAS10750]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYTKDVNHFYGDYDPLGSGKISKIA 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|157830453|pdb|1BSG|A Chain A, Beta-Lactamase From Streptomyces Albus G
          Length = 266

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 61/229 (26%), Gaps = 8/229 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
            DT +G  +A    D  +   S+ K +++  V   L      L+  I  +++  E     
Sbjct: 23  YDTGSGRTVAYR-ADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRILYTQDDVEQADGA 81

Query: 94  STFKKGSTMTLDNALKLLIV---KSANDIAVAIAESLCKTEKK---FVQHMNNTSKNLGL 147
               K   +     ++ L      ++++ A  +             FV+ + +    L  
Sbjct: 82  PETGKPQNLANGMTVEELCEVSITASDNCAANLMLRELGGPAAVTRFVRSLGDRVTRLDR 141

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
                 +A         +           +  D         +    +      +   A 
Sbjct: 142 WEPELNSAEPGRVTDTTSPRAITRTYGRLVLGDALNPRDRRLLTSWLLANTTSGDRFRAG 201

Query: 208 GTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
                  G KTG       N         +  ++  +L A       + 
Sbjct: 202 LPDDWTLGDKTGAGRYGTNNDAGVTWPPGRAPIVLTVLTAKTEQDAARD 250


>gi|332653736|ref|ZP_08419480.1| penicillin-binding protein 2 [Ruminococcaceae bacterium D16]
 gi|332516822|gb|EGJ46427.1| penicillin-binding protein 2 [Ruminococcaceae bacterium D16]
          Length = 746

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 37/151 (24%), Gaps = 28/151 (18%)

Query: 25  TNKLPYYTLLDTNTGHVIAE-------------------NYPDHPW---------NPASL 56
             +     +LD N+G V+A                      P  P           P S 
Sbjct: 402 ETEGAACVVLDVNSGDVLASASYPTYSLTTFSQDYNDLSKDPLKPLLNRALQGLYPPGST 461

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K++TA         +         +    S   P    +++         +   I+ S 
Sbjct: 462 FKMITAIAALESGIVEPDTQIDDKGVYTFYSSPQPQCWYYRQYRRTHGLQNVSQAIMNSC 521

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
           N     +   +          M    +  G+
Sbjct: 522 NYYFYEVGRLVGIDLLDQYAAMFGLGQKTGI 552


>gi|319900361|ref|YP_004160089.1| Peptidoglycan glycosyltransferase [Bacteroides helcogenes P 36-108]
 gi|319415392|gb|ADV42503.1| Peptidoglycan glycosyltransferase [Bacteroides helcogenes P 36-108]
          Length = 708

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 21/130 (16%)

Query: 31  YTLLDTNTGHV-------------IAENYPDHP---WNPASLTKLMTAYVVFSFLKEKKA 74
             L++  TG V               E   +       P S  K  +  V      + K 
Sbjct: 265 AILMEVATGEVKAIVNMMKADDGNYYEMNSNAISDMLEPGSTFKTASIMVALE---DGKI 321

Query: 75  MLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              T +           S               N  ++L V S   ++  I +      +
Sbjct: 322 TPDTEVDTGNGIMNMYGSKMRDHNWHRGGYGKINVTRILEVSSNVGVSYLIDKHYKDNPQ 381

Query: 133 KFVQHMNNTS 142
           K+V  +   S
Sbjct: 382 KYVDGLKRMS 391


>gi|149919212|ref|ZP_01907695.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Plesiocystis pacifica SIR-1]
 gi|149819926|gb|EDM79348.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Plesiocystis pacifica SIR-1]
          Length = 548

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 27  KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           K      L D ++G  +A    +   +PAS  KL+TA     
Sbjct: 117 KARVAVELRDLDSGARLASIGAERGLHPASTQKLITAIAAVE 158


>gi|15674259|ref|NP_268432.1| hypothetical protein SPy_0012 [Streptococcus pyogenes M1 GAS]
 gi|71909824|ref|YP_281374.1| beta-lactamase [Streptococcus pyogenes MGAS5005]
 gi|13621334|gb|AAK33154.1| hypothetical protein SPy_0012 [Streptococcus pyogenes M1 GAS]
 gi|71852606|gb|AAZ50629.1| beta-lactamase [Streptococcus pyogenes MGAS5005]
          Length = 428

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 55/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T +K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYTKDVNHFYGDYDPLGSGKISKIA 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|300783963|ref|YP_003764254.1| penicillin-binding protein, transpeptidase [Amycolatopsis
           mediterranei U32]
 gi|299793477|gb|ADJ43852.1| penicillin-binding protein, transpeptidase [Amycolatopsis
           mediterranei U32]
          Length = 586

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 26/85 (30%), Gaps = 13/85 (15%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTL--LDTNTGHVIA-ENYP--DH--------PWNP 53
            +   + + I      A   +     L  +  ++G ++A       D          + P
Sbjct: 287 AVTSTLSAKIQAAAEKALATEPYSAALVAIQPSSGDILAVAQNAAADEEGSLALSGRYPP 346

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTT 78
            S  K++TA    S  + +      
Sbjct: 347 GSTFKIVTAAAALSAGEVEAGSPVD 371


>gi|148979042|ref|ZP_01815287.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrionales
          bacterium SWAT-3]
 gi|145962015|gb|EDK27303.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrionales
          bacterium SWAT-3]
          Length = 477

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 7/72 (9%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIA-------ETNKLPYYTLLDTNTGHVIAENYPDHPWNP 53
          MR    ++  +   + F   + A                L   +          D  + P
Sbjct: 1  MRLLSTLLVCSFSISAFSINAFAYVPLDTLPDGSSTSLILKSLSDDSSELNTNSDDFYPP 60

Query: 54 ASLTKLMTAYVV 65
          AS  KL+TA   
Sbjct: 61 ASTLKLVTALAA 72


>gi|21225869|ref|NP_631648.1| hydrolase [Streptomyces coelicolor A3(2)]
 gi|11322396|emb|CAC16709.1| putative hydrolase [Streptomyces coelicolor A3(2)]
          Length = 393

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              + D +TG  +     D      S+TK  TA  V   +++ + +L 
Sbjct: 60  AAGVADVDTGRPVT---ADLRHRVGSITKTFTAAAVLQQVEQGRIVLD 104


>gi|333027787|ref|ZP_08455851.1| putative stage V sporulation protein D [Streptomyces sp. Tu6071]
 gi|332747639|gb|EGJ78080.1| putative stage V sporulation protein D [Streptomyces sp. Tu6071]
          Length = 511

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 26/152 (17%)

Query: 30  YYTLLDTNTGHVIAENYP---------------------DHPWNPASLTKLMTAYVVFSF 68
           Y  + DT TG ++A                            + P S +K+M+   V   
Sbjct: 173 YVIVQDTRTGEILALANAPGFDPNDLRHADVDALGNPALQDAYEPGSTSKIMSMAAVLEE 232

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K           ++                +  T    L  ++ KS+N   +     L 
Sbjct: 233 NKATPGT-----HVTVPGELRRGDRIFHDDIAHGTWHLTLNGVLAKSSNIGTILATGQLG 287

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            T+++  + +++     G+ +   +   G   
Sbjct: 288 GTQQQANRVLHSYLHKFGIGSPTGLGFPGETS 319


>gi|318081644|ref|ZP_07988957.1| cell division protein FtsI/penicillin-binding protein [Streptomyces
           sp. SA3_actF]
          Length = 500

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 26/152 (17%)

Query: 30  YYTLLDTNTGHVIAENYP---------------------DHPWNPASLTKLMTAYVVFSF 68
           Y  + DT TG ++A                            + P S +K+M+   V   
Sbjct: 260 YVIVQDTRTGEILALANAPGFDPNDLRHADVDALGNPALQDAYEPGSTSKIMSMAAVLEE 319

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K           ++                +  T    L  ++ KS+N   +     L 
Sbjct: 320 NKATPGT-----HVTVPGELRRGDRIFHDDIAHGTWHLTLNGVLAKSSNIGTILATGQLG 374

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            T+++  + +++     G+ +   +   G   
Sbjct: 375 GTQQQANRVLHSYLHKFGIGSPTGLGFPGETS 406


>gi|302518534|ref|ZP_07270876.1| stage V sporulation protein D [Streptomyces sp. SPB78]
 gi|318057548|ref|ZP_07976271.1| cell wall biosynthesis protein [Streptomyces sp. SA3_actG]
 gi|302427429|gb|EFK99244.1| stage V sporulation protein D [Streptomyces sp. SPB78]
          Length = 581

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 26/152 (17%)

Query: 30  YYTLLDTNTGHVIAENYP---------------------DHPWNPASLTKLMTAYVVFSF 68
           Y  + DT TG ++A                            + P S +K+M+   V   
Sbjct: 243 YVIVQDTRTGEILALANAPGFDPNDLRHADVDALGNPALQDAYEPGSTSKIMSMAAVLEE 302

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K           ++                +  T    L  ++ KS+N   +     L 
Sbjct: 303 NKATPGT-----HVTVPGELRRGDRIFHDDIAHGTWHLTLNGVLAKSSNIGTILATGQLG 357

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            T+++  + +++     G+ +   +   G   
Sbjct: 358 GTQQQANRVLHSYLHKFGIGSPTGLGFPGETS 389


>gi|255532237|ref|YP_003092609.1| beta-lactamase [Pedobacter heparinus DSM 2366]
 gi|255345221|gb|ACU04547.1| beta-lactamase [Pedobacter heparinus DSM 2366]
          Length = 803

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 61/231 (26%), Gaps = 14/231 (6%)

Query: 27  KLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN 85
              +     D  TG           ++ AS  K      VF    + K  ++  + +   
Sbjct: 547 NADFAVAYKDLGTGET-FLMNAKTNFHAASTMKTPVMAEVFKQAAKGKFAISDSVVVYNQ 605

Query: 86  ASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE-------SLCKTEKKFVQHM 138
                         +  +       +  K + +  + +         +    +K   +++
Sbjct: 606 FKSIAGGGLYKLDPANDSELELYHKIGKKMSIENLLLLMITRSSNLATNILIDKVGAKNV 665

Query: 139 NNTSKNLGLSATHF-----MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGL 193
           N T +++G                     +  TA D+ +L  +I           +    
Sbjct: 666 NKTMRSIGAHDIQVLRGVEDGKAFEKGMNNTVTAYDLMLLFEKIAKGDMVNKKASEAMVD 725

Query: 194 EIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
            +  + +     A          KTG       +     +   +  + V+L
Sbjct: 726 ILMQQTFRGIIPARLPKEVKVANKTGSITKVLNDSGIVYLPDGREYVLVLL 776


>gi|120404501|ref|YP_954330.1| peptidoglycan glycosyltransferase [Mycobacterium vanbaalenii PYR-1]
 gi|119957319|gb|ABM14324.1| Peptidoglycan glycosyltransferase [Mycobacterium vanbaalenii PYR-1]
          Length = 652

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 22/69 (31%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDH----------------------PWNPASLTKLM 60
           A   K     +LD  TG V+A +  +                       P+ P S+ K++
Sbjct: 305 ASGAKNASAVVLDAKTGEVLAMSNDNTFNPAQDLSRQENRQLGNLPVSSPFEPGSVNKMI 364

Query: 61  TAYVVFSFL 69
           TA  V    
Sbjct: 365 TAAAVIENN 373


>gi|315503389|ref|YP_004082276.1| d-alanyl-d-alanine
           carboxypeptidase/d-alanyl-d-alanine-endopeptidase
           [Micromonospora sp. L5]
 gi|315410008|gb|ADU08125.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Micromonospora sp. L5]
          Length = 588

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFL 69
           + D +T   +  +  D P  PAS+TKL T   V +  
Sbjct: 202 VADVSTSQALYGSGQDTPTVPASVTKLATGVAVLAAR 238


>gi|270291800|ref|ZP_06198016.1| penicillin-binding protein 1B [Streptococcus sp. M143]
 gi|270279885|gb|EFA25726.1| penicillin-binding protein 1B [Streptococcus sp. M143]
          Length = 820

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 37/134 (27%), Gaps = 15/134 (11%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 427 VLMDNQTGAILGFVGGRNYQENQNNHAIDTKRSPASTTKPILAYGIAIDQGLMGSASILS 486

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +                K +++ M
Sbjct: 487 NYPTNFANGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 544

Query: 139 NNTSKNLGLSATHF 152
                  G+ +   
Sbjct: 545 GYEIPEYGIESLPM 558


>gi|54294337|ref|YP_126752.1| hypothetical protein lpl1405 [Legionella pneumophila str. Lens]
 gi|53754169|emb|CAH15645.1| hypothetical protein lpl1405 [Legionella pneumophila str. Lens]
          Length = 266

 Score = 38.4 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 49/203 (24%), Gaps = 11/203 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI--AENYPDHPWNPASLTK 58
           M++ ++ +   +L  +    +                   V+    N  D  ++PAS  K
Sbjct: 1   MKKIIIFLCTGLLFCV-STWAQGTCFLAK-------ENQTVLKREGNDCDQRYSPASTFK 52

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +  + + F     K   L       K    Y       +   T   D+ +      +   
Sbjct: 53  IALSLMGFDSGILKD-ELHPEWPYKKEYELYLNVWKYPQNPHTWIRDSCVWYSQALTRQL 111

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
                   +            +  +N GL+     ++  +         + +      + 
Sbjct: 112 GMKRFKGYVDAFHYGNQDVSGDRGQNNGLTNAWLSSSLSISPAEQIQFLQKIIYKKLPVS 171

Query: 179 TDFPQYMHYFQIKGLEIKGKKYP 201
                             G K  
Sbjct: 172 QKAYTITKNIMYIQELPGGWKLY 194


>gi|297539598|ref|YP_003675367.1| peptidoglycan glycosyltransferase [Methylotenera sp. 301]
 gi|297258945|gb|ADI30790.1| Peptidoglycan glycosyltransferase [Methylotenera sp. 301]
          Length = 586

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 23/85 (27%), Gaps = 23/85 (27%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP---------------WNPASLTKL 59
                        +LD  TG V+A        P++P               + P S  K 
Sbjct: 251 AVEENKAAAGAAIVLDAKTGEVLAMTNVPTYNPNNPVNIKGKTRNRAIVDTFEPGSTLKP 310

Query: 60  MTAYVVFSFLKEKKAMLTTPITISK 84
           +TA          +    T I  S 
Sbjct: 311 VTAAAALES---GQYTPDTKIQTSP 332


>gi|297158564|gb|ADI08276.1| beta-lactamase [Streptomyces bingchenggensis BCW-1]
          Length = 395

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 30  YYTLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              + D  +G  V+     D  +   S+TK++TA VV   + E K  L 
Sbjct: 80  AAGVRDLTSGQPVL----ADGRFRAGSVTKVLTAAVVLQLVAEHKVALN 124


>gi|262401670|ref|ZP_06078236.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC586]
 gi|262352087|gb|EEZ01217.1| D-alanyl-D-alanine carboxypeptidase [Vibrio sp. RC586]
          Length = 481

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 6/70 (8%)

Query: 2  RQFLVIIAMAM-----LSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPAS 55
          R+ L++ A                +        +  L+ D  +   +        + PAS
Sbjct: 8  RRLLLLSAFLFHPIANAQTQLDSATSKLPAGSRFALLIEDVASQQPVLNVNTHLYYPPAS 67

Query: 56 LTKLMTAYVV 65
            K+ TA   
Sbjct: 68 TQKIFTALAA 77


>gi|170780645|ref|YP_001708977.1| putative secreted peptidase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155213|emb|CAQ00314.1| putative secreted peptidase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 453

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           D  TG V+ +     P   AS+ K++T+    
Sbjct: 81  DAATGRVLFDRNGSTPERTASVMKVITSAAAL 112


>gi|149278201|ref|ZP_01884339.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Pedobacter sp.
          BAL39]
 gi|149230967|gb|EDM36348.1| Peptidase S13, D-Ala-D-Ala carboxypeptidase C [Pedobacter sp.
          BAL39]
          Length = 448

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
          L D     +I E   +  + PAS TKL T Y
Sbjct: 61 LYDPENDRMIFEKDAEKYFIPASNTKLFTFY 91


>gi|148272111|ref|YP_001221672.1| D-alanyl-D-alanine carboxypeptidase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147830041|emb|CAN00970.1| D-alanyl-D-alanine carboxypeptidase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 452

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           D  TG V+ +     P   AS+ K++T+    
Sbjct: 80  DAATGRVLFDRNGSTPERTASVMKVITSAAAL 111


>gi|54295426|ref|YP_127841.1| hypothetical protein lpl2512 [Legionella pneumophila str. Lens]
 gi|53755258|emb|CAH16752.1| hypothetical protein lpl2512 [Legionella pneumophila str. Lens]
          Length = 597

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D  +G  + +   +  + PAS  KL +       
Sbjct: 43 VVTDLTSGETLYKRNANRLYIPASNMKLFSEAAALMA 79


>gi|85704394|ref|ZP_01035496.1| penicillin-binding protein 2 [Roseovarius sp. 217]
 gi|85670802|gb|EAQ25661.1| penicillin-binding protein 2 [Roseovarius sp. 217]
          Length = 647

 Score = 38.4 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 36/165 (21%), Gaps = 37/165 (22%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAE----------------------- 44
           I + + + +  + +     +     +LD  TG ++A                        
Sbjct: 247 IQLTLNNTLQSYANARLDGESAAVVMLDCETGDILACASSPSYDPNLFVRGISVADYRAL 306

Query: 45  -NYPDHPWN---------PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
            + P  P           P S  K++TA             L   +       E      
Sbjct: 307 LDDPYRPLPNKAVQGIYPPGSTFKMVTALAALEA---GDMSLQDTVYC-PGHLEISGRRF 362

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
              K       +    L              +  +      + + 
Sbjct: 363 HCWKRGGHGNMDLHLSLRESCDVYYYELALRTGIENISAMAERLG 407


>gi|322375990|ref|ZP_08050500.1| penicillin-binding protein 1B [Streptococcus sp. C300]
 gi|321278940|gb|EFX55983.1| penicillin-binding protein 1B [Streptococcus sp. C300]
          Length = 832

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 15/134 (11%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 431 VLMDNQTGAILGFVGGRNYQENQNNHAIDTKRSPASTTKPILAYGIAIDQGLMGSASILS 490

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               + +        ++   G     +       + +                K +++ M
Sbjct: 491 NYPTNFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 548

Query: 139 NNTSKNLGLSATHF 152
                  G+ +   
Sbjct: 549 GYEIPEYGIESLPM 562


>gi|153805785|ref|ZP_01958453.1| hypothetical protein BACCAC_00021 [Bacteroides caccae ATCC 43185]
 gi|149130462|gb|EDM21668.1| hypothetical protein BACCAC_00021 [Bacteroides caccae ATCC 43185]
          Length = 1544

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 59/231 (25%), Gaps = 14/231 (6%)

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              +L         +V ++              +     +      +    GV      +
Sbjct: 1   MIQRLSFWIMMIVCSVMVSGQEYDGYYTNPILPSGADPWVVKHEGWYYYCCGVPGGIGVS 60

Query: 166 TARDMAILS-----WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
            +RD+  ++     W+                L     K+        +       KTG 
Sbjct: 61  RSRDLHKINPPVRVWKAPEKGQWNSTCIWAPELHFWKGKWYIFYAGGYSGPPFIHQKTGV 120

Query: 221 TCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS-----MG-FYNKTDRKKIN 274
             +   + +   I         +LG   +N R  +  +LL         +    + +  +
Sbjct: 121 LESVTSDAMGEYIDKGMLFTGDVLG-DWKNNRWAIDMTLLEHKGQLYAVWSGWENSEPTD 179

Query: 275 YIIKDFYQQNLSN--EVPNISEEVCTTQKEIINYNTQMKEAKDKESHFIDF 323
              +  Y   + N   + +   ++ +  +        + E      H  D 
Sbjct: 180 KTQQHLYIAKMENPWTMASGRVKISSPDRYYEQGELPLNEGPQILKHGKDV 230


>gi|18041936|gb|AAL57765.1| beta-lactamase precursor HugA [Proteus penneri]
          Length = 298

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 58/200 (29%), Gaps = 3/200 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            +  +  AS +K+M    V    +++  +L   I I K+        +     + M+L  
Sbjct: 65  GEERFAMASTSKVMAVAAVLKESEKQAGLLDKNIAIKKSDLVAYSPITEKHLVTGMSLAQ 124

Query: 107 ALKLLIVKSANDIAVAIAES--LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                +  S N     I +      +  +F + +N+ +  L         A         
Sbjct: 125 LSAATLQYSDNTAMNKILDYLGGPSSVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT 184

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
           +       L      D        Q+           ++  A        G KTG     
Sbjct: 185 SPIAMAKSLQALTLGDALGQSQRQQLVTWLKGNTTGDHSIKAGLPKHWIVGDKTGSGDYG 244

Query: 225 GFNIVASAIQGDQ-SLIAVI 243
             N +A     +   LI V+
Sbjct: 245 TTNDIAVIWPENHAPLILVV 264


>gi|325334981|gb|ADZ11255.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Riemerella
          anatipestifer RA-GD]
          Length = 466

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 13/80 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTL-------------LDTNTGHVIAENYP 47
          M +FL+ I     S         + +K     L             +    G+ I E   
Sbjct: 1  MTKFLIFILTFFYSLGIAQSIKDKLDKATKAFLNSPKMYAANMSFYVADENGNFIYEYQG 60

Query: 48 DHPWNPASLTKLMTAYVVFS 67
          +   + AS  K+ TA     
Sbjct: 61 NKGLSTASTQKIFTAATALE 80


>gi|315612022|ref|ZP_07886939.1| penicillin-binding protein 1B [Streptococcus sanguinis ATCC 49296]
 gi|315315824|gb|EFU63859.1| penicillin-binding protein 1B [Streptococcus sanguinis ATCC 49296]
          Length = 835

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 15/134 (11%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 434 VLMDNQTGAILGFVGGRNYQENQNNHAIDTKRSPASTTKPILAYGIAIDQGLMGSASILS 493

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               + +        ++   G     +       + +                K +++ M
Sbjct: 494 NYPTNFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 551

Query: 139 NNTSKNLGLSATHF 152
                  G+ +   
Sbjct: 552 GYEIPEYGIESLPM 565


>gi|332701656|ref|ZP_08421744.1| hypothetical protein Desaf_0495 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551805|gb|EGJ48849.1| hypothetical protein Desaf_0495 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 343

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 60/233 (25%), Gaps = 23/233 (9%)

Query: 30  YYTLLDTNTGH--VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS 87
              L+D        +A    +     ASL K+      F    +    L     +S    
Sbjct: 85  AACLVDVTDPAHPRLAMVNGERMMYAASLPKIAILLAAFEKADQGGLSLGQAERLSLARM 144

Query: 88  EYPPSNSTFKKGSTMTLDNA----LKLLIVKSANDIAVAIAESLCKTEKK-FVQHMNNTS 142
               SN+           +     L+    +  +           +  K    +      
Sbjct: 145 IRRSSNTDASAMLAKVGRDYLIEVLESERYRLYDPAGHGGLWVGKEYGKAPAYRRDPLAG 204

Query: 143 KNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPN 202
            + G +A      + ++  G   +    A +   +      +     ++      + Y  
Sbjct: 205 LSHGATAFQVARFYYLLHTGQLVSPERCAEMKTLLANSALDHKFVAGLRKTCPTARVYR- 263

Query: 203 TNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKV 255
                         K+G + +   +  A      ++ IAV L A    +R   
Sbjct: 264 --------------KSG-SWSVYHSDSALVEHDGRTYIAVALTADPDGSRWLE 301


>gi|296454759|ref|YP_003661902.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296184190|gb|ADH01072.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 496

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
              + D   G V AE+  + P  PAS  K +TA   
Sbjct: 110 SVIIEDAQ-GTVAAEHESNTPREPASTLKTLTALAA 144


>gi|239979466|ref|ZP_04701990.1| alkaline D-peptidase [Streptomyces albus J1074]
 gi|291451335|ref|ZP_06590725.1| dipeptidil carboxypeptidase [Streptomyces albus J1074]
 gi|291354284|gb|EFE81186.1| dipeptidil carboxypeptidase [Streptomyces albus J1074]
          Length = 398

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 3/45 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D +TG        D  +   S+TK   A V+     E++  L   
Sbjct: 84  DLDTGR---ARGADDRFRIGSVTKTFVATVLLQLQGERRIDLDDT 125


>gi|238024897|ref|YP_002909129.1| beta-lactamase [Burkholderia glumae BGR1]
 gi|237879562|gb|ACR31894.1| Beta-lactamase [Burkholderia glumae BGR1]
          Length = 298

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 45/193 (23%), Gaps = 18/193 (9%)

Query: 32  TLLDTNTGHVIAENYP--DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            + D  +G V+AE          PAS  K+  + + F        +LT            
Sbjct: 50  IVADAASGRVLAERGEGCATRVTPASTFKIALSLMGFDA-----GVLTD----------A 94

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                 F+ G      +A +     +          S   T++       + ++  G   
Sbjct: 95  HAPVLPFRAGYPDWGGDAWRQPTDPARWMRYSVFWYSQQLTQRLGQARFASYTQRFGYGN 154

Query: 150 THFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                  G          +  + I            ++                T     
Sbjct: 155 ADVAPGPGEFAGMKGAWNSGSLRIAPREQIAFLRAIVNRTLPVSAHAFEMTDRITLIDAQ 214

Query: 209 TFLGADGMKTGFT 221
                   KTG +
Sbjct: 215 PDGWIVHGKTGTS 227


>gi|52080504|ref|YP_079295.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
          [Bacillus licheniformis ATCC 14580]
 gi|52003715|gb|AAU23657.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
          [Bacillus licheniformis ATCC 14580]
          Length = 489

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
            +G +I  +  D    PAS  KL+TA   +
Sbjct: 60 AESGKMIYGHMGDTRMRPASNLKLLTAAAAY 90


>gi|307611469|emb|CBX01138.1| hypothetical protein LPW_28371 [Legionella pneumophila 130b]
          Length = 597

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D  +G  + +   +  + PAS  KL +       
Sbjct: 43 VVTDLTSGETLYKRNANRLYIPASNMKLFSEAAALMA 79


>gi|256425132|ref|YP_003125785.1| beta-lactamase [Chitinophaga pinensis DSM 2588]
 gi|256040040|gb|ACU63584.1| beta-lactamase [Chitinophaga pinensis DSM 2588]
          Length = 286

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/230 (10%), Positives = 63/230 (27%), Gaps = 5/230 (2%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           +  TG    +   D  +  AS+ K+     VF  +++ +     P+    +         
Sbjct: 44  NLKTGR-YVDINADTIFPTASIVKVPILVGVFDKIEKGELSYHQPLMYRDSIKYGGSGLM 102

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
            F K ST T  + L  L++  +++      ++L    ++  + M     N     +    
Sbjct: 103 QFFKDSTETDLSVLVALMMAYSDNTTSLWNQALAGGGQRINELMAQYGLNNTRVNSRTPG 162

Query: 155 AHGVVQHGHY-TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
              +     +  T                        +   +    Y +           
Sbjct: 163 REAIRNVYGWGMTTPREMSELLVKIRKGEVISENASSRMYRLMTHGYYDEVGLSQIPPYT 222

Query: 214 DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN---KVSASLL 260
                  +  +  + V          +  +    +++ R      + +L+
Sbjct: 223 QAAHKSGSVDASRSEVILVNAPHGEYVFYVGTKNNKDQRWTNENEAENLI 272


>gi|262203877|ref|YP_003275085.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Gordonia bronchialis DSM 43247]
 gi|262087224|gb|ACY23192.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Gordonia bronchialis DSM 43247]
          Length = 465

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMT 61
           D  TG V+       P  PAS  K++T
Sbjct: 102 DAITGQVLWSRNAGTPRIPASNDKVLT 128


>gi|187931852|ref|YP_001891837.1| beta-lactamase class A [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187712761|gb|ACD31058.1| beta-lactamase class A [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 294

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 52/212 (24%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +       M
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQIM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFNLSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N   A        G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILDKKHRLMFKQWLIASNTSNNRIAAEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|54298578|ref|YP_124947.1| hypothetical protein lpp2642 [Legionella pneumophila str. Paris]
 gi|53752363|emb|CAH13795.1| hypothetical protein lpp2642 [Legionella pneumophila str. Paris]
          Length = 597

 Score = 38.0 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D  +G  + +   +  + PAS  KL +       
Sbjct: 43 VVTDLTSGETLYKRNANRLYIPASNMKLFSEAAALMA 79


>gi|312194896|ref|YP_004014957.1| penicillin-binding protein transpeptidase [Frankia sp. EuI1c]
 gi|311226232|gb|ADP79087.1| penicillin-binding protein transpeptidase [Frankia sp. EuI1c]
          Length = 631

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTL-LDTNTGHVIAENYP---------DHPWNPASLTK 58
           ++++        ++A +       + +DT TG ++A                + P S  K
Sbjct: 320 SISLSVQQAAEAALATSRWPAAALVAIDTRTGGILASANHPPSGYGRALRGTYPPGSTFK 379

Query: 59  LMTAYVVFSFLKEKKAMLTTPITI 82
           ++TA       +     L    TI
Sbjct: 380 IVTATAALMNGRNANTQLDCSQTI 403


>gi|219920913|emb|CAQ76634.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 57/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q +   +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGEVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|219871299|ref|YP_002475674.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase,
          penicillin-binding protein 4 [Haemophilus parasuis
          SH0165]
 gi|219691503|gb|ACL32726.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase,
          penicillin-binding protein 4 precursor [Haemophilus
          parasuis SH0165]
          Length = 282

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 1  MRQFLVIIA-----MAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
          +R  L+ +       +   +I PF+S             + +T  ++ +   D    PAS
Sbjct: 9  LRILLLTLFYMPYSASAEVDITPFISHLPKGTSISVIAKNLSTDQIVVDYQSDLFMLPAS 68

Query: 56 LTKLMTAY 63
            K+ TA 
Sbjct: 69 TQKVFTAL 76


>gi|183597058|ref|ZP_02958551.1| hypothetical protein PROSTU_00296 [Providencia stuartii ATCC 25827]
 gi|188023719|gb|EDU61759.1| hypothetical protein PROSTU_00296 [Providencia stuartii ATCC 25827]
          Length = 334

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 5/115 (4%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT--PITISKNASEYPPSNSTFKKGSTMTLD 105
           D P   AS TK  TA  +   ++  K  L       I+   ++    +      +   L 
Sbjct: 47  DTPLRIASNTKTFTAAAILRLVEMGKLSLDDAISQHITPEFNQLLCDSYATDHIAIRHLL 106

Query: 106 NALKLLIVKSANDIAVAI---AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           +    L   + +     +           ++   ++      +  S T   +  G
Sbjct: 107 SHSSGLFDHADDHYLKRVLAKPTHQWTRLEQIQLYVRKKFPVVAPSDTFIYSDTG 161


>gi|52842795|ref|YP_096594.1| D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin
          binding protein 4 [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|148358677|ref|YP_001249884.1| D-alanyl-D-alanine carboxypeptidase [Legionella pneumophila str.
          Corby]
 gi|296108233|ref|YP_003619934.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
          4) [Legionella pneumophila 2300/99 Alcoy]
 gi|52629906|gb|AAU28647.1| D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin
          binding protein 4 [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|148280450|gb|ABQ54538.1| D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin
          binding protein 4 [Legionella pneumophila str. Corby]
 gi|295650135|gb|ADG25982.1| D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein
          4) [Legionella pneumophila 2300/99 Alcoy]
          Length = 597

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
           + D  +G  + +   +  + PAS  KL +       
Sbjct: 43 VVTDLTSGETLYKRNANRLYIPASNMKLFSEAAALMA 79


>gi|145223569|ref|YP_001134247.1| peptidoglycan glycosyltransferase [Mycobacterium gilvum PYR-GCK]
 gi|315443916|ref|YP_004076795.1| cell division protein FtsI/penicillin-binding protein 2
           [Mycobacterium sp. Spyr1]
 gi|145216055|gb|ABP45459.1| Peptidoglycan glycosyltransferase [Mycobacterium gilvum PYR-GCK]
 gi|315262219|gb|ADT98960.1| cell division protein FtsI/penicillin-binding protein 2
           [Mycobacterium sp. Spyr1]
          Length = 635

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 22/68 (32%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDH----------------------PWNPASLTKLM 60
           A   K     +LD  TG V+A +  +                       P+ P S+ K++
Sbjct: 288 ASGAKNASAVVLDAKTGEVLAMSNDNTFNPAQDVSRQENRQLGNLPVSSPFEPGSVNKMI 347

Query: 61  TAYVVFSF 68
           TA  V   
Sbjct: 348 TAAAVIEN 355


>gi|258654658|ref|YP_003203814.1| beta-lactamase [Nakamurella multipartita DSM 44233]
 gi|258557883|gb|ACV80825.1| beta-lactamase [Nakamurella multipartita DSM 44233]
          Length = 740

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                +  AS TK MT+ V+    +E K  L  P
Sbjct: 112 DARTHFRIASNTKTMTSAVILQLAQEGKLRLDDP 145


>gi|219920929|emb|CAQ76642.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A       
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGGGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|313681112|ref|YP_004058851.1| beta-lactamase related protein [Oceanithermus profundus DSM 14977]
 gi|313153827|gb|ADR37678.1| beta-lactamase related protein [Oceanithermus profundus DSM 14977]
          Length = 390

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 17/68 (25%), Gaps = 2/68 (2%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE 71
           + S       +A       + +     G V+A   PD      S  KL     +   +  
Sbjct: 113 LASLAEAEKRMAALAGKKSFLV--LKNGEVLAALDPDARLAVGSTFKLSVLAALLERVGA 170

Query: 72  KKAMLTTP 79
                   
Sbjct: 171 GGLAWEDT 178


>gi|297161281|gb|ADI10993.1| putative cell wall biosynthesis protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 659

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 26/166 (15%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIA-------------ENYPDH--------PWNP 53
           +              Y  + DT TG ++A             +   D          + P
Sbjct: 304 SAISEQVKKSKADSGYVVVQDTRTGEILALANAPGFDPNDISDANADALGNAALSDAYEP 363

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIV 113
            S++KLM+   V        A   T + +           +        T    L  ++ 
Sbjct: 364 GSVSKLMSMAAVLEE---GAATWDTHVVVPNRLP--RADRAFADDIDHPTWYLTLNGVLA 418

Query: 114 KSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           KS+N   +   E L K +K+  + + +  +  G+ +   +   G  
Sbjct: 419 KSSNIGTILATEQLGKNQKQADRILYSYLRKFGIGSYTGLGFPGET 464


>gi|294784138|ref|ZP_06749439.1| beta-lactamase [Fusobacterium sp. 3_1_27]
 gi|294488208|gb|EFG35553.1| beta-lactamase [Fusobacterium sp. 3_1_27]
          Length = 261

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 5/204 (2%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGST 101
                D     AS+ KL+    +   + E K  L+  + ++                G  
Sbjct: 35  FSVNGDKKVLSASMIKLLILAELMKKIFENKFSLSDTVMMANFMKIEGDGVLKELNTGHH 94

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            TL     L+I+ S N     + + L      +  + ++     LG              
Sbjct: 95  FTLKELATLMIIVSDNQATNILIDFLGMENINQLGKELDLKETFLGRK--MMDAEARKKG 152

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + +YT A D+++L   +               L+I  ++                     
Sbjct: 153 YDNYTCADDISLLLK-LIYQEKLINKEASQLMLDILLRQQQGERLQRYLPSDIKIAHKCG 211

Query: 221 TCASGFNIVASAIQGDQSLIAVIL 244
              +  N       GD++ I V+L
Sbjct: 212 DLDNLENDGGIIWLGDRAYILVVL 235


>gi|284042848|ref|YP_003393188.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Conexibacter woesei DSM 14684]
 gi|283947069|gb|ADB49813.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Conexibacter woesei DSM 14684]
          Length = 431

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
             +L+  TG V+A    D    PAS+ KL T     
Sbjct: 44 GAYVLNMTTGSVLASVRADTARIPASVEKLYTTSTAL 80


>gi|218441239|ref|YP_002379568.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Cyanothece sp. PCC 7424]
 gi|218173967|gb|ACK72700.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Cyanothece sp. PCC 7424]
          Length = 475

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 32 TLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           L++    G ++     +  + PAS TKL+T      
Sbjct: 53 ILVETLEDGQILYGVDENQYFVPASNTKLLTTAAALR 89


>gi|88799429|ref|ZP_01115006.1| penicillin-binding protein 2 [Reinekea sp. MED297]
 gi|88777739|gb|EAR08937.1| penicillin-binding protein 2 [Reinekea sp. MED297]
          Length = 556

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 34/158 (21%), Gaps = 38/158 (24%)

Query: 22  IAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTKLM 60
            A         ++D +TG V+A        P+                  + P S+ K +
Sbjct: 229 AANGGTSGSVVMMDVHTGEVLALVNQPGYNPNDRSSLEPEAMRNRAITDLFEPGSVMKPL 288

Query: 61  TAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIA 120
           T  +                                  G        ++      A    
Sbjct: 289 TMALALEAGIVTPQSTVDT-----------------NPGRLKLGRFTIRDFRNYGALTAT 331

Query: 121 VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
             I +S      K  Q +   +   G          G+
Sbjct: 332 EVIKKSSNVGIVKIAQELEAENFWQGFYDFGLGENVGL 369


>gi|331005046|ref|ZP_08328450.1| Cell division protein FtsI (Peptidoglycan synthetase) [gamma
           proteobacterium IMCC1989]
 gi|330421101|gb|EGG95363.1| Cell division protein FtsI (Peptidoglycan synthetase) [gamma
           proteobacterium IMCC1989]
          Length = 467

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 19/84 (22%), Gaps = 21/84 (25%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLT 57
               A         LLD  TG V+A        P+                  + P S  
Sbjct: 252 AAVKAHNAASASMVLLDAKTGEVLAMVNQPSFNPNDRSRLKASALRNRAMTDQFEPGSTM 311

Query: 58  KLMTAYVVFSFLKEKKAMLTTPIT 81
           K +T        +   +       
Sbjct: 312 KPLTVMAALETGRYIPSSTIDTHP 335


>gi|269125387|ref|YP_003298757.1| beta-lactamase [Thermomonospora curvata DSM 43183]
 gi|268310345|gb|ACY96719.1| beta-lactamase [Thermomonospora curvata DSM 43183]
          Length = 459

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 3/47 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           + D  TG  +    P       S+TK  TA  V    +  +  L  P
Sbjct: 112 VADVRTGRPVT---PHMRQRVGSITKTFTAAAVLQQAERGRIRLDDP 155


>gi|239933738|ref|ZP_04690691.1| carboxypeptidase [Streptomyces ghanaensis ATCC 14672]
          Length = 80

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 32 TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           +LD ++  ++ ++       PAS  KL TA    
Sbjct: 1  MVLDADSDKILWDHDGATALMPASNVKLATATAAL 35


>gi|222112453|ref|YP_002554717.1| d-alanyl-d-alanine
           carboxypeptidase/d-alanyl-d-alanine-endopeptidase
           [Acidovorax ebreus TPSY]
 gi|221731897|gb|ACM34717.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Acidovorax ebreus TPSY]
          Length = 499

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 6/60 (10%)

Query: 14  SNIFPFLSIAETNKLP------YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++  P    A   +           +++         +  D P NPAS+ KL+T Y    
Sbjct: 52  ASALPPSVEAALQRAKVPREALSALVVEVEGRQPRLAHRADAPANPASVMKLVTTYAALD 111


>gi|121596225|ref|YP_988121.1| D-alanyl-D-alanine carboxypeptidase PBP3 [Acidovorax sp. JS42]
 gi|120608305|gb|ABM44045.1| D-Ala-D-Ala carboxypeptidase PBP3 [Acidovorax sp. JS42]
          Length = 493

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 6/60 (10%)

Query: 14  SNIFPFLSIAETNKLP------YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           ++  P    A   +           +++         +  D P NPAS+ KL+T Y    
Sbjct: 46  ASALPPSVEAALQRAKVPREALSALVVEVEGRQPRLAHRADAPANPASVMKLVTTYAALD 105


>gi|156977582|ref|YP_001448488.1| beta-lactamase [Vibrio harveyi ATCC BAA-1116]
 gi|156529176|gb|ABU74261.1| hypothetical protein VIBHAR_06370 [Vibrio harveyi ATCC BAA-1116]
          Length = 283

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 62/202 (30%), Gaps = 2/202 (0%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
            +   D  +   S  K +    + S +  +K        + +              G T 
Sbjct: 50  WDYRGDERFPMMSTFKTLACATMLSDMDNEKLDKNATAKVEERNMVVWSPVMDRMAGQTT 109

Query: 103 TLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            +++A +  ++ S N  A  +  +    +    F++ + + +  L         A+   +
Sbjct: 110 RIEHACEATMLMSDNTAANIVLRSIGGPRGVTTFLRSVGDKATRLDRFEPRLNEANPGDK 169

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
               T    +  L   ++ D   Y    Q+K      K   +   +V     +   ++G 
Sbjct: 170 RDTTTPNAMVNTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPKGWSIADRSGA 229

Query: 221 TCASGFNIVASAIQGDQSLIAV 242
                  I A   + +   I +
Sbjct: 230 GGFGSRGITAMIWKENHKPIYI 251


>gi|306826302|ref|ZP_07459636.1| penicillin-binding protein 1B [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431578|gb|EFM34560.1| penicillin-binding protein 1B [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 833

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 15/134 (11%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 434 VLMDNQTGAILGFVGGRNYQENQNNHAIDTKRSPASTTKPILAYGIAIDQGLMGSASILS 493

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               + +        ++   G     +       + +                K +++ M
Sbjct: 494 NYPTNFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 551

Query: 139 NNTSKNLGLSATHF 152
                  G+ +   
Sbjct: 552 GYEIPEYGIESLPM 565


>gi|295822207|gb|ADG36757.1| extended-spectrum class A beta-lactamase [Rahnella sp. 371-Carrot]
 gi|295822211|gb|ADG36759.1| extended-spectrum class A beta-lactamase [Rahnella sp. 377-Radish]
 gi|295822231|gb|ADG36769.1| extended-spectrum class A beta-lactamase [Rahnella sp. 59-Radish]
 gi|295822241|gb|ADG36774.1| extended-spectrum class A beta-lactamase [Rahnella aquatilis]
          Length = 218

 Score = 38.0 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 55/203 (27%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + KK +LT  + + ++        +       MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKESEVKKNLLTQHVALKQSDLVNYNPITEKHLNDGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L    K   + + + + +  L  +      A      
Sbjct: 65  IGELAAAALQYSDNAAMNKLIEHLGGPHKVTDYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHATLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  L+ V 
Sbjct: 185 DYGTTNDIAVIWPENKAPLVLVT 207


>gi|331265555|ref|YP_004325185.1| penicillin-binding protein 1B [Streptococcus oralis Uo5]
 gi|326682227|emb|CBY99844.1| penicillin-binding protein 1B [Streptococcus oralis Uo5]
          Length = 835

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 38/134 (28%), Gaps = 15/134 (11%)

Query: 32  TLLDTNTGHVI-------AENY-----PDHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PAS TK + AY +         A + +
Sbjct: 434 VLMDNQTGAILGFVGGRNYQENQNNHAIDTKRSPASTTKPILAYGIAIDQGLMGSASILS 493

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               + +        ++   G     +       + +                K +++ M
Sbjct: 494 NYPTNFSNGNPIMYVNSPGTGMMTLGEALNYSWNIPAYW--TYRTLREKGVDVKGYMEKM 551

Query: 139 NNTSKNLGLSATHF 152
                  G+ +   
Sbjct: 552 GYEIPEYGIESLPM 565


>gi|320354468|ref|YP_004195807.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Desulfobulbus propionicus DSM 2032]
 gi|320122970|gb|ADW18516.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-
          endopeptidase [Desulfobulbus propionicus DSM 2032]
          Length = 422

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 19/71 (26%), Gaps = 7/71 (9%)

Query: 17 FPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF-----SFLK 70
              +            + D  +G ++     D P  PAS+ K+ T           +  
Sbjct: 24 AATCAAMADLVAQGAYGVADA-SGRIVDSCNLDQPLVPASVLKIATVSAALSLLGPDYRF 82

Query: 71 EKKAMLTTPIT 81
            +  L     
Sbjct: 83 RTEVHLDDQHN 93


>gi|320589781|gb|EFX02237.1| beta-lactamase family protein [Grosmannia clavigera kw1407]
          Length = 440

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 38  TGHVI--AENYP---DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G ++   E      D  ++ ASLTKL T  +    +   K  LT 
Sbjct: 101 NGTILPSYEQEEATVDTIYDMASLTKLFTTIIALQQMDAGKMRLTD 146


>gi|291302147|ref|YP_003513425.1| beta-lactamase [Stackebrandtia nassauensis DSM 44728]
 gi|290571367|gb|ADD44332.1| beta-lactamase [Stackebrandtia nassauensis DSM 44728]
          Length = 374

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 28  LPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                + D ++G  ++   PD      S+TK +TA  +   ++     L  P
Sbjct: 64  ASAVGVADVDSGRPMS---PDFEHRIGSITKTVTAVAILRQVEAGNLDLDDP 112


>gi|294507091|ref|YP_003571149.1| Penicillin-binding protein 4 [Precursor] [Salinibacter ruber M8]
 gi|294343419|emb|CBH24197.1| Penicillin-binding protein 4 [Precursor] [Salinibacter ruber M8]
          Length = 477

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 15/81 (18%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENY 46
          R+ +++  + +     P  ++A+                      ++ D     ++ E  
Sbjct: 3  RRCVLVAGILLAVVSLPTEALAQPLPARIDSLLQERRAAHAFWGVSIYDLEGDSLLYERN 62

Query: 47 PDHPWNPASLTKLMTAYVVFS 67
           D  + PAS  KL T      
Sbjct: 63 GDRGFLPASNQKLFTTAAALD 83


>gi|219920997|emb|CAQ76676.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 57/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A       
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWV 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|219920927|emb|CAQ76641.1| beta-lactamase [Klebsiella oxytoca]
          Length = 271

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|83815607|ref|YP_445208.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Salinibacter ruber DSM 13855]
 gi|83757001|gb|ABC45114.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Salinibacter ruber DSM 13855]
          Length = 477

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 15/81 (18%)

Query: 2  RQFLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENY 46
          R+ +++  + +     P  ++A+                      ++ D     ++ E  
Sbjct: 3  RRCVLVAGILLAVVSLPTEALAQPLPARIDSLLQERRAAHAFWGVSIYDLEGDSLLYERN 62

Query: 47 PDHPWNPASLTKLMTAYVVFS 67
           D  + PAS  KL T      
Sbjct: 63 GDRGFLPASNQKLFTTAAALD 83


>gi|119774879|ref|YP_927619.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella amazonensis
           SB2B]
 gi|119767379|gb|ABL99949.1| Serine-type D-Ala-D-Ala carboxypeptidase [Shewanella amazonensis
           SB2B]
          Length = 554

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%)

Query: 14  SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
                +L+I           +D  T  VI  +  +    PAS+ KL+ A   
Sbjct: 104 IAPAWYLAIKPKQTNVAVLAVDLKTQQVIISDNSERAMLPASVQKLLLALAA 155


>gi|315022681|gb|EFT35706.1| D-alanyl-D-alanine carboxypeptidase [Riemerella anatipestifer
          RA-YM]
          Length = 468

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 13/80 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTL-------------LDTNTGHVIAENYP 47
          M +FL+ I     S         + +K     L             +    G+ I E   
Sbjct: 3  MTKFLIFILTFFYSLGIAQSIKDKLDKATKAFLNSPKMYAANMSFYVADENGNFIYEYQG 62

Query: 48 DHPWNPASLTKLMTAYVVFS 67
          +   + AS  K+ TA     
Sbjct: 63 NKGLSTASTQKIFTAATALE 82


>gi|219920923|emb|CAQ76639.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920925|emb|CAQ76640.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920953|emb|CAQ76654.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESHPDVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|313200236|ref|YP_004038894.1| peptidoglycan glycosyltransferase [Methylovorus sp. MP688]
 gi|312439552|gb|ADQ83658.1| Peptidoglycan glycosyltransferase [Methylovorus sp. MP688]
          Length = 572

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 33/143 (23%), Gaps = 25/143 (17%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP---------------WNPASL 56
                     K     +LD  TG V+A        P++P               + P S 
Sbjct: 233 LAHAVEQFKAKAGAAIVLDARTGEVLAMANLPTYNPNNPVNMAGRSRNRAIVDTFEPGST 292

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K  TA               T I  +       P+           +    +++   S 
Sbjct: 293 LKPFTAAAALES---GHFTPDTHIQTAPGILRIGPATIH--DAHPQGMLTVAQVIQKSSN 347

Query: 117 NDIAVAIAESLCKTEKKFVQHMN 139
              A        +       HM 
Sbjct: 348 VGSAKMALTLEPQYLWGIYNHMG 370


>gi|253998166|ref|YP_003050229.1| peptidoglycan glycosyltransferase [Methylovorus sp. SIP3-4]
 gi|253984845|gb|ACT49702.1| Peptidoglycan glycosyltransferase [Methylovorus sp. SIP3-4]
          Length = 576

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 33/143 (23%), Gaps = 25/143 (17%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP---------------WNPASL 56
                     K     +LD  TG V+A        P++P               + P S 
Sbjct: 237 LAHAVEQFKAKAGAAIVLDARTGEVLAMANLPTYNPNNPVNMAGRSRNRAIVDTFEPGST 296

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K  TA               T I  +       P+           +    +++   S 
Sbjct: 297 LKPFTAAAALES---GHFTPDTHIQTAPGILRIGPATIH--DAHPQGMLTVAQVIQKSSN 351

Query: 117 NDIAVAIAESLCKTEKKFVQHMN 139
              A        +       HM 
Sbjct: 352 VGSAKMALTLEPQYLWGIYNHMG 374


>gi|37520164|ref|NP_923541.1| beta-lactamase [Gloeobacter violaceus PCC 7421]
 gi|35211157|dbj|BAC88536.1| gll0595 [Gloeobacter violaceus PCC 7421]
          Length = 355

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
              ++   +G  IA       ++ AS+ KL  A  +   +   +  LT  +T+
Sbjct: 67  GAAIVHVESGRAIALKGA-ERFSMASVYKLPIAIAILDMVDRGELDLTRKLTV 118


>gi|238792163|ref|ZP_04635798.1| Beta-lactamase [Yersinia intermedia ATCC 29909]
 gi|238728400|gb|EEQ19919.1| Beta-lactamase [Yersinia intermedia ATCC 29909]
          Length = 294

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 3/198 (1%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  KLM A  V    + +  +L+  IT  ++        +       MT+    
Sbjct: 69  QRFPFCSTFKLMLAAAVLGRSQSQPNLLSKHITYHESDLLAYAPITRKHLAQGMTVAELC 128

Query: 109 KLLIVKSANDIAVAIAESLC--KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              I  S N  A  + + L       +F + + + +  L         A         T 
Sbjct: 129 AATIQYSDNTAANLLIKQLGGLAMVNQFARSIGDQTFRLDRWEPELNTALPNDPRDTTTP 188

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF-TCASG 225
           A   A ++  +  D        Q+            T  A        G KTG     + 
Sbjct: 189 AAMAASVNKLVLGDALAAPQREQLALWLKGNTTGAATIRAGAPTDWVIGDKTGSGDYGTT 248

Query: 226 FNIVASAIQGDQSLIAVI 243
            ++          L+ V+
Sbjct: 249 NDVAVLWPAKGAPLVLVV 266


>gi|319652567|ref|ZP_08006682.1| hypothetical protein HMPREF1013_03296 [Bacillus sp. 2_A_57_CT2]
 gi|317395821|gb|EFV76544.1| hypothetical protein HMPREF1013_03296 [Bacillus sp. 2_A_57_CT2]
          Length = 474

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 49 HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
           P+  ASL+K MTA  V     + +  L  P 
Sbjct: 66 TPFPIASLSKSMTALAVLQLADKGQIDLDAPY 97


>gi|1326008|emb|CAA89922.1| unknown [Saccharomyces cerevisiae]
          Length = 983

 Score = 38.0 bits (86), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|292490618|ref|YP_003526057.1| peptidoglycan glycosyltransferase [Nitrosococcus halophilus Nc4]
 gi|291579213|gb|ADE13670.1| Peptidoglycan glycosyltransferase [Nitrosococcus halophilus Nc4]
          Length = 567

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 19/76 (25%), Gaps = 21/76 (27%)

Query: 25  TNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTKLMTAY 63
             +     +LD +TG V+A        P+                  + P S  K  T  
Sbjct: 241 NARAGSLVILDVDTGEVLAMVNRPSYNPNDRSQLKSHLYRNRAVTDLFEPGSTIKPFTIG 300

Query: 64  VVFSFLKEKKAMLTTP 79
           V     K         
Sbjct: 301 VALESGKYHPHTPIDT 316


>gi|221229298|gb|ABO61004.2| L2 beta-lactamase [Stenotrophomonas maltophilia]
          Length = 301

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 50/198 (25%), Gaps = 2/198 (1%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
            G  I  +  D  +   S  K +    V S     +  L T + I+          +   
Sbjct: 64  NGRRIGGHRQDERFPMCSTFKSLLVAHVLSLADAGRVSLDTRVPIAGKDLLSYAPVARRH 123

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSATHFMNA 155
            G  +T+ +  +  +  S N  A  +            F++   ++      +       
Sbjct: 124 VGKDLTVRDLCRGTLTTSDNTAANLLLEVVGGPSALTAFLRGQGDSITRNDRNEPDVNLF 183

Query: 156 HGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
                      A     L+     +  Q     Q     I  +       A        G
Sbjct: 184 VKGDPRDTTGPAAMATSLARFAVGNGLQPASRQQFADWLIDNQTGDACLRAGLGTRWRVG 243

Query: 216 MKTGFTCASGFNIVASAI 233
            KTG       N +A   
Sbjct: 244 DKTGSNGDDTRNDIAVLW 261


>gi|325067909|ref|ZP_08126582.1| D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al
           anine-endopeptidase [Actinomyces oris K20]
          Length = 463

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +++D  TG  + +        PAS  KL+TA+   S +    
Sbjct: 93  TASVVDVATGEELLDRSAASGVTPASTNKLLTAWAALSSMGPGH 136


>gi|268323877|emb|CBH37465.1| conserved hypothetical protein, beta-lactamase family [uncultured
           archaeon]
          Length = 414

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98
           G V      D P   AS+TKL TA  +    +E    L  P  ISK             K
Sbjct: 86  GQVPMTK--DTPIYIASITKLYTATAIMKLYEEGALSLDDP--ISKYLPTDLIRGIHVYK 141

Query: 99  GSTMTLDNALKLLIVKSANDI 119
               + +  +K L+  ++   
Sbjct: 142 EKDYSNEITIKQLLSHTSGIA 162


>gi|256862186|gb|ACV32628.1| beta-lactamase Tem170 [Escherichia coli]
          Length = 231

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 64/219 (29%), Gaps = 6/219 (2%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           P+  +   S  K++    V S +   +  L   I  S+N        +       MT+  
Sbjct: 5   PEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRE 64

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                I  S N  A  +  ++   ++   F+ +M +    L         A    +    
Sbjct: 65  LCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTT 124

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
             A     L   +  +        Q+       K       +          K+G     
Sbjct: 125 MPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERG 184

Query: 225 GFNIVASAIQGDQS-LIAVI--LGAL-DRNTRNKVSASL 259
              I+A+     +   I VI   G+    + RN+  A +
Sbjct: 185 SRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEI 223


>gi|255279728|ref|ZP_05344283.1| putative beta-lactamase [Bryantella formatexigens DSM 14469]
 gi|255269501|gb|EET62706.1| putative beta-lactamase [Bryantella formatexigens DSM 14469]
          Length = 477

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 54/216 (25%), Gaps = 20/216 (9%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L D ++G    E         ASL KL  A  ++  +       T  I  S +A   
Sbjct: 147 SVYLKDLSSGRT-MEINEHS-MESASLIKLYIAGAIYEQIALGNLQETDTILSSLDAMIT 204

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                        + +  ++ L  +S +        +       F               
Sbjct: 205 --------VSDNESSNVLVRQLCDESGDFQTGLAKVNDFIARYGFSST--------QQVN 248

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
                +  V       T+         +  +     H++  +   +  ++  N     G 
Sbjct: 249 GIADPSLWVSDGRVNMTSPADCGRLLEMIYNGELVSHFYSFRFETLLNRQQVNYKIPDGL 308

Query: 210 FLGADGM-KTGFTCASGFNIVASAIQGDQSLIAVIL 244
             G     KTG    +  +            I  I+
Sbjct: 309 PEGVHISHKTGEVDDTENDAAIIYTPYG-DYIFCIM 343


>gi|51892706|ref|YP_075397.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
 gi|51856395|dbj|BAD40553.1| putative beta-lactamase [Symbiobacterium thermophilum IAM 14863]
          Length = 261

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 18/59 (30%), Gaps = 1/59 (1%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE 88
             + D  TG   A   P   +  AS  K+  A  V      ++  L   I       +
Sbjct: 28 GVYVTDLATGRS-AGLNPMAEFYAASTIKVPIAMAVLWLADRRRISLDQTIAYQPEDYQ 85


>gi|42391699|dbj|BAD08689.1| beta-lactamase GES-4 [Klebsiella pneumoniae]
 gi|42543944|dbj|BAD11026.1| beta-lactamase GES-4 [Klebsiella pneumoniae]
          Length = 287

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRTAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|167036901|ref|YP_001664479.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115320|ref|YP_004185479.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855735|gb|ABY94143.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928411|gb|ADV79096.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 422

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 73/241 (30%), Gaps = 25/241 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D NTG    E      +  AS  K+   + +++ + + K      +  ++   E    +
Sbjct: 198 IDLNTGQT-FEINGYDSFIAASTYKVPLNFYLYTLITDGKIDPNMKVQYTQADYEGGAGS 256

Query: 94  STFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                  S  T+    +  I +S N  +  I          +++ M      +       
Sbjct: 257 IQADPVGSYYTIRELSRRSIEESDNIASNMIMR--IVGRDNYIKFMEKLGAYV------- 307

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                +    + T+ RDM+ +  +   D+         + +        N   +     G
Sbjct: 308 -----IPYSNNVTSPRDMS-MYMKNLLDYVNAHPDTAGELMYYLKNTIYNDRISYPIPDG 361

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRN--KVSASLLSMGFY 265
            +        ++  N  A      +  I  +L     G+ D       +  + ++   F 
Sbjct: 362 IEVAHKIGNLSNVVNDAAIVFHPTRPYILTVLANNVDGSDDSYAYTVIRQISKMV-YDFQ 420

Query: 266 N 266
           N
Sbjct: 421 N 421


>gi|295086650|emb|CBK68173.1| Alpha-mannosidase [Bacteroides xylanisolvens XB1A]
          Length = 855

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/273 (9%), Positives = 66/273 (24%), Gaps = 37/273 (13%)

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQ 136
                 S+          +             +  I+ +     +A  ++     K  + 
Sbjct: 270 DDDWHFSQEDIRVNLMWGSQVLQKIAQEVRTSENRIIMAEKMSVMAHLKNGYTCLKADMD 329

Query: 137 HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
               T        +  +  +G+          +           +    +    + +E  
Sbjct: 330 EAWRTLMMAQHHDSWIVPYNGL----------NRQGTWADQIKRWTDDTNRISDRIIE-- 377

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
                    ++  F    G + G        +  +     +  ++V+L     N+     
Sbjct: 378 --------ASIQNFDDLSGSQQGDINQQWVRLFNTLGVERKEPVSVLLSLESENSDFV-- 427

Query: 257 ASLLSM------GFYNKTDRKK---INYIIKDFYQQNLSNEVPNISEEVCTTQKEIINYN 307
             +          F      KK       I  F       +   + +++    +++    
Sbjct: 428 --ICDWKGKEIACFVESEGEKKRLFFEAEIPPFGYSTYCIKKKEVGKKIVAGSEKVSESK 485

Query: 308 TQMK----EAKDKESHFIDFEKITLLKNKITKK 336
              +       D      D  K  ++K+ I KK
Sbjct: 486 KVNEQEYVIENDMYKVVFDLSKGGVIKSLIAKK 518


>gi|227547903|ref|ZP_03977952.1| possible D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227080036|gb|EEI17999.1| possible D-alanyl-D-alanine carboxypeptidase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 200

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMT 61
           + D  TG  + E+ P+    PAS TKL+T
Sbjct: 81  ITDAATGETVFESAPNDALRPASSTKLLT 109


>gi|268611934|ref|ZP_06145661.1| hypothetical beta-lactamase precursor (penicillin-binding protein)
           [Ruminococcus flavefaciens FD-1]
          Length = 461

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 8/97 (8%)

Query: 26  NKLPYYTLLDTNTGHVIAEN------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  ++D ++  V+ EN        D P+   S++K  TA  +    ++ K  L +P
Sbjct: 52  IPAMAVAVVDKDS--VLFENTYGNCENADLPFIIGSMSKSFTAIAIMQLYEQGKIELESP 109

Query: 80  ITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
           I    + S++   N+   + +   L N    +     
Sbjct: 110 IDEYIDTSKWFDENTDHGRITVKDLLNHTSGITTYQT 146


>gi|222152213|ref|YP_002561388.1| exported protein [Streptococcus uberis 0140J]
 gi|222113024|emb|CAR40336.1| putative exported protein [Streptococcus uberis 0140J]
          Length = 428

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/199 (9%), Positives = 52/199 (26%), Gaps = 3/199 (1%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D     AS+ KL T Y V + ++  K  L   +  +   + +         G      
Sbjct: 222 NADKLMYSASIAKLATLYYVQNKIETGKTSLNQTLKYTDQVNHFKGDYDPSGSGKLPKTS 281

Query: 106 NALKLLIVKSANDIA---VAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           +     +      +A     +A ++           + +++   +S  ++     ++   
Sbjct: 282 DNENYTVDDLLKAVAQHSDNVATNILGYYLANQYDRDFSTQMTAISGINWDMEERMLSSK 341

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
                 +           +     +   +  +       +       +     +    + 
Sbjct: 342 AAANVMESIYYQNGPIVSYLTNTDFDNQRISKNIAVPVAHKIGDAYDYKHDVAIVYSDSP 401

Query: 223 ASGFNIVASAIQGDQSLIA 241
                   +A   D + IA
Sbjct: 402 FILSIFSENASYDDITAIA 420


>gi|169596763|ref|XP_001791805.1| hypothetical protein SNOG_01151 [Phaeosphaeria nodorum SN15]
 gi|160707369|gb|EAT90800.2| hypothetical protein SNOG_01151 [Phaeosphaeria nodorum SN15]
          Length = 556

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 13/36 (36%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           E   D  +  AS+TK  T   +    K     L  P
Sbjct: 91  EVNGDALYRIASITKTFTVLGILYQHKAGNLSLDDP 126


>gi|114764846|ref|ZP_01444028.1| penicillin-binding protein 2 [Pelagibaca bermudensis HTCC2601]
 gi|114542732|gb|EAU45755.1| penicillin-binding protein 2 [Roseovarius sp. HTCC2601]
          Length = 625

 Score = 38.0 bits (86), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 21/98 (21%), Gaps = 4/98 (4%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +A       + P S  K++TA                 +       E         K + 
Sbjct: 300 LASKTVQDAYPPGSTFKIVTALAALEA---GLIRPDETVYC-PGHMEIGSRRFHCWKRAG 355

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               N  + L             +       +  + + 
Sbjct: 356 HGHVNLEQSLRDSCDVYYYDLALKVGIDRIAEMGRKLG 393


>gi|323489176|ref|ZP_08094408.1| D-alanyl-D-alanine carboxypeptidase [Planococcus donghaensis
          MPA1U2]
 gi|323397063|gb|EGA89877.1| D-alanyl-D-alanine carboxypeptidase [Planococcus donghaensis
          MPA1U2]
          Length = 486

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 36 TNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +TG  I +++ D    PAS  KL TA   F 
Sbjct: 54 ADTGEQIYDHFGDTRLIPASNMKLFTAAAAFE 85


>gi|313902169|ref|ZP_07835578.1| beta-lactamase [Thermaerobacter subterraneus DSM 13965]
 gi|313467569|gb|EFR63074.1| beta-lactamase [Thermaerobacter subterraneus DSM 13965]
          Length = 378

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 59/230 (25%), Gaps = 21/230 (9%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P + AS  K+     V   +   +A +   I    +      +  
Sbjct: 150 DLQTGAT-WGINEREPIHAASTIKVPLVLYVNHQVAAGRARMDDRIVYEPDRDLTGGAGI 208

Query: 95  TF---KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATH 151
                  G + +L     L I  S N     +             ++    + LG     
Sbjct: 209 LQRDGFPGKSYSLRVLTNLSITISDNVTTNMLFRHF------GKDNVGEFMRRLGGEVIF 262

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                        +TARDM I    +     Q+         ++    +           
Sbjct: 263 -------PGGRRISTARDMGIYVEAVLDFARQHPLLGGRMLDDMGHAIFHVGLPGELPPD 315

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIAVIL--GALDRNTRNKVSASL 259
                K G       ++     +  +  +  +L  G  + +   +  A +
Sbjct: 316 VFVAHKEGDIEGVADDVGIVFGR--RPFVLAVLSKGVDNIDQGFEDIARI 363


>gi|148265527|ref|YP_001232233.1| Beta-lactamase [Geobacter uraniireducens Rf4]
 gi|146399027|gb|ABQ27660.1| Beta-lactamase [Geobacter uraniireducens Rf4]
          Length = 262

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/147 (8%), Positives = 35/147 (23%), Gaps = 7/147 (4%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETN----KLPYYTLLDTNTGHVIAENY---PDHPWNPASL 56
           F  ++   + S+ F   +          +    ++ +  G     +          PAS 
Sbjct: 7   FFALLLFTLTSSAFAEDAGIARLFKEKNIRGTIVISSLDGATTYSHNDERAATRMLPAST 66

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            K+    +           +       K  + +    +      +  +     L      
Sbjct: 67  FKIPNTLIALEEGAIADEKVLKWDGTDKGVAAWNKDQTLESAFKSSCIWFYQDLARRVGT 126

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSK 143
                 +A+      +   +  N   +
Sbjct: 127 ERYNAWLAKLQYGNGQAGPELSNFWLE 153


>gi|238790175|ref|ZP_04633951.1| Beta-lactamase [Yersinia frederiksenii ATCC 33641]
 gi|238721713|gb|EEQ13377.1| Beta-lactamase [Yersinia frederiksenii ATCC 33641]
          Length = 297

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 52/198 (26%), Gaps = 3/198 (1%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S  K M A  V    + +  +L   I   ++        +       MT+    
Sbjct: 69  QRFPFCSTFKFMLAAAVLGKSQTQPGLLDKHIKYHESDLLSYAPITRKNLAHGMTVSQLC 128

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  + +      +   F + + +    L         A         T 
Sbjct: 129 AATMQYSDNTAANLLIKELGGVASVNAFARSIGDQVFRLDRLEPDLNTALPNDPRDTTTP 188

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF-TCASG 225
           A     ++  +  D        Q+           NT  A        G KTG     + 
Sbjct: 189 AAMADSMNKLVLGDALPVAQREQLTLWLKGNTTGANTIQAGAPADWIVGDKTGSGDYGTT 248

Query: 226 FNIVASAIQGDQSLIAVI 243
            +I          ++ VI
Sbjct: 249 NDIAVLWPTQGAPIVLVI 266


>gi|311897753|dbj|BAJ30161.1| putative peptidase S13 family protein [Kitasatospora setae KM-6054]
          Length = 513

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 13/44 (29%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTK 58
                    +      + + D  TG  +       P  PAS TK
Sbjct: 117 TALGGTVQDKALGALNFAVADAATGEFLFGANEATPATPASTTK 160


>gi|167039606|ref|YP_001662591.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300915144|ref|ZP_07132459.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725068|ref|YP_003904819.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|166853846|gb|ABY92255.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|300888868|gb|EFK84015.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582129|gb|ADN55528.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
          Length = 422

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 73/241 (30%), Gaps = 25/241 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D NTG    E      +  AS  K+   + +++ + + K      +  ++   E    +
Sbjct: 198 IDLNTGQT-FEINGYDSFIAASTYKVPLNFYLYTLITDGKIDPNMKVQYTQADYEGGAGS 256

Query: 94  STFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                  S  T+    +  I +S N  +  I          +++ M      +       
Sbjct: 257 IQADPVGSYYTIRELSRRSIEESDNIASNMIMR--IVGRDNYIKFMEKLGAYV------- 307

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                +    + T+ RDM+ +  +   D+         + +        N   +     G
Sbjct: 308 -----IPYSNNVTSPRDMS-MYMKNLLDYVNAHPDTAGELMYYLKNTIYNDRISYPIPDG 361

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRN--KVSASLLSMGFY 265
            +        ++  N  A      +  I  +L     G+ D       +  + ++   F 
Sbjct: 362 IEVAHKIGNLSNVVNDAAIVFHPTRPYILTVLANNVDGSDDSYAYTVIRQISKMV-YDFQ 420

Query: 266 N 266
           N
Sbjct: 421 N 421


>gi|227498277|ref|ZP_03928427.1| beta-lactamase [Acidaminococcus sp. D21]
 gi|323142377|ref|ZP_08077208.1| beta-lactamase [Phascolarctobacterium sp. YIT 12067]
 gi|5596421|emb|CAB51471.1| beta-lactamase [Acidaminococcus fermentans]
 gi|226903739|gb|EEH89657.1| beta-lactamase [Acidaminococcus sp. D21]
 gi|322413140|gb|EFY04028.1| beta-lactamase [Phascolarctobacterium sp. YIT 12067]
          Length = 284

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 74/279 (26%), Gaps = 24/279 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPF--------LSIAETNKLPYYTL----LDTNTGHVIAENYPD 48
           M++F  +  +     +F          L++A+        +    +D   G  I    PD
Sbjct: 1   MKKFCFLFLIICGLMVFCLQDCQARQKLNLADLENKYNAVIGVYAVDMENGKKICYK-PD 59

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             ++  S  K+ TA  +          L      S          +       MTL    
Sbjct: 60  TRFSYCSTHKVFTAAELLRQKNTS--DLNEIRKFSAEDILSYAPITKDHVADGMTLAEIC 117

Query: 109 KLLIVKSANDIAVAIAESL--CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  I + +   +  K  ++++ + +     +       +        T 
Sbjct: 118 SASLRWSDNTAANLILQEIGGVENFKVALKNIGDKTTKPARNEPELNLFNPKDNRDTSTP 177

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF-TCASG 225
            + +  L   I  D         +               A          K+G     + 
Sbjct: 178 RQMVKNLQVYIFGDILSDDKKKLLIDWMSDNSITDTLIKAETPQGWKVIDKSGSGDYGAR 237

Query: 226 FNIVASAIQGDQSLIAVIL------GALDRNTRNKVSAS 258
            +I        + ++  I+       A   +     +A 
Sbjct: 238 NDIAVIYPPNRKPIVMAIMSRRTEKNAKSDDAMIAEAAK 276


>gi|310693479|gb|ADP05099.1| CTX-M-15 type extended-spectrum beta-lactamase [Salmonella
           enterica]
 gi|315076119|gb|ADT78700.1| CTX-M-15 type extended-spectrum beta-lactamase [Salmonella enterica
           subsp. enterica serovar Enteritidis]
          Length = 205

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 53/202 (26%), Gaps = 11/202 (5%)

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M A  V    + +  +L   + I K+        +      TM+L    
Sbjct: 1   ERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVNGTMSLAELS 60

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTA 167
              +  S N     +   +               +   L  T       +       T+ 
Sbjct: 61  AAALQYSDNVAMNKLIAHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSP 120

Query: 168 RDMAILSWR-----IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
           R MA             D  +      +KG             A        G KTG   
Sbjct: 121 RAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQ----AGLPASWVVGDKTGSGG 176

Query: 223 ASGFNIVASAIQGDQ-SLIAVI 243
               N +A     D+  LI V 
Sbjct: 177 YGTTNDIAVIWPKDRAPLILVT 198


>gi|223469166|gb|ACM89982.1| class A beta-lactamase [Burkholderia pseudomallei]
          Length = 295

 Score = 38.0 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLP---------------YYTLLDTNTGHVIAENYPD 48
            +  I+  ++    P    A+                     +  LDT TG  I  +  D
Sbjct: 11  LVAAISTPLIGACAPLRGQAKNVAAAERQLRELESTFDGRLGFVALDTATGARI-AHRGD 69

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S +K+M    V +    + A+L   I  +K         +    G+ M++    
Sbjct: 70  ERFPFYSTSKMMLCAAVLARSAGEPALLQRRIAYAKGDLIRYSPITEQHVGAGMSVAELC 129

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
              +  S N  A  +       +T   + + + + +  L         A    +    T 
Sbjct: 130 AATLQYSDNTAANLLIALLGGPQTVTAYARSIGDATFRLDRREPELNTALPGDERDTTTP 189

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF 226
           A   A +   +  D        Q+    +  K       A          KTG       
Sbjct: 190 AAMAASVHRLLVGDALGAAQRAQLNAWMLGNKTGDARIRAGVPADWRVADKTGTGDYGTA 249

Query: 227 NIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
           N +  A   ++  ++ ++   +   +   R+ 
Sbjct: 250 NDIGVAYPPNRAPIVFIVYTTMRNPNAQARDD 281


>gi|305407951|dbj|BAJ15908.1| beta-lactamase penicillin binding protein [Rhodococcus opacus]
          Length = 317

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 54/214 (25%), Gaps = 4/214 (1%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           ++  TG V   +  D  +   S  K   +  V    ++    L   + I           
Sbjct: 74  VNPATGEV-YSHRGDERFAMCSTFKAYASAAVLRKTEDGSTSLDKTVVIEPGDLVENSPV 132

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATH 151
           +    G+ MTL    +  + +S N     +   +   +      + + + S  L    T 
Sbjct: 133 TAAAAGTPMTLAQIAEAALTQSDNTAGNYLLREIGGPQAVTDLARDVGDGSTRLDRWETE 192

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T           +  D        Q+       K       A     
Sbjct: 193 LNTAFRDDPRDTTTPNGLAQGFRALLLGDALDTASRDQLLEWMRASKTSDKRMRAGLPTG 252

Query: 212 GADGMKTGFTCASGFNIVASAIQ-GDQSLIAVIL 244
                KTG       N    A       ++  IL
Sbjct: 253 WTATDKTGGGGFGTANDAGVAWSPDGAPIVLAIL 286


>gi|149912393|ref|ZP_01900940.1| beta-lactamase [Moritella sp. PE36]
 gi|149804526|gb|EDM64611.1| beta-lactamase [Moritella sp. PE36]
          Length = 84

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 11/74 (14%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
          F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6  FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53 PASLTKLMTAYVVF 66
            S  K++    V 
Sbjct: 66 MMSTFKVLLCGAVL 79


>gi|153840447|ref|ZP_01993114.1| beta-lactamase TEM [Vibrio parahaemolyticus AQ3810]
 gi|149745890|gb|EDM57020.1| beta-lactamase TEM [Vibrio parahaemolyticus AQ3810]
          Length = 98

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 11/74 (14%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
          F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6  FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53 PASLTKLMTAYVVF 66
            S  K++    V 
Sbjct: 66 MMSTFKVLLCGAVL 79


>gi|52841846|ref|YP_095645.1| beta-lactamase AmpS [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52628957|gb|AAU27698.1| beta-lactamase AmpS [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 280

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 49/203 (24%), Gaps = 11/203 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI--AENYPDHPWNPASLTK 58
           M++ ++ +   +L  +    +                   V+    N  D  ++PAS  K
Sbjct: 15  MKKIIIFLCTGLLFCV-STWAQGTCFLAK-------ENQTVLKREGNDCDQRYSPASTFK 66

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +  + + F     K   L       K    Y       +   T   D+ +      +   
Sbjct: 67  IALSLMGFDSGILKD-ELHPEWPYKKEYELYLNVWKYPQNPHTWIRDSCVWYSQALTRQL 125

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
                   +            +  +N GL+     ++  +         + +      + 
Sbjct: 126 GMKRFKGYVDAFHYGNQDVSGDRGQNNGLTHAWLSSSLSISPTEQIQFLQKIIYKKLPVS 185

Query: 179 TDFPQYMHYFQIKGLEIKGKKYP 201
                             G K  
Sbjct: 186 QKAYIMTKNIMYIQELPGGWKLY 208


>gi|328881793|emb|CCA55032.1| Cell division protein FtsI [Streptomyces venezuelae ATCC 10712]
          Length = 589

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 26/151 (17%)

Query: 30  YYTLLDTNTGHVIAENYP---------------------DHPWNPASLTKLMTAYVVFSF 68
           Y  + +T TG V+A                            + P S +K+M+   V   
Sbjct: 249 YVVVQNTRTGEVLAMANAPGFDPNDLSAANAAAMGNAALQDAYEPGSTSKVMSMAAVLEE 308

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
               KA   T +T+                    T    L  ++ KS+N   +     L 
Sbjct: 309 ---GKATPDTHVTVPNRLH--RGDRLFKDDVDHETWYLTLNGVLAKSSNIGTILATGQLG 363

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
            T+ +  + +++  +  G+ +   ++  G  
Sbjct: 364 ATQAESNKVLHSYLRKFGMGSPTGLDYPGET 394


>gi|227503274|ref|ZP_03933323.1| possible peptidoglycan glycosyltransferase [Corynebacterium
           accolens ATCC 49725]
 gi|227075777|gb|EEI13740.1| possible peptidoglycan glycosyltransferase [Corynebacterium
           accolens ATCC 49725]
          Length = 621

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 23/93 (24%), Gaps = 27/93 (29%)

Query: 31  YTLLDTNTGHVIAENYPDH------------------------PWNPASLTKLMTAYVVF 66
             +LD  TG V+A    D                         P+ P S+ K++TA    
Sbjct: 280 AVVLDAATGQVLAMANTDTVDPNKNIEDQLKEGKDFENRSISHPYEPGSVAKIVTAAAAL 339

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
                          +  +      + +     
Sbjct: 340 QE---GITTPDEVHQVPGSIDMAGVTVNDAWPH 369


>gi|307292716|ref|ZP_07572562.1| Beta-lactamase [Sphingobium chlorophenolicum L-1]
 gi|306880782|gb|EFN11998.1| Beta-lactamase [Sphingobium chlorophenolicum L-1]
          Length = 309

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 4/219 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L+D+  G +I     D  +   S  K   A  V S  +  K  L   I  +K        
Sbjct: 62  LVDSK-GALILGFNRDERFAMCSTFKAPLAAAVLSGAEGNKFGLEGQIGFTKADLLDHAP 120

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA--T 150
                          L    V+ +++ A  +   +    + F +++     N+       
Sbjct: 121 VVKKNARRGRMSMEELAAAAVEVSDNSAANLLLPMIGGPEGFTRYVRAHGDNVTRLDRTE 180

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
             +N +        T+   MA L  R+     +     +++G         N   A    
Sbjct: 181 PALNENAEGDERDTTSPAAMAGLMRRLIFTDLKPESAARLRGWLNASTTGGNRIKAGLPK 240

Query: 211 LGADGMKTG-FTCASGFNIVASAIQGDQSLIAVILGALD 248
               G KTG    A     +  A  G++ ++A+ L    
Sbjct: 241 DWTSGSKTGTCGTAYNDVALVKAPSGEEYILAIYLDRPT 279


>gi|259563902|gb|ACW83063.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
 gi|259563905|gb|ACW83065.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
          Length = 127

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 17/97 (17%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             D  +   S +K+M A  V    + +  +L   + I
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEI 100


>gi|212531167|ref|XP_002145740.1| D-aminoacylase, putative [Penicillium marneffei ATCC 18224]
 gi|210071104|gb|EEA25193.1| D-aminoacylase, putative [Penicillium marneffei ATCC 18224]
          Length = 414

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          PD     AS TKLMTA      ++     L  
Sbjct: 57 PDTTMWIASCTKLMTAISAMQCVERGLLKLDE 88


>gi|305667706|ref|YP_003863993.1| beta-lactamase [Maribacter sp. HTCC2170]
 gi|88709756|gb|EAR01989.1| beta-lactamase precursor [Maribacter sp. HTCC2170]
          Length = 547

 Score = 38.0 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 40/150 (26%), Gaps = 30/150 (20%)

Query: 1   MRQF-LVIIAMAMLSNIFPFLSIAE--------------TNKLPYYTLLDTNTGHVIAEN 45
           M++  ++ + MA+  +  P  + ++                      +     G V+   
Sbjct: 1   MKKTTILFLFMALAISSIPVFAQSQEQQYDALLKDTYTKDTPGISALVY--KNGKVLYRK 58

Query: 46  -------------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
                         P++ +   S+TK  TA  +   +++ K  L   IT           
Sbjct: 59  AFGMANLEYDIPMKPENVFEIGSITKQFTAVSILMLMEQGKLALEDEITKYIPDYPTKGK 118

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
             T       T        +       A  
Sbjct: 119 KITVHHLLNHTSGIKSYTSMRSFIATAATD 148


>gi|56707801|ref|YP_169697.1| Beta-lactamase class A [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670272|ref|YP_666829.1| Beta-lactamase class A [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134302015|ref|YP_001121984.1| beta-lactamase [Francisella tularensis subsp. tularensis WY96-3418]
 gi|254370299|ref|ZP_04986304.1| beta-lactamase class A [Francisella tularensis subsp. tularensis
           FSC033]
 gi|56604293|emb|CAG45314.1| Beta-lactamase class A [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320605|emb|CAL08697.1| Beta-lactamase class A [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049792|gb|ABO46863.1| beta-lactamase [Francisella tularensis subsp. tularensis WY96-3418]
 gi|151568542|gb|EDN34196.1| beta-lactamase class A [Francisella tularensis subsp. tularensis
           FSC033]
 gi|282158975|gb|ADA78366.1| beta-lactamase [Francisella tularensis subsp. tularensis NE061598]
          Length = 294

 Score = 37.6 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 52/212 (24%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +       M
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQIM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFILSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N   A        G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILDKKHRLMFKQWLIASNTSNNRIAAEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|300783228|ref|YP_003763519.1| beta-lactamase class C [Amycolatopsis mediterranei U32]
 gi|299792742|gb|ADJ43117.1| beta-lactamase class C [Amycolatopsis mediterranei U32]
          Length = 475

 Score = 37.6 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                 AS++K MTA+ V    +  +  L  P
Sbjct: 64 ASTRLPIASVSKSMTAFAVLQLAEAGRLGLDQP 96


>gi|167839554|ref|ZP_02466238.1| class A beta-lactamase precursor [Burkholderia thailandensis
           MSMB43]
          Length = 294

 Score = 37.6 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 73/229 (31%), Gaps = 7/229 (3%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
             LDT TG  I  +  D  +   S  K+M +  V +   +  A+L   I  +K       
Sbjct: 53  VALDTATGARI-AHRADERFPFCSTFKMMLSAAVLARSADDAALLQRRIPYAKRDLVRYS 111

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSA 149
             +    G+ MT+       +  S N  A  + +     +    + + + + +  L    
Sbjct: 112 PITERHVGAGMTVAELCAATLQYSDNTAANLLIDLLGGPQAVTAYARSIGDATFRLDRRE 171

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T    A    +    T A   A +   +  D        Q+    +  K       A   
Sbjct: 172 TELNTAIPGDERDTTTPAAMAASVRRLLAGDALGAAQRAQLNAWMLGNKTGDARLRAGVP 231

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVI---LGALDRNTRNK 254
                  KTG       N +  A   D+  ++ V+   + + +   R+ 
Sbjct: 232 AGWRVADKTGTGDYGTGNDIGVAYPPDRAPIVFVVYTTMRSQNAPVRDD 280


>gi|254374409|ref|ZP_04989891.1| beta-lactamase class A [Francisella novicida GA99-3548]
 gi|151572129|gb|EDN37783.1| beta-lactamase class A [Francisella novicida GA99-3548]
 gi|332678298|gb|AEE87427.1| Beta-lactamase [Francisella cf. novicida Fx1]
          Length = 294

 Score = 37.6 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 53/212 (25%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +      TM
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQTM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFILSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N   A        G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILDKKHRLMFKQWLIASNTSNNRIAAEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|254424611|ref|ZP_05038329.1| hypothetical protein S7335_4771 [Synechococcus sp. PCC 7335]
 gi|196192100|gb|EDX87064.1| hypothetical protein S7335_4771 [Synechococcus sp. PCC 7335]
          Length = 504

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 2/139 (1%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
                  +PASL KL  A  V   +  +K  L + + I           +T +      L
Sbjct: 228 KGEQLLASPASLIKLPIAIAVLDKIHTEKLDLNSKLYIDPQNFTENAIGATIEVDKEYPL 287

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              +  +I +S N     + + + +  +   + +                   +  +   
Sbjct: 288 VQVIDRMISESNNIATNQLIDYVGR--EGINKTLTARGYQDTFVDYKLAGNRILPPNPGT 345

Query: 165 TTARDMAILSWRIKTDFPQ 183
            + R       R+  D  +
Sbjct: 346 QSNRITTNDVTRMMVDTYR 364


>gi|223936735|ref|ZP_03628645.1| beta-lactamase [bacterium Ellin514]
 gi|223894586|gb|EEF61037.1| beta-lactamase [bacterium Ellin514]
          Length = 279

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 72/265 (27%), Gaps = 26/265 (9%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           +LD  +     +   +  +  AS  K+     V+      K  LT    I K        
Sbjct: 27  VLDLTSNDR-FDINAEMVFPQASAIKIPVLMEVYKQAHAGKFSLTDTRRIEKQDKTSGSG 85

Query: 93  NSTF--KKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                      MT+ +   L+I+ S N     + + +  T       +N T  +LG   T
Sbjct: 86  ILFELGDGTVQMTIHDLCILMILISDNTATNLLIDLVGITN------VNQTLNSLGFEQT 139

Query: 151 HFMNAHGVV------QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN 204
                               T A  + IL    K +F        I  +    KK   TN
Sbjct: 140 RLQRRMMDAAASLRGDENLSTPAEGVRILELLHKGEFINRSICDDILAI---LKKPKPTN 196

Query: 205 WAVGTFLG-ADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSAS----- 258
              G   G     K G             ++  +  I VI+           +       
Sbjct: 197 LTAGLPDGTVVATKPGNISGVATEWAIVYLKD-RPYIVVIMENYGVEHDAPDAMKAISQT 255

Query: 259 LLSMGFYNKTDRKKINYIIKDFYQQ 283
           L    F   +   K    +    Q+
Sbjct: 256 LHEY-FARLSRATKYGAYVAPSVQR 279


>gi|288904235|ref|YP_003429456.1| hypothetical protein GALLO_0012 [Streptococcus gallolyticus UCN34]
 gi|306832495|ref|ZP_07465647.1| beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325977212|ref|YP_004286928.1| beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|288730960|emb|CBI12504.1| conserved hypothetical exported protein [Streptococcus gallolyticus
           UCN34]
 gi|304425395|gb|EFM28515.1| beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325177140|emb|CBZ47184.1| beta-lactamase [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 428

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             D     AS+ KL T Y V   L++        
Sbjct: 222 NADTVMYSASVAKLATLYYVEEKLQDGTISANDT 255


>gi|50954234|ref|YP_061522.1| D-alanyl-D-alanine carboxypeptidase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50950716|gb|AAT88417.1| D-alanyl-D-alanine carboxypeptidase [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 472

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTK 58
           +++  TG V+ +     P   AS+ K
Sbjct: 98  VVNAKTGEVLFDRNGSKPAPTASVLK 123


>gi|256751507|ref|ZP_05492384.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749591|gb|EEU62618.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 422

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 73/241 (30%), Gaps = 25/241 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D NTG    E      +  AS  K+   + +++ + + K      +  ++   E    +
Sbjct: 198 IDLNTGQT-FEINGYDSFIAASTYKVPLNFYLYTLITDGKIDPNMKVQYTQADYEGGAGS 256

Query: 94  STFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                  S  T+    +  I +S N  +  I          +++ M      +       
Sbjct: 257 IQADPVGSYYTIRELSRRSIEESDNIASNMIMR--IVGRDNYIKFMEKLGAYV------- 307

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                +    + T+ RDM+ +  +   D+         + +        N   +     G
Sbjct: 308 -----IPYSNNVTSPRDMS-MYMKNLLDYVNAHPDTAGELMYYLKNTIYNDRISYPIPDG 361

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRN--KVSASLLSMGFY 265
            +        ++  N  A      +  I  +L     G+ D       +  + ++   F 
Sbjct: 362 IEVAHKIGNLSNVVNDAAIVFHPTRPYILTVLANNVDGSDDSYAYTVIRQISKMV-YDFQ 420

Query: 266 N 266
           N
Sbjct: 421 N 421


>gi|262283168|ref|ZP_06060935.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262261420|gb|EEY80119.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 357

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 4/114 (3%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   + E K  +     I++   EY   + 
Sbjct: 124 DLTTGQT-FAVNDTQPMTAGSTYKLPLNMLVVDEVAEGKLSMEERFDITQTHFEYQGEHD 182

Query: 95  TFKKGST--MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
            +       M++ +  +  +V S N  A A+AE L   +K + +  +   ++ G
Sbjct: 183 NYVAAFNGAMSIPDMQEYSLVYSENTPAYALAERLGGMDKAY-EMFSRYGQSKG 235


>gi|227505938|ref|ZP_03935987.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium striatum ATCC
           6940]
 gi|227197460|gb|EEI77508.1| D-alanyl-D-alanine carboxypeptidase [Corynebacterium striatum ATCC
           6940]
          Length = 424

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++DT TG V+ +     P  PAS TK+
Sbjct: 84  VIDTTTGEVVWDRDAARPLTPASSTKV 110


>gi|311826257|emb|CBX55910.1| putative CTX-M-15 extended spectrum beta-lactamase [Escherichia
           coli]
          Length = 102

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 32/97 (32%), Gaps = 17/97 (17%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             D  +   S +K+M A  V    + +  +L     I
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRAEI 100


>gi|224370590|ref|YP_002604754.1| MrdA [Desulfobacterium autotrophicum HRM2]
 gi|223693307|gb|ACN16590.1| MrdA [Desulfobacterium autotrophicum HRM2]
          Length = 617

 Score = 37.6 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 23/103 (22%), Gaps = 36/103 (34%)

Query: 27  KLPYYTLLDTNTGHVI-------AENY-----------------PDHPW---------NP 53
           K      +D + G ++        +                   PD P           P
Sbjct: 257 KAGAVVAMDPSNGDILVMASSPSFDQNDFIGGISSKKWKKLLADPDRPMSNKCIQGEYPP 316

Query: 54  ASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF 96
           AS  K++TA             L T    S            +
Sbjct: 317 ASTYKILTAIAGLEE---GVVDLNTRHYCSGQYKFGNRIYRCW 356


>gi|40645554|dbj|BAD06399.1| beta-lactamase GES-3 [Klebsiella pneumoniae]
          Length = 287

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 54/219 (24%), Gaps = 14/219 (6%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP-P 91
           ++D   G ++A +     +   S  K   A +VF  +          ++   +      P
Sbjct: 43  IVDPQ-GEIVAGHRTAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVKWSP 101

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG--LSA 149
           +   F     MT+  A +  +  S N     +   +          M    + +G  +S 
Sbjct: 102 ATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREI-----GGPAAMTQYFRKIGDSVSR 156

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTN----- 204
                                 I   R                  I+     N       
Sbjct: 157 LDRKEPEMGDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATL 216

Query: 205 WAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVI 243
            A        G KTG     G N +      ++     +
Sbjct: 217 RAGFPKDWVVGEKTGTCANGGRNDIGFFKAQERDYAVAV 255


>gi|312891487|ref|ZP_07751003.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Mucilaginibacter
          paludis DSM 18603]
 gi|311296025|gb|EFQ73178.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Mucilaginibacter
          paludis DSM 18603]
          Length = 443

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          L D     ++ E   D  + PAS TKL T Y     
Sbjct: 52 LYDPEKKKMVYELNADKYFIPASNTKLYTFYACLQM 87


>gi|157151312|ref|YP_001450876.1| hypothetical protein SGO_1598 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076106|gb|ABV10789.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 357

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 5/138 (3%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLK 70
           +   +  +L+ A   +        D  TG          P    S  KL    +V   + 
Sbjct: 100 LTQVVQAYLAEAGIEQSQIAFSYKDLTTGQT-FAMNDTQPMTAGSTYKLPLNMLVVDEVA 158

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGST--MTLDNALKLLIVKSANDIAVAIAESLC 128
           E K  +     I++   EY   +  +       M++ +  +  +V S N  A A+AE L 
Sbjct: 159 EGKLSMEERFDITQTHFEYQGEHDNYVAAFNGAMSIPDMQEYSLVYSENTPAYALAERLG 218

Query: 129 KTEKKFVQHMNNTSKNLG 146
             +K + +  +   ++ G
Sbjct: 219 GMDKAY-EMFSRYGQSKG 235


>gi|295822193|gb|ADG36750.1| extended-spectrum class A beta-lactamase [Rahnella sp. 344-Salad]
          Length = 218

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 58/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   ++++++        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLTRSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|296327729|ref|ZP_06870269.1| beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296155167|gb|EFG95944.1| beta-lactamase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 268

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 64/208 (30%), Gaps = 13/208 (6%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGST 101
                      AS+ KL+    +   + E    L+  ITI+                G  
Sbjct: 39  FSINGSEKVLSASMIKLLILAELMKKVSENNFSLSDTITITNFMKTEGDGVLKELNAGHH 98

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ- 160
            TL     L+I+ S N     + + L       ++++N   K LGL  T         + 
Sbjct: 99  FTLKELATLMIIVSDNQATNILIDFL------GMENINFLGKELGLRETFLERRMMDAEA 152

Query: 161 ----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGM 216
               + +YT+A D+++L   +               L+I  ++                 
Sbjct: 153 SKNGYDNYTSADDLSLLLK-LIYQEKLINKETSQLMLDILLRQQQGERLQRYLPPDIKIA 211

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVIL 244
                  +  N       G++  I V+L
Sbjct: 212 HKCGDLDNLENDGGIIWLGNKIYILVVL 239


>gi|253997375|ref|YP_003049439.1| peptidoglycan glycosyltransferase [Methylotenera mobilis JLW8]
 gi|253984054|gb|ACT48912.1| Peptidoglycan glycosyltransferase [Methylotenera mobilis JLW8]
          Length = 574

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 35/128 (27%), Gaps = 24/128 (18%)

Query: 17  FPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP---------------WNPASL 56
                           +LD  TG V+A        P++P               + P S 
Sbjct: 236 LTKAVEKFKANAGAAVVLDAKTGEVLAMVNVPTYNPNNPINIQGKTRNRAITDIFEPGST 295

Query: 57  TKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN-STFKKGSTMTLDNALKLLIVKS 115
            K +T           K    T I  +       P+          M++   ++      
Sbjct: 296 MKTVTVAAALE---TGKYTPDTMIQTAPGYMSIGPATIHDAHPHGLMSVSEVIQKSSNVG 352

Query: 116 ANDIAVAI 123
           +  +A+++
Sbjct: 353 SAKMALSL 360


>gi|94987378|ref|YP_595311.1| Zn-dependent peptidase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731627|emb|CAJ54990.1| predicted Zn-dependent peptidases [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 909

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 94/328 (28%), Gaps = 22/328 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL- 59
           M++ L  I    L  +F    + +  +     +    T  ++ E           +T+L 
Sbjct: 18  MKKRLFFIFSIFLLGVFMATYMVQPLEATSSII---KTNDILPE-NLTKKHPI--VTRLC 71

Query: 60  --MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
             +T  V+        +      T S          S   +        +     +    
Sbjct: 72  NGLTVLVLEDNRFPLVSTRLYVHTGSAYEKPEQSGISHILEHMVFKGTESRPNATISQEV 131

Query: 118 DIAVAIAESLCKTEKKFVQ-HMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           +       +    +    +  M ++   LG+     M  H ++      + + + +    
Sbjct: 132 EAVGGYLNAATSYDYTVYKTDMPSSQWKLGMDVVRDMAFHPMLDPQDLESEKKVILAELA 191

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
              D P    + ++    + G  Y      +  +       T            +     
Sbjct: 192 RGEDNPHSFAFKKLLAKSLAGTPYS---RPIIGYPETINAVTSQDLKDYI----ATHYQP 244

Query: 237 QSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEVPNISEEV 296
           Q ++ V++G +  N   + +  L    F    + + I   +  + ++    E       +
Sbjct: 245 QDMLLVVVGDVKANEVLQEANHL----FSKYNNTQNIILPLPYYAEELPLKEGQGTVTII 300

Query: 297 CTTQKE-IINYNTQMKEAKDKESHFIDF 323
             T  +  +     +  A + ES+ +D 
Sbjct: 301 PGTWNKIYLTAAVPVSNALNIESNTLDV 328


>gi|332557768|ref|ZP_08412090.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides WS8N]
 gi|38174788|emb|CAE53835.1| Pbp2 protein [Rhodobacter sphaeroides]
 gi|332275480|gb|EGJ20795.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides WS8N]
          Length = 648

 Score = 37.6 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/147 (9%), Positives = 27/147 (18%), Gaps = 37/147 (25%)

Query: 26  NKLPYYTLLDTNTGHVIA------------------------ENYPDHPW---------N 52
            +      +D  TG ++A                              P           
Sbjct: 265 TESAAAVAIDVITGDILAICSSPSFDPNLFVRGISFKDYAALTENDHRPLANKAVQGAYP 324

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           P S  K++TA               T +       E         K     + +  + L 
Sbjct: 325 PGSTFKMVTALAALEA---GVITPETSVYC-PGHYETGGRRFHCWKRGGHGMVSLSRSLS 380

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMN 139
                               +  + + 
Sbjct: 381 ESCDVYYYDIAQRVGIDKIAEMGRRLG 407


>gi|300782252|ref|YP_003762543.1| alanine rich lipoprotein LppW [Amycolatopsis mediterranei U32]
 gi|299791766|gb|ADJ42141.1| putative alanine rich lipoprotein LppW [Amycolatopsis mediterranei
           U32]
          Length = 298

 Score = 37.6 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 5/76 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS-----FLKEKKAMLTTPITISK 84
              + D   G V+     D  +  ASL KL+ A             ++    +     S+
Sbjct: 97  SAVVFDRERGAVVTSVRADRAYTSASLVKLLIALSALEQGGPVADVQRMLSRSDDDLASR 156

Query: 85  NASEYPPSNSTFKKGS 100
             + Y   +      +
Sbjct: 157 FWTAYGGPSIVTHWTT 172


>gi|71909116|ref|YP_286703.1| peptidoglycan synthetase FtsI [Dechloromonas aromatica RCB]
 gi|71848737|gb|AAZ48233.1| peptidoglycan synthetase FtsI [Dechloromonas aromatica RCB]
          Length = 582

 Score = 37.6 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 21/80 (26%)

Query: 12  MLSNIFPFLSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP---------------- 50
           +  +           K     ++D  TG V+A        P++                 
Sbjct: 242 LAYSQLKNAVETNNAKAGGAIVIDARTGEVLALANWPTYNPNNRERLSGAQLRNRAITDT 301

Query: 51  WNPASLTKLMTAYVVFSFLK 70
           + P S+ K  TA +     K
Sbjct: 302 FEPGSVMKPFTAALALEKGK 321


>gi|113475897|ref|YP_721958.1| hypothetical protein Tery_2257 [Trichodesmium erythraeum IMS101]
 gi|110166945|gb|ABG51485.1| hypothetical protein Tery_2257 [Trichodesmium erythraeum IMS101]
          Length = 434

 Score = 37.6 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 69/233 (29%), Gaps = 22/233 (9%)

Query: 46  YPDHP-WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
             + P  + ASL K+  A  +   + ++   L TP+ +S+       S    +      L
Sbjct: 208 NGNKPPASAASLIKVPIAVALMQKVSKENISLDTPVYVSRGNFTEDGSK--IRARKRYPL 265

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
              +  +I  S+N     + + L +        +N   K+ G             +    
Sbjct: 266 KTLVGEMIDHSSNIATNQLIDYLGQPY------INKVLKDDGYKIIRVNYKLMGNRIRPK 319

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG--------ADGM 216
              R    L+    TD    ++  +    ++  +   N    +  + G          G 
Sbjct: 320 NPGRGRNRLTSNELTDMMVSIYNNEYPNSDVLIEALANQKDRLLGYAGLEKLPEAKWLGE 379

Query: 217 KTGFTCASGFNIVASAIQGDQSLIAVIL---GALDRNTRNKVSASLLSMGFYN 266
           KTG    +    +       Q  +  ++   G  D   R      L      N
Sbjct: 380 KTGENSRALGTTLG-FSINGQVYVMTVIDNRGGRDPQIRAS-VNKLAKYLIDN 430


>gi|116750145|ref|YP_846832.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Syntrophobacter fumaroxidans MPOB]
 gi|116699209|gb|ABK18397.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Syntrophobacter fumaroxidans MPOB]
          Length = 430

 Score = 37.6 bits (85), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 40 HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           VI E   + P  PASL K++T+Y    +LK + 
Sbjct: 8  KVIWEFRSEEPLVPASLVKVLTSYAALKYLKPQY 41


>gi|269836702|ref|YP_003318930.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
 gi|269785965|gb|ACZ38108.1| beta-lactamase [Sphaerobacter thermophilus DSM 20745]
          Length = 304

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 3/43 (6%)

Query: 35 DTNTG-HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAML 76
          D +TG  V+    PD     AS  K +  Y ++  +   +   
Sbjct: 29 DLDTGTEVMY--NPDVVVPTASTMKTVLLYELYRQVDAGQIDP 69


>gi|254372958|ref|ZP_04988447.1| hypothetical protein FTCG_00530 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570685|gb|EDN36339.1| hypothetical protein FTCG_00530 [Francisella novicida GA99-3549]
          Length = 294

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 53/212 (25%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +      TM
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQTM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFVLSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N   A        G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILDKKHRLMFKQWLIASNTSNNRIAAEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|256862188|gb|ACV32629.1| beta-lactamase Tem171 [Escherichia coli]
          Length = 222

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 60/211 (28%), Gaps = 3/211 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           P+  +   S  K++    V S +   +  L   I  S+N        +       MT+  
Sbjct: 5   PEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRE 64

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                I  S N  A  +  ++   ++   F+ +M +    L         A    +    
Sbjct: 65  LCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTT 124

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCAS 224
             A     L   +  +        Q+       K       +          K+G     
Sbjct: 125 MPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERG 184

Query: 225 GFNIVASAIQGDQS-LIAVILGALDRNTRNK 254
              I+A+     +   I VI     + T ++
Sbjct: 185 SRGIIAALGPDGKPSRIVVIYTTGSQATMDE 215


>gi|149912388|ref|ZP_01900937.1| beta-lactamase [Moritella sp. PE36]
 gi|149804534|gb|EDM64617.1| beta-lactamase [Moritella sp. PE36]
          Length = 75

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 11/68 (16%)

Query: 4  FLVIIAMAMLSNIFPFLSIAETN----KLP-------YYTLLDTNTGHVIAENYPDHPWN 52
          F V +     +   P  +  ET                Y  LD N+G ++    P+  + 
Sbjct: 6  FRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFP 65

Query: 53 PASLTKLM 60
            S  K++
Sbjct: 66 MMSTFKVL 73


>gi|148264898|ref|YP_001231604.1| peptidoglycan glycosyltransferase [Geobacter uraniireducens Rf4]
 gi|146398398|gb|ABQ27031.1| peptidoglycan glycosyltransferase [Geobacter uraniireducens Rf4]
          Length = 636

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 28/94 (29%), Gaps = 33/94 (35%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI-AENYP------------------- 47
           + + + S++      A  +K     ++D N+G ++   + P                   
Sbjct: 242 LVLTIDSDLQKQTEQAFGDKAGAAVVMDVNSGEILAFSSNPGFDPSLFTGRMSPEQWKSY 301

Query: 48  --DHP-----------WNPASLTKLMTAYVVFSF 68
             D             + P S  K++TA      
Sbjct: 302 LEDKRHPLENKALKGQYPPGSTFKVITALAGLEE 335


>gi|311334861|emb|CBX55128.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334864|emb|CBX55130.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334867|emb|CBX55132.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334870|emb|CBX55134.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334873|emb|CBX55136.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334879|emb|CBX55160.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334882|emb|CBX55162.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311334885|emb|CBX55164.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311826248|emb|CBX55904.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311826251|emb|CBX55906.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
 gi|311826254|emb|CBX55908.1| CTX-M-15 extended spectrum beta-lactamase [Escherichia coli]
          Length = 98

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 17/94 (18%)

Query: 1  MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
          +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6  LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S +K+M A  V    + +  +L   
Sbjct: 64 RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQR 97


>gi|2804173|dbj|BAA24410.1| acetyl-coenzyme A carboxylase like carboxylase [Saccharomyces
           cerevisiae]
          Length = 2273

 Score = 37.6 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|290463424|sp|A6ZMR9|HFA1_YEAS7 RecName: Full=Acetyl-CoA carboxylase, mitochondrial; Short=ACC;
           Includes: RecName: Full=Biotin carboxylase; Flags:
           Precursor
          Length = 2273

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|306836497|ref|ZP_07469468.1| cell division protein FtsI/penicillin-binding protein
           [Corynebacterium accolens ATCC 49726]
 gi|304567587|gb|EFM43181.1| cell division protein FtsI/penicillin-binding protein
           [Corynebacterium accolens ATCC 49726]
          Length = 404

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 23/93 (24%), Gaps = 27/93 (29%)

Query: 31  YTLLDTNTGHVIAENYPDH------------------------PWNPASLTKLMTAYVVF 66
             +LD  TG V+A    D                         P+ P S+ K++TA    
Sbjct: 280 AVVLDAATGQVLAMANTDTVDPNKNIEDQLKEGKDFENRSISHPYEPGSVAKIVTAAAAL 339

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
                          +  +      + +     
Sbjct: 340 QE---GITTPDEVHQVPGSIDMAGVTVNDAWPH 369


>gi|290463423|sp|C7GRE4|HFA1_YEAS2 RecName: Full=Acetyl-CoA carboxylase, mitochondrial; Short=ACC;
           Includes: RecName: Full=Biotin carboxylase; Flags:
           Precursor
          Length = 2273

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|290463422|sp|B3LM95|HFA1_YEAS1 RecName: Full=Acetyl-CoA carboxylase, mitochondrial; Short=ACC;
           Includes: RecName: Full=Biotin carboxylase; Flags:
           Precursor
          Length = 2273

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|320450595|ref|YP_004202691.1| penicillin-binding protein 2 [Thermus scotoductus SA-01]
 gi|320150764|gb|ADW22142.1| penicillin-binding protein 2 [Thermus scotoductus SA-01]
          Length = 581

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 36/157 (22%), Gaps = 41/157 (26%)

Query: 23  AETNKLPYYTL-LDTNTGHVI------------AENY--------------------PDH 49
               ++    + ++  TG V+                                       
Sbjct: 243 PPATRVKGAIVAVNPKTGEVLAMASAPSFDPSLFAKRPVPQEVQALLKDKDLPLLNRAVQ 302

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           P+ P S  KL T+Y +           +T    S            +       +     
Sbjct: 303 PYTPGSTFKLATSYTLLEE---GYVSPSTTFRCSPYIVFGGQVRRNWAARDMGPMTVKEA 359

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
           +    +         +++ +     V  +   ++ LG
Sbjct: 360 IAWSCNTWYY-----QAVAQDPLGVVDRLAARARLLG 391


>gi|296282018|ref|ZP_06860016.1| Beta-lactamase class A [Citromicrobium bathyomarinum JL354]
          Length = 356

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 59/214 (27%), Gaps = 13/214 (6%)

Query: 34  LDTNTGH---VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           +D  TG    V+     D  +  AS +K+  A    + + + +  L++   +    +   
Sbjct: 89  VDLTTGAEVGVL----ADQRFPMASTSKVAIAATFLAGVDQGRWSLSSEFELPGRGTYIS 144

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                    +    D    LL          A   S    + +  +++    +  G +  
Sbjct: 145 AREHLNLMITRSCNDCTDALLNAVGGPQAVNAWMRSAGILDFQLTRNIAALVREDGRTDP 204

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
                   +      T R M  L   I           Q+    +               
Sbjct: 205 AT-----EIDLRDSATPRAMGQLLAGIYQGRWLSPSSRQVLMNAMGDTVTGKRRMTSALP 259

Query: 211 LGAD-GMKTGFTCASGFNIVASAIQGDQSLIAVI 243
           + A+   KTG    +  +I        + + A I
Sbjct: 260 MSANLAHKTGTLSRTASDIGIFYTPDGRPIAAAI 293


>gi|290463425|sp|C8ZF72|HFA1_YEAS8 RecName: Full=Acetyl-CoA carboxylase, mitochondrial; Short=ACC;
           Includes: RecName: Full=Biotin carboxylase; Flags:
           Precursor
          Length = 2273

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|1708192|sp|P32874|HFA1_YEAST RecName: Full=Acetyl-CoA carboxylase, mitochondrial; Short=ACC;
           Includes: RecName: Full=Biotin carboxylase; Flags:
           Precursor
          Length = 2273

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 38/167 (22%), Gaps = 1/167 (0%)

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG-HYTTA 167
           K +    +       +             +      L L    F N  G           
Sbjct: 3   KTITHGQSWGARRIHSHFYITIFTITCIRIGQYKLALYLDPYRFYNITGSQIVRLKGQRP 62

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFN 227
                +         +    F  +          N +          G+ T  +      
Sbjct: 63  EYRKRIFAHSYRHSSRIGLNFPSRRRYSNYVDRGNIHKHTRLPPQFIGLNTVESAQPSIL 122

Query: 228 IVASAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFYNKTDRKKIN 274
                ++G  ++I+ IL A +     K   S+    +    D K I 
Sbjct: 123 RDFVDLRGGHTVISKILIANNGIAAVKEMRSIRKWAYETFNDEKIIQ 169


>gi|21909545|ref|NP_663813.1| hypothetical protein SpyM3_0009 [Streptococcus pyogenes MGAS315]
 gi|21903725|gb|AAM78616.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 428

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 54/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T  K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYIKDVNHFYGDYDPLGSGKISKIP 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAII 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|28894922|ref|NP_801272.1| hypothetical protein SPs0010 [Streptococcus pyogenes SSI-1]
 gi|28810167|dbj|BAC63105.1| hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 428

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 54/204 (26%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST--------FK 97
             D     AS++KL   Y+V   L++KK      +T  K+ + +                
Sbjct: 222 NADKKMYAASISKLAPLYIVQKQLQKKKLAENKTLTYIKDVNHFYGDYDPLGSGKISKIP 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +++ LK +  +S N     +   LC    K  +        +            
Sbjct: 282 DNKDYRVEDLLKAVAQQSDNVATNILGYYLCHQYDKAFRSEIKALSGIDWDM-----EQR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     + Q +  +       +       +     + 
Sbjct: 337 LLTSRSAANMMEAIYHQKGQIISYLSNTEFDQQRITKNITVPVAHKIGDAYDYKHDVAII 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G T          +   D + IA
Sbjct: 397 YGNTPFILSIFTNKSTYEDITAIA 420


>gi|114330251|ref|YP_746473.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Nitrosomonas eutropha C91]
 gi|114307265|gb|ABI58508.1| D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS
          family S13 [Nitrosomonas eutropha C91]
          Length = 475

 Score = 37.6 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 13/81 (16%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYT-------------LLDTNTGHVIAENYP 47
          M+  L I  +   +  FP  ++   + +                 + +      +     
Sbjct: 1  MKSLLKITWLLWGALTFPAYAVDLPDTVRQALKKTGIPEAAVGIYVREVGAERPLVSVNA 60

Query: 48 DHPWNPASLTKLMTAYVVFSF 68
          D P NPAS+ K++T Y     
Sbjct: 61 DVPMNPASVMKVVTTYAGLEM 81


>gi|330963530|gb|EGH63790.1| esterase [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 392

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
          D  +  ASLTKL+T+  V    +     L 
Sbjct: 58 DTRFRLASLTKLLTSVTVLRLCEVGVLSLD 87


>gi|330877661|gb|EGH11810.1| esterase [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 392

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
          D  +  ASLTKL+T+  V    +     L 
Sbjct: 58 DTRFRLASLTKLLTSVTVLRLCEVGVLSLD 87


>gi|328676710|gb|AEB27580.1| D-alanyl-D-alanine carboxypeptidase [Francisella cf. novicida
          Fx1]
          Length = 464

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 27 KLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
                 ++++    VI     D  + PAS TKL+T  
Sbjct: 45 SAQIAVKIINSEKNTVILSKNADKNFIPASNTKLLTGI 82


>gi|291303038|ref|YP_003514316.1| beta-lactamase [Stackebrandtia nassauensis DSM 44728]
 gi|290572258|gb|ADD45223.1| beta-lactamase [Stackebrandtia nassauensis DSM 44728]
          Length = 480

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 31/112 (27%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
            + P   ASL+K  TA  V    ++ K  L  P+    +        +       +    
Sbjct: 76  GEAPMPIASLSKSFTALAVMRLSEQGKVDLDAPVREYLSEFTMDDPRAKRITVRQLLNQT 135

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
           +       S    A     +   +     +      K+      +F  A  +
Sbjct: 136 SGMSDGTFSEKVEAQPSDLAGSVSRLADAELATAPGKSWNYHNPNFHVAARL 187


>gi|229096279|ref|ZP_04227252.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
 gi|228687239|gb|EEL41144.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-29]
          Length = 115

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 13/41 (31%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+     +     AS  K++ A      + E K     
Sbjct: 29 NGEVLTSINANKKLPLASTAKIVIAVEFAKQVSEGKISRDE 69


>gi|219920961|emb|CAQ76658.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920979|emb|CAQ76667.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGGGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|330446050|ref|ZP_08309702.1| beta-lactamase CARB-6 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490241|dbj|GAA04199.1| beta-lactamase CARB-6 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 294

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 76/271 (28%), Gaps = 8/271 (2%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYT-LLDTNTGHVIAENYPDHPWNPASLTKLMTAY 63
              +++A  +         +         +L+ N G  +     +  +   S  K +   
Sbjct: 24  FSAMSVASTNIDSAIKHAEQQLGAKVGVSVLNAN-GDSLYGYNSEQRFPLMSTFKTLACA 82

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
            +    +  K M+     ++  A          K G+ ++L +A    +  S N  A  +
Sbjct: 83  KLLHDNQITKGMMDKTYPVTAEAILDYAPIFKDKVGTEVSLKDACFATMTTSDNSAANFV 142

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-QHGHYTTARDMAILSWRIKTDFP 182
              +   E      ++N      L     +            TT   M     ++     
Sbjct: 143 LAHIGGAEGVTKFLIDNGDNVTRLDRIEPLLNEATPGDKRDTTTPYAMNETITKLVLGDA 202

Query: 183 QYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD-GMKTGFTCASGFNIVASAIQGDQS--L 239
                       +K  K  N  +      G +   ++G        I A      +   +
Sbjct: 203 LNPASKAQLTEWMKANKVSNGLFRSVLPQGWEIADRSGAGGYGSRGITAVVWNEQKQPLV 262

Query: 240 IAVILGAL--DRNTRNKVSASLLSMGFYNKT 268
           I+V L         R+K  A + +  F   T
Sbjct: 263 ISVYLTGTEASIPERDKEIAKIGNAIFERYT 293


>gi|326801908|ref|YP_004319727.1| beta-lactamase [Sphingobacterium sp. 21]
 gi|326552672|gb|ADZ81057.1| beta-lactamase [Sphingobacterium sp. 21]
          Length = 812

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/224 (10%), Positives = 61/224 (27%), Gaps = 16/224 (7%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L D +T            ++ AS  K       F  ++  K  L+  + +          
Sbjct: 562 LSDNDT----FFYNEHQLFHAASTMKTPVLAETFRQIERGKLALSDSVEVYNEFKSIYDG 617

Query: 93  NSTFKKGSTMTLDNAL------------KLLIVKSANDIAVAIAESLCKTEKKFVQHMNN 140
           +S        +                  L ++  ++++A  I   L   +         
Sbjct: 618 SSYAIDARDDSEQGLYSLIGKKATLADLLLRMITQSSNLATNIVIDLVGAKNVMKTMERL 677

Query: 141 TSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKY 200
            +K + +      +        +  +A D+++L  ++           +     +  + +
Sbjct: 678 GAKEMKILRGVEDSKAFAHGMNNMVSAYDLSLLFVQLARGEMINSRSSEQMLDILMKQHF 737

Query: 201 PNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
                A          KTG       +     +   +  + ++L
Sbjct: 738 RGIIPAELPADVKVANKTGSINKVCHDSGIVFLPDGRKYVLILL 781


>gi|312132103|ref|YP_003999443.1| beta-lactamase [Leadbetterella byssophila DSM 17132]
 gi|311908649|gb|ADQ19090.1| beta-lactamase [Leadbetterella byssophila DSM 17132]
          Length = 490

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/253 (10%), Positives = 58/253 (22%), Gaps = 46/253 (18%)

Query: 1   MRQFLVIIAMAMLSNIFPF----LSIAETNKLP--------------YYTLLDTNTGHVI 42
           M++ L  + +A+ +          ++                     Y  + +   G V+
Sbjct: 1   MKRILFFVLLAISARAQSVEERIKALGPELNARLDAFKKKQNLASVSYAIVYN---GKVV 57

Query: 43  A-------ENYPDHP------WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                   E     P      +  AS++K      V       +  L  P  + +   E 
Sbjct: 58  HQNFDGFIEKESKRPATAQSVYRIASMSKSFAGVAVLQLRDAGRLKLEDP--VYQYIPEL 115

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
              + +                     N           +      + M    K     +
Sbjct: 116 SGQSYSSDSPDITIRHLLTHAAGFPEDNP-------WGDRQLGISTEEMLAMFKKGISFS 168

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYF--QIKGLEIKGKKYPNTNWAV 207
           T     +             ++ +S +   ++ Q   +    +K       K P      
Sbjct: 169 TEPGQTYEYSNMAFAMLGYIISQVSGQTYQEYIQEHIWNPLGMKDTYWDYTKVPKDQLVH 228

Query: 208 GTFLGADGMKTGF 220
           G +    G     
Sbjct: 229 G-YRYFQGDFVAQ 240


>gi|121533942|ref|ZP_01665768.1| hypothetical protein TcarDRAFT_2319 [Thermosinus carboxydivorans
          Nor1]
 gi|121307453|gb|EAX48369.1| hypothetical protein TcarDRAFT_2319 [Thermosinus carboxydivorans
          Nor1]
          Length = 257

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 15/82 (18%)

Query: 1  MRQFLVIIAMAMLSNIF------PFLSIAETNKLPY--------YTLLDTNTGHVIAENY 46
          M+++L+ I + +   +            A+                  +  TG       
Sbjct: 1  MKKWLIAIVLGITIVLANATVFGAPRPTAKEVTAYANTFEGSIGIYAKNLKTGKT-YAYR 59

Query: 47 PDHPWNPASLTKLMTAYVVFSF 68
           D  +  AS +KL+ A   + +
Sbjct: 60 SDVVFPTASTSKLVVALAAYKY 81


>gi|329116770|ref|ZP_08245487.1| hypothetical protein SPB_2043 [Streptococcus parauberis NCFD 2020]
 gi|326907175|gb|EGE54089.1| hypothetical protein SPB_2043 [Streptococcus parauberis NCFD 2020]
          Length = 428

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 15/48 (31%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
             D     AS+ KL T Y V   +   +  L +        + +    
Sbjct: 222 NADKQMYAASIAKLGTLYFVQERVNNGQLRLDSKFKYVDQVNHFNGDY 269


>gi|302344706|ref|YP_003809235.1| penicillin-binding protein transpeptidase [Desulfarculus baarsii
           DSM 2075]
 gi|301641319|gb|ADK86641.1| penicillin-binding protein transpeptidase [Desulfarculus baarsii
           DSM 2075]
          Length = 416

 Score = 37.6 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 56/268 (20%), Gaps = 40/268 (14%)

Query: 30  YYTLLDTNTGHVIA-----------ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
              ++D +TG V+                D     ASL KL+TA               +
Sbjct: 103 AVAMVDAHTGRVLVLAGSEAGRLDPSQAIDAEPPAASLFKLVTAAATLEETP---LAPNS 159

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
            ++ S +A     +    K                 +           L           
Sbjct: 160 KVSYSGHAHTLYRNQVAQKLRKWAHQITLSYSFAQSNNPVFGRLGVFRLGHGLLTRYAQA 219

Query: 139 NNTSKNLGL---------------SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
               + L                  +               T+A   A++          
Sbjct: 220 LGFEQQLDFELPVEPSHLFNLNPKDSFAVAELASGYNRETTTSALHAALMVSTFVNGGRM 279

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA---SGFNIVASAIQ--GDQS 238
              Y   +  + +G         +G        KT               +A +  G+  
Sbjct: 280 PQPYVVQRVTDARGDLLYVGQPDIG--PPVLSPKTCNDMEDLLHATVTCGTARREFGNSR 337

Query: 239 LIAVI----LGALDRNTRNKVSASLLSM 262
              V+    LG      R      L   
Sbjct: 338 RDKVLRRLDLGGKTGTIRGPDRTELYQW 365


>gi|219920905|emb|CAQ76630.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920911|emb|CAQ76633.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920939|emb|CAQ76647.1| beta-lactamase [Klebsiella oxytoca]
 gi|219920943|emb|CAQ76649.1| beta-lactamase [Klebsiella oxytoca]
          Length = 275

 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 5/211 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVI 243
            G KTG       N +A     +   L+ V 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVLVT 264


>gi|296114775|ref|ZP_06833425.1| beta-lactamase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978699|gb|EFG85427.1| beta-lactamase [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/270 (10%), Positives = 72/270 (26%), Gaps = 31/270 (11%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSI------AETNKLP--YYTLLDTNTGHV----IAENYPD 48
           +R+ ++   + ++    P  +       A+T       + +    +G      +      
Sbjct: 33  LRRGVMTATVGLVCAAAPVQAATLAQDVAKTVSGQPGSFAVYAAMSGQRPQVCL---NCT 89

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS-------- 100
              N AS  KL      +             I +         + S   +          
Sbjct: 90  DYINAASTMKLFVMDAAYDMFTRGTLQPQETIVVHNRFHSLVGTRSFSLEQKEDSYDPLY 149

Query: 101 -----TMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN-NTSKNLGLSATHFMN 154
                 +T+   ++++I  S+N     + E +          M+    K +         
Sbjct: 150 AQIGRPVTVSELVRVMIQYSSNLATNLMVERIGVPY--IHAVMHAQHLKGVRFGRMIEDY 207

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGAD 214
                   +  TA+ + +   ++                 ++G+ + +            
Sbjct: 208 DANDKGIRNEMTAKGLGMFMQKLDQGKIVGPAQSAAMIDILRGQTFNDMIPPGLPPGTPV 267

Query: 215 GMKTGFTCASGFNIVASAIQGDQSLIAVIL 244
             KTG+      +     +   +  I V+L
Sbjct: 268 AHKTGWVDGVRNDAGIVFLPDGRHYILVML 297


>gi|221638747|ref|YP_002525009.1| Pbp2 protein [Rhodobacter sphaeroides KD131]
 gi|221159528|gb|ACM00508.1| Pbp2 protein [Rhodobacter sphaeroides KD131]
          Length = 648

 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/185 (10%), Positives = 39/185 (21%), Gaps = 44/185 (23%)

Query: 26  NKLPYYTLLDTNTGHVIA------------------------ENYPDHPW---------N 52
            +      +D  TG ++A                              P           
Sbjct: 265 AESAAAVAIDVITGDILAICSSPSFDPNLFVRGISFKDYAALTENDHRPLANKAVQGAYP 324

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           P S  K++TA                   I+   S Y P +                 ++
Sbjct: 325 PGSTFKMVTALAALEAG-----------VITPETSVYCPGHYETGGRRFHCWKRGGHGMV 373

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172
             S +             ++  +  +    + LGL   H +    + +      A     
Sbjct: 374 SLSRSLAESCDVYYYDIAQRVGIDKIAEMGRRLGLGMRHDLPMSAITEGIMPDKAWKRQR 433

Query: 173 LSWRI 177
                
Sbjct: 434 YEQDW 438


>gi|297199552|ref|ZP_06916949.1| beta-lactamase [Streptomyces sviceus ATCC 29083]
 gi|197713522|gb|EDY57556.1| beta-lactamase [Streptomyces sviceus ATCC 29083]
          Length = 303

 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 64/259 (24%), Gaps = 17/259 (6%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLPYYTL---LDT---------NTGHVIAENYPDH 49
           R  L      +++        A+      + L    D           TG     +  D 
Sbjct: 19  RTLLAAGTATLVTGASTAAYAADDITARLHALEERYDARLGVFAHHVTTGRS-VRHRADE 77

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-SNSTFKKGSTMTLDNAL 108
            +   S+ K + A  V   L     +L   I  ++     P    +       MT+    
Sbjct: 78  RFPMCSVFKALAAAAVLRDLDRDGEVLARRIHYTEADLVQPGSDQTAAHLAEGMTIAELA 137

Query: 109 KLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
            + I  S N     +           +F + + +    L         A    +    + 
Sbjct: 138 DVAITFSDNTAGNLLLRELGGPTAITRFARSLGDRVTRLDRWEPELNTAEPWRRTDTTSP 197

Query: 167 ARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKT-GFTCASG 225
                     +  D         +    +      N   A          KT G +  + 
Sbjct: 198 YAIGRTYGRLVLGDALDRRDRQLLTHWLLNNTTSVNRFHAGLPKTWTIADKTGGGSYGTN 257

Query: 226 FNIVASAIQGDQSLIAVIL 244
            ++     +    ++  +L
Sbjct: 258 NDVGVVWTEDGDPIVLSVL 276


>gi|257470653|ref|ZP_05634743.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium ulcerans ATCC
          49185]
 gi|317064859|ref|ZP_07929344.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium ulcerans ATCC
          49185]
 gi|313690535|gb|EFS27370.1| D-alanyl-D-alanine carboxypeptidase [Fusobacterium ulcerans ATCC
          49185]
          Length = 477

 Score = 37.6 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           +  +D  TG V+A++       PAS+ K++T+     
Sbjct: 51 SFYAVDLKTGKVVADHRGKSALVPASVMKIITSAAALE 88


>gi|310793488|gb|EFQ28949.1| beta-lactamase [Glomerella graminicola M1.001]
          Length = 393

 Score = 37.3 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 35 DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          D NT   +A +        AS+TKL T       ++     L  
Sbjct: 40 DLNTKKSLAADNI---LTLASVTKLFTTIAALQLVERGILSLDQ 80


>gi|261493678|ref|ZP_05990197.1| S13 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
          haemolytica serotype A2 str. BOVINE]
 gi|261494345|ref|ZP_05990839.1| S13 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
          haemolytica serotype A2 str. OVINE]
 gi|261309994|gb|EEY11203.1| S13 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
          haemolytica serotype A2 str. OVINE]
 gi|261310678|gb|EEY11862.1| S13 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
          haemolytica serotype A2 str. BOVINE]
          Length = 481

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 5/70 (7%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
          + +F++   +          +              +   + +T  +I +   D    PAS
Sbjct: 11 LNKFILSTLLIPSITQAEINTEELLNTLPAGTSVSFIAKNLDTNQIITQYQSDIFMLPAS 70

Query: 56 LTKLMTAYVV 65
            K+ TA   
Sbjct: 71 TQKVFTALAA 80


>gi|118497594|ref|YP_898644.1| beta-lactamase class A [Francisella tularensis subsp. novicida
           U112]
 gi|195536294|ref|ZP_03079301.1| beta-lactamase [Francisella tularensis subsp. novicida FTE]
 gi|208779395|ref|ZP_03246741.1| beta-lactamase [Francisella novicida FTG]
 gi|118423500|gb|ABK89890.1| beta-lactamase class A [Francisella novicida U112]
 gi|194372771|gb|EDX27482.1| beta-lactamase [Francisella tularensis subsp. novicida FTE]
 gi|208745195|gb|EDZ91493.1| beta-lactamase [Francisella novicida FTG]
          Length = 294

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 53/212 (25%), Gaps = 3/212 (1%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                   +   S  K +    +         +L   I ISKN        +      TM
Sbjct: 55  FAVNASFYFPICSTYKFLVVGAILKQSMTDNKLLNQKIKISKNQIVEYSPITRRHINQTM 114

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
           T+    +  +        + I +                      +    +N   +  + 
Sbjct: 115 TVKQLCQASMQGDNTATNILIEKLGGLKNLNKFILSLADHATKVANLEPKVNHVSLTTNE 174

Query: 163 HYTTARDMAILSWRIKT--DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + TT + MA    ++    D     H    K   I      N   A        G KTG 
Sbjct: 175 NKTTPKIMARDINKLAFSDDILNKKHRLMFKQWLIASNTSNNRIAAEVPDEWEVGDKTGT 234

Query: 221 TCASGFNIVASAIQGDQS-LIAVILGALDRNT 251
                 N VA     D   +I  I     +  
Sbjct: 235 CQYGTTNDVAIIWPDDNRAVIMAIFYTQSQKN 266


>gi|254387600|ref|ZP_05002839.1| penicillin-binding protein PBP [Streptomyces clavuligerus ATCC
           27064]
 gi|294815013|ref|ZP_06773656.1| Penicillin-binding protein PBP [Streptomyces clavuligerus ATCC
           27064]
 gi|326443381|ref|ZP_08218115.1| secreted penicillin-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|21552252|gb|AAK56496.1| penicillin-binding protein PBP [Streptomyces clavuligerus]
 gi|30088981|gb|AAP13507.1| Orf18 [Streptomyces clavuligerus]
 gi|197701326|gb|EDY47138.1| penicillin-binding protein PBP [Streptomyces clavuligerus ATCC
           27064]
 gi|294327612|gb|EFG09255.1| Penicillin-binding protein PBP [Streptomyces clavuligerus ATCC
           27064]
          Length = 494

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 7/124 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD + G  +A       + P S  K++TA               T   +S        + 
Sbjct: 199 LDKDKGKPLANRALRETFPPGSTFKILTAAAALEHGVIDDIDAKTD-AVSPYPLPQSTNT 257

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G+      +LK  +  S N++       L    K  V  M +T++  G +   + 
Sbjct: 258 VGSEAGNAACDKVSLKTAMQHSCNNV------FLDAAVKLGVDKMRDTAEKFGFNEDVYS 311

Query: 154 NAHG 157
           +A G
Sbjct: 312 DAFG 315


>gi|77462877|ref|YP_352381.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
 gi|126461769|ref|YP_001042883.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|77387295|gb|ABA78480.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides 2.4.1]
 gi|126103433|gb|ABN76111.1| peptidoglycan glycosyltransferase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 648

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/147 (9%), Positives = 27/147 (18%), Gaps = 37/147 (25%)

Query: 26  NKLPYYTLLDTNTGHVIA------------------------ENYPDHPW---------N 52
            +      +D  TG ++A                              P           
Sbjct: 265 AESAAAVAIDVITGDILAICSSPSFDPNLFVRGISFKDYAALTENDHRPLANKAVQGAYP 324

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           P S  K++TA               T +       E         K     + +  + L 
Sbjct: 325 PGSTFKMVTALAALEA---GVITPETSVYC-PGHYETGGRRFHCWKRGGHGMVSLSRSLS 380

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMN 139
                               +  + + 
Sbjct: 381 ESCDVYYYDIAQRVGIDKIAEMGRRLG 407


>gi|239978977|ref|ZP_04701501.1| cell division protein FtsI/penicillin-binding protein [Streptomyces
           albus J1074]
 gi|291450856|ref|ZP_06590246.1| cell division protein FtsI/penicillin-binding protein [Streptomyces
           albus J1074]
 gi|291353805|gb|EFE80707.1| cell division protein FtsI/penicillin-binding protein [Streptomyces
           albus J1074]
          Length = 671

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 46/172 (26%), Gaps = 30/172 (17%)

Query: 13  LSNIFPFLSIAETNKLPYY----TLLDTNTGHVIAENYP--------------------- 47
           +          +  K         + DT TG ++A                         
Sbjct: 311 IQWAAQNAIAEQVTKSKAARGYVIVQDTATGEILALANAPGFDPNDLTRAAATSLGNAAV 370

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
              + P S  K+M+   V                ++     +             T    
Sbjct: 371 QDAYEPGSTAKVMSMAAVLEENAATPGT-----HVTVPNRLHRGDRLFQDDVDHPTWYLT 425

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
           L  ++ KS+N   +   E L KT+ +  + +++  +  G+     +   G  
Sbjct: 426 LNGVLAKSSNIGTILAVEQLGKTQPEANKVLHSYLRKFGIGRPTGLGFPGET 477


>gi|300854825|ref|YP_003779809.1| putative beta-lactamase [Clostridium ljungdahlii DSM 13528]
 gi|300434940|gb|ADK14707.1| putative beta-lactamase [Clostridium ljungdahlii DSM 13528]
          Length = 257

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 5/199 (2%)

Query: 31  YTLLD-TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
             +++   TG  I     +   + ASL K+     + + +KE K  L   IT+  +    
Sbjct: 18  AFVIENLKTGEKI-AYNENVVVSSASLIKIPIMMEILNQVKEGKLSLKQRITVEDDVKVP 76

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE-SLCKTEKKFVQHMNNTSKNLGLS 148
               +  + G++ TL + + L+I++S N  A  + + +       +++ +   +  L   
Sbjct: 77  FSILNLLESGNSYTLKDVITLMIIQSDNTAANILMDLAGMDNVNNYIKDLEIKNTVLQRK 136

Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                         + TTA DMA     I         Y  I    +  +   +      
Sbjct: 137 MLDSKARKE--GRENKTTAADMAKFFEIIYKGEKAKEFYSVIMKNILTSQLDNSVMRLNI 194

Query: 209 TFLGADGMKTGFTCASGFN 227
                   KTG       +
Sbjct: 195 PDDIRIAHKTGDLNGISHD 213


>gi|167616211|ref|ZP_02384846.1| class A beta-lactamase precursor [Burkholderia thailandensis Bt4]
          Length = 294

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 69/229 (30%), Gaps = 6/229 (2%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
             LDT TG  I  +  D  +   S  K M +  V +      A+L   I  +K       
Sbjct: 53  VALDTATGARI-AHRADERFPFCSTFKTMLSAAVLARSAGDAALLQRRIPYAKRDLVRYS 111

Query: 92  SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSA 149
             +    G+ MT+       +  S N  A  +       +    + + + + +  L    
Sbjct: 112 PITEKHVGAGMTVAELCAATLQYSDNTAANLLIALLGGPQAVTAYARSIGDATFRLDRRE 171

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT 209
           T    A    +    T A   A +   +  D        Q+    +  K       A   
Sbjct: 172 TELNTAIPGDERDTTTPAAMAASVRRLLVGDALGTAQRAQLNAWMLGNKTGDARIRAGVP 231

Query: 210 FLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKVSA 257
                  KTG       N +  A   D+  ++ V+       +RN  + 
Sbjct: 232 AGWRVADKTGTGDYGTGNDIGVAYPPDRAPIVFVV--YTTMRSRNAQAR 278


>gi|118469257|ref|YP_888510.1| penicillin binding protein transpeptidase domain-containing protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118170544|gb|ABK71440.1| Penicillin binding protein transpeptidase domain protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 648

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 25/82 (30%)

Query: 23  AETNKLPYYTLLDTNTGHVIAENYPDH----------------------PWNPASLTKLM 60
           A   K     +LD  TG V+A +  +                       P+ P S+ K++
Sbjct: 301 ASGAKNVSAVVLDAKTGEVLAMSNDNTFDPSQDIGRQADRQMGNPSVSSPFEPGSVNKIV 360

Query: 61  TAYVVFSFLKEKKAMLTTPITI 82
           TA                 + +
Sbjct: 361 TAAAAIEN---GLTNPDEVLQV 379


>gi|297545248|ref|YP_003677550.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296843023|gb|ADH61539.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 420

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 74/241 (30%), Gaps = 25/241 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D NTG  + E      +  AS  K+   + +++ + + K      +  ++   E    +
Sbjct: 196 IDLNTGQTL-EINGYDSFIAASTYKVPLNFYLYTLITDGKIDPNMKVQYTQADYEGGAGS 254

Query: 94  STFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                  S  T+    +  I +S N  +  I          +++ M      +       
Sbjct: 255 IQADPVGSYYTIRELSRRSIEESDNIASNMIMR--VVGRDNYIKFMEKLGAYV------- 305

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                +    + T+ RDM+ +  +   D+         + +        N   +     G
Sbjct: 306 -----IPYSSNITSPRDMS-MYMKKLLDYVNAHPDTAGELMYYLKNTIYNDRISYPIPDG 359

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRN--KVSASLLSMGFY 265
            +        ++  N  A      +  I  +L     G+ D       +  + ++   F 
Sbjct: 360 IEVAHKIGNLSNVVNDTAIVFHPARPYILTVLANDVDGSDDSYAYTVIRQISKMV-YDFQ 418

Query: 266 N 266
           N
Sbjct: 419 N 419


>gi|295839281|ref|ZP_06826214.1| beta-lactamase [Streptomyces sp. SPB74]
 gi|197696896|gb|EDY43829.1| beta-lactamase [Streptomyces sp. SPB74]
          Length = 362

 Score = 37.3 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          PD P++ ASLTKL TA      ++     L T 
Sbjct: 60 PDTPFDLASLTKLFTAIATLQQVERGTLALDTR 92


>gi|322421255|ref|YP_004200478.1| penicillin-binding protein transpeptidase [Geobacter sp. M18]
 gi|320127642|gb|ADW15202.1| penicillin-binding protein transpeptidase [Geobacter sp. M18]
          Length = 443

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 12/57 (21%)

Query: 32  TLLDTNTGHVIA--ENYPDHP----------WNPASLTKLMTAYVVFSFLKEKKAML 76
             ++  TG ++A   +  + P          +  ASL K++TA       K      
Sbjct: 143 VAIEPKTGRILATVSHSANRPEWERGANYQLYPMASLFKIVTATAALEEKKVGPDTP 199


>gi|152981665|ref|YP_001352260.1| Beta-lactamase class A [Janthinobacterium sp. Marseille]
 gi|151281742|gb|ABR90152.1| Beta-lactamase class A [Janthinobacterium sp. Marseille]
          Length = 299

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 48/194 (24%), Gaps = 7/194 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
               +  N   V  E   +  +   S  K+M A  +      +  +L   I   K+  E 
Sbjct: 56  SALNM-ANDNRV--EYRAEERFPLCSTFKVMVAAAILQRSASEAQLLQKRIRYKKDQVEK 112

Query: 90  PPS--NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNL 145
                 +       MT+       +  S N  A  +            +++ + +    L
Sbjct: 113 SGYAPVTQKHLADGMTIAELCAATLQYSDNAAANFLMTELGGPAAVTAYMRSIGDDVFRL 172

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
                   +A    +    T A     L      +        Q+               
Sbjct: 173 DRWEPELNSAIPGDERDTSTPAAVERSLEKIALGNALANPQREQLVSWLKGNTTGSKRML 232

Query: 206 AVGTFLGADGMKTG 219
           A        G KTG
Sbjct: 233 AGVPRGWIVGDKTG 246


>gi|118590430|ref|ZP_01547832.1| Beta-lactamase class A [Stappia aggregata IAM 12614]
 gi|118436893|gb|EAV43532.1| Beta-lactamase class A [Stappia aggregata IAM 12614]
          Length = 331

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 16/50 (32%), Gaps = 1/50 (2%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            VI     D  +  AS  K+  A  V   +   +  L   + +  +    
Sbjct: 57  EVI-AFNGDETFAMASTYKVAIATTVLDRVDRGELSLDQLVEVPLDMFVT 105


>gi|312884005|ref|ZP_07743722.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrio
          caribbenthicus ATCC BAA-2122]
 gi|309368463|gb|EFP95998.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrio
          caribbenthicus ATCC BAA-2122]
          Length = 472

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAET------NKLPYYTLLDTNTGHVIAEN--YPDHPWN 52
          M + L + +  ++S +      A T      N     TL+++    V  +N    +  + 
Sbjct: 1  MWRSLCVCSAILMSVVTAHAIHASTFVDKLPNSTRSATLIESLNDSVRYQNTENQNQLFP 60

Query: 53 PASLTKLMTAYVV 65
          PAS  KL+TA   
Sbjct: 61 PASTLKLVTALAA 73


>gi|258453344|ref|ZP_05701329.1| beta-lactamase [Staphylococcus aureus A5937]
 gi|257864552|gb|EEV87295.1| beta-lactamase [Staphylococcus aureus A5937]
 gi|281334684|gb|ADA61768.1| Beta-lactamase [Staphylococcus epidermidis]
          Length = 281

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +        + +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGNKKVKQRLKGLGDKVTNPVRYE 157


>gi|284036781|ref|YP_003386711.1| beta-lactamase [Spirosoma linguale DSM 74]
 gi|283816074|gb|ADB37912.1| beta-lactamase [Spirosoma linguale DSM 74]
          Length = 517

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 33/112 (29%)

Query: 1   MRQ----FLVIIAMAMLSNIFPF---LSIAETNKLPYYT-------------LLDTNTGH 40
           M+     FL++ +  ++++ F      +     +   Y              +     G 
Sbjct: 1   MKNNLLVFLLVTSWCVVTSAFAQSKKTATDPVTRYDAYIQQAVRDWKVPGLTVTVVKDGK 60

Query: 41  VIAEN-------------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           ++ +                   +  AS TK MTA  +   + E K     P
Sbjct: 61  ILLKKGYGVRVIGKPDPVDSQTLFAMASTTKAMTAACLGMMVDEGKLNWDDP 112


>gi|294813267|ref|ZP_06771910.1| Beta-lactamase [Streptomyces clavuligerus ATCC 27064]
 gi|326441793|ref|ZP_08216527.1| beta-lactamase [Streptomyces clavuligerus ATCC 27064]
 gi|294325866|gb|EFG07509.1| Beta-lactamase [Streptomyces clavuligerus ATCC 27064]
          Length = 314

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 65/241 (26%), Gaps = 12/241 (4%)

Query: 34  LDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L+  TG  V+  +  D  +   SL K +    V   L    A L   I  ++        
Sbjct: 75  LNLATGRSVL--HRADERFPMCSLFKTIAVAAVLRDLDRDGAFLARRIRYTQADLVEHSP 132

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSAT 150
            +  +  + MT+       + +S N  A  +           +F + + +    L     
Sbjct: 133 VTPGRLSTGMTVSELCGAAVCRSDNSAANLLLRELGGPSAVTRFCRSVGDRVTRLDRWEP 192

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +A         +        +  +           ++    +      +   A    
Sbjct: 193 ALNSAEPWRAEDTTSPRAIGRTYTRLVLGPVLDRPDRRRLTEWLLANTTSGDRFRAGLPG 252

Query: 211 LGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVIL------GALDRNTRNKVSASLLSMG 263
               G KTG       N    A +     +   +L       A         +A+LL+  
Sbjct: 253 DWRLGDKTGAGEHGTNNDAGIAWKPDGTPVALAVLTTKREPTAPSDPPLIAKTAALLARA 312

Query: 264 F 264
            
Sbjct: 313 L 313


>gi|254388654|ref|ZP_05003887.1| beta-lactamase [Streptomyces clavuligerus ATCC 27064]
 gi|197702374|gb|EDY48186.1| beta-lactamase [Streptomyces clavuligerus ATCC 27064]
          Length = 309

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 65/241 (26%), Gaps = 12/241 (4%)

Query: 34  LDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           L+  TG  V+  +  D  +   SL K +    V   L    A L   I  ++        
Sbjct: 70  LNLATGRSVL--HRADERFPMCSLFKTIAVAAVLRDLDRDGAFLARRIRYTQADLVEHSP 127

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSAT 150
            +  +  + MT+       + +S N  A  +           +F + + +    L     
Sbjct: 128 VTPGRLSTGMTVSELCGAAVCRSDNSAANLLLRELGGPSAVTRFCRSVGDRVTRLDRWEP 187

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +A         +        +  +           ++    +      +   A    
Sbjct: 188 ALNSAEPWRAEDTTSPRAIGRTYTRLVLGPVLDRPDRRRLTEWLLANTTSGDRFRAGLPG 247

Query: 211 LGADGMKTGFTCASGFNIVASAIQ-GDQSLIAVIL------GALDRNTRNKVSASLLSMG 263
               G KTG       N    A +     +   +L       A         +A+LL+  
Sbjct: 248 DWRLGDKTGAGEHGTNNDAGIAWKPDGTPVALAVLTTKREPTAPSDPPLIAKTAALLARA 307

Query: 264 F 264
            
Sbjct: 308 L 308


>gi|158335463|ref|YP_001516635.1| D-Ala-D-Ala carboxypeptidase [Acaryochloris marina MBIC11017]
 gi|158305704|gb|ABW27321.1| D-Ala-D-Ala carboxypeptidase [Acaryochloris marina MBIC11017]
          Length = 426

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 11/28 (39%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFS 67
            ++  +    P   ASLTK+ T      
Sbjct: 73  QLLVNHNAQQPLPAASLTKVATTLAALK 100


>gi|225867993|ref|YP_002743941.1| penicillin binding protein 2x [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701269|emb|CAW98249.1| putative penicillin binding protein 2x [Streptococcus equi subsp.
           zooepidemicus]
          Length = 751

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 37/160 (23%), Gaps = 26/160 (16%)

Query: 30  YYTLLDTNTGHVIAE-----NYPDH------------------PWNPASLTKLMTAYVVF 66
             TL++  TG ++A         D                    + P S  K+MT     
Sbjct: 292 SATLVNAKTGEILATTQRPTYNADTLEGLNSKSYSWQNILHQGQFEPGSTMKVMTLAAAI 351

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K        + +   +    +   +     ++    +      S +         
Sbjct: 352 DE---KVFNPDETFSNANGLTIADATIQDWAINEGISTGQYMTYAQGFSFSSNVGMTKLE 408

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
                 K++ ++                  G+    +  T
Sbjct: 409 QKMGNDKWMNYLTKFRFGFRTRFGLENEDPGIFPSDNIVT 448


>gi|229102394|ref|ZP_04233102.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
 gi|228681041|gb|EEL35210.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-28]
          Length = 363

 Score = 37.3 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 13/41 (31%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+     +     AS  K++ A      + E K     
Sbjct: 57 NGEVLTSINANKKLPLASTAKIVIAVEFAKQVSEGKISRDE 97


>gi|229115234|ref|ZP_04244644.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
 gi|228668374|gb|EEL23806.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock1-3]
          Length = 363

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 13/41 (31%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+     +     AS  K++ A      + E K     
Sbjct: 57 NGEVLTSINANKKLPLASTAKIVIAVEFAKQVSEGKISRDE 97


>gi|167566792|ref|ZP_02359708.1| beta-lactamase precursor [Burkholderia oklahomensis EO147]
          Length = 269

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 41/156 (26%), Gaps = 10/156 (6%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPD--HPWNPASLTK 58
           M+    + +  +L       + AET         D  +G+ +     D      PAS  K
Sbjct: 1   MKIRHALSSALVLLGCIAASARAETICTAIA---DAGSGNFLL-KDGDCSRRTTPASTFK 56

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL--DNALKLLIVKSA 116
           +  + + +     +      P+   ++           +          + +      + 
Sbjct: 57  IAISLMGYDAGFLR--NEHEPVLPYRDGYVDWGGAVWKQPTDPTRWLKYSVVWYSQRVTH 114

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
              A   A      +        +  KN GL     
Sbjct: 115 TLGAQRFARYAKAFDYGNADVSGDPGKNNGLDRAWI 150


>gi|253995808|ref|YP_003047872.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Methylotenera mobilis JLW8]
 gi|253982487|gb|ACT47345.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Methylotenera mobilis JLW8]
          Length = 477

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 10/77 (12%)

Query: 1  MRQFLVIIAMAMLSNI----FPFLSIAETNKLP------YYTLLDTNTGHVIAENYPDHP 50
          M++F  I+++ +LS +     P    AE  +           +   ++   I  +Y D  
Sbjct: 1  MKKFTFIVSLMLLSGLAHAELPKTVAAELAQSGVPASDVSIYVQAVDSRVPILSHYADKS 60

Query: 51 WNPASLTKLMTAYVVFS 67
           NPAS+ K++T      
Sbjct: 61 MNPASVMKMVTTNAALD 77


>gi|229012741|ref|ZP_04169911.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
 gi|229061129|ref|ZP_04198480.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|229134371|ref|ZP_04263184.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|229168286|ref|ZP_04296011.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228615112|gb|EEK72212.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH621]
 gi|228648992|gb|EEL05014.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST196]
 gi|228718212|gb|EEL69850.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH603]
 gi|228748576|gb|EEL98431.1| D-alanyl-D-alanine carboxypeptidase [Bacillus mycoides DSM 2048]
          Length = 359

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 15/212 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      V+    PD 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLI-KRNDKVVYSVNPDV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS  KL+ A      + E K   ++   +S N         T         +   K
Sbjct: 60  VLPVASTMKLIVALEYTKQVTEGKIDPSS--FVSINDVNRYYVPGTDGGAQDRWQNYLQK 117

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
              +         +A+ + K               L     +   +  +  H        
Sbjct: 118 KEKITEGAVSLEEVAKGMVKFSSNANTEYLMEVLGLDNINRNL-QSLALPAHQPLFPIVS 176

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
              +   +  +     +  + K  E+  ++Y 
Sbjct: 177 SLYIPGYLHKELHVPKYKIEKKLKEMSQEQYR 208


>gi|195978688|ref|YP_002123932.1| cell division protein FtsI [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225871091|ref|YP_002747038.1| penicillin binding protein 2x [Streptococcus equi subsp. equi 4047]
 gi|195975393|gb|ACG62919.1| cell division protein FtsI [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225700495|emb|CAW94935.1| putative penicillin binding protein 2x [Streptococcus equi subsp.
           equi 4047]
          Length = 751

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 37/160 (23%), Gaps = 26/160 (16%)

Query: 30  YYTLLDTNTGHVIAE-----NYPDH------------------PWNPASLTKLMTAYVVF 66
             TL++  TG ++A         D                    + P S  K+MT     
Sbjct: 292 SATLVNAKTGEILATTQRPTYNADTLEGLNSKSYSWQNILHQGQFEPGSTMKVMTLAAAI 351

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                K        + +   +    +   +     ++    +      S +         
Sbjct: 352 DE---KVFNPDETFSNANGLTIADATIQDWAINEGISTGQYMTYAQGFSFSSNVGMTKLE 408

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTT 166
                 K++ ++                  G+    +  T
Sbjct: 409 QKMGNDKWMNYLTKFRFGFRTRFGLENEDPGIFPSDNIVT 448


>gi|254361959|ref|ZP_04978090.1| S13 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
          haemolytica PHL213]
 gi|153093506|gb|EDN74486.1| S13 family serine-type D-Ala-D-Ala carboxypeptidase [Mannheimia
          haemolytica PHL213]
          Length = 481

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 5/70 (7%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIA-----ETNKLPYYTLLDTNTGHVIAENYPDHPWNPAS 55
          + +F++   +          +              +   + +T  +I +   D    PAS
Sbjct: 11 LNKFILSTLLIPSITQAEINTEELLNTLPAGTSVSFIAKNLDTNQIITQYQSDIFMLPAS 70

Query: 56 LTKLMTAYVV 65
            K+ TA   
Sbjct: 71 TQKVFTALAA 80


>gi|295839426|ref|ZP_06826359.1| penicillin binding protein transpeptidase domain-containing protein
           [Streptomyces sp. SPB74]
 gi|295827471|gb|EFG65413.1| penicillin binding protein transpeptidase domain-containing protein
           [Streptomyces sp. SPB74]
          Length = 655

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 26/152 (17%)

Query: 30  YYTLLDTNTGHVIAENYP---------------------DHPWNPASLTKLMTAYVVFSF 68
           Y  + DT TG ++A                            + P S +K+M+   V   
Sbjct: 317 YVIVQDTRTGEILALANAPGFDPNDLRHADVAALGNPALQDAYEPGSTSKIMSMAAVLEE 376

Query: 69  LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLC 128
            K           ++                   T    L  ++ KS+N   +     L 
Sbjct: 377 NKATPGT-----HVTVPGELRRGDRVFHDDVPHGTWHLTLNGVLAKSSNIGTILATGQLG 431

Query: 129 KTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
           KT+ +  + +++  +  G+ +   +   G   
Sbjct: 432 KTQPQANRVLSSYLRKFGIGSATGLGFPGETS 463


>gi|259563908|gb|ACW83067.1| CTX-M-15 beta-lactamase [Klebsiella pneumoniae]
          Length = 138

 Score = 37.3 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 33/97 (34%), Gaps = 17/97 (17%)

Query: 1   MRQFLVIIA--MAMLSNIFPFLSIAETNKLPYY------------TLLD-TNTGHVIAEN 45
           +RQF ++    + +L    P  +     +                 L++  +   ++   
Sbjct: 6   LRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILY-- 63

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             D  +   S +K+M A  V    + +  +L   + I
Sbjct: 64  RADERFAMCSTSKVMAAAAVLKKSESEPNLLNQRVEI 100


>gi|289579043|ref|YP_003477670.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|289528756|gb|ADD03108.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
          Length = 420

 Score = 37.3 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 74/241 (30%), Gaps = 25/241 (10%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D NTG  + E      +  AS  K+   + +++ + + K      +  ++   E    +
Sbjct: 196 IDLNTGQTL-EINGYDSFIAASTYKVPLNFYLYTLITDGKIDPNMKVQYTQADYEGGAGS 254

Query: 94  STFKKG-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                  S  T+    +  I +S N  +  I          +++ M      +       
Sbjct: 255 IQADPVGSYYTIRELSRRSIEESDNIASNMIMR--VVGRDNYIKFMEKLGAYV------- 305

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                +    + T+ RDM+ +  +   D+         + +        N   +     G
Sbjct: 306 -----IPYSSNITSPRDMS-MYMKKLLDYVNAHPDTAGELMYYLKNTIYNDRISYPIPDG 359

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-----GALDRNTRN--KVSASLLSMGFY 265
            +        ++  N  A      +  I  +L     G+ D       +  + ++   F 
Sbjct: 360 IEVAHKIGNLSNVVNDTAIVFHPARPYILTVLANDVDGSDDSYAYTVIRQISKMV-YDFQ 418

Query: 266 N 266
           N
Sbjct: 419 N 419


>gi|323528878|ref|YP_004231030.1| Beta-lactamase [Burkholderia sp. CCGE1001]
 gi|323385880|gb|ADX57970.1| Beta-lactamase [Burkholderia sp. CCGE1001]
          Length = 315

 Score = 37.3 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 68/243 (27%), Gaps = 15/243 (6%)

Query: 13  LSNIFPFLSIAETNKLPY-----YTLLDTNTGHVIAEN-YPDHPWNPASLTKLMTAYVVF 66
            ++     +  E  +         +++DT +G  +    + D  +   S  KL+ A  + 
Sbjct: 46  FASADAIRARLEDIQAQSGGRLGVSIVDTTSG--LHAGLHADERFPMCSTFKLLAAGAIL 103

Query: 67  SFLKEKKAMLTTPITIS-----KNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
           + +   +  L   I  S       +             + M++    K  I  S N  A 
Sbjct: 104 ARVDRGEEDLQRRIVYSKSELVPYSPATSKHTRELTGNAGMSVAQLCKAAITLSDNTAAN 163

Query: 122 AIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKT 179
            + ++         FV+ + +    L  +      A         T    +  L   +  
Sbjct: 164 LLLQTFGGPAGLTAFVRSLGDGITRLDRNEPTLNEATPGDPRDTTTPNAMLGNLRELVLG 223

Query: 180 DFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSL 239
           +        Q+       +       A        G KTG       N VA      +  
Sbjct: 224 ERLSSASRAQLLAWLAANETGGARIRAKLPKDWGVGDKTGTGEHGTANDVAILWPPGRGP 283

Query: 240 IAV 242
           I V
Sbjct: 284 ILV 286


>gi|237741379|ref|ZP_04571860.1| beta-lactamase [Fusobacterium sp. 4_1_13]
 gi|229430911|gb|EEO41123.1| beta-lactamase [Fusobacterium sp. 4_1_13]
          Length = 261

 Score = 37.3 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 5/204 (2%)

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE-YPPSNSTFKKGST 101
                D     AS+ KL+    +   + E K  L+  + ++                G  
Sbjct: 35  FSVNGDKKVLSASMIKLLILAELMKKIFENKFSLSDTVMMANFMKIGGDGVLKELNTGHH 94

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTE-KKFVQHMNNTSKNLGLSATHFMNAHGVVQ 160
            TL     L+I+ S N     + + L      +  + ++     LG              
Sbjct: 95  FTLKELATLMIIVSDNQATNILIDFLGMENINQLGKELDLKETFLGRK--MMDAEARKKG 152

Query: 161 HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
           + +YT A D+++L   +               L+I  ++                     
Sbjct: 153 YDNYTCADDISLLLK-LIYQEKLINKEASQLMLDILLRQQQGERLQRYLPSDIKIAHKCG 211

Query: 221 TCASGFNIVASAIQGDQSLIAVIL 244
              +  N       GD++ I V+L
Sbjct: 212 DLDNLENDGGIIWLGDRAYILVVL 235


>gi|332664026|ref|YP_004446814.1| membrane alanyl aminopeptidase [Haliscomenobacter hydrossis DSM 1100]
 gi|332332840|gb|AEE49941.1| Membrane alanyl aminopeptidase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1140

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 67/239 (28%), Gaps = 14/239 (5%)

Query: 46   YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSNSTFKKGSTMTL 104
                  +PAS  K      VF    + K  L+  I +          S  +  +G    L
Sbjct: 902  NEKISIHPASTMKTPVLVEVFKQANQGKFKLSDSIVLKNEFKSIVDGSPYSLSEGDDSDL 961

Query: 105  DNALKLLIVKSANDIAVAIAESLCKTEKKF------VQHMNNTSKNLGLSATHFMNAHGV 158
                ++    S  D+A A+                  ++   T ++LGL           
Sbjct: 962  PWYQRMGQKVSIYDLARAMIVRSSNLATNMLIELVGAENTTQTMRDLGLQDIMVRRGVED 1021

Query: 159  -----VQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
                     +  TA D+ +L  RI           Q     +  +++ +           
Sbjct: 1022 SKAYAAGLNNSATAYDLMLLMERIGRGEAGRPVDCQEMIKILSDQEFNDVIPTCLPADVQ 1081

Query: 214  DGMKTGFTCASGFNIVASAIQGDQSLIAVIL--GALDRNTRNKVSASLLSMGFYNKTDR 270
               KTG+      +         +     IL  G  +    N+    ++ M +   + +
Sbjct: 1082 IAHKTGWITQHHHDSALIISPEGRYFSFTILSKGWTNETAANEAMGKVVEMAYRYFSKK 1140


>gi|303231009|ref|ZP_07317752.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302514391|gb|EFL56390.1| conserved hypothetical protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 271

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 17/240 (7%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGH---VIAENYPDHPWNPASLTKLMTA 62
           +I+  ++   +   L    ++    Y +   N G    ++A +        AS+ K +  
Sbjct: 4   LIVGKSLEMQLAALLDTLPSDATVSYMVTRLNEGEEATIVASSKETIVHTGASMVKTLIL 63

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYP-PSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             VF    +++  L   I +S++       +        + +     +L++V S N    
Sbjct: 64  EYVFHLAAQEQLDLNDTIALSRSPRVEGAGALMELVGNHSFSYLELCRLMMVLSDNWATN 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-----QHGHYTTARDMAILSWR 176
            + ++L       ++++N  ++ LGL                    +Y TA DMA+L   
Sbjct: 124 LLIQAL------GMENINARAEQLGLEHFEINRMMMDFTAVKENRENYITAMDMAVLLHH 177

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           I         +       +  +++ +              KTG       +         
Sbjct: 178 IYELRHTIYGH--EMWNILGRQQFRDILPFHWGEDVIFHHKTGSLDCVEHDAGIIETMNG 235


>gi|67973177|gb|AAY84123.1| beta-lactamase [Staphylococcus aureus]
          Length = 268

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKKLNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQIPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|31560464|ref|NP_058031.2| C-type lectin domain family 4 member F [Mus musculus]
 gi|26333907|dbj|BAC30671.1| unnamed protein product [Mus musculus]
 gi|148666677|gb|EDK99093.1| C-type lectin domain family 4, member f, isoform CRA_b [Mus
           musculus]
          Length = 548

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 51/179 (28%), Gaps = 19/179 (10%)

Query: 57  TKLMTAYV------------VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           TK +TA +              +  K+++      + +     +Y   N  +        
Sbjct: 374 TKALTAKIQGEQNRLGALQEAVAAQKQEQKTQNQVLQLIAQNWKYFNGNFYYFSRDKKP- 432

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
               +       +  A   + +  + +   VQ  ++    +GL+          V    +
Sbjct: 433 ---WREAEKFCTSQGAHLASVTSQEEQAFLVQTTSSGDHWIGLTDQGTEGIWRWVDGTPF 489

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
             A+         K     + H    +   +  ++  N      ++       TG++ A
Sbjct: 490 NNAQSKGF---WGKNQPDNWRHRNGEREDCVHVRQQWNDMACGSSYPWVCKKSTGWSAA 545


>gi|2497642|sp|P70194|CLC4F_MOUSE RecName: Full=C-type lectin domain family 4 member F; AltName:
           Full=C-type lectin superfamily member 13; Short=C-type
           lectin 13; AltName: Full=Kupffer cell receptor
 gi|1669360|dbj|BAA13647.1| Kupffer cell receptor [Mus musculus]
 gi|15489066|gb|AAH13647.1| C-type lectin domain family 4, member f [Mus musculus]
          Length = 548

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 51/179 (28%), Gaps = 19/179 (10%)

Query: 57  TKLMTAYV------------VFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           TK +TA +              +  K+++      + +     +Y   N  +        
Sbjct: 374 TKALTAKIQGEQNRLGALQEAVAAQKQEQKTQNQVLQLIAQNWKYFNGNFYYFSRDKKP- 432

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
               +       +  A   + +  + +   VQ  ++    +GL+          V    +
Sbjct: 433 ---WREAEKFCTSQGAHLASVTSQEEQAFLVQTTSSGDHWIGLTDQGTEGIWRWVDGTPF 489

Query: 165 TTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
             A+         K     + H    +   +  ++  N      ++       TG++ A
Sbjct: 490 NNAQSKGF---WGKNQPDNWRHRNGEREDCVHVRQQWNDMACGSSYPWVCKKSTGWSAA 545


>gi|284007682|emb|CBA73418.1| beta-lactamase/D-alanine carboxypeptidase [Arsenophonus nasoniae]
          Length = 430

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 2/98 (2%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           PD     ASLTKLMT+ V+     +KK  +T P+        + P  +  +      L +
Sbjct: 104 PDSLIRIASLTKLMTSEVMIKLEADKKLRITDPLQNYSYFGTHIPIYNGKEPIRLYHLAS 163

Query: 107 AL--KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTS 142
                                        +++      
Sbjct: 164 HTSGLPREQPGGKIGRTVFVWPTQTNRWAWLKKAKMKC 201


>gi|254966861|gb|ACT97447.1| HOA-1 beta-lactamase [uncultured organism]
          Length = 293

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 24/90 (26%), Gaps = 9/90 (10%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK----LPYYTL----LDTNTGHVIAENYPDHPWN 52
          M+++     + +    F   ++              +    +++  G        +    
Sbjct: 1  MKKYFSFCLLGIFIFCFSQQNLKRDITKIIQSKNALVAVSVMNSK-GKTEVNINGNKKVP 59

Query: 53 PASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            S+ K   A  V   +      L   I +
Sbjct: 60 MLSVFKFHIALAVLDLVDRGILDLEQNIFV 89


>gi|253699236|ref|YP_003020425.1| penicillin-binding protein transpeptidase [Geobacter sp. M21]
 gi|251774086|gb|ACT16667.1| penicillin-binding protein transpeptidase [Geobacter sp. M21]
          Length = 444

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 15/79 (18%)

Query: 32  TLLDTNTGHVIA-----------ENYPDHPWNP-ASLTKLMTAYVVFSFLKEKKAMLTTP 79
             ++  TG ++A           E   ++   P ASL K++TA       K       T 
Sbjct: 144 VAMEPRTGRILATVSHSSVEPGWEKDGNYHLYPLASLFKIVTATAALESKK---VTPDTL 200

Query: 80  ITISKNASEYPPSNSTFKK 98
              +   +   P       
Sbjct: 201 FAFNGRLTSESPKYWRVHP 219


>gi|149201707|ref|ZP_01878681.1| beta-lactamase precursor [Roseovarius sp. TM1035]
 gi|149144755|gb|EDM32784.1| beta-lactamase precursor [Roseovarius sp. TM1035]
          Length = 306

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 26/88 (29%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
            +  +  +  AS  K M    V   + E    L   I I           +    G TM+
Sbjct: 75  SHRAEERFLMASTFKTMLCGAVLHRVDEGDLDLEERIAIEAAEVLEYAPVTEKMVGETMS 134

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTE 131
           +       +  S N     + + +   +
Sbjct: 135 VGELCHAALDMSDNTATNLLIDRIEGPQ 162


>gi|172057974|ref|YP_001814434.1| peptidoglycan glycosyltransferase [Exiguobacterium sibiricum
           255-15]
 gi|171990495|gb|ACB61417.1| Peptidoglycan glycosyltransferase [Exiguobacterium sibiricum
           255-15]
          Length = 712

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 24/101 (23%)

Query: 32  TLLDTNTGHVIA-----ENYPD-------------HPWNPASLTKLMTAYVVFSF----- 68
            ++D  TG ++A        P+               + P S  K+ T            
Sbjct: 272 IVMDAKTGEILAMTDRPSFNPNLRDMTDFTNFAVSSRFEPGSTMKIFTLAAAIDAGVFRP 331

Query: 69  -LKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
               K        T+ K+ ++         +G   + +   
Sbjct: 332 NEPYKSGSYNYKGTVIKDYNDVGWGTIPMIEGVYHSSNVMF 372


>gi|329964561|ref|ZP_08301615.1| penicillin-binding protein, transpeptidase domain protein
           [Bacteroides fluxus YIT 12057]
 gi|328524961|gb|EGF52013.1| penicillin-binding protein, transpeptidase domain protein
           [Bacteroides fluxus YIT 12057]
          Length = 707

 Score = 37.3 bits (84), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 21/130 (16%)

Query: 31  YTLLDTNTGHV-------------IAENYPDHP---WNPASLTKLMTAYVVFSFLKEKKA 74
             L++  TG V               E   +       P S  K  +  V      + K 
Sbjct: 265 AVLMEVATGEVKAIVNMMKANDGNYYEMNSNAISDMLEPGSTFKTASIMVALE---DGKI 321

Query: 75  MLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              T +           S               N  ++L V S   ++  I +      +
Sbjct: 322 TPDTEVDTGNGIMNMYGSKMRDHNWHRGGYGKINVTRILEVSSNVGVSYLIDKHYKDNPQ 381

Query: 133 KFVQHMNNTS 142
           KFV  +   S
Sbjct: 382 KFVDGLKRMS 391


>gi|326773850|ref|ZP_08233132.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces viscosus C505]
 gi|326635989|gb|EGE36893.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Actinomyces viscosus C505]
          Length = 472

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
             +++D  TG  + +        PAS  K++TA+   S +    
Sbjct: 102 TASVVDVATGEELLDRSAASGVTPASTNKVLTAWAALSSMGPGH 145


>gi|303228855|ref|ZP_07315668.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516475|gb|EFL58404.1| conserved hypothetical protein [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 271

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 77/240 (32%), Gaps = 17/240 (7%)

Query: 6   VIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGH---VIAENYPDHPWNPASLTKLMTA 62
           +I+  ++   +   L    ++    Y +   N G    ++A +        AS+ K +  
Sbjct: 4   LIVGKSLEIQLAALLDTLPSDATVSYMVTRLNEGEEATIVASSKETIVHTGASMVKTLIL 63

Query: 63  YVVFSFLKEKKAMLTTPITISKNASEYP-PSNSTFKKGSTMTLDNALKLLIVKSANDIAV 121
             VF    +++  L   I +S++       +        + +     +L++V S N    
Sbjct: 64  EYVFHLAAQEQLDLNDTIALSRSPRVEGAGALMELVGNHSFSYLELCRLMMVLSDNWATN 123

Query: 122 AIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV-----QHGHYTTARDMAILSWR 176
            + ++L       ++++N  ++ LGL                    +Y TA DMA+L   
Sbjct: 124 LLIQAL------GMENINARAEQLGLEYFEINRMMMDFTAVKENRENYITAMDMAVLLHH 177

Query: 177 IKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGD 236
           I         +       +  +++ +              KTG       +         
Sbjct: 178 IYELRHTIYGH--EMWNILGRQQFRDILPFHWGEDVIFHHKTGSLDCVEHDAGIIETMNG 235


>gi|237748208|ref|ZP_04578688.1| beta-lactamase [Oxalobacter formigenes OXCC13]
 gi|229379570|gb|EEO29661.1| beta-lactamase [Oxalobacter formigenes OXCC13]
          Length = 312

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 44/163 (26%), Gaps = 16/163 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLD--TNTGHVI--------AENYPDHP 50
           M   L    +   S +   L            + D     G VI        A    +  
Sbjct: 1   MSTLLASFTLVTASCLASPLQENID-----AIVKDKPAQIGVVIEGFDPHQHAGFNENTR 55

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           +   S+ K   A  V   + + K  L   + +  +      ++S  ++            
Sbjct: 56  FPMQSVFKFPVALAVLDQVDKGKINLDETLLLKPSDLLPN-THSPLREKYPEANAAVSIG 114

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
            I+      +      +        Q ++   KNLG++     
Sbjct: 115 EIINETVSNSDNNGCDILLRLVGGPQAVDQYIKNLGIADMQIA 157


>gi|302545275|ref|ZP_07297617.1| beta-lactamase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462893|gb|EFL25986.1| beta-lactamase [Streptomyces himastatinicus ATCC 53653]
          Length = 396

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                DT+TG    +  P+  +  AS+TK+  A V+     E +  L  
Sbjct: 77  SAGYADTDTGR---KRSPEDHFRAASITKMFIATVLLQLEAEGRLSLDD 122


>gi|297202687|ref|ZP_06920084.1| beta-lactamase [Streptomyces sviceus ATCC 29083]
 gi|197713262|gb|EDY57296.1| beta-lactamase [Streptomyces sviceus ATCC 29083]
          Length = 377

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 24/80 (30%), Gaps = 18/80 (22%)

Query: 15  NIFPFLSIAETNKLPYYTLL---------------DTNTGHVIAENYPDHPWNPASLTKL 59
            +   L+           +                D  +G       PD  +   S TK+
Sbjct: 39  ALRAALAGLPDANATAALVRVGGTDGTWRGSSGVHDLASGRP---ADPDARFRAGSTTKV 95

Query: 60  MTAYVVFSFLKEKKAMLTTP 79
           +TA  V   + E +  L TP
Sbjct: 96  VTAAAVLRLVAEGRIDLDTP 115


>gi|4775480|emb|CAB42615.1| beta-lactamase OXY-1a [Klebsiella oxytoca]
          Length = 291

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 66/238 (27%), Gaps = 11/238 (4%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
            G KTG       N +A     +   L+ V         A  R      +A +++ G 
Sbjct: 234 VGDKTGAGDYGTTNDIAVIWPENHAPLVPVTYFTQPQQDAKSRKKVLAAAAKIVTEGL 291


>gi|313890668|ref|ZP_07824295.1| penicillin-binding protein 2X [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313120979|gb|EFR44091.1| penicillin-binding protein 2X [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 750

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/135 (8%), Positives = 32/135 (23%), Gaps = 26/135 (19%)

Query: 30  YYTLLDTNTGHVIA-----ENYPDHP------------------WNPASLTKLMTAYVVF 66
             TL++  TG ++A         D                    + P S  K+MT     
Sbjct: 291 SATLVNAKTGEILATSQRPSYNADTLEGLNNKKYNWKSALYQNNFEPGSTMKVMTLAAAI 350

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                         + +        +   +     ++    +      + +         
Sbjct: 351 DE---GVFKPNEVYSNANGLKIADATIQDWSINEGISTGQYMTYAQGFAYSSNVGMTKLE 407

Query: 127 LCKTEKKFVQHMNNT 141
                K ++ +++  
Sbjct: 408 QKMGNKTWLDYLSKF 422


>gi|86742322|ref|YP_482722.1| penicillin-binding protein, transpeptidase [Frankia sp. CcI3]
 gi|86569184|gb|ABD12993.1| penicillin-binding protein, transpeptidase [Frankia sp. CcI3]
          Length = 563

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 9/63 (14%)

Query: 30  YYTLLDTNTGHVIA---------ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
               +DT TG ++A                + P S  K++TA       K     L    
Sbjct: 283 AMVAIDTRTGAILALANHPPSGSSRAVRGKYPPGSTFKIVTATAALMNGKAPDMPLDCTQ 342

Query: 81  TIS 83
           T+S
Sbjct: 343 TVS 345


>gi|78043714|ref|YP_359208.1| peptidoglycan biosynthesis transpeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995829|gb|ABB14728.1| peptidoglycan biosynthesis transpeptidase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 650

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 53/251 (21%), Gaps = 60/251 (23%)

Query: 11  AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI------------------------AENY 46
           ++   I    +     +      LD  +G V+                            
Sbjct: 238 SLKKTIAALQNRYPDARAGAVVALDVRSGEVLAMASYPTFDPAAFPKGLTQKQVDEYIRN 297

Query: 47  PDHPW---------NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFK 97
           PD P           P S  K++T              L    T S+   +        +
Sbjct: 298 PDRPLYNRAVSATYPPGSTFKMVTGMAAL---------LNRVTTPSETIFDPGYYKLGNR 348

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                       +  VK+  +       ++ +     V+ +    K  GL     ++  G
Sbjct: 349 AFKDWNPRGHGVVNFVKAIKESCNVYFWTMARRL--GVEKIVEVGKQFGLGMMTGIDLPG 406

Query: 158 -------VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEI---------KGKKYP 201
                    +    T    +                    +             + KK  
Sbjct: 407 ESSGLLPTPEWKKETNTAIIEKNLKPKIDKIKSDYEQRIARAKTSEEKKRLEAERDKKIQ 466

Query: 202 NTNWAVGTFLG 212
             N  +  +  
Sbjct: 467 AINRQIEIYRW 477


>gi|24378542|ref|NP_720497.1| hypothetical protein SMU.12 [Streptococcus mutans UA159]
 gi|24376390|gb|AAN57803.1|AE014853_10 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 404

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 8/112 (7%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST---- 101
             D     AS+TKL   Y +   +K+ +  LT      +  +++  +      G      
Sbjct: 198 NEDKSMYSASVTKLPILYFIEKQIKDGRVKLTDKFKYIEQVNQFKGAYKVEGSGEMPKKA 257

Query: 102 ----MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                T+D+ LK +   S N  +  +   +     K  Q       ++  + 
Sbjct: 258 DNKYYTVDSLLKAVTQHSDNVASNILGYYIAHQYDKTYQKTVLRVADVKWNM 309


>gi|258448896|ref|ZP_05697005.1| beta-lactamase [Staphylococcus aureus A6224]
 gi|257857792|gb|EEV80684.1| beta-lactamase [Staphylococcus aureus A6224]
 gi|270055365|gb|ACZ58858.1| Beta-lactamase [Staphylococcus aureus]
 gi|270299842|gb|ACZ68648.1| Beta-lactamase [Staphylococcus aureus]
 gi|282166353|gb|ADA80369.1| Beta-lactamase [Staphylococcus epidermidis]
 gi|282166796|gb|ADA80812.1| Beta-lactamase [Staphylococcus aureus]
          Length = 281

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKGLGDKVTNPVRYE 157


>gi|38155789|gb|AAR12676.1| beta-lactamase [Staphylococcus aureus]
          Length = 179

 Score = 37.3 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +++IA+A++ +     S             N       LDT +G    +   D  +
Sbjct: 1   MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALDTKSGKE-VKFNADKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   + I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKVHINKDDIVAYSPILEKYVGKDITLKALIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|332667164|ref|YP_004449952.1| beta-lactamase [Haliscomenobacter hydrossis DSM 1100]
 gi|332335978|gb|AEE53079.1| beta-lactamase [Haliscomenobacter hydrossis DSM 1100]
          Length = 497

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 27/109 (24%), Gaps = 33/109 (30%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN------KLPY-----------YTLLDTNTGHVIA 43
           M+    +  +++        ++                           + D   G VI 
Sbjct: 1   MKNTFFLFVISLFCQTLFAQNLNSQIQEFDTYAAKAMAAWQMPGMAVAIVKD---GKVIF 57

Query: 44  EN-------------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           +                   ++ AS TK MTA  +   + E K      
Sbjct: 58  KKGYGVRELGATNAVNTQTQFSCASTTKAMTAVCMAILVDEGKVNWDDH 106


>gi|330994429|ref|ZP_08318354.1| Peptidoglycan synthase ftsI [Gluconacetobacter sp. SXCC-1]
 gi|329758429|gb|EGG74948.1| Peptidoglycan synthase ftsI [Gluconacetobacter sp. SXCC-1]
          Length = 674

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 27/135 (20%)

Query: 31  YTLLDTNTGHVI-------AENY------PDHPW--------NPASLTKLMTAYVVFSFL 69
             ++D +TG +I        +        PD  +         P S  KL T  +     
Sbjct: 257 AIVMDVHTGEIITMVSLPDYDANDFGRAAPDARFNRAVTGMYEPGSTFKLQTTAMALQEG 316

Query: 70  KEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND-IAVAIAESLC 128
                        S    +      +  K         L  ++  S+N   A    ++  
Sbjct: 317 VAHIWD-----RFSSTPIKIGRFTISDMKSDHFDPWLTLPEVMAYSSNPAAAHIALDAGA 371

Query: 129 KTEKKFVQHMNNTSK 143
             ++ +++ M   S+
Sbjct: 372 ARQQDWLRRMGFFSR 386


>gi|227834069|ref|YP_002835776.1| putative penicillin-binding protein 4 [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262183445|ref|ZP_06042866.1| putative penicillin-binding protein 4 [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227455085|gb|ACP33838.1| putative penicillin-binding protein 4 [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 428

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKL 59
           ++DT T  V+ E  P  P  PAS TK+
Sbjct: 84  VIDTTTHEVLWEREPAKPLTPASATKV 110


>gi|115039|sp|P14559|BLAC_STRAL RecName: Full=Beta-lactamase; AltName: Full=Penicillinase; Flags:
           Precursor
 gi|153339|gb|AAA26775.1| beta-lactamase [Streptomyces albus]
          Length = 314

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 63/231 (27%), Gaps = 10/231 (4%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP-- 91
            DT +G  +A    D  +   S+ K +++  V   L      L+  I  +++  E     
Sbjct: 69  YDTGSGRTVAYR-ADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRILYTQDDVEQADGA 127

Query: 92  ----SNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNL 145
                       + +T++   ++ I  S N  A  +           +FV+ + +    L
Sbjct: 128 GPETGKPQNLANAQLTVEELCEVSITASDNCAANLMLRELGGPAAVTRFVRSLGDRVTRL 187

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW 205
                   +A         +           +  D         +    +      +   
Sbjct: 188 DRWEPELNSAEPGRVTDTTSPRAITRTYGRLVLGDALNPRDRRLLTSWLLANTTSGDRFR 247

Query: 206 AVGTFLGADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
           A        G KTG       N         +  ++  +L A       + 
Sbjct: 248 AGLPDDWTLGDKTGAGRYGTNNDAGVTWPPGRAPIVLTVLTAKTEQDAARD 298


>gi|302523637|ref|ZP_07275979.1| predicted protein [Streptomyces sp. AA4]
 gi|302432532|gb|EFL04348.1| predicted protein [Streptomyces sp. AA4]
          Length = 287

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 12/38 (31%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
              + D  TG           +  ASL KL+ A     
Sbjct: 79  SVVVYDRATGTTPVSVDAHRRYTSASLVKLLIALDALD 116


>gi|261340966|ref|ZP_05968824.1| beta-lactamase [Enterobacter cancerogenus ATCC 35316]
 gi|288316829|gb|EFC55767.1| beta-lactamase [Enterobacter cancerogenus ATCC 35316]
          Length = 388

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D     ASLTKLMT+ ++   L +    L  P
Sbjct: 82  DSVIRIASLTKLMTSELLVKLLDQGVVKLDDP 113


>gi|330934649|ref|XP_003304638.1| hypothetical protein PTT_17287 [Pyrenophora teres f. teres 0-1]
 gi|311318653|gb|EFQ87270.1| hypothetical protein PTT_17287 [Pyrenophora teres f. teres 0-1]
          Length = 569

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 11/34 (32%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             D  +  AS+TK  T   +    +     L   
Sbjct: 94  NGDALYRIASITKTFTILSLLYQHEAGNLSLDDM 127


>gi|312865770|ref|ZP_07725992.1| conserved hypothetical protein [Streptococcus downei F0415]
 gi|311098645|gb|EFQ56867.1| conserved hypothetical protein [Streptococcus downei F0415]
          Length = 432

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 24  ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITIS 83
             +      +   ++G V A+   D P   AS++KL   Y V   L + K   +  +T S
Sbjct: 205 ADSSKYSIYVKQLDSGKV-AQINADKPMYSASVSKLPLLYYVQDQLNKGKIKASQSLTYS 263


>gi|291085784|ref|ZP_06354051.2| beta-lactamase [Citrobacter youngae ATCC 29220]
 gi|291069840|gb|EFE07949.1| beta-lactamase [Citrobacter youngae ATCC 29220]
          Length = 407

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D     AS+TKLMT+ V+   L +    L  P
Sbjct: 102 DSVIRIASITKLMTSEVLVKLLDQGTVKLNDP 133


>gi|84514351|ref|ZP_01001715.1| penicillin-binding protein 2 [Loktanella vestfoldensis SKA53]
 gi|84511402|gb|EAQ07855.1| penicillin-binding protein 2 [Loktanella vestfoldensis SKA53]
          Length = 646

 Score = 37.3 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/105 (9%), Positives = 26/105 (24%), Gaps = 11/105 (10%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +A       + P S  K++T                  +      ++   +     K   
Sbjct: 314 LAAKAVQGTYPPGSTFKMVTLLAAMEA---GVITAEDTVYC-PGYADVGGTRFHCWKRGG 369

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLG 146
               N  + +                   ++  ++ M   ++ LG
Sbjct: 370 HGNMNLHESVKQSCD-------VYYYDIAQRVGIEKMAEMARKLG 407


>gi|303238076|ref|ZP_07324616.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella disiens FB035-09AN]
 gi|302481711|gb|EFL44766.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella disiens FB035-09AN]
          Length = 437

 Score = 37.3 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 11/42 (26%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
            + D      +          PAS  K +TA      L    
Sbjct: 96  MVWDLTDNKQVYAFNERKHLRPASTMKCVTAITALDRLGCNY 137


>gi|118469316|ref|YP_891026.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
 gi|118170603|gb|ABK71499.1| beta-lactamase [Mycobacterium smegmatis str. MC2 155]
          Length = 303

 Score = 37.3 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 39/154 (25%), Gaps = 5/154 (3%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTA--YVVFSFLKEKKAMLTTPITISKNASE 88
             +LD NTG V   N  + P+  AS+ KL  A   ++     + +       ++      
Sbjct: 83  AVVLDRNTGEV-VSNGSNKPFPIASVVKLFIADDLLLQESEGKTELSPADRKSLDVMLRS 141

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL--G 146
              S +              ++                   T+      ++     L  G
Sbjct: 142 SDDSAAQMFWDRLGGNAVISRIKARYGLPGTIAPYNGHWDVTQSTAADLVHYYDMLLNGG 201

Query: 147 LSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
                      V    H+T +            D
Sbjct: 202 GGLPREQADVIVDNLAHFTPSGTDGYPQRFGIPD 235


>gi|257794502|ref|ZP_05643481.1| beta-lactamase [Staphylococcus aureus A9781]
 gi|295407603|ref|ZP_06817395.1| beta-lactamase [Staphylococcus aureus A8819]
 gi|537338|gb|AAA26644.1| beta-lactamase [Staphylococcus aureus]
 gi|257788474|gb|EEV26814.1| beta-lactamase [Staphylococcus aureus A9781]
 gi|270055431|gb|ACZ58924.1| Beta-lactamase [Staphylococcus aureus]
 gi|270055547|gb|ACZ59040.1| Beta-lactamase [Staphylococcus aureus]
 gi|270269137|gb|ACZ66129.1| Beta-lactamase [Staphylococcus aureus]
 gi|270299756|gb|ACZ68562.1| Beta-lactamase [Staphylococcus aureus]
 gi|270300004|gb|ACZ68810.1| Beta-lactamase [Staphylococcus aureus]
 gi|281334174|gb|ADA61258.1| Beta-lactamase [Staphylococcus aureus]
 gi|281334755|gb|ADA61839.1| Beta-lactamase [Staphylococcus aureus]
 gi|281334805|gb|ADA61889.1| Beta-lactamase [Staphylococcus aureus]
 gi|282166004|gb|ADA80024.1| Beta-lactamase [Staphylococcus aureus]
 gi|294967553|gb|EFG43590.1| beta-lactamase [Staphylococcus aureus A8819]
 gi|312831081|emb|CBX35921.1| beta-lactamase (Penicillinase) [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|320139784|gb|EFW31650.1| beta-lactamase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|329723910|gb|EGG60436.1| beta-lactamase [Staphylococcus aureus subsp. aureus 21172]
          Length = 281

 Score = 37.3 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKKLNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQIPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|114566357|ref|YP_753511.1| peptidoglycan glycosyltransferase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337292|gb|ABI68140.1| Peptidoglycan glycosyltransferase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 705

 Score = 37.3 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 21/65 (32%)

Query: 25  TNKLPYYTLLDTNTGHVIA---------------------ENYPDHPWNPASLTKLMTAY 63
             K     ++D +TG ++A                         +  + P S  K+ TA 
Sbjct: 242 KAKSAAAIIMDVSTGEILALASRPTFDPNDFSAYAVSNRRNYGINDSYEPGSTMKITTAA 301

Query: 64  VVFSF 68
           +    
Sbjct: 302 MALQE 306


>gi|281427751|ref|YP_003347954.1| beta-lactamase [Staphylococcus aureus]
 gi|281307465|gb|ADA57912.1| beta-lactamase [Staphylococcus aureus]
          Length = 281

 Score = 37.3 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|256420480|ref|YP_003121133.1| beta-lactamase [Chitinophaga pinensis DSM 2588]
 gi|256035388|gb|ACU58932.1| Beta-lactamase [Chitinophaga pinensis DSM 2588]
          Length = 295

 Score = 37.3 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 83/280 (29%), Gaps = 38/280 (13%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLP--------------YYTLLDTNTGHVIAENY 46
           M+  ++  ++A+   +    S A+ N                    ++    G       
Sbjct: 1   MKNRILSCSLALPFLLLSIHSSAQDNNTRQKVNEIAATARGHVGVAMMSLENGDT-MTLN 59

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKN---ASEYPPSNSTFKKGSTMT 103
            +  +   S+ K+  A  V   + + K  L   I I+K       + P    + +G+ + 
Sbjct: 60  GNDHFPMQSVFKVPLAIAVLDQVDKGKLSLDQVIHITKKELLPFTWSPIREKYPEGTDLK 119

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM------NAHG 157
           L   L   + +S N+    +   +         ++      LG+ +           +  
Sbjct: 120 LREVLAYTVSQSDNNGCDILFNLV-----GGTAYVEQYIHGLGVDSMAIKANEERMASAW 174

Query: 158 VVQHGHYTTARDMAILSW-----RIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
            VQ+ ++++      L       +  +          +K      K+      A      
Sbjct: 175 KVQYTNWSSPLATLQLLKGIHTGKYLSKASNDFLLKIMKETTTGPKRLRGMLPADAVVAH 234

Query: 213 ADG---MKTGFTCASGFNIVASAIQGDQSLIAVILGALDR 249
             G    K G T A+    + +       L  V+  +  +
Sbjct: 235 KTGSSDTKDGLTAATNDAGIVTLP-DGSHLAIVVFVSDTK 273


>gi|300933360|ref|ZP_07148616.1| penicillin-binding protein [Corynebacterium resistens DSM 45100]
          Length = 638

 Score = 37.3 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 21/69 (30%), Gaps = 24/69 (34%)

Query: 26  NKLPYYTLLDTNTGHVIA------------------------ENYPDHPWNPASLTKLMT 61
            K     +LD+ TG +++                        +      + P S+ K+MT
Sbjct: 291 AKSVSAVVLDSKTGKILSLASSDSINPNGDIEKQLKQKKVFGDRNTADSFEPGSVAKIMT 350

Query: 62  AYVVFSFLK 70
           A       K
Sbjct: 351 AAAAIEEKK 359


>gi|214091189|gb|ACJ63454.1| PenB class A beta-lactamase [Burkholderia cenocepacia]
          Length = 312

 Score = 37.3 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 66/226 (29%), Gaps = 5/226 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G VI E+     +   S  K M +  V +   E+  +L   +  +K         
Sbjct: 73  IDTASGRVI-EHRAGERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVKYTKADLVNYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    G+ MT+    +  I  S N  A  + +          + + + + +  L    T 
Sbjct: 132 SEKHVGAGMTVAALCEATIQYSDNSAANLLMKLIGGPSAVTAYARSIGDDAFRLDRWETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A +      D        Q+       K       A     
Sbjct: 192 LNTALPGDPRDTTTPAAMAASIRVLTLGDALPAAQRAQLVAWLRGNKVGDKRIRAGVPAG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR-NTRNKV 255
              G KTG       N         +  ++  +     R + R K 
Sbjct: 252 WTVGDKTGTGDYGTTNDAGVIWPTSRAPIVLAVYYTQTRADARAKD 297


>gi|85704238|ref|ZP_01035341.1| beta lactamase [Roseovarius sp. 217]
 gi|85671558|gb|EAQ26416.1| beta lactamase [Roseovarius sp. 217]
          Length = 287

 Score = 37.3 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 63/220 (28%), Gaps = 5/220 (2%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTL 104
           + P+  +  AS  K M    V S + +    L  P+ I++         +  + G TM+L
Sbjct: 57  HRPNERFLMASTFKAMLCGAVLSRVDKGTLALDEPLEITEQDILEYAPITESEIGKTMSL 116

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
                  +  S N  A  + + L    +   F++ + +    L                 
Sbjct: 117 GELCFAALDLSDNTAANLLIDRLGGPHEVTAFLRAIGDPVSRLDRREPDLNTFTPGDPRD 176

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTC 222
             T A   + L   +  D        Q+      G        A          K+G   
Sbjct: 177 TTTPAAMASTLETLLAGDALSPQSRAQLVKWMSAGGVTGALIRASTPKGWQVADKSGSGA 236

Query: 223 ASGFNIVASAIQGDQSLIAVILGAL---DRNTRNKVSASL 259
            +   +           +  +  +    D  TRN    +L
Sbjct: 237 YNRNIVAMVTPPDQSPYVITMFLSDADADFATRNAAVITL 276


>gi|225907438|gb|ACO36252.1| beta-lactamase Pen-B4 [Burkholderia cenocepacia]
          Length = 312

 Score = 37.3 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 67/226 (29%), Gaps = 5/226 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G VI E+     +   S  K M +  V +   E+  +L   +T +K         
Sbjct: 73  IDTASGRVI-EHRAGERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVTYTKADLVNYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    G+ MT+    +  I  S N  A  + +          + + + + +  L    T 
Sbjct: 132 SEKHVGAGMTVAALCEATIQYSDNSAANLLMKLIGGPSAVTAYARSIGDDAFRLDRWETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A +      D        Q+       K       A     
Sbjct: 192 LNTALPGDPRDTTTPAAMAASIRVLTLGDALPAAQRAQLVAWLRGNKVGDKRIRAGVPAG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR-NTRNKV 255
              G KTG       N         +  ++  +     R + R K 
Sbjct: 252 WTVGDKTGTGDYGTTNDAGVIWPTSRAPIVLAVYYTQTRADARAKD 297


>gi|37931484|gb|AAP69225.1| OXA-47 [Klebsiella pneumoniae]
          Length = 276

 Score = 37.3 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/233 (10%), Positives = 60/233 (25%), Gaps = 16/233 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY--------YTLLDTNTGHVIAENYPDH---PWN 52
           F + + +A +       S   +             + L D +T   IA+           
Sbjct: 9   FAIFLIIANIIYSSASASTDISTVASQLFEGTEGCFLLYDASTNAEIAQFNKAKCAAQMA 68

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           P S  K+  + + F      +  +     I K    +  +++         +  + ++  
Sbjct: 69  PDSTFKIALSLMAFDAEIIDQKTIFKWDKIPKGMEIWNSNHTPKTWMQFSVVWVSQEITQ 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-----NAHGVVQHGHYTTA 167
               N I   + +     +        N         +            + +  ++   
Sbjct: 129 KIGLNKIKNYLKDFDYGNQDFSGDKERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLP 188

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
              + +   I   + Q +        +       N     G F G    K+G 
Sbjct: 189 VRNSAIENTIDNMYLQDLENSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGH 241


>gi|291484447|dbj|BAI85522.1| penicillin-binding protein [Bacillus subtilis subsp. natto
          BEST195]
          Length = 501

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 22/77 (28%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY-------TLLD---------------TNT 38
          ++ ++ ++ + +++++      A   +            L D                 T
Sbjct: 15 IKLYVAVLLLFVIASVPYMHQAALAAEKQDALSGQIDKILADHPALEGAMAGITVRSAET 74

Query: 39 GHVIAENYPDHPWNPAS 55
          G V+ E+  D    PAS
Sbjct: 75 GAVLYEHSGDTRMRPAS 91


>gi|223044446|ref|ZP_03614478.1| beta-lactamase [Staphylococcus capitis SK14]
 gi|222442175|gb|EEE48288.1| beta-lactamase [Staphylococcus capitis SK14]
          Length = 281

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|330933568|ref|XP_003304219.1| hypothetical protein PTT_16715 [Pyrenophora teres f. teres 0-1]
 gi|311319302|gb|EFQ87676.1| hypothetical protein PTT_16715 [Pyrenophora teres f. teres 0-1]
          Length = 402

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
          +     AS TKLMTA      ++  +  L  P+ 
Sbjct: 53 NTVMWIASCTKLMTAICAMQLVERGQLRLDDPVY 86


>gi|260596740|ref|YP_003209311.1| beta-lactam binding protein AmpH [Cronobacter turicensis z3032]
 gi|260215917|emb|CBA28489.1| Penicillin-binding protein ampH [Cronobacter turicensis z3032]
          Length = 352

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          D     ASLTKLMT+ ++   L +    L  P
Sbjct: 47 DSVIRIASLTKLMTSEMLVKMLDQGVVKLDDP 78


>gi|149200951|ref|ZP_01877926.1| penicillin-binding protein 2 [Roseovarius sp. TM1035]
 gi|149145284|gb|EDM33310.1| penicillin-binding protein 2 [Roseovarius sp. TM1035]
          Length = 647

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 18/89 (20%), Gaps = 4/89 (4%)

Query: 51  WNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKL 110
           + P S  K++TA             L   +       E         K       +    
Sbjct: 323 YPPGSTFKMVTALAALEA---GDVSLQDTVYC-PGHLEISGRRFHCWKRGGHGNMDLHLS 378

Query: 111 LIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           L              +  +      + + 
Sbjct: 379 LRESCDVYYYELALRTGIENISAMAERLG 407


>gi|271961641|ref|YP_003335837.1| alkaline D-peptidase [Streptosporangium roseum DSM 43021]
 gi|270504816|gb|ACZ83094.1| alkaline D-peptidase [Streptosporangium roseum DSM 43021]
          Length = 392

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 4/126 (3%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
                DT TG    +  P   +   S TK  TA VV     E+K  L   +         
Sbjct: 69  SAGAADTETGR---KRRPHERFRIGSATKAFTATVVLQLAAERKLSLEDTVE-EWLPGLV 124

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
             +     K +   L N    +     +    A  +     E ++ ++       +GL+ 
Sbjct: 125 KGNGYDGSKITIRQLLNHSSGIFNYGNDKAFFATGQGAAWFEHRYDEYTPEQLVKIGLAN 184

Query: 150 THFMNA 155
             +   
Sbjct: 185 PPYFEP 190


>gi|297193337|ref|ZP_06910735.1| beta-lactamase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718346|gb|EDY62254.1| beta-lactamase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 460

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   S+TK  TA +V     E    L  P
Sbjct: 57 DADTQYRIGSITKTFTAVLVMRLRDEGLLGLDDP 90


>gi|159037056|ref|YP_001536309.1| Beta-lactamase [Salinispora arenicola CNS-205]
 gi|157915891|gb|ABV97318.1| Beta-lactamase [Salinispora arenicola CNS-205]
          Length = 300

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 59/225 (26%), Gaps = 6/225 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT TG        D  +   S  K + A  V        A L   +  S +        
Sbjct: 62  IDTGTGRT-VRYQADERFAYGSTFKALAAAEVLDETT--DAELEQVVRYSADDLVDYSPI 118

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
           +       MTL       +  S N     + E L   E+   +      K    +     
Sbjct: 119 TEQYVAEGMTLRAIADAAVRYSDNTAGNLLLEHLGGPERFEKELKGIGDKVTDAARYETA 178

Query: 154 NAHGVV-QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT-NWAVGTFL 211
                       +TAR +         D         I    ++G         A     
Sbjct: 179 LNEATPGDRRDTSTARALTEDLREYAVDDALEPADRDILNAWLRGNTTGGELIRAGVPDG 238

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDRNTRNKV 255
              G KTG       N +A     D+  ++  +L + D    +  
Sbjct: 239 WVVGDKTGSAGYGTRNDIAVIWPPDRAPIVLAVLSSRDEQDASYD 283


>gi|29566662|ref|NP_818228.1| gp169 [Mycobacterium phage Bxz1]
 gi|203459023|ref|YP_002224179.1| gp168 [Mycobacterium phage ScottMcG]
 gi|203460669|ref|YP_002224403.1| gp171 [Mycobacterium phage Spud]
 gi|204305807|ref|YP_002224624.1| gp169 [Mycobacterium phage Cali]
 gi|29425387|gb|AAN16811.1| gp169 [Mycobacterium phage Bxz1]
 gi|197312250|gb|ACH62606.1| gp171 [Mycobacterium phage Spud]
 gi|197312470|gb|ACH62825.1| gp168 [Mycobacterium phage ScottMcG]
 gi|197312780|gb|ACH63133.1| gp169 [Mycobacterium phage Cali]
 gi|255928054|gb|ACU41673.1| gp166 [Mycobacterium phage LRRHood]
          Length = 358

 Score = 36.9 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          D  +  AS+TK +TA  +   + + K  L  
Sbjct: 57 DAKFRAASVTKTLTAMAILREVDKGKISLDD 87


>gi|300780112|ref|ZP_07089968.1| penicillin binding protein transpeptidase domain protein
           [Corynebacterium genitalium ATCC 33030]
 gi|300534222|gb|EFK55281.1| penicillin binding protein transpeptidase domain protein
           [Corynebacterium genitalium ATCC 33030]
          Length = 484

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 40/126 (31%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           ++AMA   +  P   +        +  ++ + G  +          P S+ K++T     
Sbjct: 167 VLAMASNPSYDPNSIVNPDTADSAWQAVNEDPGKPLLNQAAQEQLPPGSIFKIITTAAGL 226

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                  + LT    I+   +E   +N   K       + +L      S N   V +A  
Sbjct: 227 RAGYTPDSQLTAEAAITLPGTEVQLTNYGGKACGGGGGETSLTQAFTLSCNTAFVEMATE 286

Query: 127 LCKTEK 132
           +     
Sbjct: 287 IGDEPM 292


>gi|109393362|ref|YP_656160.1| gp169 [Mycobacterium phage Catera]
 gi|203457498|ref|YP_002224844.1| gp168 [Mycobacterium phage Rizal]
 gi|91981184|gb|ABE67899.1| gp169 [Mycobacterium phage Catera]
 gi|197312026|gb|ACH62383.1| gp168 [Mycobacterium phage Rizal]
          Length = 358

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          D  +  AS+TK +TA  +   + + K  L  
Sbjct: 57 DAKFRAASVTKTLTAMAILREVDKGKISLDD 87


>gi|295822191|gb|ADG36749.1| extended-spectrum class A beta-lactamase [Rahnella sp. 34-Carrot]
 gi|295822227|gb|ADG36767.1| extended-spectrum class A beta-lactamase [Rahnella sp. 56-Salad]
          Length = 218

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   ++++K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLTKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|288801383|ref|ZP_06406837.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331766|gb|EFC70250.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella sp. oral taxon 299 str. F0039]
          Length = 423

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 12/37 (32%)

Query: 32  TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            + D      I +        PAS  KL+TA      
Sbjct: 82  MVYDITADSTIFQFNEKQLLRPASTMKLITAITALDK 118


>gi|226360341|ref|YP_002778119.1| hypothetical protein ROP_09270 [Rhodococcus opacus B4]
 gi|226238826|dbj|BAH49174.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 271

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNP-ASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  +L  + G VI E        P AS+TKL+ AY V    +E    L  P
Sbjct: 11 PVDNAAAVVLSRDDG-VIGEYGDQQRVFPLASVTKLLCAYAVLVATEEGAVELDQP 65


>gi|21222416|ref|NP_628195.1| secreted penicillin-binding protein [Streptomyces coelicolor A3(2)]
 gi|256786511|ref|ZP_05524942.1| secreted penicillin-binding protein [Streptomyces lividans TK24]
 gi|289770402|ref|ZP_06529780.1| secreted penicillin-binding protein [Streptomyces lividans TK24]
 gi|13122177|emb|CAC32353.1| putative secreted penicillin-binding protein [Streptomyces
           coelicolor A3(2)]
 gi|289700601|gb|EFD68030.1| secreted penicillin-binding protein [Streptomyces lividans TK24]
          Length = 495

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 7/124 (5%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD      +A       + P S  K++TA               T   +S        + 
Sbjct: 199 LDKKKNKPLANRALRETYPPGSTFKILTAAAALEHGIVTDVDARTD-AVSPYPLPQSTNK 257

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
              + G  +    ++K  +  S N++       L    K     M  T++  G +   + 
Sbjct: 258 IGSEAGDAVCNKASMKTAMQHSCNNV------FLDAASKLGQDKMRETAEKFGFNEDVYS 311

Query: 154 NAHG 157
           +  G
Sbjct: 312 DDFG 315


>gi|266619200|ref|ZP_06112135.1| beta-lactamase [Clostridium hathewayi DSM 13479]
 gi|288869291|gb|EFD01590.1| beta-lactamase [Clostridium hathewayi DSM 13479]
          Length = 281

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 12/207 (5%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNAS-EYPPSNSTFK 97
           G++I     D P+  AS  K      +F  +++ KA L   +   +  + +        +
Sbjct: 31  GNII-AIGADEPFETASTIKTYILACLFDQVEKGKASLEDMVEYKEEHTVDGSGVLCALE 89

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH- 156
            G+ + + +A  L+I+ S N     + + L       +  +N   + LG   T   N   
Sbjct: 90  PGAVLRVKDAATLMIIVSDNVATNMMIDYL------GLDTINACIRGLGCRDTVLYNPLH 143

Query: 157 -GVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADG 215
                    +T RD A +  R+                  K + Y +        +  D 
Sbjct: 144 FERYDKLGTSTPRDYASIFTRLAAGTLISPESDAKMLEIFKKQHYNSMITKDFPAVYMDS 203

Query: 216 MKT--GFTCASGFNIVASAIQGDQSLI 240
             T       +  +   +A + D  +I
Sbjct: 204 DNTDDVMVTVASKSGSMNACRNDGGII 230


>gi|221209528|ref|ZP_03582509.1| beta-lactamase [Burkholderia multivorans CGD1]
 gi|221170216|gb|EEE02682.1| beta-lactamase [Burkholderia multivorans CGD1]
          Length = 302

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 61/238 (25%), Gaps = 8/238 (3%)

Query: 10  MAMLSNIFPFLSIAETNKLPY---YTLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVV 65
            A      P    A             +DT TG   +     D  +   S  K M A  V
Sbjct: 36  AAFPVGASPASFAALERAAGGRLGVCAIDTATGRRALY--RADERFPFCSTFKAMLAAAV 93

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
            +       +L   +T  ++        +     + MT+       I  S N  A  + +
Sbjct: 94  LAQSVAHPGLLQQRVTYGRSDLVNYSPVTERHVDTGMTVAELCAATIQYSDNTAANELMK 153

Query: 126 SLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            +        + + + + +  L    T    A         T A   A L   +  D   
Sbjct: 154 RIGGPAAVTAYARSIGDDTFRLDRWETELNTALPGDLRDTTTPAAMAASLRVLVLGDALP 213

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIA 241
                Q+       K       A        G KTG       N         ++ I 
Sbjct: 214 PAQRAQLIEWLRGNKVGDKRIRAGVPTGWRVGDKTGTGDYGTTNDAGVLWPPSRAPIV 271


>gi|163941173|ref|YP_001646057.1| D-alanyl-D-alanine carboxypeptidase [Bacillus weihenstephanensis
           KBAB4]
 gi|163863370|gb|ABY44429.1| D-alanyl-D-alanine carboxypeptidase [Bacillus weihenstephanensis
           KBAB4]
          Length = 369

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 45/172 (26%), Gaps = 4/172 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    PD     AS  KL+ A      + E K   ++   +S N    
Sbjct: 51  SALLI-KRNDKVVYSVNPDVVLPVASTMKLIVALEYTKQVTEGKIDPSS--FVSINDVNR 107

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                T         +   K   +         +A+ + K               L    
Sbjct: 108 YYVPGTDGGAQDRWQNYLQKKEKITEGAVSLEEVAKGMVKFSSNANTEYLMEVLGLDNIN 167

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            +   +  +  H           +   +  +     +  + K  E+  ++Y 
Sbjct: 168 RNL-QSLALPAHQPLFPIVSSLYIPGYLHKELHVPKYKIEKKLKEMSQEQYR 218


>gi|91786967|ref|YP_547919.1| peptidoglycan synthetase FtsI [Polaromonas sp. JS666]
 gi|91696192|gb|ABE43021.1| peptidoglycan synthetase FtsI [Polaromonas sp. JS666]
          Length = 577

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 37/172 (21%), Gaps = 22/172 (12%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENY-----PDHP----------------WNPASLTK 58
              A   K     +LD  TG V+A        PD                  + P S  K
Sbjct: 244 AVTARKAKAGSVVVLDAITGEVLALANYPSYVPDKRQNLTGEQLRNRALTDTFEPGSTMK 303

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +T  +     + K   L       + +      + T   G+        K   V +   
Sbjct: 304 PITVAMALEAGRVKPQTLVETGP-GRFSIGGFTISDTHNYGTLTVEGVIQKSSNVGALKI 362

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
                   +  T            +  G                  T A   
Sbjct: 363 AQKMSPHEMWDTYTALGYGQKPQIQFPGAVTGRLRPWKSWRPVEQATMAYGY 414


>gi|83747061|ref|ZP_00944106.1| Beta-lactamase [Ralstonia solanacearum UW551]
 gi|207738499|ref|YP_002256892.1| oxacillin hydrolase (class-d beta-lactamase) protein [Ralstonia
           solanacearum IPO1609]
 gi|83726338|gb|EAP73471.1| Beta-lactamase [Ralstonia solanacearum UW551]
 gi|206591867|emb|CAQ58773.1| oxacillin hydrolase (class-d beta-lactamase) protein [Ralstonia
           solanacearum IPO1609]
          Length = 272

 Score = 36.9 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 32/122 (26%), Gaps = 1/122 (0%)

Query: 32  TLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  +G  +  E        PAS  K+  A + +     K            +     
Sbjct: 28  IVADAASGKPIRYEGQCGERVTPASTFKIALAVMGYDAGFLKDQHAPVLSFRQGDPDWGG 87

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                    S+    + +      +    A A    + +     +    +  +N GL  +
Sbjct: 88  ADWHRPTDPSSWIQYSVVWYSQRITHALGADAFQSYVRRFGYGNMDVSGDAGRNNGLDRS 147

Query: 151 HF 152
             
Sbjct: 148 WI 149


>gi|229086134|ref|ZP_04218354.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
 gi|228697193|gb|EEL49958.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-44]
          Length = 328

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/172 (9%), Positives = 43/172 (25%), Gaps = 4/172 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    P+     AS  KL+ A+     + + +    +   +S +    
Sbjct: 10  SALLI-KRNDKVVYSVNPNVVLPVASTMKLIVAFEFTKQVVDGRIDPNS--YVSIDDVNR 66

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
               +             ++   +         +A+ + K               L    
Sbjct: 67  YYVPNADGGAQDRWQKYLIRTDKIDGNAVPLEEVAKGMVKFSSNANTEYLMDRLGLDHIN 126

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            +  N   +  H           +   +  +        +    E+  ++Y 
Sbjct: 127 QNLQNL-SLPSHQPLFPIVSSLYIPGYLHKELHIPKDKLEKTLKEMPLEEYR 177


>gi|225867629|ref|YP_002743577.1| hypothetical protein SZO_00120 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225700905|emb|CAW97573.1| putative exported protein [Streptococcus equi subsp. zooepidemicus]
          Length = 428

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 44/204 (21%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAM-------LTTPITISKNASEYPPSNSTFKK 98
             D     AS++KL T Y V   LK            +        +         +   
Sbjct: 222 NADKQMYAASISKLATLYSVQKKLKSGSLSEGKSLKYIDEVNHFYGDYDPTGSGKISKTA 281

Query: 99  G-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +   LK +  +S N     +   LC    +  Q        +            
Sbjct: 282 DKKDYNVMELLKAVSQQSDNVATNILGYYLCNQYNQAFQSEIRALAGVDWDM-----EKR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     +   +  +       +       +     + 
Sbjct: 337 LLSSHAAANLMEAIYYQKGQIISYLSQTAFDDQRISKNISVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G            A   D + IA
Sbjct: 397 YGDNPFILSVFTDKASYDDITAIA 420


>gi|308387702|pdb|2WUQ|A Chain A, Crystal Structure Of Blab Protein From Streptomyces
          Cacaoi
 gi|308387703|pdb|2WUQ|B Chain B, Crystal Structure Of Blab Protein From Streptomyces
          Cacaoi
          Length = 318

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           + + D  TG  +    PD     ASL KL  A      ++  +      I ++      
Sbjct: 23 SFLVRDLYTGEEL-GIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITT 81

Query: 90 PPS 92
          P  
Sbjct: 82 PGP 84


>gi|281416086|ref|YP_003347822.1| gp160 [Mycobacterium phage ET08]
 gi|255927765|gb|ACU41386.1| gp160 [Mycobacterium phage ET08]
          Length = 358

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
          D  +  AS+TK +TA  +   + + K  L  
Sbjct: 57 DAKFRAASVTKTLTAMAILREVDKGKISLDD 87


>gi|581627|emb|CAA45315.1| ORF 2 [Streptomyces cacaoi]
          Length = 312

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           + + D  TG  +    PD     ASL KL  A      ++  +      I ++      
Sbjct: 23 SFLVRDLYTGEEL-GIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITT 81

Query: 90 PPS 92
          P  
Sbjct: 82 PGP 84


>gi|461628|sp|P33652|BLAB_STRCI RecName: Full=Beta-lactamase regulatory protein BlaB
 gi|216999|dbj|BAA00774.1| regulatory protein for beta-lactamase [Streptomyces cacaoi]
          Length = 312

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           + + D  TG  +    PD     ASL KL  A      ++  +      I ++      
Sbjct: 23 SFLVRDLYTGEEL-GIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRITT 81

Query: 90 PPS 92
          P  
Sbjct: 82 PGP 84


>gi|325578455|ref|ZP_08148590.1| D-alanyl-D-alanine carboxypeptidase DacB [Haemophilus
          parainfluenzae ATCC 33392]
 gi|325160191|gb|EGC72320.1| D-alanyl-D-alanine carboxypeptidase DacB [Haemophilus
          parainfluenzae ATCC 33392]
          Length = 479

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 6/65 (9%)

Query: 7  IIAMAMLSNIFPFLSIA------ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLM 60
           I +    +    +++A                 + N   +IA+        PAS  K+ 
Sbjct: 15 FITLGFSFSSMAEVNVASITQYLPEGASASIIAKNLNKDQIIADYNGSTFMLPASTQKVF 74

Query: 61 TAYVV 65
          TA   
Sbjct: 75 TAVAA 79


>gi|240949665|ref|ZP_04754000.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          minor NM305]
 gi|240295923|gb|EER46599.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          minor NM305]
          Length = 479

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 24 ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +     +   + +T  +I ++  D    PAS  K+ TA   
Sbjct: 37 PSGTSATFIAKNLDTNQIITQHQSDIFMLPASTQKVFTALAA 78


>gi|193212234|ref|YP_001998187.1| Beta-lactamase [Chlorobaculum parvum NCIB 8327]
 gi|193085711|gb|ACF10987.1| Beta-lactamase [Chlorobaculum parvum NCIB 8327]
          Length = 262

 Score = 36.9 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/238 (7%), Positives = 49/238 (20%), Gaps = 31/238 (13%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAETNKLP----YYTLLD-TNTGHVIAENY--PDHPWNPA 54
           + F++ +A+           +              ++   + G++   N    +  ++ A
Sbjct: 7   KLFILFLALLWSLPAVAEDKVLAGLFSQQRLNGTIVISSLHNGNIFIHNDLRANQRFSTA 66

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K+M   +       K       +          P  +  +   +    + +      
Sbjct: 67  STFKIMNTLIALEE---KAISEKDEVLKWDGHIYDFPDWNHDQTLESAFKVSCVWCFQEL 123

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           +    A               +     +    L          +      +    +  L 
Sbjct: 124 ARRVGAEK------------YRSYLRKTAYGELREPFDETTFWLDGSLQISAIEQVNFLK 171

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASA 232
                          +       +          T       KTG+       +    
Sbjct: 172 KVYL---------RTLPFSTHSYETLRQVMLVEQTPSYTMWAKTGWATRVNPQVGWYV 220


>gi|295822197|gb|ADG36752.1| extended-spectrum class A beta-lactamase [Rahnella sp. 348-Celery]
          Length = 218

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   ++++K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLTKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L    K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPRKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|158334994|ref|YP_001516166.1| D-alanyl-D-alanine carboxypeptidase [Acaryochloris marina
          MBIC11017]
 gi|158305235|gb|ABW26852.1| D-alanyl-D-alanine carboxypeptidase [Acaryochloris marina
          MBIC11017]
          Length = 488

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 42 IAENYPDHPWNPASLTKLMTAYVVF 66
          +        + PAS TK+MT     
Sbjct: 67 LYTKDAQRYFLPASTTKVMTTAAAL 91


>gi|194290819|ref|YP_002006726.1| division-specific transpeptidase, penicillin-binding protein 3
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224654|emb|CAQ70665.1| division-specific transpeptidase, penicillin-binding protein 3
           [Cupriavidus taiwanensis LMG 19424]
          Length = 599

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 42/168 (25%), Gaps = 25/168 (14%)

Query: 25  TNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTKLMTAY 63
             K     +LD  TG V+A        P+                  + P S+ K +T  
Sbjct: 266 KAKAASAVVLDAQTGEVLALANWPTYNPNDRTRLSGEQLRNRVLTDTFEPGSMMKPITVA 325

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
           +     +      +T I  +   +    + +       +T+   ++         IA+ +
Sbjct: 326 LALQLKR---VSPSTVIATTGKYNFEGATITDTHNYGALTVTGVIQKSSNIGTTKIAMMM 382

Query: 124 -AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
             + +                  G  A               T +   
Sbjct: 383 KPQEMWDMYTSIGLGQAPKIGFPGAVAGRVRPYKSWRPIEQATMSYGY 430


>gi|326440342|ref|ZP_08215076.1| putative penicillin-binding protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 482

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 7/130 (5%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYY--TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           I   + +  +   +IA  +    +   L D +    +       P  P S  KL+ A   
Sbjct: 166 ILSLVSTPSYDPSAIAGMDGADAWQALLADED--KPMVNRAIRQPLPPGSTFKLVVAAAA 223

Query: 66  FSFLKEKKAMLTT---PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
               +       T      +        P++         ++  A++         +AV 
Sbjct: 224 LEEGRYGSVDEPTDSPMPYVLPGTVRELPNDIASAPCENASIRTAMRWSCNNVFAKLAVD 283

Query: 123 IAESLCKTEK 132
           + +   +   
Sbjct: 284 LGQDTVRAMA 293


>gi|294811924|ref|ZP_06770567.1| Putative penicillin-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294324523|gb|EFG06166.1| Putative penicillin-binding protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 502

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 7/130 (5%)

Query: 8   IAMAMLSNIFPFLSIAETNKLPYY--TLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           I   + +  +   +IA  +    +   L D +    +       P  P S  KL+ A   
Sbjct: 186 ILSLVSTPSYDPSAIAGMDGADAWQALLADED--KPMVNRAIRQPLPPGSTFKLVVAAAA 243

Query: 66  FSFLKEKKAMLTT---PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
               +       T      +        P++         ++  A++         +AV 
Sbjct: 244 LEEGRYGSVDEPTDSPMPYVLPGTVRELPNDIASAPCENASIRTAMRWSCNNVFAKLAVD 303

Query: 123 IAESLCKTEK 132
           + +   +   
Sbjct: 304 LGQDTVRAMA 313


>gi|270269077|gb|ACZ66069.1| Beta-lactamase [Staphylococcus aureus]
          Length = 281

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKGLGDKVTNPVRYE 157


>gi|239813920|ref|YP_002942830.1| peptidoglycan glycosyltransferase [Variovorax paradoxus S110]
 gi|239800497|gb|ACS17564.1| Peptidoglycan glycosyltransferase [Variovorax paradoxus S110]
          Length = 582

 Score = 36.9 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 38/174 (21%), Gaps = 26/174 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIAENY-----PDHP----------------WNPASLTK 58
              A   K     +LD  TG V+A        PD                  + P S  K
Sbjct: 249 AVTARRAKAGSVVVLDAVTGEVLALANYPSYVPDKRQNLTGEQLRNRALTDTFEPGSTMK 308

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS--NSTFKKGSTMTLDNALKLLIVKSA 116
            +T  +        +   +T I  S    +      + T   G+        K   V + 
Sbjct: 309 PITVAMALEA---GRVKPSTLIETSPGRFQLGGFTISDTHNYGTLTVEGVIQKSSNVGAL 365

Query: 117 NDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
                     +  T            +  G                  T A   
Sbjct: 366 KIAQKMTPHEMWDTYTALGYGQKPQIQFPGAVTGRLRPWKTWKPVEQATMAYGY 419


>gi|159043145|ref|YP_001531939.1| division-specific transpeptidase [Dinoroseobacter shibae DFL 12]
 gi|157910905|gb|ABV92338.1| division-specific transpeptidase [Dinoroseobacter shibae DFL 12]
          Length = 647

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 20/98 (20%), Gaps = 4/98 (4%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +A+      + P S  K++TA                 +       +         K   
Sbjct: 314 LADKTVQGTYPPGSTFKMLTALAALEA---GVIDPGERVWC-PGHYKLGTRRFHCWKRGG 369

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               N +  L             +       +  +   
Sbjct: 370 HGWMNLVDSLRESCDVYYYDISQKVGVDKIAEMARRFG 407


>gi|302383613|ref|YP_003819436.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Brevundimonas subvibrioides ATCC 15264]
 gi|302194241|gb|ADL01813.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Brevundimonas subvibrioides ATCC 15264]
          Length = 506

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 39 GHVIAENYPDHPWNPASLTKLMTAYVVF 66
          G V+ +   D  ++PAS TK+ T    F
Sbjct: 67 GQVLVDIRADDRFSPASNTKIFTTAAAF 94


>gi|146340992|ref|YP_001206040.1| putative beta-lactamase [Bradyrhizobium sp. ORS278]
 gi|146193798|emb|CAL77815.1| putative Beta-lactamase [Bradyrhizobium sp. ORS278]
          Length = 285

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 76/254 (29%), Gaps = 13/254 (5%)

Query: 2   RQFLVIIAMAMLSNIFPFLSIAET----NKLPYY-----TLLDTNTGHVIAENYPDHPWN 52
           R+ +  +A+A L       +  +      +          LLDT +G  ++ +  D  + 
Sbjct: 3   RRQVFPLALAPLFVKPALAADFQETIAGIEADSAGRLGVALLDTASGA-LSGHRLDERFP 61

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISK-NASEYPPSNSTFKKGSTMTLDNALKLL 111
             S  K + A  + + +      L+  + I++ +   Y P        S +++    +  
Sbjct: 62  MCSTFKALLAAAILTKVDAGAEQLSRRLPITQGDILSYAPVTKLHVGTSGLSIGELCEAT 121

Query: 112 IVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
           +  S N  A  +  +L       +  +   +    L         +         T A  
Sbjct: 122 VTLSDNTAANLLLATLDGPAGLTRATRGFGDAITRLDRIEPALNESVPDDPRDTTTPAAM 181

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIV 229
              L+     +         + G  I  K       A        G KTG       N V
Sbjct: 182 AQTLAKLTTGNALSTSSRDVLNGWLIGCKTGAARLRAGLPASWRVGDKTGSGENGSSNDV 241

Query: 230 ASAIQGDQSLIAVI 243
           A      ++ + V 
Sbjct: 242 AVIWPAGRAPVIVT 255


>gi|24209729|gb|AAN41430.1| beta-lactamase [uncultured bacterium]
 gi|29568945|gb|AAO84013.1| blaOXA-1-like [Salmonella enterica subsp. enterica]
 gi|34014743|gb|AAQ56187.1| oxacillinase [Salmonella enterica subsp. enterica serovar Typhi]
          Length = 276

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/233 (10%), Positives = 60/233 (25%), Gaps = 16/233 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY--------YTLLDTNTGHVIAENYPDH---PWN 52
           F + + +A +       S   +             + L D +T   IA+           
Sbjct: 9   FAIFLIIANIIYSSASASTDISTVASQLFEGTEGCFLLYDASTNAEIAQFNKAKCAAQMA 68

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           P S  K+  + + F      +  +     I K    +  +++         +  + ++  
Sbjct: 69  PDSTFKIALSLMAFDAEIIDQKTIFKWDKIPKGMEIWNSNHTPKTWMQFSVVWVSQEITQ 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-----NAHGVVQHGHYTTA 167
               N I   + +     +        N         +            + +  ++   
Sbjct: 129 KIGLNKIKNYLKDFDYGNQDFSGDKERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLP 188

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
              + +   I   + Q +        +       N     G F G    K+G 
Sbjct: 189 VRNSAIENTIDNMYLQDLENSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGH 241


>gi|16078896|ref|NP_389717.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221309727|ref|ZP_03591574.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
          [Bacillus subtilis subsp. subtilis str. 168]
 gi|221314048|ref|ZP_03595853.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
          [Bacillus subtilis subsp. subtilis str. NCIB 3610]
 gi|221318970|ref|ZP_03600264.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
          [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221323244|ref|ZP_03604538.1| penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase)
          [Bacillus subtilis subsp. subtilis str. SMY]
 gi|730277|sp|P39844|DACC_BACSU RecName: Full=D-alanyl-D-alanine carboxypeptidase dacC;
          Short=DD-carboxypeptidase; Short=DD-peptidase; AltName:
          Full=Penicillin-binding protein 4a; Short=PBP-4a;
          Flags: Precursor
 gi|509467|emb|CAA84366.1| putative penicillin binding protein [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|2634218|emb|CAB13718.1| D-alanyl-D-alanine carboxypeptidase [Bacillus subtilis subsp.
          subtilis str. 168]
          Length = 491

 Score = 36.9 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 26/77 (33%), Gaps = 22/77 (28%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY-------TLLD---------------TNT 38
          ++ ++ ++ + +++++      A   +            L D                 T
Sbjct: 5  IKLYVAVLLLFVVASVPYMHQAALAAEKQDALSGQIDKILADHPALEGAMAGITVRSAET 64

Query: 39 GHVIAENYPDHPWNPAS 55
          G V+ E+  D    PAS
Sbjct: 65 GAVLYEHSGDTRMRPAS 81


>gi|291298908|ref|YP_003510186.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Stackebrandtia
          nassauensis DSM 44728]
 gi|290568128|gb|ADD41093.1| D-alanyl-D-alaninecarboxypeptidase/
          D-alanyl-D-alanine-endopeptidase [Stackebrandtia
          nassauensis DSM 44728]
          Length = 521

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 14/39 (35%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
             + +      I ++  +    PAS  K++T+      
Sbjct: 55 GVVVAEAEGNKTIYDHNGNMRAIPASNNKILTSAAAMDA 93


>gi|222153540|ref|YP_002562717.1| penicillin binding protein 2x [Streptococcus uberis 0140J]
 gi|222114353|emb|CAR43075.1| putative penicillin binding protein 2x [Streptococcus uberis 0140J]
          Length = 750

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/136 (9%), Positives = 35/136 (25%), Gaps = 26/136 (19%)

Query: 29  PYYTLLDTNTGHVIA-----ENYPDHP------------------WNPASLTKLMTAYVV 65
              TL++  TG ++A         D                    + P S  K+MT    
Sbjct: 290 SSATLINAKTGEILATSQRPSYNADTLEGLNNKNYNWKSALYQTNFEPGSTMKVMTLASA 349

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                +         + +   +    +   +     ++    +      S +        
Sbjct: 350 ID---DGVFKPNDVYSNANGITIADATIQDWSINEGVSTGQYMTYAQGFSYSSNVGMTKL 406

Query: 126 SLCKTEKKFVQHMNNT 141
                 +K++ +++  
Sbjct: 407 EQKMGNQKWLHYLSKF 422


>gi|160891415|ref|ZP_02072418.1| hypothetical protein BACUNI_03865 [Bacteroides uniformis ATCC 8492]
 gi|270295454|ref|ZP_06201655.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|156858822|gb|EDO52253.1| hypothetical protein BACUNI_03865 [Bacteroides uniformis ATCC 8492]
 gi|270274701|gb|EFA20562.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 712

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 21/130 (16%)

Query: 31  YTLLDTNTGHV-------------IAENYPDHP---WNPASLTKLMTAYVVFSFLKEKKA 74
             L++  TG V               E   +       P S  K  +  V      + K 
Sbjct: 270 AVLMEVATGEVKAIVNMMKAGDGNYYEMNSNAISDMLEPGSTFKTASIMVALE---DGKI 326

Query: 75  MLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              T +           S               +  ++L V S   ++  I +      +
Sbjct: 327 TPDTEVDTGNGIMNMYGSKMRDHNWHRGGYGKIDVTRILEVSSNVGVSYLIDKHYKDNPQ 386

Query: 133 KFVQHMNNTS 142
           KFV  +   S
Sbjct: 387 KFVDGLKRMS 396


>gi|308922611|gb|ADO51656.1| class A beta-lactamase RAHN-2 [Rahnella sp. 42-Carrot]
          Length = 295

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 67/230 (29%), Gaps = 9/230 (3%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   ++++++        +     + MT
Sbjct: 66  AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLTRSDLVNYNPITEKHLDTGMT 125

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 126 VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 185

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 186 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 245

Query: 222 CASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                N +A     ++  LI +         A  R      +A +++ G+
Sbjct: 246 DYGTTNDIAVIWPDNKAPLILITYFTQPQKDAKSRRDVLASAAKIVTPGY 295


>gi|295822157|gb|ADG36732.1| extended-spectrum class A beta-lactamase [Rahnella sp. 16-Salad]
 gi|295822165|gb|ADG36736.1| extended-spectrum class A beta-lactamase [Rahnella sp. 193-Celery]
 gi|295822167|gb|ADG36737.1| extended-spectrum class A beta-lactamase [Rahnella sp. 207-Apple]
 gi|295822185|gb|ADG36746.1| extended-spectrum class A beta-lactamase [Rahnella sp. 330-Salad]
          Length = 218

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   ++++K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLTKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L    K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPRKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|296330647|ref|ZP_06873125.1| beta-lactamase precursor [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674695|ref|YP_003866367.1| beta-lactamase precursor [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296152329|gb|EFG93200.1| beta-lactamase precursor [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412939|gb|ADM38058.1| beta-lactamase precursor [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 304

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 60/210 (28%), Gaps = 5/210 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT T   IA   P+  +  AS  K++ A  V      +   L   +  SK+        
Sbjct: 67  IDTGTNKTIAYR-PNERFAYASTYKVLAAAAVLKKNPIE--KLNEVMHYSKDDLVTYSPI 123

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +     + M+L    +  I  S N     + +     K  +K ++ + +         T 
Sbjct: 124 TEKHVDTGMSLKEISEAAIRYSDNTAGNILLQQLGGPKGFEKSLKQIGDHVTKANRFETD 183

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
             +A         T     + L      +         +               A     
Sbjct: 184 LNSAIPGDIRDTSTAKALASDLKAFTVDNTLTTDQRTILTDWMRGNATGDELIRAGAPTG 243

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              G K+G       N +A     +++ I 
Sbjct: 244 WEVGDKSGAGSYGTRNDIAIVWPPNRAPIV 273


>gi|257465496|ref|ZP_05629867.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          minor 202]
 gi|257451156|gb|EEV25199.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Actinobacillus
          minor 202]
          Length = 479

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 24 ETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVV 65
           +     +   + +T  +I ++  D    PAS  K+ TA   
Sbjct: 37 PSGTSATFIAKNLDTNQIITQHQSDIFMLPASTQKVFTALAA 78


>gi|282860279|ref|ZP_06269349.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella bivia JCVIHMP010]
 gi|282586953|gb|EFB92188.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Prevotella bivia JCVIHMP010]
          Length = 446

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 13/39 (33%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              + D     ++ ++       PAS  K +TA      
Sbjct: 101 GVMIWDLTDDTLLFQHNEQLHLRPASTMKCVTAIAALDK 139


>gi|206562254|ref|YP_002233017.1| putative beta-lactamase [Burkholderia cenocepacia J2315]
 gi|198038294|emb|CAR54249.1| putative beta-lactamase, class D [Burkholderia cenocepacia J2315]
          Length = 268

 Score = 36.9 bits (83), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 21/104 (20%), Gaps = 3/104 (2%)

Query: 32  TLLDTNTGHVIAEN-YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  TG V+ +         PAS  K+    + F     K     TP           
Sbjct: 28  VVADAATGKVLVQQGDCTTRVTPASTFKVAIGLMGFDAGVLK--DAHTPTLDFHAGYPDW 85

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKF 134
                 +                +               +   +
Sbjct: 86  GGAPWREPTDPARWMKLSIFWYSQQVTQALGQARFQQYTSAFGY 129


>gi|317478452|ref|ZP_07937612.1| penicillin binding transpeptidase domain-containing protein
           [Bacteroides sp. 4_1_36]
 gi|316905341|gb|EFV27135.1| penicillin binding transpeptidase domain-containing protein
           [Bacteroides sp. 4_1_36]
          Length = 712

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 34/130 (26%), Gaps = 21/130 (16%)

Query: 31  YTLLDTNTGHV-------------IAENYPDHP---WNPASLTKLMTAYVVFSFLKEKKA 74
             L++  TG V               E   +       P S  K  +  V      + K 
Sbjct: 270 AVLMEVATGEVKAIVNMMKAGDGNYYEMNSNAISDMLEPGSTFKTASIMVALE---DGKI 326

Query: 75  MLTTPITISKNASEYPPSNS--TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              T +           S               +  ++L V S   ++  I +      +
Sbjct: 327 TPDTEVDTGNGIMNMYGSKMRDHNWHRGGYGKIDVTRILEVSSNVGVSYLIDKHYKDNPQ 386

Query: 133 KFVQHMNNTS 142
           KFV  +   S
Sbjct: 387 KFVDGLKRMS 396


>gi|253564576|ref|ZP_04842033.1| D-alanyl-D-alanine carboxypeptidase [Bacteroides sp. 3_2_5]
 gi|251948352|gb|EES88634.1| D-alanyl-D-alanine carboxypeptidase [Bacteroides sp. 3_2_5]
 gi|301161103|emb|CBW20640.1| putative exported D-alanyl-D-alanine carboxypeptidase
          penicillin-binding protein [Bacteroides fragilis 638R]
          Length = 469

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 12/78 (15%)

Query: 1  MRQFLVIIAMAMLSNIFP-----FLSIAETNKLP-------YYTLLDTNTGHVIAENYPD 48
          M++  + I  +   +I       F +I    K           ++ D      +      
Sbjct: 1  MKKLNLFILFSFCFSIITWGQANFAAIDSLIKKELPQGSEVGISVYDLTARKTLYTYRDT 60

Query: 49 HPWNPASLTKLMTAYVVF 66
              PAS  KL+T     
Sbjct: 61 KLSRPASTMKLLTTITAL 78


>gi|15838215|ref|NP_298903.1| penicillin binding protein [Xylella fastidiosa 9a5c]
 gi|9106663|gb|AAF84423.1|AE003988_10 penicillin binding protein [Xylella fastidiosa 9a5c]
          Length = 494

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 35 DTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
          D   G V+          PAS  KL+T Y  F
Sbjct: 65 DGKIGDVLYARNTGSRTFPASNLKLVTLYSAF 96


>gi|265764763|ref|ZP_06093038.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 2_1_16]
 gi|263254147|gb|EEZ25581.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Bacteroides sp. 2_1_16]
          Length = 469

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 12/78 (15%)

Query: 1  MRQFLVIIAMAMLSNIFP-----FLSIAETNKLP-------YYTLLDTNTGHVIAENYPD 48
          M++  + I  +   +I       F +I    K           ++ D      +      
Sbjct: 1  MKKLNLFILFSFCFSIITWGQANFAAIDSLIKKELPQGSEVGISVYDLTARKTLYTYRDT 60

Query: 49 HPWNPASLTKLMTAYVVF 66
              PAS  KL+T     
Sbjct: 61 KLSRPASTMKLLTTITAL 78


>gi|60679621|ref|YP_209765.1| putative exported D-alanyl-D-alanine carboxypeptidase
          penicillin-binding protein [Bacteroides fragilis NCTC
          9343]
 gi|60491055|emb|CAH05803.1| putative exported D-alanyl-D-alanine carboxypeptidase
          penicillin-binding protein [Bacteroides fragilis NCTC
          9343]
          Length = 469

 Score = 36.9 bits (83), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 12/78 (15%)

Query: 1  MRQFLVIIAMAMLSNIFP-----FLSIAETNKLP-------YYTLLDTNTGHVIAENYPD 48
          M++  + I  +   +I       F +I    K           ++ D      +      
Sbjct: 1  MKKLNLFILFSFCFSIITWGQANFAAIDSLIKKELPQGSEVGISVYDLTARKTLYTYRDT 60

Query: 49 HPWNPASLTKLMTAYVVF 66
              PAS  KL+T     
Sbjct: 61 KLSRPASTMKLLTTITAL 78


>gi|328883738|emb|CCA56977.1| Beta-lactamase [Streptomyces venezuelae ATCC 10712]
          Length = 463

 Score = 36.9 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 46 YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            D  +   SLTK+ TA +V     E +  L  P
Sbjct: 60 DTDTQFRIGSLTKVFTAVLVMRLRDEGRLALDDP 93


>gi|300869388|ref|ZP_07113975.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300332615|emb|CBN59173.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 433

 Score = 36.9 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 14/226 (6%)

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
           P +PASL K+  A  +   + ++K  +   + ++        S    +      L   ++
Sbjct: 213 PRSPASLIKVPVAVALMHKVTKEKININEEVYVNPGNYTEDAS--EIRSRKRYPLKILVE 270

Query: 110 LLIVKSANDIAVAIAESLCKTE------KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
            +I  S+N     + + L           +  Q     SK +G     F    G     +
Sbjct: 271 EMIDHSSNIATNELMDYLGTDYINQVLENRGYQVTRVHSKLMGERTMPFNVGSG----PN 326

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
             T+ ++  +  +I                    +K               G KTG    
Sbjct: 327 RMTSNELTEMMVQIYNHEMPGNSVLIDALSRQYDRKLGFAALEGTQAKW-LGEKTGENSL 385

Query: 224 SGFNIVASAIQGDQSLIAVILGALDRNTRNKV-SASLLSMGFYNKT 268
                +A +I G+  +I VI     R+ + +     L      NK 
Sbjct: 386 VLGTTLAMSIDGEGYIITVIDNRSGRDLQIRQCITKLADYIVRNKQ 431


>gi|189189214|ref|XP_001930946.1| beta-lactamase family protein [Pyrenophora tritici-repentis
          Pt-1C-BFP]
 gi|187972552|gb|EDU40051.1| beta-lactamase family protein [Pyrenophora tritici-repentis
          Pt-1C-BFP]
          Length = 402

 Score = 36.9 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 48 DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
          +     AS TKLMTA      ++  +  L  P+ 
Sbjct: 53 NTVMWIASCTKLMTAICAMQLVERGQLRLDDPVY 86


>gi|301015192|gb|ADK47391.1| extended spectrum beta-lactamase [Capnocytophaga sputigena]
          Length = 293

 Score = 36.9 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 24/90 (26%), Gaps = 9/90 (10%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNK----LPYYTL----LDTNTGHVIAENYPDHPWN 52
          M+++     + +    F   ++              +    +++  G        +    
Sbjct: 1  MKKYFSFCLLGIFIFCFSQQNLKRDITKIIQGKNALVAVSVMNSK-GKTEVNINGNKKVP 59

Query: 53 PASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
            S+ K   A  V   +      L   I +
Sbjct: 60 MLSVFKFHIALAVLDLVDRGILDLEQNIFV 89


>gi|218263706|ref|ZP_03477733.1| hypothetical protein PRABACTJOHN_03423 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222563|gb|EEC95213.1| hypothetical protein PRABACTJOHN_03423 [Parabacteroides johnsonii
           DSM 18315]
          Length = 249

 Score = 36.9 bits (83), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 19/155 (12%)

Query: 1   MRQFLVIIA-MAMLSNIFPFLSIAETNKLP-----------YYTLLDTNTGHVIAENYPD 48
           MR+ L II  ++ +S  F   + A  N L               +++   G        +
Sbjct: 1   MRKLLFIIIYLSFISPAFAGGNKAIENALQEYIKGKDARIGIAIIIN---GKDTVSVNGN 57

Query: 49  HPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
             +   S+ K   A  V +++      L+  +T S  + +    +   KK         +
Sbjct: 58  RDFPMMSVVKFPLALTVANWVDTNNMSLSDTVTFSGKSLKEDTYSPMLKKYGKSRNAMTV 117

Query: 109 K----LLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
           +      +V+S N+ A  +   +        +   
Sbjct: 118 RELLEWSLVESDNNAADILLNCVGGVSGATSKMRQ 152


>gi|322835549|ref|YP_004215575.1| beta-lactamase [Rahnella sp. Y9602]
 gi|321170750|gb|ADW76448.1| Beta-lactamase [Rahnella sp. Y9602]
          Length = 295

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 9/230 (3%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   +++ K+        +     + MT
Sbjct: 66  AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLKKSDLVNYNPITEKHLDTGMT 125

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 126 VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 185

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 186 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 245

Query: 222 CASGFNIVASAIQGDQ-SLIAVIL------GALDRNTRNKVSASLLSMGF 264
                N +A     ++  LI +         A  R      +A +++ G+
Sbjct: 246 DYGTTNDIAVIWPDNKAPLILITYFTQPQKDAKSRRDVLASAAKIVTQGY 295


>gi|313207058|ref|YP_004046235.1| beta-lactamase [Riemerella anatipestifer DSM 15868]
 gi|312446374|gb|ADQ82729.1| beta-lactamase [Riemerella anatipestifer DSM 15868]
 gi|315022548|gb|EFT35575.1| penicillin-binding protein 4* [Riemerella anatipestifer RA-YM]
 gi|325335505|gb|ADZ11779.1| beta-lactamase [Riemerella anatipestifer RA-GD]
          Length = 415

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
             + P + AS++K MTA  +   ++ KK  L  
Sbjct: 102 NQNTPLHIASISKTMTAMAIMKLIEAKKIKLDQ 134


>gi|332305219|ref|YP_004433070.1| penicillin-binding protein transpeptidase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172548|gb|AEE21802.1| penicillin-binding protein transpeptidase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 585

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 25/143 (17%)

Query: 25  TNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTKLMTAY 63
                   ++D  TG ++A        P++                 + P S  K     
Sbjct: 257 KATSASAVVVDVQTGEILAMVNNPSYNPNNRSGVSGHRIRNRAITDAFEPGSSIK---PI 313

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-SNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            V S L+     + + I  S              +    + L   ++       + +A++
Sbjct: 314 AVLSALEFGSVEMDSVIDTSPGWMRVGGSMVRDSRNYGELDLTGIIRKSSNMGTSKLALS 373

Query: 123 IAESLCKTEKKFVQHMNNTSKNL 145
           + +     +   +  M++T  NL
Sbjct: 374 VPKQFLIDQYYNMGLMSDTGSNL 396


>gi|303251834|ref|ZP_07338005.1| penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307249135|ref|ZP_07531142.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302649264|gb|EFL79449.1| penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306854423|gb|EFM86619.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 675

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             +A   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 343 AVVANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 402

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 403 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 458

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 459 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 510


>gi|288871635|ref|ZP_06118326.2| cell division protein FtsI/penicillin-binding protein 2
           [Clostridium hathewayi DSM 13479]
 gi|288862704|gb|EFC95002.1| cell division protein FtsI/penicillin-binding protein 2
           [Clostridium hathewayi DSM 13479]
          Length = 482

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/183 (8%), Positives = 39/183 (21%), Gaps = 36/183 (19%)

Query: 30  YYTLLDTNTGHVIA-----ENYPDHP-------------------------WNPASLTKL 59
               ++ +TG ++A     +  P+                           + P S  K+
Sbjct: 169 AVVAMEPDTGKILAMVSKPDYNPNTLSTDWDALVAGDNGEGQLLNRAAQGLYPPGSTFKI 228

Query: 60  MTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDI 119
           +TA     +++E                 Y          +     +  +          
Sbjct: 229 VTA---LEYIRENPENFRDYRFDCSGFFHYEDYTIKCYHETAHGSQDFTRAFANSCNGAF 285

Query: 120 AVAIAESLCKTEKKFVQHMNNTSK---NLGLSATHFMNAHGVVQHGHYTTARDMAILSWR 176
           A           +   + +   +     +  S + +    G        T+         
Sbjct: 286 ANLALTLDLGRLRNTAEQLLFNTPLPVAIPYSQSAYALTPGGDTWQILQTSIGQGQTQMT 345

Query: 177 IKT 179
              
Sbjct: 346 PIH 348


>gi|172040891|ref|YP_001800605.1| penicillin-binding protein [Corynebacterium urealyticum DSM 7109]
 gi|171852195|emb|CAQ05171.1| penicillin-binding protein [Corynebacterium urealyticum DSM 7109]
          Length = 631

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 19/70 (27%), Gaps = 24/70 (34%)

Query: 25  TNKLPYYTLLDTNTGHVIA------------------------ENYPDHPWNPASLTKLM 60
             +     +LD  +  VIA                        +      + P S+ K+M
Sbjct: 283 KAESASAVVLDAKSAEVIAMATSDTIDPNGDLQKQLRGNKAFGDRNTAETFEPGSIAKIM 342

Query: 61  TAYVVFSFLK 70
           TA       K
Sbjct: 343 TAAAAIEEKK 352


>gi|53711316|ref|YP_097308.1| D-alanyl-D-alanine carboxypeptidase [Bacteroides fragilis YCH46]
 gi|52214181|dbj|BAD46774.1| D-alanyl-D-alanine carboxypeptidase [Bacteroides fragilis YCH46]
          Length = 468

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 12/78 (15%)

Query: 1  MRQFLVIIAMAMLSNIFP-----FLSIAETNKLP-------YYTLLDTNTGHVIAENYPD 48
          M++  + I  +   +I       F +I    K           ++ D      +      
Sbjct: 1  MKKLNLFILFSFCFSIITWGQANFAAIDSLIKKELPQGSEVGISVYDLTARKTLYTYRDT 60

Query: 49 HPWNPASLTKLMTAYVVF 66
              PAS  KL+T     
Sbjct: 61 KLSRPASTMKLLTTITAL 78


>gi|109899826|ref|YP_663081.1| peptidoglycan glycosyltransferase [Pseudoalteromonas atlantica T6c]
 gi|109702107|gb|ABG42027.1| peptidoglycan synthetase FtsI [Pseudoalteromonas atlantica T6c]
          Length = 586

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 25/143 (17%)

Query: 25  TNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTKLMTAY 63
                   ++D  TG ++A        P++                 + P S  K     
Sbjct: 258 KATSASAVVVDVQTGEILAMVNNPSYNPNNRSGVSGHRIRNRAITDAFEPGSSIK---PI 314

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPP-SNSTFKKGSTMTLDNALKLLIVKSANDIAVA 122
            V S L+     + + I  S              +    + L   ++       + +A++
Sbjct: 315 AVLSALEFGSVEMDSVIDTSPGWMRVGGSMVRDSRNYGELDLTGIIRKSSNMGTSKLALS 374

Query: 123 IAESLCKTEKKFVQHMNNTSKNL 145
           + +     +   +  M++T  NL
Sbjct: 375 VPKQFLIDQYYNMGLMSDTGSNL 397


>gi|325954294|ref|YP_004237954.1| beta-lactamase [Weeksella virosa DSM 16922]
 gi|323436912|gb|ADX67376.1| beta-lactamase [Weeksella virosa DSM 16922]
          Length = 419

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 32  TLLDTNTGHVIAENY----PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            L +   G    E       + P + AS++K+MT+  +   ++ KK  L   
Sbjct: 92  ILFEAYDGFADVEKNIPLTAETPIHIASVSKVMTSLAILKLVEHKKLTLDQT 143


>gi|260775436|ref|ZP_05884333.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
          BAA-450]
 gi|260608617|gb|EEX34782.1| D-alanyl-D-alanine carboxypeptidase [Vibrio coralliilyticus ATCC
          BAA-450]
          Length = 476

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 28 LPYYTLLDT--NTGHVIAENYPDHPWNPASLTKLMTAYVV 65
               L+++      ++  +  D  + PAS  KL+TA   
Sbjct: 32 SRAALLVESLDQQNSLLDTHNSDQYFPPASTLKLVTALAA 71


>gi|255535675|ref|YP_003096046.1| D-alanyl-D-alanine carboxypeptidase [Flavobacteriaceae bacterium
          3519-10]
 gi|255341871|gb|ACU07984.1| D-alanyl-D-alanine carboxypeptidase [Flavobacteriaceae bacterium
          3519-10]
          Length = 475

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 14/80 (17%)

Query: 1  MRQFLVIIAMA------------MLSNIFPFLSIAETNKLP-YYTLLDTNTGHVIAENYP 47
          M + +V+  MA            + +     L+            + D   G  + E   
Sbjct: 19 MNRLIVVALMASNVAFAQNVGQKLRTATQNLLASTPAYSANLSVYVAD-ENGEFVYEYNG 77

Query: 48 DHPWNPASLTKLMTAYVVFS 67
          +   + AS  K+ TA     
Sbjct: 78 NQGLSTASTQKIFTAAAALE 97


>gi|218777887|ref|YP_002429205.1| penicillin-binding protein transpeptidase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759271|gb|ACL01737.1| penicillin-binding protein transpeptidase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 438

 Score = 36.9 bits (83), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 35/151 (23%), Gaps = 21/151 (13%)

Query: 22  IAETNKLPYYTLLDTNTGHVI----AENYP-------DHPWNPASLTKLMTAYVVFSFLK 70
             E  +   +  ++  TG V+        P          +  AS+ K++TA        
Sbjct: 127 KPEYARAIAFVAMEPQTGKVLTMVGYHKDPKAGNPCTQVLFPAASVYKMVTAAAA----- 181

Query: 71  EKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT 130
                +       +    Y     T  K     +DN     I                  
Sbjct: 182 -----MDDKNFTPQTPVRYNGKKHTLYKSQLKDVDNKYTRHIDLEEAFSDSINPVFGKIG 236

Query: 131 EKKFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
                + +   SK +G      +        
Sbjct: 237 VLLGPEALTAKSKAMGFEQDLGVECDFNPSQ 267


>gi|309791993|ref|ZP_07686471.1| beta-lactamase [Oscillochloris trichoides DG6]
 gi|308225987|gb|EFO79737.1| beta-lactamase [Oscillochloris trichoides DG6]
          Length = 352

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 47 PDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
           +     ASLTKL TA  +   +      L 
Sbjct: 51 ANALVPVASLTKLATALAILRLVDLGVLDLD 81


>gi|269101909|ref|ZP_06154606.1| glutaminase [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161807|gb|EEZ40303.1| glutaminase [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 319

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          TG +I      +P+   S++K+MT  +    
Sbjct: 50 TGEIIDLYDAHYPFAIESISKIMTMGLALEQ 80


>gi|91217767|ref|ZP_01254723.1| Beta-lactamase class C family protein [Psychroflexus torquis ATCC
           700755]
 gi|91184105|gb|EAS70492.1| Beta-lactamase class C family protein [Psychroflexus torquis ATCC
           700755]
          Length = 362

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 21/100 (21%)

Query: 38  TGHVIAENYP---------------------DHPWNPASLTKLMTAYVVFSFLKEKKAML 76
           +G ++                          D  +N AS+TK  TA  +    +E K  L
Sbjct: 44  SGTILVAKNGNITQKRAYGLASKELDVKNKTDTKFNIASITKTFTAVAILQLHEEGKIDL 103

Query: 77  TTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
            TPI             ++      +T    L    V + 
Sbjct: 104 NTPIGNYLKDYPNEKVKNSVTISQLLTHTAGLPNFYVTNF 143


>gi|56459541|ref|YP_154822.1| cell division protein FtsI [Idiomarina loihiensis L2TR]
 gi|56178551|gb|AAV81273.1| Cell division protein FtsI [Idiomarina loihiensis L2TR]
          Length = 577

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 24/90 (26%), Gaps = 24/90 (26%)

Query: 25  TNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTKLMTAY 63
                   +LD  TG V+A        P++                 + P S  K     
Sbjct: 250 QATSGSAVVLDVETGEVLAMVNSPSYNPNNRTDLQSFRMRNRAITDSYEPGSTMK---PL 306

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           VV S L++ +      I  S          
Sbjct: 307 VVLSALEKGRHKAGDTIDTSPGWLRIGGRR 336


>gi|327404610|ref|YP_004345448.1| beta-lactamase [Fluviicola taffensis DSM 16823]
 gi|327320118|gb|AEA44610.1| beta-lactamase [Fluviicola taffensis DSM 16823]
          Length = 441

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 45  NYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
              D  +   S+TK+ TA ++F  +++ K  L   
Sbjct: 69  RDQDTKYQVGSITKIYTAVLIFQLVEKGKLSLDDK 103


>gi|312886467|ref|ZP_07746076.1| Beta-lactamase [Mucilaginibacter paludis DSM 18603]
 gi|311301095|gb|EFQ78155.1| Beta-lactamase [Mucilaginibacter paludis DSM 18603]
          Length = 264

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/244 (9%), Positives = 64/244 (26%), Gaps = 25/244 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPYYTLLDTNTGHVIAENYPDHPWN--PA 54
           M + L+  A+    ++    S+ +  K        T+ +  T   +  +  D      PA
Sbjct: 1   MHRCLLFCALFFPLSLKAQASLQQPFKECRINGSTTIYNYKTKKWLLSDSADAQVATLPA 60

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S  K++   +               I     +++        +    +T+  A ++    
Sbjct: 61  STFKVINILIALE---TGTIKDENEIIKWPGSTDTTLYGYRPEIYHDITVKEAFRVSAGW 117

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILS 174
           +  ++A  I     +                G        A          + ++     
Sbjct: 118 AFIEMAKKIDRKKYQYYLDACD--------YGNHNLAEKGADFWNFGVFAISPKNQVEFL 169

Query: 175 WRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQ 234
            ++  +        ++   +       N              KTG+T  +  ++      
Sbjct: 170 IKVYEE--------KLPFSKRNIAILKNVMVTDTAPDYVIRSKTGWTKTNNEDLGWWVGY 221

Query: 235 GDQS 238
             + 
Sbjct: 222 VQRK 225


>gi|195977167|ref|YP_002122411.1| beta-lactamase [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|225869499|ref|YP_002745446.1| exported protein [Streptococcus equi subsp. equi 4047]
 gi|195973872|gb|ACG61398.1| beta-lactamase [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|225698903|emb|CAW91893.1| putative exported protein [Streptococcus equi subsp. equi 4047]
          Length = 428

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 44/204 (21%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAM-------LTTPITISKNASEYPPSNSTFKK 98
             D     AS++KL T Y V   LK            +        +         +   
Sbjct: 222 NADKQMYAASISKLATLYSVQKKLKSGSLSEGKSLKYIDEVNHFYGDYDPTGSGKISKTA 281

Query: 99  G-STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +   LK +  +S N     +   LC    +  Q        +            
Sbjct: 282 DKKDYNVMELLKAVAQQSDNVATNILGYYLCNQYNQAFQSEIRALAGVDWDM-----EKR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     +   +  +       +       +     + 
Sbjct: 337 LLSSHAAANLMEAIYYQKGQIISYLSQTAFDDQRISKNISVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G            A   D + IA
Sbjct: 397 YGDNPFILSVFTDKASYDDITAIA 420


>gi|167623981|ref|YP_001674275.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella halifaxensis HAW-EB4]
 gi|167354003|gb|ABZ76616.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Shewanella halifaxensis HAW-EB4]
          Length = 476

 Score = 36.9 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 14/79 (17%)

Query: 1  MRQFLVIIAMAMLSNIFPF-------LSIAETNKLPYYTLLDT----NTGHV---IAENY 46
          +++F+    + +++            +   E        ++      + GHV        
Sbjct: 2  LKRFVAATTLCLIATSAVADDYLANMVKAIEPKTSQTAIVVSPLNLNDEGHVSSPAYRKD 61

Query: 47 PDHPWNPASLTKLMTAYVV 65
              + PAS  KL+TA   
Sbjct: 62 AQRLFVPASTMKLLTAVAA 80


>gi|330820061|ref|YP_004348923.1| Beta-lactamase [Burkholderia gladioli BSR3]
 gi|327372056|gb|AEA63411.1| Beta-lactamase [Burkholderia gladioli BSR3]
          Length = 268

 Score = 36.9 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 53/222 (23%), Gaps = 28/222 (12%)

Query: 32  TLLDTNTGHVIAENYP--DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            + D  +G +++E          PAS  K+       S +     +L    T        
Sbjct: 18  VVADAASGSILSERGEGCATRVTPASTFKI-----ALSLMGYDAGVLKDEHT-------- 64

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
                 F+ G      +  +     +          S   TE          ++ LG   
Sbjct: 65  --PLLPFRAGYPAWGGDVWRQPTDPARWIRYSVFWYSQRITEALGQARFARYTRELGFGN 122

Query: 150 THFMNAHGVVQ-HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                  G          A  + I      T     +++               T     
Sbjct: 123 ADVHAGPGEFSGMKGAWNAGTLRISPREQITFLRGIVNHRLPVSAHAIEMTGRITQLDEQ 182

Query: 209 TFLGADGMKTGFTCASGFN----------IVASAIQGDQSLI 240
                   KTG +                 V  A +GD+S++
Sbjct: 183 RDGWTVHGKTGTSSPGEDGKFDRAHAYGWFVGWATRGDRSVV 224


>gi|188587636|ref|YP_001919710.1| N-acetylmuramoyl-L-alanine amidase CwlD [Clostridium botulinum E3
          str. Alaska E43]
 gi|251778316|ref|ZP_04821236.1| N-acetylmuramoyl-L-alanine amidase CwlD [Clostridium botulinum E1
          str. 'BoNT E Beluga']
 gi|188497917|gb|ACD51053.1| N-acetylmuramoyl-L-alanine amidase CwlD [Clostridium botulinum E3
          str. Alaska E43]
 gi|243082631|gb|EES48521.1| N-acetylmuramoyl-L-alanine amidase CwlD [Clostridium botulinum E1
          str. 'BoNT E Beluga']
          Length = 220

 Score = 36.9 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHV 41
          M++ L I  +  L    P   +AE NK  +  ++D   G +
Sbjct: 3  MKRVLSIFCIIFLILGIPTSVLAEENKSKHVIVIDPGHGGI 43


>gi|6685153|gb|AAF23817.1|AF217649_1 beta-lactamase [Vibrio harveyi]
          Length = 283

 Score = 36.9 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 65/212 (30%), Gaps = 3/212 (1%)

Query: 33  LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS 92
           + DT T     +   D  +   S  K +    + S +  +K        + +        
Sbjct: 41  VWDTQTDE-HWDYRGDERFPMMSTFKTLACATMLSDMDNEKLDKNATAKVEERNMVVWSP 99

Query: 93  NSTFKKGSTMTLDNALKLLIVKSANDIAVAI--AESLCKTEKKFVQHMNNTSKNLGLSAT 150
                   T  +++A +  ++ S N  A  +  +    +    F++ + + +  L     
Sbjct: 100 VMDRMASQTTRIEHACEAAMLMSDNTAANIVLRSIGGPRGVTTFLRSIGDKATRLDRFEP 159

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
               A+   +    T    +  L   ++ D   Y    Q+K      K   +   +V   
Sbjct: 160 RLNEANPGDKRDTTTPNAMVNTLHTLLEGDALSYESRIQLKIWMQDNKVSDSLMRSVLPK 219

Query: 211 LGADGMKTGFTCASGFNIVASAIQGDQSLIAV 242
             +   ++G        I A   + +   + +
Sbjct: 220 GWSIADRSGAGGFGSRGITAMIWKENHKPVYI 251


>gi|238898851|ref|YP_002924533.1| division-specific transpeptidase, penicillin-binding protein 3
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466611|gb|ACQ68385.1| division-specific transpeptidase, penicillin-binding protein 3
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 583

 Score = 36.5 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 36/137 (26%), Gaps = 24/137 (17%)

Query: 19  FLSIAETNKLPYYTLLDTNTGHVIA-----ENYPD----------------HPWNPASLT 57
              IA   +     LLD NTG V+A        P+                  + P S  
Sbjct: 246 QAVIAHKAESGTAVLLDVNTGEVLAMANSPSYNPNNLMNTPQKAMRNRAITDIFEPGSTV 305

Query: 58  KLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAN 117
           K M   VV + L+       + +  +         +           +   K   V  + 
Sbjct: 306 KPM---VVMAALQHGVIEKDSVLNTTPYYINGHKIHDISFYPKLSITEILQKSSNVGVSK 362

Query: 118 DIAVAIAESLCKTEKKF 134
                    + +   KF
Sbjct: 363 LALAMPPLWVAEIYSKF 379


>gi|82548137|gb|ABB82608.1| beta-lactamase [Staphylococcus aureus]
          Length = 281

 Score = 36.5 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE----TNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +     S         +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSXSSHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHIXKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MAYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|262197090|ref|YP_003268299.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Haliangium ochraceum
           DSM 14365]
 gi|262080437|gb|ACY16406.1| peptidase S13 D-Ala-D-Ala carboxypeptidase C [Haliangium ochraceum
           DSM 14365]
          Length = 627

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 16/44 (36%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
              ++D  TG  +     D   NPAS  KL++       L    
Sbjct: 101 AIYIVDAKTGAPLFAAQEDELLNPASNVKLISTATALDALGPNW 144


>gi|150026218|ref|YP_001297044.1| penicillin-binding protein [Flavobacterium psychrophilum
          JIP02/86]
 gi|149772759|emb|CAL44243.1| Probable penicillin-binding protein [Flavobacterium psychrophilum
          JIP02/86]
          Length = 495

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 21/98 (21%)

Query: 2  RQFLVIIAMAMLSNIFP-------FLSIAETNKLPYYTLLDTNTGHVIAEN--------- 45
          ++F VI+    L+NI         F ++++ N      ++ + +G  +  N         
Sbjct: 3  KRFFVILLTTFLANILSGQELNDFFSTLSKNNIFKGSVVI-SKSGKKVFSNSYGFSNIEK 61

Query: 46 ----YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                   +  AS+TK  TA  +    ++ K  +  P
Sbjct: 62 KEKINDKSQFPIASITKTFTATAILQLQQKGKLNINEP 99


>gi|307249211|ref|ZP_07531208.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307260463|ref|ZP_07542158.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307262592|ref|ZP_07544223.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306858735|gb|EFM90794.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869866|gb|EFN01648.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306872090|gb|EFN03803.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 675

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 343 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 402

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 403 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 458

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 459 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 510


>gi|307244813|ref|ZP_07526912.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253767|ref|ZP_07535621.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307256033|ref|ZP_07537821.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307258224|ref|ZP_07539967.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854258|gb|EFM86464.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863251|gb|EFM95191.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865455|gb|EFM97350.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306867684|gb|EFM99529.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 675

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 343 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 402

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 403 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 458

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 459 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 510


>gi|303250491|ref|ZP_07336688.1| peptidoglycan synthetase FtsI [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251533|ref|ZP_07533440.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650479|gb|EFL80638.1| peptidoglycan synthetase FtsI [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860997|gb|EFM93003.1| Penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 675

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 343 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 402

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 403 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 458

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 459 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 510


>gi|282862164|ref|ZP_06271227.1| Peptidoglycan glycosyltransferase [Streptomyces sp. ACTE]
 gi|282563189|gb|EFB68728.1| Peptidoglycan glycosyltransferase [Streptomyces sp. ACTE]
          Length = 666

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 47/163 (28%), Gaps = 26/163 (15%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAENYP---------------------DHPWNPA 54
                         Y  + +T TG V+A                            + P 
Sbjct: 312 AIADQVEESKADRGYVIVQNTKTGEVLAMANAPGYDPNDLSQVDGAALGNAALQDVYEPG 371

Query: 55  SLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVK 114
           S +K+M+   V        A   T + +                    T    L  ++ K
Sbjct: 372 STSKIMSMAAVLEE---GAATPATHVVVPNRLH--RGDRLFRDDIDHPTWYLTLNGVLAK 426

Query: 115 SANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
           S+N   +     L KT+ +  + + +  +  GL +T  ++  G
Sbjct: 427 SSNIGTILATGQLGKTQAEANKVLYSYLRKFGLGSTTGLDYPG 469


>gi|300777087|ref|ZP_07086945.1| beta-lactamase [Chryseobacterium gleum ATCC 35910]
 gi|18001151|gb|AAL55262.1|AF339733_1 extended-spectrum class A beta-lactamase [Chryseobacterium gleum]
 gi|300502597|gb|EFK33737.1| beta-lactamase [Chryseobacterium gleum ATCC 35910]
          Length = 292

 Score = 36.5 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 9/89 (10%)

Query: 1  MRQ----FLVIIAMAMLSNIFPFLSIAETNKLPYYTL----LDTNTGHVIAENYPDHPWN 52
          M++    FL+I A ++         I    K    T+    L    G    +   D    
Sbjct: 1  MKKTTLLFLLISAFSLAQTSLLEQKINSIIKNKKATVGVSVLGFENG-FKYDKNGDKKLP 59

Query: 53 PASLTKLMTAYVVFSFLKEKKAMLTTPIT 81
            S+ K   A  V + + + K  L   I 
Sbjct: 60 MQSVFKFHIAAAVLNAVDQGKLSLDQKIM 88


>gi|332522951|ref|ZP_08399203.1| hypothetical protein STRPO_1973 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314215|gb|EGJ27200.1| hypothetical protein STRPO_1973 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 348

 Score = 36.5 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 46/177 (25%), Gaps = 7/177 (3%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G          P    S  KL    +V    ++ K  L     I+    EY   + 
Sbjct: 113 DLESGKT-FSMNDRQPMTAGSTYKLPLNMLVVDETEKGKYSLEQRFDITNTTYEYDREHM 171

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
            +       +  +         ++   A A +           M+   K  G        
Sbjct: 172 AYVNQFAGAMSISEMQEYSLMYSENTPAYALADRLGG------MDKAYKKFGRYGKSKSE 225

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              +++ G+ TT      +   +     +Y       G    G  Y      +  + 
Sbjct: 226 IKTILEEGNKTTTEYYIQVLDYLWRHKNKYKDILYYIGESFPGDYYKTYLPDIPIYQ 282


>gi|310815355|ref|YP_003963319.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Ketogulonicigenium vulgare Y25]
 gi|308754090|gb|ADO42019.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Ketogulonicigenium vulgare Y25]
          Length = 489

 Score = 36.5 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 14/38 (36%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           Y     + G VI  N P     PAS  K +TA     
Sbjct: 57 SYLAARLSDGQVIEGNNPGMALAPASTAKAVTALYALD 94


>gi|304317847|ref|YP_003852992.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302779349|gb|ADL69908.1| beta-lactamase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 259

 Score = 36.5 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 15/223 (6%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY-PPSN 93
           +  TG  I +   +  +  AS  K++    ++   KE    LT  I +S           
Sbjct: 24  NLKTGERI-DINEEMMFPSASTIKIVIMAQIYKMAKEGYIRLTDNIILSDFMKTNGSGIL 82

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                    T++  + L+I+ S N  A  +       +   ++++N  +++LG+  T   
Sbjct: 83  YQLNSKHKFTIEELITLMIIISDNTAANVLI------DIADMKNINKMAEDLGMLHTKIQ 136

Query: 154 NAHGVVQ-----HGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
                 +       +YT  +DM  L   +  D       +    L+I  K+       + 
Sbjct: 137 RKMMDFEAAKSGKDNYTCPKDMTHL-LELIHDGKVVDEEYSNMMLDILKKQQDLGRLDLY 195

Query: 209 TFLGA-DGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRN 250
                    K G       ++    ++  Q +I+V+   L  N
Sbjct: 196 LPEDVLIAHKPGELKLLEHDVGIVFLENCQYIISVMTNNLSTN 238


>gi|190149281|ref|YP_001967806.1| peptidoglycan synthetase FtsI [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914412|gb|ACE60664.1| peptidoglycan synthetase FtsI [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 686

 Score = 36.5 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 354 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 413

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 414 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 469

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 470 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 521


>gi|225563362|gb|EEH11641.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 582

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 24/86 (27%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +  AS++K+MT Y        K         + +   E                 
Sbjct: 105 NGDTMYRIASISKVMTLYTFLIEAGFKYFNEPVAKFVPEIEREIQRQWGNIDDTLVPQWR 164

Query: 106 NALKLLIVKSANDIAVAIAESLCKTE 131
                 +    ND+A  + +++    
Sbjct: 165 EITVGSLANYYNDMAGRVNQTVTTQF 190


>gi|165975470|ref|YP_001651063.1| penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875571|gb|ABY68619.1| penicillin-binding protein 3 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 686

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 354 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 413

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 414 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 469

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 470 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 521


>gi|59711081|ref|YP_203857.1| D-alanyl-D-alanine carboxypeptidase/endopeptidase [Vibrio
          fischeri ES114]
 gi|59479182|gb|AAW84969.1| D-alanyl-D-alanine carboxypeptidase [Vibrio fischeri ES114]
          Length = 468

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKL 59
          L +I+ + +++I   LS   +      T+ +  +  +  +   D    PAS  K+
Sbjct: 11 LSLISFSSIADIKETLSSLPSGSRTAITVENLQSNKIEFQQKQDELLPPASTLKI 65


>gi|53729125|ref|ZP_00134089.2| COG0768: Cell division protein FtsI/penicillin-binding protein 2
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126207500|ref|YP_001052725.1| peptidoglycan synthetase FtsI [Actinobacillus pleuropneumoniae L20]
 gi|126096292|gb|ABN73120.1| peptidoglycan synthetase FtsI [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 686

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 354 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 413

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 414 PLVVLTALQNG----ATYRDEVINTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 469

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 470 LALRMPSTALVDTYSKVGFGKDTGLGLGEQKGTNGDRKRWSDIERATMAYGY 521


>gi|332885962|gb|EGK06206.1| hypothetical protein HMPREF9456_00080 [Dysgonomonas mossii DSM
           22836]
          Length = 733

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 53/210 (25%), Gaps = 37/210 (17%)

Query: 25  TNKLPY--YTLLDTNTGH-------------VIAENYPDHPWN---PASLTKLMTAYVVF 66
                     +++  TG              V AE  P+       P S  K ++  +  
Sbjct: 284 ETNAESGCAIVMEVATGEIKAITNLDRLSPGVYAEGNPNAFSYMSEPGSTFKTVSLMIAL 343

Query: 67  SFLKEKKAMLTTPITISKNASEYPPS---NSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
               +        I +     EY      +  ++KG         + +       IA  I
Sbjct: 344 E---DGVVTPDEEIFVGNGLFEYKGRIVKDHDWRKGQDKGYVTVARGMYSSLNVAIAKMI 400

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
            +      +K+V        +LGL+     +   +      +  R           D   
Sbjct: 401 LKGYENNPQKYV----QRIHDLGLTKKIEWDVP-LQGKEGTSVIR--------FPDDKSN 447

Query: 184 YMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
                 +  +    +      + +  + G 
Sbjct: 448 PWSKTTLPWMSFGYETQVPPIYMLMFYNGI 477


>gi|163736833|ref|ZP_02144251.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Phaeobacter gallaeciensis BS107]
 gi|161389437|gb|EDQ13788.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Phaeobacter gallaeciensis BS107]
          Length = 494

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          + D  TG  +          PAS+ K +TA      
Sbjct: 63 VADVKTGLRLEAEGAGAGLPPASVAKALTALYALDA 98


>gi|163743661|ref|ZP_02151036.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Phaeobacter gallaeciensis 2.10]
 gi|161383028|gb|EDQ07422.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Phaeobacter gallaeciensis 2.10]
          Length = 494

 Score = 36.5 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 13/36 (36%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          + D  TG  +          PAS+ K +TA      
Sbjct: 63 VADVKTGLRLEAEGAGAGLPPASVAKALTALYALDA 98


>gi|300786998|ref|YP_003767289.1| beta-lactamase-like protein [Amycolatopsis mediterranei U32]
 gi|299796512|gb|ADJ46887.1| beta-lactamase-like protein [Amycolatopsis mediterranei U32]
          Length = 299

 Score = 36.5 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
           + + D  +G  +    PD  +  ASL K+  A V    ++  +  +   + +       
Sbjct: 21 SFLVRDLRSGAEL-GIDPDREYPIASLVKVPLAAVTLDRVRRGELDVAAQLEVPPGGVTT 79

Query: 90 PPS 92
          P  
Sbjct: 80 PGP 82


>gi|157151309|ref|YP_001451361.1| hypothetical protein SGO_2136 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076103|gb|ABV10786.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 426

 Score = 36.5 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 1/85 (1%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            NTG   A    D     AS+TKL   Y     L + K  L   +   ++ ++Y  +  T
Sbjct: 211 LNTGKT-AGINQDTEMYSASVTKLPILYYAQEELNQGKITLAQGLKYIQDVNDYSGAYDT 269

Query: 96  FKKGSTMTLDNALKLLIVKSANDIA 120
              GS     +  +  +    N IA
Sbjct: 270 EGSGSLPKEADNKEYSVQDLINHIA 294


>gi|254413032|ref|ZP_05026804.1| D-Ala-D-Ala carboxypeptidase 3 (S13) family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180196|gb|EDX75188.1| D-Ala-D-Ala carboxypeptidase 3 (S13) family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 439

 Score = 36.5 bits (82), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 41  VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
           V+AE+    P   ASLTK+ T  V  S  K   
Sbjct: 88  VLAEHQGKIPRPAASLTKIATTLVTLSQWKPDH 120


>gi|307326692|ref|ZP_07605885.1| penicillin-binding protein transpeptidase [Streptomyces
           violaceusniger Tu 4113]
 gi|306887676|gb|EFN18669.1| penicillin-binding protein transpeptidase [Streptomyces
           violaceusniger Tu 4113]
          Length = 533

 Score = 36.5 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 24/99 (24%), Gaps = 12/99 (12%)

Query: 27  KLPYYTLLDTNTGHVIAENYPDH---------PWNPASLTKLMTAYVVFSFLKEKKAMLT 77
                  L  +TG ++A    D             P S  K++TA  +       K    
Sbjct: 254 DGASVVALKPSTGEILAVANSDQAEFNAALQGQTAPGSTFKIVTAATLLEA---GKVSPG 310

Query: 78  TPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSA 116
             +   K A+          + S        +       
Sbjct: 311 HLVPCPKTAAYAQGMTFHNVEDSENPGATFAQDFAASCN 349


>gi|295822145|gb|ADG36726.1| extended-spectrum class A beta-lactamase [Rahnella sp. 120-Carrot]
          Length = 218

 Score = 36.5 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   +++ K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLKKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARKLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|28883590|gb|AAO49767.1| beta-lactamase K1 [Klebsiella oxytoca]
          Length = 223

 Score = 36.5 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 2/91 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +   ++     D  +   S +K+M A  V    +  K ++   + I+          + 
Sbjct: 55  ADNSQILY--RGDERFAMCSTSKVMAAAAVLKQSESNKEVVNKRLEINAADLVVWSPITE 112

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
               S MTL       +  S N     I   
Sbjct: 113 KHLQSGMTLAELSAATLQYSDNTAMNLIIGY 143


>gi|300312666|ref|YP_003776758.1| D-alanyl-D-alanine carboxipeptidase 3 (S13) family signal peptide
          protein [Herbaspirillum seropedicae SmR1]
 gi|300075451|gb|ADJ64850.1| D-alanyl-D-alanine carboxipeptidase 3 (S13) family signal peptide
          protein [Herbaspirillum seropedicae SmR1]
          Length = 484

 Score = 36.5 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 14 SNIFPFLSIAETNKLPYYTLLDTN-TGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
          + +          +     ++DT  +  V+  N    P+NPAS+ KL+T       
Sbjct: 41 AVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIGQPFNPASVMKLVTTDAALEM 96


>gi|207722663|ref|YP_002253099.1| oxacillin hydrolase (class-d beta-lactamase) protein [Ralstonia
           solanacearum MolK2]
 gi|206587845|emb|CAQ18427.1| oxacillin hydrolase (class-d beta-lactamase) protein [Ralstonia
           solanacearum MolK2]
          Length = 272

 Score = 36.5 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 26/245 (10%), Positives = 53/245 (21%), Gaps = 21/245 (8%)

Query: 32  TLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  +G  +  E        PAS  K+  A + +     K            +     
Sbjct: 28  IVADAASGKPIRYEGQCGERVTPASTFKIALAVMGYDAGFLKDEYAPVLSFRQGDPDWGG 87

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
                    S+    + +      +    A A    + +     +    +  +N GL  +
Sbjct: 88  ADWHRPTDPSSWIQYSVVWYSQRITHALGADAFQSYVRRFGYGNMDVSGDAGRNNGLDRS 147

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNW----- 205
             +++  +         R +      +                   G             
Sbjct: 148 WIISSLKISPEEQVGFLRRLVNRQLPVSAHALDMTARITEAARLPGGWVVHGKMGTGAPG 207

Query: 206 ---------AVGTFLGADGMKTGFTCASGFNIVAS-----AIQGDQSLIAVILGA-LDRN 250
                        +    G  T  T    F  +       A    +     +LGA     
Sbjct: 208 TSSPDGTWDQAHAYGWFVGWATNGTKTYVFAHLLQDERIEARSAGRRARDAVLGALPAIL 267

Query: 251 TRNKV 255
            R   
Sbjct: 268 ARADD 272


>gi|229018755|ref|ZP_04175604.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
 gi|229024997|ref|ZP_04181426.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228736332|gb|EEL86898.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1272]
 gi|228742505|gb|EEL92656.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1273]
          Length = 346

 Score = 36.5 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 45/172 (26%), Gaps = 4/172 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    PD     AS  KL+ A      + E K   ++   +S N    
Sbjct: 28  SALLV-KRNDKVVYSVNPDVVLPVASTMKLIVALEYTKQVTEGKIDPSS--FVSINDVNR 84

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
               ST             K   +         +A+ + K               L    
Sbjct: 85  YYVPSTDGGAQDRWQSYLQKKEKITEGAVSLEEVAKGMVKFSSNANTEYLMEVLGLDNIN 144

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            +   +  +  H           +   +  +     +  + K  E+  ++Y 
Sbjct: 145 RNL-QSLALPAHQPLFPIVSSLYIPGYLHKELHVPKYKIEKKLKEMSQEQYR 195


>gi|307701222|ref|ZP_07638244.1| putative D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mobiluncus mulieris FB024-16]
 gi|307613616|gb|EFN92863.1| putative D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mobiluncus mulieris FB024-16]
          Length = 505

 Score = 36.5 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVF 66
           +A   PD    PAS TKL TA    
Sbjct: 104 LASANPDLALAPASTTKLFTAAATL 128


>gi|306819558|ref|ZP_07453264.1| serine-type D-Ala-D-Ala carboxypeptidase [Mobiluncus mulieris ATCC
           35239]
 gi|304647655|gb|EFM44974.1| serine-type D-Ala-D-Ala carboxypeptidase [Mobiluncus mulieris ATCC
           35239]
          Length = 505

 Score = 36.5 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVF 66
           +A   PD    PAS TKL TA    
Sbjct: 104 LASANPDLALAPASTTKLFTAAATL 128


>gi|227876281|ref|ZP_03994397.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mobiluncus mulieris ATCC 35243]
 gi|269977964|ref|ZP_06184917.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mobiluncus mulieris 28-1]
 gi|227843242|gb|EEJ53435.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mobiluncus mulieris ATCC 35243]
 gi|269933811|gb|EEZ90392.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Mobiluncus mulieris 28-1]
          Length = 505

 Score = 36.5 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVF 66
           +A   PD    PAS TKL TA    
Sbjct: 104 LASANPDLALAPASTTKLFTAAATL 128


>gi|4493255|emb|CAA37699.1| beta-lactamase [Actinomadura sp. R39]
          Length = 304

 Score = 36.5 bits (82), Expect = 5.9,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 69/215 (32%), Gaps = 8/215 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT TG  +     D  +  AS  K  TA +V    +     L   +T ++         
Sbjct: 66  VDTGTGEEVFHR-ADERFGYASTHKAFTAALVL--GQNTPEELEEVVTYTEEDLVDYSPI 122

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
           +     + MTL       +  S N  A  + E L    + F + M     ++  +     
Sbjct: 123 TEQHVDTGMTLLEVADAAVRHSDNTAANLLFEEL-GGPEGFEEDMRELGDDVISADRIET 181

Query: 154 NAHGVV--QHGHYTTARDMA-ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
             + V   +    +T R MA  L   +  D  +      +  + +          A    
Sbjct: 182 ELNEVPPGETRDTSTPRAMAGSLEAFVLGDVLEEGPRDVLTEMLLNNTTGDELIRAGVPE 241

Query: 211 LGADGMKT-GFTCASGFNIVASAIQGDQSLIAVIL 244
               G KT G +  S  +I       D  ++  ++
Sbjct: 242 DWRVGDKTGGGSHGSRNDIAVVWPPEDDPIVIAVM 276


>gi|229029481|ref|ZP_04185563.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228731834|gb|EEL82734.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 363

 Score = 36.5 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 20/65 (30%)

Query: 37  NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF 96
             G V+     D     AS+ K++ A      + E K      I++ +    Y  +    
Sbjct: 56  KNGEVLTSINEDVKLPLASMAKIVIAVEFAKQVSEGKISRDEQISLQELEKYYVKNTDGG 115

Query: 97  KKGST 101
                
Sbjct: 116 MHPDW 120


>gi|229174210|ref|ZP_04301744.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
 gi|228609228|gb|EEK66516.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus MM3]
          Length = 359

 Score = 36.5 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 56/212 (26%), Gaps = 15/212 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      ++    P+ 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLV-KRNDKIVYSVNPNV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS  KL+ A      + E K   ++   +S N        +T             K
Sbjct: 60  VLPVASTMKLIVALEYTKQVTEGKIDPSS--FVSINDINRYYVPNTDGGAQDRWQRYLQK 117

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
              +         +A+ + K               L     +   +  +  H        
Sbjct: 118 TDKITEGAVSLEEVAKGMVKFSSNANAEYLMEVLGLDNINRNL-QSLSLPAHQPLFPIVS 176

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
              +   +  +     +  + K  E+  ++Y 
Sbjct: 177 SLYIPGYLHKELHVPKYKIEKKLKEMSQEQYR 208


>gi|37595775|ref|NP_932193.1| BlaZ [Staphylococcus aureus]
 gi|57854755|ref|YP_187532.1| beta-lactamase [Staphylococcus epidermidis RP62A]
 gi|258445835|ref|ZP_05694012.1| beta-lactamase [Staphylococcus aureus A6300]
 gi|282875039|ref|ZP_06283913.1| beta-lactamase [Staphylococcus epidermidis SK135]
 gi|537341|gb|AAA26647.1| beta-lactamase [Staphylococcus aureus]
 gi|11230703|emb|CAC16665.1| beta-lactamase [Staphylococcus haemolyticus]
 gi|35186913|gb|AAQ84127.1| BlaZ [Staphylococcus aureus]
 gi|57635988|gb|AAW52777.1| beta-lactamase [Staphylococcus epidermidis RP62A]
 gi|257855411|gb|EEV78349.1| beta-lactamase [Staphylococcus aureus A6300]
 gi|281296178|gb|EFA88698.1| beta-lactamase [Staphylococcus epidermidis SK135]
 gi|281334356|gb|ADA61440.1| Beta-lactamase [Staphylococcus epidermidis]
          Length = 281

 Score = 36.5 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE----TNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +     S         +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSSHAKELNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MAYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|189203237|ref|XP_001937954.1| beta-lactamase family protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985053|gb|EDU50541.1| beta-lactamase family protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 442

 Score = 36.5 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 41/144 (28%), Gaps = 12/144 (8%)

Query: 18  PFLSIAETNKLPYYTL--LDTNTGHVIAENYPDHPWNP-A-------SLTKLMTAYVVFS 67
                 +   LP   +  +D     V+  +       P A       SLTK++ A     
Sbjct: 21  ATKPGTDNIILPAAIVHIVDEQNN-VLFSHGASANKPPTAESMTIIQSLTKIVGAMAYMK 79

Query: 68  FLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
            ++     L  P TI+K   E    N                    +     A  +    
Sbjct: 80  LVERDLTTLDDPATITKWLPELTAKNVLTGYTMDGETGQKQYQFEDRKGEITARMLMNHT 139

Query: 128 CKTEKK-FVQHMNNTSKNLGLSAT 150
                  F + + +  ++LG+  T
Sbjct: 140 YGGGHTFFNKLLFDYVQDLGVWET 163


>gi|157368881|ref|YP_001476870.1| beta-lactam binding protein AmpH [Serratia proteamaculans 568]
 gi|157320645|gb|ABV39742.1| beta-lactamase [Serratia proteamaculans 568]
          Length = 380

 Score = 36.5 bits (82), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+     E +  L  P
Sbjct: 77  PDSLIRIASITKLMTSEVMVKMAAEGRVKLNDP 109


>gi|270269208|gb|ACZ66200.1| Beta-lactamase [Staphylococcus aureus]
          Length = 281

 Score = 36.5 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +++IA+A++ +     S             N       LDT +G    +   D  +
Sbjct: 1   MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALDTKSGKE-VKFNADKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   + I+K+             G  + L   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKVHINKDDIVAYSPILEKYVGKDIALKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I   +       ++ +    KNLG   T+ +   
Sbjct: 118 MKYSDNTANNKIINEI-----GGIKKIKKRLKNLGDKVTNPVRYE 157


>gi|332527255|ref|ZP_08403323.1| beta-lactamase [Rubrivivax benzoatilyticus JA2]
 gi|332111675|gb|EGJ11656.1| beta-lactamase [Rubrivivax benzoatilyticus JA2]
          Length = 289

 Score = 36.5 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 68/254 (26%), Gaps = 18/254 (7%)

Query: 1   MRQ--FLVIIAMAMLSNIFPFLS-IAETNKLPYYT-----------LLDTNTGHVIAENY 46
           M++  F    A+ +     P L+  A                      D  TG  +  + 
Sbjct: 1   MKRRSFHAWAALTLAVAGRPALALEAGDADAFGAIERSVAGRLGVCAYDLETGRSL-GHR 59

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGS-TMTLD 105
            D  +   S  K + A  V + +   +  L   I   + A       ++   G   MT+ 
Sbjct: 60  QDERFAMCSTFKWLLAAAVLARVDRGQERLERRIVFGREALLEYAPTTSRHAGGAGMTVA 119

Query: 106 NALKLLIVKSANDIAVAIAESLCKTE--KKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
              +  +  S N  A  + ++L        +V+ + + +  L         A    +   
Sbjct: 120 ELCEAALTLSDNTAANLLLDTLGGPGGLTAWVRTLGDRTTRLDRREPDLNEARPGDERDT 179

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
            T A  +  L   +            +               A          KTG    
Sbjct: 180 TTPAAMVLALRQAVFGGALSRRGGDLLLQWMTASTTGLKRLRAGFPPDWRVADKTGTGAQ 239

Query: 224 SGFNIVASAIQGDQ 237
              + VA      +
Sbjct: 240 GTTHDVAVVWAPGR 253


>gi|322385870|ref|ZP_08059513.1| peptidase family S11 [Streptococcus cristatus ATCC 51100]
 gi|321270155|gb|EFX53072.1| peptidase family S11 [Streptococcus cristatus ATCC 51100]
          Length = 350

 Score = 36.5 bits (82), Expect = 6.1,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 23/223 (10%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G          P    S  KL    +V   +   K  L     I+  + EY   + 
Sbjct: 118 DLTSGQT-YAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSLEERFDITNTSYEYKGEHD 176

Query: 95  TFKKGST--MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +       M++ +  +  +V S N  A A+AE L   +K +        +  G S    
Sbjct: 177 NYVAAFNGAMSIPDMQEYSLVYSENTPAYALAERLGGMDKAYS-----MFERYGRSKAKI 231

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                     + TT      +   +  +  +Y            G  +P   +    +  
Sbjct: 232 KTI----SRENKTTTDYYIQVLEYLWNNQEKYKDILY-----FIGVSFPGEYYKRYLYDL 282

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIAVI----LGALDRNT 251
               K G+   +    V + +  ++  I  +    LG     +
Sbjct: 283 TIYQKPGYVREALN--VDAIVMEEKPYIVALYTAYLGGSTEAS 323


>gi|327468966|gb|EGF14438.1| peptidase family S11 [Streptococcus sanguinis SK330]
          Length = 386

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAINDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|47565473|ref|ZP_00236514.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
 gi|47557463|gb|EAL15790.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
          Length = 339

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+     +     AS+ K++ A      + E K     
Sbjct: 33 NGEVLTSINENKKLPLASMAKIVIAVEFAKQVSEGKISRDE 73


>gi|255264412|ref|ZP_05343754.1| penicillin-binding protein 2 [Thalassiobium sp. R2A62]
 gi|255106747|gb|EET49421.1| penicillin-binding protein 2 [Thalassiobium sp. R2A62]
          Length = 652

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 26/152 (17%), Gaps = 43/152 (28%)

Query: 27  KLPYYTLLDTNTGHV---------------------------------------IAENYP 47
                 ++D  TG V                                       +A    
Sbjct: 266 DSASAVVIDVETGDVRAIASAPAFDPNMFVRGISVANWDALNERDTPRNQQKRPLAAKAV 325

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
              + P S  K++TA                 +       E         K S     N 
Sbjct: 326 QGLYPPGSTFKMVTALAALEA---GVVDPEETVRC-PGHLEVADVKFHCWKRSGHGNINL 381

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
            + L                     +  + + 
Sbjct: 382 HESLKQSCDVYYYDIAQRVGIDKISEMAKRLG 413


>gi|225907432|gb|ACO36249.1| beta-lactamase Pen-B2 [Burkholderia cenocepacia]
          Length = 312

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 67/226 (29%), Gaps = 5/226 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT +G +I E+     +   S  K M +  V +   E+  +L   +T +K         
Sbjct: 73  IDTASGRII-EHRAGERFPFCSTFKAMLSAAVLAQSVERPGLLQQRVTYTKADLVNYSPV 131

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           S    GS MT+    +  I  S N  A  + +          + + + + +  L    T 
Sbjct: 132 SEKHVGSGMTVAALCEAAIQYSDNSAANLLMKLIGGPSAVTVYARSIGDDTFRLDRWETE 191

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T A   A L      D        Q+       K       A     
Sbjct: 192 LNTALPGDPRDTTTPAAMAASLRVLTLGDALPAAQRAQLVAWLRGNKVGDKRIRAGVPAG 251

Query: 212 GADGMKTGFTCASGFNIVASAIQGDQ-SLIAVILGALDR-NTRNKV 255
              G KTG       N         +  ++  +     R + R K 
Sbjct: 252 WTVGDKTGTGDYGTTNDAGVIWPTSRAPIVLAVYYTQTRADARAKD 297


>gi|254441050|ref|ZP_05054543.1| Penicillin-binding Protein dimerisation domain family
           [Octadecabacter antarcticus 307]
 gi|198251128|gb|EDY75443.1| Penicillin-binding Protein dimerisation domain family
           [Octadecabacter antarcticus 307]
          Length = 654

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 21/98 (21%), Gaps = 4/98 (4%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGST 101
           +A       + P S  K++TA        +        +      ++         K S 
Sbjct: 320 LAAKTVQGTYPPGSTFKMVTALAALE---DGAIGPDETVRC-VGHADVSDVRFHCWKRSG 375

Query: 102 MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMN 139
               N  + L                        + + 
Sbjct: 376 HGNMNLNESLKQSCDVYYYDICQRVGIDKIAAMGRKLG 413


>gi|197104456|ref|YP_002129833.1| beta-lactamase [Phenylobacterium zucineum HLK1]
 gi|196477876|gb|ACG77404.1| beta-lactamase [Phenylobacterium zucineum HLK1]
          Length = 352

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 43/165 (26%), Gaps = 10/165 (6%)

Query: 33  LLDTNTGH--VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA--SE 88
           L++  +G    +A    D  +   S+ K++    V S     +  L    ++++      
Sbjct: 70  LMNLESGEAFTLA---GDRRFPMQSVFKMLLGAAVLSEADAGRLPLDERHSLTEEQLSPP 126

Query: 89  YPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKT---EKKFVQHMNNTSKNL 145
           Y P    +      T    L   +  S N  A  + + +      +           +  
Sbjct: 127 YSPIAEAWPARRDYTARELLTAAVSVSDNTAADVLMKRIGGPGAVDAWLQARRIEEIRVD 186

Query: 146 GLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
                    AHG+               +   +    +       
Sbjct: 187 RYERQLQTEAHGLPSFRPSWRTEAAFSTALAARPQTARMSAMRAY 231


>gi|169665625|gb|ACA63497.1| beta-lactamase TEM [Escherichia coli]
          Length = 163

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 2/123 (1%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDN 106
           P+  +   S  K++    V S +   +  L   I  S+N        +       MT+  
Sbjct: 1   PEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRE 60

Query: 107 ALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHY 164
                I  S N  A  +  ++   ++   F+ +M +    L         A    +    
Sbjct: 61  LCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTT 120

Query: 165 TTA 167
             A
Sbjct: 121 MPA 123


>gi|119714296|ref|YP_921261.1| peptidoglycan glycosyltransferase [Nocardioides sp. JS614]
 gi|119534957|gb|ABL79574.1| cell elongation-specific peptidoglycan D,D-transpeptidase
           [Nocardioides sp. JS614]
          Length = 490

 Score = 36.5 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 31/119 (26%), Gaps = 3/119 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LD +    +          P S  K++TA         K      P   +    +     
Sbjct: 199 LDADPTQPLLNRAIQTRLPPGSTFKILTAAAAIDNGLYKADDP-VPGGATFQLPQTSGPT 257

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
                       N  ++   ++                +   + M  T++  G ++ +F
Sbjct: 258 GEIDNEGRSCGANNARIPFTQALAQSCNTSF--AQIAIEVGAEDMAKTAEGFGFNSHYF 314


>gi|289641088|ref|ZP_06473256.1| beta-lactamase [Frankia symbiont of Datisca glomerata]
 gi|289509029|gb|EFD29960.1| beta-lactamase [Frankia symbiont of Datisca glomerata]
          Length = 299

 Score = 36.5 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 12/78 (15%)

Query: 9  AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-------YPDHPWNPASLTKLMT 61
          A+A+L +                      TG  +            D  +  AS++KL++
Sbjct: 16 AVAVLLSGGSADPGGPAGSSTAA-----GTGDALGAVTVAGSVGDADRLFRLASVSKLLS 70

Query: 62 AYVVFSFLKEKKAMLTTP 79
          AY V   ++E    L  P
Sbjct: 71 AYAVLIAVEEGVFALDDP 88


>gi|238753036|ref|ZP_04614493.1| Penicillin-binding protein ampH [Yersinia rohdei ATCC 43380]
 gi|238708757|gb|EEQ01018.1| Penicillin-binding protein ampH [Yersinia rohdei ATCC 43380]
          Length = 380

 Score = 36.5 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+    ++    LT P
Sbjct: 81  PDSLIRIASITKLMTSEVMVKMAEDGTVKLTDP 113


>gi|370769|prf||1616230A beta lactamase
          Length = 304

 Score = 36.5 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 8/215 (3%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +DT TG  +     D  +  AS  K  TA +V    +     L   +T ++         
Sbjct: 66  VDTGTGEEVFHR-ADERFGYASTHKAFTAALVL--GQNTPEELEEVVTYTEEDLVDYSPI 122

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
           +     + MTL       +  S N  A  + E L    + F + M     ++  +     
Sbjct: 123 TEQHVDTGMTLLEVADAAVRHSDNTAANLLFEEL-GGPEGFEEDMRELGDDVISADRIET 181

Query: 154 NAHGVV---QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
             + V         T       L   +  D  +      +  + +          A    
Sbjct: 182 ELNEVPPGGTRDTSTPRAMAGSLEAFVLGDVLEEGPRDVLTEMLLNNTTGDELIRAGVPE 241

Query: 211 LGADGMKT-GFTCASGFNIVASAIQGDQSLIAVIL 244
               G KT G +  S  +I       D  ++  ++
Sbjct: 242 DWRVGDKTGGGSHGSRNDIAVVWPPEDDPIVIAVM 276


>gi|229155374|ref|ZP_04283484.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228628089|gb|EEK84806.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
          Length = 370

 Score = 36.5 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G V+     +     AS+ K++ A      + E K     
Sbjct: 64  NGEVLTSINENKKLPLASMAKIVIAVEFAKQVSEGKISRDE 104


>gi|258654695|ref|YP_003203851.1| beta-lactamase [Nakamurella multipartita DSM 44233]
 gi|258557920|gb|ACV80862.1| beta-lactamase [Nakamurella multipartita DSM 44233]
          Length = 268

 Score = 36.5 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 54 ASLTKLMTAYVVFSFLKEKKAMLTTP 79
          ASLTK++TA  V     E    L   
Sbjct: 38 ASLTKVITALTVLDASVEGVISLDDE 63


>gi|187934516|ref|YP_001884511.1| N-acetylmuramoyl-L-alanine amidase CwlD [Clostridium botulinum B
          str. Eklund 17B]
 gi|187722669|gb|ACD23890.1| N-acetylmuramoyl-L-alanine amidase CwlD [Clostridium botulinum B
          str. Eklund 17B]
          Length = 220

 Score = 36.5 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHV 41
          M++ L I  +  L    P   +AE NK  +  ++D   G +
Sbjct: 3  MKRVLSIFCIIFLILGIPTRVLAEENKSKHVIVIDPGHGGI 43


>gi|38155781|gb|AAR12671.1| beta-lactamase [Staphylococcus aureus]
          Length = 179

 Score = 36.5 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNI----FPFLSIAETNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +      P        +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSPHAKKLNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQIPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|189502343|ref|YP_001958060.1| hypothetical protein Aasi_0975 [Candidatus Amoebophilus asiaticus
          5a2]
 gi|189497784|gb|ACE06331.1| hypothetical protein Aasi_0975 [Candidatus Amoebophilus asiaticus
          5a2]
          Length = 532

 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 20/86 (23%)

Query: 2  RQFLVI-IAMAMLSNIFPFLSIAETNKLPYYT-------------------LLDTNTGHV 41
          ++ L + I+ +++   +   +  E  KL                        ++T T  V
Sbjct: 5  KKILYLGISFSLVFVSYSSKANNEQLKLSSIVEIQGITDESVLKNASVSLYAVNTATREV 64

Query: 42 IAENYPDHPWNPASLTKLMTAYVVFS 67
          I    P     PAS  KL T      
Sbjct: 65 IHSINPHISLVPASSLKLFTTATALE 90


>gi|218896729|ref|YP_002445140.1| hypothetical protein BCG9842_B3583 [Bacillus cereus G9842]
 gi|218544366|gb|ACK96760.1| conserved domain protein [Bacillus cereus G9842]
          Length = 363

 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+     +     AS+ K++ A      + E K     
Sbjct: 57 NGEVLTSINENKKLPLASMAKIVIAVEFAKQVSEGKISRDE 97


>gi|56476696|ref|YP_158285.1| D-alanyl-D-alanine carboxypeptidase [Aromatoleum aromaticum EbN1]
 gi|56312739|emb|CAI07384.1| D-Ala-D-Ala carboxypeptidase 3 (S13) family [Aromatoleum
          aromaticum EbN1]
          Length = 482

 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 11 AMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          A+ +   P  ++A   +         ++G        + P NPAS+ KL+TA+    
Sbjct: 40 ALAAAHIPQSAVALWVQA-------VDSGEPQLRVNAERPMNPASVMKLVTAFAALE 89


>gi|228984887|ref|ZP_04145057.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774837|gb|EEM23233.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 370

 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 38  TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G V+     +     AS+ K++ A      + E K     
Sbjct: 64  NGEVLTSINENKKLPLASMAKIVIAVEFAKQVSEGKISRDE 104


>gi|157884145|pdb|2UWX|A Chain A, Active Site Restructuring Regulates Ligand Recognition In
           Class A Penicillin-Binding Proteins
          Length = 494

 Score = 36.5 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 38/145 (26%), Gaps = 15/145 (10%)

Query: 32  TLLDTNTGHVI-------AENYP-----DHPWNPASLTKLMTAY-VVFSFLKEKKAMLTT 78
            L+D  TG ++        +        D   +PA  TK + AY +           + +
Sbjct: 128 VLMDNQTGAILGFVGGRNYQENQNNHAFDTKRSPAXTTKPLLAYGIAIDQGLMGSETILS 187

Query: 79  PITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHM 138
               +          ++   G     +       + +       +        K +++ M
Sbjct: 188 NYPTNFANGNPIMYANSKGTGMMTLGEALNYSWNIPAYW--TYRMLRENGVDVKGYMEKM 245

Query: 139 NNTSKNLGLSATHFMNAHGVVQHGH 163
                  G+ +        V    H
Sbjct: 246 GYEIPEYGIESLPMGGGIEVTVAQH 270


>gi|330859129|emb|CBX69483.1| hypothetical protein YEW_JC39970 [Yersinia enterocolitica W22703]
          Length = 161

 Score = 36.5 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+    ++    LT P
Sbjct: 77  PDSLIRIASITKLMTSEVMVKLAEDGTVKLTDP 109


>gi|294630438|ref|ZP_06708998.1| beta-lactamase [Streptomyces sp. e14]
 gi|292833771|gb|EFF92120.1| beta-lactamase [Streptomyces sp. e14]
          Length = 392

 Score = 36.5 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 3/47 (6%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
          + D  TG  +     D      S++K  TA  V   ++  K  L  P
Sbjct: 33 VADVATGRPV---RADMRQRVGSISKTFTAVAVLQQVERGKVRLDDP 76


>gi|38155773|gb|AAR12666.1| beta-lactamase [Staphylococcus aureus]
          Length = 179

 Score = 36.5 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +++IA+A++ +     S             N       LDT +G    +   D  +
Sbjct: 1   MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALDTKSGKE-VKFNADKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   + I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAE 125
           +  S N     I  
Sbjct: 118 MKYSDNTANNKIIN 131


>gi|76786907|ref|YP_328739.1| hypothetical protein SAK_0012 [Streptococcus agalactiae A909]
 gi|77405633|ref|ZP_00782722.1| protein of unknown function [Streptococcus agalactiae H36B]
 gi|76561964|gb|ABA44548.1| conserved hypothetical protein [Streptococcus agalactiae A909]
 gi|77175777|gb|EAO78557.1| protein of unknown function [Streptococcus agalactiae H36B]
          Length = 428

 Score = 36.5 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 53/222 (23%), Gaps = 16/222 (7%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
             +A    D     AS+ KL T Y     +K  K  L +      N +++P S      G
Sbjct: 216 QTVAGINIDRSMYSASIAKLATLYASQEQVKLGKLSLDSKFEYKDNVNQFPNSYDPSGSG 275

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                 +     + +     A             +V   N                H  +
Sbjct: 276 KLEKKADHKLYTVKELLEATAKESDNVATNMLGYYVN--NQYDSMFQTQVDTISGMHWDM 333

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +      ++      +     +  +      +  K      A             
Sbjct: 334 KKRQISPQAAGKMMEAIYYQNGDIVNYLSKTDFDNTRIPKNIPVKVAHKIGD-------- 385

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
              A  +   A+ +  +Q  I +I       +       +  
Sbjct: 386 ---AYDYKHDAAIVYAEQPFIMIIF---TDKSSYDDITKIAD 421


>gi|300785357|ref|YP_003765648.1| beta-lactamase class C [Amycolatopsis mediterranei U32]
 gi|299794871|gb|ADJ45246.1| beta-lactamase class C [Amycolatopsis mediterranei U32]
          Length = 461

 Score = 36.5 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  +L+T TG    E   D  +   S+TK+ TA +    + +    L  P
Sbjct: 36 EIIDRAAGVLNTGTG---VEADVDSLFQIGSITKVWTATLAMQLVDDGVLDLDQP 87


>gi|312140262|ref|YP_004007598.1| beta-lactamase [Rhodococcus equi 103S]
 gi|311889601|emb|CBH48918.1| putative beta-lactamase [Rhodococcus equi 103S]
          Length = 273

 Score = 36.5 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  ++D + G           +  AS+TKL+ AY     ++E    L  P
Sbjct: 11 PVDNASAAVVDGSRGVAHFG-DGQRIYPLASVTKLLCAYATLVAVEEGAVELDQP 64


>gi|325676991|ref|ZP_08156662.1| beta-lactamase [Rhodococcus equi ATCC 33707]
 gi|325552153|gb|EGD21844.1| beta-lactamase [Rhodococcus equi ATCC 33707]
          Length = 273

 Score = 36.5 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 25 TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                  ++D + G           +  AS+TKL+ AY     ++E    L  P
Sbjct: 11 PVDNASAAVVDGSRGVAHFG-DGQRIYPLASVTKLLCAYATLVAVEEGAVELDQP 64


>gi|153825682|ref|ZP_01978349.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Vibrio cholerae MZO-2]
 gi|149740619|gb|EDM54728.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Vibrio cholerae MZO-2]
          Length = 487

 Score = 36.5 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 52/185 (28%), Gaps = 7/185 (3%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            +I +           +        Y  L+ D        E      + PAS  K++TA 
Sbjct: 22  FLIASPIYAQTPLTAATTKLPQGARYSLLIEDAALQQNTLELNTHLYYPPASTQKILTAL 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
                L ++    T  + + ++       + T       TL  A+K      +       
Sbjct: 82  AAKLELGDEFRFHTDLMHLGQDWIIRFSGDPTLTTADLTTLLKAMK----AQSGGSIEGD 137

Query: 124 AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQ 183
                     + + +      LG+  +   +A  +   G+   A        + +   P+
Sbjct: 138 LWLDNSVFNGYERAVGWPWDILGVCYSAPASAINLD--GNCIQASIYTEPQGKTRVYVPE 195

Query: 184 YMHYF 188
           +    
Sbjct: 196 HYPVH 200


>gi|75758994|ref|ZP_00739103.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|74493529|gb|EAO56636.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
          Length = 339

 Score = 36.1 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 13/42 (30%)

Query: 37 NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G V+     +     AS  K++ A      + E K     
Sbjct: 32 KNGEVLTSINENKKLPLASTAKIVIAVEFAKQVSEGKISRDE 73


>gi|329851458|ref|ZP_08266215.1| beta-lactamase [Asticcacaulis biprosthecum C19]
 gi|328840304|gb|EGF89876.1| beta-lactamase [Asticcacaulis biprosthecum C19]
          Length = 157

 Score = 36.1 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 26/95 (27%), Gaps = 20/95 (21%)

Query: 3  QFLVIIAMAMLSNIFPFLS--------IAETNKLPYYTLLDTNTGHVIAE-----NY--- 46
          Q       A+LS+  P  +                   +   + G V             
Sbjct: 2  QLTAFALYALLSSAIPASADIDAAIHKAMADTGAKGLAIAVIDNGQVAYAQAYGIRNTNN 61

Query: 47 ----PDHPWNPASLTKLMTAYVVFSFLKEKKAMLT 77
              PD     ASLTK + AY     + + K  L 
Sbjct: 62 DPLTPDTIMYGASLTKTVMAYTALQLVDQGKLNLD 96


>gi|124008037|ref|ZP_01692736.1| beta-lactamase [Microscilla marina ATCC 23134]
 gi|123986451|gb|EAY26257.1| beta-lactamase [Microscilla marina ATCC 23134]
          Length = 301

 Score = 36.1 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/153 (9%), Positives = 41/153 (26%), Gaps = 6/153 (3%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               +      S+ K   A  V   + + K  L   I I++          +  +     
Sbjct: 56  SINGNKRLPMQSVFKYHLALAVLHQVDQGKFSLNEKIAITQKMVNAYSHLWSPLRKKYPN 115

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN------AHG 157
                   I++     +  +   +        + + +    +G+     ++      A  
Sbjct: 116 GAKLTLAEILRYTVAWSDNLGCDVLFKLIGGTKVVESYVHKIGVKDIAIVHNEIVMQAKW 175

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQI 190
             Q+ ++TTA     +      +    +     
Sbjct: 176 KHQYENWTTANAANQVLQLFFENNDNLLSTKSY 208


>gi|239816205|ref|YP_002945115.1| beta-lactamase [Variovorax paradoxus S110]
 gi|239802782|gb|ACS19849.1| Beta-lactamase [Variovorax paradoxus S110]
          Length = 299

 Score = 36.1 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 68/235 (28%), Gaps = 10/235 (4%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
            DT TG    ++     +   S  K+M +  + +    +  +L   ++ +++        
Sbjct: 59  FDTATGAR-VQHRATERFPMCSTFKMMASAAILARSSREPGLLEQRVSYARSDILPNSPI 117

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +    G  M +       I  S N  A  + +         +F + + +    L    T 
Sbjct: 118 TEKNLGQGMAVSALCAATIQYSDNAAANLLMKILGGPSAVTEFARSIGDAVFRLDRWETE 177

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
             +A         +     A L   +  D        Q++   +          A     
Sbjct: 178 LNSAIPGDPRDTTSPEAMAASLQRLVLGDGLAAAQRSQLEAWLLGNTTGATRIRAGVPAD 237

Query: 212 GADGMKTGF-TCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASL 259
              G KTG  +  +  +I          L+  +        A  RN     +A +
Sbjct: 238 WKVGDKTGAGSYGTVNDIGVLWPPAGAPLVMAVYLTFPTPDAPGRNDVIASAARI 292


>gi|171692625|ref|XP_001911237.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946261|emb|CAP73062.1| unnamed protein product [Podospora anserina S mat+]
          Length = 408

 Score = 36.1 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           +  +  AS TKL+T       + +    L +P TIS+  +    +               
Sbjct: 55  NDIFYLASATKLITTIAALQAIDDGHLSLDSPDTISQ-FAPELVNRPILSPDGATLTPPT 113

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
            ++ + +  +  +      L      + + 
Sbjct: 114 NRITLRQLLSHTSGLAYHFLHPYLSAWREK 143


>gi|325697130|gb|EGD39017.1| peptidase family S11 [Streptococcus sanguinis SK160]
          Length = 359

 Score = 36.1 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 67/222 (30%), Gaps = 20/222 (9%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 126 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 184

Query: 95  TFKKGST--MTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHF 152
            +       M + +  +  +V S N  A A+AE L   EK +     +     G S    
Sbjct: 185 NYVGAFNGAMRISDMQEYSLVYSENTPAYALAERLGGMEKAY-----DMFSRYGQSKADI 239

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                     + TT      +   +  +  +Y       G    G+ Y      +  +  
Sbjct: 240 KTISR---ENNKTTTDYYIQVLEYLSKNQEKYKDILYYIGESFPGEYYKRYLRDITIY-- 294

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIA---VILGALDRNT 251
               K G+   +  N+ A  ++    +IA     LG     +
Sbjct: 295 ---QKPGYVREAL-NVDALVMEEKHYIIALYTAYLGGSTEAS 332


>gi|289449407|ref|YP_003475640.1| putative lipoprotein [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289183954|gb|ADC90379.1| putative lipoprotein [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 382

 Score = 36.1 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 48/183 (26%), Gaps = 3/183 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSN 93
           D  +G    E  P+  +  AS  KL  A      ++            +         +N
Sbjct: 164 DIRSGER-YEYNPEQRYMAASCMKLGMAMACAQLVERGILNWNMLIPCVPDEVDYIYQAN 222

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                G   +L + L   +  S N     +        ++   +++  +     + T   
Sbjct: 223 ELAALGEKCSLRDLLSKALRYSNNSATSVLFHFFKINGRQLHHYIDEATGMHYAADTTMS 282

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
              G+                +R+  +      +      E+      N    +  +   
Sbjct: 283 AREGI-NLLAGLVQNPNGCTGYRLIINEIHQSTWNNYLTRELPRNICANKYGEMNGYTNE 341

Query: 214 DGM 216
            G+
Sbjct: 342 LGI 344


>gi|229046728|ref|ZP_04192372.1| D-stereospecific peptide hydrolase [Bacillus cereus AH676]
 gi|229110470|ref|ZP_04240040.1| D-stereospecific peptide hydrolase [Bacillus cereus Rock1-15]
 gi|296503539|ref|YP_003665239.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
 gi|228672954|gb|EEL28228.1| D-stereospecific peptide hydrolase [Bacillus cereus Rock1-15]
 gi|228724606|gb|EEL75919.1| D-stereospecific peptide hydrolase [Bacillus cereus AH676]
 gi|296324591|gb|ADH07519.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis BMB171]
          Length = 388

 Score = 36.1 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEK 72
              I    S           + D +T   +     D+ +   S+TK  TA  V   + E 
Sbjct: 63  AVGILAKASNNGKTSSFTAGVADLSTKKPV---NSDYRFRIGSVTKTFTATTVLQLVGEN 119

Query: 73  KAMLTTP 79
           +  L  P
Sbjct: 120 RLQLDDP 126


>gi|295822171|gb|ADG36739.1| extended-spectrum class A beta-lactamase [Rahnella sp. 285-Celery]
          Length = 218

 Score = 36.1 bits (81), Expect = 7.0,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 55/203 (27%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + KK +LT  + + K+        +       MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKESEVKKNLLTQHVGLKKSDLVNYNPITEKHLNEGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +       +  S N     + E L    K              L  T       +     
Sbjct: 65  IGELAAAALQYSDNTAMNKLIEHLGGPHKVTDYARTLGDNTFRLDRTEPTLNTAIPGDER 124

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFT 221
            TT+     LS +  T         + + +E                      G KTG  
Sbjct: 125 DTTSPRAMALSLQHATLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWIVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  L+ V 
Sbjct: 185 DYGTTNDIAVIWPENKAPLVLVT 207


>gi|317049065|ref|YP_004116713.1| beta-lactamase [Pantoea sp. At-9b]
 gi|316950682|gb|ADU70157.1| beta-lactamase [Pantoea sp. At-9b]
          Length = 389

 Score = 36.1 bits (81), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D     ASL+KLMT+ V+    +  +  L  P
Sbjct: 80  DSLIRIASLSKLMTSEVMVKMAERGQIRLDDP 111


>gi|226944008|ref|YP_002799081.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Azotobacter vinelandii DJ]
 gi|226718935|gb|ACO78106.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Azotobacter vinelandii DJ]
          Length = 486

 Score = 36.1 bits (81), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 11/22 (50%)

Query: 46 YPDHPWNPASLTKLMTAYVVFS 67
            D P NPAS  KL+T Y    
Sbjct: 65 NADVPLNPASTMKLVTTYAALE 86


>gi|229031204|ref|ZP_04187212.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
 gi|228730100|gb|EEL81072.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus AH1271]
          Length = 343

 Score = 36.1 bits (81), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 45/172 (26%), Gaps = 4/172 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    P+     AS  KL+ A      + E K   ++   +S N    
Sbjct: 25  SALLV-KRNDKVVYSVNPNVVLPVASTMKLIVALEYTKQVTEGKIDPSS--FVSINDINR 81

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
               +T             K   +         +A+ + K               L    
Sbjct: 82  YYVPNTDGGAQDRWQRYLQKTDKITEGAVSLEEVAKGMVKFSSNANAEYLMEVLGLDNIN 141

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
            +   +  +  H           +   +  +     +  + K  E+  ++Y 
Sbjct: 142 RNL-QSLSLPAHQPLFPIVSSLYIPGYLHKELHVPKYKIEKKLKEMSQEQYR 192


>gi|238788607|ref|ZP_04632399.1| Penicillin-binding protein ampH [Yersinia frederiksenii ATCC 33641]
 gi|238723202|gb|EEQ14850.1| Penicillin-binding protein ampH [Yersinia frederiksenii ATCC 33641]
          Length = 380

 Score = 36.1 bits (81), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+    ++    LT P
Sbjct: 81  PDSLIRIASITKLMTSEVMVKLAEDGTVKLTDP 113


>gi|296393398|ref|YP_003658282.1| hypothetical protein Srot_0978 [Segniliparus rotundus DSM 44985]
 gi|296180545|gb|ADG97451.1| hypothetical protein Srot_0978 [Segniliparus rotundus DSM 44985]
          Length = 300

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 60/238 (25%), Gaps = 38/238 (15%)

Query: 15  NIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH--PWNPASLTKLMTAYVVFSFLKEK 72
            +     +A       Y L D  TG V     P        AS  KL  A  +F+  +  
Sbjct: 69  VVQANALVAAQAPGAGYVLRDRATGGVY--RNPHAGDSVYAASTIKLAMAVDLFTRDRAG 126

Query: 73  KAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK 132
              L+                            + ++ ++  S +  A  +         
Sbjct: 127 LVTLSAAD------------------------RSLIQNMLHSSDDGAADTLWMKYW---- 158

Query: 133 KFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKG 192
               HM   +       T   +  G      Y  A   +         F           
Sbjct: 159 -GEDHMAFLNDFPNYGMTDLRSQGGYDGIDVYWGAMSCSPNDLDRLMQFVLEKMDPADTA 217

Query: 193 LEIKGKKYPNTNWAVGT---FLGAD-GMKTGFTCASGFNIVASAIQG-DQSLIAVILG 245
             +   +  + N   G       A  G K G++   G+ + +    G  Q  I  I+ 
Sbjct: 218 YIVNEMQNVDPNQQWGVWGAGPSAHPGDKNGWSGIGGWVLHSVGFAGLGQRYILAIMN 275


>gi|83590885|ref|YP_430894.1| peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
 gi|83573799|gb|ABC20351.1| Peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
          Length = 333

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 1/57 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPP 91
           D  +G        D P   AS  KL     + S + +        +T +        
Sbjct: 107 DLASGQS-FGINADTPLPAASTVKLPAVLFINSLVDQGVLDWQQKLTYNSATDYQGG 162


>gi|238786269|ref|ZP_04630212.1| Penicillin-binding protein ampH [Yersinia bercovieri ATCC 43970]
 gi|238712813|gb|EEQ04882.1| Penicillin-binding protein ampH [Yersinia bercovieri ATCC 43970]
          Length = 380

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+     +    LT P
Sbjct: 81  PDSLIRIASITKLMTSEVMVKLADDGTVKLTDP 113


>gi|322386422|ref|ZP_08060051.1| beta-lactamase [Streptococcus cristatus ATCC 51100]
 gi|321269508|gb|EFX52439.1| beta-lactamase [Streptococcus cristatus ATCC 51100]
          Length = 427

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 14/44 (31%), Gaps = 1/44 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             TG   A   PD     AS+TK+   Y     L      L   
Sbjct: 212 LETGKE-AGINPDQQMYSASVTKIPYLYYAQEQLNNHSLSLDKK 254


>gi|268592244|ref|ZP_06126465.1| beta-lactamase [Providencia rettgeri DSM 1131]
 gi|291312293|gb|EFE52746.1| beta-lactamase [Providencia rettgeri DSM 1131]
          Length = 332

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 32/115 (27%), Gaps = 5/115 (4%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTT--PITISKNASEYPPSNSTFKKGSTMTLD 105
           D P   AS TK  TA  +    + +K  +       I    +    +       +   L 
Sbjct: 45  DTPLRIASNTKTFTAAAILRLAEMEKLSIDDAISEYIDPQYNTLLSTQYNTHAITIRHLL 104

Query: 106 NALKLLIVKSAND---IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                L+  +  D     +     +    ++   +M         + +   +  G
Sbjct: 105 EHSSGLLDHADGDYLKAVLKQPNYVWSRTEQIEMYMRKQFPTFSPAKSFIYSDTG 159


>gi|254512293|ref|ZP_05124360.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacteraceae bacterium KLH11]
 gi|221536004|gb|EEE38992.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Rhodobacteraceae bacterium KLH11]
          Length = 492

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 13/35 (37%)

Query: 33 LLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
          + D  TG  +          PAS+ K +TA     
Sbjct: 61 VADAETGTPLEVFGEGRSLPPASVAKALTALYALD 95


>gi|254422643|ref|ZP_05036361.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Synechococcus sp. PCC 7335]
 gi|196190132|gb|EDX85096.1| D-alanyl-D-alanine
           carboxypeptidase/D-alanyl-D-alanine-endopeptidase
           [Synechococcus sp. PCC 7335]
          Length = 504

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 6/27 (22%), Positives = 8/27 (29%)

Query: 42  IAENYPDHPWNPASLTKLMTAYVVFSF 68
           +          PAS  KL+T       
Sbjct: 90  LYARNAQEKLVPASNVKLLTTAAALQA 116


>gi|125973684|ref|YP_001037594.1| Beta-lactamase class A-like protein [Clostridium thermocellum ATCC
           27405]
 gi|256005767|ref|ZP_05430720.1| Beta-lactamase class A-like protein [Clostridium thermocellum DSM
           2360]
 gi|281417840|ref|ZP_06248860.1| Beta-lactamase class A-like protein [Clostridium thermocellum JW20]
 gi|125713909|gb|ABN52401.1| Beta-lactamase class A-like protein [Clostridium thermocellum ATCC
           27405]
 gi|255990267|gb|EEU00396.1| Beta-lactamase class A-like protein [Clostridium thermocellum DSM
           2360]
 gi|281409242|gb|EFB39500.1| Beta-lactamase class A-like protein [Clostridium thermocellum JW20]
 gi|316940121|gb|ADU74155.1| hypothetical protein Clo1313_1091 [Clostridium thermocellum DSM
           1313]
          Length = 383

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 62/236 (26%), Gaps = 23/236 (9%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           +D  +G           +  AS  K+     V+  +++      T +  ++         
Sbjct: 154 VDLESGKE-FGINDTEEFFAASTFKIPLNLYVYDMIRKGMLDPMTSLEYTEEDF--EGGT 210

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM 153
                  +      +K L+  S           L +   K    +    + LG       
Sbjct: 211 GIIWNNESFGKTFTIKELLRLSIVYSDNVAVNMLLRCVGKAN--VKEYMRRLGGVVV--- 265

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
                    + +  RDMA+    +         + +     +   K+ +    +      
Sbjct: 266 -----DDGKNVSCPRDMAMYLKEVYELSENGDPWGRELVQNMINTKFYDRLPVLLPKNLK 320

Query: 214 DGMKTG-FTCASGFNIVASAIQGDQSLIAVIL------GALDRNTRNKVSASLLSM 262
              KTG +T       +  A +     I V++      G         +S  +   
Sbjct: 321 IAHKTGNYTGVVHDVGIVYAEK---PYIVVVMTKNVKNGQSANKAIANISKMIYDY 373


>gi|22536198|ref|NP_687049.1| hypothetical protein SAG0013 [Streptococcus agalactiae 2603V/R]
 gi|25010087|ref|NP_734482.1| hypothetical protein gbs0012 [Streptococcus agalactiae NEM316]
 gi|76797981|ref|ZP_00780240.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
 gi|77414472|ref|ZP_00790622.1| protein of unknown function [Streptococcus agalactiae 515]
 gi|22533015|gb|AAM98921.1|AE014191_13 protein of unknown function [Streptococcus agalactiae 2603V/R]
 gi|23094438|emb|CAD45657.1| unknown [Streptococcus agalactiae NEM316]
 gi|76586661|gb|EAO63160.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
 gi|77159482|gb|EAO70643.1| protein of unknown function [Streptococcus agalactiae 515]
 gi|319746209|gb|EFV98478.1| beta-lactamase [Streptococcus agalactiae ATCC 13813]
          Length = 428

 Score = 36.1 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 53/222 (23%), Gaps = 16/222 (7%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
             +A    D     AS+ KL T Y     +K  K  L +      N +++P S      G
Sbjct: 216 QTVAGINIDRSMYSASIAKLATLYASQEQVKLGKLSLDSKFEYKDNVNQFPNSYDPSGSG 275

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                 +     + +     A             +V   N                H  +
Sbjct: 276 KLEKKADHKLYTVKELLEATAKESDNVATNMLGYYVN--NQYDSMFQTQVDTISGMHWDM 333

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +      ++      +     +  +      +  K      A             
Sbjct: 334 KKRQISPQAAGKMMEAIYYQNGDIVNYLSKTDFDNTRIPKNIPVKVAHKIGD-------- 385

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
              A  +   A+ +  +Q  I +I       +       +  
Sbjct: 386 ---AYDYKHDAAIVYAEQPFIMIIF---TDKSSYDDITKIAD 421


>gi|289449673|ref|YP_003475286.1| hypothetical protein HMPREF0868_0983 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184220|gb|ADC90645.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 394

 Score = 36.1 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 34/101 (33%), Gaps = 1/101 (0%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP-ITISKNASEYPPSNSTFKKGSTMTL 104
            PD+    AS  KL  A ++   + E +  L T     S +      +      G   +L
Sbjct: 177 NPDYARTAASTIKLPLALILLDQIAEGEFSLQTVLTYESDDYEGGSGTLQYSPIGGHYSL 236

Query: 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNL 145
              L  LIV+S N  A  +   L          +   +  L
Sbjct: 237 KQLLDFLIVESDNVAARMLMRWLHTYTGHQAMPLIQHTYGL 277


>gi|318606407|emb|CBY27905.1| penicillin-binding protein AmpH [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 376

 Score = 36.1 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+    ++    LT P
Sbjct: 77  PDSLIRIASITKLMTSEVMVKLAEDGTVKLTDP 109


>gi|300693088|ref|YP_003749061.1| oxacillin hydrolase (class-d beta-lactamase) signal peptide protein
           [Ralstonia solanacearum PSI07]
 gi|299075125|emb|CBJ34407.1| putative oxacillin hydrolase (Class-d beta-lactamase) signal
           peptide protein [Ralstonia solanacearum PSI07]
          Length = 272

 Score = 36.1 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 1/122 (0%)

Query: 32  TLLDTNTGH-VIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  TG  ++ E        PAS  K+  + + +     K     T      +     
Sbjct: 28  LVADAATGQPIVQEGQCGERVTPASTFKIALSLMGYDAGFLKDEHAPTLAFKPGDPDWGG 87

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
            +       +     + +      +    A      + +          +  +N GL  +
Sbjct: 88  AAWHEPTDPARWLQYSVVWYSQRIAHALGAERFQSYVRQFGYGNQDVAGDPGRNNGLDRS 147

Query: 151 HF 152
             
Sbjct: 148 WI 149


>gi|268324167|emb|CBH37755.1| conserved hypothetical protein, beta lactamase family [uncultured
           archaeon]
          Length = 463

 Score = 36.1 bits (81), Expect = 7.3,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 16/34 (47%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +  +   S TK+ T+ ++   ++E +  L  P
Sbjct: 81  NENTIYEIGSTTKVFTSLILADMVEEGEISLDDP 114


>gi|300771771|ref|ZP_07081642.1| possible beta-lactamase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761157|gb|EFK57982.1| possible beta-lactamase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 300

 Score = 36.1 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 32/142 (22%), Gaps = 16/142 (11%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +  AS+ K+     VF+ + + +                       +      L 
Sbjct: 59  NADSIFPTASIIKVPILAGVFNKIGKGELKYNDKF-----------VYRQSRVYGGSGLM 107

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
              K  I    + +A  +          + Q +       G      M+  G+      +
Sbjct: 108 QFFKDSIETDLSTMAALMIGYSDNVTSIWCQELAE-----GTKINELMDELGLPNTRVNS 162

Query: 166 TARDMAILSWRIKTDFPQYMHY 187
                  +  +           
Sbjct: 163 RTAGREAIWKKYGWGHTTPREM 184


>gi|238796811|ref|ZP_04640316.1| Penicillin-binding protein ampH [Yersinia mollaretii ATCC 43969]
 gi|238719299|gb|EEQ11110.1| Penicillin-binding protein ampH [Yersinia mollaretii ATCC 43969]
          Length = 380

 Score = 36.1 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+     +    LT P
Sbjct: 81  PDSLIRIASITKLMTSEVMVKLADDGTVKLTDP 113


>gi|77407719|ref|ZP_00784474.1| protein of unknown function [Streptococcus agalactiae COH1]
 gi|77173718|gb|EAO76832.1| protein of unknown function [Streptococcus agalactiae COH1]
          Length = 428

 Score = 36.1 bits (81), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 53/222 (23%), Gaps = 16/222 (7%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
             +A    D     AS+ KL T Y     +K  K  L +      N +++P S      G
Sbjct: 216 QTVAGINIDRSMYSASIAKLATLYASQEQVKLGKLSLDSKFEYKDNVNQFPNSYDPSGSG 275

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                 +     + +     A             +V   N                H  +
Sbjct: 276 KLEKKADHKLYTVKELLEATAKESDNVATNMLGYYVN--NQYDSMFQTQVDTISGMHWDM 333

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +      ++      +     +  +      +  K      A             
Sbjct: 334 KKRQISPQAAGKMMEAIYYQNGDIVNYLSKTDFDNTRIPKNIPVKVAHKIGD-------- 385

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
              A  +   A+ +  +Q  I +I       +       +  
Sbjct: 386 ---AYDYKHDAAIVYAEQPFIMIIF---TDKSSYDDITKIAD 421


>gi|325694052|gb|EGD35970.1| peptidase family S11 [Streptococcus sanguinis SK150]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|315649054|ref|ZP_07902147.1| hypothetical protein PVOR_27759 [Paenibacillus vortex V453]
 gi|315275489|gb|EFU38844.1| hypothetical protein PVOR_27759 [Paenibacillus vortex V453]
          Length = 676

 Score = 36.1 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 21/83 (25%), Gaps = 15/83 (18%)

Query: 9   AMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAEN-------------YPDHPWNPAS 55
            +     +F             + ++    G V+                     +  AS
Sbjct: 63  LLTFADPLFADKMKKFNVAGSNFVVV--KDGKVLVSKGYGYADKKKQIPVDSQTVFQIAS 120

Query: 56  LTKLMTAYVVFSFLKEKKAMLTT 78
           ++K  TA      + + K  L  
Sbjct: 121 ISKTFTALAAMQLVDQGKIQLDH 143


>gi|228964786|ref|ZP_04125892.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar sotto str. T04001]
 gi|228794859|gb|EEM42359.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar sotto str. T04001]
          Length = 363

 Score = 36.1 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 13/42 (30%)

Query: 37 NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G V+     +     AS  K++ A      + E K     
Sbjct: 56 KNGEVLTSINENKKLPLASTAKIVIAVEFAKQVSEGKISRDE 97


>gi|325690135|gb|EGD32139.1| peptidase family S11 [Streptococcus sanguinis SK115]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|297192906|ref|ZP_06910304.1| penicillin binding protein [Streptomyces pristinaespiralis ATCC
          25486]
 gi|297151550|gb|EFH31228.1| penicillin binding protein [Streptomyces pristinaespiralis ATCC
          25486]
          Length = 528

 Score = 36.1 bits (81), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 19/75 (25%), Gaps = 17/75 (22%)

Query: 9  AMAMLSNIFPFLSIAETNKLPYY---TLLD--------------TNTGHVIAENYPDHPW 51
              LS   P  +      L       L D                TG  + +       
Sbjct: 21 LACTLSWSSPAGAGPSDTGLKGALDKVLADPRMDGGAVSVVVADAATGERLYQRDSGDRL 80

Query: 52 NPASLTKLMTAYVVF 66
           PAS TKL T+    
Sbjct: 81 MPASNTKLATSAAAM 95


>gi|312130821|ref|YP_003998161.1| beta-lactamase [Leadbetterella byssophila DSM 17132]
 gi|311907367|gb|ADQ17808.1| beta-lactamase [Leadbetterella byssophila DSM 17132]
          Length = 433

 Score = 36.1 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 39  GHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISK 84
           G     +  +  +N ASLTK +TA  V   + + +  L TP+    
Sbjct: 159 GKFYNNSNAESRFNVASLTKPITALAVLKLVDKGEWDLDTPLYTYW 204


>gi|228900377|ref|ZP_04064606.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
          4222]
 gi|228859264|gb|EEN03695.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis IBL
          4222]
          Length = 363

 Score = 36.1 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 13/42 (30%)

Query: 37 NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G V+     +     AS  K++ A      + E K     
Sbjct: 56 KNGEVLTSINENKKLPLASTAKIVIAVEFAKQVSEGKISRDE 97


>gi|55794120|gb|AAV65950.1| penicillinase Cad-1 [Carnobacterium divergens]
          Length = 304

 Score = 36.1 bits (81), Expect = 7.6,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 56/214 (26%), Gaps = 6/214 (2%)

Query: 34  LDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN 93
           LDT T  V      D  +  AS  K +   +V +     +  L   I I K         
Sbjct: 66  LDTETNKV-VAYNEDQRFAFASTYKALAGGLVLNESSWDE--LNQTIMIKKEDLVTYSPI 122

Query: 94  STFKKGSTMTLDNALKLLIVKSANDIAVAIAE--SLCKTEKKFVQHMNNTSKNLGLSATH 151
           +       M L   +   I  S N     + +     K  +  +  + + + +     T 
Sbjct: 123 TEKYVDIGMPLKELISAAIQYSDNTAGNFLFKQLGGPKGFQTKLAELGDYTTDSSRFETE 182

Query: 152 FMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
              A         T       L                 K   I+         A     
Sbjct: 183 LNEATPGDIRDTSTPKEIALDLKKLAIDHKLPTDKLEFYKKQLIENTTGSKLIRAGIPSD 242

Query: 212 GADGMKTGF-TCASGFNIVASAIQGDQSLIAVIL 244
              G K+G  +  +  +I        + ++ VI 
Sbjct: 243 VIVGDKSGAGSYGTRNDIAVLYPPNRKPIVLVIF 276


>gi|319953544|ref|YP_004164811.1| hypothetical protein Celal_2016 [Cellulophaga algicola DSM 14237]
 gi|319422204|gb|ADV49313.1| hypothetical protein Celal_2016 [Cellulophaga algicola DSM 14237]
          Length = 514

 Score = 36.1 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 55/174 (31%), Gaps = 3/174 (1%)

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYT-TARDMAILSWRIKTDFPQYMHYFQIKGLEIK 196
           M +       S    + A G+    H      +   L      +         +K  +I+
Sbjct: 338 MADVLVQSMNSGFDAVIAWGLDDAMHTNGDTGEKNQLKKWGMWNILGKELTGDVKEEDIR 397

Query: 197 GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVS 256
              Y  +            +KT     +   +VA     +    +V+  +    T    +
Sbjct: 398 PWFYTWSILTRYFTNDMKIVKTTGLDINKVRMVAGWSASNDVTFSVVNNSDKEATFYLET 457

Query: 257 ASLLSMGFYNKTDRKKINYIIKDFYQQNLSNEV--PNISEEVCTTQKEIINYNT 308
            +L +  F   +  +    +  + + + + N +   + +E++    K ++ Y T
Sbjct: 458 ENLKNKSFKKYSYSENNRPVDSNNFPKAVQNNLSFTSGTEQITIPAKSVLLYTT 511


>gi|313890785|ref|ZP_07824410.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313120886|gb|EFR44000.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 348

 Score = 36.1 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 42/177 (23%), Gaps = 7/177 (3%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  +G          P    S  KL    +V   +++ K  L     I+    EY   + 
Sbjct: 113 DLESGET-FSMNDRQPMTAGSTYKLPLNMLVVDEVEKGKYNLEQRFDITDTTYEYDREHM 171

Query: 95  TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMN 154
            +       +  +         ++                +       +  G S +    
Sbjct: 172 AYVNQFAGAMSISEMQEYSLLYSE---NTPAYALADRLGGMDKAYKKFRRYGKSKSEIKT 228

Query: 155 AHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL 211
                + G+ TT      +   +     +Y            G  Y      +  + 
Sbjct: 229 IL---EKGNKTTTDYYIQVLDYLWKHKNKYKDILYYIRESFPGDYYKTYLPDITIYQ 282


>gi|229512894|ref|ZP_04402361.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TMA 21]
 gi|229350143|gb|EEO15096.1| D-alanyl-D-alanine carboxypeptidase [Vibrio cholerae TMA 21]
          Length = 487

 Score = 36.1 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 44/190 (23%), Gaps = 13/190 (6%)

Query: 5   LVIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAY 63
            +I +           +        Y  L+ D        E      + PAS  K++TA 
Sbjct: 22  FLIASPIYAQTPLTAATTKLPQGARYSLLIEDAALQQNTLELNTHLYYPPASTQKILTAL 81

Query: 64  VVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAI 123
                    K  L        +             G        L  L+          I
Sbjct: 82  AA-------KLELGDEFRFHTDLMHSGQDWIIRFSGDPTLTTADLTTLLKAMKAQSGGRI 134

Query: 124 ---AESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTD 180
                        + + +      LG+  +   +A  +   G+   A        + +  
Sbjct: 135 EGDLWLDNSVFSGYERAVGWPWDILGVCYSAPASAINLD--GNCIQASIYTEPQGKTRVY 192

Query: 181 FPQYMHYFQI 190
            P++      
Sbjct: 193 VPEHYPVHAQ 202


>gi|228938908|ref|ZP_04101508.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|228971790|ref|ZP_04132411.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228978398|ref|ZP_04138775.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          Bt407]
 gi|228781415|gb|EEM29616.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          Bt407]
 gi|228787880|gb|EEM35838.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228820757|gb|EEM66782.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|326939409|gb|AEA15305.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar chinensis CT-43]
          Length = 363

 Score = 36.1 bits (81), Expect = 7.7,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 13/42 (30%)

Query: 37 NTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
            G ++     +     AS  K++ A      + E K     
Sbjct: 56 KNGEILTSINENKKLPLASTAKIVIAVEFAKQVSEGKISRDE 97


>gi|270300475|gb|ACZ69281.1| Beta-lactamase [Staphylococcus aureus]
          Length = 281

 Score = 36.1 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAE----TNKLPY-----YTLLDTNTGHVIAENYPDHPW 51
           M++ + +IA+A++ +     S         +  Y        LDT +G    +   D  +
Sbjct: 1   MKKLIFLIAIALVLSACNSNSTHAKKLNDLEKKYNAHIGVYALDTKSGKE-VKFNSDKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   I I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQIPYN--KLNKKIHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH 156
           +  S N     I + +       ++ +    K LG   T+ +   
Sbjct: 118 MTYSDNTANNKIIKEI-----GGIKKVKQRLKELGDKVTNPVRYE 157


>gi|22298918|ref|NP_682165.1| D-alanyl-D-alanine carboxypeptidase [Thermosynechococcus
          elongatus BP-1]
 gi|22295099|dbj|BAC08927.1| D-alanyl-D-alanine carboxypeptidase [Thermosynechococcus
          elongatus BP-1]
          Length = 465

 Score = 36.1 bits (81), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 7/57 (12%)

Query: 19 FLSIAETNKLPYY------TLL-DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
            +IA+  + P +       ++ D  +G V+  +  +  +  AS  KL T      +
Sbjct: 31 ARAIAQEIQNPQWQRGQWGIVVEDLRSGEVLYNHQGEKLFLVASNVKLTTVAAALDY 87


>gi|300777713|ref|ZP_07087571.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Chryseobacterium gleum ATCC 35910]
 gi|300503223|gb|EFK34363.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Chryseobacterium gleum ATCC 35910]
          Length = 457

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 14/80 (17%)

Query: 1  MRQFLVIIAMAMLSNIFPFLSIAETNKLP-------------YYTLLDTNTGHVIAENYP 47
          M++ L ++ +++       ++                      + + D   G++I E   
Sbjct: 1  MKKTLAVLTLSVQIVAAQNIAQKLDKATKDLMDSSGAISSGLSFYVSD-ENGNLIYEYQG 59

Query: 48 DHPWNPASLTKLMTAYVVFS 67
          +   + AS  K+ TA     
Sbjct: 60 NKGLSTASTQKIFTAGAALE 79


>gi|332366017|gb|EGJ43773.1| peptidase family S11 [Streptococcus sanguinis SK1059]
          Length = 279

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 46  DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 104

Query: 95  TF 96
            +
Sbjct: 105 NY 106


>gi|332363479|gb|EGJ41262.1| peptidase family S11 [Streptococcus sanguinis SK355]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|328945518|gb|EGG39669.1| peptidase family S11 [Streptococcus sanguinis SK1087]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|324995346|gb|EGC27258.1| peptidase family S11 [Streptococcus sanguinis SK678]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|324993343|gb|EGC25263.1| peptidase family S11 [Streptococcus sanguinis SK405]
 gi|327461616|gb|EGF07947.1| peptidase family S11 [Streptococcus sanguinis SK1]
 gi|327473336|gb|EGF18756.1| peptidase family S11 [Streptococcus sanguinis SK408]
 gi|327489474|gb|EGF21267.1| peptidase family S11 [Streptococcus sanguinis SK1058]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|324990605|gb|EGC22541.1| peptidase family S11 [Streptococcus sanguinis SK353]
          Length = 359

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 126 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 184

Query: 95  TF 96
            +
Sbjct: 185 NY 186


>gi|323352676|ref|ZP_08087646.1| peptidase family S11 [Streptococcus sanguinis VMC66]
 gi|322121712|gb|EFX93458.1| peptidase family S11 [Streptococcus sanguinis VMC66]
 gi|327458702|gb|EGF05050.1| peptidase family S11 [Streptococcus sanguinis SK1057]
 gi|332361701|gb|EGJ39505.1| peptidase family S11 [Streptococcus sanguinis SK1056]
          Length = 386

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|295822239|gb|ADG36773.1| extended-spectrum class A beta-lactamase [Rahnella sp. 91-Salad]
 gi|295822243|gb|ADG36775.1| extended-spectrum class A beta-lactamase [Rahnella genomosp. 2]
          Length = 218

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 55/203 (27%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + KK +LT  + + K+        +       MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKESEVKKNLLTQHVALKKSDLVNYNPITEKHLNEGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +       +  S N     + E L    K              L  T       +     
Sbjct: 65  IGELAAAALQYSDNTAMNKLIEHLGGPHKVTDYARTLGDNTFRLDRTEPTLNTAIPGDER 124

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFT 221
            TT+     LS +  T         + + +E                      G KTG  
Sbjct: 125 DTTSPRAMALSLQHATLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWIVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  L+ V 
Sbjct: 185 DYGTTNDIAVIWPENKAPLVLVT 207


>gi|229069344|ref|ZP_04202634.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
 gi|228713831|gb|EEL65716.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus F65185]
          Length = 363

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G V+     +     AS+ K++ A      + E K     
Sbjct: 57 NGEVLTSINENKKLPLASMAKIIIAVEFAKQVSEGKINRDE 97


>gi|146299863|ref|YP_001194454.1| beta-lactamase [Flavobacterium johnsoniae UW101]
 gi|146154281|gb|ABQ05135.1| beta-lactamase [Flavobacterium johnsoniae UW101]
          Length = 347

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 20/34 (58%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             +  ++ AS+TK++TA +VF  ++  K  L T 
Sbjct: 67  NKNTEYHIASVTKMVTAILVFKLIENDKLKLDTK 100


>gi|89890708|ref|ZP_01202217.1| glycoside hydrolase [Flavobacteria bacterium BBFL7]
 gi|89516853|gb|EAS19511.1| glycoside hydrolase [Flavobacteria bacterium BBFL7]
          Length = 983

 Score = 36.1 bits (81), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 15/61 (24%)

Query: 32  TLLDTNTGHVIAENY------------PDHPWN-PASLTKLM-TAYVVFSFLKEKKAMLT 77
            L+    G V+ +               D      ASLTK+M T  +V    +E    L 
Sbjct: 619 ILI-ARKGKVVYQKNFGYHTYSKEKPVEDQDVYDIASLTKIMGTLPLVMELEEEGVISLE 677

Query: 78  T 78
            
Sbjct: 678 D 678


>gi|123441730|ref|YP_001005714.1| beta-lactam binding protein AmpH [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332162340|ref|YP_004298917.1| beta-lactam binding protein AmpH [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122088691|emb|CAL11494.1| putative penicillin-binding protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|325666570|gb|ADZ43214.1| beta-lactam binding protein AmpH [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 380

 Score = 36.1 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+    ++    LT P
Sbjct: 81  PDSLIRIASITKLMTSEVMVKLAEDGTVKLTDP 113


>gi|119512333|ref|ZP_01631418.1| hypothetical protein N9414_13712 [Nodularia spumigena CCY9414]
 gi|119462984|gb|EAW43936.1| hypothetical protein N9414_13712 [Nodularia spumigena CCY9414]
          Length = 441

 Score = 36.1 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 3/53 (5%)

Query: 16  IFPFLSIAETNKLPYYTLLDTNTGHVIAE-NYPDHPWNPASLTKLMTAYVVFS 67
           +     +AE         +   +G ++   +    P   ASLTK+ T+ V   
Sbjct: 59  LISSKLVAENLAESQGIWM--QSGPMLMANHQGTTPLPAASLTKIATSLVALK 109


>gi|325688282|gb|EGD30301.1| peptidase family S11 [Streptococcus sanguinis SK72]
          Length = 386

 Score = 36.1 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 153 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 211

Query: 95  TF 96
            +
Sbjct: 212 NY 213


>gi|311280737|ref|YP_003942968.1| beta-lactamase [Enterobacter cloacae SCF1]
 gi|308749932|gb|ADO49684.1| beta-lactamase [Enterobacter cloacae SCF1]
          Length = 385

 Score = 36.1 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           D     ASLTKLMT+ ++   L +    L  P
Sbjct: 80  DSVIRIASLTKLMTSEMLVKLLDQGVVKLNDP 111


>gi|291191863|gb|ADD82978.1| class A extended-spectrum beta-lactamase CSP-1 [Capnocytophaga
           sputigena]
          Length = 305

 Score = 36.1 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/90 (10%), Positives = 24/90 (26%), Gaps = 9/90 (10%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNK----LPYYTL----LDTNTGHVIAENYPDHPWN 52
           M+++     + +    F   ++              +    +++  G        +    
Sbjct: 13  MKKYFSFCLLGIFIFCFSQQNLKRDITKIIQGKNALVAVSVMNSK-GKTEVNINGNKKVP 71

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITI 82
             S+ K   A  V   +      L   I +
Sbjct: 72  MLSVFKFHIALAVLDLVDRGILDLEQNIFV 101


>gi|163787063|ref|ZP_02181510.1| Beta-lactamase [Flavobacteriales bacterium ALC-1]
 gi|159876951|gb|EDP71008.1| Beta-lactamase [Flavobacteriales bacterium ALC-1]
          Length = 703

 Score = 36.1 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 28/103 (27%)

Query: 1   MRQFLVIIAMAMLSNIFPF---LSIAETNKLPY---------YTLLDTNTGHVIAEN--- 45
           M++ + ++ + +  + F       I                   + D   G +I E    
Sbjct: 1   MKKIITLLTLFISVSSFAQDKIQIIDSIVNSKIEGNDPGLMIGIVKD---GTIIYEKYRG 57

Query: 46  ----------YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
                           N AS+ K  TA ++     + +  L  
Sbjct: 58  LAYLPYQIKMDEKTKSNIASVAKQYTALMILDLALKGQLSLED 100


>gi|229157120|ref|ZP_04285200.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
 gi|228626184|gb|EEK82931.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus ATCC 4342]
          Length = 359

 Score = 36.1 bits (81), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 55/214 (25%), Gaps = 15/214 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      V+    P+ 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLV-KRNDKVVYSVNPNV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS  KL+ A      + E K    +   +S N        +T             K
Sbjct: 60  VLPVASTMKLIVALEFTKQVTEGKI--DSSSFVSINDVNRYYVPNTDGGAQDRWQRYLEK 117

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
              +         +A+ + K               L     +   +  +  H        
Sbjct: 118 TGKITEGAISLEEVAKGMVKFSSNANAEYLMEVLGLDNINRNL-QSLSLPAHQPLFPIVS 176

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
              +   +  +     +  + K  E+  ++Y   
Sbjct: 177 SLYIPGYLHKELHVPKYKIEKKLKEMSQEQYRQY 210


>gi|227540040|ref|ZP_03970089.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240115|gb|EEI90130.1| beta-lactamase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 300

 Score = 36.1 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 37/142 (26%), Gaps = 16/142 (11%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLD 105
             D  +  AS+ K+     VF+ + + +        I + +  Y  S        ++  D
Sbjct: 59  NADSIFPTASIIKVPILAGVFNKIGKGELKYNDK-FIYRQSRAYGGSGLMQFFKDSVETD 117

Query: 106 NALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYT 165
            +    ++   +D   +I         K  + M+                 G+      +
Sbjct: 118 LSTMAALMIGYSDNVTSIWCQELAEGTKINELMDE---------------LGLPNTRVNS 162

Query: 166 TARDMAILSWRIKTDFPQYMHY 187
                  +  +           
Sbjct: 163 RTAGREAIWKKYGWGHTTPREM 184


>gi|217960943|ref|YP_002339511.1| hypothetical protein BCAH187_A3568 [Bacillus cereus AH187]
 gi|222097004|ref|YP_002531061.1| d-alanyl-d-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|229140154|ref|ZP_04268712.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
 gi|217064601|gb|ACJ78851.1| hypothetical protein BCAH187_A3568 [Bacillus cereus AH187]
 gi|221241062|gb|ACM13772.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Q1]
 gi|228643240|gb|EEK99513.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus BDRD-ST26]
          Length = 359

 Score = 36.1 bits (81), Expect = 8.2,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 55/214 (25%), Gaps = 15/214 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      V+    P+ 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLV-KRNDKVVYSVNPNV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS  KL+ A      + E K    +   +S N        +T             K
Sbjct: 60  VLPVASTMKLIVALEFTKQVTEGKI--DSSSFVSINDVNRYYVPNTDGGAQDRWQRYLEK 117

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
              +         +A+ + K               L     +   +  +  H        
Sbjct: 118 TGKITEGAISLEEVAKGMVKFSSNANAEYLMEVLGLDNINRNL-QSLSLPAHQPLFPIVS 176

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
              +   +  +     +  + K  E+  ++Y   
Sbjct: 177 SLYIPGYLHKELHVPKYKIEKKLKEMSQEQYRQY 210


>gi|306834612|ref|ZP_07467724.1| beta-lactamase [Streptococcus bovis ATCC 700338]
 gi|304423248|gb|EFM26402.1| beta-lactamase [Streptococcus bovis ATCC 700338]
          Length = 428

 Score = 36.1 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 12/34 (35%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
             D     AS+ KL T Y V   L++        
Sbjct: 222 NADTVMYSASIAKLATLYYVEGKLQDGTISANDT 255


>gi|74316119|ref|YP_313859.1| D-alanyl-D-alanine carboxypeptidase PBP3 [Thiobacillus
           denitrificans ATCC 25259]
 gi|74055614|gb|AAZ96054.1| peptidase S13, D-Ala-D-Ala carboxypeptidase C [Thiobacillus
           denitrificans ATCC 25259]
          Length = 488

 Score = 36.1 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 31  YTLL---DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
             ++   D      +  +  +   NPAS+ KL+T++     L       T   
Sbjct: 56  AVVVQKLDAE--QPLLSHNAEAALNPASVMKLVTSFAALDQLGPGYRWTTELW 106


>gi|332362765|gb|EGJ40561.1| peptidase family S11 [Streptococcus sanguinis SK49]
          Length = 359

 Score = 36.1 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 35  DTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNS 94
           D  TG          P    S  KL    +V   +   K  +     I+    EY   + 
Sbjct: 126 DLTTGKT-FAMNDTQPMTAGSTYKLPLNMLVVDEVAAGKLSMDERFDITNTNYEYRGEHD 184

Query: 95  TF 96
            +
Sbjct: 185 NY 186


>gi|261493509|ref|ZP_05990031.1| cell division protein FtsI [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495862|ref|ZP_05992294.1| cell division protein FtsI [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308489|gb|EEY09760.1| cell division protein FtsI [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310842|gb|EEY12023.1| cell division protein FtsI [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 686

 Score = 36.1 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 40/172 (23%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
                  +     L+D  TG ++A        P+                  + P S  K
Sbjct: 353 AVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 412

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
             T                  +  ++       +        ++TL   L+       + 
Sbjct: 413 PFTVLTALQNG----VTYRDEVIGTRPFVVNGHTIKDVAPRDSLTLTGILQKSSNIGVSK 468

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T +   
Sbjct: 469 LALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRWADIERATLSYGY 520


>gi|295822213|gb|ADG36760.1| extended-spectrum class A beta-lactamase [Rahnella sp. 381-Salad]
          Length = 218

 Score = 36.1 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 55/203 (27%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + KK +LT  + + K+        +       MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKESEVKKNLLTQHVGLKKSDLVNYNPITEKHLKEGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +       +  S N     + E L    K              L  T       +     
Sbjct: 65  IGELAAAALQYSDNTAMNKLIEHLGGPHKVTDYARTLGDNTFRLDRTEPTLNTAIPGDER 124

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFT 221
            TT+     LS +  T         + + +E                      G KTG  
Sbjct: 125 DTTSPRAMALSLQHATLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWIVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  L+ V 
Sbjct: 185 DYGTTNDIAVIWPENKAPLVLVT 207


>gi|295822173|gb|ADG36740.1| extended-spectrum class A beta-lactamase [Rahnella sp. 296-Salad]
 gi|295822179|gb|ADG36743.1| extended-spectrum class A beta-lactamase [Rahnella sp. 311-Carrot]
 gi|295822183|gb|ADG36745.1| extended-spectrum class A beta-lactamase [Rahnella sp. 326-Celery]
          Length = 218

 Score = 36.1 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   +++ K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKHSETQTELLNRRVSLKKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|238761961|ref|ZP_04622934.1| Penicillin-binding protein ampH [Yersinia kristensenii ATCC 33638]
 gi|238699689|gb|EEP92433.1| Penicillin-binding protein ampH [Yersinia kristensenii ATCC 33638]
          Length = 382

 Score = 36.1 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+    ++    LT P
Sbjct: 83  PDSLIRIASITKLMTSEVMVKLAEDGTVKLTDP 115


>gi|254362467|ref|ZP_04978575.1| cell division protein FtsI [Mannheimia haemolytica PHL213]
 gi|153094059|gb|EDN74971.1| cell division protein FtsI [Mannheimia haemolytica PHL213]
          Length = 686

 Score = 36.1 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 40/172 (23%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
                  +     L+D  TG ++A        P+                  + P S  K
Sbjct: 353 AVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFKPELMRNRAITDTFEPGSTVK 412

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
             T                  +  ++       +        ++TL   L+       + 
Sbjct: 413 PFTVLTALQNG----VTYRDEVIGTRPFVVNGHTIKDVAPRDSLTLTGILQKSSNIGVSK 468

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T +   
Sbjct: 469 LALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRWADIERATLSYGY 520


>gi|54297538|ref|YP_123907.1| hypothetical protein lpp1588 [Legionella pneumophila str. Paris]
 gi|53751323|emb|CAH12739.1| hypothetical protein lpp1588 [Legionella pneumophila str. Paris]
          Length = 266

 Score = 36.1 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 49/203 (24%), Gaps = 11/203 (5%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVI--AENYPDHPWNPASLTK 58
           M++ ++ +   +L  +    +                   V+    N  D  ++PAS  K
Sbjct: 1   MKKIIIFLYTGLLFCV-STWAQDTCFLAK-------ENQTVLKREGNDCDQRYSPASTFK 52

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
           +  + + F     K   L       K    Y       +   T   D+ +      +   
Sbjct: 53  IALSLMGFDSGILKD-ELHPEWPYKKEYELYLNVWKYPQNPHTWIRDSCVWYSQALTRQL 111

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIK 178
                   +            +  +N GL+     ++  +         + +      + 
Sbjct: 112 GMKRFKGYVDAFHYGNQDVSGDKGQNNGLTHAWLSSSLSISPTEQIQFLQKIIYKKLPVS 171

Query: 179 TDFPQYMHYFQIKGLEIKGKKYP 201
                             G K  
Sbjct: 172 QKAYTMTKNIMYIQELPGGWKLY 194


>gi|311334636|dbj|BAJ24845.1| S12 family peptidase [Streptomyces sp. 82F2]
          Length = 382

 Score = 36.1 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           E   D  +   S+TK  TA V+     E +  L  P
Sbjct: 75  ERGGDDRYRVGSITKTFTATVLLQLQAEGRIDLDDP 110


>gi|146299215|ref|YP_001193806.1| peptidoglycan glycosyltransferase [Flavobacterium johnsoniae UW101]
 gi|146153633|gb|ABQ04487.1| peptidoglycan glycosyltransferase [Flavobacterium johnsoniae UW101]
          Length = 657

 Score = 36.1 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 34/145 (23%), Gaps = 4/145 (2%)

Query: 7   IIAMAMLSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVF 66
           I+A+    +  P + +       Y  L   +    + +      + P S  K++T  V  
Sbjct: 260 ILALVTAPSYDPGILVGRQKSKNYTLLYHDSIAKPLYDRGLLAEYPPGSPFKILTGLVAL 319

Query: 67  SFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAES 126
                      T        S                L N +            +     
Sbjct: 320 QE---GVINEQTTFMCHHGFSYGGGRFMKCHGFGPHQLHNGIYNSCNTYFGQAYMLTINK 376

Query: 127 LCKTEKKFVQHMNNTSKNLGLSATH 151
                +      ++  K+ GL    
Sbjct: 377 YKDPGQAV-DVWSSHVKSFGLGQFM 400


>gi|327490348|gb|EGF22135.1| beta-lactamase [Streptococcus sanguinis SK1058]
          Length = 427

 Score = 36.1 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|30263498|ref|NP_845875.1| hypothetical protein BA_3605 [Bacillus anthracis str. Ames]
 gi|47778183|ref|YP_020240.2| hypothetical protein GBAA_3605 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|228916179|ref|ZP_04079749.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228934824|ref|ZP_04097655.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229092514|ref|ZP_04223670.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|30258133|gb|AAP27361.1| hypothetical protein BA_3605 [Bacillus anthracis str. Ames]
 gi|47551888|gb|AAT32715.2| hypothetical protein GBAA_3605 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|228690801|gb|EEL44576.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus Rock3-42]
 gi|228824724|gb|EEM70525.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228843377|gb|EEM88455.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 359

 Score = 36.1 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 17/213 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      V+    P+ 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLV-KRNDKVVYSVNPNV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKE-KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
               AS  KL    V   + K+  +  + +   +S N        +T             
Sbjct: 60  VLPVASTMKL---IVALEYTKQVTEGKIDSSRFVSINDVNRYYVPNTDGGAQDRWQSYLE 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K   +         +A  + +               L     +   +  +  H       
Sbjct: 117 KKGKITEGAVSLEEVARGMVRFSSNANAEYLMEVLGLDNINRNL-QSLSLPAHQPIFPIV 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
               +   +  +     +  + +  E+  ++Y 
Sbjct: 176 SSLYIPGYLHKELHVPKYKIEKRLKEMSQEQYR 208


>gi|223041549|ref|ZP_03611750.1| peptidoglycan synthetase FtsI [Actinobacillus minor 202]
 gi|223017644|gb|EEF16054.1| peptidoglycan synthetase FtsI [Actinobacillus minor 202]
          Length = 681

 Score = 36.1 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 42/172 (24%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
                  +     L+D  TG V+A        P+                  + P S  K
Sbjct: 362 AVKENDAESGTAVLVDVTTGEVLAMANAPSFNPNKRDTFKPELMRNRAITDTFEPGSTVK 421

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     I  ++  +    +        +++L   L+       + 
Sbjct: 422 PLVVLTALQNG----ATYRDEIINTRPFTVNGHTIKDVSPRESLSLTGILQKSSNVGVSR 477

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 478 LALRMPSTALVDTYSKVGFGKDTGLGLGEQRGTNGDRKRWADIERATMAYGY 529


>gi|67973196|gb|AAY84135.1| beta-lactamase [Staphylococcus aureus]
          Length = 160

 Score = 36.1 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +++IA+A++ +     S             N       LDT +G    +   D  +
Sbjct: 1   MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALDTKSGKE-VKFNADKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   + I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAE 125
           +  S N     I  
Sbjct: 118 MKYSDNTANNKIIN 131


>gi|332365104|gb|EGJ42869.1| beta-lactamase [Streptococcus sanguinis SK355]
          Length = 427

 Score = 35.7 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 56/209 (26%), Gaps = 4/209 (1%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +TG   A    D     AS+TKL   Y V   L +KK  L          +++  +   
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLNQKKISLDQKFKYVGAVNDFAGAYEP 270

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT---HF 152
              GS     +  +  +    N +A             +  + ++ +    ++      +
Sbjct: 271 EGSGSIEKSADDKEYSVHDLINRVAKESDNVAHNILGYYATNQSDKNFQQTINKIAGKKW 330

Query: 153 MNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLG 212
                           +       +  D     +Y   +  +    K  +       F  
Sbjct: 331 DVEERQASSRMAGNVLEAIYEQNGMIIDALSQTNYDNQRISKNIDAKVAHKIGDAYDFKH 390

Query: 213 ADGMKTGFTCASGFNIVASAIQGDQSLIA 241
              +    +         +A   + S IA
Sbjct: 391 DAAIVYADSPFIIVIFTNNANYDNISQIA 419


>gi|313889519|ref|ZP_07823165.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313122131|gb|EFR45224.1| conserved hypothetical protein [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 428

 Score = 35.7 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/204 (9%), Positives = 48/204 (23%), Gaps = 13/204 (6%)

Query: 46  YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSN--------STFK 97
             D     AS+ KL T Y V + L   +     P+      + +  +             
Sbjct: 222 NADKMMYSASIAKLATLYYVQNQLNTGQIKPDKPLRYIDQVNHFDGAYGPSGSGHIDKEA 281

Query: 98  KGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHG 157
                 +D+ LK +   S N     +   +               +   +S   +     
Sbjct: 282 DNKEYRVDSLLKAIAQHSDNVATNILGYYIANKYDH-----KFYLQVNAISGIDWNMESR 336

Query: 158 VVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMK 217
           ++         +           +     +   +  +       +       +     + 
Sbjct: 337 MISSHAAANIMESIYYQKGEIISYLSQTDFDDTRISKNIQVPVAHKIGDAYDYKHDVAIV 396

Query: 218 TGFTCASGFNIVASAIQGDQSLIA 241
            G +          +   D + IA
Sbjct: 397 YGNSPFILSIFTDKSSYDDITNIA 420


>gi|238794256|ref|ZP_04637870.1| Penicillin-binding protein ampH [Yersinia intermedia ATCC 29909]
 gi|238726438|gb|EEQ17978.1| Penicillin-binding protein ampH [Yersinia intermedia ATCC 29909]
          Length = 380

 Score = 35.7 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 47  PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
           PD     AS+TKLMT+ V+     +    LT P
Sbjct: 81  PDSLIRIASITKLMTSEVMVKLADDGTVKLTDP 113


>gi|206975500|ref|ZP_03236413.1| hypothetical protein BCH308197_3492 [Bacillus cereus H3081.97]
 gi|206746402|gb|EDZ57796.1| hypothetical protein BCH308197_3492 [Bacillus cereus H3081.97]
 gi|324327447|gb|ADY22707.1| hypothetical protein YBT020_17385 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 369

 Score = 35.7 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 44/174 (25%), Gaps = 4/174 (2%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
              L+      V+    P+     AS  KL+ A      + E K    +   +S N    
Sbjct: 51  SALLV-KRNDKVVYSVNPNVVLPVASTMKLIVALEFTKQVTEGKI--DSSSFVSINDVNR 107

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSA 149
               +T             K   +         +A+ + K               L    
Sbjct: 108 YYVPNTDGGAQDRWQRYLEKTGKITEGAISLEEVAKGMVKFSSNANAEYLMEVLGLDNIN 167

Query: 150 THFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
            +   +  +  H           +   +  +     +  + K  E+  ++Y   
Sbjct: 168 RNL-QSLSLPAHQPLFPIVSSLYIPGYLHKELHVPKYKIEKKLKEMSQEQYRQY 220


>gi|77411316|ref|ZP_00787665.1| protein of unknown function [Streptococcus agalactiae CJB111]
 gi|77162652|gb|EAO73614.1| protein of unknown function [Streptococcus agalactiae CJB111]
          Length = 428

 Score = 35.7 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 54/222 (24%), Gaps = 16/222 (7%)

Query: 40  HVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKG 99
             +A    D     AS+ KL T Y     +K  K  L +      N +++P S +    G
Sbjct: 216 QTVAGINIDRSMYSASIAKLATLYASQEQVKLGKLSLDSKFEYKDNVNQFPNSYAPSGSG 275

Query: 100 STMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV 159
                 +     + +     A             +V   N                H  +
Sbjct: 276 KLEKKADHKLYTVKELLEATAKESDNVATNMLGYYVN--NQYDSMFQTQVDTISGMHWDM 333

Query: 160 QHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTG 219
           +    +      ++      +     +  +      +  K      A             
Sbjct: 334 KKRQISPQAAGKMMEAIYYQNGDIVNYLSKTDFDNTRIPKNIPVKVAHKIGD-------- 385

Query: 220 FTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
              A  +   A+ +  +Q  I +I       +       +  
Sbjct: 386 ---AYDYKHDAAIVYAEQPFIMIIF---TDKSSYDDITKIAD 421


>gi|297580758|ref|ZP_06942684.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio cholerae RC385]
 gi|297535174|gb|EFH74009.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio cholerae RC385]
          Length = 487

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +I +           +        Y  L+ D        E      + PAS  K++TA 
Sbjct: 22 FLIASPIYAQTPLTAATTKLPQGARYSLLIEDAALQQNTLELNTHLYYPPASTQKILTAL 81

Query: 64 VV 65
            
Sbjct: 82 AA 83


>gi|228986635|ref|ZP_04146766.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773120|gb|EEM21555.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 359

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 55/214 (25%), Gaps = 15/214 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      V+    P+ 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLV-KRNDKVVYSVNPNV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALK 109
               AS  KL+ A      + E K    +   +S N        +T             K
Sbjct: 60  VLPVASTMKLIVALEFTKQVTEGKI--DSSSFVSINDVNRYYVPNTDGGAQDRWQRYLEK 117

Query: 110 LLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARD 169
              +         +A+ + K               L     +   +  +  H        
Sbjct: 118 AGKITEGAISLEEVAKGMVKFSSNANAEYLMEVLGLDNINRNL-QSLSLPAHQPLFPIVS 176

Query: 170 MAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
              +   +  +     +  + K  E+  ++Y   
Sbjct: 177 SLYIPGYLHKELHVPKYKIEKKLKEMSQEQYRQY 210


>gi|153830954|ref|ZP_01983621.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio cholerae 623-39]
 gi|148873567|gb|EDL71702.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio cholerae 623-39]
          Length = 487

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +I +           +        Y  L+ D        E      + PAS  K++TA 
Sbjct: 22 FLIASPIYAQTPLTAATTKLPQGARYSLLIEDAALQQNTLELNTHLYYPPASTQKILTAL 81

Query: 64 VV 65
            
Sbjct: 82 AA 83


>gi|153217143|ref|ZP_01950907.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio cholerae 1587]
 gi|124113836|gb|EAY32656.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Vibrio cholerae 1587]
          Length = 487

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 18/62 (29%), Gaps = 1/62 (1%)

Query: 5  LVIIAMAMLSNIFPFLSIAETNKLPYYTLL-DTNTGHVIAENYPDHPWNPASLTKLMTAY 63
           +I +           +        Y  L+ D        E      + PAS  K++TA 
Sbjct: 22 FLIASPIYAQTPLTAATTKLPQGARYSLLIEDAALQQNTLELNTHLYYPPASTQKILTAL 81

Query: 64 VV 65
            
Sbjct: 82 AA 83


>gi|92115047|ref|YP_574975.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Chromohalobacter salexigens DSM 3043]
 gi|91798137|gb|ABE60276.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Chromohalobacter salexigens DSM 3043]
          Length = 492

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 3/55 (5%)

Query: 13 LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFS 67
           SN+                L    +G  +    P    +PAS+TKL TA     
Sbjct: 39 FSNLATLADKGFVIGAQAQLL---GSGENLGSIQPTRRLSPASVTKLYTAAASLD 90


>gi|67973132|gb|AAY84093.1| beta-lactamase [Staphylococcus epidermidis]
          Length = 178

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +++IA+A++ +     S             N       LDT +G    +   D  +
Sbjct: 1   MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALDTKSGKE-VKFNADKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   + I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAE 125
           +  S N     I  
Sbjct: 118 MKYSDNTANNKIIN 131


>gi|297568514|ref|YP_003689858.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Desulfurivibrio alkaliphilus AHT2]
 gi|296924429|gb|ADH85239.1| D-alanyl-D-alanine
          carboxypeptidase/D-alanyl-D-alanine-endopeptidase
          [Desulfurivibrio alkaliphilus AHT2]
          Length = 405

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 18 PFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSF 68
              +  +       LL +  G ++  +  +    PAS  K+ T  +    
Sbjct: 20 AAAGLPPSVFSDGGYLL-SKDGRLLLAHNHEQALVPASTWKIATGLMALEQ 69


>gi|167589614|ref|ZP_02382002.1| Beta-lactamase [Burkholderia ubonensis Bu]
          Length = 270

 Score = 35.7 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 52/231 (22%), Gaps = 25/231 (10%)

Query: 32  TLLDTNTGHVIAENYP-DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
            + D  TGHV+            AS  K+  + + +     K     TP    ++     
Sbjct: 30  IVADAATGHVLVRQGECATRVTSASTFKVAISLMGYDAGFLK--DEHTPTLPYRDGYPDW 87

Query: 91  PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT 150
              +  +                +                           +   G    
Sbjct: 88  GGAAWREPTDPARWMRISIFWYSQQVAQAI-------------GQTRFQQYTTAFGYGNA 134

Query: 151 HFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF 210
              +  G +       A     +S   + DF + +    +                    
Sbjct: 135 DVTSNEGELNGVMGAWANGSLQISPLEQIDFMRKIVNRTLPVSAHAYDMTARLMRLDAQP 194

Query: 211 LGAD-GMKTGFTCASGFN--------IVASAIQGDQSLIAVILGALDRNTR 252
            G     KTG                 V  A +G ++L+   L   D+  R
Sbjct: 195 DGWTVHGKTGTGSPGAQYDAAHAYGWFVGWATKGPRTLVFANLIQDDKPQR 245


>gi|328945184|gb|EGG39339.1| beta-lactamase [Streptococcus sanguinis SK1087]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|322513877|ref|ZP_08066956.1| cell division protein FtsI/penicillin-binding protein
           [Actinobacillus ureae ATCC 25976]
 gi|322120276|gb|EFX92223.1| cell division protein FtsI/penicillin-binding protein
           [Actinobacillus ureae ATCC 25976]
          Length = 686

 Score = 35.7 bits (80), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 43/172 (25%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
             IA   +     L+D  TG ++A        P+                  + P S  K
Sbjct: 354 AVIANNAESGTAVLVDVQTGEILAMANAPSFNPNKRNSFKPELMRNRAITDTFEPGSTVK 413

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     +  ++       +        +++L   L+       + 
Sbjct: 414 PLVVLTALQNG----ATYRDEVISTRPFVVNGHTIKDVAPRESLSLTGILQKSSNIGVSR 469

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 470 LALRMPSTALVDTYSKVGFGKDTGLGLGEQRGTNGDRKRWSDIERATMAYGY 521


>gi|302525844|ref|ZP_07278186.1| beta-lactamase [Streptomyces sp. AA4]
 gi|302434739|gb|EFL06555.1| beta-lactamase [Streptomyces sp. AA4]
          Length = 271

 Score = 35.7 bits (80), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 24 ETNKLPYYTLLDTNTGHVIAEN-YPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
            +      +  + +G V   +  P  P+  AS+TKL+TAY     ++E    L TP
Sbjct: 11 PVDNAAAGVV--SASGEVRGRHGDPARPFRLASVTKLLTAYAAHIAIEEGVVELDTP 65


>gi|240948413|ref|ZP_04752791.1| penicillin-binding protein 3 [Actinobacillus minor NM305]
 gi|240297239|gb|EER47797.1| penicillin-binding protein 3 [Actinobacillus minor NM305]
          Length = 681

 Score = 35.7 bits (80), Expect = 9.3,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 42/172 (24%), Gaps = 25/172 (14%)

Query: 20  LSIAETNKLPYYTLLDTNTGHVIA-----ENYPDHP----------------WNPASLTK 58
                  +     L+D  TG V+A        P+                  + P S  K
Sbjct: 362 AVKENDAESGTAVLVDVTTGEVLAMANAPSFNPNKRDTFKPELMRNRAITDTFEPGSTVK 421

Query: 59  LMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSAND 118
            +             A     I  ++  +    +        +++L   L+       + 
Sbjct: 422 PLVVLTALQNG----ATYRDEIINTRPFTVNGHTIKDVSPRESLSLTGILQKSSNVGVSR 477

Query: 119 IAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDM 170
           +A+ +  +        V    +T   LG       +          T A   
Sbjct: 478 LALRMPSTALVDTYSKVGFGKDTGLGLGEQRGTNGDRKRWADIERATMAYGY 529


>gi|332363616|gb|EGJ41397.1| beta-lactamase [Streptococcus sanguinis SK1059]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|327463844|gb|EGF10160.1| beta-lactamase [Streptococcus sanguinis SK1057]
 gi|327471618|gb|EGF17061.1| beta-lactamase [Streptococcus sanguinis SK408]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|261278042|dbj|BAI44618.1| penicillin-binding protein 2X [Streptococcus agalactiae]
          Length = 752

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 44/162 (27%), Gaps = 28/162 (17%)

Query: 30  YYTLLDTNTGHVIA----------------ENYP--------DHPWNPASLTKLMTAYVV 65
             T+++  TG ++A                +           D+ + P S  K+MT    
Sbjct: 295 SATVVNAKTGEILATSQRPTYNPSTLKGYDKKNLVTYNTLLYDNFFEPGSTMKVMTLASA 354

Query: 66  FSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAE 125
                      +T +  S            +     ++  + +      + +  A  +  
Sbjct: 355 IDSKHFN----STEVYNSAQYKIADAIIRDWDVNEGLSSGSYMTFPQAFAHSSNAGMVTL 410

Query: 126 SLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
                  K++ +++    +          + G+    +  T 
Sbjct: 411 EQKMGRDKWLNYLSKFKFDYPTRFGMLHESGGLFPSDNEVTI 452


>gi|25028009|ref|NP_738063.1| hypothetical protein CE1453 [Corynebacterium efficiens YS-314]
 gi|259506400|ref|ZP_05749302.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|23493292|dbj|BAC18263.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166007|gb|EEW50561.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 342

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 13  LSNIFPFLSIAETNKLPYYTLLDTNTGHVIAE---NYPDHPWNPASLTKLMTAYVVFSFL 69
           L+ I    +   +  +  + L D   G        +     +   S+TK  TA ++   +
Sbjct: 47  LATILAEHAPPGSRNISAFILRD---GQATFAGLGSDEHTEFEIGSITKTFTADLLTRAV 103

Query: 70  KEKKAMLTTP 79
              +  L T 
Sbjct: 104 DRGELTLDTT 113


>gi|328869084|gb|EGG17462.1| beta-lactamase-type transpeptidase fold containing protein
           [Dictyostelium fasciculatum]
          Length = 342

 Score = 35.7 bits (80), Expect = 9.4,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 17/62 (27%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
           +   D  T   I     ++    AS  KL     V   ++     L T I  S       
Sbjct: 76  WAFSDFITEPFIESYNANNSQQTASTIKLWVLIAVLQDVQNGLYSLDTVIECSGQNLTIN 135

Query: 91  PS 92
             
Sbjct: 136 GC 137


>gi|332364174|gb|EGJ41951.1| beta-lactamase [Streptococcus sanguinis SK49]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|328870172|gb|EGG18547.1| beta-lactamase family protein [Dictyostelium fasciculatum]
          Length = 547

 Score = 35.7 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 2/111 (1%)

Query: 48  DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNA 107
           D+    AS+TK  T  ++F    +    L  P  ISK    +   +S   K      + A
Sbjct: 108 DNTVRIASITKTFTDLMMFQLRDKGVIALDDP--ISKYYPNFSIRDSYHTKRDITFRELA 165

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGV 158
                +         +  +   TE   ++ +      L    T   +  G+
Sbjct: 166 SHQSGLPREVPCNFDLLPTDNCTESIILERLQEHFLILPQYTTTHYSNLGM 216


>gi|148666676|gb|EDK99092.1| C-type lectin domain family 4, member f, isoform CRA_a [Mus
           musculus]
          Length = 203

 Score = 35.7 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 34/116 (29%), Gaps = 3/116 (2%)

Query: 108 LKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTA 167
            +       +  A   + +  + +   VQ  ++    +GL+          V    +  A
Sbjct: 89  WREAEKFCTSQGAHLASVTSQEEQAFLVQTTSSGDHWIGLTDQGTEGIWRWVDGTPFNNA 148

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCA 223
           +         K     + H    +   +  ++  N      ++       TG++ A
Sbjct: 149 QSKGF---WGKNQPDNWRHRNGEREDCVHVRQQWNDMACGSSYPWVCKKSTGWSAA 201


>gi|308069170|ref|YP_003870775.1| beta-lactamase precursor (Penicillinase) [Paenibacillus polymyxa
           E681]
 gi|305858449|gb|ADM70237.1| Beta-lactamase precursor (Penicillinase) [Paenibacillus polymyxa
           E681]
          Length = 303

 Score = 35.7 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 73/270 (27%), Gaps = 25/270 (9%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETNKLPYY-----------------TLLDTNTGH-VI 42
           M  FLV++            +  E                         ++DT TG  V 
Sbjct: 16  MTLFLVLLVGCTKQGASTPSTEKEPPNSNAANVVFKQLETKFDARLGVYVIDTGTGKEVT 75

Query: 43  AENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTM 102
                D  +  AS  K + A  V       +  L   I  +K+        +     + M
Sbjct: 76  Y--RADERFAYASTYKALAAGAVLQQKSNDE--LGKVIKFAKDDLVTYSPITEQHVDTGM 131

Query: 103 TLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHG 162
            L       I  S N     + ++L   E       +N    +  +         +    
Sbjct: 132 NLKEISDAAIRYSDNTAGNLLLKALGGPEGFEKAMRDNGDTVVMANRYETELNEAIPGDH 191

Query: 163 HYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGF 220
             T+  +    S+++ T      +  Q   +    +                  G KTG 
Sbjct: 192 RDTSTPNALANSFKVLTIDDSMPNDKQELLIGWLKENTTGDELIRAAVPEGWVVGDKTGA 251

Query: 221 TCASGFNIVASAIQGDQ-SLIAVILGALDR 249
                 N VA     D+  +I  ++ + D 
Sbjct: 252 GSYGTRNDVAIVWPPDRKPIIIAVMSSRDT 281


>gi|306823938|ref|ZP_07457312.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|309802389|ref|ZP_07696496.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022]
 gi|304552936|gb|EFM40849.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|308220989|gb|EFO77294.1| conserved hypothetical protein [Bifidobacterium dentium JCVIHMP022]
          Length = 334

 Score = 35.7 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 29/137 (21%), Gaps = 11/137 (8%)

Query: 30  YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEY 89
            + L+D NTG  I     D     AS  K   A  + +        L          +  
Sbjct: 111 SFVLVDINTGRAI-SYNADAQVYSASAIK---APFIMALASTGTIDLNAVYQAGDTQNAT 166

Query: 90  PPSNSTFKKGSTMTLDNALKLLIVKSA------NDIAVAIAESLCKTEKKFVQHMNNTSK 143
              N       +     +  +    +            A+  +         + M     
Sbjct: 167 TKQNIDQVLTVSDNTAYSWLVDTYGTDAFDSWAAQAGTAVQMAGYGYVTTCARDM-AKLW 225

Query: 144 NLGLSATHFMNAHGVVQ 160
             G          G   
Sbjct: 226 TQGYGFLFAQQTSGAAD 242


>gi|228945397|ref|ZP_04107752.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar monterrey BGSC 4AJ1]
 gi|228814369|gb|EEM60635.1| D-alanyl-D-alanine carboxypeptidase [Bacillus thuringiensis
          serovar monterrey BGSC 4AJ1]
          Length = 202

 Score = 35.7 bits (80), Expect = 9.6,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 38 TGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTT 78
           G VI     +     AS+ K++ A      + E K     
Sbjct: 57 NGEVITSINENKKLPLASMAKIVIAVEFAKQVSEGKISRDE 97


>gi|327467728|gb|EGF13222.1| beta-lactamase [Streptococcus sanguinis SK330]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|325695770|gb|EGD37669.1| beta-lactamase [Streptococcus sanguinis SK150]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|324991856|gb|EGC23779.1| beta-lactamase [Streptococcus sanguinis SK405]
 gi|324996254|gb|EGC28164.1| beta-lactamase [Streptococcus sanguinis SK678]
 gi|325698022|gb|EGD39903.1| beta-lactamase [Streptococcus sanguinis SK160]
 gi|327458480|gb|EGF04830.1| beta-lactamase [Streptococcus sanguinis SK1]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|324989588|gb|EGC21534.1| beta-lactamase [Streptococcus sanguinis SK353]
 gi|325686487|gb|EGD28516.1| beta-lactamase [Streptococcus sanguinis SK72]
          Length = 427

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
            +TG   A    D     AS+TKL   Y V   L +KK  L    
Sbjct: 212 LDTGKE-AGINQDQEMYSASVTKLPYLYYVQEQLDQKKLSLDQKF 255


>gi|295822151|gb|ADG36729.1| extended-spectrum class A beta-lactamase [Rahnella sp. 142-Salad]
          Length = 218

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 55/203 (27%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + KK +LT  + + K+        +       MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKESEVKKNLLTQHVGLKKSDLVNYNPITEKHLNEGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGH 163
           +       +  S N     + E L    K              L  T       +     
Sbjct: 65  IGELAAAALQYSDNTAMNKLIEHLGGPNKVTDYARTLGDNTFRLDRTEPTLNTAIPGDER 124

Query: 164 YTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFL--GADGMKTGFT 221
            TT+     LS +  T         + + +E                      G KTG  
Sbjct: 125 DTTSPRAMALSLQHATLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWIVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  L+ V 
Sbjct: 185 DYGTTNDIAVIWPENKAPLVLVT 207


>gi|229018329|ref|ZP_04175199.1| D-stereospecific peptide hydrolase [Bacillus cereus AH1273]
 gi|229024557|ref|ZP_04181002.1| D-stereospecific peptide hydrolase [Bacillus cereus AH1272]
 gi|228736622|gb|EEL87172.1| D-stereospecific peptide hydrolase [Bacillus cereus AH1272]
 gi|228742918|gb|EEL93048.1| D-stereospecific peptide hydrolase [Bacillus cereus AH1273]
          Length = 388

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 3/55 (5%)

Query: 25  TNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTP 79
                   + D +T         D+ +  AS+TK  TA  V   + E +  L  P
Sbjct: 75  KISSYNAGVADLSTKK---SMKSDYRFRIASVTKTFTATTVLQLVGENRVQLDDP 126


>gi|42782615|ref|NP_979862.1| hypothetical protein BCE_3565 [Bacillus cereus ATCC 10987]
 gi|42738541|gb|AAS42470.1| hypothetical protein BCE_3565 [Bacillus cereus ATCC 10987]
          Length = 359

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 56/213 (26%), Gaps = 17/213 (7%)

Query: 1   MRQFLVIIAMAML-----------SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDH 49
           M  F+++I+   L           +           ++     L+      V+    P+ 
Sbjct: 1   MGIFVLLISGNFLVKKVWSSNNDDAQYIASFIEEHKDEKNSALLV-KRNDKVVYSVNPNV 59

Query: 50  PWNPASLTKLMTAYVVFSFLKE-KKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNAL 108
               AS  KL    V   + K+  +  + +   +S N        +T             
Sbjct: 60  VLPVASTMKL---IVALEYTKQVTEGKIDSSSFVSINDVNRYYVPNTDGGAQDRWQRYLE 116

Query: 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTAR 168
           K   +         +A+ + K               L     +   +  +  H       
Sbjct: 117 KTGKITEGAVSLEEVAKGMVKFSSNANAEYLMEVLGLDNINRNL-QSLSLPAHQPLFPIV 175

Query: 169 DMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYP 201
               +   +  +     +  + K  E+  ++Y 
Sbjct: 176 SSLYIPGYLHKELHVPKYKIEKKLKEMSQEQYR 208


>gi|47568908|ref|ZP_00239600.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
 gi|47554392|gb|EAL12751.1| D-alanyl-D-alanine carboxypeptidase [Bacillus cereus G9241]
          Length = 369

 Score = 35.7 bits (80), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 45/176 (25%), Gaps = 6/176 (3%)

Query: 29  PYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKE-KKAMLTTPITISKNAS 87
               L+      ++    P+     AS  KL    V   + K+  +  + +   +S N  
Sbjct: 50  SSALLV-KRNDKIVYSVNPNVVLPVASTMKL---IVALEYTKQVTEGKIDSSSFVSINDV 105

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
                 +T             K   V         +A+ + K               L  
Sbjct: 106 NRYYVPNTDGGAQDRWQRYLEKTGKVTEGAVSLEEVAKGMVKFSSNANAEYLMELLGLDN 165

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNT 203
              +   +  +  H           +   +  +     +  + K  E+  ++Y   
Sbjct: 166 INRNL-QSLSLPAHQPLFPIVSSLYIPGYLHKELHVPKYKIEKKLKEMSQEQYRQY 220


>gi|303239872|ref|ZP_07326395.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
 gi|302592582|gb|EFL62307.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
          Length = 611

 Score = 35.7 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 7/68 (10%), Positives = 24/68 (35%), Gaps = 11/68 (16%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAETN--------KLPYYTLLDTNTGHVIAENYPDHPWN 52
           M++ + + ++     I P   +  +               ++++++G +      +    
Sbjct: 102 MKKIVTLASLIFCLLISPLNIVYASVDNLEDALNSADSSVVIESSSGEIPLGKDENQKNA 161

Query: 53  PASLTKLM 60
           P    K+M
Sbjct: 162 P---YKVM 166


>gi|3603441|gb|AAC35853.1| type b beta-lactamase [Staphylococcus aureus]
          Length = 244

 Score = 35.7 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 1   MRQFLVIIAMAMLSNIFPFLSIAET---------NKLPYYTLLDTNTGHVIAENYPDHPW 51
           M++ +++IA+A++ +     S             N       LDT +G    +   D  +
Sbjct: 1   MKKLILLIAIALVLSACNSTSSHAKELNNLEKKYNANIGVYALDTKSGKE-VKFNADKRF 59

Query: 52  NPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLL 111
             AS +K + + ++   +      L   + I+K+             G  +TL   ++  
Sbjct: 60  AYASTSKAINSAILLEQVPYN--KLNKKVHINKDDIVAYSPILEKYVGKDITLKELIEAS 117

Query: 112 IVKSANDIAVAIAE 125
           +  S N     I  
Sbjct: 118 MKYSDNTANNKIIN 131


>gi|295822147|gb|ADG36727.1| extended-spectrum class A beta-lactamase [Rahnella sp. 121-Celery]
 gi|295822149|gb|ADG36728.1| extended-spectrum class A beta-lactamase [Rahnella sp. 136-Carrot]
 gi|295822181|gb|ADG36744.1| extended-spectrum class A beta-lactamase [Rahnella sp. 320-Radish]
 gi|295822195|gb|ADG36751.1| extended-spectrum class A beta-lactamase [Rahnella sp. 346-Carrot]
 gi|295822199|gb|ADG36753.1| extended-spectrum class A beta-lactamase [Rahnella sp. 36-Radish]
 gi|295822205|gb|ADG36756.1| extended-spectrum class A beta-lactamase [Rahnella sp. 370-Salad]
 gi|295822209|gb|ADG36758.1| extended-spectrum class A beta-lactamase [Rahnella sp. 376-Carrot]
 gi|295822221|gb|ADG36764.1| extended-spectrum class A beta-lactamase [Rahnella sp. 401-Salad]
 gi|295822223|gb|ADG36765.1| extended-spectrum class A beta-lactamase [Rahnella sp. 51-Carrot]
 gi|295822233|gb|ADG36770.1| extended-spectrum class A beta-lactamase [Rahnella sp. 71-Salad]
 gi|295822235|gb|ADG36771.1| extended-spectrum class A beta-lactamase [Rahnella sp. 73-Celery]
 gi|295822237|gb|ADG36772.1| extended-spectrum class A beta-lactamase [Rahnella sp. 75-Radish]
 gi|295822245|gb|ADG36776.1| extended-spectrum class A beta-lactamase [Rahnella genomosp. 1]
          Length = 218

 Score = 35.7 bits (80), Expect = 9.8,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   +++ K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLKKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|295822161|gb|ADG36734.1| extended-spectrum class A beta-lactamase [Rahnella sp. 171-Carrot]
 gi|295822169|gb|ADG36738.1| extended-spectrum class A beta-lactamase [Rahnella sp. 214-Radish]
 gi|295822189|gb|ADG36748.1| extended-spectrum class A beta-lactamase [Rahnella sp. 339-Carrot]
 gi|295822229|gb|ADG36768.1| extended-spectrum class A beta-lactamase [Rahnella sp. 57-Carrot]
          Length = 218

 Score = 35.7 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 3/203 (1%)

Query: 44  ENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMT 103
               D  +   S +K M A  +    + +  +L   +++ K+        +     + MT
Sbjct: 5   AYRADERFAMCSTSKFMAASAILKQSETQTELLNRRVSLKKSDLVNYNPITEKHLDTGMT 64

Query: 104 LDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFMNAHGVVQH 161
           +       +  S N     + E L   +K  ++ + + + +  L  +      A      
Sbjct: 65  VGELAAAALQYSDNTAMNKLIEQLGGPQKVTEYARTLGDKTFRLDRTEPTLNTAIPGDDR 124

Query: 162 GHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFT 221
              +       L               Q+            +  A        G KTG  
Sbjct: 125 DTTSPRAMALSLQHVTLGSALAEPQRAQLVEWMKGNTTGAMSIRAGLPATWVVGDKTGSG 184

Query: 222 CASGFNIVASAIQGDQ-SLIAVI 243
                N +A     ++  LI + 
Sbjct: 185 DYGTTNDIAVIWPDNKAPLILIT 207


>gi|219920941|emb|CAQ76648.1| beta-lactamase [Klebsiella oxytoca]
          Length = 256

 Score = 35.7 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 55/203 (27%), Gaps = 4/203 (1%)

Query: 36  TNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNST 95
            +    +     D  +   S  K+M A  V    +    ++   + I K+        + 
Sbjct: 56  ADDSQTLY--RGDERFAMCSTGKVMAAAAVLKQSESNPEVVNKRLEIKKSDLVVWSPITE 113

Query: 96  FKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLSATHFM 153
               S MTL       +  S N     +   L   EK   F Q + + +  L  +     
Sbjct: 114 KHLQSGMTLAELSAAALQYSDNTAMNKMISYLGGPEKVTAFAQSIGDVTFRLDRTEPALN 173

Query: 154 NAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGA 213
           +A    +    T       L      +        Q+            +  A      A
Sbjct: 174 SAIPGDKRDTTTPLAMAESLRKLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAGLPASWA 233

Query: 214 DGMKTGFTCASGFNIVASAIQGD 236
            G KTG       N +A     +
Sbjct: 234 VGDKTGGGDYGTTNDIAVIWPEN 256


>gi|14029259|gb|AAK52604.1|AF294653_2 OXA-31 [Pseudomonas aeruginosa]
 gi|118132663|gb|ABK60184.1| oxacillinase [Serratia marcescens]
          Length = 276

 Score = 35.7 bits (80), Expect = 9.9,   Method: Composition-based stats.
 Identities = 24/233 (10%), Positives = 60/233 (25%), Gaps = 16/233 (6%)

Query: 4   FLVIIAMAMLSNIFPFLSIAETNKLPY--------YTLLDTNTGHVIAENY---PDHPWN 52
           F + + +A +       S   +             + L D +T   IA+           
Sbjct: 9   FAIFLIIANIIYSSASASTDISTVASPLFEGTEGCFLLYDVSTNAEIAQFNKAKCATQMP 68

Query: 53  PASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKKGSTMTLDNALKLLI 112
           P S  K+  + + F      +  +       K    +  +++         +  + ++  
Sbjct: 69  PDSTFKIALSLMAFDAEIIDQKTIFKWDKTPKGMEIWNSNHTPKTWMQFSVVWVSQEITQ 128

Query: 113 VKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFM-----NAHGVVQHGHYTTA 167
               N I   + +     +        N         +            + +  ++   
Sbjct: 129 KIGLNKIKNYLKDFDYGNQDFSGDKERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLP 188

Query: 168 RDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGF 220
              + +   I+  + Q +        +       N     G F G    K+G 
Sbjct: 189 VKNSAIENTIENMYLQDLENSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGH 241


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.109    0.266 

Lambda     K      H
   0.267   0.0333    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,561,293,382
Number of Sequences: 14124377
Number of extensions: 55917196
Number of successful extensions: 253312
Number of sequences better than 10.0: 7746
Number of HSP's better than 10.0 without gapping: 6045
Number of HSP's successfully gapped in prelim test: 1701
Number of HSP's that attempted gapping in prelim test: 240832
Number of HSP's gapped (non-prelim): 8106
length of query: 336
length of database: 4,842,793,630
effective HSP length: 139
effective length of query: 197
effective length of database: 2,879,505,227
effective search space: 567262529719
effective search space used: 567262529719
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.7 bits)